BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037409
         (603 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 292/588 (49%), Positives = 388/588 (65%), Gaps = 11/588 (1%)

Query: 19  RCNFWCSFGRPPNPKTDLSSHHFKDGTS-------IAKFLNDRHKSGNITSNEAVYFFDC 71
           RC     F  P  P +       KD  S       +  FL    KSG+I  +EA   F+ 
Sbjct: 23  RCKLSSLFEHPHRPISPGPISLTKDTVSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNH 82

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           +I M+P+P ++SF  LL  +AK K+Y  V+SL+KR++  GL PD   LN+LINC C +  
Sbjct: 83  LIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNK 142

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
                 VLG +LR   +PNTVTF  L+ GLC   RI EA  L +K+      PNVVT+ T
Sbjct: 143 VDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGT 202

Query: 192 LINGLCRTRNTLVALKLFEEMVNE---FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           L+NGLC T NT++A+KL EEM+N    FG   KP++V Y +IID LCKDG +DK KEL L
Sbjct: 203 LLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFL 262

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK R I+P+V+ Y+S+I G C    W+ AK LF EM+D GV P+VVTFN +I+  CK G
Sbjct: 263 EMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAG 322

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           KM++ N LL+LMIQRG +PDT TYN+L+DGFCL GRI  AR+LFVSM SKG   D  SYN
Sbjct: 323 KMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYN 382

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           +LIN  CK  ++ +A  LYREM+ + I P+VITYNTLL+GLF+ G + DA  L  +M+++
Sbjct: 383 VLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVH 442

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
           D+ P+S T+   +DGLCKN  + EA+++F  + N   +  I+ +NCLI+GLCK  +++ A
Sbjct: 443 DLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIA 502

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +LF+RL H+G  P+V+T + MIH LCK GQ++ A DL L ME K C P+ VTF TL+RG
Sbjct: 503 RELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRG 562

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           F QN++  KVV LL +M AEK    D S  S VVDLLSKD+KYRE L+
Sbjct: 563 FCQNDEMQKVVELLQEM-AEKDFSPDASTISIVVDLLSKDEKYREYLH 609



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 126/242 (52%), Gaps = 3/242 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+ +L+    K+ +      L++ +    + P +   N L+  L + G    A+ + G +
Sbjct: 380 SYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEM 439

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                TP + T+N L++GLC    + EA  LF  L      P++  FN LI+GLC+ R  
Sbjct: 440 KVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKI 499

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            +A +LF  + +E     +P+V+TY  +I GLCK G ++ AK+L L M+++   PN++T+
Sbjct: 500 EIARELFNRLSHEG---LEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTF 556

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N+L+ GFC  D+ ++   L  EM +    PD  T + +++   KD K  +   LL     
Sbjct: 557 NTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPA 616

Query: 323 RG 324
           +G
Sbjct: 617 QG 618


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/555 (49%), Positives = 384/555 (69%), Gaps = 7/555 (1%)

Query: 46  SIAKFLNDRH-KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
            IA FL  RH K+GN+T+  A++FF  M++  P+P ++SF  LL+ LAK K Y  V SL+
Sbjct: 35  QIAFFL--RHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLY 92

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
            ++  +GL  D   LN+L+NCLC +      F     ILR  ++PN VT+N LI GLC E
Sbjct: 93  NQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCME 152

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI---CK 221
            RI EA RLF ++    C P+VVT+ TLI GLC T N  +ALKL +EM+N+       CK
Sbjct: 153 HRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCK 212

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+V+TYN I+DGLCK G  D+AK+L  +MK + + P++I+YNSLI GFCC   W+E+K L
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRL 272

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             EM+D G+QPD+VTFN +I+  CK+GK+ +  +LL +MI+ G+ PD VTYNSL++GFC+
Sbjct: 273 LDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM 332

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           VG ++ ARELFVSM SKGC  DV SYN+LIN   K  KVE+A+ LY EML    RP+VIT
Sbjct: 333 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y++LL G+F  G + DA KL   M+ + +  +S+T+  ++DGLCKN  + EA+++F  ++
Sbjct: 393 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +   +L IE  NCLI+GLCK G+L+TA +LF +L ++G  P+VVT + MIH  C+EGQ+D
Sbjct: 453 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 512

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           KAN L+  MEA  C P  +T+ TL+RGF ++NK  +VV LLH+M A+K V  D    S V
Sbjct: 513 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRM-AQKDVSPDAITCSIV 571

Query: 582 VDLLSKDKKYRECLN 596
           VD+LSKD+KY+ECL+
Sbjct: 572 VDMLSKDEKYQECLH 586



 Score = 38.9 bits (89), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 28/147 (19%), Positives = 67/147 (45%), Gaps = 3/147 (2%)

Query: 34  TDLSSHHFK-DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLA 92
           T+L S +FK +  ++   ++   K+G + +  A   F+ +      P + ++TI++    
Sbjct: 449 TELKSSNFKLEIENLNCLIDGLCKAGKLET--AWELFEKLSNEGHEPNVVTYTIMIHGFC 506

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           +  Q D    L +++ +NG  PD+   N L+    +         +L R+ +   +P+ +
Sbjct: 507 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 566

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNV 179
           T + +++ L  + +  E   L  +  +
Sbjct: 567 TCSIVVDMLSKDEKYQECLHLLPRFPI 593


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 274/573 (47%), Positives = 376/573 (65%), Gaps = 26/573 (4%)

Query: 30  PNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLT 89
           PN ++D           + +FL    KSG+ T +EA++FF+ MI M+ +P ++ F  L  
Sbjct: 65  PNTQSD---------NPLEQFLEINCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFG 115

Query: 90  MLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP 149
            LAK KQY  V+S+  R+NS GL  +   LN+L+NCLC +      FVV G ILR  + P
Sbjct: 116 ALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRP 175

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           NT TF  L+ GLC EG+I EA R+FK + VF C P+ +T   LI+GLCRT NT  ALKL 
Sbjct: 176 NTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLH 235

Query: 210 EEMVN---EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           E M+N   +FG  CKP VV+Y+ IID LCKDG V++AKE  ++MK++ I PNV+TY SL+
Sbjct: 236 EAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLL 295

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C   +W+EAK LFIEM+D+G+ PDVVTF+ +I   CK GK+ + + L +LM+QR V 
Sbjct: 296 HGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVE 355

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P T TYN L++G+CL G +   +++F+SMV+K C+HD  SY+IL+ A CKD +V  A+ L
Sbjct: 356 PSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMIL 415

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA---TYIDG 443
           YREM+   I+P+VITY+           +GDA KL  ++Q  D+V DS +++    Y+DG
Sbjct: 416 YREMMDRGIQPTVITYS----------KVGDARKLFGEIQFQDMVLDSISYSIYNVYLDG 465

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LCKNG V EA+ VF  + NCK    +  +N LING+C+  +L+ A +LF+RL ++   PD
Sbjct: 466 LCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPD 525

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           VVT + MI+ LCK GQ  KA DL L+ME K C P+ VTF TL+RG   N+++ K+V LLH
Sbjct: 526 VVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLH 585

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           KMAA KL   D S    V+D+L KD+ Y ECLN
Sbjct: 586 KMAARKL-SPDASTLLIVMDILLKDENYHECLN 617


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 273/574 (47%), Positives = 375/574 (65%), Gaps = 17/574 (2%)

Query: 30  PNP-------KTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMT 82
           PNP       + ++S HH      ++ FL +  K+GNIT+ +A +FFD M++  P P ++
Sbjct: 39  PNPILPAAFNREEISFHH-----PLSLFLRNC-KTGNITAIQAFHFFDLMMRSHPIPPIS 92

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           SF  LL  LAK   Y  + SL+  +   GL PDLF L++L NCLC +   S A   +  I
Sbjct: 93  SFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGI 152

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           LR  + PN VT+  LI GLC E RI EA RLF ++    C PN VT+ TLI GLC+T N 
Sbjct: 153 LRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNV 212

Query: 203 LVALKLFEEMVN---EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
            +ALKL +EM+N   ++G  CKP V+TY+ IIDGLCK G  D+AKEL  +MK + + P+V
Sbjct: 213 NIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDV 272

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           I+Y++LI GFCC   W ++K LF EM+D GVQPD+VTF+ +I+  CK+GK+ +  +LLE+
Sbjct: 273 ISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEV 332

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           MIQRG+ P+ +TYNSL+DGFC+VG ++ ARELF+SM SKG   D  SY  LIN  CK  K
Sbjct: 333 MIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWK 392

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           V++A+ LY EML     P+V TY TLL GLFQ G +GDA KL   M+   V  +S  +  
Sbjct: 393 VKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGI 452

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
           ++DGLCKN  + EA+++F  +++   +L IE Y+CLI+GLCK G+L+TA +LF +L  +G
Sbjct: 453 FLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEG 512

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             PDVVT + MIH  CK GQ+D AN L   ME   C P  + + TLL GF + NK  +V+
Sbjct: 513 LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVI 572

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            LLHKM  +K V  + +  + VVD+L KD+KY++
Sbjct: 573 KLLHKM-VQKDVSPNAASCTIVVDMLCKDEKYKK 605



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 249/471 (52%), Gaps = 9/471 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+     +++    P + ++T L+  L    +      LF R+   G  P+      L
Sbjct: 143 SEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTL 202

Query: 123 INCLCKMGITSGAFVVLGRILRSCFT------PNTVTFNFLINGLCAEGRIMEAARLFKK 176
           I  LC+ G  + A  +   +L           P  +T++ +I+GLC  GR  EA  LF++
Sbjct: 203 IKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEE 262

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P+V++++TLI+G C       +  LF+EMV++     +PD+VT++ +ID LCK
Sbjct: 263 MKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG---VQPDMVTFSVLIDTLCK 319

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +G V +AK+LL  M  R I PN+ITYNSLI GFC V D   A+ LF+ M   G++PD ++
Sbjct: 320 EGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEIS 379

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +IN  CK  K+ +   L   M+Q G +P+  TY +L+ G    G++  A++LF  M 
Sbjct: 380 YTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMK 439

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           + G   +   Y I ++  CK+  + +A+ L+ E+ S   + ++  Y+ L+ GL + G L 
Sbjct: 440 TYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLE 499

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A +L +K+    + PD  T+   I G CK G V  A  +F+ +    C   I  YN L+
Sbjct: 500 TAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLL 559

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            G C+  +L+   KL H++  K   P+  +C+ ++  LCK+ +  K  DLL
Sbjct: 560 CGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 610


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/539 (47%), Positives = 356/539 (66%), Gaps = 11/539 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GNIT+ +A  FF  M+   P+P ++SFT LL+ LAK K Y  V  L+ ++  +G+ PD
Sbjct: 71  KTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPD 130

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
              LN+L+NCLC +        V+  ILR  + P+ VT+  LI GLC E RI +AA LF 
Sbjct: 131 CCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFT 190

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---FGAICKPDVVTYNSIID 232
           ++    C PN +T+ TL+ GLCRT N  +ALKL +EM+N+   +G   KP V++Y+ IID
Sbjct: 191 RMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIID 250

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
            LCKD   D+A++L  +MK + + P VI+Y SLI GFCC   W+EAK LF EM++ GVQP
Sbjct: 251 ALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQP 310

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +VVTFN +I+  CK+GK+ +   LLE+MIQRG+ P+ +TYNSL++GFCLVG ++ ARELF
Sbjct: 311 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 370

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
           VSM SKGC  DV  Y +LIN  CK  KVE+A+ LY  ML    RP V TY  LL+GLFQ 
Sbjct: 371 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQG 430

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G +GDA KL   M++  +  D + +  +++GLCKNG + EA+++F  +++   +L IE +
Sbjct: 431 GKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECF 490

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           NCLI+GLCK G+L+TA +LF +L  +   PDVVT + MIH  C+ GQ+ KAN L   ME 
Sbjct: 491 NCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEK 550

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
             C P ++T+ TL+RGF ++ K  KVV LLH M     V  D+SL    V++L  ++++
Sbjct: 551 NGCTPDKITYATLIRGFFESKKLEKVVELLHMM-----VQRDVSLD---VNILRHNRRH 601


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 249/539 (46%), Positives = 352/539 (65%), Gaps = 19/539 (3%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GNIT+ +A  FF  M+   P+P ++SFT LL+ LAK K Y  V  L+ ++  +G+ PD
Sbjct: 71  KTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPD 130

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
              LN+L+NCLC +        V+  ILR  + P+ VT+  LI GLC E RI +AA LF 
Sbjct: 131 CCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFT 190

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---FGAICKPDVVTYNSIID 232
           ++    C PN +T+ TL+ GLCRT N  +ALKL +EM+N+   +G   KP V++Y+ IID
Sbjct: 191 RMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIID 250

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
            LCKD   D+A++L  +MK + + P VI+Y SL+        W+EAK LF EM++ GVQP
Sbjct: 251 ALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQP 302

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +VVTFN +I+  CK+GK+ +   LLE+MIQRG+ P+ +TYNSL++GFCLVG ++ ARELF
Sbjct: 303 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 362

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
           VSM SKGC  DV  Y +LIN  CK  KVE+A+ LY  ML    RP V TY  LL+GLFQ 
Sbjct: 363 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQG 422

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G +GDA KL   M++  +  D + +  +++GLCKNG + EA+++F  +++   +L IE +
Sbjct: 423 GKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECF 482

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           NCLI+GLCK G+L+TA +LF +L  +   PDVVT + MIH  C+ GQ+ KAN L   ME 
Sbjct: 483 NCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEK 542

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
             C P ++T+ TL+RGF ++ K  KVV LLH M     V  D+SL    V++L  ++++
Sbjct: 543 NGCTPDKITYATLIRGFFESKKLEKVVELLHMM-----VQRDVSLD---VNILRHNRRH 593


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 247/568 (43%), Positives = 344/568 (60%), Gaps = 58/568 (10%)

Query: 46  SIAKFLNDRH-KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
            IA FL  RH K+GN+T+  A++FF  M++  P+P ++SF  LL+ LAK K Y       
Sbjct: 35  QIAFFL--RHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHY------- 85

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
                                       S  F +  ++  S  + +  T N L+N LC  
Sbjct: 86  ----------------------------SQVFSLYNQMRLSGLSSDRCTLNILLNCLCNV 117

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
            R+ E    F  +      PN+VT+NTLI GLC       A +LF  M  + G  C PDV
Sbjct: 118 NRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM-QKLG--CTPDV 174

Query: 225 VTYNSIIDGLCKDGFVDKA----KELLLQMKDRNIN--PNVITYNSLICGFCCVDDWKEA 278
           VTY ++I GLC  G ++ A    +E+L  +    IN  PNVITYN ++ G C V    EA
Sbjct: 175 VTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEA 234

Query: 279 KCLFIEM----------MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           K LF EM          +D G+QPD+VTFN +I+  CK+GK+ +  +LL +MI+ G+ PD
Sbjct: 235 KQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPD 294

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            VTYNSL++GFC+VG ++ ARELFVSM SKGC  DV SYN+LIN   K  KVE+A+ LY 
Sbjct: 295 LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYN 354

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EML    RP+VITY++LL G+F  G + DA KL   M+ + +  +S+T+  ++DGLCKN 
Sbjct: 355 EMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKND 414

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EA+++F  +++   +L IE  NCLI+GLCK G+L+TA +LF +L ++G  P+VVT +
Sbjct: 415 CLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYT 474

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            MIH  C+EGQ+DKAN L+  MEA  C P  +T+ TL+RGF ++NK  +VV LLH+M A+
Sbjct: 475 IMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRM-AQ 533

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           K V  D    S VVD+LSKD+KY+ECL+
Sbjct: 534 KDVSPDAITCSIVVDMLSKDEKYQECLH 561


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 219/528 (41%), Positives = 320/528 (60%), Gaps = 4/528 (0%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T ++A+  F+ ++ M P P +  F  LLT +AK K Y TV+SL  +++S G+ P+++ LN
Sbjct: 36  TLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN 95

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +LIN  C +     AF VL +IL+    P+  TF  LI GLC EG+I EA  LF K+   
Sbjct: 96  ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 155

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              PNVVT+ TLINGLC+  NT  A++L   M  E G  C+PDVV Y SIID LCKD  V
Sbjct: 156 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM--EQGN-CQPDVVIYTSIIDSLCKDRQV 212

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  L  QM  + I+P++ TY SL+   C + +WK    L  +M+++ + PDVV F+ +
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+GK+ + + ++++MIQRGV PD VTY +LMDG CL   +  A ++F  MV KG 
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             DV SY  LIN  CK  K++ A+ L+ EM  +   P   TYNTL+ GL  VG L DA+ 
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M     +PD  T++  +D LCKN  + EA+ + +AI        I+ YN +I+G+C
Sbjct: 393 LFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 452

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G L+ A  LF  L  KG  P V T + MIH LCK G +++AN L ++M+  +C P   
Sbjct: 453 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGC 512

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           T+ T+ RGF+QNN+  + + LL +M A     +D+S ++ +V++LS D
Sbjct: 513 TYNTIARGFLQNNETLRAIQLLEEMLARGF-SADVSTTTLLVEMLSDD 559



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 179/365 (49%), Gaps = 32/365 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F  M+    SP + ++T L+  L    ++  V +L  ++ ++ + PD+ + + ++
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 273

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G  + A  ++  +++    P+ VT+  L++G C +  + EA ++F  +      
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------FGAICK---------- 221
           P+V+++ TLING C+      A+ LFEEM  +               +C           
Sbjct: 334 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIAL 393

Query: 222 ----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
                     PD+VTY+ ++D LCK+  +++A  LL  ++  N+NP++  YN +I G C 
Sbjct: 394 FHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCR 453

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
             + + A+ LF  +   G+ P V T+N MI+  CK G +++ N+L   M     +PD  T
Sbjct: 454 AGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCT 513

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YN++  GF       RA +L   M+++G   DV +  +L+     D   + +  L   +L
Sbjct: 514 YNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSVL 573

Query: 392 SERIR 396
           SE  R
Sbjct: 574 SEDDR 578



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 1/231 (0%)

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           +  +  L+ +  K +     + L  +M S  + P+V T N L++    +  +G A  ++ 
Sbjct: 56  IVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLA 115

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           K+      PD  TF T I GLC  G + EA+ +F  + +   +  + TY  LINGLCK+G
Sbjct: 116 KILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVG 175

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
               A +L   ++     PDVV  +++I  LCK+ Q+ +A +L   M  +   P   T+ 
Sbjct: 176 NTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYT 235

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           +L+       +   V  LL++M   K ++ D+ + S VVD L K+ K  E 
Sbjct: 236 SLVHALCNLCEWKHVTTLLNQMVNSK-ILPDVVIFSTVVDALCKEGKVTEA 285



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 36/223 (16%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           ++DA+  +  +L     PS++ +  LL+ + ++ +    L L  +M    V P+ +T   
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+  C    V  A  V   I     +    T+  LI GLC  G++  A  LF ++  +G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P+VVT  T+I+ LCK G    A                     LLR   Q N +  VV
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAA-------------------IRLLRSMEQGNCQPDVV 197

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +                  + ++D L KD++  E  N F  ++
Sbjct: 198 IY-----------------TSIIDSLCKDRQVTEAFNLFSQMV 223


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/507 (41%), Positives = 305/507 (60%), Gaps = 3/507 (0%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T ++A+  F+ ++ M P P +  F  LLT +AK K Y TV+SL  +++S G+ P+++ LN
Sbjct: 45  TLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN 104

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +LIN  C +     AF VL +IL+    P+  TF  LI GLC EG+I EA  LF K+   
Sbjct: 105 ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 164

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              PNVVT+ TLINGLC+  NT  A++L   M       C+PDVV Y SIID LCKD  V
Sbjct: 165 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ---GNCQPDVVIYTSIIDSLCKDRQV 221

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  L  QM  + I+P++ TY SL+   C + +WK    L  +M+++ + PDVV F+ +
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 281

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+GK+ + + ++++MIQRGV PD VTY +LMDG CL   +  A ++F  MV KG 
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             DV SY  LIN  CK  K++ A+ L+ EM  +   P   TYNTL+ GL  VG L DA+ 
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M     +PD  T++  +D LCKN  + EA+ + +AI        I+ YN +I+G+C
Sbjct: 402 LFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 461

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G L+ A  LF  L  KG  P V T + MIH LCK G +++AN L ++M+  +C P   
Sbjct: 462 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGC 521

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           T+ T+ RGF+QNN+  + + LL +M A
Sbjct: 522 TYNTIARGFLQNNETLRAIQLLEEMLA 548



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 36/223 (16%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           ++DA+  +  +L     PS++ +  LL+ + ++ +    L L  +M    V P+ +T   
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+  C    V  A  V   I     +    T+  LI GLC  G++  A  LF ++  +G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P+VVT  T+I+ LCK G    A  LL  ME  NC P                      
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP---------------------- 203

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                         D+ + + ++D L KD++  E  N F  ++
Sbjct: 204 --------------DVVIYTSIIDSLCKDRQVTEAFNLFSQMV 232


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/528 (40%), Positives = 323/528 (61%), Gaps = 4/528 (0%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T +EA+  F+ M+  +P P    F  LLT +AK K + T++SL ++++S G+ PD++ L 
Sbjct: 50  TLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLA 109

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           ++IN LC +     AF  L +IL+    P+  TF  LI GLC EG+I EA  LF K+   
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              PNVVT+ TLINGLC+  NT  A++L   M  E G  C+P+VV ++++ID LCKD  V
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM--EQGN-CQPNVVVFSTLIDSLCKDRQV 226

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  +  +M  + I+PN++TYNSLI G C + +WK    L  EM+D+ + PDV T N +
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+G + + + ++++MI RGV P+ VTYN+LMDG CL   +  A ++F +MV K C
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V SYN LIN  CK Q V+ A+ L+ EM  + + P+ +TYNTL+ GL  VG L DA+ 
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M     +PD  T+ T  D LCKN  + +A+ + +AI     +  I+ Y  +++G+C
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G L+ A  LF  L  KG  P+V T + MIH LCK+G + +A+ L  +M    C P++ 
Sbjct: 467 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           T+  + RGF++NN+  + + LL +M A    V D+S ++ +V +LS D
Sbjct: 527 TYNLITRGFLRNNEALRTIELLEEMLARGFSV-DVSTTTLLVGMLSDD 573


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/528 (40%), Positives = 323/528 (61%), Gaps = 4/528 (0%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T +EA+  F+ M+  +P P    F  LLT +AK K + T++SL ++++S G+ PD++ L 
Sbjct: 50  TLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLA 109

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           ++IN LC +     AF  L +IL+    P+  TF  LI GLC EG+I EA  LF K+   
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              PNVVT+ TLINGLC+  NT  A++L   M  E G  C+P+VV ++++ID LCKD  V
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM--EQGN-CQPNVVVFSTLIDSLCKDRQV 226

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  +  +M  + I+PN++TYNSLI G C + +WK    L  EM+D+ + PDV T N +
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+G + + + ++++MI RGV P+ VTYN+LMDG CL   +  A ++F +MV K C
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V SYN LIN  CK Q V+ A+ L+ EM  + + P+ +TYNTL+ GL  VG L DA+ 
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M     +PD  T+ T  D LCKN  + +A+ + +AI     +  I+ Y  +++G+C
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G L+ A  LF  L  KG  P+V T + MIH LCK+G + +A+ L  +M    C P++ 
Sbjct: 467 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           T+  + RGF++NN+  + + LL +M A    V D+S ++ +V +LS D
Sbjct: 527 TYNLITRGFLRNNEALRTIELLEEMLARGFSV-DVSTTTLLVGMLSDD 573



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 125/289 (43%), Gaps = 38/289 (13%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D MI     P + ++  L+       + D  V +F  +       ++   N LI
Sbjct: 298 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 357

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  CK+     A  +   + R   TPNTVT+N LI+GLC  GR+ +A  LF ++      
Sbjct: 358 NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 417

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++VT+ TL + LC+ R+   A+ L + +    G+   PD+  Y +I+DG+C+ G ++ A
Sbjct: 418 PDLVTYRTLSDYLCKNRHLDKAMALLKAIE---GSNWDPDIQIYTTILDGMCRAGELEDA 474

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-------------- 289
           ++L   +  + + PNV TYN +I G C      EA  LF EM  NG              
Sbjct: 475 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 534

Query: 290 ---------------------VQPDVVTFNAMINYNCKDGKMDKVNRLL 317
                                   DV T   ++     DG    V ++L
Sbjct: 535 FLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/541 (39%), Positives = 326/541 (60%), Gaps = 7/541 (1%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T ++A+  F+ M+ M P P    F  LLT +AK KQY TV SL  +++S G+ PD++ LN
Sbjct: 47  TLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLN 106

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +LIN  C +     AF VL +IL+    P+T TF  LI GLC EG+I +A  LF K+   
Sbjct: 107 ILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 166

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              PNVVT+ TLINGLC+  NT  A++L   M  E G  C+PDVV Y SIID LCKD  V
Sbjct: 167 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM--EQGN-CQPDVVVYTSIIDSLCKDRQV 223

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  L  +M  + I+P++ TY SLI   C + +WK    L  +M+++ + PDVV F+ +
Sbjct: 224 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 283

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+GK+ + + ++++MI RGV P+ VTYN+LMDG CL   +  A ++F +MV  G 
Sbjct: 284 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 343

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V SYN LIN  CK Q+++ A  L+ EM  + + P+ +TYNTL+ GL  VG L DA+ 
Sbjct: 344 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIA 403

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M  +  +PD  T+   +D LCK   + EA+ + + I     +  I+ Y  +I+G+C
Sbjct: 404 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMC 463

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G L+ A  +F  L  KG  P+V T + MI+ LC+ G +D+AN L ++M+   C P   
Sbjct: 464 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC 523

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK---KYRECLNQ 597
           T+ T+ +G +QN +  + + LL +M A     +D+S ++ +V++L  DK     ++ L++
Sbjct: 524 TYNTITQGLLQNKEALRAIQLLQEMLARGF-SADVSTTTLLVEMLCDDKLDQSVKQILSE 582

Query: 598 F 598
           F
Sbjct: 583 F 583



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 3/260 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  FD M+    +P + S+  L+    K ++ D    LF+ +    L P+    N L
Sbjct: 329 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 388

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LC +G    A  +   ++     P+  T+  L++ LC +  + EA  L K +     
Sbjct: 389 MHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 448

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           DP++  +  +I+G+CR      A  +F  + ++     +P+V TY  +I+GLC+ G +D+
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG---LRPNVRTYTIMINGLCRRGLLDE 505

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L ++M     +P+  TYN++  G     +   A  L  EM+  G   DV T   ++ 
Sbjct: 506 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 565

Query: 303 YNCKDGKMDKVNRLLELMIQ 322
             C D     V ++L   +Q
Sbjct: 566 MLCDDKLDQSVKQILSEFVQ 585


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 221/558 (39%), Positives = 339/558 (60%), Gaps = 13/558 (2%)

Query: 50  FLNDRH-----KSGNI-TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL 103
           FL+  H     KS N  T ++A+  F+ M+ M P P +  FT LL  + K K Y TV+SL
Sbjct: 31  FLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSL 90

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
             +++S G+ P+++ LN+LIN  C +     AF VL +IL+    PN  TFN LI GLC 
Sbjct: 91  SHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCV 150

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           EG+I E   LF K+      PNVVT+ TLINGLC+  +T  A++L   M  E G  C+PD
Sbjct: 151 EGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM--EQGN-CQPD 207

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           VV Y SIID LCKD  V +A  L  +M  + I+P++ TYNSLI   C + +WK    L  
Sbjct: 208 VVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLN 267

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM+++ + P+VV F+ +++  CK+GK+ + + ++++MI+RGV P+ VTYN+LMDG CL  
Sbjct: 268 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS 327

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            +  A ++F +MV KG   DV SY+ LIN  CK Q++E A+ L+ EM  + + P+ +TY+
Sbjct: 328 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 387

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL+ GL  VG L DA+ L  +M     +PD  ++   +D LCKN  + EA+ + +AI   
Sbjct: 388 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 447

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +  I+ Y  +I+G+C+ G L+ A  LF  L  KG  P+V T + MI+ LC++G + +A
Sbjct: 448 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEA 507

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           + L  +M+ K   P+  T+  + RGF++NN+  + + LL +M A     +D+S S+ +V+
Sbjct: 508 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGF-SADVSTSTVLVE 566

Query: 584 LLSK---DKKYRECLNQF 598
           +LS    D+  ++ L++F
Sbjct: 567 MLSDDGLDQSVKQILSEF 584



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 3/260 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  FD M+    +P + S++ L+    K ++ +  + LF+ +    L P+    + L
Sbjct: 330 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 389

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LC +G    A  +   ++     P+ V++  L++ LC   R+ EA  L K +     
Sbjct: 390 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 449

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           DP++  +  +I+G+CR      A  LF  + ++      P+V TY  +I+GLC+ G + +
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG---LHPNVWTYTIMINGLCQQGLLAE 506

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +MK +  +PN  TYN +  GF   ++      L  EM+  G   DV T   ++ 
Sbjct: 507 ASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVE 566

Query: 303 YNCKDGKMDKVNRLLELMIQ 322
               DG    V ++L   +Q
Sbjct: 567 MLSDDGLDQSVKQILSEFLQ 586



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 36/237 (15%)

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           S+N   + +     ++DA+  +  ML     PS+  +  LL  + ++ +    L L  +M
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
               + P+ +T    I+  C    +  A  V   I     +  I T+N LI GLC  G++
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
                LF ++  +G  P+VVT  T+I+ LCK G    A  LL  ME  NC P  V +   
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVY--- 211

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                                            + ++D L KD++  +  N F  ++
Sbjct: 212 ---------------------------------TSIIDSLCKDRQVTQAFNLFSEMI 235


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 221/558 (39%), Positives = 339/558 (60%), Gaps = 13/558 (2%)

Query: 50  FLNDRH-----KSGNI-TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL 103
           FL+  H     KS N  T ++A+  F+ M+ M P P +  FT LL  + K K Y TV+SL
Sbjct: 22  FLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSL 81

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
             +++S G+ P+++ LN+LIN  C +     AF VL +IL+    PN  TFN LI GLC 
Sbjct: 82  SHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCV 141

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           EG+I E   LF K+      PNVVT+ TLINGLC+  +T  A++L   M  E G  C+PD
Sbjct: 142 EGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM--EQGN-CQPD 198

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           VV Y SIID LCKD  V +A  L  +M  + I+P++ TYNSLI   C + +WK    L  
Sbjct: 199 VVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLN 258

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM+++ + P+VV F+ +++  CK+GK+ + + ++++MI+RGV P+ VTYN+LMDG CL  
Sbjct: 259 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS 318

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            +  A ++F +MV KG   DV SY+ LIN  CK Q++E A+ L+ EM  + + P+ +TY+
Sbjct: 319 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 378

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL+ GL  VG L DA+ L  +M     +PD  ++   +D LCKN  + EA+ + +AI   
Sbjct: 379 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 438

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +  I+ Y  +I+G+C+ G L+ A  LF  L  KG  P+V T + MI+ LC++G + +A
Sbjct: 439 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEA 498

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           + L  +M+ K   P+  T+  + RGF++NN+  + + LL +M A     +D+S S+ +V+
Sbjct: 499 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGF-SADVSTSTVLVE 557

Query: 584 LLSK---DKKYRECLNQF 598
           +LS    D+  ++ L++F
Sbjct: 558 MLSDDGLDQSVKQILSEF 575



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 3/260 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  FD M+    +P + S++ L+    K ++ +  + LF+ +    L P+    + L
Sbjct: 321 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 380

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LC +G    A  +   ++     P+ V++  L++ LC   R+ EA  L K +     
Sbjct: 381 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 440

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           DP++  +  +I+G+CR      A  LF  + ++      P+V TY  +I+GLC+ G + +
Sbjct: 441 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG---LHPNVWTYTIMINGLCQQGLLAE 497

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +MK +  +PN  TYN +  GF   ++      L  EM+  G   DV T   ++ 
Sbjct: 498 ASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVE 557

Query: 303 YNCKDGKMDKVNRLLELMIQ 322
               DG    V ++L   +Q
Sbjct: 558 MLSDDGLDQSVKQILSEFLQ 577



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 36/237 (15%)

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           S+N   + +     ++DA+  +  ML     PS+  +  LL  + ++ +    L L  +M
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
               + P+ +T    I+  C    +  A  V   I     +  I T+N LI GLC  G++
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
                LF ++  +G  P+VVT  T+I+ LCK G    A  LL  ME  NC P  V +   
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVY--- 202

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                                            + ++D L KD++  +  N F  ++
Sbjct: 203 ---------------------------------TSIIDSLCKDRQVTQAFNLFSEMI 226


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/541 (39%), Positives = 327/541 (60%), Gaps = 7/541 (1%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T + A+  F+ M++M+P P    F  LLT +AK K + T++SL  +++S G+ P+++ L+
Sbjct: 41  TIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLH 100

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +LIN  C +     AF VL +IL+    P+T TF  LI G+  EG+I EA  LF K+   
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGE 160

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+VVT+ TLINGLC+  NT  A++L   MV +    C+P+V  YN+IID LCKD  V
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN---CQPNVFAYNTIIDSLCKDRQV 217

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  L  +M  + I+P++ TYNSLI   C + +WK    L  EM+D+ + PDVV+FN +
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+GK+ + + +++ MIQRGV P+ VTY +LMDG CL+  +  A ++F +MV KGC
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V SYN LIN  CK Q+++ A+ L+ EM  + + P  +TY+TL+ GL  V  L DA+ 
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIA 397

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M     +P+  T+   +D LCKN ++ EA+ + +AI     +  I+  N  I+G+C
Sbjct: 398 LFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMC 457

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G L+ A  LF  L  KG  PDV T S MI+ LC+ G +D+A+ L  +M+   C  +  
Sbjct: 458 RAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGC 517

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYRECLNQ 597
            + T+ RGF++NN+ S+ + LL +M A     +D S  +  V +LS    D+  ++ L +
Sbjct: 518 IYNTITRGFLRNNETSRAIQLLQEMVARGF-SADASTMTLFVKMLSDDGLDQSLKQILRE 576

Query: 598 F 598
           F
Sbjct: 577 F 577



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 34/299 (11%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +T  EA    D MI+    P + ++T L+       + D  V +F  +   G  P+
Sbjct: 283 KEGKVT--EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N LIN  CK+     A  + G + R    P+TVT++ LI+GLC   R+ +A  LF 
Sbjct: 341 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 400

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM----------VNEFG--AICK-- 221
           ++   +  PN+VT+  L++ LC+ R    A+ L + +          VN      +C+  
Sbjct: 401 EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 460

Query: 222 ------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
                             PDV TY+ +I+GLC+ G +D+A +L  +M +     N   YN
Sbjct: 461 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYN 520

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           ++  GF   ++   A  L  EM+  G   D  T    +     DG    + ++L   +Q
Sbjct: 521 TITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/560 (38%), Positives = 338/560 (60%), Gaps = 23/560 (4%)

Query: 39  HHFKDGTSIAKFLND-------------RHKSGNITS-----NEAVYFFDCMIKMKPSPG 80
           H   D +S  +++ND             R K  N  S     ++A+ +F+ M+  KP P 
Sbjct: 61  HKNDDASSSFRYINDALAFFSSSSSISSRDKHQNDASSFRNIDDALAYFNHMLHRKPRPC 120

Query: 81  MTSFTILLTMLAKNKQY-DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
           +  F  LL+ + K + Y D V+SL K++   GL PD + L++LINC  ++      F VL
Sbjct: 121 IIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVL 180

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
            +I++       VTFN LINGLC  G+  +A  LF  +      P+V T+ T+INGLC+ 
Sbjct: 181 AKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKI 240

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
             T+ A  LF +M  E G  C+PDVVTY++IID LCKD  V++A ++   MK + I+PN+
Sbjct: 241 GETVAAAGLFRKM-GEAG--CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNI 297

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
            TYNSLI G C    W+EA  +  EMM   + P++VTF+ +IN  CK+G + +   +L+ 
Sbjct: 298 FTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKT 357

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M + GV P+ VTY+SLM+G+ L   +  AR+LF  M++KGC+ DV+SYNILIN  CK ++
Sbjct: 358 MTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           + +A  L+ EM+ + + P +++YNTL+ GL Q+G L +A  L   M  N  +PD  T++ 
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +DG CK G++ +A ++F+A+++   +  +  YN LI+ +CK   LK A KLF  L  +G
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P+V   +T+I+ LCKEG +D+A +   +ME   C P+E ++  ++RGF+Q+  +S+ V
Sbjct: 538 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 597

Query: 560 VLLHKMAAEKLVVSDLSLSS 579
            L+ +M  EK  V+D++ ++
Sbjct: 598 QLIGEM-REKGFVADVATTA 616



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 198/434 (45%), Gaps = 72/434 (16%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-NGVQPDVVTFN 298
           +D A      M  R   P +I +N L+     +  + +A     + M+  G+ PD  T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +IN   +  ++D    +L  +I+ G+    VT+N+L++G C VG+  +A ELF  MV++
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 359 -----------------------------------GCRHDVYSYNILINANCKDQKVEDA 383
                                              GC+ DV +Y+ +I++ CKD++V +A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + ++  M ++ I P++ TYN+L+ GL       +A  ++++M   +++P+  TF+  I+ 
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIET-------------------------------- 471
            CK G V EA  V + +     E  + T                                
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401

Query: 472 ---YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
              YN LING CK  R+  A +LF+ + H+G  PD+V+ +T+I  LC+ G++ +A+DL  
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +M     +P   T+  LL GF +    +K   L   M +  L   ++ + + ++D + K 
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYL-KPNMVMYNILIDAMCKS 520

Query: 589 KKYRECLNQFRHLL 602
           +  +E    F  L 
Sbjct: 521 RNLKEARKLFSELF 534


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/528 (40%), Positives = 319/528 (60%), Gaps = 4/528 (0%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T ++A+  F+ M+ M P P    FT LLT +AK K Y TV+SL  +++S G+ PD++ LN
Sbjct: 130 TLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN 189

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +LIN  C +     AF VL ++L+    P+  TFN LI GLC EG+I EA  LF K    
Sbjct: 190 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 249

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+VVT+ TL+NGLC+  NT  A++L   MV +    C+P+V+ YN+IID LCKD  V
Sbjct: 250 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN---CRPNVIAYNTIIDSLCKDRQV 306

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  L  +M  + I+P++ TYNSLI   C + +WK    L  EM+++ + P+VV F+ +
Sbjct: 307 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 366

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+G +   + ++++MI+RGV PD VTY +LMDG CL   +  A ++F +MV KGC
Sbjct: 367 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 426

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V SYNILIN  C+ Q+++ A+ L  +M  + +    +TYNTL+ GL  VG L  A+ 
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M  +  +PD  T+   +D LCKN  + EA+ + +AI     +  I  YN  I+G+C
Sbjct: 487 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 546

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G L+ A  LF  L  KG  PDV T + MIH LCK G +D+AN L   M+   C     
Sbjct: 547 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGC 606

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            + T++RGF+++N+      LL +M AE    +D+S ++ +V++LS D
Sbjct: 607 IYNTIIRGFLRSNETFGATQLLQEMLAEGF-SADVSTTTLIVEMLSDD 653



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 3/254 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  FD M+     P + S+ IL+    + ++ D  + L ++++  GL  D    N L
Sbjct: 412 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 471

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC +G    A  +   ++ S   P+ VT+  L++ LC    + EA  L K +     
Sbjct: 472 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 531

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           D +++ +N  I+G+CR      A  LF  + ++     +PDV TYN +I GLCK G +D+
Sbjct: 532 DADILVYNIAIDGMCRAGELEAARDLFSNLSSKG---LQPDVRTYNIMIHGLCKRGLLDE 588

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M +   + +   YN++I GF   ++   A  L  EM+  G   DV T   ++ 
Sbjct: 589 ANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVE 648

Query: 303 YNCKDGKMDKVNRL 316
               DG      RL
Sbjct: 649 MLSDDGLDQSFERL 662


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/526 (38%), Positives = 315/526 (59%), Gaps = 8/526 (1%)

Query: 53  DRHKSGNITS----NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQY-DTVVSLFKRL 107
           D+HK  + +S    ++A+  F+ M+  +P P +  FT LL+ + K  QY   V+SL K++
Sbjct: 62  DKHKHDDASSFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQM 121

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
              GL PD++ L++LI+C   +     AF V  ++++    P+ VTFN LINGLC  G+ 
Sbjct: 122 ELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKF 181

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            +A   F       C P V T+ T+INGLC+   T  A  LF++M     A C+P+VVTY
Sbjct: 182 AQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEE---AGCQPNVVTY 238

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N +ID LCKD  V++A ++   MK + I+P++ TYNSLI G C    WKEA  L  EM  
Sbjct: 239 NILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
             + P++ TFN +++  CK+GK+ +   + + M + GV PD VTY+SLM G+ L   I  
Sbjct: 299 LNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVE 358

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           AR+LF +M++KGC+ D +SYNILI   CK +++++A  L+ EM+ + + P  + YNTL+ 
Sbjct: 359 ARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIH 418

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GL Q+G L +A  L   M  N  +PD FT++  +DG CK G++ +A ++F+ +++   + 
Sbjct: 419 GLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKP 478

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            I  YN LI+ +CK G LK A KLF  L  +G +P+V   +T+I+ LCKEG +D+A +  
Sbjct: 479 DIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAF 538

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
            +ME   C P E ++  ++RGF+Q   +S+   L+ +M     V  
Sbjct: 539 RNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAE 584



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 207/419 (49%), Gaps = 3/419 (0%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P ++ F  L++ + +      A+    + +   G    PD+ T + +ID       VD A
Sbjct: 92  PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAG--LSPDIYTLSILIDCFSHLQRVDLA 149

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  +M    + P+ +T+N+LI G C V  + +A   F +   +G QP V T+  +IN 
Sbjct: 150 FSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIING 209

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+      L + M + G  P+ VTYN L+D  C    ++ A ++F  M +K    D
Sbjct: 210 LCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPD 269

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           +++YN LI   C  ++ ++A  L  EM S  I P++ T+N L+  + + G + +A  +  
Sbjct: 270 IFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFK 329

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M    V PD  T+++ + G      ++EA ++F A+    C+    +YN LI G CK  
Sbjct: 330 TMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAK 389

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+  A +LF+ + H+G  PD V  +T+IH LC+ G++ +A DL  +M +   +P   T+ 
Sbjct: 390 RIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYS 449

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            LL GF +     K   L   M +  L   D+++ + ++D + K    ++    F  L 
Sbjct: 450 MLLDGFCKEGYLGKAFRLFRVMQSTYL-KPDIAMYNILIDAMCKFGNLKDARKLFSELF 507


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/541 (38%), Positives = 324/541 (59%), Gaps = 7/541 (1%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T +EA+  F+ M+ M+P P +  F  +LT +A  K Y TV+SL K+++S G+  D++ L 
Sbjct: 54  TIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLA 113

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           ++IN  C +      F VL +I +    P+T TF  LI GLC EG+I EA  LF K+   
Sbjct: 114 IVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE 173

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              PN VT+ TLI+GLC+  N+  A++L   MV +    C+P+V+TYN+IID L KD  V
Sbjct: 174 GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKN---CEPNVITYNTIIDCLFKDRQV 230

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           ++A  +  +M  + I+PNV TYNS+I G C   +WK    L  EM+D+ + P+VV F  +
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+G +   + ++++MIQRGV PD VTY +LMDG CL   +  A ++F +MV KGC
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V SY+ LIN  CK Q+++ A+ L+ EM    + P+++TYNTL+ GL  VG L DA+ 
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M  +  +PD  T+   +D LCK   + +A+ + +AI        I++YN +I+G+C
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           ++G L+ A  LF  L  KG  PDV T + MI+ LC +G + +A  L  +M    C P + 
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDC 530

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYRECLNQ 597
           T+  + RGF++NN+    + LL +M       +D S  + +V++LS    D+  ++ L++
Sbjct: 531 TYNLITRGFLRNNETLSAIQLLQEMLGRGF-SADASTITLIVEMLSDDGLDQSVKQILHE 589

Query: 598 F 598
           F
Sbjct: 590 F 590



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 3/260 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M++   +P + S++ L+    K ++ D  + LF+ +    L P++   N L
Sbjct: 336 DEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTL 395

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC +G    A  +   ++ S   P+ VT+  L++ LC    + +A  + K +     
Sbjct: 396 IHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNL 455

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++ ++N +I+G+CR      A  LF  + ++      PDV TY  +I+GLC  G + +
Sbjct: 456 APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG---LHPDVWTYTIMINGLCLQGLLAE 512

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M     +P+  TYN +  GF   ++   A  L  EM+  G   D  T   ++ 
Sbjct: 513 ATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572

Query: 303 YNCKDGKMDKVNRLLELMIQ 322
               DG    V ++L   +Q
Sbjct: 573 MLSDDGLDQSVKQILHEFVQ 592



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 36/223 (16%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +++A+  +  ML  +  PSV+ +  +L+ +  + +    L L  +M    +  D +T A 
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+  C    V     V   I     +    T+  LI GLC  G++  A  LF ++  +G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P+ VT  T+IH LCK G    A  LL  M  KNC P+ +T+ T               
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNT--------------- 219

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                                ++D L KD++  E LN F  ++
Sbjct: 220 ---------------------IIDCLFKDRQVNEALNIFSEMI 241


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/542 (38%), Positives = 330/542 (60%), Gaps = 8/542 (1%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           S NI+ ++A+  F  M++M P P +  F   L   AK KQY TVVSL  +++  G+  ++
Sbjct: 64  STNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNV 123

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           + LN+LINCLC++     A  +LG++ +    P   TFN LINGLC EG+I EA  LF +
Sbjct: 124 YSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNE 183

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +     +PNV+++NT+INGLC+T NT +A+ +F++M       CKPDVVTYN+IID LCK
Sbjct: 184 MVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG---CKPDVVTYNTIIDSLCK 240

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           D  V+ A E L +M DR I PNV TYN ++ GFC +    EA  LF EM+   V PD VT
Sbjct: 241 DRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVT 300

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
              +++  CK+G + +   + E M ++GV P+  TYN+LMDG+CL   ++ A+++F  M+
Sbjct: 301 LTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMI 360

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +GC   V+SYNILIN  CK +++++A  L  EM  + + P  +TY+TL+ GL Q G   
Sbjct: 361 RQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPK 420

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +AL +  +M    ++P+  T++  +DG CK+G + EA+++ ++++  K E  I  +  LI
Sbjct: 421 EALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILI 480

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            G+   G+L+ A +LF +L   G  P + T + MI  L KEG  D+A DL   ME    +
Sbjct: 481 EGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFL 540

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           P+  ++  +++GF+QN   S  + L+ +M  ++   ++LS    ++DL S+D    E ++
Sbjct: 541 PNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRF-SANLSTFQMLLDLESQD----EIIS 595

Query: 597 QF 598
           QF
Sbjct: 596 QF 597



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 87/177 (49%)

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
            ++ N  +  ++DA+  +  M+    RPSV  +   L    +       + L ++M L  
Sbjct: 59  FVSNNSTNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFG 118

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           V  + ++    I+ LC+   V  AV +   +          T+N LINGLC  G++K A 
Sbjct: 119 VTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAV 178

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           +LF+ +  +G  P+V++ +T+I+ LCK G    A D+   ME   C P  VT+ T++
Sbjct: 179 ELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTII 235


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/534 (39%), Positives = 322/534 (60%), Gaps = 5/534 (0%)

Query: 56  KSGNI-TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           KS N+ T ++A+  F+ M++M+P P +  F+ LLT + + K Y TV+SL+K+++S G+  
Sbjct: 28  KSLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPH 87

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           + + LN+LIN  C +     AF VLG IL+  + P+T TF  LI GLC EG+I EA +LF
Sbjct: 88  NTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLF 147

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            K+      P+V+T+ TLINGLC+  NT  A++    M       C+P VV Y++IID L
Sbjct: 148 DKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN---CRPTVVVYSTIIDSL 204

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CKD  + +A  L   M  + I+PN  TY+SLI G C +  WKEA  LF  M+   + PD 
Sbjct: 205 CKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQ 264

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +TFN +++  CK+G + K + ++++MIQ  + PD VTYNSLMDG CL   + +   +F +
Sbjct: 265 LTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDT 324

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           MV KGC   V SY  LIN  CK Q ++ A+ L+ EM  + + P  +TYNTL+ GL  VG 
Sbjct: 325 MVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGR 384

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L DA+ L  +M +   +PD  T+    D LCKN  + EA+ + + I     +  I  Y+ 
Sbjct: 385 LRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSI 444

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +++G+C+ G L+ A  LF +L  KG  PDV T + MI+ LC++G + +A+ L  +M+   
Sbjct: 445 VMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENG 504

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           C P+  T+  + RGF++NN+  + + L  +M +    + D+S ++ +V++LS D
Sbjct: 505 CSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSI-DVSTTTLLVEMLSDD 557



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 125/255 (49%), Gaps = 3/255 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            + V  FD M++    P + S+T L+    K +  D  + LF+ ++  GL PD    N L
Sbjct: 316 GKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTL 375

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC +G    A  +   ++     P+ VT+  L + LC   R+ EA  L K +     
Sbjct: 376 IHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNL 435

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           DP++  ++ +++G+CR      A  LF ++ ++      PDV TY  +I+GLC+ G + +
Sbjct: 436 DPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG---LHPDVRTYTIMINGLCQQGLLAE 492

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M +   +PN  TYN +  GF   ++   A  LF EM+  G   DV T   ++ 
Sbjct: 493 ASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552

Query: 303 YNCKDGKMDKVNRLL 317
               DG    V ++L
Sbjct: 553 MLSDDGLDQSVKQIL 567



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 36/223 (16%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           ++DA+ L+  ML  R  PS++ ++ LL+ + ++ +    L L  +M    +  +++T   
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+  C    +  A  V   I     +    T+  LI GLC  G++  A +LF ++  +G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             PDV+T  T+I+ LCK G    A   L  ME +NC P+ V + T               
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYST--------------- 199

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                                ++D L KD++  E L+ F  +L
Sbjct: 200 ---------------------IIDSLCKDRQLTEALSLFSDML 221


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/567 (38%), Positives = 338/567 (59%), Gaps = 15/567 (2%)

Query: 39  HHFKDGTSIAKFLNDRHKSGNITSN-------EAVYFFDCMIKMKPSPGMTSFTILLTML 91
           HHF   TS  K    ++  G +++N       +A+  F  M+++ P P +  F   L   
Sbjct: 44  HHFLTSTSTKKPSLPKNNDGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSF 103

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
           AK KQY TVVSL  +++   +  +++ LN+LINCLC++     +  VLG++ +    P+ 
Sbjct: 104 AKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDA 163

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           +TFN LINGLC EG+I EA  LF ++     +PNV+++ T+INGLC+T NT +A+ +F++
Sbjct: 164 ITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKK 223

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M       CKP+VVTY++IID LCKD  V+ A E L +M +R I PNV TYNS++ GFC 
Sbjct: 224 MEQNG---CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCN 280

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
           +    EA  LF EM+   V P+ VTF  +++  CK+G + +   + E M ++GV PD  T
Sbjct: 281 LGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIST 340

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YN+LMDG+CL   ++ A+++F  M+ KGC    +SYNILIN  CK +++++A  L  EM 
Sbjct: 341 YNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMY 400

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
            + + P  +TY+TL+ GL Q+G   +AL L  +M      P+  T+   +DG CK+G + 
Sbjct: 401 HKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLD 460

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           EA+++ ++++  K E  I  Y  LI G+   G+L+ A +LF +L   G  PD+ T + MI
Sbjct: 461 EALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMI 520

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             L KEG  D+A DL   ME    +P+  ++  +++GF+QN   S  + L+ +M  ++  
Sbjct: 521 KGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFS 580

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQF 598
           V +LS    ++DL S+D    E ++QF
Sbjct: 581 V-NLSTFQMLLDLESQD----EIISQF 602


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/518 (39%), Positives = 324/518 (62%), Gaps = 5/518 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQY-DTVVSLFKRLNSNGLFPDLFVLNL 121
           ++A+  F+ M+  KP P +  FT LL+ + K  QY DTV+SL K++   GL P+++ L++
Sbjct: 79  DDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSI 138

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LINC   +     AF VL +I++    P  VTF  LIN LC  G+  +A  LF  +    
Sbjct: 139 LINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARG 198

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P+V T+ T+INGLC+   T  A  L ++M  E G  C+P+VVTY++IID   KD  V+
Sbjct: 199 CRPDVYTYTTIINGLCKIGETAAAAGLLKKM-EEAG--CQPNVVTYSTIIDSHRKDRRVN 255

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A ++   MK + I+P++ TYNSLI G C    WKEA  L  EM    + PD+VTFN ++
Sbjct: 256 EALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLV 315

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK+GK+ +   +L+ M + GV PD VTY+SLM G+ L   +  AR+LF +M++KGC+
Sbjct: 316 DTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCK 375

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            DV+SYNILIN  CK +++++A  L+ EM+ + + P+ ++YNTL+ GL Q+G+L +A  L
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNL 435

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
              M  N  +P+ FT++  +DG CK G+  +A ++F+A+++   +  +  YN LI+ +CK
Sbjct: 436 FKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCK 495

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G L+ A KLF  L  KG  P+    +T+I+ LCKEG +D+A +   +ME   C P E++
Sbjct: 496 SGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEIS 555

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +  ++RGF+ +  +S+ V L+ +M  +K  ++D+  ++
Sbjct: 556 YNVIIRGFLHHKDESRAVQLIGEM-RDKGFIADVGTTA 592



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 197/442 (44%), Gaps = 72/442 (16%)

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-NGV 290
           D  C    +D A      M  R   P +I +  L+     +  + +      + M+  G+
Sbjct: 70  DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P++ T + +IN      ++D    +L  +I+ G+ P  VT+ +L++  C VG+ ++A E
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189

Query: 351 LFVSMVSKGCRHDVYSYNILINANC----------------------------------- 375
           LF  MV++GCR DVY+Y  +IN  C                                   
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           KD++V +A+ ++  M  + I P + TYN+L+ GL       +A  L+++M+  +++PD  
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309

Query: 436 TFATYIDGLCKNG-----------------------------------FVLEAVQVFQAI 460
           TF   +D +CK G                                    V+EA ++F A+
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
               C+  + +YN LING CK+ R+  A +LF+ + H+G  P+ V+ +T+IH LC+ G +
Sbjct: 370 ITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
            +A +L  +M     +P+  T+  LL GF +     K   L   M +      +L + + 
Sbjct: 430 REARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQS-TYSKPNLVMYNI 488

Query: 581 VVDLLSKDKKYRECLNQFRHLL 602
           ++D + K    R+    F  L 
Sbjct: 489 LIDAMCKSGNLRDARKLFSELF 510


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/541 (39%), Positives = 324/541 (59%), Gaps = 8/541 (1%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T ++A+  F+ M+ M P P    F  LLT +AK KQY TV SL  +++S G+ PD++ LN
Sbjct: 49  TLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLN 108

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +LIN  C +     AF VL +IL+    P+T TF  LI GLC EG+I +A  LF K+   
Sbjct: 109 ILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 168

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              PNVVT+ TLINGLC+  NT  A++L   M  E G  C+PDVV Y SIID LCKD  V
Sbjct: 169 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM--EQGN-CQPDVVVYTSIIDSLCKDRQV 225

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  L  +M  + I+P++ TY SLI   C + +WK    L  +M+++ + PDVV F+ +
Sbjct: 226 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 285

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+GK+ + + ++++MI RGV P+ VTYN+LMDG CL   +  A ++F +MV  G 
Sbjct: 286 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 345

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V SYN LIN  CK Q+++ A  L+ EM  + + P+ +TYNTL+     VG L DA+ 
Sbjct: 346 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIA 404

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M  +  +PD  T+   +D LCK   + EA+ + + I     +  I+ Y  +I+G+C
Sbjct: 405 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMC 464

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G L+ A  +F  L  KG  P+V T + MI+ LC+ G +D+AN L ++M+   C P   
Sbjct: 465 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC 524

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK---KYRECLNQ 597
           T+ T+ +G +QN +  + + LL +M A     +D+S ++ +V++L  DK     ++ L++
Sbjct: 525 TYNTITQGLLQNKEALRAIQLLQEMLARGF-SADVSTTTLLVEMLCDDKLDQSVKQILSE 583

Query: 598 F 598
           F
Sbjct: 584 F 584



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 4/260 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  FD M+    +P + S+  L+    K ++ D    LF+ +    L P+    N L
Sbjct: 331 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 390

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C +G    A  +   ++     P+  T+  L++ LC +  + EA  L K +     
Sbjct: 391 MH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 449

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           DP++  +  +I+G+CR      A  +F  + ++     +P+V TY  +I+GLC+ G +D+
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG---LRPNVRTYTIMINGLCRRGLLDE 506

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L ++M     +P+  TYN++  G     +   A  L  EM+  G   DV T   ++ 
Sbjct: 507 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 566

Query: 303 YNCKDGKMDKVNRLLELMIQ 322
             C D     V ++L   +Q
Sbjct: 567 MLCDDKLDQSVKQILSEFVQ 586


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 238/575 (41%), Positives = 334/575 (58%), Gaps = 56/575 (9%)

Query: 31  NPKTDLSSHH---FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTIL 87
           NPK+  +S     F+ G  I  FL+ + K+G+I+  +A  FFD M++      + SF  L
Sbjct: 46  NPKSLHASPERISFQHG--IPMFLH-KCKTGSISVTQAHQFFDLMMR-----SIFSFNRL 97

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L  LAK + Y  V SL+K+++  GL+PDL                               
Sbjct: 98  LAGLAKIEHYSQVFSLYKQMHLAGLWPDL------------------------------- 126

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
               +T N LIN LC   RI E       +      P+VVTF TLI GLC     + A K
Sbjct: 127 ----LTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATK 182

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR------NINPNVIT 261
           LF  M  + G  C P+VVTY ++I GLC  G ++ A +   +M +       N  PNVI+
Sbjct: 183 LFMRM-QKLG--CTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVIS 239

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y+ +I G C V +W+EA CLF EM+D GVQP+VVTF+ +I+  CK+G++ K  +LLE+MI
Sbjct: 240 YSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMI 299

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           Q G+ P+  TY SL+ GFCLVG ++ A+ELFVSM SKG   DV SYN+LIN  CK  KVE
Sbjct: 300 QIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVE 359

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           +A+ L+ EML   + P V T   LL  LF  G + DA +L   ++   +  D      ++
Sbjct: 360 EAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFL 419

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCKNG++ EA+++F  + +   +L IET+ CLI+GLCK G+L+TA +LF +L  +G  
Sbjct: 420 DGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQ 479

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           PD +  S+MIH  CK+GQ+DKAN L   ME   C P  +T+  L+RGF ++NK  KVV L
Sbjct: 480 PDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQL 539

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           LH+M  EK V  D  + + V D++ KD+KY+E L+
Sbjct: 540 LHRM-IEKDVWPDDGIYAIVEDMVCKDEKYKEWLD 573



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 180/362 (49%), Gaps = 38/362 (10%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           Y F+C       P + S++I++  L K   ++  + LF  +   G+ P++   ++LI+ L
Sbjct: 229 YVFNC------RPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDML 282

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           CK G    A  +L  +++    PN  T+  LI G C  G +  A  LF  +     +P+V
Sbjct: 283 CKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDV 342

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVN---------------------------EFGAI 219
           +++N LING C+T     A+KLF EM++                           E   +
Sbjct: 343 ISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRV 402

Query: 220 CKPDVVTYNSII-----DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
            KP  +  +  I     DGLCK+G++ +A +L  +++  N+  ++ T+  LI G C    
Sbjct: 403 IKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGK 462

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
            + A  LF ++ + G+QPD + +++MI+  CK G++DK N L + M + G +PD +TY+ 
Sbjct: 463 LETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSI 522

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           LM GF    ++ +  +L   M+ K    D   Y I+ +  CKD+K ++ + L +    ++
Sbjct: 523 LMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQK 582

Query: 395 IR 396
            R
Sbjct: 583 HR 584


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 217/594 (36%), Positives = 346/594 (58%), Gaps = 12/594 (2%)

Query: 2   VFKSSHRSFSLASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNIT 61
            FK+S  S     +      F+     P  P     +HH    ++  K  +    +G   
Sbjct: 9   AFKASASSSIWVVQQHMEMGFYLFL--PDFPSFLFFNHHHITTSTCTKKRSLPQNNGGFL 66

Query: 62  SNEAVYFFDC------MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           SN ++   D       M++M P P +  F   L  +AK KQY TVVSL  +++  G+  +
Sbjct: 67  SNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHN 126

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++ LN+LINCLC++     A  VLG++ +    P+ +TFN LING C EG I EA  LF 
Sbjct: 127 VYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFN 186

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P+V++++T+INGLC++ NT +AL+L  +M  E G  CKP++V Y +IID LC
Sbjct: 187 EMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM-EEKG--CKPNLVAYTTIIDSLC 243

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           KD  V+ A +LL +M DR I P+V+TY++++ GFC +    EA  LF EM+   V P+ V
Sbjct: 244 KDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTV 303

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           TF  +++  CK+G + +   + E M ++G  P+  TYN+LMDG+CL  ++  A+++   M
Sbjct: 304 TFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM 363

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V KGC   V+SYNILIN  CK +++++A  L  EM  + + P  +TY+TL+ GL QVG  
Sbjct: 364 VDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRP 423

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +AL L  +M  + ++PD  T++T +DGLCK+G + EA+++ ++++  K E  I  YN L
Sbjct: 424 QEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNIL 483

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I G+   G+L+ A +LF +L   G  P + T + MI  L KEG  D+A +L   ME    
Sbjct: 484 IEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGF 543

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           +P+  ++  +++GF+QN   S  + L+ +M  ++   +D S    ++DL S+D+
Sbjct: 544 LPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRF-SADSSTFQMLLDLESRDE 596


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/533 (37%), Positives = 325/533 (60%), Gaps = 4/533 (0%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           S +I+ ++A+  F  M++M P P +  F   L  +AK KQY + VSL  +++  G+  ++
Sbjct: 72  SNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNV 131

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           + LN+LINCLC++     A  V+G++ +    P+ +TFN LINGLC EG+I EA  LF +
Sbjct: 132 YSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNE 191

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +     +PNV+++NT+INGLC+  NT++A+++F +M    G   KP+VVTYN+IID LCK
Sbjct: 192 MVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG---KPNVVTYNTIIDSLCK 248

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           D  V++A E L +M DR I P+V+TYN+++ GFC +    EA  LF EM+   V PD VT
Sbjct: 249 DRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVT 308

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           FN +++  CK+G + +   + E M ++G  P+  TYN+LMDG+CL  ++  A ++   M+
Sbjct: 309 FNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMI 368

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KGC  ++ SYNILIN  CK +++ +A  L  EM  + + P  +TY+TL+ GL QVG   
Sbjct: 369 GKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPR 428

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +AL L  +M  + ++PD   ++  +DG CK+G + EA+++ + +   + +  I  Y  LI
Sbjct: 429 EALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILI 488

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            G+   G+L+ A +LF +L   G  PD+ T + MI  L KEG  D+A +    ME    +
Sbjct: 489 RGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFL 548

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           P   ++  +++GF+QN   S  + L+ +M  ++   +D S    ++DL S D+
Sbjct: 549 PDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRF-SADSSTFQMLLDLESHDE 600


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/517 (37%), Positives = 321/517 (62%), Gaps = 8/517 (1%)

Query: 54  RHKSGNITS----NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQY-DTVVSLFKRLN 108
           +HK+   +S    ++A+  F+ M+  KP P +  F  LL+ + K  QY D V+SL K++ 
Sbjct: 61  QHKNDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQME 120

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
             GL P+++ L++ +NC C++      F VL ++++    P  VTF  LINGLC  G   
Sbjct: 121 LVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFA 180

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A  LF  +    C P+V T+NT+INGLC+   T  A  L ++M  E G  C+P++VTY+
Sbjct: 181 QAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM-EEAG--CQPNMVTYS 237

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++ID LC+D  V++A ++   MK + I+P++ TY SLI G C    WKEA  L  EM   
Sbjct: 238 TLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL 297

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
            + PD+VTFN +++  CK+GK+ +   +L+ M + GV P+ VTY+SLM G+ L   +  A
Sbjct: 298 NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEA 357

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           R+LF  M++KGC+ +++SYNILIN  CK +++++A+ L+ EM+ + + P+ ++YNTL+ G
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG 417

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             Q+G L +A  L   M  N  +PD FT++  +DG CK G++ +A ++F+A+++   +  
Sbjct: 418 FCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 477

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           +  Y  L++ +CK G  K A KLF  L  +G  P V   +T+I+ LCKEG +D+A +   
Sbjct: 478 LVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFR 537

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +MEA  C P E+++  ++RG +Q+  +S+ ++L+ +M
Sbjct: 538 NMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEM 574



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 233/454 (51%), Gaps = 5/454 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAA-RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           P  + F  L++ +   G+  +    L K++ +    PN+ T +  +N  C+ +   +   
Sbjct: 90  PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFS 149

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +  +++ + G   +P +VT+ ++I+GLCK G   +A EL   M  +   P+V TYN++I 
Sbjct: 150 VLAKVI-KLG--LQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIIN 206

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C + +   A  L  +M + G QP++VT++ +I+  C+D  +++   +   M  +G++P
Sbjct: 207 GLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISP 266

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  TY SL+ G C   R   A  L   M S     D+ ++N+L++  CK+ KV +A+ + 
Sbjct: 267 DIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVL 326

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           + M    + P+V+TY++L+ G     ++ +A KL   M      P+ F++   I+G CK 
Sbjct: 327 KTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKA 386

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             + EA+Q+F  + +        +YN LI+G C++G+L+ A  LF  +   G +PD+ T 
Sbjct: 387 KRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTY 446

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           S ++   CK+G + KA  L   M++    P+ V +  L+    ++        L  ++  
Sbjct: 447 SILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFV 506

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + L    + L + +++ L K+    E L  FR++
Sbjct: 507 QGL-QPHVQLYTTIINGLCKEGLLDEALEAFRNM 539



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 3/205 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F+ MI    +P   S+  L+    +  +      LF+ + +NG  PDLF  ++L
Sbjct: 390 DEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSIL 449

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK G    AF +   +  +   PN V +  L++ +C  G   +A +LF +L V   
Sbjct: 450 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGL 509

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V  + T+INGLC+      AL+ F  M  +    C PD ++YN II GL +     +
Sbjct: 510 QPHVQLYTTIINGLCKEGLLDEALEAFRNMEADG---CPPDEISYNVIIRGLLQHKDESR 566

Query: 243 AKELLLQMKDRNINPNVITYNSLIC 267
           A  L+ +M+DR    +V    S +C
Sbjct: 567 ALLLVGEMRDRGFIADVRPCLSEVC 591


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/527 (37%), Positives = 312/527 (59%), Gaps = 4/527 (0%)

Query: 49  KFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQY-DTVVSLFKRL 107
           K  ND   S     ++A+  F+ M+  KP P +  F  LL+ + + +QY D V+SL K++
Sbjct: 58  KHKNDDASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQM 117

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
              GL P+   LN+LINC C M      F VL ++++    P  +TF  LINGLC  G  
Sbjct: 118 ELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEF 177

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            +A  LF  +    C P+V T+ T+INGLC+   T  A  L ++M  E G  C+PDVVTY
Sbjct: 178 AQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKM-GEVG--CQPDVVTY 234

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           +++ID LCKD  V++A ++   MK + I+P V++Y SLI G C    WKEA  +  EM  
Sbjct: 235 STLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTS 294

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
             + PD+VTF+ +I+  CK+G + +   +L+ M + GV P+ +TYNSLM G+ L   +  
Sbjct: 295 LNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVE 354

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           AR+LF  M+++GC+ DV+SY+ILIN  C  +++++A  L+ EM+ + + P+ ++Y TL+ 
Sbjct: 355 ARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIH 414

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
              Q+G L +A +L   M  N  +PD  T++  ++G CK G++ +A ++F+A++    + 
Sbjct: 415 AFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKP 474

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            +  Y  LI+ +CK G L  A KLF  L   G  PDV   +T+I+ LCKEG +D+A +  
Sbjct: 475 NLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAF 534

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
             ME   C P+E ++  ++RGF+Q+  +S+ V L+ +M  +  V  +
Sbjct: 535 RKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADE 581



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 191/361 (52%), Gaps = 3/361 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + +++ L+  L K++  +  + +F  + + G+ P +     LI  LC       A  
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +      P+ VTF+ LI+  C EG ++EA  + K +     +PNV+T+N+L++G  
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                + A KLF+ M+      CKPDV +Y+ +I+G C    +D+AK+L  +M  + + P
Sbjct: 348 LQMEVVEARKLFDVMITRG---CKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTP 404

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N ++Y +LI  FC +   +EA+ LF +M  NG  PD+ T++ ++   CK G + K  RL 
Sbjct: 405 NTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLF 464

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M    + P+ V Y  L+D  C  G ++ AR+LF  +   G + DV  Y  +IN  CK+
Sbjct: 465 RAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKE 524

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             +++A+  +R+M  +   P+  +YN ++ G  Q  +   A++LI +M+    V D  T 
Sbjct: 525 GLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGTT 584

Query: 438 A 438
           A
Sbjct: 585 A 585


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/562 (36%), Positives = 332/562 (59%), Gaps = 11/562 (1%)

Query: 30  PNPKTDLSSHHFKDGTSIAKFLNDRHKSGNI---TSNEAVYFFDCMIKMKPSPGMTSFTI 86
           P P T + S      +     L++R +S  +   T ++A+  F+ M+ M P P +  F  
Sbjct: 24  PGPGTGMLS----IPSPFLSLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAK 79

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           +LT + K K+Y TV+SL ++++S G+  +++ LN+LIN  C +   + AF VL +IL+  
Sbjct: 80  ILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLG 139

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+T +F  LI GLC EG+I EA  LF K+      P+VV + TLINGLC+T +T  A+
Sbjct: 140 CQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAI 199

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +L   M  E G  C+PDVV Y ++I  LCKD    +A  L  +M  + I+PN++T NSL+
Sbjct: 200 RLLRSM--EKGN-CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLV 256

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
              C + +WK    L  EM+D+ + P+ ++   +++  CK+G + + + ++++M Q GV 
Sbjct: 257 YALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVE 316

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD VTY +L+DG CL   +  A ++F  MV KGC  +V+SYN LIN  CK ++++ A+ L
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYL 376

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + EM  +++ P+ +TYNTL+ GL  VG L DA+ L  +M     +PD  T+   +D LCK
Sbjct: 377 FEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCK 436

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           N  + +A+ + +AI     +  I+ Y  +I+G+C+ G L+ A  LF  L  KG  P+V T
Sbjct: 437 NCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWT 496

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            + M H LCK G +D+A  L ++M+   C     T+ T+ +GF++NN+ S+ + LL +M 
Sbjct: 497 YNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEML 556

Query: 567 AEKLVVSDLSLSSKVVDLLSKD 588
           A      D+S ++ +V +LS D
Sbjct: 557 ARGFSC-DVSTTTLLVGMLSDD 577


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/500 (39%), Positives = 301/500 (60%), Gaps = 3/500 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+ ++  P +  F  +L  L K K Y TV+SL K++ + G+ PDL  L++LINC C +G 
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + +F VLG+IL+  + PNT+  N L+ GLC +G + ++     K+       + V++  
Sbjct: 61  MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+NGLC+   T  A+KL   + +      +PDVV Y++IIDGLCKD  VD+A +L  +M 
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRS---TRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMN 177

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R I P+VITY +LICGFC      EA  L  EM+   + P++ T+N +I+  CK+GK+ 
Sbjct: 178 ARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVK 237

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL +M ++GV PD V Y+ LMDG+CLVG + +A+++F+ MV  G   DVYSYNI+I
Sbjct: 238 ESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIII 297

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N  CK ++V++A+ L REML + + P  +TY++L+ GL ++G +   L L  +M      
Sbjct: 298 NGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQP 357

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            +  T+ + +DGLCKN  + +A+ +F  ++    +    TY  LI+GLCK GRLK    L
Sbjct: 358 ANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQAL 417

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F  L  KG   DV T + MI  LCKEG  D+A  +   ME   C+P+ VTF  ++R  ++
Sbjct: 418 FQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLE 477

Query: 552 NNKKSKVVVLLHKMAAEKLV 571
            ++  K   LLH+M A+ L+
Sbjct: 478 KDENDKAEKLLHEMIAKGLL 497



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 227/431 (52%), Gaps = 3/431 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           ++K+   P       L+  L    +    +    ++ + G   D     +L+N LCK+G 
Sbjct: 71  ILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGE 130

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T  A  +L  I      P+ V ++ +I+GLC +  + EA  L+ ++N     P+V+T+ T
Sbjct: 131 TRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTT 190

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI G C     + A  L  EM+ +      P++ TYN++ID LCK+G V ++K LL  M 
Sbjct: 191 LICGFCLAGQLMEAFGLLNEMILKN---INPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + + P+V+ Y+ L+ G+C V + ++AK +F+ M+  GV PDV ++N +IN  CK  ++D
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL  M+ + + PDTVTY+SL+DG C +GRI+   +L   M  +G   ++ +YN L+
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CK+Q ++ A+ L+ +M    I+P+  TY  L+ GL + G L     L   + +    
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYC 427

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            D +T+   I GLCK G   EA+ +   + +  C     T+  +I  L +      A KL
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKL 487

Query: 492 FHRLQHKGPIP 502
            H +  KG +P
Sbjct: 488 LHEMIAKGLLP 498



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 199/381 (52%), Gaps = 3/381 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           ++++F D ++         S+ ILL  L K  +    + L + +      PD+ + + +I
Sbjct: 98  KSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTII 157

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK  +   A+ +   +      P+ +T+  LI G C  G++MEA  L  ++ +   +
Sbjct: 158 DGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNIN 217

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+ T+NTLI+ LC+      +  L   M  +     KPDVV Y+ ++DG C  G V KA
Sbjct: 218 PNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKG---VKPDVVIYSILMDGYCLVGEVQKA 274

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K++ L M    +NP+V +YN +I G C      EA  L  EM+   + PD VT++++I+ 
Sbjct: 275 KQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDG 334

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G++  +  L + M  RG   + VTYNSL+DG C    + +A  LF+ M  +G + +
Sbjct: 335 LCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPN 394

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            Y+Y  LI+  CK  +++    L++ +L +     V TY  ++SGL + G   +AL +  
Sbjct: 395 KYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKS 454

Query: 424 KMQLNDVVPDSFTFATYIDGL 444
           KM+ N  +P++ TF   I  L
Sbjct: 455 KMEDNGCIPNAVTFEIIIRSL 475



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 3/195 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+     M+     P   +++ L+  L K  +  T++ L K ++  G   +L   N L
Sbjct: 307 DEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSL 366

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LCK      A  +  ++      PN  T+  LI+GLC  GR+ +   LF+ L V   
Sbjct: 367 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGY 426

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +V T+  +I+GLC+      AL +  +M +     C P+ VT+  II  L +    DK
Sbjct: 427 CIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNG---CIPNAVTFEIIIRSLLEKDENDK 483

Query: 243 AKELLLQMKDRNINP 257
           A++LL +M  + + P
Sbjct: 484 AEKLLHEMIAKGLLP 498


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/500 (39%), Positives = 305/500 (61%), Gaps = 3/500 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+ ++ +P +  F  ++  L K K Y T +SLFK++   G+ PDLF LN+LINC C +G 
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + +F VLG+IL+  + PNT+T N L+ GLC +G + ++     K+       + V++ T
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+NGLC+   T  ALKL   M+ +     +P+VV YN+IIDGLCKD  V++A +L  +M 
Sbjct: 121 LLNGLCKIGETRSALKLLR-MIEDRST--RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMD 177

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R I PNVITY++LI GFC      EA  L  EM+   + P+V T+  +++  CK+GK+ 
Sbjct: 178 ARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVK 237

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL +M + GV P+ V+YN+LMDG+CL+G +  A+++F +MV KG   +VYSYNI+I
Sbjct: 238 EAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMI 297

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CK ++V++A+ L RE+L + + P+ +TY++L+ G  ++G +  AL L+ +M      
Sbjct: 298 DRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQP 357

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            D  T+ + +D LCKN  + +A  +F  ++    +    TY  LI+GLCK GR K A KL
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKL 417

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F  L  KG   +V T + MI  LCKEG +D+A  +   ME   C+P  VTF  ++R   +
Sbjct: 418 FQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFE 477

Query: 552 NNKKSKVVVLLHKMAAEKLV 571
            ++  K   LLH+M A+ L+
Sbjct: 478 KDQNDKAEKLLHEMIAKDLL 497



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 202/381 (53%), Gaps = 3/381 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           ++++F D ++         S+  LL  L K  +  + + L + +      P++ + N +I
Sbjct: 98  KSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTII 157

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK  + + A+ +   +      PN +T++ LI G C  G++MEA  L  ++ +   +
Sbjct: 158 DGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNIN 217

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNV T+  L++ LC+      A  L   M  E     KP+VV+YN+++DG C  G V  A
Sbjct: 218 PNVYTYTILMDALCKEGKVKEAKNLLAVMTKEG---VKPNVVSYNTLMDGYCLIGEVQNA 274

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K++   M  + +NPNV +YN +I   C      EA  L  E++   + P+ VT++++I+ 
Sbjct: 275 KQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDG 334

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G++     LL+ M  RG   D VTY SL+D  C    + +A  LF+ M  +G + +
Sbjct: 335 FCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPN 394

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            Y+Y  LI+  CK  + ++A  L++ +L +  R +V TYN ++SGL + G L +AL +  
Sbjct: 395 KYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKS 454

Query: 424 KMQLNDVVPDSFTFATYIDGL 444
           KM+ N  +PD+ TF   I  L
Sbjct: 455 KMEENGCIPDAVTFEIIIRSL 475



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 168/331 (50%), Gaps = 3/331 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   +  M      P + +++ L+       Q      L   +    + P+++   +L
Sbjct: 167 NEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTIL 226

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LCK G    A  +L  + +    PN V++N L++G C  G +  A ++F  +     
Sbjct: 227 MDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGV 286

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +PNV ++N +I+ LC+++    A+ L  E++++      P+ VTY+S+IDG CK G +  
Sbjct: 287 NPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMV---PNTVTYSSLIDGFCKLGRITS 343

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +M  R    +V+TY SL+   C   +  +A  LF++M + G+QP+  T+ A+I+
Sbjct: 344 ALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALID 403

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+     +L + ++ +G   +  TYN ++ G C  G +  A  +   M   GC  
Sbjct: 404 GLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIP 463

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           D  ++ I+I +  +  + + A  L  EM+++
Sbjct: 464 DAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 144/304 (47%), Gaps = 10/304 (3%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +   EA      M K    P + S+  L+       +      +F  +   G+ P+
Sbjct: 232 KEGKV--KEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPN 289

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N++I+ LCK      A  +L  +L     PNTVT++ LI+G C  GRI  A  L K
Sbjct: 290 VYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLK 349

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++       +VVT+ +L++ LC+ +N   A  LF +M  E G   +P+  TY ++IDGLC
Sbjct: 350 EMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM-KERG--IQPNKYTYTALIDGLC 406

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G    A++L   +  +    NV TYN +I G C      EA  +  +M +NG  PD V
Sbjct: 407 KGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAV 466

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           TF  +I    +  + DK  +LL  MI +    D + +     G        +A +L   M
Sbjct: 467 TFEIIIRSLFEKDQNDKAEKLLHEMIAK----DLLRFRDF-HGERSPNENDKAEKLLHEM 521

Query: 356 VSKG 359
           ++KG
Sbjct: 522 IAKG 525



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 36/242 (14%)

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           ML  R  P ++ +N ++  L ++ +   A+ L  +MQ+  + PD FT    I+  C  G 
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLING------------------------------- 478
           +  +  V   I     +    T N L+ G                               
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 479 ----LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
               LCK+G  ++A KL   ++ +   P+VV  +T+I  LCK+  +++A DL  +M+A+ 
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
             P+ +T+ TL+ GF    +  +   LL++M   K +  ++   + ++D L K+ K +E 
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMIL-KNINPNVYTYTILMDALCKEGKVKEA 239

Query: 595 LN 596
            N
Sbjct: 240 KN 241


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/582 (36%), Positives = 324/582 (55%), Gaps = 58/582 (9%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T + A+  F+ M++M+P P    F  LLT +AK K + T++SL  +++S G+ P+++ L+
Sbjct: 41  TIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLH 100

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +LIN  C +     AF VL +IL+    P+T TF  LI G+C EG+I EA  LF K+   
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGE 160

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+VVT+ TLINGLC+  NT  A++L   MV +    C+P+V  YN+IID LCKD  V
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN---CQPNVFAYNTIIDSLCKDRQV 217

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  L  +M  + I+P++ TYNSLI   C + +WK    L  EM+D+ + PDVV+FN +
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL------------------- 341
           ++  CK+GK+ + + +++ MIQRGV P+ VTY +LMDG CL                   
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337

Query: 342 ----------------VGRISRA-------------------RELFVSMVSKGCRHDVYS 366
                           + RI +A                    ++F +MV KGC  +V S
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVIS 397

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN LIN  CK Q+++ A+ L+ EM  + + P  +TY+TL+ GL  V  L DA+ L  +M 
Sbjct: 398 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
               +P+  T+   +D LCKN ++ EA+ + +AI     +  I+  N  I+G+C+ G L+
Sbjct: 458 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 517

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A  LF  L  KG  PDV T S MI+ LC+ G +D+A+ L  +M+   C  +   + T+ 
Sbjct: 518 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 577

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           RGF++NN+ S+ + LL +M A     +D S  +  V +LS D
Sbjct: 578 RGFLRNNETSRAIQLLQEMVARGF-SADASTMTLFVKMLSDD 618



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 3/255 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  FD M+     P + S+  L+    K ++ D  + LF  +    L PD    + L
Sbjct: 377 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 436

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC +     A  +   ++     PN VT+  L++ LC    + EA  L K +     
Sbjct: 437 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 496

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           DP++   N  I+G+CR      A  LF  + ++     +PDV TY+ +I+GLC+ G +D+
Sbjct: 497 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG---LQPDVWTYSIMINGLCRRGLLDE 553

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M +     N   YN++  GF   ++   A  L  EM+  G   D  T    + 
Sbjct: 554 ASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVK 613

Query: 303 YNCKDGKMDKVNRLL 317
               DG    + ++L
Sbjct: 614 MLSDDGLDQSLKQIL 628



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 1/227 (0%)

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           +N L+ +  K +     + L  +M S  I P++ T + L++    +  +G A  ++ K+ 
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                PD+ TF T I G+C  G + EA+ +F  +        + TY  LINGLCK+G   
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +L   +  K   P+V   +T+I  LCK+ Q+ +A +L  +M  K   P   T+ +L+
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
                  +   V  LL++M   K++   +S ++ VVD L K+ K  E
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNT-VVDALCKEGKVTE 289


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 199/509 (39%), Positives = 302/509 (59%), Gaps = 3/509 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ M+ M+ +P +  F  +L  L K K + T +SL K++   G+ PDL  L++L
Sbjct: 114 HDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSIL 173

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C +G  + +F VLG+IL+  + PNT+    L+ GLC +G + ++     K+     
Sbjct: 174 INCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGF 233

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V++ TL+NGLC+   T  A+KL   M+ +     +PDVV YN+IIDGLCKD  V++
Sbjct: 234 QMNQVSYGTLLNGLCKIGETRCAIKLLR-MIEDRST--RPDVVMYNTIIDGLCKDKLVNE 290

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +   +M  R I P+VITY++LICGFC       A  L  EM    + PDV T+  +I+
Sbjct: 291 AYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILID 350

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+ +   LL +M + GV P+ VTY++LMDG+CLVG +  A+++F +MV      
Sbjct: 351 ALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNP 410

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V SYNI+IN  CK + V++A+ L REML + + P+ +TYN+L+ GL + G +  AL L+
Sbjct: 411 SVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLM 470

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            ++       D  T+ + +DGLCKN  + +A+ +F  ++    +    TY  LI+GLCK 
Sbjct: 471 KELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 530

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            RLK A KLF  +  KG   DV T + MI  LCKEG +D+A  +   ME   C+P  VTF
Sbjct: 531 ARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTF 590

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             ++R   + ++  K   LLH+M A+ L+
Sbjct: 591 EIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 249/524 (47%), Gaps = 83/524 (15%)

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING--LCA--- 163
           + G+ P+L  L++LINCL  +G  + +F VLG+IL+  + PN++T   L+ G   CA   
Sbjct: 4   AKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKL 63

Query: 164 ----EGR------------------------------------------IMEAARLFKKL 177
               E R                                          + +A   F  +
Sbjct: 64  PRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGM 123

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM---------------VNEF------ 216
            +    P+++ F  ++  L + ++   A+ L ++M               +N F      
Sbjct: 124 LLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQM 183

Query: 217 -------GAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
                  G I K    P+ +   +++ GLC  G V K+     ++  +    N ++Y +L
Sbjct: 184 AFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTL 243

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + G C + + + A  L   + D   +PDVV +N +I+  CKD  +++       M  RG+
Sbjct: 244 LNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGI 303

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD +TY++L+ GFCL G++  A  L   M  K    DVY+Y ILI+A CK+ K+++A  
Sbjct: 304 FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKN 363

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L   M  E ++P+V+TY+TL+ G   VG + +A ++   M   +V P   ++   I+GLC
Sbjct: 364 LLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLC 423

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K   V EA+ + + + +        TYN LI+GLCK GR+ +A  L   L H+G   DV+
Sbjct: 424 KGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVI 483

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           T ++++  LCK   +DKA  L + M+ +   P++ T+  L+ G 
Sbjct: 484 TYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 527



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 158/332 (47%), Gaps = 32/332 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA  F+  M      P + +++ L+       Q     SL   +    + PD++   +L
Sbjct: 289 NEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTIL 348

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G    A  +LG + +    PN VT++ L++G C  G +  A ++F  +     
Sbjct: 349 IDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV 408

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------FGAICK--------- 221
           +P+V ++N +INGLC+ ++   A+ L  EM+++               +CK         
Sbjct: 409 NPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALD 468

Query: 222 -----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                       DV+TY S++DGLCK+  +DKA  L ++MK+R I PN  TY +LI G C
Sbjct: 469 LMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLC 528

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                K A+ LF  ++  G   DV T+N MI   CK+G +D+   +   M   G  PD V
Sbjct: 529 KGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAV 588

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           T+  ++          +A +L   M++KG  H
Sbjct: 589 TFEIIIRSLFEKDENDKAEKLLHEMIAKGLLH 620



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 157/359 (43%), Gaps = 52/359 (14%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG--FCLVG--R 344
           G+ P++VT + +IN     G+M     +L  +++ G  P+++T  +LM G   C +   R
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPR 65

Query: 345 ISRARELFVSM-VSKGCRHDV-----------YSYNILINANCKDQKVEDAVCLYREMLS 392
           +   R     M +S    H +           + +            V DAV  +  ML 
Sbjct: 66  MIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLL 125

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD-----------------SF 435
            R  PS+I +  +L  L ++ +   A+ L  +M++  + PD                 +F
Sbjct: 126 MRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAF 185

Query: 436 TFA------------------TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           +F+                  T + GLC  G V +++     +     ++   +Y  L+N
Sbjct: 186 SFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLN 245

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           GLCK+G  + A KL   ++ +   PDVV  +T+I  LCK+  +++A D   +M ++   P
Sbjct: 246 GLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP 305

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
             +T+ TL+ GF    +      LL++M   K +  D+   + ++D L K+ K +E  N
Sbjct: 306 DVITYSTLICGFCLAGQLMGAFSLLNEMTL-KNINPDVYTYTILIDALCKEGKLKEAKN 363


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/528 (38%), Positives = 314/528 (59%), Gaps = 6/528 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  F+ ++ ++P P +  F  LL  L K K Y TV+SL K+++ + + P+++ L +LI
Sbjct: 52  DAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILI 111

Query: 124 NCLCKMG--ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           NCLC         AF  LG++ +    P  VTF  L+NGLC++ +I++A +LF ++    
Sbjct: 112 NCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMG 171

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+++T+ T+I GLC+  +T  AL+L ++M  E G  CKPDVV YN++ID LCKD   +
Sbjct: 172 FAPSLITYTTIIKGLCKIGHTTNALQLLKKM-EEKG--CKPDVVAYNTVIDSLCKDRRAN 228

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A     +M D+ I PNV+TY+S++ GFC +    EA  LF +M+   V P+ VTF  ++
Sbjct: 229 EAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILV 288

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK+G + +  R+ E+M + GV PD  TY++LMDG+CL  ++  A++LF  MV KG  
Sbjct: 289 DGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFA 348

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             V  YNILIN +CK +++ +A  L  EM    + P  +TY+TL+ G  Q G    A KL
Sbjct: 349 PSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKL 408

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
             +M    ++PDS T++  +DGLCK+G + EA ++ +A++  K E  I  YN LI G+C 
Sbjct: 409 FKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCN 468

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G+L+ A +LF  L  KG  P VVT + MI  L KEG  ++A ++   M    C+P+  T
Sbjct: 469 FGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCT 528

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           +   ++GF++N   S  V L+ +M       +D S    ++DL S D+
Sbjct: 529 YNVAIQGFLRNGDPSNAVRLIEEMVGRGF-SADSSTFQMLLDLESNDE 575



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 170/354 (48%), Gaps = 38/354 (10%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +NEA+YFF  M+     P + +++ +L       Q +   SLFK++    + P+     +
Sbjct: 227 ANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTI 286

Query: 122 LINCLCKMGITSGAFVVL--------------------GRILRS---------------C 146
           L++ LCK G+   A  V                     G  L+S                
Sbjct: 287 LVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKG 346

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F P+   +N LING C   R+ EA  L  ++      P+ VT++TL+ G C+     VA 
Sbjct: 347 FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQ 406

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           KLF+EM + +G +  PD +TY+ ++DGLCK G +D+A  LL  M++  I P++  YN LI
Sbjct: 407 KLFKEMCS-YGLL--PDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILI 463

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C     + A+ LF  +   G+QP VVT+  MI+   K+G  ++   +   M+  G  
Sbjct: 464 QGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCL 523

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           P++ TYN  + GF   G  S A  L   MV +G   D  ++ +L++    D+ +
Sbjct: 524 PNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESNDEII 577



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 38/227 (16%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             V DAV  + ++L  R  P V+ +N LL  L +  +    + L  +M L+++ P+ +T 
Sbjct: 48  HSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTL 107

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR--LKTACKLFHRL 495
                                                LIN LC   R  +  A     ++
Sbjct: 108 TI-----------------------------------LINCLCHSNRDHVHFAFSALGKM 132

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G  P  VT  T+++ LC + ++  A  L  ++      PS +T+ T+++G  +    
Sbjct: 133 FKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHT 192

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +  + LL KM  EK    D+   + V+D L KD++  E +  F  ++
Sbjct: 193 TNALQLLKKM-EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMV 238


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/526 (38%), Positives = 304/526 (57%), Gaps = 13/526 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  M+  KP P   SF+ LL  L   K Y +VVS+F+ ++   +  D F L+ +
Sbjct: 54  DDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTV 113

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL---NV 179
           +N  C M  T   F VL    +     N VTF  LI GL AE ++ +A  LFKKL   N+
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             C+P+ V + T+++GLC+  +T  A  L   M      I KPD   YN +ID  CKDG 
Sbjct: 174 --CEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQ---GITKPDTCIYNIVIDAFCKDGM 228

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D A  LL +MK +NI P++ITY SLI G   +  W++ + LF+EM+   + PDV TFN+
Sbjct: 229 LDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNS 288

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  CK+GK++    ++  MI++GV P+ +TYN +MDG+CL G++ RAR +F SM+ KG
Sbjct: 289 VIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKG 348

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              D+ SY  LIN   + +K++ A+ L+RE+    ++PS++T + LL GLF+VG    A 
Sbjct: 349 IEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAK 408

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
              D+MQ    +P+ +T  T + G  KNG V EA+  F  +   + +  I+ Y  +INGL
Sbjct: 409 IFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGL 468

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK G+L  A   F +L   G  PDV+T + MI   C+EG +D+A D+L  ME   C+P  
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDN 528

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
            T+  ++RGF +++K S++   L ++A +       S  +  V+LL
Sbjct: 529 RTYNVIVRGFFRSSKVSEMKAFLKEIAGK-----SFSFEAATVELL 569



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 212/459 (46%), Gaps = 7/459 (1%)

Query: 40  HFKDGTSIAKFLNDRHKSGNITSN---EAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNK 95
           HFK G    +        G    N   +AV+ F  +++     P    +  ++  L K  
Sbjct: 133 HFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKG 192

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
                  L + +      PD  + N++I+  CK G+  GA  +L  + +    P+ +T+ 
Sbjct: 193 HTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYT 252

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+GL    +  +   LF ++      P+V TFN++I+GLC+      A ++   M+ E
Sbjct: 253 SLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMI-E 311

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            G   +P+ +TYN ++DG C  G + +A+ +   M D+ I P++I+Y +LI G+      
Sbjct: 312 KGV--EPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKM 369

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            +A  LF E+  NG++P +VT + ++    + G+ +      + M   G  P+  T+ +L
Sbjct: 370 DKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTL 429

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           + G+   G +  A   F  +  +    ++  Y  +IN  CK+ K++ A   + ++    +
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGL 489

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P VITY  ++SG  Q G L +A  ++ KM+ N  +PD+ T+   + G  ++  V E   
Sbjct: 490 HPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKA 549

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             + I          T   L++ + +   L      FHR
Sbjct: 550 FLKEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFHR 588



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 159/364 (43%), Gaps = 36/364 (9%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D A  L  QM      P+ ++++ L+     +  +     +F E+    +  D    + 
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL------------------------ 335
           ++N  C   + D    +L +  ++G+  + VT+ +L                        
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 336 ------------MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
                       MDG C  G   +A +L   M     + D   YNI+I+A CKD  ++ A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EM  + I P +ITY +L+ GL ++        L  +M   ++ PD  TF + IDG
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDG 292

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LCK G V +A ++   +     E    TYN +++G C  G++  A ++F  +  KG  PD
Sbjct: 293 LCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPD 352

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +++ + +I+   ++ +MDKA  L  ++      PS VT   LLRG  +  +     +   
Sbjct: 353 IISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFD 412

Query: 564 KMAA 567
           +M A
Sbjct: 413 EMQA 416


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 203/547 (37%), Positives = 317/547 (57%), Gaps = 4/547 (0%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           + S  I+ ++A+  F  M +M P P +  F   L  +AK KQY TVV L  +++  G+  
Sbjct: 67  NSSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTH 126

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
            ++ LN+LINCLC++     A  V G++ +    P+ +TF  LING+C EG+I  A  L+
Sbjct: 127 TVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELY 186

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            ++     +P+V+++NTLINGLC + NT +A+ +F++M       CKP+VVTYN+IID L
Sbjct: 187 NEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNG---CKPNVVTYNTIIDSL 243

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CKD  V+ A + L +M  R I P+ ITYNS++ G CC+    EA  LF  M  NG +PDV
Sbjct: 244 CKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDV 303

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           VT+N +I+   KD  ++     L  M+ +G+ PD VTY +++ G C +G+++ A  LF  
Sbjct: 304 VTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKK 363

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M  KGC+ DV +YN +I++ CKD+ V DA+    EM+   I P+ +TY+T+L G   +G 
Sbjct: 364 MEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +A +L  +M   +V+P++ TF+  +DGLC+ G V EA  VF+ +     E  I TYN 
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L+NG C   ++  A K+F  +  KG  PD+ + + +I+  C   +MDKA  LL  M  K 
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
             P+ VT+ T+++G     +      L  KM +  ++ + L   S +++ L K     E 
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPT-LMTYSILLNGLCKHGHLDEA 602

Query: 595 LNQFRHL 601
           L  F+ +
Sbjct: 603 LKLFKSM 609



 Score =  315 bits (806), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 172/495 (34%), Positives = 280/495 (56%), Gaps = 32/495 (6%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  ++ M++    P + S+  L+  L  +   +  V +FK++  NG  P++   N +I+
Sbjct: 182 AVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIID 241

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK  + + A   L  ++     P+ +T+N +++GLC  G++ EA RLFK++    C P
Sbjct: 242 SLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKP 301

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------------FGAI------- 219
           +VVT+N +I+ L + R    A     EMV++                   G +       
Sbjct: 302 DVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLF 361

Query: 220 -------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                  CKPDVV YN+IID LCKD  V+ A E L +M DR I PN +TY++++ GFC +
Sbjct: 362 KKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNL 421

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
               EA  LF EM+   V P+ +TF+ +++  C++G + +   + E M ++GV P+  TY
Sbjct: 422 GQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTY 481

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N+LM+G+CL  +++ AR++F  MV KGC  D++SYNILIN  C  ++++ A  L  +M  
Sbjct: 482 NALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSV 541

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           +++ P+ +TYNT++ GL  VG L DA +L  KM  + ++P   T++  ++GLCK+G + E
Sbjct: 542 KKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDE 601

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A+++F++++  K E  I  Y  LI G+   G+L+ A  LF +L   G  P   T + MI 
Sbjct: 602 ALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIK 661

Query: 513 WLCKEGQMDKANDLL 527
            L KEG  D+A +L 
Sbjct: 662 GLLKEGLSDEAYELF 676



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 225/434 (51%), Gaps = 32/434 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A+ F   M+     P   ++  ++  L    Q +    LFKR+  NG  PD+   N++
Sbjct: 250 NDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNII 309

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K  + + A   L  ++     P+ VT+  +++GLC  G++ EA RLFKK+    C
Sbjct: 310 IDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGC 369

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------------------------- 215
            P+VV +NT+I+ LC+ R    A++   EMV+                            
Sbjct: 370 KPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQ 429

Query: 216 -----FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                 G    P+ +T++ ++DGLC++G V +A+ +   M ++ + PN+ TYN+L+ G+C
Sbjct: 430 LFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYC 489

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                 EA+ +F  M+  G  PD+ ++N +IN  C   +MDK   LL  M  + + P+TV
Sbjct: 490 LRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTV 549

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TYN++M G C VGR+  A+ELF  M S G    + +Y+IL+N  CK   +++A+ L++ M
Sbjct: 550 TYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSM 609

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
             +++ P +I Y  L+ G+F  G L  A  L  K+  + + P   T+   I GL K G  
Sbjct: 610 KEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLS 669

Query: 451 LEAVQVFQAIRNCK 464
            EA ++F+  +  K
Sbjct: 670 DEAYELFRKWKMMK 683


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 196/526 (37%), Positives = 311/526 (59%), Gaps = 13/526 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  M++ KP P + SF+ LL  +   K Y +VVSLF+ ++   +    F+L+++
Sbjct: 54  DDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIV 113

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL---NV 179
           +N  C M  T   F VL    +     N VTF  LI GL AE ++ +A  LFKKL   N+
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             C+PN V + T++NGLC+  +T  A  L   M  E G+  KP+  TY  +ID  CKDG 
Sbjct: 174 --CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLM--EQGS-TKPNTRTYTIVIDAFCKDGM 228

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D A  LL +MK ++I P++ TY++LI   C +  W+  + LF+EM+   + P+V TFN+
Sbjct: 229 LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNS 288

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  CK+GK++    ++  MI++GV+PD +TYN ++DG+ L G++ RARE+F SM++K 
Sbjct: 289 VIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKS 348

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              D+ SYNILIN   + +K+++A+ + RE+  + ++PS++T N LL GLF++G    A 
Sbjct: 349 IEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
              D+M     +PD +T  T + G  KNG V EA+  F  +   + +  I+ Y  +I+GL
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK G+L  A   F +L   G  PDV+T + MI   C+EG +D+A D+L  ME   C+   
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADN 528

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
            T+  ++RGF+++NK S++   L ++A +       S  +  V+LL
Sbjct: 529 RTYNVIVRGFLRSNKVSEMKAFLEEIAGK-----SFSFEAATVELL 569



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 199/425 (46%), Gaps = 7/425 (1%)

Query: 40  HFKDGTSIAKFLNDRHKSGNITSN---EAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNK 95
           HFK G    +        G    N   +AV+ F  +++     P    +  ++  L K  
Sbjct: 133 HFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKG 192

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
                  L + +      P+     ++I+  CK G+  GA  +L  + +    P+  T++
Sbjct: 193 HTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYS 252

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+ LC   +      LF ++      PNV TFN++I+GLC+      A ++   M+ E
Sbjct: 253 TLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMI-E 311

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            G    PDV+TYN IIDG    G VD+A+E+   M +++I P++I+YN LI G+      
Sbjct: 312 KGV--DPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKI 369

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            EA  +  E+   G++P +VT N +++   + G+        + M+  G  PD  T+ +L
Sbjct: 370 DEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTL 429

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           + G+   G +  A   F  +  +    ++  Y  +I+  CK+ K++ A   + ++    +
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGL 489

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P VITY  ++SG  Q G L +A  ++ KM+ N  + D+ T+   + G  ++  V E   
Sbjct: 490 HPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKA 549

Query: 456 VFQAI 460
             + I
Sbjct: 550 FLEEI 554



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 153/309 (49%), Gaps = 3/309 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI +   P + +F  ++  L K  + +    + + +   G+ PD+   N++I+     G 
Sbjct: 274 MIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ 333

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   ++     P+ +++N LING   + +I EA ++ ++++     P++VT N 
Sbjct: 334 VDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++GL     T  A   F+EM++  G I  PD+ T+ +++ G  K+G V++A     +++
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSA-GHI--PDLYTHCTLLGGYFKNGLVEEAMSHFHKLE 450

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R  + N+  Y ++I G C      +A   F ++   G+ PDV+T+ AMI+  C++G +D
Sbjct: 451 RRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLD 510

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   +L  M   G   D  TYN ++ GF    ++S  +     +  K    +  +  +L+
Sbjct: 511 EAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLM 570

Query: 372 NANCKDQKV 380
           +   +D  +
Sbjct: 571 DIIAEDPSI 579



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 180/433 (41%), Gaps = 72/433 (16%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D A  L  QM      P+V +++ L+     +  +     LF E+    +       + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL------------------------ 335
           ++N  C   + D    +L +  ++G+  + VT+ +L                        
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 336 ------------MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE-- 381
                       M+G C  G   +A +L   M     + +  +Y I+I+A CKD  ++  
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 382 -----------------------DAVC----------LYREMLSERIRPSVITYNTLLSG 408
                                  DA+C          L+ EM+   I P+V T+N+++ G
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G + DA +++  M    V PD  T+   IDG    G V  A ++F ++ N   E  
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPD 352

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           I +YN LING  +  ++  A ++   +  KG  P +VTC+ ++H L + G+   A +   
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +M +   +P   T CTLL G+ +N    + +   HK+   +   +++ + + V+D L K+
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR-EDTNIQIYTAVIDGLCKN 471

Query: 589 KKYRECLNQFRHL 601
            K  +    F  L
Sbjct: 472 GKLDKAHATFEKL 484



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 3/259 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A   FD MI     P + S+ IL+   A+ K+ D  + + + ++  GL P +   N+L
Sbjct: 335 DRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVL 394

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ L ++G T  A      +L +   P+  T   L+ G    G + EA   F KL     
Sbjct: 395 LHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRE 454

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           D N+  +  +I+GLC+      A   FE++    G    PDV+TY ++I G C++G +D+
Sbjct: 455 DTNIQIYTAVIDGLCKNGKLDKAHATFEKL-PLIG--LHPDVITYTAMISGYCQEGLLDE 511

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK++L +M+D     +  TYN ++ GF   +   E K    E+       +  T   +++
Sbjct: 512 AKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571

Query: 303 YNCKDGKMDKVNRLLELMI 321
              +D  + +    ++L I
Sbjct: 572 IIAEDPSITRKMHWIKLHI 590



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 116/259 (44%), Gaps = 8/259 (3%)

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A  LF  MV       V S++ L+ A    +     V L+RE+   RI       + +++
Sbjct: 56  AFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVN 115

Query: 408 G--LFQVGNLGDALKLIDKMQLNDVVP-DSFTFATYIDGLCKNGFVLEAVQVFQA-IRNC 463
              L    +LG ++  I        +P +  TF T I GL     V +AV +F+  +R  
Sbjct: 116 SCCLMHRTDLGFSVLAI---HFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
            CE     Y  ++NGLCK G  + A  L   ++     P+  T + +I   CK+G +D A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             LL +M+ K+  P   T+ TL+    + ++   V  L  +M    +  +  + +S V+D
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNS-VID 291

Query: 584 LLSKDKKYRECLNQFRHLL 602
            L K+ K  +     R+++
Sbjct: 292 GLCKEGKVEDAEEIMRYMI 310


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  368 bits (944), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 198/512 (38%), Positives = 304/512 (59%), Gaps = 3/512 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+ ++ +P +  F  +L  LAK KQY T +SL K++   G+  +   LN+LINC C +G 
Sbjct: 1   MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + +F VLG+IL+  + P+T+T N L+ GLC +G + ++     K+       + V++ T
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+NGLC+   T  A+KL   M+ +     +P+VV YN+IIDGLCKD  V++A +L  +M 
Sbjct: 121 LLNGLCKIGETRCAVKLLR-MIEDRST--RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMD 177

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R I P+ ITY +LI GFC +     A  L  EM+   + P V  +N +IN  CK+G + 
Sbjct: 178 ARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVK 237

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL +M + G+ P  VTY++LMDG+CLVG +  A+++F +MV  G   +VYSYNI+I
Sbjct: 238 EAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMI 297

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N  CK ++V++A+ L REML + + P  +TYN+L+ GL + G +  AL L+++M      
Sbjct: 298 NGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQP 357

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            D  T+ + +D LCKN  + +A  +F  ++    +  + TY  LI+GLCK GRLK A +L
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQEL 417

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F  L  KG   DV T + MI  LCKEG  D+A  +   ME   C+P+ VTF  ++R   +
Sbjct: 418 FQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFE 477

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            ++  K   LLH+M A+ L+V D  ++   V 
Sbjct: 478 KDENDKAEKLLHEMIAKGLLVLDFKVADVFVQ 509



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 194/381 (50%), Gaps = 3/381 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           ++++F D ++         S+  LL  L K  +    V L + +      P++ + N +I
Sbjct: 98  KSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTII 157

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK  + + A+ +   +      P+ +T+  LI G C  G++M A  L  ++ +   +
Sbjct: 158 DGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNIN 217

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P V  +N LIN LC+  N   A  L   M  E     KP VVTY++++DG C  G V  A
Sbjct: 218 PGVYIYNILINALCKEGNVKEAKNLLAVMTKEG---IKPGVVTYSTLMDGYCLVGEVQNA 274

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K++   M    +NPNV +YN +I G C      EA  L  EM+   + PD VT+N++I+ 
Sbjct: 275 KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 334

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G++     L+  M  RG   D VTY SL+D  C    + +A  LF+ M  +G +  
Sbjct: 335 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 394

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           +Y+Y  LI+  CK  ++++A  L++ +L +     V TY  ++SGL + G   +AL +  
Sbjct: 395 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 454

Query: 424 KMQLNDVVPDSFTFATYIDGL 444
           KM+ N  +P++ TF   I  L
Sbjct: 455 KMEDNGCIPNAVTFEIIIRSL 475



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 166/331 (50%), Gaps = 3/331 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   +  M      P   ++T L+       Q     SL   +    + P +++ N+L
Sbjct: 167 NEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNIL 226

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LCK G    A  +L  + +    P  VT++ L++G C  G +  A ++F  +     
Sbjct: 227 INALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGV 286

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +PNV ++N +INGLC+ +    A+ L  EM+++      PD VTYNS+IDGLCK G +  
Sbjct: 287 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMV---PDTVTYNSLIDGLCKSGRITS 343

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L+ +M  R    +V+TY SL+   C   +  +A  LF++M + G+QP + T+ A+I+
Sbjct: 344 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 403

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++     L + ++ +G   D  TY  ++ G C  G    A  +   M   GC  
Sbjct: 404 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIP 463

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +  ++ I+I +  +  + + A  L  EM+++
Sbjct: 464 NAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 494



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 152/304 (50%), Gaps = 9/304 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+   EA      M K    PG+ +++ L+       +      +F  +   G+ P+
Sbjct: 232 KEGNV--KEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPN 289

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N++IN LCK      A  +L  +L     P+TVT+N LI+GLC  GRI  A  L  
Sbjct: 290 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 349

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +++      +VVT+ +L++ LC+ +N   A  LF +M  E G   +P + TY ++IDGLC
Sbjct: 350 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM-KERG--IQPTMYTYTALIDGLC 406

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G +  A+EL   +  +    +V TY  +I G C    + EA  +  +M DNG  P+ V
Sbjct: 407 KGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAV 466

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           TF  +I    +  + DK  +LL  MI +G+    V    + D F +     +A +L   M
Sbjct: 467 TFEIIIRSLFEKDENDKAEKLLHEMIAKGL---LVLDFKVADVF-VQNENDKAEKLLHEM 522

Query: 356 VSKG 359
           ++KG
Sbjct: 523 IAKG 526



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 1/170 (0%)

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P    F   +  L K    L A+ + + +          T N LIN  C +G++  +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
             ++   G  PD +T +T++  LC +G++ K+      + A+      V++ TLL G  +
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             + ++  V L +M  ++    ++ + + ++D L KDK   E  + +  +
Sbjct: 128 IGE-TRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM 176


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  368 bits (944), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 196/519 (37%), Positives = 307/519 (59%), Gaps = 5/519 (0%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK--NKQYDTVVSLFKRLNSNGLF 113
           KS +   N  V  F  M++M+P+P +  F  +L  + K  N  Y T +SL  +L   G+ 
Sbjct: 32  KSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGIT 91

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P +   N+L+NC C +G  + AF +  +IL+  + P T+TFN LING+C  G++ EA   
Sbjct: 92  PTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHF 151

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
              +       + V++ TLINGLC+   T  AL++ +++    G +   DVV YN II+ 
Sbjct: 152 HDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIE---GKLVNTDVVMYNIIINS 208

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCKD  V  A +L  +M  + I+P+V+T+NSLI GFC V   KEA  LF EM+   + PD
Sbjct: 209 LCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPD 268

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           V TF+ +++  CKDG + +   +L +M+++GV PD VTY+SLMDG+CLV  +++A+ +F 
Sbjct: 269 VYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFS 328

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
           +M   G     +SYNI+IN   K + V++A+ L++EM  + I P  +TYN+L+ GL ++G
Sbjct: 329 TMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLG 388

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            +  A +L+D+M  N +  D  T+ + ID LCKN  + +A+ + + I++   +  + TYN
Sbjct: 389 RISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYN 448

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI+GLCK GRLK A  +F  L  KG   +  T + MI+ LCKEG  ++A  LL  ME  
Sbjct: 449 ILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENN 508

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             +P  VT+ T++R   + ++  K   LL +M    L++
Sbjct: 509 GIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLLL 547



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 71/139 (51%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++  L+ +L KN   D  ++L K++   G+ P ++  N+LI+ LCK G    A  V   +
Sbjct: 411 TYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDL 470

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L   ++ N  T+N +INGLC EG   EA  L  K+      P+ VT+ T+I  L R    
Sbjct: 471 LIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDEN 530

Query: 203 LVALKLFEEMVNEFGAICK 221
             A KL  EM+     +CK
Sbjct: 531 EKAEKLLREMIIRGLLLCK 549



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 38/228 (16%)

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN--LGDALKLIDKMQLNDVVPDS 434
           D  V + V  +  ML  R  PS++ +N +L  + +  N     A+ L  +++L  + P  
Sbjct: 35  DFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTI 94

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            TF   ++  C  G +  A  +F  I          T+N LING+C  G+LK A      
Sbjct: 95  VTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDH 154

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +   G   D V+  T+I+ LCK G+   A  +L  +E                       
Sbjct: 155 VIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEG---------------------- 192

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                         KLV +D+ + + +++ L KDK   +    +  ++
Sbjct: 193 --------------KLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMI 226


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  367 bits (943), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 226/581 (38%), Positives = 328/581 (56%), Gaps = 60/581 (10%)

Query: 31  NPKTDLSSHHFKDGTSIAKFLNDRH---------KSGNITSNEAVYFFDCMIKMKPSPGM 81
           NP+   S++H K   ++++ ++ +H         K GNITS +A+ FFD M++      +
Sbjct: 38  NPQIS-SANHPKSLHALSERISLQHGLPMFIHNCKKGNITSTQALQFFDLMMR-----SI 91

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            SF +LL  LAK K Y                                   S  F +  +
Sbjct: 92  ISFNLLLGALAKIKHY-----------------------------------SQVFSLYKK 116

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +  +  +PN  T N LIN LC   R+ E       +      P+VVT+ +LI GLC    
Sbjct: 117 MHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHR 176

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR------NI 255
              A +LF  M  + G  C P+VVTY ++I GLC+ G ++ A +L  +M +       N 
Sbjct: 177 ISEATRLFIRM-QKLG--CWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINC 233

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PN+ +YN +I   C +  WKEAK LF EM+D GV+PDVVTF+A+I+  CK+G + +  +
Sbjct: 234 KPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKK 293

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
            LE M+ RG+ PD  T+ SL++GFCLVG +  A+ELF+SM SKG   DV SY +LI   C
Sbjct: 294 FLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYC 353

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K   VE+A+ LY EML     P + T+  LL GLF  G +GDA KL   ++ + V  + +
Sbjct: 354 KTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLY 413

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
             + ++DGLCKNG + EA+++F  +++   +L IE++NCLI+GLCK  +L+TA +LF +L
Sbjct: 414 ICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKL 473

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             +G  PDVVT   MI+  CK GQ+D AN L   ME   C P+ +T+  LL GF +NNK 
Sbjct: 474 SQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKL 533

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
            +VV LLHKM  +K V    S+ + V D++SKD+K RE L+
Sbjct: 534 EEVVKLLHKM-IQKDVSLAASIYTIVEDMVSKDEKCREWLD 573



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 207/420 (49%), Gaps = 14/420 (3%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           TS+ K L   H+      +EA   F  M K+   P + ++  L+  L +    +  + L 
Sbjct: 165 TSLIKGLCMEHRI-----SEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLH 219

Query: 105 KR-LNSNGLF-----PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLI 158
           +  LN    +     P++F  N++I+ LCK+G    A  +   ++     P+ VTF+ LI
Sbjct: 220 QEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALI 279

Query: 159 NGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
           + LC EG ++EA +  + + +    P++ TF +LI G C   +   A +LF  M ++   
Sbjct: 280 DTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKG-- 337

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
             +PDV++Y  +I G CK   V++A +L  +M      P++ T+  L+ G        +A
Sbjct: 338 -YEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDA 396

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           K LF  +  + V  ++   +  ++  CK+G + +   L   +    +  D  ++N L+DG
Sbjct: 397 KKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDG 456

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C   ++  A ELF  +  +G + DV +Y I+IN  CK+ +V++A  L++ M      P+
Sbjct: 457 LCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPN 516

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           ++TY+ LL G ++   L + +KL+ KM   DV   +  +    D + K+    E + + Q
Sbjct: 517 LLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQ 576


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 195/528 (36%), Positives = 307/528 (58%), Gaps = 3/528 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  F+C+++  P+P    F  +L  L K+K Y TV+SLF+++   G+ P+    N+LI
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           NC C++G+   AF VL +IL+  + P+T+T N  I G C +G+I +A     KL      
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            + V++ TLINGLC+   T  AL+L   +    G + + DVV Y++IID +CKD  V+ A
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVD---GKLVQLDVVMYSTIIDSMCKDKNVNDA 229

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L  +M  R I+ N++TY++LI GFC V   K+A  LF +M    + PDV TFN +++ 
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDA 289

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK+G++ +    L +M+++G+ PD VTYNSLMDG+CLV  ++ A+ +  +M  +G    
Sbjct: 290 FCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTAT 349

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V SYNI+IN  CK + V+ A+ L++EM  ++I P+VITYN+L+ GL + G +  AL+LID
Sbjct: 350 VRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELID 409

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M      PD  T+++ +D LCKN  V +A+ +   +++      + TY  LI+GLCK G
Sbjct: 410 LMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGG 469

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           RL+ A  +F  L  KG    V T + MI   C  G  D+A  LL  M+  +C+P  +T+ 
Sbjct: 470 RLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYE 529

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
            ++      ++  K   LL +M    L+ S L   S  +  ++    +
Sbjct: 530 IIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHF 577



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 227/454 (50%), Gaps = 21/454 (4%)

Query: 4   KSSHRSFSLASKAGYR------------CNFWCSFGRPPNPKTDLSS----HHFKDGTSI 47
           K  H   SL  K  YR             N +C  G  P   + L+      +  D  ++
Sbjct: 84  KHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITL 143

Query: 48  AKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL 107
             F+      G I  ++A+ F D ++ +       S+  L+  L K  +    + L +R+
Sbjct: 144 NTFIKGFCLKGQI--HQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRV 201

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
           +   +  D+ + + +I+ +CK    + AF +   ++    + N VT++ LI+G C  G++
Sbjct: 202 DGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKL 261

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            +A  LF K+     +P+V TFN L++  C+      A      M+ +     KPD+VTY
Sbjct: 262 KDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG---IKPDIVTY 318

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           NS++DG C    V+ AK +L  M  R +   V +YN +I GFC +    +A  LF EM  
Sbjct: 319 NSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHH 378

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
             + P+V+T+N++I+  CK G++     L++LM  RG  PD +TY+S++D  C    + +
Sbjct: 379 KQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDK 438

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A  L + +  +G R ++Y+Y ILI+  CK  ++EDA  ++ ++L +    +V TY  ++ 
Sbjct: 439 AIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQ 498

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           G    G   +AL L+ KM+ N  +PD+ T+   I
Sbjct: 499 GFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 223/488 (45%), Gaps = 44/488 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   +  M+  + S  + +++ L++      +    + LF ++ S  + PD++  N+L
Sbjct: 227 NDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNIL 286

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK G    A   L  +++    P+ VT+N L++G C    +  A  +   ++    
Sbjct: 287 VDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGV 346

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
              V ++N +ING C+ +    A+KLF+EM ++      P+V+TYNS+IDGLCK G +  
Sbjct: 347 TATVRSYNIVINGFCKIKMVDQAMKLFKEMHHK---QIFPNVITYNSLIDGLCKSGRISY 403

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL+  M DR   P++ITY+S++   C      +A  L I++ D G++P++ T+  +I+
Sbjct: 404 ALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILID 463

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+++    + E ++ +G N    TY  ++ GFC  G    A  L   M    C  
Sbjct: 464 GLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIP 523

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +Y I+I +     + + A  L REM++  +  S + Y     G + +  +      +
Sbjct: 524 DAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEY-----GSWSLSFMAAPAHFL 578

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR--------IETYNC 474
           +         DS    +  +       +LE +        C C L         +E  + 
Sbjct: 579 NN--------DSLQCTSSQESGNWAKLLLERIY-------CDCVLTKSNMRDKDVECPSV 623

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +I   C   +             +G I DV T + MI   C  G  D++  LL  ME   
Sbjct: 624 IIYSTCDWSK-------------QGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNG 670

Query: 535 CVPSEVTF 542
           C+P  VT+
Sbjct: 671 CIPDAVTY 678



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 87/202 (43%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           V DAV L+  +L +   P  + +  +L  L +  +    L L  KM+   + P+   F  
Sbjct: 51  VVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+  C+ G +  A  V   I     E    T N  I G C  G++  A     +L   G
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
              D V+  T+I+ LCK G+   A +LL  ++ K      V + T++    ++   +   
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230

Query: 560 VLLHKMAAEKLVVSDLSLSSKV 581
            L  +M + ++  + ++ S+ +
Sbjct: 231 DLYSEMVSRRISSNIVTYSALI 252



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 1/186 (0%)

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           DA+ L + +   +  P    F   +  L K+      + +FQ +     +     +N LI
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           N  C++G +  A  +  ++   G  PD +T +T I   C +GQ+ +A +    + A    
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
             +V++ TL+ G  +  +    + LL ++   KLV  D+ + S ++D + KDK   +  +
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVDG-KLVQLDVVMYSTIIDSMCKDKNVNDAFD 231

Query: 597 QFRHLL 602
            +  ++
Sbjct: 232 LYSEMV 237


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 214/627 (34%), Positives = 344/627 (54%), Gaps = 38/627 (6%)

Query: 5    SSHRSFSLASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIA-----KFLNDRHKSGN 59
            ++  S S+  K+    +    F  PP  ++  +S   K GT  +     +++ D+ + G 
Sbjct: 866  AASSSRSILQKSDIPXSLSSLFKNPPQ-RSGSNSKSEKIGTKASLSPFERYVRDQCRFGI 924

Query: 60   ITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
            I  N+A+  FD  +  +P P   +F  LL  +AK   Y TV  +++++N  G+ PDL+ L
Sbjct: 925  IKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTL 984

Query: 120  NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
            N+LI+C C +      F V G  L+  F P+ VT   L+ G+  E  I +A +LF ++  
Sbjct: 985  NILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTK 1044

Query: 180  FACDPNVVTFNTLINGLCRTRNTLVALKLFEEM-------VNEFG----AICK------- 221
                 +  T+  LINGLC+ R T +A+KL E+M       V  +G    A+CK       
Sbjct: 1045 KGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEA 1104

Query: 222  -------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
                         PDVV Y+S++DGLC+ G + +A E   +M+ R I+ +V TYNSLI G
Sbjct: 1105 LDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHG 1164

Query: 269  FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
                  WKE       M+D G  PD  TF  +I+  CK+GK+ +  ++LELM  +G  PD
Sbjct: 1165 LSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPD 1224

Query: 329  TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
             +TYN+LM+G CLVG++  A +LF S+  +G + +V+SYNILIN  CKDQK+++A   + 
Sbjct: 1225 ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFE 1284

Query: 389  EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            EM  + ++PS +TYNTL+  L Q G +  A KL  +MQ         T+   +DGLCKNG
Sbjct: 1285 EMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNG 1344

Query: 449  FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
             + EA+ +FQ+I+  + +  IE ++ L++G+C+ G+L+ A K F  +   G  PD +  +
Sbjct: 1345 HLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYN 1404

Query: 509  TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
             +I+ LC +G + +A  LL  ME K C+P  +TF  +++  ++ N+  + + LL +M   
Sbjct: 1405 ILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNR 1464

Query: 569  KLVVSDLSLSSKVVDLLSKDKKYRECL 595
                 D +++S ++ L S D ++   L
Sbjct: 1465 NF-SPDEAVTSMLLCLASFDPQWHAAL 1490



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 17/265 (6%)

Query: 40   HFKDGTSIAKFLNDRHKSGNITS--------------NEAVYFFDCMIKMKPSPGMTSFT 85
              +D T + + L DR    N+ S              +EA  FF+ M      P   ++ 
Sbjct: 1240 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYN 1299

Query: 86   ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
             L+  L ++ +  T   LF  + + G F  L    +L++ LCK G    A  +   I ++
Sbjct: 1300 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKT 1359

Query: 146  CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
               PN   F+ L++G+C  G++ EA + F +++    +P+ + +N LINGLC       A
Sbjct: 1360 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 1419

Query: 206  LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
            +KL  +M  E G  C PD +T+N II  L K+  + +A +LL +M++RN +P+    + L
Sbjct: 1420 VKLLWQM-EEKG--CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476

Query: 266  ICGFCCVDDWKEAKCLFIEMMDNGV 290
            +C       W  A       +  GV
Sbjct: 1477 LCLASFDPQWHAALVSLPNALQKGV 1501


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  365 bits (936), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 190/536 (35%), Positives = 320/536 (59%), Gaps = 6/536 (1%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I  ++A+  F  MI+ +P P +  F+   + +A  KQ++ V+   K++  N
Sbjct: 35  ERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELN 94

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  +++ LN++INC C+   T  A+ VLG++++  + P+T TFN LINGLC E ++ EA
Sbjct: 95  GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEA 154

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L  ++    C PNVVT+N+++NG+C++ +T +AL L  +M        K DV TY++I
Sbjct: 155 VVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN---VKADVFTYSTI 211

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ID LC+DG +D A  L  +M+ + I  +++TYNSL+ G C    W +   L  +M    +
Sbjct: 212 IDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKI 271

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P+V+TFN +I+   K+GK+ + N L + MI +G++P+T+TYNSLMDG+C+  R+S A  
Sbjct: 272 IPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANN 331

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +   MV   C  D+ ++  LI   CK ++V++ + L+R++    +  + +TY+ L+ G  
Sbjct: 332 MLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFC 391

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           Q G L  A +L  +M    V+PD  T+   +DGLC NG + +A+++F+ ++  K  L I 
Sbjct: 392 QSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIV 451

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            Y  +I G+CK G+++ A  LF  L  KG  P+V+T + MI  LCK+G + +AN LL  M
Sbjct: 452 MYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 511

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           E     P++ T+ TL+R  +++   +    L+ +M +     +D S    V+D+LS
Sbjct: 512 EEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF-SADASSIKMVIDMLS 566



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 159/349 (45%), Gaps = 36/349 (10%)

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           +G+    V +   +     D K D    L + MI+    P  V ++    G     + + 
Sbjct: 24  SGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNL 83

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCK------------------------------- 376
             +    M   G  H++Y+ NI+IN  C+                               
Sbjct: 84  VLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 143

Query: 377 ----DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
               + KV +AV L   M+    +P+V+TYN++++G+ + G+   AL L+ KM   +V  
Sbjct: 144 GLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKA 203

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D FT++T ID LC++G +  A+ +F+ +     +  + TYN L+ GLCK G+     +L 
Sbjct: 204 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLL 263

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +  +  IP+V+T + +I    KEG++ +AN+L  +M  K   P+ +T+ +L+ G+   
Sbjct: 264 KDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQ 323

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           N+ S+   +L  M        D+   + ++    K K+  E +  FR +
Sbjct: 324 NRLSEANNMLDLMVRNN-CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKI 371


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  364 bits (934), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 185/535 (34%), Positives = 321/535 (60%), Gaps = 6/535 (1%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I  ++A+  F  MI+ +P PG+  F+   + +A+ KQ++ V+   K+L  N
Sbjct: 58  ERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  +++ LN++INC C+   T  A+ VLG++++  + P+T TFN LINGLC EG++ +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L  ++    C P++VT+N+++NG+CR+ +T +A  +  +M        K DV TY++I
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN---VKADVFTYSTI 234

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ID LC+DG +D A  L  +M+ + I  +V+TYNSL+ G C    W +   L  +M+   +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P+V+TFN +++   K+GK+ + N L + MI RG++P+ +TYN+LMDG+C+  R+S A  
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +   MV   C  D+ ++  LI   C  ++V+D + ++R +    +  + +TY+ L+ G  
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           Q G +  A +L  +M  + V+PD  T+   +DGLC NG + +A+++F+ ++  K +L I 
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            Y  +I G+CK G+++ A  LF  L  KG  P+V+T + MI  LCK+G + +AN LL  M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           E     P++ T+ TL+R  +++   +    L+ +M +     +D S    V+D+L
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF-SADASSIKMVIDML 588



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 35/310 (11%)

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           V F   +     D K D    L + MI+    P  V ++          + +   +    
Sbjct: 54  VCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQ 113

Query: 355 MVSKGCRHDVYSYNILINANCK-----------------------------------DQK 379
           +   G  H++Y+ NI+IN  C+                                   + K
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGK 173

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           V  AV L   M+    +P ++TYN++++G+ + G+   A  ++ KM+  +V  D FT++T
Sbjct: 174 VSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYST 233

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            ID LC++G +  A+ +F+ +     +  + TYN L+ GLCK G+      L   +  + 
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            +P+V+T + ++    KEG++ +AN+L  +M  +   P+ +T+ TL+ G+   N+ S+  
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353

Query: 560 VLLHKMAAEK 569
            +L  M   K
Sbjct: 354 NMLDLMVRNK 363


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  364 bits (934), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 195/509 (38%), Positives = 307/509 (60%), Gaps = 3/509 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ M+ M+ +P +  F  +L   AK K Y T VSL  RL   G+ PDL  LN+L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C MG  +  F VL +IL+  + P+TVT N LI GLC +G++ +A     KL     
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V++ TLING+C+  +T  A+K   ++    G + KPDVV YN+IID +CK   V +
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKID---GRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +M  + I+ +V+TYN+LI GFC V   KEA  L  EM+   + P+V T+N +++
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+ +   +L +M++  V PD +TY++LMDG+ LV  + +A+ +F +M   G   
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV++Y ILIN  CK++ V++A+ L++EM  + + P ++TY++L+ GL + G +     LI
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M+      D  T+++ IDGLCKNG +  A+ +F  +++ +    I T+  L++GLCK 
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GRLK A ++F  L  KG   +V T + MI+  CK+G +++A  +L  ME   C+P+  TF
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            T++    + ++  K   LL +M A  L+
Sbjct: 518 ETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 233/484 (48%), Gaps = 38/484 (7%)

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           R+L    TP  + FN +++          A  L  +L +    P+++T N LIN  C   
Sbjct: 49  RMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
                  +  +++        PD VT N++I GLC  G V KA     ++  +    N +
Sbjct: 109 QITFGFSVLAKILKRG---YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV 165

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           +Y +LI G C + D + A     ++     +PDVV +N +I+  CK   + +   L   M
Sbjct: 166 SYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEM 225

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
             +G++ D VTYN+L+ GFC+VG++  A  L   MV K    +VY+YNIL++A CK+ KV
Sbjct: 226 AVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A  +   ML   ++P VITY+TL+ G F V  +  A  + + M L  V PD  T+   
Sbjct: 286 KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 345

Query: 441 IDGLCKNGFVLEAVQVFQAIRN-----------------CKC-----------ELR---- 468
           I+G CKN  V EA+ +F+ +                   CK            E+R    
Sbjct: 346 INGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQ 405

Query: 469 ---IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
              + TY+ LI+GLCK G L  A  LF++++ +   P++ T + ++  LCK G++  A +
Sbjct: 406 PADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQE 465

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           +  D+  K    +  T+  ++ G  +     + + +L KM     + +  +  + ++ L 
Sbjct: 466 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 525

Query: 586 SKDK 589
            KD+
Sbjct: 526 KKDE 529



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 36/224 (16%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           Q V+DAV  +  ML  R  P +I +N +L    ++ +   A+ L  +++L  + PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
                                              N LIN  C MG++     +  ++  
Sbjct: 98  -----------------------------------NILINCFCHMGQITFGFSVLAKILK 122

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +G  PD VT +T+I  LC +GQ+ KA      + A+    ++V++ TL+ G  +      
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRA 182

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            +  L K+   +L   D+ + + ++D + K +   E    F  +
Sbjct: 183 AIKFLRKIDG-RLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEM 225


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  364 bits (934), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 194/526 (36%), Positives = 311/526 (59%), Gaps = 13/526 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  M++ KP P + SF+ LL  L   K Y +VVSLF+ ++   +    F+L+++
Sbjct: 54  DDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIV 113

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL---NV 179
           +N  C M  T   F VL    +     N V FN L+ GL AE ++ +A  LFKKL   N+
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENI 173

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             C+PN V + T++NGLC+  +T  A  L   M  E G+  KP+   Y+ +ID  CKDG 
Sbjct: 174 --CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLM--EQGS-TKPNTCIYSIVIDAFCKDGM 228

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D A  LL +MK ++I P++ TY++LI   C +  W+  + LF+EM+   + P+V TFN+
Sbjct: 229 LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNS 288

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  CK+GK++    ++  MI++GV+PD +TYN ++DG+ L G++ RARE+F SM++K 
Sbjct: 289 VIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKS 348

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              ++ SYNILIN   + +K+++A+ + RE+  + ++PS++T N LL GLF++G    A 
Sbjct: 349 IEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
              D+M     +PD +T  T + G  KNG V EA+  F  +   + +  I+ Y  +I+GL
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK G+L  A   F +L   G  PDV+T + MI   C+EG +D+A D+L  ME   C+   
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADN 528

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
            T+  ++RGF+++NK S++   L ++A +       S  +  V+LL
Sbjct: 529 RTYNVIVRGFLRSNKVSEMKAFLEEIAGK-----SFSFEAATVELL 569



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 213/459 (46%), Gaps = 7/459 (1%)

Query: 40  HFKDGTSIAKFLNDRHKSGNITSN---EAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNK 95
           HFK G    + + +    G    N   +AV+ F  +++     P    +  ++  L K  
Sbjct: 133 HFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKG 192

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
                  L + +      P+  + +++I+  CK G+  GA  +L  + +    P+  T++
Sbjct: 193 HTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYS 252

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+ LC   +      LF ++      PNV TFN++I+GLC+      A ++   M+ E
Sbjct: 253 TLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMI-E 311

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            G    PDV+TYN IIDG    G VD+A+E+   M +++I PN+I+YN LI G+      
Sbjct: 312 KGV--DPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKI 369

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            EA  +  E+   G++P +VT N +++   + G+        + M+  G  PD  T+ +L
Sbjct: 370 DEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTL 429

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           + G+   G +  A   F  +  +    ++  Y  +I+  CK+ K++ A   + ++    +
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGL 489

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P VITY  ++SG  Q G L +A  ++ KM+ N  + D+ T+   + G  ++  V E   
Sbjct: 490 HPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKA 549

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             + I          T   L++ + +   L      FHR
Sbjct: 550 FLEEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFHR 588



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 181/433 (41%), Gaps = 72/433 (16%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM-------------- 285
           +D A  L  QM      P+V++++ L+     +  +     LF E+              
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 286 ---------------------MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
                                   G+  + V FN ++     + K+     L + +++  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 325 V-NPDTVTYNSLMDGFCLVGRISRARELFV------------------------------ 353
           +  P+ V Y ++M+G C  G   +A +L                                
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 354 -----SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
                 M  K    D+++Y+ LI+A CK  + E+   L+ EM+   I P+V T+N+++ G
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G + DA +++  M    V PD  T+   IDG    G V  A ++F ++ N   E  
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           I +YN LING  +  ++  A ++   +  KG  P +VTC+ ++H L + G+   A +   
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +M +   +P   T CTLL G+ +N    + +   HK+   +   +++ + + V+D L K+
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR-EDTNIQIYTAVIDGLCKN 471

Query: 589 KKYRECLNQFRHL 601
            K  +    F  L
Sbjct: 472 GKLDKAHATFEKL 484


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 186/535 (34%), Positives = 319/535 (59%), Gaps = 6/535 (1%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I  ++A+  F  MI+ +P P +  F+   + +A+ KQ++ V+   K+L  N
Sbjct: 48  ERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 107

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  +++ LN++INC C+   T  A+ VLG++++  + P+T TFN LI GL  EG++ EA
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L  ++    C P+VVT+N+++NG+CR+ +T +AL L  +M        K DV TY++I
Sbjct: 168 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN---VKADVFTYSTI 224

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ID LC+DG +D A  L  +M+ + I  +V+TYNSL+ G C    W +   L  +M+   +
Sbjct: 225 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 284

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P+V+TFN +++   K+GK+ + N L + MI RG++P+ +TYN+LMDG+C+  R+S A  
Sbjct: 285 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 344

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +   MV   C  D+ ++  LI   C  ++V+D + ++R +    +  + +TY+ L+ G  
Sbjct: 345 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 404

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           Q G +  A +L  +M  + V+PD  T+   +DGLC NG + +A+++F+ ++  K +L I 
Sbjct: 405 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 464

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            Y  +I G+CK G+++ A  LF  L  KG  P+V+T + MI  LCK+G + +AN LL  M
Sbjct: 465 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 524

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           E     P++ T+ TL+R  +++   +    L+ +M +     +D S    V+D+L
Sbjct: 525 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF-SADASSIKMVIDML 578



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 156/352 (44%), Gaps = 38/352 (10%)

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           R I P+++   SL     C      + C   E   + +    V F   +     D K D 
Sbjct: 5   RLIQPHLLKTGSLRTDLLCTISSFFSSC---ERDFSSISNGNVCFRERLRSGIVDIKKDD 61

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              L + MI+    P  V ++          + +   +    +   G  H++Y+ NI+IN
Sbjct: 62  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 121

Query: 373 ANCK-----------------------------------DQKVEDAVCLYREMLSERIRP 397
             C+                                   + KV +AV L   M+    +P
Sbjct: 122 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 181

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            V+TYN++++G+ + G+   AL L+ KM+  +V  D FT++T ID LC++G +  A+ +F
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +     +  + TYN L+ GLCK G+      L   +  +  +P+V+T + ++    KE
Sbjct: 242 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 301

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           G++ +AN+L  +M  +   P+ +T+ TL+ G+   N+ S+   +L  M   K
Sbjct: 302 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 153/337 (45%), Gaps = 57/337 (16%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F+ + K K   G+  +T ++  + K  + +   +LF  L   G+ P++    ++
Sbjct: 445 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 504

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV--F 180
           I+ LCK G  S A ++L ++      PN  T+N LI     +G +  +A+L +++    F
Sbjct: 505 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 564

Query: 181 ACDPNVV--TFNTLINGLCR------------TRNTLVALKLFEEM-------VNEFGAI 219
           + D + +    + L++ + R            +R  L+ L   E++       V  F   
Sbjct: 565 SADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCN 624

Query: 220 CKPDVVTYNSI------IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
                +  N+I         L +D    +   +L + K+R++   V+  N L+       
Sbjct: 625 TITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVR--VLVTNELLT------ 676

Query: 274 DW--KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR---------LLELMIQ 322
            W  ++A+C    M+D  +  D V      +Y  + G+M +  R         L + MIQ
Sbjct: 677 -WGLEDAECDL--MVDLELPTDAV------HYAHRAGRMRRPGRKMTVVTAEELHKEMIQ 727

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           RG+ P+T+TY+SL+DGFC   R+  A ++   MV+KG
Sbjct: 728 RGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  361 bits (927), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 189/549 (34%), Positives = 324/549 (59%), Gaps = 7/549 (1%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I  ++A+  F  MI+ +P P +  F+   + +A+ KQ++ V+   K+L  N
Sbjct: 58  ERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  +++ LN++INC C+   T  A+ VLG++++  + P+T TFN LI GL  EG++ EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L  ++    C P+VVT+N+++NG+CR+ +T +AL L  +M        K DV TY++I
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN---VKADVFTYSTI 234

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ID LC+DG +D A  L  +M+ + I  +V+TYNSL+ G C    W +   L  +M+   +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P+V+TFN +++   K+GK+ + N L + MI RG++P+ +TYN+LMDG+C+  R+S A  
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +   MV   C  D+ ++  LI   C  ++V+D + ++R +    +  + +TY+ L+ G  
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           Q G +  A +L  +M  + V+PD  T+   +DGLC NG + +A+++F+ ++  K +L I 
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            Y  +I G+CK G+++ A  LF  L  KG  P+V+T + MI  LCK+G + +AN LL  M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           E     P++ T+ TL+R  +++   +    L+ +M +        S+   +  LLS  K+
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 594

Query: 591 --YRECLNQ 597
              R CL++
Sbjct: 595 LTLRYCLSK 603



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 156/352 (44%), Gaps = 38/352 (10%)

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           R I P+++   SL     C      + C   E   + +    V F   +     D K D 
Sbjct: 15  RLIQPHLLKTGSLRTDLLCTISSFFSSC---ERDFSSISNGNVCFRERLRSGIVDIKKDD 71

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              L + MI+    P  V ++          + +   +    +   G  H++Y+ NI+IN
Sbjct: 72  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131

Query: 373 ANCK-----------------------------------DQKVEDAVCLYREMLSERIRP 397
             C+                                   + KV +AV L   M+    +P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            V+TYN++++G+ + G+   AL L+ KM+  +V  D FT++T ID LC++G +  A+ +F
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +     +  + TYN L+ GLCK G+      L   +  +  +P+V+T + ++    KE
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           G++ +AN+L  +M  +   P+ +T+ TL+ G+   N+ S+   +L  M   K
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  361 bits (926), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 209/578 (36%), Positives = 318/578 (55%), Gaps = 12/578 (2%)

Query: 28  RPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITS-NEAVYFFDCMIKMKPSPGMTSFTI 86
           +  N   ++ SH  K  T    F+ ++ KSG + S +EA+ FF  M KM P P +  FT+
Sbjct: 23  KSTNINHEIQSHSNK--TQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTL 80

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           LL  + K K Y T +SL K ++S+ G+ PD F+LN++IN LC + + +  F VLG +L+ 
Sbjct: 81  LLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKL 140

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
              P+ VTF  LINGLC +G +  A  L   +       +V T+  LINGLC+   T  A
Sbjct: 141 GLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEA 200

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
           +    +M         P+VV Y++++DGLCKDG V +A  L L+M  + I PN++TY  L
Sbjct: 201 VGWLRKMEERN---WNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCL 257

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G C    WKEA  L  EMM  GV PD+ + N +++  CK+GK+ +   ++  MI  G 
Sbjct: 258 IQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGE 317

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD  TYNSL+D +CL  ++  A  +F  MVS+GC  D+ +Y  LI+  CK + +  A+ 
Sbjct: 318 VPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMH 377

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L  EM+     P V+T+ TL+ G  QVG    A +L   M     VP+  T A  +DGLC
Sbjct: 378 LLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLC 437

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K+  + EA+ +F A+     +L I  Y+ +++G+C  G+L TA +LF  L  KG   +V 
Sbjct: 438 KSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVY 497

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             + MI+   K+G +DKA DLL +ME   C+P   T+   ++G V   + ++ +  L  M
Sbjct: 498 AYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMM 557

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
             +   V D + +  +++ LS ++      N+ R  LF
Sbjct: 558 RDKGFSV-DATTTEMIINYLSTNQGD----NELREFLF 590


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  361 bits (926), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 186/535 (34%), Positives = 319/535 (59%), Gaps = 6/535 (1%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I  ++A+  F  MI+ +P P +  F+   + +A+ KQ++ V+   K+L  N
Sbjct: 58  ERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  +++ LN++INC C+   T  A+ VLG++++  + P+T TFN LI GL  EG++ EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L  ++    C P+VVT+N+++NG+CR+ +T +AL L  +M        K DV TY++I
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN---VKADVFTYSTI 234

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ID LC+DG +D A  L  +M+ + I  +V+TYNSL+ G C    W +   L  +M+   +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P+V+TFN +++   K+GK+ + N L + MI RG++P+ +TYN+LMDG+C+  R+S A  
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +   MV   C  D+ ++  LI   C  ++V+D + ++R +    +  + +TY+ L+ G  
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           Q G +  A +L  +M  + V+PD  T+   +DGLC NG + +A+++F+ ++  K +L I 
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            Y  +I G+CK G+++ A  LF  L  KG  P+V+T + MI  LCK+G + +AN LL  M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           E     P++ T+ TL+R  +++   +    L+ +M +     +D S    V+D+L
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF-SADASSIKMVIDML 588



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 156/352 (44%), Gaps = 38/352 (10%)

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           R I P+++   SL     C      + C   E   + +    V F   +     D K D 
Sbjct: 15  RLIQPHLLKTGSLRTDLLCTISSFFSSC---ERDFSSISNGNVCFRERLRSGIVDIKKDD 71

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              L + MI+    P  V ++          + +   +    +   G  H++Y+ NI+IN
Sbjct: 72  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131

Query: 373 ANCK-----------------------------------DQKVEDAVCLYREMLSERIRP 397
             C+                                   + KV +AV L   M+    +P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            V+TYN++++G+ + G+   AL L+ KM+  +V  D FT++T ID LC++G +  A+ +F
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +     +  + TYN L+ GLCK G+      L   +  +  +P+V+T + ++    KE
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           G++ +AN+L  +M  +   P+ +T+ TL+ G+   N+ S+   +L  M   K
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  361 bits (926), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 202/536 (37%), Positives = 307/536 (57%), Gaps = 18/536 (3%)

Query: 30  PNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLT 89
           PN    LS  HF             H   N+  N+A+  F+ M++M+P P +  F  +L 
Sbjct: 13  PNSTLLLSHTHF-------------HSLPNL--NDAIDSFNRMLRMRPPPPIIKFGKILG 57

Query: 90  MLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP 149
            L K K Y  V+ LF+R+  +G+  +   LN+LIN  C +   + AF V  +IL+  + P
Sbjct: 58  SLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQP 117

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           + +T+  LI GLC  G++ E+     +L       + V++ TLINGLC+   T  AL+L 
Sbjct: 118 DIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLL 177

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            ++    G IC+PDVV YN+IIDGLCKD  V  A +L  +M ++ + PNV+TY SLI GF
Sbjct: 178 RKIE---GEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGF 234

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C V    +A  L  EM+   V P+V TFN +++  CK+GKM +   L+ +M++ GV PD 
Sbjct: 235 CIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDV 294

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN+LMDG+ LV    +A+ +F  M   G   DV+SY+++I+   K + +++A+ L+  
Sbjct: 295 FTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEG 354

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M +E + P V+ Y++L+ GL + G +  ALK +D+M      P+  T+ + ID LCK+  
Sbjct: 355 MRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQ 414

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           V +A+ + + I++   +  + TYN L++GLCK GRL  A K+F  L  KG   DVVT S 
Sbjct: 415 VDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSI 474

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           MI+ LCKE   D+A  LL  ME K CVP  + + T++  F + +   K   LL +M
Sbjct: 475 MINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 207/400 (51%), Gaps = 3/400 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E++ F D ++         S+  L+  L K  Q    + L +++      PD+ + N +I
Sbjct: 137 ESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTII 196

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK  +   AF +   +      PN VT+  LI G C  G++ +A  L  ++ +   +
Sbjct: 197 DGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVN 256

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNV TFNTL++GLC+      A  L   M+ E      PDV TYN+++DG        KA
Sbjct: 257 PNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEG---VGPDVFTYNALMDGYFLVKEAGKA 313

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K +   M    +  +V +Y+ +I G   +    EA  LF  M +  V PDVV ++++I+ 
Sbjct: 314 KNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDG 373

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+++   + ++ M  RG  P+ +TY SL+D  C   ++ +A  L   +  +G + +
Sbjct: 374 LCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQAN 433

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           +Y+YNIL++  CKD ++ DA  +++++L +     V+TY+ +++GL +     +AL L+ 
Sbjct: 434 MYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLS 493

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           KM+    VPD+  + T I+   +     +A ++ + + +C
Sbjct: 494 KMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIDC 533



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 161/312 (51%), Gaps = 5/312 (1%)

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           P ++ F  ++    K      V  L + M   G+  + +T N L++ +C + +I+ A  +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  ++  G + D+ +Y  LI   C + +V++++  +  ++S+ I+   ++Y TL++GL +
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
           +G  G AL+L+ K++     PD   + T IDGLCK+  V +A  ++  +   +    + T
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y  LI G C +G+L  A  L + +  K   P+V T +T++  LCKEG+M +A  L+  M 
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286

Query: 532 AKNCVPSEVTFCTLLRGF--VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
            +   P   T+  L+ G+  V+   K+K V     + A+  V  D+   S ++  LSK K
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVF---NIMAQMGVTCDVHSYSVMISGLSKMK 343

Query: 590 KYRECLNQFRHL 601
              E ++ F  +
Sbjct: 344 MLDEAMDLFEGM 355



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 125/226 (55%), Gaps = 3/226 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A   F+ M +M  +  + S++++++ L+K K  D  + LF+ + +  + PD+   + 
Sbjct: 310 AGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSS 369

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+ LCK G  + A   +  +      PN +T+  LI+ LC   ++ +A  L KK+    
Sbjct: 370 LIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQG 429

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              N+ T+N L++GLC+      A K+F++++ +   +   DVVTY+ +I+GLCK+   D
Sbjct: 430 IQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNV---DVVTYSIMINGLCKESLFD 486

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           +A  LL +M+D+   P+ I Y ++I  F   D   +A+ L  EM+D
Sbjct: 487 EALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 2/172 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + +  ++   KSG I  N A+ + D M      P + ++T L+  L K+ Q D  ++
Sbjct: 363 DVVAYSSLIDGLCKSGRI--NSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIA 420

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L K++   G+  +++  N+L++ LCK G  + A  V   +L      + VT++ +INGLC
Sbjct: 421 LLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLC 480

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
            E    EA  L  K+    C P+ + + T+IN          A KL  EM++
Sbjct: 481 KESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 4/204 (1%)

Query: 398 SVITYNTLL---SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           S+I  +TLL   +    + NL DA+   ++M      P    F   +  L K       +
Sbjct: 10  SIIPNSTLLLSHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVI 69

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +FQ +     +    T N LIN  C + ++ +A  +F ++   G  PD++T +T+I  L
Sbjct: 70  HLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGL 129

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C  GQ+ ++ +    + ++      V++ TL+ G  +  +    + LL K+  E +   D
Sbjct: 130 CLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGE-ICRPD 188

Query: 575 LSLSSKVVDLLSKDKKYRECLNQF 598
           + + + ++D L KDK  R+  + +
Sbjct: 189 VVMYNTIIDGLCKDKLVRDAFDLY 212


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  361 bits (926), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 208/584 (35%), Positives = 320/584 (54%), Gaps = 46/584 (7%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I +++A+  F  MI  +P P +  F+ L + +AK KQYD V++L K++   
Sbjct: 156 ERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK 215

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  +L+ L+++INC C+      AF  +G+I++  + PNT+TF+ LINGLC EGR+ EA
Sbjct: 216 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 275

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS- 229
             L  ++      P+++T NTL+NGLC +     A+ L ++MV E+G  C+P+ VTY   
Sbjct: 276 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-EYG--CQPNAVTYGPV 332

Query: 230 ----------------------------------IIDGLCKDGFVDKAKELLLQMKDRNI 255
                                             IIDGLCK G +D A  L  +M+ + I
Sbjct: 333 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 392

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
             N+ITYN LI GFC    W +   L  +M+   + P+VVTF+ +I+   K+GK+ +   
Sbjct: 393 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 452

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L + MI RG+ PDT+TY SL+DGFC    + +A ++   MVSKGC  ++ ++NILIN  C
Sbjct: 453 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 512

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K  +++D + L+R+M    +    +TYNTL+ G  ++G L  A +L  +M    V P+  
Sbjct: 513 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 572

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+   +DGLC NG   +A+++F+ I   K EL I  YN +I+G+C   ++  A  LF  L
Sbjct: 573 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 632

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             KG  P V T + MI  LCK+G + +A  L   ME     P   T+  L+R  + +   
Sbjct: 633 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 692

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK-----KYREC 594
           +K V L+ ++      V D S    V+D+LS DK     KY  C
Sbjct: 693 TKSVKLIEELKRCGFSV-DASTIKMVIDMLSDDKANYFSKYHNC 735



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 1/236 (0%)

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           SY   + +   D K +DA+ L+R+M+  R  P+VI ++ L S + +       L L  +M
Sbjct: 153 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 212

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +L  +  + +T +  I+  C+   +  A      I     E    T++ LINGLC  GR+
Sbjct: 213 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 272

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +L  R+   G  PD++T +T+++ LC  G+  +A  L+  M    C P+ VT+  +
Sbjct: 273 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 332

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L    ++ + +  + LL KM  E+ +  D    S ++D L K        N F  +
Sbjct: 333 LNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 212/595 (35%), Positives = 324/595 (54%), Gaps = 40/595 (6%)

Query: 40  HFKDGTSIAKFLNDRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQY 97
           H+   T       +R ++G  +I  N+A+  F+ MI+ +P P    F  L + +A+ KQY
Sbjct: 56  HYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY 115

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D V+   K +  NG+  D++ + ++INC C+      AF VLGR  +  + P+T+TF+ L
Sbjct: 116 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 175

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           +NG C EGR+ EA  L  ++      P++VT +TLINGLC       AL L + MV E+G
Sbjct: 176 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV-EYG 234

Query: 218 -------------AICK--------------------PDVVTYNSIIDGLCKDGFVDKAK 244
                         +CK                      VV Y+ +ID LCKDG  D A 
Sbjct: 235 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 294

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            L  +M+ + I  +V+TY+SLI G C    W +   +  EM+   + PDVVTF+A+I+  
Sbjct: 295 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 354

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K+GK+ +   L   MI RG+ PDT+TYNSL+DGFC    +  A ++F  MVSKGC  D+
Sbjct: 355 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 414

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y+ILIN+ CK ++V+D + L+RE+ S+ + P+ ITYNTL+ G  Q G L  A +L  +
Sbjct: 415 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 474

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    V P   T+   +DGLC NG + +A+++F+ ++  +  L I  YN +I+G+C   +
Sbjct: 475 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 534

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +  A  LF  L  KG  PDVVT + MI  LCK+G + +A+ L   M+   C P + T+  
Sbjct: 535 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 594

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
           L+R  +  +     V L+ +M       +D S    V+D+LS    DK + + L+
Sbjct: 595 LIRAHLGGSGLISSVELIEEMKVCGF-SADSSTIKMVIDMLSDRRLDKSFLDMLS 648


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 212/595 (35%), Positives = 324/595 (54%), Gaps = 40/595 (6%)

Query: 40  HFKDGTSIAKFLNDRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQY 97
           H+   T       +R ++G  +I  N+A+  F+ MI+ +P P    F  L + +A+ KQY
Sbjct: 27  HYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY 86

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D V+   K +  NG+  D++ + ++INC C+      AF VLGR  +  + P+T+TF+ L
Sbjct: 87  DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 146

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           +NG C EGR+ EA  L  ++      P++VT +TLINGLC       AL L + MV E+G
Sbjct: 147 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV-EYG 205

Query: 218 -------------AICK--------------------PDVVTYNSIIDGLCKDGFVDKAK 244
                         +CK                      VV Y+ +ID LCKDG  D A 
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            L  +M+ + I  +V+TY+SLI G C    W +   +  EM+   + PDVVTF+A+I+  
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K+GK+ +   L   MI RG+ PDT+TYNSL+DGFC    +  A ++F  MVSKGC  D+
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y+ILIN+ CK ++V+D + L+RE+ S+ + P+ ITYNTL+ G  Q G L  A +L  +
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    V P   T+   +DGLC NG + +A+++F+ ++  +  L I  YN +I+G+C   +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +  A  LF  L  KG  PDVVT + MI  LCK+G + +A+ L   M+   C P + T+  
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
           L+R  +  +     V L+ +M       +D S    V+D+LS    DK + + L+
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGF-SADSSTIKMVIDMLSDRRLDKSFLDMLS 619


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 201/519 (38%), Positives = 311/519 (59%), Gaps = 5/519 (0%)

Query: 63  NEAVYFFDCMIKMK-PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++AV  F+ ++ M+ P   +  F  +L+ L K   + T +S  K++    + PDLF  N+
Sbjct: 45  DDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNI 104

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LINC C +G  + AF VL +I +  F P+TVT   LI GLC  G++ EA      +    
Sbjct: 105 LINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKG 164

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              + V++ TLINGLC+T  T  AL++  ++    G + +P+VV YN+IID LCKD  V 
Sbjct: 165 FHLDQVSYGTLINGLCKTGETRAALQVLRKID---GLLVQPNVVMYNTIIDSLCKDKLVI 221

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A +L  +M  + I P+V+TY +LI G   V   KEA  LF +M+   ++PDV TFN ++
Sbjct: 222 HASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILV 281

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK+G+M K   +L +MI++GV+ + VTYNSLMDG+ LV + ++A  +F +M  +G  
Sbjct: 282 DGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVT 341

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            DV SY+I+IN  CK + V++AV L++EM S+ + P+ +TYN+L+ GL + G + DA  L
Sbjct: 342 PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDL 401

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +++M       D  T+++ +D LCKN  V +A+ +   I++   +  I TY  L++GLCK
Sbjct: 402 VNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCK 461

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            GRLK A  ++  L  KG   DV   + M++ LCKEG  D+A  L+  ME   C+P  VT
Sbjct: 462 NGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVT 521

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV-SDLSLSS 579
           + TL+R   +N+K  K V LL +M  +   V S++S +S
Sbjct: 522 YETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISSNS 560



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 180/378 (47%), Gaps = 36/378 (9%)

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           RN    +  +N ++     ++ +  A     +M    +QPD+ TFN +IN  C  G ++ 
Sbjct: 58  RNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNF 117

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              +L  + + G +PDTVT  +L+ G CL G++  A      +++KG   D  SY  LIN
Sbjct: 118 AFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLIN 177

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             CK  +   A+ + R++    ++P+V+ YNT++  L +   +  A  L  +M +  + P
Sbjct: 178 GLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFP 237

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK-- 490
           D  T+ T I G    G + EAV +F  +     +  + T+N L++GLCK G +K A    
Sbjct: 238 DVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVL 297

Query: 491 ---------------------------------LFHRLQHKGPIPDVVTCSTMIHWLCKE 517
                                            +F+ +  +G  PDV + S MI+ LCK 
Sbjct: 298 AVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKT 357

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
             +D+A +L  +M +K+  P+ VT+ +L+ G ++  + S    L+++M   +   +D+  
Sbjct: 358 KMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEM-HNRGQPADVIT 416

Query: 578 SSKVVDLLSKDKKYRECL 595
            S ++D L K+ +  + +
Sbjct: 417 YSSLLDALCKNHQVDKAI 434



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 140/326 (42%), Gaps = 36/326 (11%)

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           D V+    ++  R        +N ++     +     A      M  K  + D++++NIL
Sbjct: 46  DAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNIL 105

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           IN  C    +  A  +  ++      P  +T  TL+ GL   G + +AL   D +     
Sbjct: 106 INCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGF 165

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK--------- 481
             D  ++ T I+GLCK G    A+QV + I     +  +  YN +I+ LCK         
Sbjct: 166 HLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASD 225

Query: 482 --------------------------MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
                                     +GRLK A  LF+++  K   PDV T + ++  LC
Sbjct: 226 LCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLC 285

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           KEG+M KA ++L  M  +    + VT+ +L+ G+    +++K   + + M A + V  D+
Sbjct: 286 KEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTM-ARRGVTPDV 344

Query: 576 SLSSKVVDLLSKDKKYRECLNQFRHL 601
              S +++ L K K   E +N F+ +
Sbjct: 345 QSYSIMINGLCKTKMVDEAVNLFKEM 370


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 192/422 (45%), Positives = 266/422 (63%), Gaps = 24/422 (5%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
            +P+  T N L N LC   R+ E       +      P++VT+NTLI GLCR     VA 
Sbjct: 6   LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVAT 65

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            +                     IIDGLCK G  D+AKE+  +MK + + PNVI+Y+SL+
Sbjct: 66  CI---------------------IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLV 104

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            GFCC    +E+K LF EM+D GVQP++V FN +I+  CK+GK+ +  +LLE+ IQRG+ 
Sbjct: 105 HGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGII 164

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            D VTYNSL+DGFC +G +S AR+LF+SM SKGC H+  SY ILIN  CK  KVE+A+ L
Sbjct: 165 LDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNL 224

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           Y EM     RP+V TY+TLL+GL Q G +GDA KL   M+ + +  DS  +  ++DGLCK
Sbjct: 225 YNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCK 284

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           NG + EA+++F  +++   +L  E+Y+ LI+GLCK G+++ A + F +L  +G  P+VVT
Sbjct: 285 NGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVT 344

Query: 507 CSTMIHWLCKEGQMDKANDL---LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           C+ MIH  C+  Q+DKAN L   +  ME   C P  +T+ TLLRGF ++NK  +VV LLH
Sbjct: 345 CNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLH 404

Query: 564 KM 565
           KM
Sbjct: 405 KM 406



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 210/405 (51%), Gaps = 23/405 (5%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM-- 168
           GL PDLF LN+L NCLC +   S     +  ILR  + P+ VT+N LI GLC   RI   
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 169 ---------------EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
                          EA  +F+++      PNV+++++L++G C       + +LF EMV
Sbjct: 65  TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV 124

Query: 214 NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
           ++     +P++V +N +ID LCK+G V +AK+LL     R I  +++TYNSLI GFC + 
Sbjct: 125 DQG---VQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIG 181

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           D   A+ LF+ M   G + + +++  +IN  CK  K+++   L   M Q G  P+  TY+
Sbjct: 182 DLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYS 241

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +L+ G    G++  A +LF  M + G   D   Y I ++  CK+  + +A+ L+ E+ S 
Sbjct: 242 TLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSY 301

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             +    +Y+ L+ GL + G +  A +   ++    + P+  T    I G C+   V +A
Sbjct: 302 NFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKA 361

Query: 454 VQVFQAIRNCK---CELRIETYNCLINGLCKMGRLKTACKLFHRL 495
             +F+ +   +   C   I TYN L+ G C+  +L+    L H++
Sbjct: 362 NILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 167/338 (49%), Gaps = 7/338 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            +EA   F+ M      P + S++ L+       + +    LF  +   G+ P+L   N+
Sbjct: 78  EDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNV 137

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+ LCK G    A  +L   ++     + VT+N LI+G C  G +  A +LF  +    
Sbjct: 138 LIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKG 197

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C+ N +++  LING C+      A+ L+ EM  + G   +P+V TY++++ GL + G V 
Sbjct: 198 CEHNEISYTILINGYCKIWKVEEAMNLYNEM-PQVGK--RPNVKTYSTLLTGLLQTGKVG 254

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A +L   MK   I+ +   Y   + G C      EA  LF E+     + D  +++ +I
Sbjct: 255 DANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLI 314

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF---VSMVSK 358
           +  CK GK++      + + Q G+ P+ VT N ++ GFC V ++ +A  LF     M   
Sbjct: 315 DGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEEN 374

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           GC  D+ +YN L+   C+  K+E+ V L  +M  +R+R
Sbjct: 375 GCTPDIITYNTLLRGFCESNKLEEVVNLLHKMF-KRMR 411



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 147/302 (48%), Gaps = 7/302 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E+   F+ M+     P +  F +L+ +L K  +      L +     G+  DL   N LI
Sbjct: 115 ESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLI 174

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK+G  S A  +   +       N +++  LING C   ++ EA  L+ ++      
Sbjct: 175 DGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKR 234

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNV T++TL+ GL +T     A KLF  M     ++   D   Y   +DGLCK+G + +A
Sbjct: 235 PNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISV---DSCIYVIFLDGLCKNGVLFEA 291

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            EL  ++K  N   +  +Y+ LI G C     + A   F ++   G+QP+VVT N MI+ 
Sbjct: 292 MELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHG 351

Query: 304 NCKDGKMDKVNRL---LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
            C+  ++DK N L   +E M + G  PD +TYN+L+ GFC   ++     L   M  K  
Sbjct: 352 FCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMF-KRM 410

Query: 361 RH 362
           RH
Sbjct: 411 RH 412



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 156/313 (49%), Gaps = 19/313 (6%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G+ PD+ T N + N  C   ++ +    +  +++RG  PD VTYN+L+ G C V RIS A
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
                      C        I+I+  CK    ++A  ++ EM ++ + P+VI+Y++L+ G
Sbjct: 65  T----------C--------IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 106

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
               G L ++ +L ++M    V P+   F   ID LCK G V+EA ++ +        L 
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILD 166

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + TYN LI+G CK+G L +A KLF  +  KG   + ++ + +I+  CK  ++++A +L  
Sbjct: 167 LVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYN 226

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +M      P+  T+ TLL G +Q  K      L   M A  + V D  +    +D L K+
Sbjct: 227 EMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISV-DSCIYVIFLDGLCKN 285

Query: 589 KKYRECLNQFRHL 601
               E +  F  L
Sbjct: 286 GVLFEAMELFNEL 298


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 190/489 (38%), Positives = 298/489 (60%), Gaps = 10/489 (2%)

Query: 114 PDLFVLNLLINCLCKMGITSG--AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
           PD++ L +LINC C         AF VLG + +    PN VTF+ L+NGL ++ +I++A 
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
           +LF ++     +P+V+T++T+INGLC+  +T +A++L ++M  E G  CKP+VV Y++II
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM-EEKG--CKPNVVVYSTII 124

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           D LCKD  + +A E L +M +R I+PNV+TY+S++ GFC +    EA  LF +M++  V 
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PD VTFN +++   K+G + +   + E MI++GV P+  TYN+LMDG+C   ++  A++L
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  MV KGC   V SYNILI  +CK  ++++A  L  EM  + + P  +TY+TL+ G  Q
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G   DA KL+++M+   ++PD  T++  +DGLCK G + EA ++ +A++  K E  I  
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFI 364

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y  LI G+C  G+L+ A +LF  L  KG  PDVVT + MI  L K G  ++A +L  DM 
Sbjct: 365 YTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMA 424

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
              C+P+  T+  +++GF++N   S    L+     E++V    S  S    +LS  +  
Sbjct: 425 VHGCLPNSCTYNVIIQGFLRNGDTSNAGRLI-----EEMVGRGFSADSSTFQMLSDLESR 479

Query: 592 RECLNQFRH 600
            E ++ F H
Sbjct: 480 DEIISLFMH 488



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/435 (32%), Positives = 227/435 (52%), Gaps = 3/435 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K+   P   +F+ LL  L+   +    V LF  +   G  PD+   + +IN LCKMG 
Sbjct: 38  MFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGS 97

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T+ A  +L ++      PN V ++ +I+ LC +  I EA     ++      PNVVT+++
Sbjct: 98  TTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSS 157

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +++G C    +  A  LF++MV        PD VT+N ++DGL K+G + +A+ +   M 
Sbjct: 158 ILHGFCNLGRSNEATSLFKQMVERN---VMPDTVTFNILVDGLSKEGMILEAQCVFETMI 214

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           ++ + PNV TYN+L+ G+C      EA+ LF  M+  G  P V ++N +I  +CK G++D
Sbjct: 215 EKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRID 274

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL  M  + + PDTVTY++LM GFC  GR   A++L   M S G   D+ +Y+I++
Sbjct: 275 EAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVL 334

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CK   +++A  L + M   +I P++  Y  L+ G+   G L  A +L   + +  + 
Sbjct: 335 DGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQ 394

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD  T+   I GL K G   EA ++F+ +    C     TYN +I G  + G    A +L
Sbjct: 395 PDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRL 454

Query: 492 FHRLQHKGPIPDVVT 506
              +  +G   D  T
Sbjct: 455 IEEMVGRGFSADSST 469



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 208/385 (54%), Gaps = 3/385 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  FD M+KM   P + +++ ++  L K       + L K++   G  P++ V + +I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK  + + A   L  ++    +PN VT++ +++G C  GR  EA  LFK++      
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VTFN L++GL +    L A  +FE M+ E G   +P+V TYN+++DG C    +D+A
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMI-EKGV--EPNVNTYNALMDGYCSQSQMDEA 241

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           ++L   M  +   P+V +YN LI G C      EAK L  EM    + PD VT++ ++  
Sbjct: 242 QKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKG 301

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+DG+     +LLE M   G+ PD +TY+ ++DG C  G +  A EL  +M       +
Sbjct: 302 FCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPN 361

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           ++ Y ILI   C   K+E A  L+  +  + I+P V+TY  ++SGL + G   +A +L  
Sbjct: 362 IFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFR 421

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNG 448
            M ++  +P+S T+   I G  +NG
Sbjct: 422 DMAVHGCLPNSCTYNVIIQGFLRNG 446



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 162/317 (51%), Gaps = 3/317 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           SNEA   F  M++    P   +F IL+  L+K         +F+ +   G+ P++   N 
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++  C       A  +   ++R    P+  ++N LI G C  GRI EA  L  +++  A
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ VT++TL+ G C+      A KL EEM   +G +  PD++TY+ ++DGLCK G +D
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM-RSYGLL--PDLMTYSIVLDGLCKQGHLD 344

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A ELL  M++  I PN+  Y  LI G C     + A+ LF  +   G+QPDVVT+  MI
Sbjct: 345 EAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMI 404

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K G  ++   L   M   G  P++ TYN ++ GF   G  S A  L   MV +G  
Sbjct: 405 SGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFS 464

Query: 362 HDVYSYNILINANCKDQ 378
            D  ++ +L +   +D+
Sbjct: 465 ADSSTFQMLSDLESRDE 481


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 204/574 (35%), Positives = 321/574 (55%), Gaps = 41/574 (7%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R ++G  +I  NEA+  F+ MI+ +P P +  F+ L + +A+ K+YD V+   K ++ N
Sbjct: 39  ERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLN 98

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  +++ +N++INC C+      AF V+GR L+  F PNT+TF+ LING C EGR+ EA
Sbjct: 99  GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEA 158

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLC--------------------------------- 197
             L  ++      PNVVT NTLINGLC                                 
Sbjct: 159 VALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNR 218

Query: 198 --RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
             ++ NT +AL LF +M  E  +I K  VV Y+ +ID LCKDG +D A  L  +M+ + I
Sbjct: 219 MCKSGNTALALDLFRKM--EERSI-KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGI 275

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
             +V+ Y+S+I G C    W +   +  EM+   + P+VVTF+A+I+   K+GK+ +   
Sbjct: 276 KADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKE 335

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L   M+ RG+ PDT+TY+SL+DGFC   R+  A ++   MVSKGC  ++ +Y+ILIN+ C
Sbjct: 336 LYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYC 395

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K ++V++ + L+ E+ S+ +    +TYNTL+ G  Q G L  A +L  +M    V P   
Sbjct: 396 KAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVV 455

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+   +DGLC NG + +A+++F+ ++  +  L I  YN +I+G+C   ++  A  LF  L
Sbjct: 456 TYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSL 515

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             KG  PDV+T + MI  LCK+G + +A+ L   M+   C PS+ T+  L+R  +  +  
Sbjct: 516 SVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGV 575

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
              V L+ +M       +D S    VV +LS  +
Sbjct: 576 ISSVELIEEMKMRGF-AADASTIKMVVVMLSDGR 608



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 136/330 (41%), Gaps = 59/330 (17%)

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           EAK  + E + NG+                D K+++   L E MIQ    P  + ++ L 
Sbjct: 32  EAKVSYKERLRNGIV---------------DIKVNEAIDLFESMIQSRPLPSLIDFSKL- 75

Query: 337 DGFCLVGRISRARELFVS----MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
             F  V R  +  +L +     M   G  H++Y+ NI+IN  C+ +K+            
Sbjct: 76  --FSAVAR-RKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKL------------ 120

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
                           LF    +G ALK           P++ TF+T I+G C  G V E
Sbjct: 121 ----------------LFAFSVVGRALKF-------GFEPNTITFSTLINGFCLEGRVSE 157

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           AV +   +   K    + T N LINGLC  GR+  A  L  R+   G   + +T   +++
Sbjct: 158 AVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLN 217

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            +CK G    A DL   ME ++   S V +  ++    ++      + L ++M   K + 
Sbjct: 218 RMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEM-KGIK 276

Query: 573 SDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +D+   S ++  L  D ++ +     R ++
Sbjct: 277 ADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 196/509 (38%), Positives = 297/509 (58%), Gaps = 18/509 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++ V  F  M+ + P+P +  F  +L+ L K K Y TV+SLF +L  NG+ P++  L++L
Sbjct: 53  DDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSIL 112

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C +G    AF +  +IL+  + PNT+T   L+ G C   ++ EA      +     
Sbjct: 113 INCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGF 172

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V++ TLINGLC+   T  AL++  ++    G +   DVV Y++IIDGLCKD  V+ 
Sbjct: 173 HFNQVSYGTLINGLCKIGETRAALQMLRQIE---GKLVSTDVVMYSTIIDGLCKDKLVND 229

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL  +M  + I+P V+T NSLI G+C V  +KEA  L  EM+   + PDV TFN +++
Sbjct: 230 AYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVD 289

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+ +    + +M++ GV PD VTY+SLMDG+CLV  +++A+ +           
Sbjct: 290 ALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV----------- 338

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
               Y+I+IN  CK + V+ A+ L+ EM   RI P  +TYN+L+ GL + G +  A +L+
Sbjct: 339 ----YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELV 394

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M+ +    D  T+ + ID LCKN  V +A+ + + I++   +L + TYN LI+GLCK 
Sbjct: 395 DEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQ 454

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GRLK A  +F  L  KG    V T + MI+ LC EG +++A  LL  ME   CVP  VT 
Sbjct: 455 GRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTC 514

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            T++R   +N+K  +   LL +M A  L+
Sbjct: 515 ETIIRALFENDKNERAEKLLREMIARGLL 543



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 36/250 (14%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV-------- 431
           V+D V  +  ML     PSVI +  +LS L ++ +    + L  +++ N +         
Sbjct: 52  VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 111

Query: 432 ---------------------------PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
                                      P++ T  T + G C N  V EA+     +    
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                 +Y  LINGLCK+G  + A ++  +++ K    DVV  ST+I  LCK+  ++ A 
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           +L  +M  K   P+ VT  +L+ G+    +  +   LL +M   K +  D+   + +VD 
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVL-KNINPDVYTFNILVDA 290

Query: 585 LSKDKKYREC 594
           L K+ K +E 
Sbjct: 291 LCKEGKIKEA 300


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 193/509 (37%), Positives = 301/509 (59%), Gaps = 10/509 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F  M++MKP P +  F+ L   +   K Y  VVSLF+ +   G+     +LN++
Sbjct: 44  DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFA 181
            N  C       AF VL   L++    N VTFN L+ GL AE ++ +A  LFKKL     
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163

Query: 182 CDPNVVTFNTLINGLCR---TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
           C+PN V + T++NGL +   T  TL  L++ E+         KPDV TY+ +ID LCKD 
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQ------GNTKPDVRTYSIVIDALCKDI 217

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +D A  LL +MK +NI PN+ TYNSLI G C +  W++ K L  EM++  + P+V TF+
Sbjct: 218 NLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFS 277

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I+  CK+GK++  + ++  MI++GV PD +TY+++MDG+CL G++ RAR +F  +  K
Sbjct: 278 ILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDK 337

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G + +++SY+ILIN  CK + +  A+ L+ E+  + ++P  +TY+T+L GL +VG +GDA
Sbjct: 338 GIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDA 397

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            K+ D+M      PD    +T + G  K G V EA+ +F  +   + +  I  Y  +ING
Sbjct: 398 KKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVING 457

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LCK  R++ A  +F +L   G IPDV T + MI   C+EG  D+   +L  ME   C  +
Sbjct: 458 LCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPAN 517

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            +T+  +++GF ++NK S++V  + +MA 
Sbjct: 518 NITYNVIMQGFFRSNKISEIVSFMKEMAG 546



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 205/427 (48%), Gaps = 39/427 (9%)

Query: 64  EAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +AV  F  +++ K   P    +  ++  L+K    +  +SL + +      PD+   +++
Sbjct: 150 DAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIV 209

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK      A  +L  + +    PN  T+N LI+GLC  G+  +   L  ++     
Sbjct: 210 IDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNI 269

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +PNV TF+ LI+GLC+      A ++   M+ E G   +PD++TY++I+DG C  G VD+
Sbjct: 270 NPNVHTFSILIDGLCKEGKVEDADEVMRHMI-EKGV--EPDIITYSAIMDGYCLRGQVDR 326

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ +   ++D+ I PN+ +Y+ LI G+C   +  +A  LF E+   G++PD VT++ +++
Sbjct: 327 ARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILH 386

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM-------------------------- 336
              + G++    ++ + M++ G  PD   +++L+                          
Sbjct: 387 GLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDT 446

Query: 337 ---------DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
                    +G C   R+  A  +F  + S G   DV +YN++I   C++   ++   + 
Sbjct: 447 NISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGIL 506

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           R+M       + ITYN ++ G F+   + + +  + +M       D+ T    I+ L +N
Sbjct: 507 RKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKEN 566

Query: 448 GFVLEAV 454
             +++ +
Sbjct: 567 PSIVDMI 573



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 173/332 (52%), Gaps = 3/332 (0%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           +I  + A+   + M +    P + ++  L+  L K  Q++ V +L   + +  + P++  
Sbjct: 216 DINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHT 275

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            ++LI+ LCK G    A  V+  ++     P+ +T++ +++G C  G++  A R+F  L 
Sbjct: 276 FSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLR 335

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                PN+ +++ LING C+ +N   A++LF E +++ G   KPD VTY++I+ GL + G
Sbjct: 336 DKGIKPNIFSYSILINGYCKKKNLAKAMQLFGE-ISQKG--LKPDTVTYSTILHGLIEVG 392

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +  AK++  +M      P++  +++L+ G+      +EA  LF ++  N    ++  + 
Sbjct: 393 RIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYT 452

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +IN  CK+ ++ + + + E +   G+ PD  TYN ++ GFC  G     + +   M   
Sbjct: 453 VVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDN 512

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           GC  +  +YN+++    +  K+ + V   +EM
Sbjct: 513 GCPANNITYNVIMQGFFRSNKISEIVSFMKEM 544



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 165/341 (48%), Gaps = 1/341 (0%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D A  L  +M      P+VI ++ L      +  +     LF EM   G+       N 
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SK 358
           + N  C   ++D    +L + ++ G+  + VT+N+L+ G     +++ A  LF  +V  K
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
            C  +   Y  ++N   K    E  + L R M     +P V TY+ ++  L +  NL  A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           + L+++M+  ++ P+ FT+ + IDGLCK G   +   +   + N      + T++ LI+G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LCK G+++ A ++   +  KG  PD++T S ++   C  GQ+D+A  +   +  K   P+
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
             ++  L+ G+ +    +K + L  +++ + L    ++ S+
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYST 383



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 37/259 (14%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ---------LNDV 430
           ++DAV L+  M+  +  PSVI ++ L   +  + +    + L  +M+         + ++
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 431 VPDSF--------------------------TFATYIDGLCKNGFVLEAVQVFQA-IRNC 463
           V +S+                          TF T + GL     V +AV +F+  +R  
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
            CE     Y  ++NGL K G  +    L   ++     PDV T S +I  LCK+  +D A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            +LL +M+ KN  P+  T+ +L+ G  +  +  KV  LL +M     +  ++   S ++D
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLN-INPNVHTFSILID 281

Query: 584 LLSKDKKYRECLNQFRHLL 602
            L K+ K  +     RH++
Sbjct: 282 GLCKEGKVEDADEVMRHMI 300


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 200/572 (34%), Positives = 318/572 (55%), Gaps = 42/572 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F  M+K +P P +  F+ LL+ +AK K++D V+S  +++   G+  +L+  N++
Sbjct: 47  DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INCLC+    S A  +LG++++  + P+ VT N L+NG C   RI EA  L  ++     
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG---- 238
            P+ VTF TL++GL +      A+ L E MV +    C+PD+VTY ++I+GLCK G    
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG---CQPDLVTYGAVINGLCKRGEPDL 223

Query: 239 -------------------------------FVDKAKELLLQMKDRNINPNVITYNSLIC 267
                                           VD A  L  +M ++ I P+V TY+SLI 
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
             C    W +A  L  +M++  + P+VVTFN++I+   K+GK+ +  +L + MIQR ++P
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + VTYNSL++GFC+  R+  A+++F  MVSK C  DV +YN LIN  CK +KV D + L+
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           R+M    +  + +TY TL+ G FQ  +  +A  +  +M  + V P+  T+ T +DGLCKN
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + +A+ VF+ ++  K E  I TYN +  G+CK G+++    LF  L  KG  PDV+  
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +TMI   CK+G  ++A  L + M+    +P   T+ TL+R  +++  K+    L+ +M +
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583

Query: 568 EKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
            +    D S    V D+L     DK + E L+
Sbjct: 584 CRF-AGDASTYGLVTDMLHDGRLDKGFLEVLS 614



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 230/436 (52%), Gaps = 4/436 (0%)

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           ++ EA  LF ++      P++V F+ L++ + + +   + +   E+M  E   +   ++ 
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM--EILGVSH-NLY 101

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TYN +I+ LC+   +  A  +L +M      P+++T NSL+ GFC  +   EA  L  +M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           ++ G QPD VTF  +++   +  K  +   L+E M+ +G  PD VTY ++++G C  G  
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A  L   M       DV  Y+ +I++ CK + V+DA+ L+ EM ++ IRP V TY++L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           +S L   G   DA +L+  M    + P+  TF + ID   K G ++EA ++F  +     
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +  I TYN LING C   RL  A ++F  +  K  +PDVVT +T+I+  CK  ++    +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           L  DM  +  V + VT+ TL+ GF Q +      ++  +M ++  V  ++   + ++D L
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGL 460

Query: 586 SKDKKYRECLNQFRHL 601
            K+ K  + +  F +L
Sbjct: 461 CKNGKLEKAMVVFEYL 476


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  354 bits (909), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 203/574 (35%), Positives = 316/574 (55%), Gaps = 41/574 (7%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I +++A+  F  MI  +P P +  F+ L + +AK KQYD V++L K++   
Sbjct: 58  ERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK 117

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  +L+ L+++INC C+      AF  +G+I++  + PNT+TF+ LINGLC EGR+ EA
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS- 229
             L  ++      P+++T NTL+NGLC +     A+ L ++MV E+G  C+P+ VTY   
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-EYG--CQPNAVTYGPV 234

Query: 230 ----------------------------------IIDGLCKDGFVDKAKELLLQMKDRNI 255
                                             IIDGLCK G +D A  L  +M+ + I
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
             N+ITYN LI GFC    W +   L  +M+   + P+VVTF+ +I+   K+GK+ +   
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L + MI RG+ PDT+TY SL+DGFC    + +A ++   MVSKGC  ++ ++NILIN  C
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K  +++D + L+R+M    +    +TYNTL+ G  ++G L  A +L  +M    V P+  
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+   +DGLC NG   +A+++F+ I   K EL I  YN +I+G+C   ++  A  LF  L
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             KG  P V T + MI  LCK+G + +A  L   ME     P   T+  L+R  + +   
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 594

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           +K V L+ ++      V D S    V+D+LS  +
Sbjct: 595 TKSVKLIEELKRCGFSV-DASTIKMVIDMLSDGR 627



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 1/296 (0%)

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           D K D    L   MI     P  + ++ L        +      L   M  KG  H++Y+
Sbjct: 66  DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
            +I+IN  C+ +K+  A     +++     P+ IT++TL++GL   G + +AL+L+D+M 
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                PD  T  T ++GLC +G   EA+ +   +    C+    TY  ++N +CK G+  
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +L  +++ +    D V  S +I  LCK G +D A +L  +ME K    + +T+  L+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            GF    +      LL  M   K+  + ++ S  ++D   K+ K RE     + ++
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV-LIDSFVKEGKLREAEELHKEMI 360



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 1/236 (0%)

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           SY   + +   D K +DA+ L+R+M+  R  P+VI ++ L S + +       L L  +M
Sbjct: 55  SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +L  +  + +T +  I+  C+   +  A      I     E    T++ LINGLC  GR+
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +L  R+   G  PD++T +T+++ LC  G+  +A  L+  M    C P+ VT+  +
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L    ++ + +  + LL KM  E+ +  D    S ++D L K        N F  +
Sbjct: 235 LNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N A   F  M+  K  P + ++ ILL  L  N + +  + +F+++  + +  D+ + N++
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ +C       A+ +   +      P   T+N +I GLC +G + EA  LF+K+     
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGAICKPDVVTYNSIIDGLCKDGFVD 241
            P+  T+N LI       +   ++KL EE+    F        +  + + DG  K  F+D
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLD 634


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  354 bits (908), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 188/516 (36%), Positives = 306/516 (59%), Gaps = 3/516 (0%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           H++ +   N    F   + +  P P +  F  +L  L K+  Y TVVSL +++  NG+  
Sbjct: 46  HENDDNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITS 105

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           DL +L++LINC  ++G    +F VL +IL+  + PN +T   LI GLC +G+I +A +  
Sbjct: 106 DLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFH 165

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            K+       N V++ TLINGLC+   T  AL+L   +    G + +P+VV YN+IID +
Sbjct: 166 DKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVD---GKLVQPNVVMYNTIIDSM 222

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK   V++A +L  +M  + I+P+V+TYN+LI GFC V   K+A  LF +M+   + P+V
Sbjct: 223 CKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNV 282

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            TFN +++  CK+ ++ +   +L +M+++G+ PD  TYNSLMD +CLV  +++A+ +F +
Sbjct: 283 YTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNT 342

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           +  +G   +++SY+I+I+  CK +KV++A+ L++EM    I P V+TYN+L+ GL ++G 
Sbjct: 343 ISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGK 402

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  ALKL+D+M    V  D  T+ + +D LCKN  V +A+ +   +++   +  I TY  
Sbjct: 403 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTT 462

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L++GLCK GRL+ A  +F  L  KG I DV   + MI   C  G  D++ DLL  ME   
Sbjct: 463 LVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENG 522

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           C+P+ VT+  ++      ++  K   LL +M    L
Sbjct: 523 CIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 170/376 (45%), Gaps = 36/376 (9%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           +  +N  P++  +  ++      + +     L  +M  NG+  D+V  + +IN   + G+
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
                 +L  +++ G  P+ +T  +L+ G CL G+I +A +    +V+ G   +  SY  
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  CK  +   A+ L R +  + ++P+V+ YNT++  + +V  + +A  L  +M    
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + PD  T+   I G C  G + +A  +F  +        + T+N L++G CK  RLK A 
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 490 KLFHRLQHKGPIPDVVT-----------------------------------CSTMIHWL 514
            +   +  +G  PDV T                                    S MIH  
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           CK  ++D+A +L  +M   N +P  VT+ +L+ G  +  K S  + L+ +M  ++ V  D
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEM-HDRGVPHD 421

Query: 575 LSLSSKVVDLLSKDKK 590
               + ++D L K+ +
Sbjct: 422 KITYNSILDALCKNHQ 437


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 192/509 (37%), Positives = 306/509 (60%), Gaps = 3/509 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ M+ M+ +P +  F  +L   AK K Y T VSL  RL   G+ PDL  LN+L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C MG  +  F VL +IL+  + P+TVT N LI GLC +G++ +A     KL     
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V++ TLING+C+  +T  A+KL  ++    G + KP+V  Y++IID LCK   V +
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKID---GRLTKPNVEMYSTIIDALCKYQLVSE 217

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +M  + I+ +V+TY++LI GFC     KEA  L  EM+   + P+V T+N +++
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+ +   +L +M++  V PD +TY++LMDG+ LV  + +A+ +F +M   G   
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV++Y ILIN  CK++ V++A+ L++EM  + + P ++TY++L+ GL + G +     LI
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M+      D  T+++ IDGLCKNG +  A+ +F  +++ +    I T+  L++GLCK 
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GRLK A ++F  L  KG   +V T + MI+  CK+G +++A  +L  ME   C+P+  TF
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            T++    + ++  K   LL +M A  L+
Sbjct: 518 ETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 182/367 (49%), Gaps = 36/367 (9%)

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P +I +N ++  F  +  +  A  L   +   G+QPD++T N +IN  C  G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN---- 372
           L  +++RG  PDTVT N+L+ G CL G++ +A      ++++G + +  SY  LIN    
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 373 -------------------------------ANCKDQKVEDAVCLYREMLSERIRPSVIT 401
                                          A CK Q V +A  L+ EM  + I   V+T
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+TL+ G    G L +A+ L+++M L  + P+ +T+   +D LCK G V EA  V   + 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +  + TY+ L++G   +  +K A  +F+ +   G  PDV T + +I+  CK   +D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A +L  +M  KN VP  VT+ +L+ G  ++ +   V  L+ +M  ++   +D+   S +
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM-RDRGQPADVITYSSL 415

Query: 582 VDLLSKD 588
           +D L K+
Sbjct: 416 IDGLCKN 422



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 36/224 (16%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           Q V+DAV  +  ML  R  P +I +N +L    ++ +   A+ L  +++L  + PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
                                              N LIN  C MG++     +  ++  
Sbjct: 98  -----------------------------------NILINCFCHMGQITFGFSVLAKILK 122

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +G  PD VT +T+I  LC +GQ+ KA      + A+    ++V++ TL+ G  +      
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 182

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            + LL K+   +L   ++ + S ++D L K +   E    F  +
Sbjct: 183 AIKLLRKIDG-RLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 225


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 202/572 (35%), Positives = 325/572 (56%), Gaps = 42/572 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F  M+K +P P +  F+ LL+ +AK  ++D V+SL +++ + G+  + +  ++L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +NC C+      A  VLG++++  + P+ VT + L+NG C   RI EA  L  ++     
Sbjct: 123 LNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGY 182

Query: 183 DPNVVTFNTLI-----------------------------------NGLCRTRNTLVALK 207
            P+ VTFNTLI                                   NGLC+  +  +AL 
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L ++M  E G I + +VV YN+IIDGLCK   +D A +L  +M+ + I P+V TYNSLI 
Sbjct: 243 LLKKM--EKGKI-EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
             C    W +A  L  +M++  + P+VVTFN++I+   K+GK+ +  +L + MIQR ++P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + VTYNSL++GFC+  R+  A+++F  MVSK C  DV +YN LI   CK ++VE+ + L+
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELF 419

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           REM    +  + +TYNTL+ GLFQ G+   A K+  KM  + V PD  T++  +DGLCK 
Sbjct: 420 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 479

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + +A+ VF+ ++  K E  I TYN +I G+CK G+++    LF  L  KG  P+V+  
Sbjct: 480 GKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 539

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +TMI   C++G  ++A+ L  +M+    +P    + TL+R  +++  K+    L+ +M +
Sbjct: 540 TTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRS 599

Query: 568 EKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
               V D S  S V+++L     +K Y E L+
Sbjct: 600 CGF-VGDASTISMVINMLHDGRLEKSYLEMLS 630



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 206/377 (54%), Gaps = 5/377 (1%)

Query: 199 TRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           +RN L  LKL ++ V  FG + K    P ++ ++ ++  + K    D    L  QM++  
Sbjct: 53  SRNGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           I  N  TY+ L+  FC       A  +  +MM  G +PD+VT ++++N  C   ++ +  
Sbjct: 112 IPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 171

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L++ M++ G  PDTVT+N+L+ G  L  + S A  L   MV++GC+ D+++Y  ++N  
Sbjct: 172 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 231

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK   ++ A+ L ++M   +I  +V+ YNT++ GL +  ++ DA  L +KM+   + PD 
Sbjct: 232 CKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 291

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           FT+ + I  LC  G   +A ++   +   K    + T+N LI+   K G+L  A KLF  
Sbjct: 292 FTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 351

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  +   P++VT +++I+  C   ++D+A  +   M +K+C+P  VT+ TL++GF +  +
Sbjct: 352 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411

Query: 555 KSKVVVLLHKMAAEKLV 571
             + + L  +M+   LV
Sbjct: 412 VEEGMELFREMSQRGLV 428


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  353 bits (906), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 198/550 (36%), Positives = 312/550 (56%), Gaps = 13/550 (2%)

Query: 22  FWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGM 81
           F  S  + PNPK  +S       TS+   L+  H+      +  V  F+ ++ + P+P +
Sbjct: 7   FSVSHFQFPNPKFIIS-------TSLYSQLHHHHQD---DEHSLVSSFNRILNINPTPPI 56

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
             F  +L  L K   Y T +SL + +  NG+  DL   N+LINC  ++G T  +F V   
Sbjct: 57  FEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFAN 116

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           IL+  + PN +T   LI GLC +G+I +A     K+       N V + TLINGLC+   
Sbjct: 117 ILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQ 176

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
           T  AL+L   +    G + +P+VV YN+IID +CK   V++A +L  +M  + I+P+V+T
Sbjct: 177 TSAALQLLRRVD---GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y++LI GFC +    +A  LF +M+   + PDV TF+ +++  CK+G++ +   +L +M+
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           ++G+ PD VTY SLMDG+CLV ++++A+ +F +M   G   +V SYNI+IN  CK +KV+
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           +A+ L++EM  + I P V+TYN+L+ GL + G +  ALKL+D+M    V  D  T+ + +
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           D LCKN  V +A+ +   +++   +  + TY  LI+GLCK GRLK A  +F  L  KG  
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYN 473

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
             V T + MI   C     DKA  LL  ME   C+P+  T+  ++    + ++      L
Sbjct: 474 ITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKL 533

Query: 562 LHKMAAEKLV 571
           L +M A  L+
Sbjct: 534 LREMIARGLL 543



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 180/374 (48%), Gaps = 38/374 (10%)

Query: 254 NINPN--VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           NINP   +  +  ++     ++ ++ A  L  EM  NG+  D+VTFN +IN   + G   
Sbjct: 49  NINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTH 108

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               +   ++++G  P+ +T  +L+ G CL G+I +A      +V+ G   +   Y  LI
Sbjct: 109 FSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLI 168

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N  CK  +   A+ L R +  + ++P+V+ YNT++  + +V  + +A  L  +M    + 
Sbjct: 169 NGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGIS 228

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD  T++  I G C  G + +A+ +F  + + +    + T++ L++G CK GR+K A  +
Sbjct: 229 PDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNV 288

Query: 492 FHRLQHKGPIPDVVT-CS----------------------------------TMIHWLCK 516
              +  +G  PDVVT CS                                   MI+  CK
Sbjct: 289 LAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCK 348

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
             ++D+A +L  +M  KN +P  VT+ +L+ G  ++ K S  + L+ +M  ++ V  D  
Sbjct: 349 IKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEM-HDRGVPHDKI 407

Query: 577 LSSKVVDLLSKDKK 590
             + ++D L K+ +
Sbjct: 408 TYNSILDALCKNHQ 421


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 205/607 (33%), Positives = 333/607 (54%), Gaps = 42/607 (6%)

Query: 28  RPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTIL 87
           R  +P   L   +F   +   +    R+   ++  ++AV  F  M++ +P P +  F  L
Sbjct: 27  RKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKL 86

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L+ +AK  ++D V+SL +R+ +  +  DL+  N+LINC C+      A  VLG++++  +
Sbjct: 87  LSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY 146

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+ VT + L+NG C   RI EA  L  ++ V    PN VTFNTLI+GL        A+ 
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL-------------------- 247
           L + MV      C+PD+ TY ++++GLCK G +D A  LL                    
Sbjct: 207 LIDRMVARG---CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263

Query: 248 ---------------LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
                           +M ++ I PNV+TYNSLI   C    W +A  L  +M++  + P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +VVTF+A+I+   K+GK+ +  +L + MI+R ++PD  TY+SL++GFC+  R+  A+ +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M+SK C  +V +YN LI   CK ++VE+ + L+REM    +  + +TYNTL+ GLFQ 
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G+   A K+  KM  + V PD  T++  +DGLCK G + +A+ VF+ ++  K E  I TY
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N +I G+CK G+++    LF  L  KG  P+V+  +TMI   C++G  ++A+ L  +M+ 
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DK 589
              +P+  T+ TL+R  +++  K+    L+ +M +    V D S  S V+++L     +K
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF-VGDASTISMVINMLHDGRLEK 622

Query: 590 KYRECLN 596
            Y E L+
Sbjct: 623 SYLEMLS 629



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 217/442 (49%), Gaps = 41/442 (9%)

Query: 199 TRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           +RN L+ LKL ++ V+ FG + +    P +V +N ++  + K    D    L  +M++  
Sbjct: 52  SRNVLLDLKL-DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           I+ ++ +YN LI  FC       A  +  +MM  G +PD+VT ++++N  C   ++ +  
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L++ M      P+TVT+N+L+ G  L  + S A  L   MV++GC+ D+++Y  ++N  
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230

Query: 375 CKD-----------------------------------QKVEDAVCLYREMLSERIRPSV 399
           CK                                    + V DA+ L+ EM ++ IRP+V
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TYN+L+  L   G   DA +L+  M    + P+  TF+  ID   K G ++EA +++  
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +  I TY+ LING C   RL  A  +F  +  K   P+VVT +T+I   CK  +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +++  +L  +M  +  V + VT+ TL++G  Q         +  KM ++  V  D+   S
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYS 469

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            ++D L K  K  + L  F +L
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYL 491


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 209/581 (35%), Positives = 312/581 (53%), Gaps = 41/581 (7%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I  ++AV  F  M++ +P P +  F  L  +LA+ KQYD V++L K++   
Sbjct: 60  ERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELK 119

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  DL+ LN++INC C+      AF  +G+I +  + PNTVTFN L+NGLC EGR+ EA
Sbjct: 120 GIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEA 179

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGL---------------------------------- 196
             L   + +    P+++T NT++NGL                                  
Sbjct: 180 VELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNR 239

Query: 197 -CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            C++ NT  AL L  +M  E   I KP VVTY  IID LCKDG +D A     +M+ + I
Sbjct: 240 MCKSGNTASALDLLRKM--EHRKI-KPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGI 296

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
             NV TYNSLI  FC    W +   L  +M+   + P+VVTF+A+I+   K+GK+ +   
Sbjct: 297 KANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKD 356

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L   MI RG+ P+T+TYNSL+ G C   R+  A ++   MVSKGC  D+++YNILIN  C
Sbjct: 357 LYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFC 416

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K ++V+D + L+R+M    +    +TY+TL+ G  Q   L  A K+  +M    V P   
Sbjct: 417 KAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIM 476

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+A  +DGLC NG + EA+ +   +  CK EL I  YN +I+G+C   ++  A  LF  L
Sbjct: 477 TYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSL 536

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             KG   D+ + + M+  LCK   + +A+ L   M+     P   T+ TL+R  ++ N  
Sbjct: 537 PSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDI 596

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           +  V L+ +M       SD S    V+D+LS  +  +  LN
Sbjct: 597 TTSVQLIEEMKRCGF-SSDASTVKIVMDMLSSGELDKSFLN 636



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 161/326 (49%), Gaps = 2/326 (0%)

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  LF  M+ +   P V+ FN +     +  + D V  L + M  +G+  D  T N ++
Sbjct: 73  DAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMI 132

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           + FC   ++  A      +   G   +  ++N L+N  C + +V +AV L   M+  +  
Sbjct: 133 NCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV 192

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P +IT NT+++GL     + +A+ LI +M  N   P+ FT+   ++ +CK+G    A+ +
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDL 252

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
            + + + K +  + TY  +I+ LCK GRL  A   F  ++ KG   +V T +++I   C 
Sbjct: 253 LRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS 312

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            G+ D    LL DM  +   P+ VTF  L+   V+  K ++   L ++M    +  + ++
Sbjct: 313 FGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTIT 372

Query: 577 LSSKVVDLLSKDKKYRECLNQFRHLL 602
            +S +  L + DK+  E  NQ   L+
Sbjct: 373 YNSLIYGLCN-DKRLDEA-NQMMDLM 396



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 145/296 (48%), Gaps = 1/296 (0%)

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           D K D    L + M++    P  + +N L        +      L   M  KG  +D+Y+
Sbjct: 68  DIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYT 127

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
            NI+IN  C+ +K+  A     ++      P+ +T+NTLL+GL   G + +A++L+D M 
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
           L+  VPD  T  T ++GLC    V EAV +   +    C+    TY  ++N +CK G   
Sbjct: 188 LSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTA 247

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           +A  L  +++H+   P VVT + +I  LCK+G++D A     +ME K    +  T+ +L+
Sbjct: 248 SALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLI 307

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             F    +      LL  M   K+  + ++ S+ ++D L K+ K  E  + +  ++
Sbjct: 308 GSFCSFGRWDDGAQLLRDMITRKITPNVVTFSA-LIDSLVKEGKLTEAKDLYNEMI 362



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 1/236 (0%)

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           SY   + +   D K +DAV L++ ML  R  P+VI +N L   L +       L L  +M
Sbjct: 57  SYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQM 116

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +L  +  D +T    I+  C+   +  A      I     E    T+N L+NGLC  GR+
Sbjct: 117 ELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRV 176

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +L   +     +PD++T +T+++ LC + ++ +A DL+  M A  C P++ T+  +
Sbjct: 177 FEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPI 236

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L    ++   +  + LL KM   K +   +   + ++D L KD +  + L+ F  +
Sbjct: 237 LNRMCKSGNTASALDLLRKMEHRK-IKPHVVTYTIIIDNLCKDGRLDDALSFFSEM 291


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 187/558 (33%), Positives = 311/558 (55%), Gaps = 44/558 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M++ +P P +  F  L+ ++ + ++ D V+SL++++    +  D++   +L
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I C C       A    G+I +    P+ VTFN L++GLC E R+ EA  LF ++    C
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAI----CK--------- 221
            PNVVTF TL+NGLCR    + A+ L + M+ +        +G I    CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALD 240

Query: 222 ------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                       P+VV Y++IID LCKDG    A+ L  +M+++ I P++ TYNS+I GF
Sbjct: 241 LLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W +A+ L  EM++  + PDVVT+NA+IN   K+GK  +   L + M+ RG+ P+T
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TY+S++DGFC   R+  A  +F  M +KGC  ++ ++N LI+  C  ++++D + L  E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +     TYNTL+ G + VG+L  AL L+ +M  + + PD  T  T +DGLC NG 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 450 VLEAVQVFQAIRNCKCEL-----------RIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +A+++F+ ++  K +L            ++TYN LI+GL   G+   A +L+  + H+
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +T S+MI  LCK+ ++D+A  +   M +K+  P+ VTF TL+ G+ +  +    
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 559 VVLLHKMAAEKLVVSDLS 576
           + L  +M    +V + ++
Sbjct: 601 LELFCEMGRRGIVANAIT 618



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 208/429 (48%), Gaps = 49/429 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ ++  L K+ ++    +LF  +   G+FPDLF  N +I   C  G  S A  +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +L    +P+ VT+N LIN    EG+  EA  L+ ++      PN +T++++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +F  M  +    C P+++T+N++IDG C    +D   ELL +M +  +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMD------------------------------- 287
             TYN+LI GF  V D   A  L  EM+                                
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 288 ---------------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                          NGV+PDV T+N +I+    +GK  +   L E M  RG+ PDT+TY
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           +S++DG C   R+  A ++F SM SK    +V ++  LIN  CK  +V+D + L+ EM  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I  + ITY TL+ G  +VGN+  AL +  +M  + V PD+ T    + GL     +  
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 453 AVQVFQAIR 461
           AV + + ++
Sbjct: 670 AVAMLEKLQ 678



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 184/382 (48%), Gaps = 4/382 (1%)

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L +G    +    A+ LF +M+        P VV +  ++  + +    D    L  +M+
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + I  ++ ++  LI  FC       A   F ++   G+ PDVVTFN +++  C + ++ 
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVS 166

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   L   M +    P+ VT+ +LM+G C  GRI  A  L   M+  G +    +Y  ++
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 372 NANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +  CK      A+ L R+M     I P+V+ Y+ ++  L + G   DA  L  +MQ   +
Sbjct: 227 DGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD FT+ + I G C +G   +A Q+ Q +   K    + TYN LIN   K G+   A +
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L+  +  +G IP+ +T S+MI   CK+ ++D A  +   M  K C P+ +TF TL+ G+ 
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 551 QNNKKSKVVVLLHKMAAEKLVV 572
              +    + LLH+M    LV 
Sbjct: 407 GAKRIDDGMELLHEMTETGLVA 428



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 162/318 (50%), Gaps = 1/318 (0%)

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L  GF  +   ++A  LF +M+ +   P VV F  ++    +  + D V  L + M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           +  D  ++  L+  FC   ++  A   F  +   G   DV ++N L++  C + +V +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ +M     RP+V+T+ TL++GL + G + +A+ L+D+M  + + P   T+ T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKNGFVLEAVQVFQAIRNCKCEL-RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           CK G  + A+ + + +      +  +  Y+ +I+ LCK GR   A  LF  +Q KG  PD
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           + T ++MI   C  G+   A  LL +M  +   P  VT+  L+  FV+  K  +   L  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 564 KMAAEKLVVSDLSLSSKV 581
           +M    ++ + ++ SS +
Sbjct: 350 EMLPRGIIPNTITYSSMI 367



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 113/224 (50%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + +EDA+ L+ +ML  R  PSV+ +  L+  + ++      + L  KM+   +  D ++F
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I   C    +  A+  F  I        + T+N L++GLC   R+  A  LFH++  
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
               P+VVT +T+++ LC+EG++ +A  LL  M      P+++T+ T++ G  +      
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVS 237

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            + LL KM     ++ ++ + S ++D L KD ++ +  N F  +
Sbjct: 238 ALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 129/304 (42%), Gaps = 37/304 (12%)

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L  GF  +  +  A +LF  M+       V  +  L+    + ++ +  + LY++M  ++
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           IR  + ++  L+        L  AL    K+    + PD  TF T + GLC    V EA+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG--P------------ 500
            +F  +    C   + T+  L+NGLC+ GR+  A  L  R+   G  P            
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 501 ----------------------IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
                                 IP+VV  S +I  LCK+G+   A +L  +M+ K   P 
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             T+ +++ GF  + + S    LL +M  E+ +  D+   + +++   K+ K+ E    +
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 599 RHLL 602
             +L
Sbjct: 349 DEML 352



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 54/117 (46%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M     SP + +FT L+    K  + D  + LF  +   G+  +      L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           I    K+G  +GA  +   ++ S   P+T+T   ++ GL ++  +  A  + +KL +
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 205/607 (33%), Positives = 333/607 (54%), Gaps = 42/607 (6%)

Query: 28  RPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTIL 87
           R  +P   L   +F   +   +    R+   ++  ++AV  F  M++ +P P +  F  L
Sbjct: 11  RKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKL 70

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L+ +AK  ++D V+SL +R+ +  +  DL+  N+LINC C+      A  VLG++++  +
Sbjct: 71  LSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY 130

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+ VT + L+NG C   RI EA  L  ++ V    PN VTFNTLI+GL        A+ 
Sbjct: 131 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 190

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL-------------------- 247
           L + MV      C+PD+ TY ++++GLCK G +D A  LL                    
Sbjct: 191 LIDRMVARG---CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 247

Query: 248 ---------------LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
                           +M ++ I PNV+TYNSLI   C    W +A  L  +M++  + P
Sbjct: 248 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 307

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +VVTF+A+I+   K+GK+ +  +L + MI+R ++PD  TY+SL++GFC+  R+  A+ +F
Sbjct: 308 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 367

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M+SK C  +V +YN LI   CK ++VE+ + L+REM    +  + +TYNTL+ GLFQ 
Sbjct: 368 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 427

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G+   A K+  KM  + V PD  T++  +DGLCK G + +A+ VF+ ++  K E  I TY
Sbjct: 428 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 487

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N +I G+CK G+++    LF  L  KG  P+V+  +TMI   C++G  ++A+ L  +M+ 
Sbjct: 488 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 547

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DK 589
              +P+  T+ TL+R  +++  K+    L+ +M +    V D S  S V+++L     +K
Sbjct: 548 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF-VGDASTISMVINMLHDGRLEK 606

Query: 590 KYRECLN 596
            Y E L+
Sbjct: 607 SYLEMLS 613



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 217/442 (49%), Gaps = 41/442 (9%)

Query: 199 TRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           +RN L+ LKL ++ V+ FG + +    P +V +N ++  + K    D    L  +M++  
Sbjct: 36  SRNVLLDLKL-DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 94

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           I+ ++ +YN LI  FC       A  +  +MM  G +PD+VT ++++N  C   ++ +  
Sbjct: 95  ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 154

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L++ M      P+TVT+N+L+ G  L  + S A  L   MV++GC+ D+++Y  ++N  
Sbjct: 155 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 214

Query: 375 CKD-----------------------------------QKVEDAVCLYREMLSERIRPSV 399
           CK                                    + V DA+ L+ EM ++ IRP+V
Sbjct: 215 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 274

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TYN+L+  L   G   DA +L+  M    + P+  TF+  ID   K G ++EA +++  
Sbjct: 275 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 334

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +  I TY+ LING C   RL  A  +F  +  K   P+VVT +T+I   CK  +
Sbjct: 335 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +++  +L  +M  +  V + VT+ TL++G  Q         +  KM ++  V  D+   S
Sbjct: 395 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYS 453

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            ++D L K  K  + L  F +L
Sbjct: 454 ILLDGLCKYGKLEKALVVFEYL 475


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  352 bits (902), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 187/558 (33%), Positives = 311/558 (55%), Gaps = 44/558 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M++ +P P +  F  L+ ++ + ++ D V+SL++++    +  D++   +L
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I C C       A    G+I +    P+ VTFN L++GLC E R+ EA  LF ++    C
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAI----CK--------- 221
            PNVVTF TL+NGLCR    + A+ L + M+ +        +G I    CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 222 ------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                       P+VV Y++IID LCKDG    A+ L  +M+++ I P++ TYNS+I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W +A+ L  EM++  + PDVVT+NA+IN   K+GK  +   L + M+ RG+ P+T
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TY+S++DGFC   R+  A  +F  M +KGC  ++ ++N LI+  C  ++++D + L  E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +     TYNTL+ G + VG+L  AL L+ +M  + + PD  T  T +DGLC NG 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 450 VLEAVQVFQAIRNCKCEL-----------RIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +A+++F+ ++  K +L            ++TYN LI+GL   G+   A +L+  + H+
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +T S+MI  LCK+ ++D+A  +   M +K+  P+ VTF TL+ G+ +  +    
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 559 VVLLHKMAAEKLVVSDLS 576
           + L  +M    +V + ++
Sbjct: 601 LELFCEMGRRGIVANAIT 618



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 208/429 (48%), Gaps = 49/429 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ ++  L K+ ++    +LF  +   G+FPDLF  N +I   C  G  S A  +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +L    +P+ VT+N LIN    EG+  EA  L+ ++      PN +T++++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +F  M  +    C P+++T+N++IDG C    +D   ELL +M +  +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMD------------------------------- 287
             TYN+LI GF  V D   A  L  EM+                                
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 288 ---------------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                          NGV+PDV T+N +I+    +GK  +   L E M  RG+ PDT+TY
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           +S++DG C   R+  A ++F SM SK    +V ++  LIN  CK  +V+D + L+ EM  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I  + ITY TL+ G  +VGN+  AL +  +M  + V PD+ T    + GL     +  
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 453 AVQVFQAIR 461
           AV + + ++
Sbjct: 670 AVAMLEKLQ 678



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 184/382 (48%), Gaps = 4/382 (1%)

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L +G    +    A+ LF +M+        P VV +  ++  + +    D    L  +M+
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + I  ++ ++  LI  FC       A   F ++   G+ PDVVTFN +++  C + ++ 
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVS 166

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   L   M +    P+ VT+ +LM+G C  GRI  A  L   M+  G +    +Y  ++
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 372 NANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +  CK      A+ L R+M     I P+V+ Y+ ++  L + G   DA  L  +MQ   +
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD FT+ + I G C +G   +A Q+ Q +   K    + TYN LIN   K G+   A +
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L+  +  +G IP+ +T S+MI   CK+ ++D A  +   M  K C P+ +TF TL+ G+ 
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 551 QNNKKSKVVVLLHKMAAEKLVV 572
              +    + LLH+M    LV 
Sbjct: 407 GAKRIDDGMELLHEMTETGLVA 428



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 162/318 (50%), Gaps = 1/318 (0%)

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L  GF  +   ++A  LF +M+ +   P VV F  ++    +  + D V  L + M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           +  D  ++  L+  FC   ++  A   F  +   G   DV ++N L++  C + +V +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ +M     RP+V+T+ TL++GL + G + +A+ L+D+M  + + P   T+ T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKNGFVLEAVQVFQAIRNCKCEL-RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           CK G  + A+ + + +      +  +  Y+ +I+ LCK GR   A  LF  +Q KG  PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           + T ++MI   C  G+   A  LL +M  +   P  VT+  L+  FV+  K  +   L  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 564 KMAAEKLVVSDLSLSSKV 581
           +M    ++ + ++ SS +
Sbjct: 350 EMLPRGIIPNTITYSSMI 367



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 113/224 (50%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + +EDA+ L+ +ML  R  PSV+ +  L+  + ++      + L  KM+   +  D ++F
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I   C    +  A+  F  I        + T+N L++GLC   R+  A  LFH++  
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
               P+VVT +T+++ LC+EG++ +A  LL  M      P+++T+ T++ G  +      
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            + LL KM     ++ ++ + S ++D L KD ++ +  N F  +
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 129/304 (42%), Gaps = 37/304 (12%)

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L  GF  +  +  A +LF  M+       V  +  L+    + ++ +  + LY++M  ++
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           IR  + ++  L+        L  AL    K+    + PD  TF T + GLC    V EA+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG--P------------ 500
            +F  +    C   + T+  L+NGLC+ GR+  A  L  R+   G  P            
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 501 ----------------------IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
                                 IP+VV  S +I  LCK+G+   A +L  +M+ K   P 
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             T+ +++ GF  + + S    LL +M  E+ +  D+   + +++   K+ K+ E    +
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 599 RHLL 602
             +L
Sbjct: 349 DEML 352



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 54/117 (46%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M     SP + +FT L+    K  + D  + LF  +   G+  +      L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           I    K+G  +GA  +   ++ S   P+T+T   ++ GL ++  +  A  + +KL +
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  352 bits (902), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 187/558 (33%), Positives = 311/558 (55%), Gaps = 44/558 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M++ +P P +  F  L+ ++ + ++ D V+SL++++    +  D++  N+L
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I C C       A    G+I +    P+ VTF  L++GLC E R+ EA  LF ++    C
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAI----CK--------- 221
            PNVVTF TL+NGLCR    + A+ L + M+ +        +G I    CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 222 ------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                       P+VV Y++IID LCKDG    A+ L  +M+++ I P++ TYNS+I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W +A+ L  EM++  + PDVVT+NA+IN   K+GK  +   L + M+ RG+ P+T
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TY+S++DGFC   R+  A  +F  M +KGC  ++ ++N LI+  C  ++++D + L  E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +     TYNTL+ G + VG+L  AL L+ +M  + + PD  T  T +DGLC NG 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 450 VLEAVQVFQAIRNCKCEL-----------RIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +A+++F+ ++  K +L            ++TYN LI+GL   G+   A +L+  + H+
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +T S+MI  LCK+ ++D+A  +   M +K+  P+ VTF TL+ G+ +  +    
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 559 VVLLHKMAAEKLVVSDLS 576
           + L  +M    +V + ++
Sbjct: 601 LELFCEMGRRGIVANAIT 618



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 208/429 (48%), Gaps = 49/429 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ ++  L K+ ++    +LF  +   G+FPDLF  N +I   C  G  S A  +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +L    +P+ VT+N LIN    EG+  EA  L+ ++      PN +T++++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +F  M  +    C P+++T+N++IDG C    +D   ELL +M +  +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMD------------------------------- 287
             TYN+LI GF  V D   A  L  EM+                                
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 288 ---------------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                          NGV+PDV T+N +I+    +GK  +   L E M  RG+ PDT+TY
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           +S++DG C   R+  A ++F SM SK    +V ++  LIN  CK  +V+D + L+ EM  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I  + ITY TL+ G  +VGN+  AL +  +M  + V PD+ T    + GL     +  
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 453 AVQVFQAIR 461
           AV + + ++
Sbjct: 670 AVAMLEKLQ 678



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 184/382 (48%), Gaps = 4/382 (1%)

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L +G    +    A+ LF +M+        P VV +  ++  + +    D    L  +M+
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + I  ++ ++N LI  FC       A   F ++   G+ PDVVTF  +++  C + ++ 
Sbjct: 107 RKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVS 166

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   L   M +    P+ VT+ +LM+G C  GRI  A  L   M+  G +    +Y  ++
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 372 NANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +  CK      A+ L R+M     I P+V+ Y+ ++  L + G   DA  L  +MQ   +
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD FT+ + I G C +G   +A Q+ Q +   K    + TYN LIN   K G+   A +
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L+  +  +G IP+ +T S+MI   CK+ ++D A  +   M  K C P+ +TF TL+ G+ 
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 551 QNNKKSKVVVLLHKMAAEKLVV 572
              +    + LLH+M    LV 
Sbjct: 407 GAKRIDDGMELLHEMTETGLVA 428



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 162/318 (50%), Gaps = 1/318 (0%)

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L  GF  +   ++A  LF +M+ +   P VV F  ++    +  + D V  L + M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           +  D  ++N L+  FC   ++  A   F  +   G   DV ++  L++  C + +V +A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ +M     RP+V+T+ TL++GL + G + +A+ L+D+M  + + P   T+ T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKNGFVLEAVQVFQAIRNCKCEL-RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           CK G  + A+ + + +      +  +  Y+ +I+ LCK GR   A  LF  +Q KG  PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           + T ++MI   C  G+   A  LL +M  +   P  VT+  L+  FV+  K  +   L  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 564 KMAAEKLVVSDLSLSSKV 581
           +M    ++ + ++ SS +
Sbjct: 350 EMLPRGIIPNTITYSSMI 367



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 112/224 (50%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + +EDA+ L+ +ML  R  PSV+ +  L+  + ++      + L  KM+   +  D ++F
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I   C    +  A+  F  I        + T+  L++GLC   R+  A  LFH++  
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
               P+VVT +T+++ LC+EG++ +A  LL  M      P+++T+ T++ G  +      
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            + LL KM     ++ ++ + S ++D L KD ++ +  N F  +
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 37/304 (12%)

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L  GF  +  +  A +LF  M+       V  +  L+    + ++ +  + LY++M  ++
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           IR  + ++N L+        L  AL    K+    + PD  TF T + GLC    V EA+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG--P------------ 500
            +F  +    C   + T+  L+NGLC+ GR+  A  L  R+   G  P            
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 501 ----------------------IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
                                 IP+VV  S +I  LCK+G+   A +L  +M+ K   P 
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             T+ +++ GF  + + S    LL +M  E+ +  D+   + +++   K+ K+ E    +
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 599 RHLL 602
             +L
Sbjct: 349 DEML 352



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 54/117 (46%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M     SP + +FT L+    K  + D  + LF  +   G+  +      L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           I    K+G  +GA  +   ++ S   P+T+T   ++ GL ++  +  A  + +KL +
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  352 bits (902), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 206/604 (34%), Positives = 332/604 (54%), Gaps = 36/604 (5%)

Query: 28  RPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTIL 87
           R  +P   L   +F   +   +    R+   N+  ++A+  F  M++ +P P +  F  L
Sbjct: 27  RKASPLFSLRGVYFSAASYDYREKLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKL 86

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L+ +AK K++D V+SL +R+ +  +  DL+  N+LINC C+      A  VLG++++  +
Sbjct: 87  LSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY 146

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+ VT + L+NG C   RI +A  L  ++      P+ VTFNTLI+GL        A+ 
Sbjct: 147 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVA 206

Query: 208 LFEEMVNE--------FGAI----CK--------------------PDVVTYNSIIDGLC 235
           L ++MV          +GA+    CK                     DVV YN+IIDGLC
Sbjct: 207 LVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 266

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   +D A  L  +M+ + I P+V TYNSLI   C    W +A  L   M++  + P+VV
Sbjct: 267 KYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVV 326

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           TF+A+I+   K+GK+ +  +L + MI+R ++PD  TY+SL++GFC+  R+  A+ +F  M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +SK C  +V +YN LI   CK ++VE+ + L+REM    +  + +TYNTL+ GLFQ G+ 
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             A K+  KM  + V PD  T++  +DGLCK G + +A+ VF+ ++  K E  I TYN +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I G+CK G+++    LF  L  KG  P+V+  +TMI   C++G  ++A+ L  +M+    
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYR 592
           +P    + TL+R  +++  K+    L+ +M +    V D S  S V+++L     +K Y 
Sbjct: 567 LPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGF-VGDASTISMVINMLHDGRLEKSYL 625

Query: 593 ECLN 596
           E L+
Sbjct: 626 EMLS 629


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  352 bits (902), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 207/573 (36%), Positives = 313/573 (54%), Gaps = 12/573 (2%)

Query: 23  WCSFGRPPNPKTDLSSHHFKDG---TSIAKFLNDRHKSGNITSNEA-VYFFDCMIKMKPS 78
           W      P+  +  +S HF+     T+ A+FL+      ++ S EA + FF  M+ M P 
Sbjct: 12  WFPLLLLPHFGSLSNSTHFRSSSNFTNRAQFLDSMR---DLKSEEAALSFFHKMVVMNPL 68

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    FT L  ++ K K Y T +SL K + S G+ PD++ L ++INCLC +  T   F V
Sbjct: 69  PREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSV 128

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           LG + +    P  VTF  LINGLCAEG +  AAR    L       N  T+  +INGLC+
Sbjct: 129 LGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCK 188

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVV-TYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
             +T  A+   E++    G  C  DVV  Y++I+D LCKDG V +A  L   M  + I P
Sbjct: 189 AGDTSGAILYLEKIK---GRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQP 245

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +++ YNSLI G C    WKEA  L   MM  G+ P+V TFN +++  CKDG + +   ++
Sbjct: 246 DLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIM 305

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M+  GV PD VTYNS++ G CL+ ++  A ++F  M+ KG   ++ +Y+ LI+  CK 
Sbjct: 306 GFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKT 365

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + +  A+ L  EM++  + P V+T++TL+ G  + G    A +L   M  +D  P+  T 
Sbjct: 366 KNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTC 425

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           A  +DGL K  F  EA+ +F+ +     EL +  YN +++G+C  G+L  A +LF  L  
Sbjct: 426 AIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPS 485

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           KG   DVV  +TMI  LCKEG +D A +LL+ ME   C+P+E T+   +RG +Q    S+
Sbjct: 486 KGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISR 545

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
               L  M  + L  +D + +  ++   S +K+
Sbjct: 546 STKYLLLMKGKGL-SADATTTELLISYFSANKE 577



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 72/181 (39%)

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           AL    KM + + +P    F      + K       + + + I +   +  + T   +IN
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIIN 114

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
            LC +        +   +   G  P VVT +T+I+ LC EG + +A      +E      
Sbjct: 115 CLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQS 174

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
           +  T+  ++ G  +    S  ++ L K+      +  +   S ++D L KD    E LN 
Sbjct: 175 NSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNL 234

Query: 598 F 598
           F
Sbjct: 235 F 235


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 190/517 (36%), Positives = 302/517 (58%), Gaps = 5/517 (0%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK--NKQYDTVVSLFKRLNSNGLFPDL 116
           NI  +  V  F+ +++ KP+  +  F  +L  L K  N  Y T +SL +RL  +G+ PD+
Sbjct: 44  NIDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDI 103

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           F  N+LINC C M   + AF ++ +IL+  + P+T+TFN LI GLC  G++ EA      
Sbjct: 104 FTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDH 163

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +       +  ++ TLINGLC+   T  AL++  ++    G + K +VV YN+IID LCK
Sbjct: 164 VLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKID---GKLVKINVVMYNTIIDSLCK 220

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              V  A EL  QM  + I+P+V+T+++LI GFC V   +EA  LF EM+   + PD  T
Sbjct: 221 HKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYT 280

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           FN +++  CK+G +     +L +M++ GV P+ VTY+SLMDG+CLV ++++A+ +  ++ 
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTIS 340

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G   + +SY  +IN  CK + V++A+ L+ +M  + I P  +TYN+L+ GL + G + 
Sbjct: 341 QMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRIS 400

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A +L+D+M  N    + FT+   ID LCKN  V +A+ + + I++   +  + T+N LI
Sbjct: 401 YAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILI 460

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            GLCK+GRLK A  +F  L  KG   +  T + M++ LCKEG  D+A  LL  M+    +
Sbjct: 461 YGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGII 520

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           P  VT+ TL++     ++  K   LL +M A  +V +
Sbjct: 521 PDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYA 557


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  351 bits (901), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 190/554 (34%), Positives = 308/554 (55%), Gaps = 44/554 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M++ +P P +  F  L+ ++ + ++ D V+SL++++    +  D++  N+L
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I C C       A    G+I +    P+ VTF  L++GLC E R+ EA   F ++    C
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAI----CK--------- 221
            PNVVTF TL+NGLCR    + A+ L + M+ +        +G I    CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 222 ------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                       P+VV Y++IID LCKDG    A+ L  +M+++ I P++ TYNS+I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W +A+ L  EM++  + PDVVT+NA+IN   K+GK  +   L + M+ RG+ P+T
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 360

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TYNS++DGFC   R+  A ++F  M +KGC  DV+++  LI+  C  ++++D + L  E
Sbjct: 361 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 420

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +  + +TYNTL+ G   VG+L  AL L  +M  + V PD  T  T +DGLC NG 
Sbjct: 421 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 480

Query: 450 VLEAVQVFQAIRNCKCEL-----------RIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +A+++F+A++  K +L            + TYN LI GL   G+   A +L+  + H+
Sbjct: 481 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 540

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +T S+MI  LCK+ ++D+A  + + M +K+  P+ VTF TL+ G+ +  +    
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 600

Query: 559 VVLLHKMAAEKLVV 572
           + L  +M    +V 
Sbjct: 601 LELFCEMGRRGIVA 614



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 168/515 (32%), Positives = 275/515 (53%), Gaps = 15/515 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+ FF  M +    P + +FT L+  L +  +    V+L  R+  +GL P       +
Sbjct: 166 SEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225

Query: 123 INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++ +CK G T  A  +L ++   S   PN V ++ +I+ LC +GR  +A  LF ++    
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P++ T+N++I G C +     A +L +EM+        PDVVTYN++I+   K+G   
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER---KISPDVVTYNALINAFVKEGKFF 342

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A EL  +M  R I PN ITYNS+I GFC  D    A+ +F  M   G  PDV TF  +I
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 402

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C   ++D    LL  M +RG+  +TVTYN+L+ GFCLVG ++ A +L   M+S G  
Sbjct: 403 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 462

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSER-----------IRPSVITYNTLLSGLF 410
            D+ + N L++  C + K++DA+ +++ M   +           + P V+TYN L+ GL 
Sbjct: 463 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 522

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
             G   +A +L ++M    +VPD+ T+++ IDGLCK   + EA Q+F ++ +      + 
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 582

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           T+N LING CK GR+    +LF  +  +G + D +   T+I+   K G ++ A D+  +M
Sbjct: 583 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 642

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +    P  +T   +L GF    +  + V +L  +
Sbjct: 643 ISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 208/429 (48%), Gaps = 49/429 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ ++  L K+ ++    +LF  +   G+FPDLF  N +I   C  G  S A  +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +L    +P+ VT+N LIN    EG+  EAA L+ ++      PN +T+N++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +F  M  +    C PDV T+ ++IDG C    +D   ELL +M  R +  N
Sbjct: 373 QDRLDAAEDMFYLMATKG---CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 429

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMD------------------------------- 287
            +TYN+LI GFC V D   A  L  +M+                                
Sbjct: 430 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 489

Query: 288 ---------------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                          NGV+PDV+T+N +I     +GK  +   L E M  RG+ PDT+TY
Sbjct: 490 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           +S++DG C   R+  A ++FVSM SK    +V ++N LIN  CK  +V+D + L+ EM  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 609

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I    I Y TL+ G  +VGN+  AL +  +M  + V PD+ T    + G      +  
Sbjct: 610 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 669

Query: 453 AVQVFQAIR 461
           AV + + ++
Sbjct: 670 AVAMLEDLQ 678



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 191/377 (50%), Gaps = 14/377 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A      M++ K SP + ++  L+    K  ++     L+  +   G+ P+    N +
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSM 366

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK      A  +   +     +P+  TF  LI+G C   RI +   L  ++     
Sbjct: 367 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 426

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N VT+NTLI+G C   +   AL L ++M++    +C PD+VT N+++DGLC +G +  
Sbjct: 427 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISS--GVC-PDIVTCNTLLDGLCDNGKLKD 483

Query: 243 AKELLLQMKDR-----------NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           A E+   M+              + P+V+TYN LICG      + EA+ L+ EM   G+ 
Sbjct: 484 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 543

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PD +T+++MI+  CK  ++D+  ++   M  +  +P+ VT+N+L++G+C  GR+    EL
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLEL 603

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M  +G   D   Y  LI    K   +  A+ +++EM+S  + P  IT   +L+G + 
Sbjct: 604 FCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWS 663

Query: 412 VGNLGDALKLIDKMQLN 428
              L  A+ +++ +Q++
Sbjct: 664 KEELERAVAMLEDLQMS 680



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 189/391 (48%), Gaps = 4/391 (1%)

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L +G    +    A+ LF +M+    +   P VV +  ++  + +    D    L  +M+
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLR---SRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + I  ++ ++N LI  FC       A   F ++   G+ PDVVTF  +++  C + ++ 
Sbjct: 107 RKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVS 166

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +       M +    P+ VT+ +LM+G C  GRI  A  L   M+  G +    +Y  ++
Sbjct: 167 EALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 372 NANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +  CK      A+ L R+M     I P+V+ Y+ ++  L + G   DA  L  +MQ   +
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD FT+ + I G C +G   +A Q+ Q +   K    + TYN LIN   K G+   A +
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAE 346

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L+  +  +G IP+ +T ++MI   CK+ ++D A D+   M  K C P   TF TL+ G+ 
Sbjct: 347 LYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYC 406

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
              +    + LLH+M    LV + ++ ++ +
Sbjct: 407 GAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 164/326 (50%), Gaps = 1/326 (0%)

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L  GF  +   ++A  LF +M+ +   P VV F  ++    +  + D V  L + M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           +  D  ++N L+  FC   ++  A   F  +   G   DV ++  L++  C + +V +A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
             + +M     RP+V+T+ TL++GL + G + +A+ L+D+M  + + P   T+ T +DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKNGFVLEAVQVFQAIRNCKCEL-RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           CK G  + A+ + + +      +  +  Y+ +I+ LCK GR   A  LF  +Q KG  PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           + T ++MI   C  G+   A  LL +M  +   P  VT+  L+  FV+  K  +   L  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYD 349

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDK 589
           +M    ++ + ++ +S +     +D+
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQDR 375



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 111/224 (49%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + +EDA+ L+ +ML  R  PSV+ +  L+  + ++      + L  KM+   +  D ++F
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I   C    +  A+  F  I        + T+  L++GLC   R+  A   FH++  
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
               P+VVT +T+++ LC+EG++ +A  LL  M      P+++T+ T++ G  +      
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            + LL KM     ++ ++ + S ++D L KD ++ +  N F  +
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/154 (20%), Positives = 60/154 (38%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   ++ M      P   +++ ++  L K  + D    +F  + S    P++   N LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 588

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  CK G       +   + R     + + +  LI G    G I  A  +F+++      
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 648

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           P+ +T   ++ G         A+ + E++    G
Sbjct: 649 PDTITIRNMLTGFWSKEELERAVAMLEDLQMSVG 682


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 205/587 (34%), Positives = 324/587 (55%), Gaps = 38/587 (6%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           D+  SG   I +++AV  F  MI+ +P P +  F  L + +AK KQY+ V++L K++ S 
Sbjct: 58  DKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESK 117

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+   ++ L+++INC C+    S AF  +G+I++  + P+TV FN L+NGLC E R+ EA
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV------NE--FGAI--- 219
             L  ++      P ++T NTL+NGLC       A+ L + MV      NE  +G +   
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237

Query: 220 -CKP--------------------DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            CK                     D V Y+ IIDGLCKDG +D A  L  +M+ +    +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           +ITYN+LI GFC    W +   L  +M+   + P+VVTF+ +I+   K+GK+ + ++LL+
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+QRG+ P+T+TYNSL+DGFC   R+  A ++   M+SKGC  D+ ++NILIN  CK  
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +++D + L+REM    +  + +TYNTL+ G  Q G L  A KL  +M    V PD  ++ 
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +DGLC NG + +A+++F  I   K EL I  Y  +I+G+C   ++  A  LF  L  K
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G   D    + MI  LC++  + KA+ L   M  +   P E+T+  L+R  + ++  +  
Sbjct: 538 GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTA 597

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYRECLNQFRHLL 602
             L+ +M +     +D+S    V+++LS    DK + + L+  R  L
Sbjct: 598 AELIEEMKSSGF-PADVSTVKMVINMLSSGELDKSFLDMLSTTRASL 643



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 1/236 (0%)

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           SY   +++     K +DAV L+R+M+  R  P+VI +N L S + +       L L  +M
Sbjct: 55  SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +   +    +T +  I+  C+   +  A      I     E     +N L+NGLC   R+
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +L  R+   G  P ++T +T+++ LC  G++  A  L+  M      P+EVT+  +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L    ++ + +  + LL KM  E+ +  D    S ++D L KD       N F  +
Sbjct: 235 LNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 186/558 (33%), Positives = 311/558 (55%), Gaps = 44/558 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M++ +P P +  F  L+ ++ + ++ D V+SL++++    +  D++   +L
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I C C       A    G++ +    P+ VTFN L++GLC E R+ EA  LF ++    C
Sbjct: 121 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAI----CK--------- 221
            PNVVTF TL+NGLCR    + A+ L + M+ +        +G I    CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 222 ------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                       P+VV Y++IID LCKDG    A+ L  +M+++ I P++ TYNS+I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W +A+ L  EM++  + PDVVT+NA+IN   K+GK  +   L + M+ RG+ P+T
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TY+S++DGFC   R+  A  +F  M +KGC  ++ ++N LI+  C  ++++D + L  E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +     TYNTL+ G + VG+L  AL L+ +M  + + PD  T  T +DGLC NG 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 450 VLEAVQVFQAIRNCKCEL-----------RIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +A+++F+ ++  K +L            ++TYN LI+GL   G+   A +L+  + H+
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +T S+MI  LCK+ ++D+A  +   M +K+  P+ VTF TL+ G+ +  +    
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 559 VVLLHKMAAEKLVVSDLS 576
           + L  +M    +V + ++
Sbjct: 601 LELFCEMGRRGIVANAIT 618



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/515 (31%), Positives = 273/515 (53%), Gaps = 15/515 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F  M +    P + +FT L+  L +  +    V+L  R+  +GL P       +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225

Query: 123 INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++ +CK G T  A  +L ++   S   PN V ++ +I+ LC +GR  +A  LF ++    
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P++ T+N++I G C +     A +L +EM+        PDVVTYN++I+   K+G   
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER---KISPDVVTYNALINAFVKEGKFF 342

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A+EL  +M  R I PN ITY+S+I GFC  +    A+ +F  M   G  P+++TFN +I
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C   ++D    LL  M + G+  DT TYN+L+ GF LVG ++ A +L   M+S G  
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSER-----------IRPSVITYNTLLSGLF 410
            D+ + + L++  C + K++DA+ +++ M   +           + P V TYN L+SGL 
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
             G   +A +L ++M    +VPD+ T+++ IDGLCK   + EA Q+F ++ +      + 
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           T+  LING CK GR+    +LF  +  +G + + +T  T+I    K G ++ A D+  +M
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +    P  +T   +L G     +  + V +L K+
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 208/429 (48%), Gaps = 49/429 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ ++  L K+ ++    +LF  +   G+FPDLF  N +I   C  G  S A  +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +L    +P+ VT+N LIN    EG+  EA  L+ ++      PN +T++++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +F  M  +    C P+++T+N++IDG C    +D   ELL +M +  +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMD------------------------------- 287
             TYN+LI GF  V D   A  L  EM+                                
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 288 ---------------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                          NGV+PDV T+N +I+    +GK  +   L E M  RG+ PDT+TY
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           +S++DG C   R+  A ++F SM SK    +V ++  LIN  CK  +V+D + L+ EM  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I  + ITY TL+ G  +VGN+  AL +  +M  + V PD+ T    + GL     +  
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 453 AVQVFQAIR 461
           AV + + ++
Sbjct: 670 AVAMLEKLQ 678



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 185/382 (48%), Gaps = 4/382 (1%)

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L +G    +    A+ LF +M+    +   P VV +  ++  + +    D    L  +M+
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLR---SRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + I  ++ ++  LI  FC       A   F ++   G+ PDVVTFN +++  C + ++ 
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVS 166

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   L   M +    P+ VT+ +LM+G C  GRI  A  L   M+  G +    +Y  ++
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 372 NANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +  CK      A+ L R+M     I P+V+ Y+ ++  L + G   DA  L  +MQ   +
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD FT+ + I G C +G   +A Q+ Q +   K    + TYN LIN   K G+   A +
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L+  +  +G IP+ +T S+MI   CK+ ++D A  +   M  K C P+ +TF TL+ G+ 
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 551 QNNKKSKVVVLLHKMAAEKLVV 572
              +    + LLH+M    LV 
Sbjct: 407 GAKRIDDGMELLHEMTETGLVA 428



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 162/318 (50%), Gaps = 1/318 (0%)

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L  GF  +   ++A  LF +M+ +   P VV F  ++    +  + D V  L + M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           +  D  ++  L+  FC   ++  A   F  +   G   DV ++N L++  C + +V +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ +M     RP+V+T+ TL++GL + G + +A+ L+D+M  + + P   T+ T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKNGFVLEAVQVFQAIRNCKCEL-RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           CK G  + A+ + + +      +  +  Y+ +I+ LCK GR   A  LF  +Q KG  PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           + T ++MI   C  G+   A  LL +M  +   P  VT+  L+  FV+  K  +   L  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 564 KMAAEKLVVSDLSLSSKV 581
           +M    ++ + ++ SS +
Sbjct: 350 EMLPRGIIPNTITYSSMI 367



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 113/224 (50%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + +EDA+ L+ +ML  R  PSV+ +  L+  + ++      + L  KM+   +  D ++F
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I   C    +  A+  F  +        + T+N L++GLC   R+  A  LFH++  
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
               P+VVT +T+++ LC+EG++ +A  LL  M      P+++T+ T++ G  +      
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            + LL KM     ++ ++ + S ++D L KD ++ +  N F  +
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 129/304 (42%), Gaps = 37/304 (12%)

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L  GF  +  +  A +LF  M+       V  +  L+    + ++ +  + LY++M  ++
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           IR  + ++  L+        L  AL    K+    + PD  TF T + GLC    V EA+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG--P------------ 500
            +F  +    C   + T+  L+NGLC+ GR+  A  L  R+   G  P            
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 501 ----------------------IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
                                 IP+VV  S +I  LCK+G+   A +L  +M+ K   P 
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             T+ +++ GF  + + S    LL +M  E+ +  D+   + +++   K+ K+ E    +
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 599 RHLL 602
             +L
Sbjct: 349 DEML 352



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 54/117 (46%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M     SP + +FT L+    K  + D  + LF  +   G+  +      L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           I    K+G  +GA  +   ++ S   P+T+T   ++ GL ++  +  A  + +KL +
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  350 bits (899), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 186/487 (38%), Positives = 285/487 (58%), Gaps = 4/487 (0%)

Query: 54  RHKSGNITS-NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGL 112
           RHK+    + N+A+  F+ M+   P P +  F  L + L + K Y TVVSL K++   G+
Sbjct: 63  RHKNRTFRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGI 122

Query: 113 FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
             D+  L +LINC C++      F VLG+I++    PN +TF+ LING C EG+I  A  
Sbjct: 123 SHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIE 182

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           LF  +      PNV +++ +I GLCR   T   +KL E M    G  C+PDVV YN+I+D
Sbjct: 183 LFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHM-KVVG--CEPDVVIYNTIVD 239

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
            LCKD  V++A  +  +MK   I P V+TY SLI G   +  WKEA  L  EM    + P
Sbjct: 240 RLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMP 299

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D+V F+ +I+  CK+G++ +   +L+ M + GV PD  TYN+LM+G+CL   +  AR++F
Sbjct: 300 DLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVF 359

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M+SKG   DV+S++IL+N  CK +++++A  L+ EM    + P  ++YNTL+SGL Q 
Sbjct: 360 EVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQA 419

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
               +A +L   M  N   P+  T++  +D L K G++ +A+ +F+A+ N   +  + TY
Sbjct: 420 RRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTY 479

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N +I+G+CK G+ K A +LF  L  KG  P+   C+  I  +CK G +D+A+     ME 
Sbjct: 480 NIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539

Query: 533 KNCVPSE 539
            +C P++
Sbjct: 540 DDCSPAQ 546



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 205/402 (50%), Gaps = 4/402 (0%)

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
           RN   AL  F  MVN       P +V +  +   L +         L  QM+   I+ +V
Sbjct: 70  RNINDALSAFNHMVNTNPL---PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDV 126

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           ++   LI  FC +        +  +++  G++P+V+TF+ +IN  C +GK+ +   L ++
Sbjct: 127 LSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDV 186

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M+ RG  P+  +Y+ ++ G C VG+ +   +L   M   GC  DV  YN +++  CKD+ 
Sbjct: 187 MVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRL 246

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           V +AV ++ +M    I P+V+TY +L+ GL  +G   +A  L+++M+  +++PD   F+ 
Sbjct: 247 VNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSV 306

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            ID +CK G V EA  + + +     E  + TYN L+NG C    +  A K+F  +  KG
Sbjct: 307 LIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKG 366

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            +PDV + S +++  CK  ++D+A  L  +M  +  +P  V++ TL+ G  Q  +  +  
Sbjct: 367 RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAE 426

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            L   M +      +L   S ++D LSK     + +  FR +
Sbjct: 427 ELFKDMHSNGY-PPNLVTYSILLDCLSKQGYLDQAMGLFRAM 467



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 220/453 (48%), Gaps = 4/453 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ V F  L + L           L K++ +     +V++   LIN  CR  +      +
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +++ + G   +P+V+T++++I+G C +G + +A EL   M  R   PNV +Y+ +I G
Sbjct: 149 LGKII-KLG--LEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKG 205

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C V    E   L   M   G +PDVV +N +++  CKD  +++   +   M   G+ P 
Sbjct: 206 LCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPT 265

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            VTY SL+ G   +GR   A  L   M       D+ ++++LI+  CK+ +V +A  + +
Sbjct: 266 VVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILK 325

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M    + P V TYNTL++G      + +A K+ + M     +PD F+F+  ++G CK  
Sbjct: 326 TMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAK 385

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EA Q+F  + +        +YN LI+GLC+  R   A +LF  +   G  P++VT S
Sbjct: 386 RIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYS 445

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            ++  L K+G +D+A  L   ME     P  VT+  ++ G  +  K      L  +++ +
Sbjct: 446 ILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVK 505

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            L  ++  + +  +D + K     E    FR +
Sbjct: 506 GLQPNNW-VCTPTIDGVCKGGLLDEAHKAFRQM 537



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 5/248 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G ++  EA      M +M   P + ++  L+       +      +F+ + S G  PD
Sbjct: 313 KEGEVS--EARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD 370

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F  ++L+N  CK      A  +   +      P+TV++N LI+GLC   R +EA  LFK
Sbjct: 371 VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFK 430

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            ++     PN+VT++ L++ L +      A+ LF  M N   +  KPD+VTYN +IDG+C
Sbjct: 431 DMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMEN---SGLKPDLVTYNIMIDGMC 487

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G    A+EL  ++  + + PN       I G C      EA   F +M  +   P   
Sbjct: 488 KYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQG 547

Query: 296 TFNAMINY 303
             N    Y
Sbjct: 548 CINGRATY 555


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 184/508 (36%), Positives = 304/508 (59%), Gaps = 3/508 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ +++   +P    F  +L  L K+K Y TV+ L +++   G+ P+L   N+L
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C++G+   AF V  +IL+  + P+T+TF  L  GLC +G+I +A     K+     
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGF 186

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + +++ TLI+GLC+   T  AL L + +    G + +P+VV YN+IID +CK   V++
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVD---GNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M  + I+P+V+TY++LI GFC +   K+A  LF +M+   ++PDV TFN ++N
Sbjct: 244 AFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVN 303

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CKDGKM +   + ++M+++G+ P+ VTYNSLMDG+CLV  +++A+ +F +M   G   
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ SY+I+IN  CK +K ++A+ L++EM  + I P V+TY++L+ GL + G +  AL+L+
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M    V P+  T+ + +D LCK   V +A+ +    ++   +  I TY+ LI GLC+ 
Sbjct: 424 DQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQS 483

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G+L+ A K+F  L  KG   DV   + MI   C EG  ++A  LL  ME   C+P   T+
Sbjct: 484 GKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             ++    + ++      LL +M A  L
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 169/344 (49%), Gaps = 1/344 (0%)

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N I+Y+S    F   +D  +A  LF  ++     P    FN ++    K      V  L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M  RG+ P+ V  N L++ FC +G I  A  +F  ++  G   D  ++  L    C  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +++ A   + ++++       I+Y TL+ GL +VG    AL L+ ++  N V P+   +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T ID +CK   V EA  +F  + +      + TY+ LI+G C +G+LK A  LF+++  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +   PDV T + +++  CK+G+M +   +   M  +   P+ VT+ +L+ G+    + +K
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              + + M A+  V  D+   S +++   K KK+ E +N F+ +
Sbjct: 349 AKSIFNTM-AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 32/228 (14%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   F+ M +   +P + S++I++    K K++D  ++LFK ++   + PD+   + L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K G  S A  ++ ++      PN  T+N +++ LC   ++ +A  L  K      
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGF 466

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMV------------------------NEFGA 218
            P++ T++ LI GLC++     A K+FE+++                        NE  A
Sbjct: 467 QPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALA 526

Query: 219 I--------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           +        C PD  TY  II  L K    D A++LL +M  R +  N
Sbjct: 527 LLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 187/498 (37%), Positives = 297/498 (59%), Gaps = 3/498 (0%)

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
           K  P P    F  +L  L K KQY T +SL +++  NG+ PD    NLL+NC  ++G   
Sbjct: 51  KNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIK 110

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            +F V  +IL+  + P+ VTF  LI GLC +G + +A     K+       + V++ TLI
Sbjct: 111 FSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLI 170

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           NGLCR   T  A++L   +    G + +P+VV Y++IID +CKD  V+ A +L  +M  +
Sbjct: 171 NGLCRVGETKAAVQLLRRVD---GKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSK 227

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I+P+V+TY+SLI GFC V   K A  LF  M+ + + P+V TF+ +I+  CK+GK+ + 
Sbjct: 228 RISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA 287

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             +L +M+++ V  D VTYNSLMDG+CLV ++++A+ LF  M  +G   DV+SY+I+IN 
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK + V++A+ L+ EM  ++I P+V+TYN+L+ GL + G    AL+L+D+M       +
Sbjct: 348 FCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSN 407

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+ + +D +CKN  V +A+ +   I+    +  I TY  LINGLCK+GRL  A K+F 
Sbjct: 408 IITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFE 467

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            L  KG  P++ T +++I+  C +G  D+   +L  M+   C+P+ +T+  L+    + +
Sbjct: 468 DLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKD 527

Query: 554 KKSKVVVLLHKMAAEKLV 571
           +  K   LL +M A  L+
Sbjct: 528 ENDKAEKLLREMIARGLL 545



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 1/162 (0%)

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           N+ +P +  F   +  L K      A+ + Q +     +    T N L+N   ++G +K 
Sbjct: 52  NNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKF 111

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           +  +F ++  KG  PD VT + +I  LC +G++ KA      + A+     +V++ TL+ 
Sbjct: 112 SFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLIN 171

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           G  +  +    V LL ++   KLV  ++ + S ++D + KDK
Sbjct: 172 GLCRVGETKAAVQLLRRVDG-KLVRPNVVMYSTIIDSMCKDK 212


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  350 bits (897), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 186/558 (33%), Positives = 310/558 (55%), Gaps = 44/558 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M++ +P P +  F  L+ ++ + ++ D V+SL++++    +  D++  N+L
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I C C       A    G+I +    P+ VTF  L++GLC E R+ EA   F ++    C
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAI----CK--------- 221
            PNVVTF TL+NGLCR    + A+ L + M+ +        +G I    CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 222 ------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                       P+VV Y++IID LCKDG    A+ L  +M+++ I P++ TYNS+I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W +A+ L  EM++  + PDVVT+NA+IN   K+GK  +   L + M+ RG+ P+T
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TY+S++DGFC   R+  A  +F  M +KGC  ++ ++N LI+  C  ++++D + L  E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +     TYNTL+ G + VG+L  AL L+ +M  + + PD  T  T +DGLC NG 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 450 VLEAVQVFQAIRNCKCEL-----------RIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +A+++F+ ++  K +L            ++TYN LI+GL   G+   A +L+  + H+
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +T S+MI  LCK+ ++D+A  +   M +K+  P+ VTF TL+ G+ +  +    
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 559 VVLLHKMAAEKLVVSDLS 576
           + L  +M    +V + ++
Sbjct: 601 LELFCEMGRRGIVANAIT 618



 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 162/515 (31%), Positives = 274/515 (53%), Gaps = 15/515 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+ FF  M +    P + +FT L+  L +  +    V+L  R+  +GL P       +
Sbjct: 166 SEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225

Query: 123 INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++ +CK G T  A  +L ++   S   PN V ++ +I+ LC +GR  +A  LF ++    
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P++ T+N++I G C +     A +L +EM+        PDVVTYN++I+   K+G   
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER---KISPDVVTYNALINAFVKEGKFF 342

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A+EL  +M  R I PN ITY+S+I GFC  +    A+ +F  M   G  P+++TFN +I
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C   ++D    LL  M + G+  DT TYN+L+ GF LVG ++ A +L   M+S G  
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSER-----------IRPSVITYNTLLSGLF 410
            D+ + + L++  C + K++DA+ +++ M   +           + P V TYN L+SGL 
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
             G   +A +L ++M    +VPD+ T+++ IDGLCK   + EA Q+F ++ +      + 
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           T+  LING CK GR+    +LF  +  +G + + +T  T+I    K G ++ A D+  +M
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +    P  +T   +L G     +  + V +L K+
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 208/429 (48%), Gaps = 49/429 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ ++  L K+ ++    +LF  +   G+FPDLF  N +I   C  G  S A  +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +L    +P+ VT+N LIN    EG+  EA  L+ ++      PN +T++++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +F  M  +    C P+++T+N++IDG C    +D   ELL +M +  +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMD------------------------------- 287
             TYN+LI GF  V D   A  L  EM+                                
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 288 ---------------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                          NGV+PDV T+N +I+    +GK  +   L E M  RG+ PDT+TY
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           +S++DG C   R+  A ++F SM SK    +V ++  LIN  CK  +V+D + L+ EM  
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I  + ITY TL+ G  +VGN+  AL +  +M  + V PD+ T    + GL     +  
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 453 AVQVFQAIR 461
           AV + + ++
Sbjct: 670 AVAMLEKLQ 678



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 184/382 (48%), Gaps = 4/382 (1%)

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L +G    +    A+ LF +M+    +   P VV +  ++  + +    D    L  +M+
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLR---SRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + I  ++ ++N LI  FC       A   F ++   G+ PDVVTF  +++  C + ++ 
Sbjct: 107 RKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVS 166

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +       M +    P+ VT+ +LM+G C  GRI  A  L   M+  G +    +Y  ++
Sbjct: 167 EALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 372 NANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +  CK      A+ L R+M     I P+V+ Y+ ++  L + G   DA  L  +MQ   +
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD FT+ + I G C +G   +A Q+ Q +   K    + TYN LIN   K G+   A +
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L+  +  +G IP+ +T S+MI   CK+ ++D A  +   M  K C P+ +TF TL+ G+ 
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 551 QNNKKSKVVVLLHKMAAEKLVV 572
              +    + LLH+M    LV 
Sbjct: 407 GAKRIDDGMELLHEMTETGLVA 428



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 161/318 (50%), Gaps = 1/318 (0%)

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L  GF  +   ++A  LF +M+ +   P VV F  ++    +  + D V  L + M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           +  D  ++N L+  FC   ++  A   F  +   G   DV ++  L++  C + +V +A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
             + +M     RP+V+T+ TL++GL + G + +A+ L+D+M  + + P   T+ T +DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 445 CKNGFVLEAVQVFQAIRNCKCEL-RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           CK G  + A+ + + +      +  +  Y+ +I+ LCK GR   A  LF  +Q KG  PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           + T ++MI   C  G+   A  LL +M  +   P  VT+  L+  FV+  K  +   L  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 564 KMAAEKLVVSDLSLSSKV 581
           +M    ++ + ++ SS +
Sbjct: 350 EMLPRGIIPNTITYSSMI 367



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 37/304 (12%)

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L  GF  +  +  A +LF  M+       V  +  L+    + ++ +  + LY++M  ++
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           IR  + ++N L+        L  AL    K+    + PD  TF T + GLC    V EA+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG--P------------ 500
             F  +    C   + T+  L+NGLC+ GR+  A  L  R+   G  P            
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 501 ----------------------IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
                                 IP+VV  S +I  LCK+G+   A +L  +M+ K   P 
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             T+ +++ GF  + + S    LL +M  E+ +  D+   + +++   K+ K+ E    +
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 599 RHLL 602
             +L
Sbjct: 349 DEML 352



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 54/117 (46%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M     SP + +FT L+    K  + D  + LF  +   G+  +      L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           I    K+G  +GA  +   ++ S   P+T+T   ++ GL ++  +  A  + +KL +
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  348 bits (893), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 194/514 (37%), Positives = 301/514 (58%), Gaps = 13/514 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ M+ M+ +P +  F  +L   AK K Y T VSL  RL   G+ PDL  LN+L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C MG  +  F VL +IL+  + P+T+TF  LI GLC +G++ +A     KL     
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + V++ TLING+C+  +T  A+KL  ++    G + KP+V  YN+IID LCK   V +
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKID---GRLTKPNVEMYNTIIDALCKYQLVSE 217

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +M  + I+ +V+TY +LI GFC     KEA  L  EM+   + P+V T+N +++
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+ +   +L +M++  V PD +TY++LMDG+ LV  + +A+ +F +M   G   
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTP 337

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV+SY ILIN  CK++ V++A+ L++EM  + + P ++TY++L+ GL + G +     LI
Sbjct: 338 DVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-----QAIRNCKCELRIETYNCLIN 477
           D+M+   +  +  T+ + IDGLCKNG +  A+ +F     Q IR C       T+  L++
Sbjct: 398 DEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSF-----TFTILLD 452

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           GLCK GRLK A + F  L  KG   DV   + MI+  CK+G +++A  +L  ME   CVP
Sbjct: 453 GLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVP 512

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           + VTF  ++    + ++  K   LL +M    L+
Sbjct: 513 NAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 36/254 (14%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           Q V+DAV  +  ML  R  P +I +N +L    ++ +   A+ L  +++L  + PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI--------------------- 476
              I+  C  G +     V   I     +    T+  LI                     
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157

Query: 477 --------------NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                         NG+CK+G  + A KL  ++  +   P+V   +T+I  LCK   + +
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A  L  +M AK      VT+ TL+ GF   +K  + + LL++M   K +  ++   + +V
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVL-KTINPNVYTYNILV 276

Query: 583 DLLSKDKKYRECLN 596
           D L K+ K +E  N
Sbjct: 277 DALCKEGKVKEAKN 290


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  348 bits (893), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 204/568 (35%), Positives = 313/568 (55%), Gaps = 35/568 (6%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I  ++AV  F  M + +P P +  F+ L +++A+ KQYD V+ L K++   
Sbjct: 42  ERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK 101

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  +L+ L+++INC C+    S AF  +G+I++  + P+TVTF+ LINGLC EGR+ EA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV------NE--FGAI--- 219
             L  ++      P ++T N L+NGLC       A+ L + MV      NE  +G +   
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221

Query: 220 -CKP--------------------DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            CK                     D V Y+ IIDGLCKDG +D A  L  +M+ +    +
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           +I Y +LI GFC    W +   L  +M+   + PDVV F+A+I+   K+GK+ +   L +
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MIQRG++PDTVTY SL+DGFC   ++ +A  +   MVSKGC  ++ ++NILIN  CK  
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++D + L+R+M    +    +TYNTL+ G  ++G L  A +L  +M    V PD  ++ 
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +DGLC NG   +A+++F+ I   K EL I  YN +I+G+C   ++  A  LF  L  K
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PDV T + MI  LCK+G + +A+ L   ME     P+  T+  L+R  +     +K 
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
             L+ ++      V D S    VVD+LS
Sbjct: 582 AKLIEEIKRCGFSV-DASTVKMVVDMLS 608



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 7/311 (2%)

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR---AREL 351
           V++   +     D K D    L + M +    P  + ++ L   F +V R  +     +L
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRL---FSVVARTKQYDLVLDL 94

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              M  KG  H++Y+ +I+IN  C+ +K+  A     +++     P  +T++TL++GL  
Sbjct: 95  CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCL 154

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G + +AL+L+D+M      P   T    ++GLC NG V +AV +   +     +    T
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y  ++  +CK G+   A +L  +++ +    D V  S +I  LCK+G +D A +L  +ME
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
            K      + + TL+RGF    +      LL  M   K +  D+   S ++D   K+ K 
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK-ITPDVVAFSALIDCFVKEGKL 333

Query: 592 RECLNQFRHLL 602
           RE     + ++
Sbjct: 334 REAEELHKEMI 344



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 1/178 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A   F  M+  +  P + S+ ILL  L  N + +  + +F+++  + +  D+ + N++I+
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            +C       A+ +   +      P+  T+N +I GLC +G + EA  LF+K+      P
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGAICKPDVVTYNSIIDGLCKDGFVD 241
           N  T+N LI       +   + KL EE+    F        +  + + DG  K  F+D
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLD 618


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 190/538 (35%), Positives = 307/538 (57%), Gaps = 38/538 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F  M+K +P P +  F+ LL+ +AK  ++D V+SL +++ + G+  + +  ++L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C+      A  VLG++++  + PN VT + L+NG C   RI EA  L  ++ V   
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 183 DPNVVTFNTLI-----------------------------------NGLCRTRNTLVALK 207
            PN VTFNTLI                                   NGLC+  +T +A  
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L  +M  E G + +P V+ YN+IIDGLCK   +D A  L  +M+ + I PNV+TY+SLI 
Sbjct: 243 LLNKM--EQGKL-EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
             C    W +A  L  +M++  + PDV TF+A+I+   K+GK+ +  +L + M++R ++P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             VTY+SL++GFC+  R+  A+++F  MVSK C  DV +YN LI   CK ++VE+ + ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           REM    +  + +TYN L+ GLFQ G+   A ++  +M  + V P+  T+ T +DGLCKN
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + +A+ VF+ ++  K E  I TYN +I G+CK G+++    LF  L  KG  PDVV  
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +TMI   C++G  ++A+ L  +M+    +P+   + TL+R  +++  +     L+ +M
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 207/367 (56%), Gaps = 3/367 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M + K  PG+  +  ++  L K K  D  ++LFK + + G+ P++   + LI+CLC  G 
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            S A  +L  ++     P+  TF+ LI+    EG+++EA +L+ ++   + DP++VT+++
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LING C       A ++FE MV++    C PDVVTYN++I G CK   V++  E+  +M 
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R +  N +TYN LI G     D   A+ +F EM+ +GV P+++T+N +++  CK+GK++
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 483

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K   + E + +  + P   TYN +++G C  G++    +LF ++  KG + DV +YN +I
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  C+    E+A  L++EM  +   P+   YNTL+    + G+   + +LI +M+     
Sbjct: 544 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603

Query: 432 PDSFTFA 438
            D+ T  
Sbjct: 604 GDASTIG 610



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 224/436 (51%), Gaps = 3/436 (0%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  + G +++S   P+ + F+ L++ +    +      L +++       N  T++ LIN
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             CR     +AL +  +M+ + G   +P++VT +S+++G C    + +A  L+ QM    
Sbjct: 125 CFCRRSQLPLALAVLGKMM-KLGY--EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PN +T+N+LI G    +   EA  L   M+  G QPD+VT+  ++N  CK G  D   
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            LL  M Q  + P  + YN+++DG C    +  A  LF  M +KG R +V +Y+ LI+  
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   +  DA  L  +M+  +I P V T++ L+    + G L +A KL D+M    + P  
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+++ I+G C +  + EA Q+F+ + +  C   + TYN LI G CK  R++   ++F  
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  +G + + VT + +I  L + G  D A ++  +M +    P+ +T+ TLL G  +N K
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481

Query: 555 KSKVVVLLHKMAAEKL 570
             K +V+   +   K+
Sbjct: 482 LEKAMVVFEYLQRSKM 497



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 212/402 (52%), Gaps = 3/402 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EA+   D M+     P + ++ +++  L K    D   +L  ++    L P + + N 
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+ LCK      A  +   +      PN VT++ LI+ LC  GR  +A+RL   +    
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +P+V TF+ LI+   +    + A KL++EMV        P +VTY+S+I+G C    +D
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR---SIDPSIVTYSSLINGFCMHDRLD 378

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +AK++   M  ++  P+V+TYN+LI GFC     +E   +F EM   G+  + VT+N +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
               + G  D    + + M+  GV P+ +TYN+L+DG C  G++ +A  +F  +      
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             +Y+YNI+I   CK  KVED   L+  +  + ++P V+ YNT++SG  + G+  +A  L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
             +M+ +  +P+S  + T I    ++G    + ++ + +R+C
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 219/442 (49%), Gaps = 41/442 (9%)

Query: 199 TRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           +RN L  LKL ++ V  FG + K    P ++ ++ ++  + K    D    L  QM++  
Sbjct: 53  SRNGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           I  N  TY+ LI  FC       A  +  +MM  G +P++VT ++++N  C   ++ +  
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L++ M   G  P+TVT+N+L+ G  L  + S A  L   MV+KGC+ D+ +Y +++N  
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231

Query: 375 CKD-----------------------------------QKVEDAVCLYREMLSERIRPSV 399
           CK                                    + ++DA+ L++EM ++ IRP+V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TY++L+S L   G   DA +L+  M    + PD FTF+  ID   K G ++EA +++  
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +  I TY+ LING C   RL  A ++F  +  K   PDVVT +T+I   CK  +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +++  ++  +M  +  V + VT+  L++G  Q         +  +M ++  V  ++   +
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYN 470

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            ++D L K+ K  + +  F +L
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYL 492


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 190/540 (35%), Positives = 308/540 (57%), Gaps = 38/540 (7%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            ++AV  F  M+K +P P +  F+ LL+ +AK  ++D V+SL +++ + G+  + +  ++L
Sbjct: 677  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 736

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            INC C+      A  VLG++++  + PN VT + L+NG C   RI EA  L  ++ V   
Sbjct: 737  INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 796

Query: 183  DPNVVTFNTLI-----------------------------------NGLCRTRNTLVALK 207
             PN VTFNTLI                                   NGLC+  +T +A  
Sbjct: 797  QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 856

Query: 208  LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
            L  +M  E G + +P V+ YN+IIDGLCK   +D A  L  +M+ + I PNV+TY+SLI 
Sbjct: 857  LLNKM--EQGKL-EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913

Query: 268  GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
              C    W +A  L  +M++  + PDV TF+A+I+   K+GK+ +  +L + M++R ++P
Sbjct: 914  CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973

Query: 328  DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
              VTY+SL++GFC+  R+  A+++F  MVSK C  DV +YN LI   CK ++VE+ + ++
Sbjct: 974  SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033

Query: 388  REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            REM    +  + +TYN L+ GLFQ G+   A ++  +M  + V P+  T+ T +DGLCKN
Sbjct: 1034 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 1093

Query: 448  GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
            G + +A+ VF+ ++  K E  I TYN +I G+CK G+++    LF  L  KG  PDVV  
Sbjct: 1094 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 1153

Query: 508  STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            +TMI   C++G  ++A+ L  +M+    +P+   + TL+R  +++  +     L+ +M +
Sbjct: 1154 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 1213



 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 169/490 (34%), Positives = 270/490 (55%), Gaps = 41/490 (8%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           +I  N+A+  F  M+K +P P +  F  LL+ + K K+YD V+SL K++   G+  DL+ 
Sbjct: 166 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY- 224

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
                                             TFN +IN  C   ++  A  +  K+ 
Sbjct: 225 ----------------------------------TFNIVINCFCCCFQVSLALSILGKML 250

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +P+ VT  +L+NG CR      A+ L ++MV E G   KPD+V YN+IID LCK  
Sbjct: 251 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-EIGY--KPDIVAYNAIIDSLCKTK 307

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V+ A +   +++ + I PNV+TY +L+ G C    W +A  L  +M+   + P+V+T++
Sbjct: 308 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 367

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+++   K+GK+ +   L E M++  ++PD VTY+SL++G CL  RI  A ++F  MVSK
Sbjct: 368 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 427

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  DV SYN LIN  CK ++VED + L+REM    +  + +TYNTL+ G FQ G++  A
Sbjct: 428 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 487

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            +   +M    + PD +T+   + GLC NG + +A+ +F+ ++  + +L I TY  +I G
Sbjct: 488 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 547

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           +CK G+++ A  LF  L  KG  PD+VT +TM+  LC +G + +   L   M+ +  + +
Sbjct: 548 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 607

Query: 539 EVTFCTLLRG 548
           +   CTL  G
Sbjct: 608 D---CTLSDG 614



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 207/367 (56%), Gaps = 3/367 (0%)

Query: 72   MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
            M + K  PG+  +  ++  L K K  D  ++LFK + + G+ P++   + LI+CLC  G 
Sbjct: 861  MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 920

Query: 132  TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
             S A  +L  ++     P+  TF+ LI+    EG+++EA +L+ ++   + DP++VT+++
Sbjct: 921  WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 980

Query: 192  LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
            LING C       A ++FE MV++    C PDVVTYN++I G CK   V++  E+  +M 
Sbjct: 981  LINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 1037

Query: 252  DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             R +  N +TYN LI G     D   A+ +F EM+ +GV P+++T+N +++  CK+GK++
Sbjct: 1038 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 1097

Query: 312  KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
            K   + E + +  + P   TYN +++G C  G++    +LF ++  KG + DV +YN +I
Sbjct: 1098 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 1157

Query: 372  NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
            +  C+    E+A  L++EM  +   P+   YNTL+    + G+   + +LI +M+     
Sbjct: 1158 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 1217

Query: 432  PDSFTFA 438
             D+ T  
Sbjct: 1218 GDASTIG 1224



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 227/436 (52%), Gaps = 3/436 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ V FN L++ +    +      L KK+ V     ++ TFN +IN  C      +AL +
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M+ + G   +PD VT  S+++G C+   V  A  L+ +M +    P+++ YN++I  
Sbjct: 246 LGKML-KLGY--EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 302

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C      +A   F E+   G++P+VVT+ A++N  C   +     RLL  MI++ + P+
Sbjct: 303 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 362

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +TY++L+D F   G++  A+ELF  MV      D+ +Y+ LIN  C   ++++A  ++ 
Sbjct: 363 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 422

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+S+     V++YNTL++G  +   + D +KL  +M    +V ++ T+ T I G  + G
Sbjct: 423 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 482

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            V +A + F  +        I TYN L+ GLC  G L+ A  +F  +Q +    D+VT +
Sbjct: 483 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 542

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I  +CK G++++A  L   +  K   P  VT+ T++ G        +V  L  KM  E
Sbjct: 543 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 602

Query: 569 KLVVSDLSLSSKVVDL 584
            L+ +D +LS   + L
Sbjct: 603 GLMKNDCTLSDGDITL 618



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 224/436 (51%), Gaps = 3/436 (0%)

Query: 135  AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
            A  + G +++S   P+ + F+ L++ +    +      L +++       N  T++ LIN
Sbjct: 679  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 738

Query: 195  GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
              CR     +AL +  +M+ + G   +P++VT +S+++G C    + +A  L+ QM    
Sbjct: 739  CFCRRSQLPLALAVLGKMM-KLGY--EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 255  INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
              PN +T+N+LI G    +   EA  L   M+  G QPD+VT+  ++N  CK G  D   
Sbjct: 796  YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 315  RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
             LL  M Q  + P  + YN+++DG C    +  A  LF  M +KG R +V +Y+ LI+  
Sbjct: 856  NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915

Query: 375  CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            C   +  DA  L  +M+  +I P V T++ L+    + G L +A KL D+M    + P  
Sbjct: 916  CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975

Query: 435  FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             T+++ I+G C +  + EA Q+F+ + +  C   + TYN LI G CK  R++   ++F  
Sbjct: 976  VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 1035

Query: 495  LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            +  +G + + VT + +I  L + G  D A ++  +M +    P+ +T+ TLL G  +N K
Sbjct: 1036 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 1095

Query: 555  KSKVVVLLHKMAAEKL 570
              K +V+   +   K+
Sbjct: 1096 LEKAMVVFEYLQRSKM 1111



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 212/402 (52%), Gaps = 3/402 (0%)

Query: 62   SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            ++EA+   D M+     P + ++ +++  L K    D   +L  ++    L P + + N 
Sbjct: 816  ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 875

Query: 122  LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            +I+ LCK      A  +   +      PN VT++ LI+ LC  GR  +A+RL   +    
Sbjct: 876  IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935

Query: 182  CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             +P+V TF+ LI+   +    + A KL++EMV        P +VTY+S+I+G C    +D
Sbjct: 936  INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS---IDPSIVTYSSLINGFCMHDRLD 992

Query: 242  KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            +AK++   M  ++  P+V+TYN+LI GFC     +E   +F EM   G+  + VT+N +I
Sbjct: 993  EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 1052

Query: 302  NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
                + G  D    + + M+  GV P+ +TYN+L+DG C  G++ +A  +F  +      
Sbjct: 1053 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112

Query: 362  HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
              +Y+YNI+I   CK  KVED   L+  +  + ++P V+ YNT++SG  + G+  +A  L
Sbjct: 1113 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 1172

Query: 422  IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
              +M+ +  +P+S  + T I    ++G    + ++ + +R+C
Sbjct: 1173 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 1214



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 156/631 (24%), Positives = 288/631 (45%), Gaps = 89/631 (14%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            ++G++  ++A  FF  M     SP + ++ ILL  L  N + +  + +F+ +    +  D
Sbjct: 480  QAGDV--DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 537

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +     +I  +CK G    A+ +   +      P+ VT+  +++GLC +G + E   L+ 
Sbjct: 538  IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 597

Query: 176  KLN-------------------------VFACDPNVVTFNTLINGLCR------------ 198
            K+                          + +C         + +G+C+            
Sbjct: 598  KMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGK 657

Query: 199  ---------TRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKE 245
                     +RN L  LKL ++ V  FG + K    P ++ ++ ++  + K    D    
Sbjct: 658  TSYDYREKLSRNGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS 716

Query: 246  LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
            L  QM++  I  N  TY+ LI  FC       A  +  +MM  G +P++VT ++++N  C
Sbjct: 717  LGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYC 776

Query: 306  KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
               ++ +   L++ M   G  P+TVT+N+L+ G  L  + S A  L   MV+KGC+ D+ 
Sbjct: 777  HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV 836

Query: 366  SYNILINANCKD-----------------------------------QKVEDAVCLYREM 390
            +Y +++N  CK                                    + ++DA+ L++EM
Sbjct: 837  TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 896

Query: 391  LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
             ++ IRP+V+TY++L+S L   G   DA +L+  M    + PD FTF+  ID   K G +
Sbjct: 897  ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 956

Query: 451  LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            +EA +++  +     +  I TY+ LING C   RL  A ++F  +  K   PDVVT +T+
Sbjct: 957  VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 1016

Query: 511  IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            I   CK  ++++  ++  +M  +  V + VT+  L++G  Q         +  +M ++  
Sbjct: 1017 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG- 1075

Query: 571  VVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            V  ++   + ++D L K+ K  + +  F +L
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 200/394 (50%), Gaps = 4/394 (1%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A+ LF +MV        P +V +N ++  + K    D    L  +M+   I  ++ T+N 
Sbjct: 172 AIDLFSDMVKSRPF---PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           +I  FCC      A  +  +M+  G +PD VT  +++N  C+  ++     L++ M++ G
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD V YN+++D  C   R++ A + F  +  KG R +V +Y  L+N  C   +  DA 
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L  +M+ ++I P+VITY+ LL    + G + +A +L ++M    + PD  T+++ I+GL
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C +  + EA Q+F  + +  C   + +YN LING CK  R++   KLF  +  +G + + 
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           VT +T+I    + G +DKA +    M+     P   T+  LL G   N +  K +V+   
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           M   ++ + D+   + V+  + K  K  E  + F
Sbjct: 529 MQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLF 561



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 139/296 (46%), Gaps = 1/296 (0%)

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           +D K++    L   M++    P  V +N L+     + +      L   M   G R+D+Y
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           ++NI+IN  C   +V  A+ +  +ML     P  +T  +L++G  +   + DA+ L+DKM
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
                 PD   +   ID LCK   V +A   F+ I        + TY  L+NGLC   R 
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +L   +  K   P+V+T S ++    K G++ +A +L  +M   +  P  VT+ +L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + G   +++  +   +   M + K  ++D+   + +++   K K+  + +  FR +
Sbjct: 405 INGLCLHDRIDEANQMFDLMVS-KGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 459


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 188/535 (35%), Positives = 306/535 (57%), Gaps = 32/535 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F  M+K +P P +  F+ LL+ +AK  ++D V+SL +++ + G+  + +  ++L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSIL 122

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C+      A  VLG++++  + PN VT + L+NG C   RI EA  L  ++ V   
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAI----CK--------- 221
            PN VTFNTLI+GL        A+ L + MV +        +G +    CK         
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFI 242

Query: 222 -----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                      P V+ Y +IIDGLCK+  +D A  L  +M+ + I PNV+TY+SLI   C
Sbjct: 243 LLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
               W +A  L  +M++  + PDV TF+A+I+   K+GK+ +  +L + M++R ++P  V
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TY+SL++GFC+  R+  A+++F  MVSK C  DV SY+ LI   CK ++V++ + L+REM
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREM 422

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
               +  + +TY TL+ GLFQ G+   A ++  +M  + V P+  T+ T +DGLCKNG +
Sbjct: 423 SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            +A+ VF+ ++  K E  I TYN +I G+CK G+++    LF  L  KG  PDVV  +TM
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           I   C++G  ++A+ L  +M+    +P+   + TL+R  +++  +     L+ +M
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 120/374 (32%), Positives = 211/374 (56%), Gaps = 3/374 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A    + M + K  PG+  +T ++  L KNK  D  ++LFK + + G+ P++   + LI+
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
           CLC  G  S A  +L  ++     P+  TF+ LI+    EG+++EA +L+ ++   + DP
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           ++VT+++LING C       A ++FE MV++    C PDVV+Y+++I G CK   VD+  
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVSYSTLIKGFCKAKRVDEGM 416

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           EL  +M  R +  N +TY +LI G     D   A+ +F EM+ +GV P+++T+N +++  
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK+GK++K   + E + +  + P   TYN +++G C  G++    +LF ++  KG + DV
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN +I+  C+    E+A  L++EM  +   P+   YNTL+    + G+   + +LI +
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596

Query: 425 MQLNDVVPDSFTFA 438
           M+      D+ T  
Sbjct: 597 MRSCGFAGDASTIG 610



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 229/453 (50%), Gaps = 40/453 (8%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           +++  LN    S  I+  EAV   D M      P   +F  L+  L  + +    V+L  
Sbjct: 153 TLSSLLNGYCHSKRIS--EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALID 210

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
           R+ + G  PDL    +++N LCK G T  AF++L ++ +    P  + +  +I+GLC   
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNK 270

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
            + +A  LFK++      PNVVT+++LI+ LC       A +L  +M+        PDV 
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER---KINPDVF 327

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           T++++ID   K+G + +A++L  +M  R+I+P+++TY+SLI GFC  D   EAK +F  M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG--------------------- 324
           +     PDVV+++ +I   CK  ++D+   L   M QRG                     
Sbjct: 388 VSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDC 447

Query: 325 --------------VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
                         V P+ +TYN+L+DG C  G++ +A  +F  +        +Y+YNI+
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I   CK  KVED   L+  +  + ++P V+ YNT++SG  + G+  +A  L  +M+ +  
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +P+S  + T I    ++G    + ++ + +R+C
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 223/436 (51%), Gaps = 3/436 (0%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  + G +++S   P+ + F+ L++ +    +      L +++       N  T++ LIN
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILIN 124

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             CR     +AL +  +M+ + G   +P++VT +S+++G C    + +A  L+ QM    
Sbjct: 125 CFCRRSQLPLALAVLGKMM-KLGY--EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PN +T+N+LI G    +   EA  L   M+  G QPD+VT+  ++N  CK G  D   
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            LL  M Q  + P  + Y +++DG C    +  A  LF  M +KG R +V +Y+ LI+  
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   +  DA  L  +M+  +I P V T++ L+    + G L +A KL D+M    + P  
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+++ I+G C +  + EA Q+F+ + +  C   + +Y+ LI G CK  R+    +LF  
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFRE 421

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  +G + + VT +T+I  L + G  D A ++  +M +    P+ +T+ TLL G  +N K
Sbjct: 422 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481

Query: 555 KSKVVVLLHKMAAEKL 570
             K +V+   +   K+
Sbjct: 482 LEKAMVVFEYLQRSKM 497



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 221/442 (50%), Gaps = 41/442 (9%)

Query: 199 TRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           +RN L  LKL ++ V  FG + K    P ++ ++ ++  + K    D    L  QM++  
Sbjct: 53  SRNGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           +  N  TY+ LI  FC       A  +  +MM  G +P++VT ++++N  C   ++ +  
Sbjct: 112 MPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN-- 372
            L++ M   G  P+TVT+N+L+ G  L  + S A  L   MV+KGC+ D+ +Y +++N  
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGL 231

Query: 373 ---------------------------------ANCKDQKVEDAVCLYREMLSERIRPSV 399
                                              CK++ ++DA+ L++EM ++ IRP+V
Sbjct: 232 CKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNV 291

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TY++L+S L   G   DA +L+  M    + PD FTF+  ID   K G ++EA +++  
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +  I TY+ LING C   RL  A ++F  +  K   PDVV+ ST+I   CK  +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +D+  +L  +M  +  V + VT+ TL++G  Q         +  +M ++  V  ++   +
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYN 470

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            ++D L K+ K  + +  F +L
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYL 492


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 187/534 (35%), Positives = 315/534 (58%), Gaps = 6/534 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ +++   +P    F  +L  L K+K Y TV+ L +++   G+ P+L   N+L
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C++G+   AF V  +IL+  + P+T+TF  LI GLC +G+I +A     K+     
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGF 186

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + +++ TLI+GLC+   T  AL L + +    G + +P+VV YN+IID +CK   V++
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVD---GNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M  + I+P+V+TY++LI GFC +    +A  LF +M+   ++PDV TFN ++N
Sbjct: 244 AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVN 303

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CKDGKM +   + ++M+++G+ P+ VTYNSLMDG+CLV  +++A+ +F +M   G   
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ SY+I+IN  CK +K ++A+ L++EM  + I P V+TY++L+ GL + G +  AL+L+
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M    V P   T+ + +D LCK   V +A+ +   +++   +  + TY+ LI GLC+ 
Sbjct: 424 DQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQS 483

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G+L+ A K+F  L  KG   +V T + MI   C EG  ++A  LL  ME   C+P   T+
Sbjct: 484 GKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL---SSKVVDLLSKDKKYRE 593
             ++    + ++      LL +M A  +    +++     K  D+ S+ K   E
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMIARGVRPRQIAIWFQKKKEYDVSSEPKTLTE 597



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 169/344 (49%), Gaps = 1/344 (0%)

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N I+Y+S    F   +D  +A  LF  ++     P    FN ++    K      V  L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M  RG+ P+ V  N L++ FC +G I  A  +F  ++  G   D  ++  LI   C  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +++ A   + ++++       I+Y TL+ GL +VG    AL L+ ++  N V P+   +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T ID +CK   V EA  +F  + +      + TY+ LI+G C +G+L  A  LF+++  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +   PDV T + +++  CK+G+M +   +   M  +   P+ VT+ +L+ G+    + +K
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              + + M A+  V  D+   S +++   K KK+ E +N F+ +
Sbjct: 349 AKSIFNTM-AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 179/455 (39%), Positives = 279/455 (61%), Gaps = 3/455 (0%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           GL P+   LN+LINC C++      F VL + ++    P  VTF  LINGL   G+  +A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             LF  +    C P+  T+ T+INGLC+   T +A  LF++M     A C+ +VVTY+++
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEE---AGCQLNVVTYSTL 121

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           I  LCK   V++A ++   MK ++I+P + TY SLI G C    WKEA  L  EM    +
Sbjct: 122 IHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNI 181

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P+VVTFN +++  CK+GK+     +L+ M + GV PD VTYNSLM G+ +   +  AR+
Sbjct: 182 MPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARK 241

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF  M++KGC+ DV+SY+ILIN  CK +++++A  L+ EM+ +   P+ ++YNTL+ GL 
Sbjct: 242 LFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLC 301

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           Q+G L +A  L   M  N  +P+ +T+A  +DG CK G++ +A ++F+A+++   +  + 
Sbjct: 302 QLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 361

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            YN L+N +CK G LK A +LF  L   G  P+V   +T+I+ LCKEG +D+A +   +M
Sbjct: 362 MYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 421

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           E   C P E ++  ++RGF+Q+  +S+ V L+ +M
Sbjct: 422 EDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEM 456



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/436 (32%), Positives = 239/436 (54%), Gaps = 3/436 (0%)

Query: 73  IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
           IK+   P + +FT L+  L K  ++   V LF  + + G  PD +    +IN LCK+G T
Sbjct: 37  IKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGET 96

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
           + A  +  ++  +    N VT++ LI+ LC   R+ EA  +F  +      P + T+ +L
Sbjct: 97  ALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSL 156

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           I GLC       A  L  EM +       P+VVT+N ++D  CK+G V  A+ +L  M +
Sbjct: 157 IQGLCNFSRWKEASALLNEMTS---LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTE 213

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
             + P+V+TYNSL+ G+    +  EA+ LF  M+  G +PDV +++ +IN  CK  ++D+
Sbjct: 214 MGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDE 273

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             +L   MI +G  P+ V+YN+L+ G C +GR+  A++LF +M + G   ++Y+Y IL++
Sbjct: 274 AKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLD 333

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             CK   +  A  L+R M S  ++P+++ YN L++ + + GNL DA +L  ++ +  + P
Sbjct: 334 GFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQP 393

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           +   + T I+GLCK G + EA++ F+ + +  C     +YN +I G  +      A  L 
Sbjct: 394 NVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLI 453

Query: 493 HRLQHKGPIPDVVTCS 508
             ++ +G I D  T +
Sbjct: 454 GEMRDRGFITDAGTTA 469



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 205/399 (51%), Gaps = 3/399 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  FD M+     P   ++T ++  L K  +      LFK++   G   ++   + LI
Sbjct: 63  QAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLI 122

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK    + A  +   +     +P   T+  LI GLC   R  EA+ L  ++      
Sbjct: 123 HSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIM 182

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNVVTFN L++  C+    L A  + + M  E G   +PDVVTYNS++ G      V +A
Sbjct: 183 PNVVTFNVLVDTFCKEGKVLAAEGVLKTMT-EMGV--EPDVVTYNSLMYGYSMWTEVVEA 239

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           ++L   M  +   P+V +Y+ LI G+C      EAK LF EM+  G  P+ V++N +I+ 
Sbjct: 240 RKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G++ +   L + M   G  P+  TY  L+DGFC  G + +A  LF +M S   + +
Sbjct: 300 LCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 359

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           +  YNIL+NA CK   ++DA  L+ E+    ++P+V  Y T+++GL + G L +AL+   
Sbjct: 360 LVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFR 419

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            M+ +   PD F++   I G  ++     AV +   +R+
Sbjct: 420 NMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRD 458



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 186/388 (47%), Gaps = 36/388 (9%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+   ++PN  T N LI  FC +        +  + +  G+QP +VTF  +IN   K GK
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
             +   L + M+ RG  PD  TY ++++G C +G  + A  LF  M   GC+ +V +Y+ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI++ CK ++V +A+ ++  M ++ I P++ TY +L+ GL       +A  L+++M   +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL-------------- 475
           ++P+  TF   +D  CK G VL A  V + +     E  + TYN L              
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 476 ---------------------INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
                                ING CK  R+  A +LF+ + H+G  P+ V+ +T+IH L
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C+ G++ +A DL  +M     +P+  T+  LL GF +     K   L   M +  L   +
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYL-KPN 359

Query: 575 LSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           L + + +V+ + K    ++    F  L 
Sbjct: 360 LVMYNILVNAMCKSGNLKDARELFSELF 387



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 165/328 (50%), Gaps = 3/328 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+  F  M     SP + ++T L+  L    ++    +L   + S  + P++   N+L
Sbjct: 132 NEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVL 191

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK G    A  VL  +      P+ VT+N L+ G      ++EA +LF  +    C
Sbjct: 192 VDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGC 251

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V +++ LING C+ +    A +LF EM+++      P+ V+YN++I GLC+ G + +
Sbjct: 252 KPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGST---PNNVSYNTLIHGLCQLGRLRE 308

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++L   M      PN+ TY  L+ GFC      +A  LF  M    ++P++V +N ++N
Sbjct: 309 AQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVN 368

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G +     L   +   G+ P+   Y ++++G C  G +  A E F +M   GC  
Sbjct: 369 AMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPP 428

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREM 390
           D +SYN++I    + +    AV L  EM
Sbjct: 429 DEFSYNVIIRGFLQHKDESRAVHLIGEM 456



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 3/191 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F+ MI    +P   S+  L+  L +  +      LFK +++NG  P+L+   +L
Sbjct: 272 DEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAIL 331

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK G    AF +   +  +   PN V +N L+N +C  G + +A  LF +L V   
Sbjct: 332 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGL 391

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV  + T+INGLC+      AL+ F  M ++    C PD  +YN II G  +     +
Sbjct: 392 QPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDG---CPPDEFSYNVIIRGFLQHKDESR 448

Query: 243 AKELLLQMKDR 253
           A  L+ +M+DR
Sbjct: 449 AVHLIGEMRDR 459


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 189/558 (33%), Positives = 307/558 (55%), Gaps = 48/558 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M++ +P P +  F  L+ ++ + ++ D V+SL++++    +  D++  N+L
Sbjct: 59  EDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNIL 118

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I C C       A    G+I +  F P+ VTF+ L++GLC E R+ EA  LF ++    C
Sbjct: 119 IKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----C 174

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAIC-------------- 220
            PNVVTF TL+NGLCR    + A+ L + MV +        +G I               
Sbjct: 175 RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALN 234

Query: 221 -----------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                      KP+VV Y++IIDGL KDG    A  L  +M+++ I P++ TYN +I GF
Sbjct: 235 LLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGF 294

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W EA+ L  EM++  + P+VVT++A+IN   K+ K  +   L + M+ RG+ P+T
Sbjct: 295 CSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNT 354

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TYNS++DGFC   R+  A  +F  M +KGC  DV+++N LI+  C  ++++D   L  E
Sbjct: 355 ITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHE 414

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +     TYNTL+ G   VG+L  AL L  +M  + V PD  T  T +DGLC NG 
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 474

Query: 450 VLEAVQVFQAIRNCKCEL-----------RIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +A+++F+A++  K +L            ++TYN LI+GL   G+   A +L+  + H+
Sbjct: 475 LKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHR 534

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +P+ +T S+MI+ LCK+ ++D+A  +   M +K+  P  VTF TL+ G+ +  +    
Sbjct: 535 GIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDG 594

Query: 559 VVLLHKMAAEKLVVSDLS 576
           + L  +M    +V   ++
Sbjct: 595 LELFCEMGRRGIVADAIT 612



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 207/429 (48%), Gaps = 49/429 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ ++  L K+ ++    +L+  +   G+FPDLF  N +I+  C  G  S A  +
Sbjct: 247 PNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRL 306

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +L     PN VT++ LIN    E +  EA  L+ ++      PN +T+N++I+G C+
Sbjct: 307 LQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCK 366

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +F  M  +    C PDV T+N++IDG C    +D   ELL +M +  +  +
Sbjct: 367 QNRLDAAEHMFYVMATKG---CSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVAD 423

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMD------------------------------- 287
             TYN+LI GFC V D   A  L  +M+                                
Sbjct: 424 TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 483

Query: 288 ---------------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                          NGV+PDV T+N +I+    +GK  +   L + M  RG+ P+T+TY
Sbjct: 484 AMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITY 543

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           +S+++G C   R+  A ++F SM SK    DV ++N L++  CK  +V+D + L+ EM  
Sbjct: 544 SSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGR 603

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I    ITY TL+ G  +VGN+  AL +  +M  + V PD+ T  + +  L     +  
Sbjct: 604 RGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKR 663

Query: 453 AVQVFQAIR 461
           AV + + ++
Sbjct: 664 AVAMLEDLQ 672



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 194/377 (51%), Gaps = 14/377 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA      M++ K +P + +++ L+    K +++     L+  +   G+ P+    N +
Sbjct: 301 SEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSM 360

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK      A  +   +     +P+  TFN LI+G C   RI +   L  ++     
Sbjct: 361 IDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGL 420

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +  T+NTLI+G C   +   AL L ++M++    +C PD+VT N+++DGLC +G +  
Sbjct: 421 VADTTTYNTLIHGFCLVGDLNAALDLSQQMISS--GVC-PDIVTCNTLLDGLCDNGKLKD 477

Query: 243 AKELLLQMKDR-----------NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           A E+   M+              + P+V TYN LI G      + EA+ L+ EM   G+ 
Sbjct: 478 ALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIV 537

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           P+ +T+++MIN  CK  ++D+  ++ + M  +  +PD VT+N+L+ G+C  GR+    EL
Sbjct: 538 PNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLEL 597

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M  +G   D  +Y  LI+   K   +  A+ +++EM+S  + P  IT  ++L+ L+ 
Sbjct: 598 FCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWS 657

Query: 412 VGNLGDALKLIDKMQLN 428
              L  A+ +++ +Q++
Sbjct: 658 KEELKRAVAMLEDLQMS 674



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 169/340 (49%), Gaps = 40/340 (11%)

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR- 323
           L  GF  +   ++A  LF +M+ +   P V+ FN ++    +  + D V  L + M ++ 
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 324 ----------------------------------GVNPDTVTYNSLMDGFCLVGRISRAR 349
                                             G  PD VT+++L+ G C+  R+S A 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +LF  M    CR +V ++  L+N  C++ +V +AV L   M+ + ++P+ ITY T++ G+
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 410 FQVGNLGDALKLIDKM-QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
            ++G+   AL L+ KM +++ + P+   ++  IDGL K+G   +A  ++  ++       
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + TYNC+I+G C  GR   A +L   +  +   P+VVT S +I+   KE +  +A +L  
Sbjct: 284 LFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYD 343

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +M  +  +P+ +T+ +++ GF + N+      + + MA +
Sbjct: 344 EMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK 383



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 6/269 (2%)

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L  GF  +  +  A +LF  MV       V  +N L+    + ++ +  + LY++M  ++
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I   V ++N L+        L  AL    K+      PD  TF+T + GLC    V EA+
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +F  +    C   + T+  L+NGLC+ GR+  A  L  R+   G  P+ +T  T++  +
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 515 CKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           CK G    A +LL  ME  + + P+ V +  ++ G  ++ + S    L  +M  EK +  
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEM-QEKGIFP 282

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           DL   + ++D      ++ E     + +L
Sbjct: 283 DLFTYNCMIDGFCSSGRWSEAQRLLQEML 311


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 185/480 (38%), Positives = 290/480 (60%), Gaps = 3/480 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ M+ M+ +P +  F  +L   AK K Y T VSL  RL   G+ PDL  LN+L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C MG  +  F VL +IL+  + P+TVT N LI GLC +G++ +A     KL     
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V++ TLING+C+  +T  A+KL +++    G + KP+VV Y++IID LCK   V +
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKID---GRLTKPNVVMYSTIIDALCKYQLVSE 217

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +M  + I+ +V+TY++LI GFC     KEA  L  EM+   + P+V T+N +++
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+ +   +L +M++  V PD +TY++LMDG+ LV  + +A+ +F +M   G   
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV++Y ILIN  CK++ V++A+ L++EM  + + P ++TY++L+ GL + G +     LI
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M       +  T+++ IDGLCKNG +  A+ +F  +++        T+  L++GLCK 
Sbjct: 398 DEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKG 457

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GRLK A ++F  L  KG   +V T + MI   CK+G +++A  +L  ME   C+P  VTF
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTF 517



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/414 (31%), Positives = 212/414 (51%), Gaps = 3/414 (0%)

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           R+L    TP  + FN +++          A  L  +L +    P+++T N LIN  C   
Sbjct: 49  RMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
                  +  +++        PD VT N++I GLC  G V KA     ++  +    N +
Sbjct: 109 QITFGFSVLAKILKRG---YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV 165

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           +Y +LI G C + D + A  L  ++     +P+VV ++ +I+  CK   + +   L   M
Sbjct: 166 SYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEM 225

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
             +G++ D VTY++L+ GFC+ G++  A  L   MV K    +VY+YNIL++A CK+ KV
Sbjct: 226 TVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A  +   ML   ++P VITY+TL+ G F V  +  A  + + M L  V PD  T+   
Sbjct: 286 KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 345

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+G CKN  V EA+ +F+ +        I TY+ LI+GLCK GR+     L   +  +G 
Sbjct: 346 INGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQ 405

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             +V+T S++I  LCK G +D+A  L   M+ +   P+  TF  LL G  +  +
Sbjct: 406 PANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 459



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 244/492 (49%), Gaps = 3/492 (0%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D  VS F R+      P +   N +++   KM   S A  +  R+      P+ +T N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           IN  C  G+I     +  K+      P+ VT NTLI GLC       AL   ++++ +  
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
            + +   V+Y ++I+G+CK G    A +LL ++  R   PNV+ Y+++I   C      E
Sbjct: 161 QLNQ---VSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  LF EM   G+  DVVT++ +I   C +GK+ +   LL  M+ + +NP+  TYN L+D
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
             C  G++  A+ +   M+    + DV +Y+ L++      +V+ A  ++  M    + P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            V TY  L++G  +   + +AL L  +M   ++VP   T+++ IDGLCK+G +     + 
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             + +      + TY+ LI+GLCK G L  A  LF++++ +G  P+  T + ++  LCK 
Sbjct: 398 DEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKG 457

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G++  A ++  D+  K    +  T+  ++ G  +     + + +L KM     +   ++ 
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTF 517

Query: 578 SSKVVDLLSKDK 589
              ++ L  KD+
Sbjct: 518 EIIIIALFKKDE 529



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 154/267 (57%), Gaps = 5/267 (1%)

Query: 95   KQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTF 154
            K Y T VSL  RL   G+ PDLF LN+LINC C MG  +  F +L +IL+  + P+T+TF
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 155  NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
              LINGLC +G++ +A     KL       N V++ TLING+C+  +T  A+KL  ++  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID- 1058

Query: 215  EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
              G + KPDVV YN+IID LCK   V KA  L  +M  + I+ +V+TYN+LI GFC V  
Sbjct: 1059 --GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGK 1116

Query: 275  WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK--MDKVNRLLELMIQRGVNPDTVTY 332
             KEA  L  +M+   + P+V T+N +++  CK+GK  +D+   +L  M   G   + VT+
Sbjct: 1117 LKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTF 1176

Query: 333  NSLMDGFCLVGRISRARELFVSMVSKG 359
              ++          +  +L   M+++G
Sbjct: 1177 EIIISALFEKDENDKVEKLLHEMIARG 1203



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 216/434 (49%), Gaps = 4/434 (0%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A   F ++      P ++ FN +++   + ++   A+ L   +  E   I +PD++T N
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL--ELKGI-QPDLITLN 98

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +I+  C  G +     +L ++  R   P+ +T N+LI G C     K+A     +++  
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G Q + V++  +IN  CK G      +LL+ +  R   P+ V Y++++D  C    +S A
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
             LF  M  KG   DV +Y+ LI   C + K+++A+ L  EM+ + I P+V TYN L+  
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G + +A  ++  M    V PD  T++T +DG      V +A  VF A+        
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + TY  LING CK   +  A  LF  +  K  +P +VT S++I  LCK G++    DL+ 
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +M  +    + +T+ +L+ G  +N    + + L +KM  + +  +  + +  ++D L K 
Sbjct: 399 EMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTI-LLDGLCKG 457

Query: 589 KKYRECLNQFRHLL 602
            + ++    F+ LL
Sbjct: 458 GRLKDAQEVFQDLL 471



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 137/251 (54%), Gaps = 2/251 (0%)

Query: 323  RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            +G+ PD  T N L++ FC +G+I+    +   ++ +G   D  ++  LIN  C   +V  
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 383  AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
            A+  + ++L++  + + ++Y TL++G+ ++G+   A+KL+ K+      PD   + T ID
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 443  GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
             LCK+  V +A  +F  +        + TYN LI G C +G+LK A  L +++  K   P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 503  DVVTCSTMIHWLCKEGQ--MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            +V T + ++  LCKEG+  +D++  +L  ME   C  + VTF  ++    + ++  KV  
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 561  LLHKMAAEKLV 571
            LLH+M A  L+
Sbjct: 1195 LLHEMIARGLL 1205



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 132/259 (50%), Gaps = 2/259 (0%)

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            A  L  +++ + I P++ T N LI  FC +        +  +++  G  PD +TF  +IN
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 303  YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              C  G+++K     + ++ +G   + V+Y +L++G C +G    A +L   +  +  + 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 363  DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            DV  YN +I+A CK Q V  A  L+ EM  + I   V+TYNTL+ G   VG L +A+ L+
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 423  DKMQLNDVVPDSFTFATYIDGLCKNGFVL--EAVQVFQAIRNCKCELRIETYNCLINGLC 480
            +KM L  + P+  T+   +D LCK G  L  E++ +   + +  C+    T+  +I+ L 
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 481  KMGRLKTACKLFHRLQHKG 499
            +        KL H +  +G
Sbjct: 1185 EKDENDKVEKLLHEMIARG 1203



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 133/258 (51%), Gaps = 5/258 (1%)

Query: 170  AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
            A  L  +L +    P++ T N LIN  C          +  +++        PD +T+ +
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRG---YHPDTITFTT 1001

Query: 230  IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
            +I+GLC  G V+KA     ++  +    N ++Y +LI G C + D + A  L  ++    
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061

Query: 290  VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             +PDVV +N +I+  CK   + K   L   M  +G++ D VTYN+L+ GFC+VG++  A 
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121

Query: 350  ELFVSMVSKGCRHDVYSYNILINANCKDQK--VEDAVCLYREMLSERIRPSVITYNTLLS 407
             L   MV K    +V +YNIL++A CK+ K  +++++ +  +M     + + +T+  ++S
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIIS 1181

Query: 408  GLFQVGNLGDALKLIDKM 425
             LF+        KL+ +M
Sbjct: 1182 ALFEKDENDKVEKLLHEM 1199



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 115/235 (48%), Gaps = 7/235 (2%)

Query: 58   GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
            G IT N ++     ++K    P   +FT L+  L    Q +  +    +L + G   +  
Sbjct: 975  GQITFNFSI--LAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQV 1032

Query: 118  VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
                LIN +CK+G T  A  +L +I      P+ V +N +I+ LC    + +A  LF ++
Sbjct: 1033 SYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEM 1092

Query: 178  NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
            NV     +VVT+NTLI G C       A+ L  +MV +      P+V TYN ++D LCK+
Sbjct: 1093 NVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLK---TINPNVRTYNILVDALCKE 1149

Query: 238  G--FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
            G   +D++  +L +M+D     N +T+  +I      D+  + + L  EM+  G+
Sbjct: 1150 GKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 1/208 (0%)

Query: 383  AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
            AV L   +  + I+P + T N L++    +G +     ++ K+      PD+ TF T I+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 443  GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
            GLC  G V +A+     +     +L   +Y  LING+CK+G  + A KL  ++  +   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 503  DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
            DVV  +T+I  LCK   + KA  L  +M  K      VT+ TL+ GF    K  + + LL
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 563  HKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            +KM   K +  ++   + +VD L K+ K
Sbjct: 1125 NKMVL-KTINPNVRTYNILVDALCKEGK 1151



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 36/224 (16%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           Q V+DAV  +  ML  R  P +I +N +L    ++ +   A+ L  +++L  + PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
                                              N LIN  C MG++     +  ++  
Sbjct: 98  -----------------------------------NILINCFCHMGQITFGFSVLAKILK 122

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +G  PD VT +T+I  LC +GQ+ KA      + A+    ++V++ TL+ G  +      
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRA 182

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            + LL K+   +L   ++ + S ++D L K +   E    F  +
Sbjct: 183 AIKLLQKIDG-RLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEM 225



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 2/106 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G++  + A+  F+ M      P   +FTILL  L K  +      +F+ L + G   +
Sbjct: 421 KNGHL--DRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN 478

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           ++  N++I+  CK G+   A  +L ++  +   P+ VTF  +I  L
Sbjct: 479 VYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 47/98 (47%)

Query: 482  MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            M    TA  L HRL+ KG  PD+ T + +I+  C  GQ+     +L  +  +   P  +T
Sbjct: 939  MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998

Query: 542  FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            F TL+ G     + +K +    K+ A+   ++ +S  +
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGT 1036


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 196/547 (35%), Positives = 304/547 (55%), Gaps = 34/547 (6%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I  ++AV  F  M + +P P +  F+ L +++A+ KQYD V+ L K++   
Sbjct: 42  ERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK 101

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  +L+ L+++INC C+    S AF  +G+I++  + P+TVTF+ LINGLC EGR+ EA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV------NE--FGAI--- 219
             L  ++      P ++T N L+NGLC       A+ L + MV      NE  +G +   
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221

Query: 220 -CKP--------------------DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            CK                     D V Y+ IIDGLCKDG +D A  L  +M+ +    +
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           +I Y +LI GFC    W +   L  +M+   + PDVV F+A+I+   K+GK+ +   L +
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MIQRG++PDTVTY SL+DGFC   ++ +A  +   MVSKGC  ++ ++NILIN  CK  
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++D + L+R+M    +    +TYNTL+ G  ++G L  A +L  +M    V PD  ++ 
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +DGLC NG   +A+++F+ I   K EL I  YN +I+G+C   ++  A  LF  L  K
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PDV T + MI  LCK+G + +A+ L   ME     P+  T+  L+R  +     +K 
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581

Query: 559 VVLLHKM 565
             L+ ++
Sbjct: 582 AKLIEEI 588



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 245/505 (48%), Gaps = 18/505 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV   D M++    P   ++  +L ++ K+ Q    + L +++    +  D    +++
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G    AF +   +    F  + + +  LI G C  GR  + A+L + +     
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VV F+ LI+   +      A +L +EM+        PD VTY S+IDG CK+  +DK
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG---ISPDTVTYTSLIDGFCKENQLDK 370

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +L  M  +   PN+ T+N LI G+C  +   +   LF +M   GV  D VT+N +I 
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ GK++    L + M+ R V PD V+Y  L+DG C  G   +A E+F  +       
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  YNI+I+  C   KV+DA  L+  +  + ++P V TYN ++ GL + G+L +A  L 
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            KM+ +   P+  T+   I      G   ++ ++ + I+ C   +   T           
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST----------- 599

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE--GQMDKANDLLLDMEAKNCVPSEV 540
             L+ A     R+   G  PDV T +T++   C E    +  A  L  +M+A    P+ V
Sbjct: 600 --LRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVV 657

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
           T+ T+++G +  N  S+V  +L +M
Sbjct: 658 TYNTVIKGLLNGNMISQVPGVLDQM 682



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 216/427 (50%), Gaps = 3/427 (0%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           RS   P  + F+ L + +    +      L K++ +     N+ T + +IN  CR R   
Sbjct: 65  RSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLS 124

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           +A     +++ + G   +PD VT++++I+GLC +G V +A EL+ +M +    P +IT N
Sbjct: 125 LAFSAMGKII-KLGY--EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +L+ G C      +A  L   M++ G QP+ VT+  ++   CK G+      LL  M +R
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            +  D V Y+ ++DG C  G +  A  LF  M  KG + D+  Y  LI   C   + +D 
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L R+M+  +I P V+ ++ L+    + G L +A +L  +M    + PD+ T+ + IDG
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK   + +A  +   + +  C   I T+N LING CK   +    +LF ++  +G + D
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            VT +T+I   C+ G+++ A +L  +M ++   P  V++  LL G   N +  K + +  
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481

Query: 564 KMAAEKL 570
           K+   K+
Sbjct: 482 KIEKSKM 488



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 191/375 (50%), Gaps = 3/375 (0%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A+ LF+EM     +  +P ++ ++ +   + +    D   +L  QM+ + I  N+ T + 
Sbjct: 56  AVDLFQEMTR---SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           +I   C       A     +++  G +PD VTF+ +IN  C +G++ +   L++ M++ G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             P  +T N+L++G CL G++S A  L   MV  G + +  +Y  ++   CK  +   A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L R+M   +I+   + Y+ ++ GL + G+L +A  L ++M++     D   + T I G 
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G   +  ++ + +   K    +  ++ LI+   K G+L+ A +L   +  +G  PD 
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           VT +++I   CKE Q+DKAN +L  M +K C P+  TF  L+ G+ + N     + L  K
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412

Query: 565 MAAEKLVVSDLSLSS 579
           M+   +V   ++ ++
Sbjct: 413 MSLRGVVADTVTYNT 427



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 164/331 (49%), Gaps = 7/331 (2%)

Query: 274 DWKE--AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
           D KE  A  LF EM  +  +P ++ F+ + +   +  + D V  L + M  +G+  +  T
Sbjct: 50  DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
            + +++  C   ++S A      ++  G   D  +++ LIN  C + +V +A+ L   M+
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
               +P++IT N L++GL   G + DA+ LID+M      P+  T+   +  +CK+G   
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
            A+++ + +   K +L    Y+ +I+GLCK G L  A  LF+ ++ KG   D++  +T+I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
              C  G+ D    LL DM  +   P  V F  L+  FV+  K  +    LHK   ++ +
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE-LHKEMIQRGI 348

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             D    + ++D   K+ +    L++  H+L
Sbjct: 349 SPDTVTYTSLIDGFCKENQ----LDKANHML 375



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 7/311 (2%)

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR---AREL 351
           V++   +     D K D    L + M +    P  + ++ L   F +V R  +     +L
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRL---FSVVARTKQYDLVLDL 94

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              M  KG  H++Y+ +I+IN  C+ +K+  A     +++     P  +T++TL++GL  
Sbjct: 95  CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCL 154

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G + +AL+L+D+M      P   T    ++GLC NG V +AV +   +     +    T
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y  ++  +CK G+   A +L  +++ +    D V  S +I  LCK+G +D A +L  +ME
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
            K      + + TL+RGF    +      LL  M   K +  D+   S ++D   K+ K 
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK-ITPDVVAFSALIDCFVKEGKL 333

Query: 592 RECLNQFRHLL 602
           RE     + ++
Sbjct: 334 REAEELHKEMI 344


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  344 bits (882), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 196/572 (34%), Positives = 315/572 (55%), Gaps = 42/572 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M+K +P P +  F  LL+ +AK K++D V+SL +++    +   L+  N+L
Sbjct: 29  DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 88

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM-------------- 168
           INC C+    S A  +LG++++  + P+ VT + L+NG C   RI               
Sbjct: 89  INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 148

Query: 169 ---------------------EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
                                EA  L  ++    C PN+VT+  ++NGLC+  +T +AL 
Sbjct: 149 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 208

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L  +M     A  + DVV +N+IID LCK   VD A  L  +M+ + I PNV+TY+SLI 
Sbjct: 209 LLNKME---AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 265

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
             C    W +A  L  +M++  + P++VTFNA+I+   K+GK  +  +L + MI+R ++P
Sbjct: 266 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 325

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  TYNSL++GFC+  R+ +A+++F  MVSK C  DV +YN LI   CK ++VED   L+
Sbjct: 326 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 385

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           REM    +    +TY TL+ GLF  G+  +A K+  +M  + V PD  T++  +DGLC N
Sbjct: 386 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 445

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + +A++VF  ++  + +L I  Y  +I G+CK G++     LF  L  KG  P+VVT 
Sbjct: 446 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 505

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +TMI  LC +  + +A  LL  M+    +P+  T+ TL+R  +++  K+    L+ +M +
Sbjct: 506 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 565

Query: 568 EKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
            +  V D S    V ++L     DK + + L+
Sbjct: 566 CRF-VGDASTIGLVANMLHDGRLDKSFLDMLS 596



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 220/403 (54%), Gaps = 3/403 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EAV   D M++    P + ++ +++  L K    D  ++L  ++ +  +  D+ + N 
Sbjct: 168 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 227

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+ LCK      A  +   +      PN VT++ LI+ LC+ GR  +A++L   +    
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 287

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +PN+VTFN LI+   +    + A KL+++M+        PD+ TYNS+++G C    +D
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS---IDPDIFTYNSLVNGFCMHDRLD 344

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KAK++   M  ++  P+V+TYN+LI GFC     ++   LF EM   G+  D VT+  +I
Sbjct: 345 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 404

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
                DG  D   ++ + M+  GV PD +TY+ L+DG C  G++ +A E+F  M     +
Sbjct: 405 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 464

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+Y Y  +I   CK  KV+D   L+  +  + ++P+V+TYNT++SGL     L +A  L
Sbjct: 465 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 524

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           + KM+ +  +P+S T+ T I    ++G    + ++ + +R+C+
Sbjct: 525 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 567



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 210/441 (47%), Gaps = 41/441 (9%)

Query: 200 RNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           RN L  +KL ++ +  FG + K    P +V +N ++  + K    D    L  +M+   I
Sbjct: 20  RNGLHDMKL-DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI 78

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
              + TYN LI  FC       A  L  +MM  G +P +VT ++++N  C   ++     
Sbjct: 79  VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 138

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR-------------- 361
           L++ M++ G  PDT+T+ +L+ G  L  + S A  L   MV +GC+              
Sbjct: 139 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 198

Query: 362 ---------------------HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                                 DV  +N +I++ CK + V+DA+ L++EM ++ IRP+V+
Sbjct: 199 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 258

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TY++L+S L   G   DA +L+  M    + P+  TF   ID   K G  +EA +++  +
Sbjct: 259 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 318

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                +  I TYN L+NG C   RL  A ++F  +  K   PDVVT +T+I   CK  ++
Sbjct: 319 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 378

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           +   +L  +M  +  V   VT+ TL++G   +        +  +M ++  V  D+   S 
Sbjct: 379 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSI 437

Query: 581 VVDLLSKDKKYRECLNQFRHL 601
           ++D L  + K  + L  F ++
Sbjct: 438 LLDGLCNNGKLEKALEVFDYM 458



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 141/298 (47%), Gaps = 1/298 (0%)

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  ++     D K+D    L   M++    P  V +N L+     + +      L   M 
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
                H +Y+YNILIN  C+  ++  A+ L  +M+     PS++T ++LL+G      + 
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           DA+ L+D+M      PD+ TF T I GL  +    EAV +   +    C+  + TY  ++
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           NGLCK G    A  L ++++      DVV  +T+I  LCK   +D A +L  +ME K   
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           P+ VT+ +L+       + S    LL  M  EK +  +L   + ++D   K+ K+ E 
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKEGKFVEA 311


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 196/572 (34%), Positives = 315/572 (55%), Gaps = 42/572 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M+K +P P +  F  LL+ +AK K++D V+SL +++    +   L+  N+L
Sbjct: 67  DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM-------------- 168
           INC C+    S A  +LG++++  + P+ VT + L+NG C   RI               
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186

Query: 169 ---------------------EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
                                EA  L  ++    C PN+VT+  ++NGLC+  +T +AL 
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L  +M     A  + DVV +N+IID LCK   VD A  L  +M+ + I PNV+TY+SLI 
Sbjct: 247 LLNKME---AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
             C    W +A  L  +M++  + P++VTFNA+I+   K+GK  +  +L + MI+R ++P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  TYNSL++GFC+  R+ +A+++F  MVSK C  DV +YN LI   CK ++VED   L+
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           REM    +    +TY TL+ GLF  G+  +A K+  +M  + V PD  T++  +DGLC N
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + +A++VF  ++  + +L I  Y  +I G+CK G++     LF  L  KG  P+VVT 
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +TMI  LC +  + +A  LL  M+    +P+  T+ TL+R  +++  K+    L+ +M +
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603

Query: 568 EKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
            +  V D S    V ++L     DK + + L+
Sbjct: 604 CRF-VGDASTIGLVANMLHDGRLDKSFLDMLS 634



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 220/403 (54%), Gaps = 3/403 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EAV   D M++    P + ++ +++  L K    D  ++L  ++ +  +  D+ + N 
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+ LCK      A  +   +      PN VT++ LI+ LC+ GR  +A++L   +    
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +PN+VTFN LI+   +    + A KL+++M+        PD+ TYNS+++G C    +D
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS---IDPDIFTYNSLVNGFCMHDRLD 382

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KAK++   M  ++  P+V+TYN+LI GFC     ++   LF EM   G+  D VT+  +I
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
                DG  D   ++ + M+  GV PD +TY+ L+DG C  G++ +A E+F  M     +
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+Y Y  +I   CK  KV+D   L+  +  + ++P+V+TYNT++SGL     L +A  L
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           + KM+ +  +P+S T+ T I    ++G    + ++ + +R+C+
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 210/441 (47%), Gaps = 41/441 (9%)

Query: 200 RNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           RN L  +KL ++ +  FG + K    P +V +N ++  + K    D    L  +M+   I
Sbjct: 58  RNGLHDMKL-DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI 116

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
              + TYN LI  FC       A  L  +MM  G +P +VT ++++N  C   ++     
Sbjct: 117 VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR-------------- 361
           L++ M++ G  PDT+T+ +L+ G  L  + S A  L   MV +GC+              
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236

Query: 362 ---------------------HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                                 DV  +N +I++ CK + V+DA+ L++EM ++ IRP+V+
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TY++L+S L   G   DA +L+  M    + P+  TF   ID   K G  +EA +++  +
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                +  I TYN L+NG C   RL  A ++F  +  K   PDVVT +T+I   CK  ++
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           +   +L  +M  +  V   VT+ TL++G   +        +  +M ++  V  D+   S 
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSI 475

Query: 581 VVDLLSKDKKYRECLNQFRHL 601
           ++D L  + K  + L  F ++
Sbjct: 476 LLDGLCNNGKLEKALEVFDYM 496



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 155/343 (45%), Gaps = 23/343 (6%)

Query: 256 NPNVITYNSLICGFCCVDDWKEA----KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           NP +   +  +CG C    W  A       + E++ NG+                D K+D
Sbjct: 26  NPRIAPSSIDLCGMCY---WGRAFSSGSGDYREILRNGLH---------------DMKLD 67

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               L   M++    P  V +N L+     + +      L   M      H +Y+YNILI
Sbjct: 68  DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N  C+  ++  A+ L  +M+     PS++T ++LL+G      + DA+ L+D+M      
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD+ TF T I GL  +    EAV +   +    C+  + TY  ++NGLCK G    A  L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            ++++      DVV  +T+I  LCK   +D A +L  +ME K   P+ VT+ +L+     
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
             + S    LL  M  EK +  +L   + ++D   K+ K+ E 
Sbjct: 308 YGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKEGKFVEA 349


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 191/528 (36%), Positives = 296/528 (56%), Gaps = 39/528 (7%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T +EA+  F+ M+  +P P    F  LLT +AK K + T++SL ++++S G+ PD++   
Sbjct: 25  TLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY--- 81

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
                                           T   +IN LC   R+  A     K+   
Sbjct: 82  --------------------------------TLAIVINSLCHLNRVDFAFSALAKILKL 109

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+  TF TLI GLC       AL LF++M+ E     +P+VVTY ++I+GLCKD  V
Sbjct: 110 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG---FQPNVVTYGTLINGLCKDRQV 166

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  +  +M  + I+PN++TYNSLI G C + +WK    L  EM+D+ + PDV T N +
Sbjct: 167 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 226

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+G + + + ++++MI RGV P+ VTYN+LMDG CL   +  A ++F +MV K C
Sbjct: 227 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 286

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V SYN LIN  CK Q V+ A+ L+ EM  + + P+ +TYNTL+ GL  VG L DA+ 
Sbjct: 287 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 346

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M     +PD  T+ T  D LCKN  + +A+ + +AI     +  I+ Y  +++G+C
Sbjct: 347 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 406

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G L+ A  LF  L  KG  P+V T + MIH LCK+G + +A+ L  +M    C P++ 
Sbjct: 407 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 466

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           T+  + RGF++NN+  + + LL +M A    V D+S ++ +V +LS D
Sbjct: 467 TYNLITRGFLRNNEALRTIELLEEMLARGFSV-DVSTTTLLVGMLSDD 513



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 144/400 (36%), Positives = 221/400 (55%), Gaps = 16/400 (4%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A     R+L     P+TV F  L+  +           L  +++ F   P+V T N LIN
Sbjct: 565 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 624

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             C  R    A  +  +++ + G   +PDVVTY ++++GLCK             M  + 
Sbjct: 625 SFCHLRRLGYAFSVLAKLL-KLGF--QPDVVTYGTLMNGLCK-------------MITKG 668

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           I+P++ TYNSLI   C + +WK    L  EM+++ + P+VV F+ +++  CK+G +   +
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            ++++MI+RGV PD VTY +LMDG CL   +  A ++F +MV KGC  +V SYNILIN  
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 788

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C+ Q+++ A+ L  +M  + +    +TYNTL+ GL  VG L  A+ L  +M  +  +PD 
Sbjct: 789 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 848

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   +D LCKN  + EA+ + +AI     +  I  YN  I+G+C+ G L+ A  LF  
Sbjct: 849 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSN 908

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L  KG  PDV T + MIH LCK G +D+AN L   M+  +
Sbjct: 909 LSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEND 948



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 256/554 (46%), Gaps = 62/554 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M+     P + ++  L   L KN+  D  ++L K +  +   PD+ +   +
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTI 401

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ +C+ G    A  +   +      PN  T+N +I+GLC +G + EA++LF ++N   C
Sbjct: 402 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 461

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN  T+N +  G  R    L  ++L EEM+    ++   DV T   ++  L  DG    
Sbjct: 462 SPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSV---DVSTTTLLVGMLSDDGLDQS 518

Query: 243 AKELL-----------LQMK-------------------------------DRNIN---- 256
            K++L            QM+                               +R ++    
Sbjct: 519 VKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPP 578

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+ + +  L+     +  +     L  +M   G+ PDV T N +IN  C   ++     +
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L  +++ G  PD VTY +LM+G C              M++KG   D+++YN LI+A C 
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCN 685

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             + +    L  EM++ +I P+V+ ++T++  L + G +  A  ++D M    V PD  T
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   +DG C    + EAV+VF  + +  C   + +YN LING C++ R+  A  L  ++ 
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 805

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +G I D VT +T+IH LC  G++  A  L  +M A   +P  VT+  LL    +N+  +
Sbjct: 806 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLA 865

Query: 557 KVVVLLHKMAAEKL 570
           + +VLL  +    L
Sbjct: 866 EAMVLLKAIEGSNL 879



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 204/396 (51%), Gaps = 25/396 (6%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T ++A+  F+ M+ M P P    FT LLT +AK K Y TV+SL  +++S G+ PD++ LN
Sbjct: 561 TLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN 620

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC------------------ 162
           +LIN  C +     AF VL ++L+  F P+ VT+  L+NGLC                  
Sbjct: 621 ILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLI 680

Query: 163 -AEGRIMEAARLFKKLNVFACD---PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
            A   + E   +   LN        PNVV F+T+++ LC+     +A  + + M+     
Sbjct: 681 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG-- 738

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
             +PDVVTY +++DG C    +D+A ++   M  +   PNV +YN LI G+C +    +A
Sbjct: 739 -VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 797

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             L  +M   G+  D VT+N +I+  C  G++     L   M+  G  PD VTY  L+D 
Sbjct: 798 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 857

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C    ++ A  L  ++       D+  YNI I+  C+  ++E A  L+  + S+ ++P 
Sbjct: 858 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 917

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           V TYN ++ GL + G L +A KL  KM  ND+  +S
Sbjct: 918 VRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNS 953



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 183/356 (51%), Gaps = 1/356 (0%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D+A     +M  +   P+ + +N L+              L  +M   G+ PDV T   
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +IN  C   ++D     L  +++ G  PD  T+ +L+ G C+ G+I  A  LF  M+ +G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + +V +Y  LIN  CKD++V +A  ++ EM+++ I P+++TYN+L+ GL ++       
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L+++M  + ++PD FT  T +D LCK G V EA  V   + +   E  + TYN L++G 
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C    +  A K+F  + HK  + +V++ +T+I+  CK   +DKA  L  +M  +   P+ 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
           VT+ TL+ G     +    + L H+M A    + DL     + D L K++   + +
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARG-QIPDLVTYRTLSDYLCKNRHLDKAM 380



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 241/535 (45%), Gaps = 37/535 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+Y F+ M + + +P   ++  L+  L    +    +SLF  + + G  PDL     L
Sbjct: 307 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 366

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            + LCK      A  +L  I  S + P+   +  +++G+C  G + +A  LF  L+    
Sbjct: 367 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 426

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV T+N +I+GLC+      A KLF EM N+ G  C P+  TYN I  G  ++    +
Sbjct: 427 QPNVWTYNIMIHGLCKQGLLAEASKLFSEM-NKNG--CSPNDCTYNLITRGFLRNNEALR 483

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI- 301
             ELL +M  R  + +V T  +L+ G    D   ++    +    +  +P      ++  
Sbjct: 484 TIELLEEMLARGFSVDVST-TTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPP 542

Query: 302 ---------------NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
                          ++N  D  +   NR+L +       P TV +  L+     +   S
Sbjct: 543 LFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPP----PSTVDFTKLLTSIAKMKHYS 598

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
               L   M S G   DVY+ NILIN+ C  +++  A  +  ++L    +P V+TY TL+
Sbjct: 599 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLM 658

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           +GL              KM    + PD FT+ + I  LC          +   + N K  
Sbjct: 659 NGLC-------------KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 705

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             +  ++ +++ LCK G +  A  +   +  +G  PDVVT + ++   C   +MD+A  +
Sbjct: 706 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 765

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
              M  K CVP+  ++  L+ G+ Q  +  K + LL +M+ + L+   ++ ++ +
Sbjct: 766 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 820


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  342 bits (878), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 198/564 (35%), Positives = 307/564 (54%), Gaps = 11/564 (1%)

Query: 35  DLSSHHFKDGTSIAKFLNDRHKSGNITS-NEAVYFFDCMIKMKPSPGMTSFTILLTMLAK 93
           D  SH   +GT     + +  KSG + + +EA+  F  M  MKP P +  FT+LL ++ +
Sbjct: 31  DTDSH--SNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVR 88

Query: 94  NKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
            K Y T +SL K + S+ G+  D   LN++INCLC++ + +  F VLG + +    P  +
Sbjct: 89  LKHYTTAISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVM 148

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T   LINGLC +G + +A  L   +       +V T+  LINGLC+T +TL A++   +M
Sbjct: 149 TLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKM 208

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                   KP+VV Y++I+DGLCKDG V +A  L  +M  + + PN++TY  LI G C  
Sbjct: 209 EERN---WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNF 265

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
             WKE   L  EM+  G++ D+ T N +++  CK+GK+ +   ++  MI  G  PD  TY
Sbjct: 266 GRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTY 325

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           NSL+  +CL  +++ A  +F  MVS+GC  D+  +  LI+  CKD+ +   + L  EM  
Sbjct: 326 NSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAK 385

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
               P V+T+ TL+ G  Q G    A +L   M     VP+  T A  +DGLCK   + E
Sbjct: 386 MGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSE 445

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           AV + +A+     +L I  Y+ L++G+C  G+L  A +LF  L  KG   +V T + MI 
Sbjct: 446 AVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIK 505

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            LCK+G +DKA DLL++ME   C+P   T+   ++G +   + ++ +  L  M  +   V
Sbjct: 506 GLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSV 565

Query: 573 SDLSLSSKVVDLLSK---DKKYRE 593
            D + +   ++ LS    D + RE
Sbjct: 566 -DAATTEITINYLSTNEGDTRIRE 588


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 193/524 (36%), Positives = 296/524 (56%), Gaps = 3/524 (0%)

Query: 48  AKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL 107
           A   +  H + +   N+AV  F+ M+ M+P P    F  +L+ L K +++ T +SL K L
Sbjct: 36  AMLHSQSHYNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHL 95

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
           +  G+  DL  LN+LINC C +G  + +F VL  IL+  + P+ +T   LI GLC  G +
Sbjct: 96  DFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEV 155

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            +A +    +       + +++ TLINGLC+   T  A++L   +  E  +I KPDVV Y
Sbjct: 156 KKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNL--EERSI-KPDVVMY 212

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N IID LCK+  V +A  L  +M  + I PNV+TY +LI GFC +    EA  L  EM  
Sbjct: 213 NIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKL 272

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
             + PDV TF+ +I+   K+GKM     +L +M++  V PD VTYNSL+DG+ LV  +  
Sbjct: 273 KNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKH 332

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A+ +F SM   G    V SY I+I+  CK + V++A+ L+ EM  + + P+ IT+N+L+ 
Sbjct: 333 AKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLID 392

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GL + G +     L+DKM+    + D  T+++ ID LCKN  + +A+ +F+ +   + + 
Sbjct: 393 GLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQP 452

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + TY  LI+GLCK GRLK A ++F  L  KG   D+ T + MI   CK G  D+A  LL
Sbjct: 453 DMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALL 512

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             ME   C+P+ +TF  ++    + ++  K   LL +M A  L+
Sbjct: 513 SKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 202/381 (53%), Gaps = 1/381 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P    +N+I+  L K      A  L   +  + I  +++T N LI  FC +     +  +
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              ++  G  PDV+T   +I   C  G++ K  +  + ++      D ++Y +L++G C 
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           +G    A +L  ++  +  + DV  YNI+I++ CK++ V +A  LY EM +++I P+V+T
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y TL+ G   +G L +A+ L+++M+L ++ PD +TF+  ID L K G +  A  V   + 
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +  + TYN L++G   +  +K A  +F+ +   G  P V + + MI  LCK   +D
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A  L  +M+ KN +P+ +TF +L+ G  ++ + + V  L+ KM  ++  ++D+   S +
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKM-RDRSQLADVITYSSL 425

Query: 582 VDLLSKDKKYRECLNQFRHLL 602
           +D L K+    + +  F+ ++
Sbjct: 426 IDALCKNCHLDQAIALFKKMI 446


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  342 bits (876), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 186/508 (36%), Positives = 304/508 (59%), Gaps = 3/508 (0%)

Query: 63  NEAVYFFDCMIKMK-PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++AV  F+ ++ M   +P +  F  +L+ L K   +   +S  +++   G+ P++F  N+
Sbjct: 34  DDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNI 93

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LINC   +   + AF ++ +IL+  + P+TVT N L+ GLC  G++ EA      +    
Sbjct: 94  LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              + V++ TLINGLC++  T  AL+L  ++  E   + +PDV+ Y +IID  CKD  V 
Sbjct: 154 FHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVI 211

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A +L  +M  + I PNV+T+NSLI GFC V   KEA  L  EM  N V P+V TFN +I
Sbjct: 212 DAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILI 271

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK+G++ K   +L +MI++GV P+ VTY SLMDG+ LV  +++A+ +F ++  +G  
Sbjct: 272 DGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVT 331

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +V+SY+++IN  CK++ V++AV L++EM  + + P+ +TY++L+ GL + G + D   L
Sbjct: 332 PNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDL 391

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ID++       +  T+ + ++GLCKN  V +A+ +   +++   +  + TY  L++GLCK
Sbjct: 392 IDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCK 451

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            GRLK A +++  L  KG   ++   + MI+ LCKEG  D+A  LL  ME   C+P  VT
Sbjct: 452 NGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVT 511

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           + TL+    +NNK  K V LL +M A +
Sbjct: 512 YETLISALFKNNKNGKAVKLLREMIARE 539



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 180/420 (42%), Gaps = 72/420 (17%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
           N  P +  +N ++     ++ +K A     +M   G+QP++ TFN +IN      +++  
Sbjct: 48  NHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFA 107

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             ++  +++ G  PDTVT N+L+ G CL G++  A      ++ K    D  SY  LIN 
Sbjct: 108 FSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLING 167

Query: 374 NCKDQKVEDAVCLYREMLSER-IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
            CK  +   A+ L R++     +RP VI Y  ++    +   + DA  L  +M +  + P
Sbjct: 168 LCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYP 227

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK-- 490
           +  TF + I G C  G + EAV +   +        + T+N LI+GLCK G +K A    
Sbjct: 228 NVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVL 287

Query: 491 ---------------------------------LFHRLQHKGPIPDVVTCSTMIHWLCKE 517
                                            +F+ +  +G  P+V + S MI+ LCK 
Sbjct: 288 SVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKN 347

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFC---------------------------------- 543
             +D+A  L  +M  KN  P+ VT+                                   
Sbjct: 348 KMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITY 407

Query: 544 -TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +LL G  +N++  K + LL KM  E  +  D+S  + +VD L K+ + ++    ++ LL
Sbjct: 408 NSLLNGLCKNHQVDKAIALLTKMKDEG-IQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLL 466



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 162/358 (45%), Gaps = 64/358 (17%)

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           FI+ +D+ V     +FN +++ N     + + N++L  +++             M+ F +
Sbjct: 29  FIDNLDDAVS----SFNHILHMNNHTPPIFEFNKILSSLVK-------------MNHFKI 71

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
               S+  EL      KG + +++++NILIN      ++  A  +  ++L    +P  +T
Sbjct: 72  AISFSQQMEL------KGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVT 125

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
            NTLL GL   G + +AL   D +       D  ++ T I+GLCK+G    A+Q+ + I 
Sbjct: 126 VNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIE 185

Query: 462 N------------------CKCELRIE------------------TYNCLINGLCKMGRL 485
                              CK +L I+                  T+N LI G C +G+L
Sbjct: 186 GLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQL 245

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           K A  L + +      P+V T + +I  LCKEG++ KA  +L  M  +   P+ VT+ +L
Sbjct: 246 KEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSL 305

Query: 546 LRGF--VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + G+  V+   K+K V       + + V  ++   S +++ L K+K   E +  F+ +
Sbjct: 306 MDGYFLVKEVNKAKHVF---NTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEM 360


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 185/554 (33%), Positives = 304/554 (54%), Gaps = 48/554 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M++ +P P +  F  L+  + + ++ D V+SL++++    +  D++   +L
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I C C       A    G++ +    P+ VTF  L++GLC + R+ EA  LF ++    C
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAIC-------------- 220
            P+V+TF TL+NGLCR    + A+ L + MV          +G                 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 221 -----------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                      KP+VV Y++IIDGLCKDG    +  L ++M+D+ I PN++TYN +I GF
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W  A+ L  EM++  + P+VVT+NA+IN   K+GK  +   L + M+ RG+ P+T
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TYNS++DGFC   R+  A ++F  M +KGC  DV+++  LI+  C  ++++D + L  E
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +  + +TYNTL+ G   VG+L  AL L  +M  + V PD  T  T +DGLC NG 
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478

Query: 450 VLEAVQVFQAIRNCKCEL-----------RIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +A+++F+A++  K +L            + TYN LI GL   G+   A +L+  + H+
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +T S+MI  LCK+ ++D+A  + + M +K+  P+ VTF TL+ G+ +  +    
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598

Query: 559 VVLLHKMAAEKLVV 572
           + L  +M    +V 
Sbjct: 599 LELFCEMGRRGIVA 612



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 168/504 (33%), Positives = 271/504 (53%), Gaps = 15/504 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +FT L+  L +  +    V+L  R+  NGL PD       ++ +CKMG T  A  +
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 139 LGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           L ++   S   PN V ++ +I+GLC +GR  ++  LF ++      PN+VT+N +I G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            +     A +L +EM+        P+VVTYN++I+   K+G   +A EL  +M  R I P
Sbjct: 300 ISGRWSAAQRLLQEMLER---KISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N ITYNS+I GFC  D    A+ +F  M   G  PDV TF  +I+  C   ++D    LL
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M +RG+  +TVTYN+L+ GFCLVG ++ A +L   M+S G   D+ + N L++  C +
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 378 QKVEDAVCLYREMLSER-----------IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
            K++DA+ +++ M   +           + P V+TYN L+ GL   G   +A +L ++M 
Sbjct: 477 GKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMP 536

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              +VPD+ T+++ IDGLCK   + EA Q+F ++ +      + T+N LING CK GR+ 
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
              +LF  +  +G + D +   T+I+   K G ++ A D+  +M +    P  +T   +L
Sbjct: 597 DGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKL 570
            GF    +  + V +L  +   +L
Sbjct: 657 TGFWSKEELERAVAMLEDLQRYQL 680



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 209/434 (48%), Gaps = 49/434 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ ++  L K+ ++    +LF  +   G+FP++   N +I   C  G  S A  +
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +L    +PN VT+N LIN    EG+  EAA L+ ++      PN +T+N++I+G C+
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +F  M  +    C PDV T+ ++IDG C    +D   ELL +M  R +  N
Sbjct: 371 QDRLDAAEDMFYLMATKG---CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMD------------------------------- 287
            +TYN+LI GFC V D   A  L  +M+                                
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 288 ---------------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                          NGV+PDV+T+N +I     +GK  +   L E M  RG+ PDT+TY
Sbjct: 488 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           +S++DG C   R+  A ++FVSM SK    +V ++N LIN  CK  +V+D + L+ EM  
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I    I Y TL+ G  +VGN+  AL +  +M  + V PD+ T    + G      +  
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 667

Query: 453 AVQVFQAIRNCKCE 466
           AV + + ++  + E
Sbjct: 668 AVAMLEDLQRYQLE 681



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 190/389 (48%), Gaps = 9/389 (2%)

Query: 198 RTRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           + R+    +K  E+ ++ F  + +    P V+ +N ++  + +    D    L  +M+ +
Sbjct: 51  KLRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERK 110

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I  ++ ++  LI  FC       A   F ++   G+ PDVVTF  +++  C D    +V
Sbjct: 111 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLD---HRV 167

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           +  L+L  Q    PD +T+ +LM+G C  GR+  A  L   MV  G + D  +Y   ++ 
Sbjct: 168 SEALDLFHQI-CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDG 226

Query: 374 NCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
            CK      A+ L R+M     I+P+V+ Y+ ++ GL + G   D+  L  +MQ   + P
Sbjct: 227 MCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP 286

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           +  T+   I G C +G    A ++ Q +   K    + TYN LIN   K G+   A +L+
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +  +G IP+ +T ++MI   CK+ ++D A D+   M  K C P   TF TL+ G+   
Sbjct: 347 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 406

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            +    + LLH+M    LV + ++ ++ +
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLI 435



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 167/336 (49%), Gaps = 10/336 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   +D M+     P   ++  ++    K  + D    +F  + + G  PD+F    LI
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C          +L  + R     NTVT+N LI+G C  G +  A  L +++      
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 460

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEM---------VNEFGAICKPDVVTYNSIIDGL 234
           P++VT NTL++GLC       AL++F+ M          + F  + +PDV+TYN +I GL
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV-EPDVLTYNILICGL 519

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
             +G   +A+EL  +M  R I P+ ITY+S+I G C      EA  +F+ M      P+V
Sbjct: 520 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 579

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           VTFN +IN  CK G++D    L   M +RG+  D + Y +L+ GF  VG I+ A ++F  
Sbjct: 580 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQE 639

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           M+S G   D  +   ++      +++E AV +  ++
Sbjct: 640 MISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 164/315 (52%), Gaps = 5/315 (1%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           ++A  LF +M+ +   P V+ FN ++    +  + D V  L + M ++ +  D  ++  L
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +  FC   ++  A   F  +   G   DV ++  L++  C D +V +A+ L+ ++     
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
           RP V+T+ TL++GL + G + +A+ L+D+M  N + PD  T+ T++DG+CK G  + A+ 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 456 VFQAIRN-CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           + + +      +  +  Y+ +I+GLCK GR   +  LF  +Q KG  P++VT + MI   
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C  G+   A  LL +M  +   P+ VT+  L+  FV+  K  +   L  +M    ++ + 
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358

Query: 575 LSLSSKVVDLLSKDK 589
           ++ +S +     +D+
Sbjct: 359 ITYNSMIDGFCKQDR 373



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 4/221 (1%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + +EDA+ L+ +ML  R  PSVI +N L+  + ++      + L  KM+   +  D ++F
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I   C    +  A+  F  +        + T+  L++GLC   R+  A  LFH++  
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR 179

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
               PDV+T +T+++ LC+EG++ +A  LL  M      P ++T+ T + G  +      
Sbjct: 180 ----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            + LL KM     +  ++ + S ++D L KD ++ +  N F
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLF 276



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 51/118 (43%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M     SP + +F  L+    K  + D  + LF  +   G+  D  +   L
Sbjct: 561 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 620

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           I    K+G  +GA  +   ++ S   P+T+T   ++ G  ++  +  A  + + L  +
Sbjct: 621 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRY 678


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  341 bits (875), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 185/554 (33%), Positives = 304/554 (54%), Gaps = 48/554 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M++ +P P +  F  L+  + + ++ D V+SL++++    +  D++   +L
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I C C       A    G++ +    P+ VTF  L++GLC + R+ EA  LF ++    C
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAIC-------------- 220
            P+V+TF TL+NGLCR    + A+ L + MV          +G                 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 221 -----------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                      KP+VV Y++IIDGLCKDG    +  L ++M+D+ I PN++TYN +I GF
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W  A+ L  EM++  + P+VVT+NA+IN   K+GK  +   L + M+ RG+ P+T
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TYNS++DGFC   R+  A ++F  M +KGC  DV+++  LI+  C  ++++D + L  E
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +  + +TYNTL+ G   VG+L  AL L  +M  + V PD  T  T +DGLC NG 
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478

Query: 450 VLEAVQVFQAIRNCKCEL-----------RIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +A+++F+A++  K +L            + TYN LI GL   G+   A +L+  + H+
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +T S+MI  LCK+ ++D+A  + + M +K+  P+ VTF TL+ G+ +  +    
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598

Query: 559 VVLLHKMAAEKLVV 572
           + L  +M    +V 
Sbjct: 599 LELFCEMGRRGIVA 612



 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 167/499 (33%), Positives = 269/499 (53%), Gaps = 15/499 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +FT L+  L +  +    V+L  R+  NGL PD       ++ +CKMG T  A  +
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 139 LGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           L ++   S   PN V ++ +I+GLC +GR  ++  LF ++      PN+VT+N +I G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            +     A +L +EM+        P+VVTYN++I+   K+G   +A EL  +M  R I P
Sbjct: 300 ISGRWSAAQRLLQEMLER---KISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N ITYNS+I GFC  D    A+ +F  M   G  PDV TF  +I+  C   ++D    LL
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M +RG+  +TVTYN+L+ GFCLVG ++ A +L   M+S G   D+ + N L++  C +
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 378 QKVEDAVCLYREMLSER-----------IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
            K++DA+ +++ M   +           + P V+TYN L+ GL   G   +A +L ++M 
Sbjct: 477 GKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMP 536

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              +VPD+ T+++ IDGLCK   + EA Q+F ++ +      + T+N LING CK GR+ 
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
              +LF  +  +G + D +   T+I+   K G ++ A D+  +M +    P  +T   +L
Sbjct: 597 DGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656

Query: 547 RGFVQNNKKSKVVVLLHKM 565
            GF    +  + V +L  +
Sbjct: 657 TGFWSKEELERAVAMLEDL 675



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 207/429 (48%), Gaps = 49/429 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ ++  L K+ ++    +LF  +   G+FP++   N +I   C  G  S A  +
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +L    +PN VT+N LIN    EG+  EAA L+ ++      PN +T+N++I+G C+
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +F  M  +    C PDV T+ ++IDG C    +D   ELL +M  R +  N
Sbjct: 371 QDRLDAAEDMFYLMATKG---CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMD------------------------------- 287
            +TYN+LI GFC V D   A  L  +M+                                
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 288 ---------------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                          NGV+PDV+T+N +I     +GK  +   L E M  RG+ PDT+TY
Sbjct: 488 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           +S++DG C   R+  A ++FVSM SK    +V ++N LIN  CK  +V+D + L+ EM  
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I    I Y TL+ G  +VGN+  AL +  +M  + V PD+ T    + G      +  
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 667

Query: 453 AVQVFQAIR 461
           AV + + ++
Sbjct: 668 AVAMLEDLQ 676



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 188/368 (51%), Gaps = 14/368 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++ K SP + ++  L+    K  ++     L+  +   G+ P+    N +I+  CK   
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   +     +P+  TF  LI+G C   RI +   L  ++       N VT+NT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+G C   +   AL L ++M++    +C PD+VT N+++DGLC +G +  A E+   M+
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISS--GVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 252 DR-----------NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
                         + P+V+TYN LICG      + EA+ L+ EM   G+ PD +T+++M
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  CK  ++D+  ++   M  +  +P+ VT+N+L++G+C  GR+    ELF  M  +G 
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D   Y  LI    K   +  A+ +++EM+S  + P  IT   +L+G +    L  A+ 
Sbjct: 611 VADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVA 670

Query: 421 LIDKMQLN 428
           +++ +Q++
Sbjct: 671 MLEDLQMS 678



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 190/389 (48%), Gaps = 9/389 (2%)

Query: 198 RTRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           + R+    +K  E+ ++ F  + +    P V+ +N ++  + +    D    L  +M+ +
Sbjct: 51  KLRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERK 110

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I  ++ ++  LI  FC       A   F ++   G+ PDVVTF  +++  C D    +V
Sbjct: 111 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLD---HRV 167

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           +  L+L  Q    PD +T+ +LM+G C  GR+  A  L   MV  G + D  +Y   ++ 
Sbjct: 168 SEALDLFHQI-CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDG 226

Query: 374 NCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
            CK      A+ L R+M     I+P+V+ Y+ ++ GL + G   D+  L  +MQ   + P
Sbjct: 227 MCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP 286

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           +  T+   I G C +G    A ++ Q +   K    + TYN LIN   K G+   A +L+
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +  +G IP+ +T ++MI   CK+ ++D A D+   M  K C P   TF TL+ G+   
Sbjct: 347 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 406

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            +    + LLH+M    LV + ++ ++ +
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLI 435



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 167/336 (49%), Gaps = 10/336 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   +D M+     P   ++  ++    K  + D    +F  + + G  PD+F    LI
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C          +L  + R     NTVT+N LI+G C  G +  A  L +++      
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 460

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEM---------VNEFGAICKPDVVTYNSIIDGL 234
           P++VT NTL++GLC       AL++F+ M          + F  + +PDV+TYN +I GL
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV-EPDVLTYNILICGL 519

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
             +G   +A+EL  +M  R I P+ ITY+S+I G C      EA  +F+ M      P+V
Sbjct: 520 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 579

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           VTFN +IN  CK G++D    L   M +RG+  D + Y +L+ GF  VG I+ A ++F  
Sbjct: 580 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQE 639

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           M+S G   D  +   ++      +++E AV +  ++
Sbjct: 640 MISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 164/315 (52%), Gaps = 5/315 (1%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           ++A  LF +M+ +   P V+ FN ++    +  + D V  L + M ++ +  D  ++  L
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +  FC   ++  A   F  +   G   DV ++  L++  C D +V +A+ L+ ++     
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
           RP V+T+ TL++GL + G + +A+ L+D+M  N + PD  T+ T++DG+CK G  + A+ 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 456 VFQAIRN-CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           + + +      +  +  Y+ +I+GLCK GR   +  LF  +Q KG  P++VT + MI   
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C  G+   A  LL +M  +   P+ VT+  L+  FV+  K  +   L  +M    ++ + 
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358

Query: 575 LSLSSKVVDLLSKDK 589
           ++ +S +     +D+
Sbjct: 359 ITYNSMIDGFCKQDR 373



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 4/221 (1%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + +EDA+ L+ +ML  R  PSVI +N L+  + ++      + L  KM+   +  D ++F
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I   C    +  A+  F  +        + T+  L++GLC   R+  A  LFH++  
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR 179

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
               PDV+T +T+++ LC+EG++ +A  LL  M      P ++T+ T + G  +      
Sbjct: 180 ----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            + LL KM     +  ++ + S ++D L KD ++ +  N F
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLF 276



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/154 (20%), Positives = 60/154 (38%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   ++ M      P   +++ ++  L K  + D    +F  + S    P++   N LI
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  CK G       +   + R     + + +  LI G    G I  A  +F+++      
Sbjct: 587 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 646

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           P+ +T   ++ G         A+ + E++    G
Sbjct: 647 PDTITIRNMLTGFWSKEELERAVAMLEDLQMSVG 680



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 51/117 (43%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M     SP + +F  L+    K  + D  + LF  +   G+  D  +   L
Sbjct: 561 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 620

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           I    K+G  +GA  +   ++ S   P+T+T   ++ G  ++  +  A  + + L +
Sbjct: 621 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 677


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 191/509 (37%), Positives = 297/509 (58%), Gaps = 4/509 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  MI +   P +  F  +L   AK K Y T VSL  RL   G+ PDLF LN+L
Sbjct: 290 DKALNLFKEMI-LSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNIL 348

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C MG  +  F VL +IL+  + P+TVT N LI GLC +G++ +A     KL     
Sbjct: 349 INCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 408

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V++ TLING+C+  +T  A+KL  ++    G + KP+V  Y++IID LCK   V +
Sbjct: 409 QLNQVSYATLINGVCKIGDTRGAIKLLRKID---GRLTKPNVEMYSTIIDALCKYQLVSE 465

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +M  + I+ +V+TY++LI GFC V   KEA  L  EM+   + PDV T+  +++
Sbjct: 466 AYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVD 525

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+GK+ +   +L +M++  V PD  TYN+LM+G+ LV  + +A+ +F +M   G   
Sbjct: 526 ALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTP 585

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV++Y ILIN  CK + V++A+ L++EM  + + P  +TY++L+ GL + G +     LI
Sbjct: 586 DVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLI 645

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M+      D  T+ + IDGLCKNG + +A+ +F  +++        T+  L++GLCK 
Sbjct: 646 DEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKG 705

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GRLK A ++F  L  KG   DV   + MI+  CK+G +++A  +L  ME   C+P+ VTF
Sbjct: 706 GRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTF 765

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             ++    + ++  K   LL +M A  L+
Sbjct: 766 DIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 163/492 (33%), Positives = 259/492 (52%), Gaps = 40/492 (8%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VL +IL+  + P+TVT N LI GLC +G++ EA     KL       N V++ TLING+C
Sbjct: 50  VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  +T  A+K   ++    G + KP+V  YN+IID LCK   V +A  L  +M  + I+ 
Sbjct: 110 RIGDTRAAIKFLRKID---GRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV+TY++LI GFC V   KEA  L   M+   + P+V T+N +++  CK+GK+ +   +L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
            +M++  V  + +TY++LMDG+ LV  + +A+ +F +M   G   DV+SYNI+IN  CK 
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF-- 435
           ++V+ A+ L++EM+  R  P +I +N +L    ++ +   A+ L  +++L  + PD F  
Sbjct: 287 KRVDKALNLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTL 345

Query: 436 ---------------------------------TFATYIDGLCKNGFVLEAVQVFQAIRN 462
                                            T  T I GLC  G V +A+     +  
Sbjct: 346 NILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLA 405

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              +L   +Y  LING+CK+G  + A KL  ++  +   P+V   ST+I  LCK   + +
Sbjct: 406 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 465

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A  L  +M  K      VT+ TL+ GF    K  + + LL++M   K +  D+   + +V
Sbjct: 466 AYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVL-KTINPDVRTYTILV 524

Query: 583 DLLSKDKKYREC 594
           D L K+ K +E 
Sbjct: 525 DALGKEGKVKEA 536



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 242/507 (47%), Gaps = 66/507 (13%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P++   N+L++ LCK G    A  VL  +L++C   N +T++ L++G      + +A  +
Sbjct: 201 PNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHV 260

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAI------------- 219
           F  +++    P+V ++N +ING C+ +    AL LF+EM+ + F  I             
Sbjct: 261 FNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKM 320

Query: 220 -----------------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
                             +PD+ T N +I+  C  G +     +L ++  R   P+ +T 
Sbjct: 321 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTL 380

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK--------------DG 308
           N+LI G C     K+A     +++  G Q + V++  +IN  CK              DG
Sbjct: 381 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDG 440

Query: 309 KMDKVN---------------------RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           ++ K N                      L   M  +G++ D VTY++L+ GFC+VG++  
Sbjct: 441 RLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKE 500

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A  L   MV K    DV +Y IL++A  K+ KV++A  +   ML   ++P V TYNTL++
Sbjct: 501 AIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMN 560

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G   V  +  A  + + M L  V PD  T+   I+G CK+  V EA+ +F+ +       
Sbjct: 561 GYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVP 620

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
              TY+ L++GLCK GR+     L   ++ +G   DV+T +++I  LCK G +DKA  L 
Sbjct: 621 DTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALF 680

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             M+ +   P+  TF  LL G  +  +
Sbjct: 681 NKMKDQGIRPNTFTFTILLDGLCKGGR 707



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 156/571 (27%), Positives = 266/571 (46%), Gaps = 72/571 (12%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA++F D ++         S+  L+  + +       +   ++++     P++ + N +I
Sbjct: 81  EALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTII 140

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK  + S A+ +   +     + N VT++ LI G C  G++ EA  L   + +   +
Sbjct: 141 DALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTIN 200

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNV T+N L++ LC+      A  +   M+    A  K +V+TY++++DG      V KA
Sbjct: 201 PNVCTYNILVDALCKEGKVKEAKSVLAVMLK---ACVKSNVITYSTLMDGYFLVYEVKKA 257

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN--------------- 288
           + +   M    + P+V +YN +I GFC +    +A  LF EM+ +               
Sbjct: 258 QHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSF 317

Query: 289 -------------------GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
                              G+QPD+ T N +IN  C  G++     +L  +++RG  P T
Sbjct: 318 AKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPST 377

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN----------------- 372
           VT N+L+ G CL G++ +A      ++++G + +  SY  LIN                 
Sbjct: 378 VTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRK 437

Query: 373 ------------------ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
                             A CK Q V +A  L+ EM  + I   V+TY+TL+ G   VG 
Sbjct: 438 IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGK 497

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +A+ L+++M L  + PD  T+   +D L K G V EA  V   +     +  + TYN 
Sbjct: 498 LKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNT 557

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L+NG   +  +K A  +F+ +   G  PDV T + +I+  CK   +D+A +L  +M  KN
Sbjct: 558 LMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKN 617

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            VP  VT+ +L+ G  ++ + S V  L+ +M
Sbjct: 618 MVPDTVTYSSLVDGLCKSGRISYVWDLIDEM 648



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 156/496 (31%), Positives = 246/496 (49%), Gaps = 10/496 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           ++K    P   +   L+  L    Q    +    +L + G   +      LIN +C++G 
Sbjct: 54  ILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGD 113

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T  A   L +I      PN   +N +I+ LC    + EA  LF ++ V     NVVT++T
Sbjct: 114 TRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYST 173

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI G C       AL L   MV +      P+V TYN ++D LCK+G V +AK +L  M 
Sbjct: 174 LIYGFCIVGKLKEALGLLNVMVLK---TINPNVCTYNILVDALCKEGKVKEAKSVLAVML 230

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              +  NVITY++L+ G+  V + K+A+ +F  M   GV PDV ++N MIN  CK  ++D
Sbjct: 231 KACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVD 290

Query: 312 K-VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           K +N   E+++ R   P  + +N ++D F  +   S A  L   +  KG + D+++ NIL
Sbjct: 291 KALNLFKEMILSR--FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNIL 348

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           IN  C   ++     +  ++L     PS +T NTL+ GL   G +  AL   DK+     
Sbjct: 349 INCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 408

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
             +  ++AT I+G+CK G    A+++ + I     +  +E Y+ +I+ LCK   +  A  
Sbjct: 409 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 468

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           LF  +  KG   DVVT ST+I+  C  G++ +A  LL +M  K   P   T+  L+    
Sbjct: 469 LFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALG 528

Query: 551 QNNK----KSKVVVLL 562
           +  K    KS + V+L
Sbjct: 529 KEGKVKEAKSVLAVML 544



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 3/185 (1%)

Query: 412 VGNLGDALKL--IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
           + N+ DA+ L  + K+      PD+ T  T I GLC  G V EA+     +     +L  
Sbjct: 39  IQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQ 98

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            +Y  LING+C++G  + A K   ++  +   P+V   +T+I  LCK   + +A  L  +
Sbjct: 99  VSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSE 158

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           M  K    + VT+ TL+ GF    K  + + LL+ M   K +  ++   + +VD L K+ 
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVL-KTINPNVCTYNILVDALCKEG 217

Query: 590 KYREC 594
           K +E 
Sbjct: 218 KVKEA 222


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  340 bits (873), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 179/439 (40%), Positives = 267/439 (60%), Gaps = 3/439 (0%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T ++A+  F+ M+ M P P    FT LLT +AK K Y TV+SL  +++S G+ PD++ LN
Sbjct: 92  TLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN 151

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +LIN  C +     AF VL ++L+    P+  TFN LI GLC EG+I EA  LF K    
Sbjct: 152 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 211

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+VVT+ TL+NGLC+  NT  A++L   MV +    C+P+V+ YN+IID LCKD  V
Sbjct: 212 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN---CRPNVIAYNTIIDSLCKDRQV 268

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  L  +M  + I+P++ TYNSLI   C + +WK    L  EM+++ + P+VV F+ +
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+G +   + ++++MI+RGV PD VTY +LMDG CL   +  A ++F +MV KGC
Sbjct: 329 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 388

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V SYNILIN  C+ Q+++ A+ L  +M  + +    +TYNTL+ GL  VG L  A+ 
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M  +  +PD  T+   +D LCKN  + EA+ + +AI     +  I  YN  I+G+C
Sbjct: 449 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 508

Query: 481 KMGRLKTACKLFHRLQHKG 499
           + G L+ A  LF  L  +G
Sbjct: 509 RAGELEAARDLFSNLSCQG 527



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 208/402 (51%), Gaps = 3/402 (0%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A   F ++      P+ V F  L+  + + ++    L L  +M + FG    PDV T N
Sbjct: 95  DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM-DSFGI--PPDVYTLN 151

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +I+  C    +  A  +L ++      P+  T+N+LI G C      EA  LF + +  
Sbjct: 152 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 211

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G QPDVVT+  ++N  CK G      RLL  M+Q+   P+ + YN+++D  C   +++ A
Sbjct: 212 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 271

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
             LF  M++KG   D+++YN LI+A C   + +    L  EM++ +I P+V+ ++T++  
Sbjct: 272 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 331

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G +  A  ++D M    V PD  T+   +DG C    + EAV+VF  + +  C   
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 391

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + +YN LING C++ R+  A  L  ++  +G I D VT +T+IH LC  G++  A  L  
Sbjct: 392 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 451

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           +M A   +P  VT+  LL    +N+  ++ +VLL  +    L
Sbjct: 452 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 493



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 189/374 (50%), Gaps = 1/374 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P  V +  ++  + K         L  QM    I P+V T N LI  FC +     A  +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             +++  G QPD  TFN +I   C +GK+ +   L +  I  G  PD VTY +LM+G C 
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           VG  S A  L  SMV K CR +V +YN +I++ CKD++V +A  L+ EM+++ I P + T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN+L+  L  +        L+++M  + ++P+   F+T +D LCK G +  A  V   + 
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               E  + TY  L++G C    +  A K+F  + HKG +P+V + + +I+  C+  +MD
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           KA  LL  M  +  +   VT+ TL+ G     +    + L H+M A    + DL     +
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG-QIPDLVTYRIL 468

Query: 582 VDLLSKDKKYRECL 595
           +D L K+    E +
Sbjct: 469 LDYLCKNHHLAEAM 482



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           ++DA+  +  ML     PS + +  LL+ + ++ +    L L  +M    + PD +T   
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+  C    +  A  V   +    C+    T+N LI GLC  G++  A  LF +   +G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             PDVVT  T+++ LCK G    A  LL  M  KNC P+ + + T++    ++ + ++  
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 560 VLLHKMAAEKL 570
            L  +M  + +
Sbjct: 273 NLFSEMITKGI 283


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 198/560 (35%), Positives = 305/560 (54%), Gaps = 27/560 (4%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  FD M+ M+P P    F  +L+ L  NK Y TV+SLFK+  SNG  PDL  LN+L+N
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
           C C +   + AF VL  IL+  + PN +T N LI GLC  G I +A     ++       
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N V++ TLINGLC+T  T    +L  ++    G   KPDVV YN+II  LCK+  +  A 
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLE---GHSVKPDVVMYNTIIHSLCKNKLLGDAC 223

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  +M  + I+PNV+TYN+L+ GFC +   KEA  L  EM    + PDV TFN +I+  
Sbjct: 224 DLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDAL 283

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K+GKM     +L +M++  + PD VTYNSL+DG+  + ++  A+ +F SM   G   +V
Sbjct: 284 GKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNV 343

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y  +I+  CK++ V++A+ L+ EM  + + P ++TY +L+ GL +  +L  A+ L  K
Sbjct: 344 RTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKK 403

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+   + PD +++   +D LCK G +  A + FQ +      L ++TYN +INGLCK   
Sbjct: 404 MKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADL 463

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA------------ 532
              A  L  +++ KG +PD +T  T+I  L ++ + DKA  +L +M A            
Sbjct: 464 FGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLK 523

Query: 533 ----------KNCV-PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
                     K C+ P  VT+ TL+ G+   N+      + + M A+  V  ++   + +
Sbjct: 524 EAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSM-AQMGVTPNVQCYTIM 582

Query: 582 VDLLSKDKKYRECLNQFRHL 601
           +D L K K   E ++ F  +
Sbjct: 583 IDGLCKKKTVDEAMSLFEEM 602



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 158/524 (30%), Positives = 258/524 (49%), Gaps = 61/524 (11%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            +  MI    SP + ++  L+             SL   +    + PD+   N LI+ L 
Sbjct: 225 LYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALG 284

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    A +VL  ++++C  P+ VT+N LI+G     ++  A  +F  +      PNV 
Sbjct: 285 KEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVR 344

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+ T+I+GLC+ +    A+ LFEEM  ++  +  PD+VTY S+IDGLCK+  +++A  L 
Sbjct: 345 TYTTMIDGLCKEKMVDEAMSLFEEM--KYKNMI-PDIVTYTSLIDGLCKNHHLERAIALC 401

Query: 248 LQMKDRNINP-----------------------------------NVITYNSLICGFCCV 272
            +MK++ I P                                   NV TYN +I G C  
Sbjct: 402 KKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKA 461

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG-------- 324
           D + EA  L  +M   G  PD +TF  +I    +  + DK  ++L  MI RG        
Sbjct: 462 DLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVR 521

Query: 325 ---------------VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
                          + PD VTY +LMDG+ LV  +  A+ +F SM   G   +V  Y I
Sbjct: 522 LKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTI 581

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           +I+  CK + V++A+ L+ EM  + + P+++TY +L+  L +  +L  A+ L+ +M+ + 
Sbjct: 582 MIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHG 641

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + PD +++   +DGLCK+G +  A ++FQ +      L ++ Y  +IN LCK G    A 
Sbjct: 642 IQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEAL 701

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            L  +++ KG +PD VT   +I  L ++ + DKA  +L +M A+
Sbjct: 702 DLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIAR 745



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 165/601 (27%), Positives = 277/601 (46%), Gaps = 96/601 (15%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+YF D ++         S+  L+  L K  +   V  L ++L  + + PD+ + N +I
Sbjct: 151 KALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTII 210

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK  +   A  +   ++    +PN VT+N L+ G C  G + EA  L  ++ +   +
Sbjct: 211 HSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNIN 270

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG---------- 233
           P+V TFNTLI+ L +      A  +   M+    A  KPDVVTYNS+IDG          
Sbjct: 271 PDVCTFNTLIDALGKEGKMKAAKIVLAVMMK---ACIKPDVVTYNSLIDGYFFLNKVKNA 327

Query: 234 -------------------------LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
                                    LCK+  VD+A  L  +MK +N+ P+++TY SLI G
Sbjct: 328 KYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDG 387

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C     + A  L  +M + G+QPDV ++  +++  CK G+++      + ++ +G + +
Sbjct: 388 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLN 447

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
             TYN +++G C       A +L   M  KGC  D  ++  +I A  +  + + A  + R
Sbjct: 448 VQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILR 507

Query: 389 EMLSER-----------------------IRPSVITYNTLLSGLFQVGNL---------- 415
           EM++                         I+P V+TY TL+ G F V  L          
Sbjct: 508 EMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSM 567

Query: 416 -------------------------GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
                                     +A+ L ++M+  ++ P+  T+ + ID LCKN  +
Sbjct: 568 AQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHL 627

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             A+ + + ++    +  + +Y  L++GLCK GRL+ A ++F RL  KG   +V   + M
Sbjct: 628 ERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAM 687

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           I+ LCK G  D+A DL   ME K C+P  VTF  ++    + ++  K   +L +M A  L
Sbjct: 688 INELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747

Query: 571 V 571
           +
Sbjct: 748 M 748



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 38/230 (16%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            A Y F  M +M  +P +  +TI++  L K K  D  +SLF+ +    +F          
Sbjct: 559 HAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMF---------- 608

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
                                    PN VT+  LI+ LC    +  A  L K++      
Sbjct: 609 -------------------------PNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQ 643

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V ++  L++GLC++     A ++F+ ++ +   +   +V  Y ++I+ LCK G  D+A
Sbjct: 644 PDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHL---NVQVYTAMINELCKAGLFDEA 700

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            +L  +M+D+   P+ +T++ +I      D+  +A+ +  EM+  G+  +
Sbjct: 701 LDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 201/570 (35%), Positives = 310/570 (54%), Gaps = 11/570 (1%)

Query: 35  DLSSHHFKDGTSIAKFLNDRHKSGNITS-NEAVYFFDCMIKMKPSPGMTSFTILLTMLAK 93
           D  SH   +GT +   + +   SG + + +EA+  F  M +MKP P +  FT+LL  + +
Sbjct: 31  DTESH--SNGTQLLISMRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVR 88

Query: 94  NKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
            K Y T +SL K + S+ G+  D   LN++INCLC++ + +  F VLG + +    P  +
Sbjct: 89  LKHYTTAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVM 148

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T   LINGLC +G + +A  L   +       +V T+  LINGLC+T +TL A+    +M
Sbjct: 149 TLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKM 208

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                   KP+VV Y++I+DGLCKDG V +A  L  +M  + + PN++TY  LI G C  
Sbjct: 209 EERN---WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNF 265

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
             WKEA  L  EMM  G++PD+   N +++  CK+GK+ +   ++  MI  G  PD  TY
Sbjct: 266 GRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTY 325

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           NSL+  +CL  +++ A  +F  MVS+G   D+  +  LI+  CKD+ +  A+ L  EM  
Sbjct: 326 NSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSK 385

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
               P V T+ TL+ G  Q G    A +L   M     VP+  T A  +DGLCK   + E
Sbjct: 386 MGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSE 445

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           AV + +A+     +L I  Y+ L++G+C  G+L  A +LF  L  KG   +V   + MI 
Sbjct: 446 AVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIK 505

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            LCK+G +DKA DLL++ME   C+P+  T+   ++G +   + ++ +  L  M  +   V
Sbjct: 506 GLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSV 565

Query: 573 SDLSLSSKVVDLLSK---DKKYRECLNQFR 599
            D + +  +++ LS    D K RE L + R
Sbjct: 566 -DAATTEFIINYLSTNEGDTKIREFLFRKR 594


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 189/558 (33%), Positives = 313/558 (56%), Gaps = 39/558 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F  M+K +P P +  F+ LL+ +AK  ++D V+SL +++ + G+  +L+  ++L
Sbjct: 63  DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C+    S A  VL ++++  + P+ VT N L+NG C   RI +A  L  ++     
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  TFNTLI+GL R      A+ L + MV +    C+PD+VTY  +++GLCK G +D 
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG---CQPDLVTYGIVVNGLCKRGDIDL 239

Query: 243 AKELL-----------------------------------LQMKDRNINPNVITYNSLIC 267
           A  LL                                    +M ++ I PNV+TYNSLI 
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
             C    W +A  L  +M++  + P+VVTF+A+I+   K+GK+ +  +L + MI+R ++P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  TY+SL++GFC+  R+  A+ +F  M+SK C  +V +YN LI   CK ++V++ + L+
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           REM    +  + +TY TL+ G FQ     +A  +  +M  + V+PD  T++  +DGLC N
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G V  A+ VF+ ++  K E  I TYN +I G+CK G+++    LF  L  KG  P+VVT 
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +TM+   C++G  ++A+ L  +M+ +  +P   T+ TL+R  +++  K+    L+ +M +
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599

Query: 568 EKLVVSDLSLSSKVVDLL 585
            +  V D S    V ++L
Sbjct: 600 CRF-VGDASTIGLVTNML 616


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  338 bits (868), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 182/510 (35%), Positives = 295/510 (57%), Gaps = 3/510 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++AV  F+ M  + P+P    F  +L  L   K+Y T +SL+K++  + + PD F LN+
Sbjct: 39  ADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNI 98

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +INC C  G    AF  + +IL+  + PNT+T N L+ GLC EG++ EA R   K+    
Sbjct: 99  IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              + +++  LING+C+   T  A++L   +  E  +I +P+VV Y+ IID LCKD  VD
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRI--ERWSI-RPNVVIYSMIIDRLCKDTLVD 215

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A +L  +M  + I+P+V+TY+ L+ GFC V     A  L  EM+   + PD+ T+  ++
Sbjct: 216 EAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILV 275

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK+GK+ +   +L +M++  VN D V Y++LMDG+CLV  ++ A+ +F +M   G  
Sbjct: 276 DALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVT 335

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            DV+ Y+I+IN  CK ++V++A+ L+ E+  + + P  +TY +L+  L + G +     L
Sbjct: 336 PDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDL 395

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            D+M      PD  T+   ID LCKNG +  A+ +F  +++      + T+  L++GLCK
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCK 455

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
           +GRLK A + F  L  KG   +V T + MI+ LCKEG +D+A  L   ME   C+   VT
Sbjct: 456 VGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVT 515

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           F  ++R F   ++  K   L+ +M A  L+
Sbjct: 516 FEIMIRAFFDKDENDKAEKLVREMIARGLL 545


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 186/511 (36%), Positives = 295/511 (57%), Gaps = 4/511 (0%)

Query: 62  SNEAVYFFDCMIKMK-PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
            N  +  F+ ++  K P+P +  F  +L+ L K K + T +SL +++  NG+  D F  N
Sbjct: 50  ENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFN 109

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +LINC  ++G+ S +F V G+IL+  F PN +TFN LI GLC +G I +A     K+   
Sbjct: 110 ILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQ 169

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
               + V++ TLINGLC+      AL+L + +    G + +P+ V YN IID +CK   V
Sbjct: 170 GFHLDQVSYGTLINGLCKVGRITAALQLLKRVD---GKLVQPNAVMYNMIIDNMCKAKLV 226

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           + A +L  QM  + I+P+  T NSLI GFC +   KEA  L  +M+   + P + TF+ +
Sbjct: 227 NDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSIL 286

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+GK+ +   +L + +++ +  D VTYNSLMDG+CLV  I++A+++F SM S+G 
Sbjct: 287 VDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGV 346

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V SY  +IN  CK + V++AV L+ EM   +I P+V+TYN+L+ GL ++G +   LK
Sbjct: 347 IANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLK 406

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L+D+M      P+  T+ + +D LCKN  V +A+ +   +++      + TY  LI GLC
Sbjct: 407 LVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLC 466

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G+L+ A K+F  L  KG   DV T + MI   C +G  D A  LL  ME   C+P+  
Sbjct: 467 QSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAK 526

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           T+  ++    + ++      LL +M A  L+
Sbjct: 527 TYEIVILSLFEKDENDMAEKLLREMIARGLL 557



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 132/274 (48%), Gaps = 1/274 (0%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G+ P  ++  + ++++ +D + + ++    L+  +   P  + +N ++         S A
Sbjct: 31  GLFPSSISLYSQLHHH-QDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTA 89

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
             L   M   G   D +++NILIN   +      +  ++ ++L +   P+ IT+NTL+ G
Sbjct: 90  LSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKG 149

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L   G++  AL   DK+       D  ++ T I+GLCK G +  A+Q+ + +     +  
Sbjct: 150 LCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPN 209

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
              YN +I+ +CK   +  A  L+ ++  K   PD  TC+++I+  C  GQ+ +A  LL 
Sbjct: 210 AVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLH 269

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
            M  +N  P   TF  L+  F +  K  +  ++L
Sbjct: 270 KMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  337 bits (865), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 190/558 (34%), Positives = 302/558 (54%), Gaps = 48/558 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M++ +P P +  F  L+ ++ +  + D V+SL K++    +  + +   +L
Sbjct: 63  DDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTIL 122

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + C C       A    G+I +  F P  VTFN L++GLC E RI EA  LF ++    C
Sbjct: 123 MKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----C 178

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAI----CK--------- 221
            PNVVTF TL+NGLCR    + A+ L + M+ +        +G I    CK         
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238

Query: 222 ------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                       P+VV YN+IIDGL KDG    A  L ++M+++ I P+++TYN +I GF
Sbjct: 239 LLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W +A+ L  EM++  + PDVVTF+A+IN   K+GK  +   L + M+ R + P T
Sbjct: 299 CISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST 358

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTY+S++DGFC   R+  A  +F    +KGC  D+ ++N LI   C+ ++V+D + L  E
Sbjct: 359 VTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 418

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +  + ITY TL+ G  QVG+L  A  L+ +M  + V P+  T  T +DGLC NG 
Sbjct: 419 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478

Query: 450 VLEAVQVFQAIRNCK-----------CELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +A+++F+A++  K            E  ++TYN LI GL   G+   A +L+  + H+
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +T S+MI  LCK+ ++D+A  +   M +K+  P  VTF TL+ G+ +       
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDG 598

Query: 559 VVLLHKMAAEKLVVSDLS 576
           + L  +M    +V   ++
Sbjct: 599 LELFCEMGQRGIVADAIT 616



 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 159/515 (30%), Positives = 275/515 (53%), Gaps = 19/515 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F  M K    P + +FT L+  L +  +    V+L  R+  +GL P+      +
Sbjct: 168 SEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTI 223

Query: 123 INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++ +CKMG T  A  +L ++   S   PN V +N +I+GL  +GR  +A  LF ++    
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKE 283

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P++VT+N +ING C +     A +L +EM+        PDVVT++++I+   K+G   
Sbjct: 284 IFPDIVTYNCMINGFCISGRWSDAEQLLQEMLER---KINPDVVTFSALINAFVKEGKFF 340

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A+EL  +M  R+I P+ +TY+S+I GFC  +    A+ +F      G  PD++TFN +I
Sbjct: 341 EAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLI 400

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C+  ++D   +LL  M + G+  +T+TY +L+ GFC VG ++ A++L   M+S G  
Sbjct: 401 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVC 460

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSER-----------IRPSVITYNTLLSGLF 410
            +V + N L++  C + K++DA+ +++ M   +           + P V TYN L+ GL 
Sbjct: 461 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLI 520

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
             G   +A +L ++M    +VPD+ T+++ IDGLCK   + EA Q+F ++ +      + 
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVV 580

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           T+N LI G CK G +    +LF  +  +G + D +T  T+I+   K   +D A D+  +M
Sbjct: 581 TFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEM 640

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +    P  +T   +L G     +  + V +L  +
Sbjct: 641 ISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 210/429 (48%), Gaps = 49/429 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  +  ++  L K+ ++    +LF  +    +FPD+   N +IN  C  G  S A  +
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--------------------- 177
           L  +L     P+ VTF+ LIN    EG+  EA  L+ ++                     
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370

Query: 178 --------NVF------ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
                   ++F       C P+++TFNTLI G CR +     +KL  EM  E G +   +
Sbjct: 371 QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM-TEAGLVA--N 427

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
            +TY ++I G C+ G ++ A++LL +M    + PNV+T N+L+ G C     K+A  +F 
Sbjct: 428 TITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 284 EM----MD-------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
            M    MD       NGV+PDV T+N +I     +GK  +   L E M  RG+ PDT+TY
Sbjct: 488 AMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           +S++DG C   R+  A ++F SM SK    DV ++N LI   CK   V+D + L+ EM  
Sbjct: 548 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQ 607

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I    ITY TL+ G  +V N+  AL +  +M  + V PD+ T    + GL     +  
Sbjct: 608 RGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELER 667

Query: 453 AVQVFQAIR 461
           AV + + ++
Sbjct: 668 AVAMLEDLQ 676



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 191/377 (50%), Gaps = 14/377 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A      M++ K +P + +F+ L+    K  ++     L+  +    + P     + +
Sbjct: 305 SDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSM 364

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK      A  +         +P+ +TFN LI G C   R+ +  +L  ++     
Sbjct: 365 IDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 424

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N +T+ TLI+G C+  +   A  L +EM++    +C P+VVT N+++DGLC +G +  
Sbjct: 425 VANTITYTTLIHGFCQVGDLNAAQDLLQEMISS--GVC-PNVVTCNTLLDGLCDNGKLKD 481

Query: 243 AKELLLQMKDR-----------NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           A E+   M+              + P+V TYN LICG      + EA+ L+ EM   G+ 
Sbjct: 482 ALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PD +T+++MI+  CK  ++D+  ++ + M  +  +PD VT+N+L+ G+C  G +    EL
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLEL 601

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M  +G   D  +Y  LI    K   ++ A+ +++EM+S  + P  IT   +L+GL+ 
Sbjct: 602 FCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWS 661

Query: 412 VGNLGDALKLIDKMQLN 428
              L  A+ +++ +Q++
Sbjct: 662 KEELERAVAMLEDLQMS 678



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 189/381 (49%), Gaps = 9/381 (2%)

Query: 206 LKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
           +K  ++ ++ FG + +    P V+ +  ++  + + G  D    L  +M+   +  N  +
Sbjct: 59  IKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYS 118

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +  L+  FC       A   F ++   G  P VVTFN +++  C +   D+++  L+L  
Sbjct: 119 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVE---DRISEALDLFH 175

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           Q    P+ VT+ +LM+G C  GR+  A  L   M+  G + +  +Y  +++  CK     
Sbjct: 176 QM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 234

Query: 382 DAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
            A+ L R+M     I P+V+ YNT++ GL++ G   DA  L  +MQ  ++ PD  T+   
Sbjct: 235 SALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCM 294

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+G C +G   +A Q+ Q +   K    + T++ LIN   K G+   A +L+  +  +  
Sbjct: 295 INGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSI 354

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           IP  VT S+MI   CK+ ++D A  +      K C P  +TF TL+ G+ +  +    + 
Sbjct: 355 IPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIK 414

Query: 561 LLHKMAAEKLVVSDLSLSSKV 581
           LLH+M    LV + ++ ++ +
Sbjct: 415 LLHEMTEAGLVANTITYTTLI 435



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 159/318 (50%), Gaps = 5/318 (1%)

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L  GF  +    +A  LF  M+ +   P V+ F  ++    + G+ D V  L + M    
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           +  +  ++  LM  FC   ++  A   F  +   G    V ++N L++  C + ++ +A+
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ +M     +P+V+T+ TL++GL + G + +A+ L+D+M  + + P+  T+ T +DG+
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 445 CKNGFVLEAVQVFQAIRNCKCEL-RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           CK G  + A+ + + +      +  +  YN +I+GL K GR   A  LF  +Q K   PD
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +VT + MI+  C  G+   A  LL +M  +   P  VTF  L+  FV+  K  +   L  
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347

Query: 564 KMAAEKLVVSDLSLSSKV 581
           +M    ++ S ++ SS +
Sbjct: 348 EMLPRSIIPSTVTYSSMI 365



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 114/221 (51%), Gaps = 4/221 (1%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + ++DA+ L+  M+  R  PSVI +  L+  + ++G     + L  KM++  +  ++++F
Sbjct: 60  KGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSF 119

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              +   C    +  A+  F  I        + T+N L++GLC   R+  A  LFH++  
Sbjct: 120 TILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK 179

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
               P+VVT +T+++ LC+EG++ +A  LL  M      P+++T+ T++ G  +      
Sbjct: 180 ----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVS 235

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            + LL KM     ++ ++ + + ++D L KD ++ +  N F
Sbjct: 236 ALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLF 276



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 5/197 (2%)

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L SG  ++  L DA+ L   M  +  +P    F   +  + + G     + + + +   +
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                 ++  L+   C   +L  A   F ++   G  P VVT +T++H LC E ++ +A 
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           DL   M    C P+ VTF TL+ G  +  +  + V LL +M  + L  + ++  + +VD 
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT-IVDG 226

Query: 585 LSKDKKYRECLNQFRHL 601
           + K       LN  R +
Sbjct: 227 MCKMGDTVSALNLLRKM 243



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/154 (20%), Positives = 61/154 (39%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   ++ M      P   +++ ++  L K  + D    +F  + S    PD+   N LI
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CK G+      +   + +     + +T+  LI G      I  A  +F+++      
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVY 646

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           P+ +T   ++ GL        A+ + E++    G
Sbjct: 647 PDTITIRNMLTGLWSKEELERAVAMLEDLQMSVG 680


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/539 (35%), Positives = 307/539 (56%), Gaps = 9/539 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL--FKRLNSNGLFPDLFVLN 120
           ++A+  F  M+K +P P +  F  LL+ +AK K++D V+SL    ++   G  P +  L+
Sbjct: 24  DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLS 83

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
            L+N  C     S A  ++ +++   + P+T+TF  LI+GL    +  EA  L  ++   
Sbjct: 84  SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 143

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            C PN+VT+  ++NGLC+  +  +A  L  +M     A  + DVV +N+IID LCK   V
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME---AAKIEADVVIFNTIIDSLCKYRHV 200

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D A  L  +M+ + I PNV+TY+SLI   C    W +A  L  +M++  + P++VTFNA+
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+   K+GK  +  +L + MI+R ++PD  TYNSL++GFC+  R+ +A+++F  MVSK C
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D+ +YN LI   CK ++VED   L+REM    +    +TY TL+ GLF  G+  +A K
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           +  +M  + V PD  T++  +DGLC NG + +A++VF  ++  + +L I  Y  +I G+C
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 440

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G++     LF  L  KG  P+VVT +TMI  LC +  + +A  LL  M+    +P   
Sbjct: 441 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 500

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
           T+ TL+R  +++  K+    L+ +M + +  V D S    V ++L     DK + + L+
Sbjct: 501 TYNTLIRAHLRDGDKAASAELIREMRSCRF-VGDASTIGLVANMLHDGRLDKSFLDMLS 558



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 217/403 (53%), Gaps = 3/403 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EAV   D M++    P + ++ +++  L K    D   +L  ++ +  +  D+ + N 
Sbjct: 130 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 189

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+ LCK      A  +   +      PN VT++ LI+ LC+ GR  +A++L   +    
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +PN+VTFN LI+   +    + A KL ++M+        PD+ TYNS+I+G C    +D
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS---IDPDIFTYNSLINGFCMHDRLD 306

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KAK++   M  ++  P++ TYN+LI GFC     ++   LF EM   G+  D VT+  +I
Sbjct: 307 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 366

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
                DG  D   ++ + M+  GV PD +TY+ L+DG C  G++ +A E+F  M     +
Sbjct: 367 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 426

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+Y Y  +I   CK  KV+D   L+  +  + ++P+V+TYNT++SGL     L +A  L
Sbjct: 427 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 486

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           + KM+ +  +PDS T+ T I    ++G    + ++ + +R+C+
Sbjct: 487 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 529



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 38/256 (14%)

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN--------------------- 414
           KD K++DA+ L+  M+  R  PS+  +N LLS + ++                       
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 415 ----------------LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
                           + DA+ L+D+M      PD+ TF T I GL  +    EAV +  
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +    C+  + TY  ++NGLCK G +  A  L ++++      DVV  +T+I  LCK  
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +D A +L  +ME K   P+ VT+ +L+       + S    LL  M  EK +  +L   
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTF 257

Query: 579 SKVVDLLSKDKKYREC 594
           + ++D   K+ K+ E 
Sbjct: 258 NALIDAFVKEGKFVEA 273


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 192/563 (34%), Positives = 309/563 (54%), Gaps = 42/563 (7%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+K +P P +  F  LL+ +AK K++D V+SL +++   G+  +L+  N+LINC C+   
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM----------------------- 168
            S A  +LG++++  + P+ VT + L+NG C   RI                        
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 169 ------------EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
                       EA  L  ++    C PN+VT+  ++NGLC+  +  +A  L  +M    
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME--- 177

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
            A  + DVV +N+IID LCK   VD A  L  +M+ + I PNV+TY+SLI   C    W 
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  L  +M++  + P++VTFNA+I+   K+GK  +  +L + MI+R ++PD  TYNSL+
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           +GFC+  R+ +A+++F  MVSK C  D+ +YN LI   CK ++VED   L+REM    + 
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
              +TY TL+ GLF  G+  +A K+  +M  + V PD  T++  +DGLC NG + +A++V
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F  ++  + +L I  Y  +I G+CK G++     LF  L  KG  P+VVT +TMI  LC 
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +  + +A  LL  M+    +P   T+ TL+R  +++  K+    L+ +M + +  V D S
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF-VGDAS 536

Query: 577 LSSKVVDLLSK---DKKYRECLN 596
               V ++L     DK + + L+
Sbjct: 537 TIGLVANMLHDGRLDKSFLDMLS 559



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 240/468 (51%), Gaps = 7/468 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV   D M++M   P   +FT L+  L  + +    V+L  R+   G  P+L    ++
Sbjct: 97  SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 156

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G    AF +L ++  +    + V FN +I+ LC    + +A  LFK++     
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVVT+++LI+ LC       A +L  +M+ +      P++VT+N++ID   K+G   +
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK---KINPNLVTFNALIDAFVKEGKFVE 273

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++L   M  R+I+P++ TYNSLI GFC  D   +AK +F  M+     PD+ T+N +I 
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK  +++    L   M  RG+  DTVTY +L+ G    G    A+++F  MVS G   
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +Y+IL++  C + K+E A+ ++  M    I+  +  Y T++ G+ + G + D   L 
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             + L  V P+  T+ T I GLC    + EA  + + ++         TYN LI    + 
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           G    + +L   ++    + D  T   + + L  +G++DK+    LDM
Sbjct: 514 GDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS---FLDM 557



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 217/403 (53%), Gaps = 3/403 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EAV   D M++    P + ++ +++  L K    D   +L  ++ +  +  D+ + N 
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+ LCK      A  +   +      PN VT++ LI+ LC+ GR  +A++L   +    
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +PN+VTFN LI+   +    + A KL ++M+        PD+ TYNS+I+G C    +D
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS---IDPDIFTYNSLINGFCMHDRLD 307

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KAK++   M  ++  P++ TYN+LI GFC     ++   LF EM   G+  D VT+  +I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
                DG  D   ++ + M+  GV PD +TY+ L+DG C  G++ +A E+F  M     +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+Y Y  +I   CK  KV+D   L+  +  + ++P+V+TYNT++SGL     L +A  L
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           + KM+ +  +PDS T+ T I    ++G    + ++ + +R+C+
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 205/632 (32%), Positives = 333/632 (52%), Gaps = 49/632 (7%)

Query: 7   HRSFSLASKAGYRCNFWCSFGRPPNPKTDLS-------SHHFKDGTSIAKFLNDRHKSGN 59
            RS SL +K  +        G PP   +  +          F   +   + +     S  
Sbjct: 2   QRSISLTAKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDI 61

Query: 60  ITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
           I  ++AV  F  M+K +P P +  F  LL+ +AK  +++ V+SL +++ + G+  DL+  
Sbjct: 62  IKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-- 177
           ++ INC C+    S A  VL ++++  + P+ VT + L+NG C   RI +A  L  ++  
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181

Query: 178 -----NVF----------------------------ACDPNVVTFNTLINGLCRTRNTLV 204
                + F                             C P++VT+ T++NGLC+  +  +
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL L  +M     A  K +VV +N+IID LCK   V+ A +L  +M+ + I PNV+TYNS
Sbjct: 242 ALNLLNKME---AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI   C    W +A  L   M++  + P+VVTFNA+I+   K+GK+ +  +L E MIQR 
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           ++PDT+TYN L++GFC+  R+  A+++F  MVSK C  ++ +YN LIN  CK ++VED V
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+REM    +  + +TY T++ G FQ G+   A  +  +M  N V  D  T++  + GL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G +  A+ +F+ ++  + EL I  YN +I G+CK G++  A  LF  L  K   PDV
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDV 535

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           VT +TMI  LC +  + +A+DL   M+    +P+  T+ TL+R  +++  ++    L+ +
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           M +    V D S  S V ++L   +  +  LN
Sbjct: 596 MRSSGF-VGDASTISLVTNMLHDGRLDKSFLN 626


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  334 bits (857), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 196/585 (33%), Positives = 314/585 (53%), Gaps = 13/585 (2%)

Query: 8   RSFSLASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVY 67
           R F+L+S   +       F   P+  +   S +    TS A+FL+      ++  + A+ 
Sbjct: 14  RYFALSSNPTH-------FLLHPSHSSSTFSTYASINTSRAQFLDSLRNVKSV--DVALD 64

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F+  M+ MKP P +  F +L  ++AK K Y T +SL K ++  G+ P++   N++INCLC
Sbjct: 65  FYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLC 124

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           ++  T   F VLG + +    P+ VTF  ++NGLC EG + +A R    L     + +  
Sbjct: 125 RLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRY 184

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T   +INGLC+  ++  AL   ++M  +    C  DV  YN+++DGLCKDG V +A +L 
Sbjct: 185 TRGAIINGLCKVGHSSAALSYLKKMEEQ---NCNLDVTAYNAVVDGLCKDGMVFEAWDLF 241

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            QM  + I P++ TYN LI G C  D WKEA  L   MM  G+ PDV TFN +     K 
Sbjct: 242 SQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKT 301

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G + +   +   M   G+  D VTY+S++   C++ ++  A E+F  M+ KGC  ++ +Y
Sbjct: 302 GMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTY 361

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             LI+  C+ + +  A+    EM++  + P+++T+NTL+ G  + G    A +L   M  
Sbjct: 362 TSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHK 421

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           +  +PD  T A  +DGL K  F  EA+ +F+ +     +L I  Y+ ++NG+C  G+L  
Sbjct: 422 HGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLND 481

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A +LF  L  KG   DVVT + MI+ LCKEG +D A DLL+ ME   C P E T+   ++
Sbjct: 482 ALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQ 541

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           G ++  + SK    L  M   K   ++ + +  +++  S +K+ R
Sbjct: 542 GLLRRYEISKSTKYLMFMKG-KGFRANATTTKLLINYFSANKENR 585


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 185/558 (33%), Positives = 304/558 (54%), Gaps = 48/558 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M++ +P P +  F  LL ++ + ++ D V+SL +++    +  +++   +L
Sbjct: 58  DDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTIL 117

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I C C       A    G+I +  F P+ VTF+ L++GLC E R+ EA   F ++    C
Sbjct: 118 IKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----C 173

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAIC-------------- 220
            PNV+ F TL+NGLCR    + A+ L + MV +        +G I               
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233

Query: 221 -----------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                      KP+VV Y++IIDGL KDG    A+ L  +M+++ I+PN+ TYN +I GF
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W EA+ L  EM +  + PDVVTF+ +IN   K+GK  +   L   M+ RG+ P+T
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT 353

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TYNS++DGF    R+  A  +F  M +KGC  DV +++ILI+  C  ++V+D + L  E
Sbjct: 354 ITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHE 413

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +  + ITY TL+ G  Q+GNL  AL L+ +M  + V P+  T  T +DGLC NG 
Sbjct: 414 MSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGK 473

Query: 450 VLEAVQVFQAIRNCKCEL-----------RIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +A+++F+ ++  K +L            ++TYN LI GL   G+   A +L+  + H+
Sbjct: 474 LKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHR 533

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +T +++I  LCK+ ++D+A  +   M +K   P  VTF TL+ G+ +  +    
Sbjct: 534 GLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDG 593

Query: 559 VVLLHKMAAEKLVVSDLS 576
           + +  +M    +V + ++
Sbjct: 594 LEVFCEMGRRGIVANAIT 611



 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 162/509 (31%), Positives = 274/509 (53%), Gaps = 19/509 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA++FF  + K    P + +FT L+  L +  +    V+L  R+  +GL P+      +
Sbjct: 163 SEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 218

Query: 123 INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++ +CKMG T  A  +L ++   S   PN V ++ +I+GL  +GR  +A  LF ++    
Sbjct: 219 VDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKG 278

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN+ T+N +ING C +     A +L  EM   F     PDVVT++ +I+ L K+G   
Sbjct: 279 ISPNLFTYNCMINGFCSSGRWSEAQRLLREM---FERKMSPDVVTFSVLINALVKEGKFF 335

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A+EL  +M  R I PN ITYNS+I GF   +    A+ +F  M   G  PDV+TF+ +I
Sbjct: 336 EAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILI 395

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C   ++D   +LL  M +RG+  +T+TY +L+ GFC +G ++ A +L   M+S G  
Sbjct: 396 DGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVC 455

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSER-----------IRPSVITYNTLLSGLF 410
            +V + N L++  C + K++DA+ +++ M   +           + P V TYN L+ GL 
Sbjct: 456 PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLI 515

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
             G   +A +L ++M    +VPD+ T+ + IDGLCK   + EA Q+F ++ +      + 
Sbjct: 516 NEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVV 575

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           T+  LING CK+GR+    ++F  +  +G + + +T  T+IH  C+ G ++ A D+  +M
Sbjct: 576 TFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEM 635

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            +    P  +T   +L G     +  + V
Sbjct: 636 ISSGVYPDTITIRNMLTGLWSKEELKRAV 664



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 205/423 (48%), Gaps = 49/423 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ ++  L K+ +     +LF  +   G+ P+LF  N +IN  C  G  S A  +
Sbjct: 246 PNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRL 305

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +     +P+ VTF+ LIN L  EG+  EA  L+ ++      PN +T+N++I+G  +
Sbjct: 306 LREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSK 365

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A ++F  M  +    C PDV+T++ +IDG C    VD   +LL +M  R +  N
Sbjct: 366 QNRLDAAERMFYLMATKG---CSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVAN 422

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM-------- 310
            ITY +LI GFC + +   A  L  EM+ +GV P+VVT N +++  C +GK+        
Sbjct: 423 TITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFK 482

Query: 311 --------------------------------------DKVNRLLELMIQRGVNPDTVTY 332
                                                  +   L E M  RG+ PDT+TY
Sbjct: 483 VMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITY 542

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           NS++DG C   R+  A ++F SM SKG   DV ++  LIN  CK  +V D + ++ EM  
Sbjct: 543 NSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGR 602

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I  + ITY TL+ G  QVGN+  AL +  +M  + V PD+ T    + GL     +  
Sbjct: 603 RGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 662

Query: 453 AVQ 455
           AVQ
Sbjct: 663 AVQ 665



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 196/369 (53%), Gaps = 14/369 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA      M + K SP + +F++L+  L K  ++     L+  +   G+ P+    N +
Sbjct: 300 SEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSM 359

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K      A  +   +     +P+ +TF+ LI+G C   R+ +  +L  +++    
Sbjct: 360 IDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGL 419

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N +T+ TLI+G C+  N   AL L +EM++    +C P+VVT N+++DGLC +G +  
Sbjct: 420 VANTITYTTLIHGFCQLGNLNAALDLLQEMISS--GVC-PNVVTCNTLLDGLCNNGKLKD 476

Query: 243 AKELLLQMKDR-----------NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           A E+   M+             ++ P+V TYN LICG      + EA+ L+ EM   G+ 
Sbjct: 477 ALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLV 536

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PD +T+N++I+  CK  ++D+  ++ + M  +G +PD VT+ +L++G+C VGR+    E+
Sbjct: 537 PDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEV 596

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M  +G   +  +Y  LI+  C+   +  A+ +++EM+S  + P  IT   +L+GL+ 
Sbjct: 597 FCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS 656

Query: 412 VGNLGDALK 420
              L  A++
Sbjct: 657 KEELKRAVQ 665



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 191/381 (50%), Gaps = 9/381 (2%)

Query: 206 LKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
           +K  ++ ++ FG + +    P V+ +  ++  + +    D    L  +M+ R I  N+ +
Sbjct: 54  IKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYS 113

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +  LI  FC       A   F ++   G  P +VTF+ +++  C +   D+V+  L    
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVE---DRVSEALHFFH 170

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           Q    P+ + + +LM+G C  GR+  A  L   MV  G + +  +Y  +++  CK     
Sbjct: 171 QI-CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229

Query: 382 DAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
            A+ L R+M    RI+P+V+ Y+ ++ GL++ G   DA  L  +MQ   + P+ FT+   
Sbjct: 230 SALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCM 289

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+G C +G   EA ++ + +   K    + T++ LIN L K G+   A +L++ +  +G 
Sbjct: 290 INGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           IP+ +T ++MI    K+ ++D A  +   M  K C P  +TF  L+ G+    +    + 
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409

Query: 561 LLHKMAAEKLVVSDLSLSSKV 581
           LLH+M+   LV + ++ ++ +
Sbjct: 410 LLHEMSRRGLVANTITYTTLI 430



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 6/269 (2%)

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L  GF  +  +  A +LF  MV       V  +  L+    + ++ +  + L+R+M   R
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I  ++ ++  L+        L  AL    K+      P   TF+T + GLC    V EA+
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
             F  I    C+  +  +  L+NGLC+ GR+  A  L  R+   G  P+ +T  T++  +
Sbjct: 167 HFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 515 CKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           CK G    A +LL  ME  + + P+ V +  ++ G  ++ +++    L  +M  EK +  
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEM-QEKGISP 281

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +L   + +++      ++ E     R + 
Sbjct: 282 NLFTYNCMINGFCSSGRWSEAQRLLREMF 310


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 204/606 (33%), Positives = 314/606 (51%), Gaps = 44/606 (7%)

Query: 32  PKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTML 91
           PK  +SS  F          N R ++     ++AV  F+ M+++ P P  + F  LL  +
Sbjct: 10  PKFSISSRFFGHFQPQNPHKNCRFRN----VDDAVTCFNRMVRVFPPPPTSVFDKLLGAI 65

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
            +   Y T +SLF +L S G+ P +    +LINC      T+ AF +L  IL+S + PN 
Sbjct: 66  VRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNL 125

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           VTFN +ING C  G I +A    + L       +  T+ TLINGL +      AL L +E
Sbjct: 126 VTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQE 185

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M     +  +P++V Y+++IDGLCKDGFV  A  L  Q+ +R I  + +TYNSLI G C 
Sbjct: 186 MEK---SSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCS 242

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
           V  W+E   L  +M+   V PD  TFN +I+  CK+G++ +   +L +M +RG  PD VT
Sbjct: 243 VGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YN+LM+G+C    +  ARELF  MV +G   DV +YN+LI+  CK + V++A+ L++E+ 
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
           ++ + P++ +YN+L+ GL   G +    KL+D+M  +   PD  T+   ID LCK G +L
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422

Query: 452 EAVQV---------------FQAIRNCKC--------------------ELRIETYNCLI 476
           EA+ V               + A+ +  C                    E  I  YN LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           NG CK   +  A  LF  ++HK  IPD+ + +++I  LC  G++    +LL +M      
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS 542

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           P  +T+  LL  F +     K + L  ++   + +  D   +  +VD L K +K +   +
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQIV--EGIWPDFYTNHAIVDNLCKGEKLKMAED 600

Query: 597 QFRHLL 602
             +HLL
Sbjct: 601 ALKHLL 606



 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 173/544 (31%), Positives = 287/544 (52%), Gaps = 6/544 (1%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           L+  +  D  +    +N   K+G I +  A++    M K    P +  ++ L+  L K+ 
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKA--ALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
                + L  ++   G+  D    N LI+  C +G       +L +++R    P+  TFN
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+ LC EGRI+EA  +   ++     P++VT+N L+ G C   N   A +LF  MV  
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                +PDV+ YN +IDG CK   VD+A  L  ++ ++N+ P + +YNSLI G C     
Sbjct: 330 G---LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
              K L  EM  +   PDVVT+N +I+  CK+G++ +   +L +M+++GV P+ VTYN++
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           MDG+CL   ++ A+++F  MV  G   D+ +YN+LIN  CK + V++A+ L++EM  + +
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P + +YN+L+ GL  +G +    +L+D+M  +   PD  T+   +D  CK     +A+ 
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +F+ I          T + +++ LCK  +LK A      L   G  P+V T + +I+ LC
Sbjct: 567 LFRQIVEGIWP-DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           K+G   +A  LL  ME  +  P  +TF  ++   +Q N+  K   L  +M A  LV  + 
Sbjct: 626 KDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEK 685

Query: 576 SLSS 579
           SL+ 
Sbjct: 686 SLNQ 689


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 185/528 (35%), Positives = 291/528 (55%), Gaps = 4/528 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+ F+  M+ MKP P +  F +L  ++AK K Y T +SL K ++  G+ P++   N++IN
Sbjct: 10  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVIN 69

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
           CLC++  T   F VLG + +    P+ VTF  ++NGLC EG + +A R    L     + 
Sbjct: 70  CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYES 129

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +  T   +INGLC+  ++  AL   ++M  +    C  DV  Y++++DGLCKDG V +A 
Sbjct: 130 DRYTRGAIINGLCKVGHSSAALSYLKKMEEQN---CNLDVTAYSAVVDGLCKDGMVFEAL 186

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  QM  + I PN+ TYN LI G C  D WKEA  L   MM  G+ PDV TFN +    
Sbjct: 187 DLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRF 246

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K G + +   +   M   G+  + VTYNS++   C++ ++  A E+F  M+ KGC  ++
Sbjct: 247 LKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNI 306

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN LI+  C+ + +  A+    EM++  + P V+T++TL+ G  + G    A +L   
Sbjct: 307 VTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFV 366

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  +  +PD  T A  +DGL K  F  EA+ +F+ +     +L I  Y+ ++NG+C  G+
Sbjct: 367 MHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGK 426

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           L  A +LF  L  KG   DVVT + MI+ LCKEG +D A DLL+ ME   C P E T+  
Sbjct: 427 LNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNV 486

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
            ++G ++  + SK    L  M   K   ++ + +  +++  S +K+ R
Sbjct: 487 FVQGLLRRYEISKSTKYLMFMKG-KGFRANATTTKLLINYFSANKENR 533



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 189/380 (49%), Gaps = 15/380 (3%)

Query: 40  HFKDGTSIAKFLNDRHKSGNIT--------SNEAVYFFDCMIKMKPSPGMTSFTILLTML 91
           H KD      + +DR+  G I         S+ A+ +   M +   +  +T+++ ++  L
Sbjct: 121 HLKD----MGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGL 176

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
            K+      + LF ++   G+ P+LF  N LI+ LC       A  +L  ++R    P+ 
Sbjct: 177 CKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDV 236

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            TFN +       G I  A  +F  +     + NVVT+N++I   C       A+++F+ 
Sbjct: 237 QTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDL 296

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M+ +    C P++VTYNS+I G C+   ++KA   L +M +  ++P+V+T+++LI GFC 
Sbjct: 297 MIRKG---CLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCK 353

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
                 AK LF  M  +G  PD+ T   +++   K     +   L   + +   + D + 
Sbjct: 354 AGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIII 413

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y+ +++G C  G+++ A ELF  + SKG + DV +YNI+IN  CK+  ++DA  L  +M 
Sbjct: 414 YSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKME 473

Query: 392 SERIRPSVITYNTLLSGLFQ 411
                P   TYN  + GL +
Sbjct: 474 ENGCPPDECTYNVFVQGLLR 493



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 103/224 (45%)

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           V  +  A + +  MV+      V  +N+L     K +    A+ L + M    ++P+V T
Sbjct: 4   VKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVST 63

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +N +++ L ++ +      ++  M    V P   TF T ++GLC  G V +A++    ++
Sbjct: 64  HNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLK 123

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +   E    T   +INGLCK+G    A     +++ +    DV   S ++  LCK+G + 
Sbjct: 124 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVF 183

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +A DL   M  K   P+  T+  L+ G    ++  +   LL  M
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANM 227



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 83/193 (43%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + V+ A+  Y +M++ +  P V  +N L   + ++ +   A+ LI  M    V P+  T 
Sbjct: 5   KSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTH 64

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I+ LC+    +    V   +     E  I T+  ++NGLC  G +  A +    L+ 
Sbjct: 65  NIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKD 124

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G   D  T   +I+ LCK G    A   L  ME +NC      +  ++ G  ++    +
Sbjct: 125 MGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFE 184

Query: 558 VVVLLHKMAAEKL 570
            + L  +M  + +
Sbjct: 185 ALDLFSQMTGKGI 197



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 62/132 (46%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F  + KM     +  ++I+L  +  + + +  + LF  L+S G+  D+   N++
Sbjct: 393 SEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIM 452

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LCK G+   A  +L ++  +   P+  T+N  + GL     I ++ +    +     
Sbjct: 453 INGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGF 512

Query: 183 DPNVVTFNTLIN 194
             N  T   LIN
Sbjct: 513 RANATTTKLLIN 524


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 204/606 (33%), Positives = 314/606 (51%), Gaps = 44/606 (7%)

Query: 32  PKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTML 91
           PK  +SS  F          N R ++     ++AV  F+ M+++ P P  + F  LL  +
Sbjct: 10  PKFSISSRFFGHFQPQNPHKNCRFRN----VDDAVTCFNRMVRVFPPPPTSVFDKLLGAI 65

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
            +   Y T +SLF +L S G+ P +    +LINC      T+ AF +L  IL+S + PN 
Sbjct: 66  VRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNL 125

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           VTFN +ING C  G I +A    + L       +  T+ TLINGL +      AL L +E
Sbjct: 126 VTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQE 185

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M     +  +P++V Y+++IDGLCKDGFV  A  L  Q+ +R I  + +TYNSLI G C 
Sbjct: 186 MEK---SSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCS 242

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
           V  W+E   L  +M+   V PD  TFN +I+  CK+G++ +   +L +M +RG  PD VT
Sbjct: 243 VGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YN+LM+G+C    +  ARELF  MV +G   DV +YN+LI+  CK + V++A+ L++E+ 
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
           ++ + P++ +YN+L+ GL   G +    KL+D+M  +   PD  T+   ID LCK G +L
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422

Query: 452 EAVQV---------------FQAIRNCKC--------------------ELRIETYNCLI 476
           EA+ V               + A+ +  C                    E  I  YN LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           NG CK   +  A  LF  ++HK  IPD+ + +++I  LC  G++    +LL +M      
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS 542

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           P  +T+  LL  F +     K + L  ++   + +  D   +  +VD L K +K +   +
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQIV--EGIWPDFYTNHAIVDNLCKGEKLKMAED 600

Query: 597 QFRHLL 602
             +HLL
Sbjct: 601 ALKHLL 606



 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 171/536 (31%), Positives = 283/536 (52%), Gaps = 6/536 (1%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           L+  +  D  +    +N   K+G I +  A++    M K    P +  ++ L+  L K+ 
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKA--ALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
                + L  ++   G+  D    N LI+  C +G       +L +++R    P+  TFN
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+ LC EGRI+EA  +   ++     P++VT+N L+ G C   N   A +LF  MV  
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                +PDV+ YN +IDG CK   VD+A  L  ++ ++N+ P + +YNSLI G C     
Sbjct: 330 G---LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
              K L  EM  +   PDVVT+N +I+  CK+G++ +   +L +M+++GV P+ VTYN++
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           MDG+CL   ++ A+++F  MV  G   D+ +YN+LIN  CK + V++A+ L++EM  + +
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P + +YN+L+ GL  +G +    +L+D+M  +   PD  T+   +D  CK     +A+ 
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +F+ I          T + +++ LCK  +LK A      L   G  P+V T + +I+ LC
Sbjct: 567 LFRQIVEGIWP-DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           K+G   +A  LL  ME  +  P  +TF  ++   +Q N+  K   L  +M A  LV
Sbjct: 626 KDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 181/532 (34%), Positives = 301/532 (56%), Gaps = 25/532 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M++ +P P +  F  L+ ++ +  + D V+SL +++    +  + +   +L
Sbjct: 60  EDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTIL 119

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + C C       A    G+I +  F P  VTF+ L++GLC E RI EA  LF ++    C
Sbjct: 120 MKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----C 175

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVVTF TL+NGLCR    + A+ L + M+ +     +P+ +TY +I+DG+CK G    
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDG---LQPNQITYGTIVDGMCKMGDTVS 232

Query: 243 AKELLLQMKD-RNINPNVITY-----NSLICGFCCVDDWKEAKCLFIEMMD-NGVQPDVV 295
           A  LL +M++  +I PNV+ +       +I GFC    W EA+ L  EM++   + PDVV
Sbjct: 233 ALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVV 292

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+NA+IN   K+GK  +   L + M+ RG+ P T+TY+S++DGFC   R+  A  +F  M
Sbjct: 293 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLM 352

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            +KGC  D+ ++N LI   C+ ++V+D + L  EM    +  + ITY TL+ G  QVG+L
Sbjct: 353 ATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 412

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK----------- 464
             A  L+ +M  + V P+  T  T +DGLC NG + +A+++F+A++  K           
Sbjct: 413 NAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNG 472

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            E  ++TYN LI+GL   G+   A +L+  + H+G +PD +T +++IH LCK+ ++D+A 
Sbjct: 473 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEAT 532

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            +   M +K+  P+ VTF TL+ G+ +  +    + L  +M    +V + ++
Sbjct: 533 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 584



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/487 (31%), Positives = 248/487 (50%), Gaps = 25/487 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F  M K    P + +FT L+  L +  +    V+L  R+  +GL P+      +
Sbjct: 165 SEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTI 220

Query: 123 INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNF-----LINGLCAEGRIMEAARLFKK 176
           ++ +CKMG T  A  +L ++   S   PN V +       +ING C+ GR  EA +L ++
Sbjct: 221 VDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQE 280

Query: 177 -LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            L      P+VVT+N LIN   +      A +L++EM+   G I  P  +TY+S+IDG C
Sbjct: 281 MLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GII--PSTITYSSMIDGFC 337

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   +D A+ +   M  +  +P++IT+N+LI G+C      +   L  EM + G+  + +
Sbjct: 338 KQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 397

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+  C+ G ++    LL+ M+  GV P+ VT N+L+DG C  G++  A E+F +M
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457

Query: 356 VSK-----------GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
                         G   DV +YNILI+    + K  +A  LY EM    I P  ITYN+
Sbjct: 458 QKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNS 517

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           ++ GL +   L +A ++ D M      P+  TF T I+G CK G V + +++F  +    
Sbjct: 518 VIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 577

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                 TY  LI+G  K+G +  A  +F  +   G  PD +T   M+  L  + ++ +A 
Sbjct: 578 IVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAV 637

Query: 525 DLLLDME 531
            +L D++
Sbjct: 638 AMLEDLQ 644



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 192/378 (50%), Gaps = 15/378 (3%)

Query: 63  NEAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +EA      M++ K  SP + ++  L+    K  ++     L+  +   G+ P     + 
Sbjct: 272 SEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSS 331

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+  CK      A  +   +     +P+ +TFN LI G C   R+ +  +L  ++    
Sbjct: 332 MIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 391

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              N +T+ TLI+G C+  +   A  L +EMV+    +C P+VVT N+++DGLC +G + 
Sbjct: 392 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSS--GVC-PNVVTCNTLLDGLCDNGKLK 448

Query: 242 KAKELLLQMKDR-----------NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
            A E+   M+              + P+V TYN LI G      + EA+ L+ EM   G+
Sbjct: 449 DALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 508

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PD +T+N++I+  CK  ++D+  ++ + M  +  +P+ VT+ +L++G+C  GR+    E
Sbjct: 509 VPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 568

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF  M  +G   +  +Y  LI+   K   +  A+ +++EM++  + P  IT   +L+GL+
Sbjct: 569 LFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLW 628

Query: 411 QVGNLGDALKLIDKMQLN 428
               L  A+ +++ +Q++
Sbjct: 629 SKEELKRAVAMLEDLQMS 646



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 189/395 (47%), Gaps = 50/395 (12%)

Query: 198 RTRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           + R+    +K  E+ ++ FG + +    P V+ +  ++  + + G +D    L  +M+ R
Sbjct: 48  KLRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMR 107

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            +  N  ++  L+  FC       A   F                         GK+ K+
Sbjct: 108 RVPCNAYSFTILMKCFCSCSKLPFALSTF-------------------------GKITKL 142

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
                     G +P  VT+++L+ G C+  RIS A +LF  M    C+ +V ++  L+N 
Sbjct: 143 ----------GFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNG 188

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ-LNDVVP 432
            C++ +V +AV L   ML + ++P+ ITY T++ G+ ++G+   AL L+ KM+ ++ + P
Sbjct: 189 LCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKP 248

Query: 433 DSFTFAT-----YIDGLCKNGFVLEAVQVFQA-IRNCKCELRIETYNCLINGLCKMGRLK 486
           +   +        I+G C +G   EA Q+ Q  +   K    + TYN LIN   K G+  
Sbjct: 249 NVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFF 308

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +L+  +  +G IP  +T S+MI   CK+ ++D A  +   M  K C P  +TF TL+
Sbjct: 309 EAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLI 368

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            G+ +  +    + LLH+M    LV + ++ ++ +
Sbjct: 369 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 403



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 10/274 (3%)

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L  GF  +  +  A +LF  MV       V  +  L+    +  +++  + L+R+M   R
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           +  +  ++  L+        L  AL    K+      P   TF+T + GLC    + EA+
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +F  +    C+  + T+  L+NGLC+ GR+  A  L  R+   G  P+ +T  T++  +
Sbjct: 169 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR------GFVQNNKKSKVVVLLHKMAAE 568
           CK G    A +LL  ME  + +   V    L R      GF  + + S+   LL +M   
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLER 284

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           K +  D+   + +++   K+ K+ E    +  +L
Sbjct: 285 KKISPDVVTYNALINAFVKEGKFFEAEELYDEML 318



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 61/154 (39%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   ++ M      P   ++  ++  L K  + D    +F  + S    P++     LI
Sbjct: 495 EAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 554

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  CK G       +   + R     N +T+  LI+G    G I  A  +F+++      
Sbjct: 555 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVY 614

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           P+ +T   ++ GL        A+ + E++    G
Sbjct: 615 PDTITIRNMLTGLWSKEELKRAVAMLEDLQMSVG 648


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 183/527 (34%), Positives = 294/527 (55%), Gaps = 4/527 (0%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           +SI  F    HK     +N    F   ++   P+P    F  +L+ L K K + T +SL 
Sbjct: 26  SSIRLFSQLHHKQDE-ENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLH 84

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
           +++  NG+  D F  N+LINC  ++G+ S +F +  +IL+  + P  +TFN LI GLC +
Sbjct: 85  QQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLK 144

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           G I +A     K+       + V++ TLINGLC+      AL+L + +    G + +P+ 
Sbjct: 145 GHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD---GKLVQPNA 201

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           V YN IID +CK   V+ A +L  QM  + I P+V TYN+LI GF  V     A  LF +
Sbjct: 202 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNK 261

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M    + P+V TFN +++  CK+GK++    +L +M++  + PD VTYNSLMDG+C + +
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINK 321

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +++A+++F SM S G   +V  Y  ++N  CK + V++A+ L+ EM   +I P+V+TY++
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSS 381

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ GL ++G +  ALKL+D+M      P+  T+++ +D LCKN  V +A+ +   +++  
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + TY  LI GLC+ GRL+ A  +F  L  KG   DV   + MI   C +G  DKA 
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            LL  ME   C+P+  T+  ++    + ++      LL +M    L+
Sbjct: 502 ALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  331 bits (848), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 186/528 (35%), Positives = 296/528 (56%), Gaps = 39/528 (7%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T ++A+  F  M+ M P P +  F  LLT +AK K Y TV+SL K+++S G+ PD++   
Sbjct: 36  TLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVY--- 92

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
                                           T   +IN  C   R+  A  +  K+   
Sbjct: 93  --------------------------------TLTIVINSFCHLNRVDFALSVLAKILKL 120

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+  TF TL+ GLC       AL +F++MV E     +P+VVTY ++++GLCKD  +
Sbjct: 121 GHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG---FQPNVVTYGTLMNGLCKDRQL 177

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  L  +M  + I+P++ TYNSLI   C + +WK    L  EM+ + + P+VV+ N +
Sbjct: 178 TEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIV 237

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+GK+ + + ++++MIQ GV PD VTY +LMDG CL   +  A ++F  MV  GC
Sbjct: 238 VDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGC 297

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V SYN LIN  CK Q+++ A+ L+ EM  + + P+ +TY+TL+ GL  VG L DA+ 
Sbjct: 298 VCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIA 357

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L ++M     +P+  T++  +D LCKN  + EA+ + +AI     +  ++ YN  I+G+C
Sbjct: 358 LFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMC 417

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G L+ A  LF  L  +G  PDV T + MI  LCK G +D+A+ L  +M+   C+ +  
Sbjct: 418 RAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGC 477

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           T+ T+ +G +QNNK S+ + LL +M A     +D+S ++ +V +LS D
Sbjct: 478 TYNTITQGLLQNNKTSRAIQLLEEMLARGF-SADVSTTALLVKMLSDD 524



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 1/214 (0%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           ++DA+  +  ML     P +  +  LL+ + ++ +    L L  KM    + PD +T   
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+  C    V  A+ V   I     +    T+  L+ GLC +G++  A  +F ++  +G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P+VVT  T+++ LCK+ Q+ +A +L  +M AK   P   T+ +L+       +   V 
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            LL++M   K++ + +SL+  VVD L K+ K  E
Sbjct: 217 TLLNEMVKSKIMPNVVSLNI-VVDALCKEGKVTE 249


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 181/541 (33%), Positives = 306/541 (56%), Gaps = 38/541 (7%)

Query: 60  ITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
           I  ++AV  F  M+K +P P +  F  LL+ +AK  +++ V+SL +++ + G+  DL+  
Sbjct: 62  IKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-- 177
           ++ INC C+    S A  VL ++++  + P+ VT + L+NG C   RI +A  L  ++  
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181

Query: 178 -----NVF----------------------------ACDPNVVTFNTLINGLCRTRNTLV 204
                + F                             C P++VT+ T++NGLC+  +  +
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL L ++M  E G I + DVV YN+IIDGLCK   +D A  L  +M ++ I P+V TY+S
Sbjct: 242 ALSLLKKM--EKGKI-EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI   C    W +A  L  +M++  + P+VVTF+A+I+   K+GK+ +  +L + MI+R 
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           ++PD  TY+SL++GFC+  R+  A+ +F  M+SK C  +V +Y+ LI   CK ++VE+ +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+REM    +  + +TY TL+ G FQ  +  +A  +  +M    V P+  T+   +DGL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           CKNG + +A+ VF+ ++    E  I TYN +I G+CK G+++   +LF  L  KG  P+V
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +  +TMI   C++G  ++A+ LL  M+    +P+  T+ TL+R  +++  +     L+ +
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598

Query: 565 M 565
           M
Sbjct: 599 M 599



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 216/402 (53%), Gaps = 3/402 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EAV   D M++    P + ++  ++  L K    D  +SL K++    +  D+ + N 
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+ LCK      A  +   +      P+  T++ LI+ LC  GR  +A+RL   +    
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +PNVVTF+ LI+   +    + A KL++EM+        PD+ TY+S+I+G C    +D
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR---SIDPDIFTYSSLINGFCMHDRLD 380

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +AK +   M  ++  PNV+TY++LI GFC     +E   LF EM   G+  + VT+  +I
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   +    D    + + M+  GV+P+ +TYN L+DG C  G++++A  +F  +      
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+Y+YNI+I   CK  KVED   L+  +  + + P+VI YNT++SG  + G+  +A  L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           + KM+ +  +P+S T+ T I    ++G    + ++ + +R+C
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 211/383 (55%), Gaps = 5/383 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G+I  + A+     M K K    +  +  ++  L K K  D  ++LF  +++ G+ PD
Sbjct: 235 KRGDI--DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F  + LI+CLC  G  S A  +L  ++     PN VTF+ LI+    EG+++EA +L+ 
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++   + DP++ T+++LING C       A  +FE M+++    C P+VVTY+++I G C
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK---DCFPNVVTYSTLIKGFC 409

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   V++  EL  +M  R +  N +TY +LI GF    D   A+ +F +M+  GV P+++
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +++  CK+GK+ K   + E + +  + PD  TYN +++G C  G++    ELF ++
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             KG   +V +YN +I+  C+    E+A  L ++M  +   P+  TYNTL+    + G+ 
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589

Query: 416 GDALKLIDKMQLNDVVPDSFTFA 438
             + +LI +M+      D+ T  
Sbjct: 590 EASAELIKEMRSCGFAGDASTIG 612



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 197/376 (52%), Gaps = 4/376 (1%)

Query: 200 RNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           RN L  +   ++ V+ FG + K    P +V +N ++  + K    +    L  QM+   I
Sbjct: 55  RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           + ++ TY+  I  FC       A  +  +MM  G +PD+VT ++++N  C   ++     
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L++ M++ G  PDT T+ +L+ G  L  + S A  L   MV +GC+ D+ +Y  ++N  C
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K   ++ A+ L ++M   +I   V+ YNT++ GL +  ++ DAL L  +M    + PD F
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+++ I  LC  G   +A ++   +   K    + T++ LI+   K G+L  A KL+  +
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             +   PD+ T S++I+  C   ++D+A  +   M +K+C P+ VT+ TL++GF +  + 
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414

Query: 556 SKVVVLLHKMAAEKLV 571
            + + L  +M+   LV
Sbjct: 415 EEGMELFREMSQRGLV 430


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 180/494 (36%), Positives = 285/494 (57%), Gaps = 22/494 (4%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   F  +++  P+P    F  +L  L K+K Y TV+SL +++   G+ P LF      
Sbjct: 59  DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHF---- 114

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
                         ++G      + PNT+TF  LI GLC +G+I +A      +      
Sbjct: 115 ---------QHPHQLMG------YHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            + V + TLI+GLC+   T  AL L   +    G + +P+VV Y++IIDG+CKD  V+ A
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVD---GNLVQPNVVMYSTIIDGMCKDKHVNDA 216

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L  +M  + I+PNV+TY++LI GF  V   K+A  LF +M+   ++PDV TFN +++ 
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CKDGKM +   +  +M+++G+ P+ VTY SLMDG+CLV  +++A+ +  +M  +G   D
Sbjct: 277 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPD 336

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + SYNILI+  CK +KV++A+ L++EM  + I P V+TYN+L+ GL ++G +  ALKL+D
Sbjct: 337 IQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVD 396

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M    V PD  T+++ +D LCKN  V +A+ +   +++      + TY  LI+GLCK G
Sbjct: 397 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGG 456

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           RL+ A  +F  L  KG    V T + MIH  C +G  D+A  LL  M+  +C+P  VT+ 
Sbjct: 457 RLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYE 516

Query: 544 TLLRGFVQNNKKSK 557
            ++R     ++  K
Sbjct: 517 IIIRSLFDKDENDK 530



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 212/382 (55%), Gaps = 3/382 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ F D ++ M        +  L+  L K  +    + L +R++ N + P++ + + +
Sbjct: 144 HQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTI 203

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ +CK    + AF +   ++    +PN VT++ LI+G    G++ +A  LF K+ +   
Sbjct: 204 IDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENI 263

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V TFN L++G C+         +F  M+ +     KP+VVTY S++DG C    V+K
Sbjct: 264 KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG---IKPNVVTYCSLMDGYCLVKEVNK 320

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK +L  M  R +NP++ +YN LI GFC +    EA  LF EM    + PDVVT+N++I+
Sbjct: 321 AKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLID 380

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK GK+    +L++ M  RGV PD +TY+S++D  C   ++ +A  L   +  +G R 
Sbjct: 381 GLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRP 440

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++Y+Y ILI+  CK  ++EDA  ++ ++L +    +V TY  ++ G    G   +AL L+
Sbjct: 441 NMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALL 500

Query: 423 DKMQLNDVVPDSFTFATYIDGL 444
            KM+ N  +PD+ T+   I  L
Sbjct: 501 SKMKDNSCIPDAVTYEIIIRSL 522



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 172/331 (51%), Gaps = 4/331 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   +  M+    SP + +++ L++      Q    + LF ++    + PD++  N+L
Sbjct: 214 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNIL 273

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK G       V   +++    PN VT+  L++G C    + +A  +   ++    
Sbjct: 274 VDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGV 333

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P++ ++N LI+G C+ +    A+ LF+EM ++      PDVVTYNS+IDGLCK G +  
Sbjct: 334 NPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKH---IIPDVVTYNSLIDGLCKLGKISY 390

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L+ +M DR + P++ITY+S++   C      +A  L  ++ D G++P++ T+  +I+
Sbjct: 391 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILID 450

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+++  + + E ++ +G N    TY  ++ GFC  G    A  L   M    C  
Sbjct: 451 GLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIP 510

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           D  +Y I+I +   D+   D     REM++ 
Sbjct: 511 DAVTYEIIIRS-LFDKDENDKAEKLREMITR 540



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 196/431 (45%), Gaps = 87/431 (20%)

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N I Y+S+   F   +D  +A  LF  ++     P  + FN ++    K      V  L 
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 318 ELMIQRGVN----------------PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           + M   G+N                P+T+T+ +L+ G CL G+I +A     ++V+ G +
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 362 HD-----------------------------------VYSYNILINANCKDQKVEDAVCL 386
            D                                   V  Y+ +I+  CKD+ V DA  L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           Y EM+S+ I P+V+TY+ L+SG F VG L DA+ L +KM L ++ PD +TF   +DG CK
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 447 NGFVLEAVQVF-----QAIRN---CKCELR---------------------------IET 471
           +G + E   VF     Q I+      C L                            I++
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 339

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN LI+G CK+ ++  A  LF  + HK  IPDVVT +++I  LCK G++  A  L+ +M 
Sbjct: 340 YNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 399

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
            +   P  +T+ ++L    +N++  K + LL K+  ++ +  ++   + ++D L K  + 
Sbjct: 400 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKL-KDQGIRPNMYTYTILIDGLCKGGRL 458

Query: 592 RECLNQFRHLL 602
            +  N F  LL
Sbjct: 459 EDAHNIFEDLL 469



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 4/228 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A      M +   +P + S+ IL+    K K+ D  ++LFK ++   + PD+   N L
Sbjct: 319 NKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSL 378

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK+G  S A  ++  +      P+ +T++ +++ LC   ++ +A  L  KL     
Sbjct: 379 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+  LI+GLC+      A  +FE+++ +   I    V TY  +I G C  G  D+
Sbjct: 439 RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNIT---VNTYTVMIHGFCNKGLFDE 495

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           A  LL +MKD +  P+ +TY  +I      D+  +A+ L  EM+  G+
Sbjct: 496 ALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLR-EMITRGL 542


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 190/521 (36%), Positives = 292/521 (56%), Gaps = 18/521 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK-QYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + AV  F+ M +++ +P +  F  +LT L K K  Y TV+SL  ++ S G+ PDLF L++
Sbjct: 48  DNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSI 107

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LINC C +G  + AF V  +IL+               GLC  G++ EA      +    
Sbjct: 108 LINCYCHLGQMTFAFSVFAKILKM--------------GLCLNGKVNEALLFHDHVLALG 153

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              N VT+  LINGLC+   T  AL++  ++    G +   +VV Y++IIDGLCKD  V 
Sbjct: 154 FHLNHVTYGILINGLCKMGQTRAALQVLRQIE---GKLVNTNVVMYSTIIDGLCKDKLVT 210

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  L  +M  + I P V+T++SLI GFC V  +K+A  LF EM+   + PD  TFN ++
Sbjct: 211 DAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILV 270

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK+GK+ +   ++ +M++ GV P  VTYN+LMDG+CLV  + +A+ +   +      
Sbjct: 271 DALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVA 330

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  SYNI+IN  CK + V++A+CL+ EM    I P  +TYN+L+ GL + G +  A +L
Sbjct: 331 PNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWEL 390

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +D+M  N +  D  T+ + ID  CKN  V +A+ + + I+    +  + TYN LI+GLCK
Sbjct: 391 VDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCK 450

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G+LK A  +F  L  KG   +  T + MI+ LCKEG  D+A  LL  ME    +P  VT
Sbjct: 451 GGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVT 510

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           + T+++     ++  K   LL +M  + +VV    +   +V
Sbjct: 511 YETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLV 551



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 205/420 (48%), Gaps = 38/420 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+ F D ++ +       ++ IL+  L K  Q    + + +++    +  ++ + + +
Sbjct: 140 NEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTI 199

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK  + + A+ +   ++     P  VTF+ LI G C  G+  +A RLF ++ +   
Sbjct: 200 IDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNI 259

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+  TFN L++ LC+      A  +   M+ E     +P VVTYN+++DG C    V K
Sbjct: 260 NPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEG---VEPTVVTYNTLMDGYCLVNEVGK 316

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP---------- 292
           AK +L  +    + PN  +YN +I GFC +    EA CLF EM   G+ P          
Sbjct: 317 AKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLID 376

Query: 293 -------------------------DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                                    D+VT+N++I+  CK+  +DK   L++ + + G+ P
Sbjct: 377 GLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQP 436

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           +  TYN L+DG C  G++  A+++F  ++ KG   + ++YNI+IN  CK+   ++A  L 
Sbjct: 437 NMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLL 496

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            +M    I P  +TY T++  LF       A KL+ +M +  VV  +F     + G   N
Sbjct: 497 SKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLN 556



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 201/418 (48%), Gaps = 53/418 (12%)

Query: 222 PDVVTYNSIIDGLCK-DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           P +V +N I+  L K          L  QM+ + + P++ T + LI  +C +     A  
Sbjct: 64  PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFS 123

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +F +++  G+              C +GK+++     + ++  G + + VTY  L++G C
Sbjct: 124 VFAKILKMGL--------------CLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLC 169

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
            +G+   A ++   +  K    +V  Y+ +I+  CKD+ V DA  LY EM+ +RI P+V+
Sbjct: 170 KMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVV 229

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T+++L+ G   VG   DA +L ++M + ++ PD++TF   +D LCK G + EA  V   +
Sbjct: 230 TFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVM 289

Query: 461 RNCKCELRIETYNCL-----------------------------------INGLCKMGRL 485
                E  + TYN L                                   ING CK+  +
Sbjct: 290 MKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMV 349

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE-VTFCT 544
             A  LFH +  +G  P  VT +++I  LCK G++  A +L+ +M   NC+P++ VT+ +
Sbjct: 350 DEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMH-NNCIPADIVTYNS 408

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           L+  F +N    K + L+ K+  E  +  ++   + ++D L K  + +   + F+ LL
Sbjct: 409 LIDVFCKNQHVDKAIALVKKI-KEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLL 465


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 186/554 (33%), Positives = 312/554 (56%), Gaps = 14/554 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            +EA   F  M      P + S+T L+    ++ +++    LF  +   G+  D+   ++
Sbjct: 137 EDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSM 196

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+ LCK G    A  +L  +++     + VT++ LI GLC + RI EA RLF  +    
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLG 256

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---FGAICKPDVVTYNSIIDGLCKDG 238
           C P+ + + TL+ GLC+T N   AL+L +EM+N+   +G  CKP +++Y+ IIDGLCKD 
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 316

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
             D+A+EL  +MK + I P+VI+Y +LI GFC    W++AKCLF EM+D G+QPDV T +
Sbjct: 317 REDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS 376

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I+  CK GK+ + N+LLE++IQRG  PD VT  +L+ G C+  RIS+A +LF+ M   
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 436

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE------RIRPSVITYNTLLSGLFQV 412
           GC  +V +   L+   C+   ++ A+ L++ MLS+        +P+ I+Y+ ++ GL + 
Sbjct: 437 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC 496

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G   +A +L  +M+   V+PD  ++ + I G C++G   +A  +F  + +   +  + T+
Sbjct: 497 GREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTF 556

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           + LI+ LCK G++  A +L   +  +G IP+ VT +T++  LC   ++ +A  L + M+ 
Sbjct: 557 SVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 616

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS-----DLSLSSKVVDLLSK 587
             C+P  VT+ TL++G  Q       + L  KM ++          D+   S ++D L K
Sbjct: 617 LGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCK 676

Query: 588 DKKYRECLNQFRHL 601
             +  E    F+ +
Sbjct: 677 HGREDEARELFKEM 690



 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 176/463 (38%), Positives = 280/463 (60%), Gaps = 10/463 (2%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+ PD+    +LI+  CK G    A  +L  +++     + VT++ LI GLC + RI EA
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN---EFGAICKPDVVTY 227
            +LF  +    C P+ + + TL+ GLC+T    +AL L +EM+N   ++G  CKP +V+Y
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           + IIDGLCKD   D+A+EL  +MK + + P+VI+Y SLI GFC    W++AKCLF EM+D
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G++ DV T + +I+  CK+GK+ + N LLE+MIQRG   D VTY++L+ G C+  RIS 
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISE 244

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE------RIRPSVIT 401
           A  LF+SM   GCR D  +Y  L+   C+   +  A+ L++EML++      + +P++I+
Sbjct: 245 ATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLIS 304

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+ ++ GL +     +A +L  +M+   ++PD  ++ T I G C +G   +A  +F  + 
Sbjct: 305 YSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 364

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +   +  + T + LI+ LCK G++  A KL   +  +G IPDVVTC+T++  LC + ++ 
Sbjct: 365 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRIS 424

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           KA  L L M+   C+P+ VT  TL++G  Q+    K+ + LHK
Sbjct: 425 KATQLFLKMQKLGCMPNVVTCATLMKGLCQSG-NIKIALELHK 466



 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 166/444 (37%), Positives = 266/444 (59%), Gaps = 11/444 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            +EA   F  M      P + S+T L+     + +++    LF  +   G+ PD+   ++
Sbjct: 318 EDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 377

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+ LCK G    A  +L  +++    P+ VT   L+ GLC + RI +A +LF K+    
Sbjct: 378 LIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 437

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---FGAICKPDVVTYNSIIDGLCKDG 238
           C PNVVT  TL+ GLC++ N  +AL+L + M+++   +G  CKP+ ++Y+ IIDGLCK G
Sbjct: 438 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 497

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
             D+A+EL  +MK   + P+VI+Y SLI GFC    WK+AK LF EM+D GVQPDV TF+
Sbjct: 498 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 557

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I+  CK+GK+ + N LLE+MIQRG  P+TVTY +L+ G C+  RIS A +LF+ M   
Sbjct: 558 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 617

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE------RIRPSVITYNTLLSGLFQV 412
           GC  DV +Y  L+   C+   ++ A+ L+++MLS+        +P VI+Y+ ++ GL + 
Sbjct: 618 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 677

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G   +A +L  +M+   V+P+  ++ + I G C++G + +A  +F  + +   +L   TY
Sbjct: 678 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 737

Query: 473 NCLINGLCKMGRLKTACKLFHRLQ 496
           + +I+G CK G++  A  LF +++
Sbjct: 738 SVMIHGFCKEGQIDKA--LFQKME 759



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 169/509 (33%), Positives = 265/509 (52%), Gaps = 27/509 (5%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIK------MKPSPGMTSFTILLTMLAKNKQ 96
           D  +    +    ++GNI  N A+     M+       +K  P + S++I++  L K+++
Sbjct: 260 DAIAYGTLMKGLCQTGNI--NTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 317

Query: 97  YDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNF 156
            D    LFK + + G+ PD+     LI+  C  G    A  +   +L     P+  T + 
Sbjct: 318 EDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 377

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           LI+ LC +G+++EA +L + +    C P+VVT  TL+ GLC       A +LF +M  + 
Sbjct: 378 LIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKM-QKL 436

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR------NINPNVITYNSLICGFC 270
           G  C P+VVT  +++ GLC+ G +  A EL   M         N  PN I+Y+ +I G C
Sbjct: 437 G--CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 494

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                 EA+ LF EM   GV PDV+++ ++I+  C+ GK      L   M+  GV PD  
Sbjct: 495 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 554

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           T++ L+D  C  G++  A EL   M+ +GC  +  +Y  L+   C + ++ +A  L+ +M
Sbjct: 555 TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 614

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV-------VPDSFTFATYIDG 443
                 P V+TY TL+ GL Q GN+  AL+L  KM L+D         PD  +++  IDG
Sbjct: 615 QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM-LSDTGQYGTNFKPDVISYSIIIDG 673

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LCK+G   EA ++F+ ++       + +Y  LI+G C+ G+L+ A  LF+ +  +G   +
Sbjct: 674 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 733

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
            VT S MIH  CKEGQ+DKA  L   MEA
Sbjct: 734 AVTYSVMIHGFCKEGQIDKA--LFQKMEA 760



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 165/555 (29%), Positives = 284/555 (51%), Gaps = 25/555 (4%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D T+ +  ++   K G +   EA    + MI+      + +++ L+  L    +      
Sbjct: 190 DVTTSSMLIDILCKEGKVI--EANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATR 247

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV-------LGRILRSCFTPNTVTFN 155
           LF  +   G  PD      L+  LC+ G  + A  +        GR    C  P  ++++
Sbjct: 248 LFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC-KPTLISYS 306

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I+GLC + R  EA  LFK++      P+V+++ TLI+G C +     A  LF EM++ 
Sbjct: 307 IIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD- 365

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                +PDV T + +ID LCK G V +A +LL  +  R   P+V+T  +L+ G C     
Sbjct: 366 --VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRI 423

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ----RGVN--PDT 329
            +A  LF++M   G  P+VVT   ++   C+ G +     L + M+      G+N  P+ 
Sbjct: 424 SKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNA 483

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           ++Y+ ++DG C  GR   ARELF  M + G   DV SY  LI+  C+  K +DA  L+ E
Sbjct: 484 ISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 543

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M+   ++P V T++ L+  L + G + +A +L++ M     +P++ T+ T + GLC N  
Sbjct: 544 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 603

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR-LQHKGPI-----PD 503
           + EA Q+F  ++   C   + TY  L+ GLC+ G +KTA +L  + L   G       PD
Sbjct: 604 ISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPD 663

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           V++ S +I  LCK G+ D+A +L  +M+A   +P+ +++ +L+ GF ++ K      L +
Sbjct: 664 VISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 723

Query: 564 KMAAEKLVVSDLSLS 578
           +M  + + ++ ++ S
Sbjct: 724 EMVDQGVQLNAVTYS 738



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 269/523 (51%), Gaps = 23/523 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR-LNSNGLF-----PDL 116
           +EA   F  M K+   P   ++  L+  L +    +T + L +  LN  G +     P L
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL 302

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              +++I+ LCK      A  +   +      P+ +++  LI+G C  G+  +A  LF +
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P+V T + LI+ LC+    + A KL E ++      C PDVVT  +++ GLC 
Sbjct: 363 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG---CIPDVVTCTTLVKGLCM 419

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN----GV-- 290
              + KA +L L+M+     PNV+T  +L+ G C   + K A  L   M+ +    G+  
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
           +P+ ++++ +I+  CK G+ D+   L + M   GV PD ++Y SL+ GFC  G+   A+ 
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF  MV  G + DV ++++LI+  CK+ KV +A  L   M+     P+ +TY TL+ GL 
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL--- 467
               + +A +L  KMQ    +PD  T+ T + GLC+ G +  A+++ + + +   +    
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659

Query: 468 ---RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + +Y+ +I+GLCK GR   A +LF  ++  G IP+V++ +++IH  C+ G+++ A 
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            L  +M  +    + VT+  ++ GF +  +  K   L  KM A
Sbjct: 720 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDK--ALFQKMEA 760



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 162/548 (29%), Positives = 275/548 (50%), Gaps = 22/548 (4%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    + M++      + +++ L+  L    +      LF  +   G  PD      L+
Sbjct: 28  EANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 87

Query: 124 NCLCKMGITSGAFVVLGRILRSCFT------PNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             LC+ G  + A  +   +L           P  V+++ +I+GLC + R  EA  LFK++
Sbjct: 88  KGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEM 147

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P+V+++ +LI+G CR+     A  LF EM++      + DV T + +ID LCK+
Sbjct: 148 KAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD---VGIRSDVTTSSMLIDILCKE 204

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G V +A ELL  M  R    +++TY++LI G C      EA  LF+ M   G +PD + +
Sbjct: 205 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAY 264

Query: 298 NAMINYNCKDGKMDKVNRLLELMI----QRGV--NPDTVTYNSLMDGFCLVGRISRAREL 351
             ++   C+ G ++   +L + M+    + G+   P  ++Y+ ++DG C   R   AREL
Sbjct: 265 GTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 324

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M ++G   DV SY  LI+  C   K E A CL+ EML   I+P V T + L+  L +
Sbjct: 325 FKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK 384

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G + +A KL++ +     +PD  T  T + GLC    + +A Q+F  ++   C   + T
Sbjct: 385 KGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVT 444

Query: 472 YNCLINGLCKMGRLKTACKLF-HRLQHKGPI-----PDVVTCSTMIHWLCKEGQMDKAND 525
              L+ GLC+ G +K A +L  + L    P      P+ ++ S +I  LCK G+ D+A +
Sbjct: 445 CATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARE 504

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           L  +M+A   +P  +++ +L+ GF ++ K      L ++M  +  V  D++  S ++D+L
Sbjct: 505 LFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM-VDIGVQPDVTTFSVLIDML 563

Query: 586 SKDKKYRE 593
            K+ K  E
Sbjct: 564 CKEGKVIE 571



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 180/328 (54%), Gaps = 11/328 (3%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+  G+QPDV T   +I+  CK+GK+ + N LLE+M+QRG   D VTY++L+ G C+  R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE------RIRPS 398
           IS A +LF+SM   GCR D  +Y  L+   C+  K+  A+ L++EML++      + +P+
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           +++Y+ ++ GL +     +A +L  +M+   ++PD  ++ + I G C++G   +A  +F 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            + +      + T + LI+ LCK G++  A +L   +  +G I D+VT ST+I  LC + 
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS----- 573
           ++ +A  L + M+   C P  + + TL++G  Q    +  + L  +M  +          
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            L   S ++D L KD++  E    F+ +
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEM 328


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 181/521 (34%), Positives = 290/521 (55%), Gaps = 4/521 (0%)

Query: 51  LNDRHKSGNITS-NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           + D+ K G+ ++ ++A+ +F+ M+ M P P +T F  LL  L + K YD+VVS+++++  
Sbjct: 73  VRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEF 132

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+   ++ L +LINCLC + +    F VLG+I +  F P+ +TFN LINGLC EGRI+E
Sbjct: 133 FGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVE 192

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A      +      P V T   ++NGLC+   T  A+   ++MV      C+P+VV+Y+ 
Sbjct: 193 AMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVE---LDCEPEVVSYSI 249

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           IID LCK+  V++A +L   M+   I+P V+TYNSLI G C    WK+A  LF EM++  
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN 309

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++PDVVTF+ +++  CK+G + +   +   MIQ  + PD VTY+SL+ G C       + 
Sbjct: 310 MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESS 369

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            L   M+S+  R DV +++I ++  CK   V +A  +   M+   +RP+V+TYN+L+ G 
Sbjct: 370 TLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGY 429

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
                + +A K+ D M      PD  ++   I G CK+  + EA Q+F  + +       
Sbjct: 430 CLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNS 489

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            T+  LI+GLC+ GR   A +LF ++   G  PD++T ST++   CK G +D+A  L   
Sbjct: 490 ITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEA 549

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           ++     P+ V    LL G  +  K      L   ++ E+L
Sbjct: 550 LKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEEL 590



 Score =  291 bits (744), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 159/435 (36%), Positives = 255/435 (58%), Gaps = 7/435 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           + K+   P + +F  L+  L    +    +     + S G  P ++   +++N LCK+G 
Sbjct: 165 IFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGK 224

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           TS A V + +++     P  V+++ +I+ LC    + EA  LF  +      P VVT+N+
Sbjct: 225 TSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNS 284

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI G+C +     A  LF+EM+ E+    KPDVVT++ ++D LCK+G V +A  +  +M 
Sbjct: 285 LIYGMCNSGQWKQASILFKEML-EWNM--KPDVVTFSILVDALCKEGVVLEALSVFGKMI 341

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              + P+++TY+SLI G C    WKE+  L  EM+   ++PDVVTF+  ++  CK G + 
Sbjct: 342 QIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVS 401

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   ++ LMI+RG+ P+ VTYNSLMDG+CL  ++  AR++F  MV+KGC  DV SYNILI
Sbjct: 402 EAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILI 461

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              CK +++++A  L+ EM  + + P+ IT+ TL+SGL Q G    A +L  KM  +   
Sbjct: 462 KGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCP 521

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC--LINGLCKMGRLKTAC 489
           PD  T++T + G CK+G + EA+ +F+A++  K +L+     C  L+ G+CK G+L+ A 
Sbjct: 522 PDLITYSTLLSGFCKHGHLDEALALFEALK--KSQLKPNHVICKILLGGMCKAGKLEDAK 579

Query: 490 KLFHRLQHKGPIPDV 504
           +LF  L  +   PDV
Sbjct: 580 ELFSSLSIEELQPDV 594



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M     +P   + T L++ L +  +      LFK++ S+G  PDL   + L
Sbjct: 471 DEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTL 530

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK G    A  +   + +S   PN V    L+ G+C  G++ +A  LF  L++   
Sbjct: 531 LSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEEL 590

Query: 183 DPNV 186
            P+V
Sbjct: 591 QPDV 594


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 179/469 (38%), Positives = 270/469 (57%), Gaps = 3/469 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  F+ M+ M+P P    F  +L+ L  NK Y TV+SLFK+   NG+ PDL  L++LIN
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
           C C     + AF V   IL+  F PN +T N LI GLC  G I +A     +L       
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + V++ TLINGLC+T  T    +L  ++    G   KPDVV YN+II+ LCK+  +  A 
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLE---GHSVKPDVVMYNTIINSLCKNKLLGDAC 217

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           ++  +M  + I+P+V+TY +LI GFC +   KEA  L  EM    + P+V TFN +I+  
Sbjct: 218 DVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDAL 277

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K+GKM +   LL +M++  + PD  TYNSL+DG+ LV  +  A+ +F SM  +G   DV
Sbjct: 278 SKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDV 337

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y  +IN  CK + V++A+ L+ EM  + + P ++TYN+L+ GL +  +L  A+ L  +
Sbjct: 338 QCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKR 397

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+   + PD +++   +DGLCK+G + +A ++FQ +      L +  Y  LIN LCK G 
Sbjct: 398 MKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGF 457

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
              A  L  +++ KG +PD VT   +I  L ++ + DKA  +L +M A+
Sbjct: 458 FDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIAR 506



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 189/385 (49%), Gaps = 3/385 (0%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P    FN +++ L   ++    + LF++   E   I  PD+ T + +I+  C    +  A
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQF--EPNGIT-PDLCTLSILINCFCHQAHITLA 111

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +   +  R  +PN IT N+LI G C   + K+A     +++  G Q D V++  +IN 
Sbjct: 112 FSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLING 171

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+   V RLL  +    V PD V YN++++  C    +  A +++  M+ KG   D
Sbjct: 172 LCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPD 231

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +Y  LI+  C    +++A  L  EM  + I P+V T+N L+  L + G + +A  L+ 
Sbjct: 232 VVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLA 291

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M    + PD FT+ + IDG      V  A  VF ++        ++ Y  +INGLCK  
Sbjct: 292 VMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTK 351

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A  LF  ++HK  IPD+VT +++I  LCK   +++A  L   M+ +   P   ++ 
Sbjct: 352 MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYT 411

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAE 568
            LL G  ++ +      +  ++ A+
Sbjct: 412 ILLDGLCKSGRLEDAKEIFQRLLAK 436


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  328 bits (840), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 184/524 (35%), Positives = 291/524 (55%), Gaps = 6/524 (1%)

Query: 49  KFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLN 108
           +F    H     T ++ +  F+ M++  P P +  F  LL  + +   Y T +SLF +L+
Sbjct: 23  RFFGHLHPPKFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLH 82

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
           S G+ P +  L +LINC C     S AF +LG IL+  F PN VTFN LING C  G + 
Sbjct: 83  SKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVS 142

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A      L       +  ++ +LINGLC+   T  AL+L ++M  +   + +P+++TY+
Sbjct: 143 KAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEED---LVRPNLITYS 199

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++IDGLCKD  +  A  L   +  R I  +V+ YNSLI G C V  W+EA  L   M+  
Sbjct: 200 TVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRG 259

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
            + PD  TFN +++  CK+G++ +   +  +M++RG  PD VTYN+LM+GFCL   +S A
Sbjct: 260 NINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEA 319

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           RELF  MV +G   DV +YN+LIN  CK   V++A+ L++E+  + + P++ TYN+L+ G
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDG 379

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCEL 467
           L ++G +    +L+D+M      PD  T+  ++D  CK+    +A+ +F Q ++    + 
Sbjct: 380 LCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDF 439

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            +  Y+ ++   CK  +LK A +    L   G  P+V T + MI+ LCK+   D+A  LL
Sbjct: 440 YM--YDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLL 497

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             M+  +C P  VTF T++    + N+  K   L  +M    LV
Sbjct: 498 SKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 91/206 (44%)

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K   V+D +  +  ML +   P +  ++ LL  + ++G+   A+ L  ++    + P   
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T    I+  C    +  A  +   I     +  + T+N LING C  G +  A      L
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             KG   D  +  ++I+ LCK GQ   A  LL  ME     P+ +T+ T++ G  ++   
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +  + L   + +  ++V  ++ +S +
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLI 237



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 1/182 (0%)

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           D L   ++M      P  F F   +  + + G    A+ +F  + +      I T   LI
Sbjct: 38  DTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILI 97

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           N  C    L  A  L   +   G  P++VT +T+I+  C  G + KA    LD+ AK   
Sbjct: 98  NCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYP 157

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
             E ++ +L+ G  +N +    + LL KM  E LV  +L   S V+D L KD+   + L 
Sbjct: 158 LDEFSYGSLINGLCKNGQTRDALQLLQKME-EDLVRPNLITYSTVIDGLCKDRLIADALR 216

Query: 597 QF 598
            F
Sbjct: 217 LF 218


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  327 bits (839), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 178/493 (36%), Positives = 285/493 (57%), Gaps = 4/493 (0%)

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           +G  P+L  ++ L+  +C  G    A  +  ++ RS F  + + + +LIN L    +   
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  L +++    C  N  T+  +I+ LC+    +  LK+F EM+N    IC P+V+ Y+S
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINM--GIC-PNVIVYSS 119

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+GLC+ G + +A  L  +M  + I  NVITYNSLI   C    WKEA   F +M+  G
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEG 179

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           + PDVVTF  +I++  K GK+ +  ++ ELMI++G  P+ VTYNSL++G CL  ++  A 
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAV 239

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            LF  MV +G + DV SYN LIN  C   K E+A+ L+R+M  E + PS+ TY  LL  L
Sbjct: 240 RLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKAL 299

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
           +Q G +  A +L + MQ+    P   T+   +DGLCKNG + EA+ VF+++++ K +  I
Sbjct: 300 YQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSI 359

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
             Y+ LI G+ +  R ++A ++F  +   G +P++VT + MI+ LCKEG++ +A  L + 
Sbjct: 360 RIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQ 419

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           ME   C   E++F  ++RGF+Q N+  K +  L +M  +    +D S++  +V+L + D 
Sbjct: 420 MEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPND-SVTLMLVNLYAADA 478

Query: 590 KYRECLNQFRHLL 602
           +  E  N F H L
Sbjct: 479 QSSELPNNFLHEL 491



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 246/477 (51%), Gaps = 4/477 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  FD M +      +  +  L+  L K +Q    V L +R+ S     + F   L+I
Sbjct: 27  DALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVI 86

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G+      +   ++     PN + ++ LINGLC  G++ EA  LF ++      
Sbjct: 87  DSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIK 146

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            NV+T+N+LI+  CR      A + F +MV E G +  PDVVT+ ++ID L K G V +A
Sbjct: 147 ANVITYNSLIHASCRFGLWKEATRTFSQMVGE-GIL--PDVVTFTTLIDHLSKKGKVQEA 203

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ++   M  +   PN++TYNSL+ G C       A  LF  M++ G++ DV+++N +IN 
Sbjct: 204 YKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLING 263

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C  GK ++   L   M    + P   TY  L+      GRI  A+ELF +M   G    
Sbjct: 264 YCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPS 323

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +Y +L++  CK+  +E+A+ ++R + S + +PS+  Y+ L+ G+FQ      A+++ D
Sbjct: 324 LDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFD 383

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           ++    +VP+  T+   I+GLCK G +LEA ++F  +    CE    ++N +I G  +  
Sbjct: 384 EIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQEN 443

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK-ANDLLLDMEAKNCVPSE 539
           +++ A +   R++ K   P+      +++    + Q  +  N+ L ++  K  + ++
Sbjct: 444 QVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSELPNNFLHELVQKKTLKTQ 500



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 171/353 (48%), Gaps = 40/353 (11%)

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           M +G QP++VT + ++   C +GK+     L + M + G   D + Y  L++      + 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
            RA EL   M+S+ C  + ++Y ++I++ CKD      + ++REM++  I P+VI Y++L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 406 LSGLFQVGNLGDALKLIDKM---------------------------------QL--NDV 430
           ++GL +VG L +A+ L D+M                                 Q+    +
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +PD  TF T ID L K G V EA ++F+ +        I TYN L+NGLC   ++  A +
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           LF  +  +G   DV++ +T+I+  C  G+ ++A  L   M+ +   PS  T+  LL+   
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV--DLLSKDKKYRECLNQFRHL 601
           QN +      L + M   ++     SL +  V  D L K+    E ++ FR L
Sbjct: 301 QNGRIRTAKELFNNM---QICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSL 350



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 147/283 (51%), Gaps = 1/283 (0%)

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           ++ G  P+ VT ++L+ G C  G++  A ELF  M   G + D+  Y  LINA  K ++ 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
             AV L+R MLSE    +  TY  ++  L + G     LK+  +M    + P+   +++ 
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+GLC+ G + EAV +F  + +   +  + TYN LI+  C+ G  K A + F ++  +G 
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           +PDVVT +T+I  L K+G++ +A  +   M  +   P+ VT+ +LL G   +++    V 
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
           L   M    + +  +S ++ +++      K  E +  FR + +
Sbjct: 241 LFEVMVERGIKIDVISYNT-LINGYCTSGKTEEAMTLFRKMQY 282



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 142/290 (48%), Gaps = 6/290 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    ++   K G +   EA   F+ MIK   +P + ++  LL  L  + Q D  V 
Sbjct: 183 DVVTFTTLIDHLSKKGKV--QEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF+ +   G+  D+   N LIN  C  G T  A  +  ++     TP+  T+  L+  L 
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GRI  A  LF  + +    P++ T+  L++GLC+      A+ +F  + +      KP
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKS---IKYKP 357

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            +  Y+ +I G+ +    + A E+  ++    + PN++TYN +I G C      EA+ LF
Sbjct: 358 SIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLF 417

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP-DTVT 331
           ++M ++G + D ++FN +I    ++ ++ K    L+ M ++  +P D+VT
Sbjct: 418 VQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVT 467



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 6/196 (3%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFKDGT-SIAKF---LNDRHKSGNITSNEAVYFFDCMIKMK 76
           N +C+ G+     T      +++ T SI  +   L   +++G I +  A   F+ M    
Sbjct: 262 NGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRT--AKELFNNMQICG 319

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
            SP + ++T+LL  L KN   +  + +F+ L S    P + + ++LI  + +      A 
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAM 379

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +   I      PN VT+N +INGLC EG+++EA RLF ++    C+ + ++FN +I G 
Sbjct: 380 EIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGF 439

Query: 197 CRTRNTLVALKLFEEM 212
            +      A++  + M
Sbjct: 440 LQENQVQKAMEFLKRM 455


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 191/543 (35%), Positives = 295/543 (54%), Gaps = 61/543 (11%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNF-------------- 156
           GLFPD F  N+LINCLC +   +     +  I+R  + P+ VT++               
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 157 ------------------------------LINGLCAEGRIMEAARLFKKLNVFACDPNV 186
                                         LI GLC E RI EA  LF  +    C P+ 
Sbjct: 65  CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNE---FGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           +T+ TL+ GLC+T N  +AL+L +EM+N+   +G  CKP +++Y+ IIDGLCKD   D+A
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +EL  +MK + + P+VI+Y SLI GFC    W++AKCLF EM+D G+QPDV T   +I+ 
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK+GK+ + N LLE+M+ RG   D VTY++L+ G C+  RIS A +LF+SM   GCR D
Sbjct: 245 FCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPD 304

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSER-------IRPSVITYNTLLSGLFQVGNLG 416
             +Y  L+   C+  K+  A+ L++EML++        IRP V T + L+  L + G + 
Sbjct: 305 AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVI 364

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +L++ M     + D  T++T I GLC    + EA  +F +++   C     TY  L+
Sbjct: 365 EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 424

Query: 477 NGLCKMGRLKTACKLFHR-LQHKGPI-----PDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            GLC+ G +  A +L    L   G       P +++ S +I  LCK+ + D+A +L  +M
Sbjct: 425 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEM 484

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           +A+  +P  +++ TL+ GF  + K  K   L ++M  +  +  D++ SS ++D+L K  K
Sbjct: 485 KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM-LDVGIQPDVTTSSVLIDMLCKKGK 543

Query: 591 YRE 593
             E
Sbjct: 544 VIE 546



 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 187/560 (33%), Positives = 313/560 (55%), Gaps = 21/560 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR-LNSNGLF------PD 115
           +EA   F  M K+   P   ++  L+  L +  + +  + L +  LN    +      PD
Sbjct: 287 SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPD 346

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   ++LI+ LCK G    A  +L  +++     + VT++ LI GLC E RI EA  LF 
Sbjct: 347 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 406

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---FGAICKPDVVTYNSIID 232
            +    C P+ +T+ TL+ GLC+T N  +AL+L +EM+N+   +G  CKP +++Y+ IID
Sbjct: 407 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 466

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           GLCKD   D+A+EL  +MK + I P+VI+Y +LI GFC    W++AKCLF EM+D G+QP
Sbjct: 467 GLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP 526

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           DV T + +I+  CK GK+ + N+LLE++IQRG   D VT  +L+ G C+  RIS+A +LF
Sbjct: 527 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLF 586

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE------RIRPSVITYNTLL 406
           + M   GC  +V +   L+   C+   ++ A+ L++ MLS+        +P+ I+Y+ ++
Sbjct: 587 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIII 646

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL + G   +A +L  +M+   V+PD  ++ + I G C++G   +A  +F  + +   +
Sbjct: 647 DGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQ 706

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + T++ LI+ LCK G++  A +L   +  +G IP+ VT +T++  LC   ++ +A  L
Sbjct: 707 PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQL 766

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS-----DLSLSSKV 581
            + M+   C+P  VT+ TL++G  Q       + L  KM ++          D+   S +
Sbjct: 767 FMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSII 826

Query: 582 VDLLSKDKKYRECLNQFRHL 601
           +D L K  +  E    F+ +
Sbjct: 827 IDGLCKHGREDEARELFKEM 846



 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 165/444 (37%), Positives = 266/444 (59%), Gaps = 11/444 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            +EA   F+ M      P + S+T L+     + +++    LF  +   G+ PD+   ++
Sbjct: 474 EDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 533

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+ LCK G    A  +L  +++     + VT   L+ GLC + RI +A +LF K+    
Sbjct: 534 LIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 593

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---FGAICKPDVVTYNSIIDGLCKDG 238
           C PNVVT  TL+ GLC++ N  +AL+L + M+++   +G  CKP+ ++Y+ IIDGLCK G
Sbjct: 594 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 653

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
             D+A+EL  +MK   + P+VI+Y SLI GFC    WK+AK LF EM+D GVQPDV TF+
Sbjct: 654 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I+  CK+GK+ + N LLE+MIQRG  P+TVTY +L+ G C+  RIS A +LF+ M   
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 773

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE------RIRPSVITYNTLLSGLFQV 412
           GC  DV +Y  L+   C+   ++ A+ L+++MLS+        +P VI+Y+ ++ GL + 
Sbjct: 774 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 833

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G   +A +L  +M+   V+P+  ++ + I G C++G + +A  +F  + +   +L   TY
Sbjct: 834 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 893

Query: 473 NCLINGLCKMGRLKTACKLFHRLQ 496
           + +I+G CK G++  A  LF +++
Sbjct: 894 SVMIHGFCKEGQIDKA--LFQKME 915



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 160/471 (33%), Positives = 251/471 (53%), Gaps = 19/471 (4%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           +K  P + S++I++  L K+++ D    LF+ + + G+ PD+     LI+  C  G    
Sbjct: 452 IKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEK 511

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  +   +L     P+  T + LI+ LC +G+++EA +L + +    C  +VVT  TL+ 
Sbjct: 512 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVK 571

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR- 253
           GLC       A +LF +M  + G  C P+VVT  +++ GLC+ G +  A EL   M    
Sbjct: 572 GLCMKHRISKATQLFLKM-QKLG--CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 628

Query: 254 -----NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
                N  PN I+Y+ +I G C      EA+ LF EM   GV PDV+++ ++I+  C+ G
Sbjct: 629 SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG 688

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           K      L   M+  GV PD  T++ L+D  C  G++  A EL   M+ +GC  +  +Y 
Sbjct: 689 KWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYT 748

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L+   C + ++ +A  L+ +M      P V+TY TL+ GL Q GN+  AL+L  KM L+
Sbjct: 749 TLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM-LS 807

Query: 429 DV-------VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           D         PD  +++  IDGLCK+G   EA ++F+ ++       + +Y  LI+G C+
Sbjct: 808 DTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCR 867

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
            G+L+ A  LF+ +  +G   + VT S MIH  CKEGQ+DKA  L   MEA
Sbjct: 868 SGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEA 916



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 285/548 (52%), Gaps = 17/548 (3%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            +EA   F  M      P + S+T L+     + +++    LF  +   G+ PD+    +
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+  CK G    A  +L  ++      + VT++ LI GLC + RI EA +LF  +    
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN---EFGAIC-KPDVVTYNSIIDGLCKD 237
           C P+ + + TL+ GLC+T    +AL L +EM+N   ++G  C +PDV T + +ID LCK+
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G V +A ELL  M  R    +++TY++LI G C      EA  LF+ M   G +PD +T+
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 298 NAMINYNCKDGKMDKVNRLLELMI----QRGV--NPDTVTYNSLMDGFCLVGRISRAREL 351
             ++   C+ G ++   +L + M+    + G+   P  ++Y+ ++DG C   R   AREL
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 480

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M ++G   DV SY  LI+  C   K E A CL+ EML   I+P V T + L+  L +
Sbjct: 481 FEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK 540

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G + +A KL++ +     + D  T  T + GLC    + +A Q+F  ++   C   + T
Sbjct: 541 KGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVT 600

Query: 472 YNCLINGLCKMGRLKTACKLF-HRLQHKGPI-----PDVVTCSTMIHWLCKEGQMDKAND 525
              L+ GLC+ G +K A +L  + L    P      P+ ++ S +I  LCK G+ D+A +
Sbjct: 601 CATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARE 660

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           L  +M+A   +P  +++ +L+ GF ++ K      L ++M  +  V  D++  S ++D+L
Sbjct: 661 LFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM-VDIGVQPDVTTFSVLIDML 719

Query: 586 SKDKKYRE 593
            K+ K  E
Sbjct: 720 CKEGKVIE 727



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/577 (29%), Positives = 286/577 (49%), Gaps = 62/577 (10%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D T+ +  ++   K G +   EA    + MI+      + +++ L+  L    +      
Sbjct: 53  DVTTSSMLIDILCKEGKVI--EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 110

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV-------LGRILRSCFTPNTVTFN 155
           LF  +   G  PD      L+  LC+ G  + A  +        GR    C  P  ++++
Sbjct: 111 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC-KPTLISYS 169

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I+GLC + R  EA  LFK++      P+V+++ +LI+G C +     A  LF EM++ 
Sbjct: 170 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLD- 228

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                +PDV T   +ID  CK+G V +A ELL  M  R    +++TY++LI G C     
Sbjct: 229 --VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRI 286

Query: 276 KEAKCLFIEMMDNG------------------------------------------VQPD 293
            EA  LF+ M   G                                          ++PD
Sbjct: 287 SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPD 346

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           V T + +I+  CK+GK+ + N LLE+MIQRG   D VTY++L+ G C+  RIS A  LF+
Sbjct: 347 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 406

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE------RIRPSVITYNTLLS 407
           SM   GCR D  +Y  L+   C+   +  A+ L++EML++      + +P++I+Y+ ++ 
Sbjct: 407 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 466

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GL +     +A +L ++M+   ++PD  ++ T I G C +G   +A  +F  + +   + 
Sbjct: 467 GLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP 526

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + T + LI+ LCK G++  A KL   +  +G I DVVTC+T++  LC + ++ KA  L 
Sbjct: 527 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLF 586

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           L M+   C+P+ VT  TL++G  Q+    K+ + LHK
Sbjct: 587 LKMQKLGCMPNVVTCATLMKGLCQSG-NIKIALELHK 622



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 268/523 (51%), Gaps = 23/523 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR-LNSNGLF-----PDL 116
           +EA + F  M K+   P   ++  L+  L +    +  + L +  LN  G +     P L
Sbjct: 399 SEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTL 458

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              +++I+ LCK      A  +   +      P+ +++  LI+G C  G+  +A  LF +
Sbjct: 459 ISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 518

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P+V T + LI+ LC+    + A KL E ++      C  DVVT  +++ GLC 
Sbjct: 519 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG---CILDVVTCTTLVKGLCM 575

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN----GV-- 290
              + KA +L L+M+     PNV+T  +L+ G C   + K A  L   M+ +    G+  
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
           +P+ ++++ +I+  CK G+ D+   L + M   GV PD ++Y SL+ GFC  G+   A+ 
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF  MV  G + DV ++++LI+  CK+ KV +A  L   M+     P+ +TY TL+ GL 
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL--- 467
               + +A +L  KMQ    +PD  T+ T + GLC+ G +  A+++ + + +   +    
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815

Query: 468 ---RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + +Y+ +I+GLCK GR   A +LF  ++  G IP+V++ +++IH  C+ G+++ A 
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            L  +M  +    + VT+  ++ GF +  +  K   L  KM A
Sbjct: 876 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDK--ALFQKMEA 916



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 194/365 (53%), Gaps = 21/365 (5%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF---------NAM 300
           M+   + P+  T+N LI   C V    E       +M  G  PD+VT+         + +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  CK+GK+ + N LLE+MIQRG   D VTY++L+ G C+  RIS A  LF+SM   GC
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSE------RIRPSVITYNTLLSGLFQVGN 414
           R D  +Y  L+   C+   +  A+ L++EML++      + +P++I+Y+ ++ GL +   
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
             +A +L  +M+   ++PD  ++ + I G C +G   +A  +F  + +   +  + T   
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI+  CK G++  A +L   + H+G I D+VT ST+I  LC + ++ +A  L + M+   
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE------KLVVSDLSLSSKVVDLLSKD 588
           C P  + + TL++G  Q  K +  + L  +M  +      K +  D++ SS ++D+L K+
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 589 KKYRE 593
            K  E
Sbjct: 361 GKVIE 365


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 175/498 (35%), Positives = 276/498 (55%), Gaps = 3/498 (0%)

Query: 52  NDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG 111
           N + KSG    ++AV  F  +I M P P +  F ++L  + K K Y T +SL K++   G
Sbjct: 49  NAKKKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRG 108

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
           + P +  L++LINC C +G    AF VLG +L+  +  N +T   ++ GLC  G + +A 
Sbjct: 109 ITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKAL 168

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
                +       + VT+ TLINGLC+   T  A +L  +M    G + +P+VV YN I+
Sbjct: 169 EFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKME---GQVVRPNVVIYNMIV 225

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           DGLCKDG V +A++L   +  R I+P+V TY  LI GFC +  W+E   L  +M+D  V 
Sbjct: 226 DGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVN 285

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
            +V T+N +I+  CK G + K + +  LMI+RG  PD VT+N+LM G+CL   +  AR+L
Sbjct: 286 LNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKL 345

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F +    G   DV+SYNILI   CK+ ++++A+ L+ +M  +++ P+++TY++L+ GL +
Sbjct: 346 FDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCK 405

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G +  A +L   +      P+  T+   +D LCK   V +A+++F  +        + +
Sbjct: 406 SGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSS 465

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN LING CK  R+  A  LF  +  +  +PD VT + +I  LCK G++  A +L   M 
Sbjct: 466 YNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMH 525

Query: 532 AKNCVPSEVTFCTLLRGF 549
                   +T+  L   F
Sbjct: 526 DGGPPVDVITYNILFDAF 543



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 221/400 (55%), Gaps = 3/400 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           + T ++  L  N +    +     + + G   D      LIN LCK+G+T  AF +L ++
Sbjct: 150 TLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKM 209

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 PN V +N +++GLC +G + EA  L+  +     DP+V T+  LI+G C     
Sbjct: 210 EGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQW 269

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
               +L  +MV+        +V TYN +ID LCK G + KA ++   M +R   P+++T+
Sbjct: 270 REVTRLLCDMVDRN---VNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTF 326

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N+L+ G+C  +D  EA+ LF    + G+ PDV ++N +I   CK+ ++D+   L   M  
Sbjct: 327 NTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNY 386

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           + + P+ VTY+SL+DG C  GRIS A ELF ++   G   +V +YNI+++A CK Q V+ 
Sbjct: 387 KKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDK 446

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A+ L+  M    + P+V +YN L++G  +   + +A+ L ++M   ++VPDS T+   ID
Sbjct: 447 AIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLID 506

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           GLCK+G +  A ++F  + +    + + TYN L +   K+
Sbjct: 507 GLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKI 546



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 234/464 (50%), Gaps = 4/464 (0%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  +  R++     P+ V FN ++  +        A  L K++ +    P++VT + LIN
Sbjct: 62  AVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILIN 121

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             C   +   A  +   MV + G   + + +T  +I+ GLC +G V KA E    +  + 
Sbjct: 122 CYCHLGHMGFAFSVLG-MVLKRGY--QLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
              + +TY +LI G C +   +EA  L  +M    V+P+VV +N +++  CKDG + +  
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L   ++ RG++PD  TY  L+ GFC +G+      L   MV +    +VY+YNILI+A 
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK   +  A  +   M+    RP ++T+NTL+SG     ++ +A KL D      + PD 
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           +++   I G CKN  + EA+ +F  +   K    I TY+ LI+GLCK GR+  A +LF  
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +   GP P+V+T + M+  LCK   +DKA +L   M  +   P+  ++  L+ G+ ++ +
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             + + L  +M    LV   ++ +  ++D L K  +       F
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNC-LIDGLCKSGRISHAWELF 521



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/325 (35%), Positives = 173/325 (53%), Gaps = 5/325 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +T  EA   +  ++     P + ++T L+       Q+  V  L   +    +  +
Sbjct: 230 KDGLVT--EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLN 287

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N+LI+ LCK G+   A  +   ++     P+ VTFN L++G C    ++EA +LF 
Sbjct: 288 VYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFD 347

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
                   P+V ++N LI G C+      AL LF +M  +  A   P++VTY+S+IDGLC
Sbjct: 348 TFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLA---PNIVTYSSLIDGLC 404

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G +  A EL   + D   +PNVITYN ++   C +    +A  LF  M + G+ P+V 
Sbjct: 405 KSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVS 464

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           ++N +IN  CK  ++D+   L E M +R + PD+VTYN L+DG C  GRIS A ELF  M
Sbjct: 465 SYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVM 524

Query: 356 VSKGCRHDVYSYNILINANCKDQKV 380
              G   DV +YNIL +A  K Q V
Sbjct: 525 HDGGPPVDVITYNILFDAFSKIQHV 549



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 177/357 (49%), Gaps = 3/357 (0%)

Query: 236 KDGF--VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           K GF  +D A  L  ++   +  P+V+ +N ++     +  +  A  L  +M   G+ P 
Sbjct: 53  KSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPS 112

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           +VT + +IN  C  G M     +L ++++RG   + +T  ++M G C+ G + +A E   
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
           S+V++G   D  +Y  LIN  CK     +A  L  +M  + +RP+V+ YN ++ GL + G
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            + +A  L   +    + PD FT+   I G C  G   E  ++   + +    L + TYN
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI+ LCK G L  A  + + +  +G  PD+VT +T++   C    + +A  L       
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAEC 352

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
              P   ++  L+ G+ +NN+  + + L +KM  +KL  + ++ SS ++D L K  +
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSS-LIDGLCKSGR 408



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 2/148 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG I+   A   F  +    PSP + ++ I+L  L K +  D  + LF  +   GL P+
Sbjct: 405 KSGRISY--AWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPN 462

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N+LIN  CK      A  +   + R    P++VT+N LI+GLC  GRI  A  LF 
Sbjct: 463 VSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFN 522

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTL 203
            ++      +V+T+N L +   + ++ +
Sbjct: 523 VMHDGGPPVDVITYNILFDAFSKIQHVI 550


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 189/548 (34%), Positives = 303/548 (55%), Gaps = 6/548 (1%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           TS A+FL+    + ++  + A+ F+  M+ MKP P +  F +L +++AK K Y T +SL 
Sbjct: 49  TSRAQFLDSMRNAKSV--DVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLI 106

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
           K ++  G+ P +  LN++INCLC++      F VLG + +    P+ VTFN ++NGLC E
Sbjct: 107 KHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVE 166

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           G + +A R    L     + +  T   + NGLC+  ++  AL   ++M  +    C  DV
Sbjct: 167 GNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEK---NCNLDV 223

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
             Y+ ++DGLCKDG V +A  L  QM  + I P++ TYN LI G C  D WKEA  L   
Sbjct: 224 TAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLAN 283

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           MM  G+ PDV TFN +     K G + +   +   M+  G+  D VTY S++   C++ +
Sbjct: 284 MMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQ 343

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A E+F  M+SKGC  ++ +Y  LI+  C+ + +  A+    EM++  + P+V+T++T
Sbjct: 344 MKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWST 403

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ G+ + G    A +L   M  +  +P+  T A  +DGL K  F  EA+ +F+ +    
Sbjct: 404 LIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMN 463

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +L I  YN +++G+C  G+L  A +LF  L  KG   DVVT + MI  LCKEG +D A 
Sbjct: 464 WDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAE 523

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           DLL+ ME   C P+E T+   ++G ++  + SK    L  M  +K   +D + +  +++ 
Sbjct: 524 DLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFM-KDKGFQADATTTKFLINY 582

Query: 585 LSKDKKYR 592
            S +K+ R
Sbjct: 583 FSANKENR 590


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  326 bits (835), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 185/516 (35%), Positives = 281/516 (54%), Gaps = 3/516 (0%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           M P P    F  L  ++ K K Y T +SL K   S G+ PD+  L ++INCLC +  T  
Sbjct: 1   MNPLPPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVF 60

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
            F VLG + +    P  VTF  LINGLCAEG +  AAR    L     + N  T  T+IN
Sbjct: 61  GFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIIN 120

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           GLC+  +T  A+   E++           ++ Y++I+D LCKDG +  A      M  + 
Sbjct: 121 GLCKVGDTAGAISYLEKIEGRNRGF--DLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKG 178

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           I P+++ YNSLI G C    W EA  L   MM  G+ P+V TFN +++  CK+GK+ +  
Sbjct: 179 IQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAK 238

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            ++  M+  GV PD VTYNS++ G CL+ +++ A ++F  M+ KG   +V +Y+ LI+  
Sbjct: 239 TIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGW 298

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK + +  A+ +  EM++  +   V+T++TL+ G  + G    A++L   M  +  +P+ 
Sbjct: 299 CKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNL 358

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T A  +DGL K  F  EA+ +F+ +     EL I TYN +++G+C  G+   A +LF  
Sbjct: 359 QTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSC 418

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           L  KG   DVV  +TMI  LCKEG +D A DLL+ ME   C P+E T+  L+RG +Q   
Sbjct: 419 LPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYD 478

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            S+    L  M  + L  +D + +  ++   S +K+
Sbjct: 479 ISRSTKYLMLMKGKGL-SADATTTELLISYFSANKE 513



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 220/444 (49%), Gaps = 4/444 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K+   P + +F  L+  L               L   G   + +    +IN LCK+G 
Sbjct: 68  MFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGD 127

Query: 132 TSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
           T+GA   L +I  R+      + ++ +++ LC +G +  A   F  +      P++V +N
Sbjct: 128 TAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYN 187

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           +LI+GLC       A  L   M+ + G +  P+V T+N ++D  CK+G + +AK ++  M
Sbjct: 188 SLIHGLCSFGRWNEATTLLGNMMRK-GIM--PNVQTFNVLVDNFCKEGKISRAKTIMCFM 244

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
               + P+V+TYNS+I G C +    +A  +F  M+  G+ P+VVT++++I+  CK   +
Sbjct: 245 VHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNI 304

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           +K   +L+ M+  G+N D VT+++L+ GFC  GR   A ELF +M       ++ +  I+
Sbjct: 305 NKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAII 364

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           ++   K Q   +A+ L+R+M    +  +++TYN +L G+   G   DA +L   +    +
Sbjct: 365 LDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGI 424

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
             D   + T I GLCK G + +A  +   +    C     TYN L+ GL +   +  + K
Sbjct: 425 QIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTK 484

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWL 514
               ++ KG   D  T   +I + 
Sbjct: 485 YLMLMKGKGLSADATTTELLISYF 508



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 160/309 (51%), Gaps = 3/309 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+ FF  M      P + ++  L+  L    +++   +L   +   G+ P++   N+L++
Sbjct: 167 ALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVD 226

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G  S A  ++  ++     P+ VT+N +I+G C   ++ +A ++F+ +      P
Sbjct: 227 NFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLP 286

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           NVVT+++LI+G C+TRN   A+ + +EMVN        DVVT++++I G CK G  + A 
Sbjct: 287 NVVTYSSLIHGWCKTRNINKAIFVLDEMVNNG---LNLDVVTWSTLIGGFCKAGRPEAAI 343

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           EL   M + +  PN+ T   ++ G        EA  LF +M    ++ ++VT+N +++  
Sbjct: 344 ELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGM 403

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  GK +    L   +  +G+  D V Y +++ G C  G +  A +L + M   GC  + 
Sbjct: 404 CSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNE 463

Query: 365 YSYNILINA 373
           ++YN+L+  
Sbjct: 464 FTYNVLVRG 472



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 152/310 (49%), Gaps = 3/310 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA      M++    P + +F +L+    K  +     ++   +   G+ PD+   N +
Sbjct: 200 NEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSV 259

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C +   + A  V   ++     PN VT++ LI+G C    I +A  +  ++     
Sbjct: 260 ISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGL 319

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + +VVT++TLI G C+      A++LF  M +E   +  P++ T   I+DGL K  F  +
Sbjct: 320 NLDVVTWSTLIGGFCKAGRPEAAIELFCTM-HEHHQL--PNLQTCAIILDGLFKCQFHSE 376

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +M+  N+  N++TYN ++ G C    + +A+ LF  +   G+Q DVV +  MI 
Sbjct: 377 AISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIK 436

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+G +D    LL  M + G  P+  TYN L+ G      ISR+ +  + M  KG   
Sbjct: 437 GLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSA 496

Query: 363 DVYSYNILIN 372
           D  +  +LI+
Sbjct: 497 DATTTELLIS 506



 Score = 43.5 bits (101), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 1/172 (0%)

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
           +N + PD   FAT    + K      A+ + +   +   +  + T   +IN LC +    
Sbjct: 1   MNPLPPDK-DFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTV 59

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
               +   +   G  P VVT +T+I+ LC EG +  A      +E      +  T  T++
Sbjct: 60  FGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTII 119

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            G  +    +  +  L K+         L   S ++D L KD      LN F
Sbjct: 120 NGLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFF 171


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 176/514 (34%), Positives = 289/514 (56%), Gaps = 38/514 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M+K +P P +  F  LL+ +AK K++D V+SL +++   G+  +L+  N+L
Sbjct: 67  DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C+    S A  +LG++++  + P+ VT + L+NG C   RI +A  L  ++     
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ +TF TLI+GL        A+ L + MV      C+P++VTY  +++GLCK G +D 
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG---CQPNLVTYGVVVNGLCKRGDIDL 243

Query: 243 AKELL-----------------------------------LQMKDRNINPNVITYNSLIC 267
           A  LL                                    +M+++ + PNVITY+SLI 
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
             C  + W +A  L  +M++  + P+VVTFNA+I+   K+GK+ +  +L + MI+R ++P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  TY+SL++GFC+  R+  A+ +F  M+SK C  +V +YN LIN  CK +++++ V L+
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           REM    +  + +TY TL+ G FQ  +  +A  +  +M  + V P+  T+ T +DGLCKN
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + +A+ VF+ ++  K E  I TYN +I G+CK G+++    LF  L  KG  PDV+  
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
           +TMI   C++G  ++A+ L   M     +P   T
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 222/436 (50%), Gaps = 3/436 (0%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  + G +++S   P+   FN L++ +    +      L +K+       N+ T+N LIN
Sbjct: 69  AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             CR     +AL L  +M+ + G   +P +VT +S+++G C    +  A  L+ QM +  
Sbjct: 129 CFCRRSQISLALALLGKMM-KLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             P+ IT+ +LI G    +   EA  L   M+  G QP++VT+  ++N  CK G +D   
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            LL  M    +  + V Y++++D  C       A  LF  M +KG R +V +Y+ LI+  
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C  ++  DA  L  +M+  +I P+V+T+N L+    + G L +A KL D+M    + PD 
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           FT+++ I+G C +  + EA  +F+ + +  C   + TYN LING CK  R+    +LF  
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  +G + + VT +T+IH   +    D A  +   M +    P+ +T+ TLL G  +N K
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485

Query: 555 KSKVVVLLHKMAAEKL 570
             K +V+   +   K+
Sbjct: 486 LEKAMVVFEYLQRSKM 501



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 215/441 (48%), Gaps = 41/441 (9%)

Query: 200 RNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           RN L ++KL ++ +  FG + K    P +  +N ++  + K    D    L  +M+   I
Sbjct: 58  RNGLHSMKL-DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           + N+ TYN LI  FC       A  L  +MM  G +P +VT ++++N  C   ++     
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L++ M++ G  PDT+T+ +L+ G  L  + S A  L   MV +GC+ ++ +Y +++N  C
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236

Query: 376 KDQKVE-------------------------DAVCLYR----------EMLSERIRPSVI 400
           K   ++                         D++C YR          EM ++ +RP+VI
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TY++L+S L       DA +L+  M    + P+  TF   ID   K G ++EA +++  +
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                +  I TY+ LING C   RL  A  +F  +  K   P+VVT +T+I+  CK  ++
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           D+  +L  +M  +  V + VT+ TL+ GF Q        ++  +M ++  V  ++   + 
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPNIMTYNT 475

Query: 581 VVDLLSKDKKYRECLNQFRHL 601
           ++D L K+ K  + +  F +L
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYL 496



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 1/235 (0%)

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y  ++       K++DA+ L+  M+  R  PS+  +N LLS + ++      + L +KMQ
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              +  + +T+   I+  C+   +  A+ +   +     E  I T + L+NG C   R+ 
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A  L  ++   G  PD +T +T+IH L    +  +A  L+  M  + C P+ VT+  ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            G  +         LL+KM A K + +++ + S V+D L K +   + LN F  +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 184/510 (36%), Positives = 296/510 (58%), Gaps = 12/510 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A++ F  M+ M+ +P +  F  +L   AK K Y TVVSL +RL    + PD F LN+L
Sbjct: 45  DDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNIL 104

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C +G  + AF VL +IL+  + P+TVT   LI GLC +G++ +A     KL     
Sbjct: 105 INCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGF 164

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + V++ TLING+C+   T  A++L   +    G + +P+VV YN+IID LCK   V +
Sbjct: 165 RLDQVSYGTLINGVCKIGETRAAIQLLRRID---GRLTEPNVVMYNTIIDCLCKRKLVSE 221

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +M  + I+ NV+TY+++I GFC V    EA     EM+   + PDV  +N +++
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVD 281

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+GK+ +   +L ++++  + P+ +TYN+L+DG+        A+ +F ++   G   
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTP 333

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV+SYNI+IN  CK ++VE+A+ LY+EM  + + P+ +TYN+L+ GL + G +  A  LI
Sbjct: 334 DVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLI 393

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING-LCK 481
           D+M       +  T+ + I+GLCKNG + +A+ +   +++   +  + T N L++G LCK
Sbjct: 394 DEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCK 453

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             RLK A  LF  L  KG  P+V T + +I+  CKEG +D+A  L   ME   C P+ +T
Sbjct: 454 GKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAIT 513

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           F  ++   ++  +  K   LL +M A  L+
Sbjct: 514 FKIIICALLEKGETDKAEKLLCEMIARGLL 543



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 27/408 (6%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P ++ +N I+D   K         L  +++ + I P+  T N LI  FC +     A  +
Sbjct: 61  PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             +++  G QPD VT   +I   C  G++ K     + ++ +G   D V+Y +L++G C 
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           +G    A +L   +  +    +V  YN +I+  CK + V +A  L+ EM  + I  +V+T
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+ ++ G   VG L +AL  +++M L  + PD + + T +D L K G V EA  V   I 
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIV 300

Query: 462 NCKCELRIETYNCLING---------------------------LCKMGRLKTACKLFHR 494
               +  + TYN LI+G                           LCK+ R++ A  L+  
Sbjct: 301 KTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKE 360

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  K  +P+ VT +++I  LCK G++  A DL+ +M  +    + +T+ +L+ G  +N +
Sbjct: 361 MHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQ 420

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             K + L++KM  + +     +L+  +  LL K K+ +     F+ LL
Sbjct: 421 LDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLL 468



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 36/254 (14%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + V+DA+  +  ML  R  P +I +N +L    ++ +    + L  +++L  + PD FT 
Sbjct: 42  ENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTL 101

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA--------- 488
              I+  C  G +  A  V   I     +    T   LI GLC  G++K A         
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161

Query: 489 -----------------CK---------LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                            CK         L  R+  +   P+VV  +T+I  LCK   + +
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE 221

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A +L  +M  K    + VT+  ++ GF    K ++ +  L++M   K +  D+ + + +V
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVL-KAINPDVYIYNTLV 280

Query: 583 DLLSKDKKYRECLN 596
           D L K+ K +E  N
Sbjct: 281 DALHKEGKVKEAKN 294


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  321 bits (823), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 170/442 (38%), Positives = 265/442 (59%), Gaps = 3/442 (0%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P+P +  F  +L  L K   Y  VVSL +++  NG+  +L  L++LINC  ++G  S +F
Sbjct: 65  PTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSF 124

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            V   IL+  + P+ +T   LI GLC +G I +A     K+       N V++ TLINGL
Sbjct: 125 SVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGL 184

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+   T  AL++   +    G + + DVV YN+IIDG+CKD  V+ A +   +M  + I 
Sbjct: 185 CKVGQTKAALEMLRRID---GKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRIC 241

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P V+TYN+LICG C +   K+A  L  +M+   + P V TF+ +++  CK+GK+ +   +
Sbjct: 242 PTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNV 301

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
             +M+++ V P+ VTYNSLM+G+CLV  +++A  +F +M   G   DV+SY+I+I+  CK
Sbjct: 302 FVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCK 361

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
            + V++A+ L+ EM  ++I P V+TYN+L+ GL + G +  ALKLI +M      P+  T
Sbjct: 362 IKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIIT 421

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + + +D LCKN  V +A+++   +++   +  + TYN LINGLCK GRLK A K+F  + 
Sbjct: 422 YNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVL 481

Query: 497 HKGPIPDVVTCSTMIHWLCKEG 518
             G   DV T +TMI   CK+G
Sbjct: 482 VNGYNIDVYTYNTMIKGFCKKG 503



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 231/455 (50%), Gaps = 16/455 (3%)

Query: 113 FPDLFVLN--LLINCLCKMGITSGAFVVLGRI--LRSCF---------TPNTVTFNFLIN 159
           FP+   LN   LI+C       S +  +  ++  L S F         TP+ + F  ++ 
Sbjct: 18  FPNFQFLNPIFLIHCFTSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILG 77

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
            L           L +++       N+VT + LIN   +  +  ++  +F  ++ +    
Sbjct: 78  SLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKG--- 134

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
            +PD +T  ++I GLC  G + KA     ++       N ++Y +LI G C V   K A 
Sbjct: 135 YEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAAL 194

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            +   +    V+ DVV +N +I+  CKD  ++        M+ + + P  VTYN+L+ G 
Sbjct: 195 EMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGL 254

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C++G++  A  L   M+ +     VY+++IL++A CK+ KV++A  ++  M+ + ++P++
Sbjct: 255 CIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNI 314

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TYN+L++G   V  +  A  + + M    V PD  +++  I G CK   V EA+++F+ 
Sbjct: 315 VTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEE 374

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +   +    + TYN LI+GLCK GR+  A KL   +  +G  P+++T ++++  LCK   
Sbjct: 375 MHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHH 434

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +DKA +LL  ++  N  PS  T+  L+ G  ++ +
Sbjct: 435 VDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGR 469



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 177/344 (51%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P ++ +  I+  L K         L  QM+   I  N++T + LI  F  +     +  +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           F  ++  G +PD +T   +I   C  G + K     + ++  G   + V+Y +L++G C 
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           VG+   A E+   +  K  R DV  YN +I+  CKD+ V DA   Y EM+++RI P+V+T
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YNTL+ GL  +G L DA+ L+ KM L ++ P  +TF+  +D  CK G V EA  VF  + 
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +  I TYN L+NG C +  +  A  +F+ +   G  PDV + S MI   CK   +D
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVD 366

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +A  L  +M  K   P  VT+ +L+ G  ++ + S  + L+ +M
Sbjct: 367 EAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEM 410



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 153/310 (49%), Gaps = 1/310 (0%)

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           P ++ F  ++    K      V  L   M   G+  + VT + L++ F  +G  S +  +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F +++ KG   D  +   LI   C    +  A+  + ++L+   + + ++Y TL++GL +
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
           VG    AL+++ ++    V  D   + T IDG+CK+  V +A   +  +   +    + T
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN LI GLC MG+LK A  L H++  +   P V T S ++   CKEG++ +A ++ + M 
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
            K+  P+ VT+ +L+ G+   N+ +K   + + M A+  V  D+   S ++    K K  
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTM-AQIGVAPDVHSYSIMISGFCKIKMV 365

Query: 592 RECLNQFRHL 601
            E +  F  +
Sbjct: 366 DEAMKLFEEM 375


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  321 bits (823), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 259/423 (61%), Gaps = 3/423 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A++ F+ MI   P P +  F  LL+ L + K Y TV+SL KR+    +  D+F  N+L
Sbjct: 66  EDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNIL 125

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC  ++     AF VLG+I++  F P+ VTF+ LINGLC E +   A   F ++     
Sbjct: 126 INCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGY 185

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+NT+I G C+   T VA+ L ++M    G   +PD+V YN+IIDGLCKD  V +
Sbjct: 186 QPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGG---RPDIVIYNTIIDGLCKDRLVSE 242

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++  ++K + + P+V TY+ L+ G C  D  +EA  LF EMM   + PDVVTFN +++
Sbjct: 243 ALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVD 302

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+G + +   ++++MI++GV P+  TYNSLM+G+CL  ++  AR +F +M++KGC  
Sbjct: 303 KLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMP 362

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V SYNILIN  CK Q++++A  L+ EM    + P+   YNTL+SGL Q G   +A +L 
Sbjct: 363 NVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELF 422

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             MQ     PD  T    +D LCK G++  A+++F+A+++   +  + TY+ LI  + K 
Sbjct: 423 KDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKS 482

Query: 483 GRL 485
           G++
Sbjct: 483 GKI 485



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/363 (34%), Positives = 199/363 (54%), Gaps = 4/363 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P +V F+ L++ L R ++    L L + +  E   I + DV  +N +I+   +   VD A
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRI--ELLRI-ERDVFHFNILINCFSRLQRVDFA 138

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +L ++      P+ +T++SLI G C  D +  A   F EM+ +G QP++ T+N +I  
Sbjct: 139 FSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKG 198

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK GK      LL+ M + G  PD V YN+++DG C    +S A ++F  +  KG R D
Sbjct: 199 FCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPD 258

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V++Y+IL++  C   + E+A  L+ EM+S  I P V+T+N L+  L + G L +A  +I 
Sbjct: 259 VFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIK 318

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M    V P+  T+ + ++G C    V EA  VF A+    C   + +YN LING CK  
Sbjct: 319 IMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQ 378

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+  A +LF  +  +G IP+    +T+I  LC+ G+  +A +L  DM+A+ C P  VT C
Sbjct: 379 RIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVT-C 437

Query: 544 TLL 546
           T+L
Sbjct: 438 TIL 440



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 207/406 (50%), Gaps = 3/406 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P  V F+ L++ L           L K++ +   + +V  FN LIN   R +    A  +
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +++ + G   +PD VT++S+I+GLC +    +A E   +M      PN+ TYN++I G
Sbjct: 142 LGKII-KLGF--EPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKG 198

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           FC +     A  L  +M   G +PD+V +N +I+  CKD  + +   +   +  +GV PD
Sbjct: 199 FCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPD 258

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
             TY+ LM G C   +   A  LF  M+S     DV ++NIL++  CK+  + +A  + +
Sbjct: 259 VFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIK 318

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+ + + P+  TYN+L++G      + +A  + D M     +P+  ++   I+G CK  
Sbjct: 319 IMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQ 378

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EA ++F  +           YN LI+GLC+ GR   A +LF  +Q +G  PD+VTC+
Sbjct: 379 RIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCT 438

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            ++  LCK G +D A  L   M+     P+ VT+  L+R   ++ K
Sbjct: 439 ILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGK 484



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 198/405 (48%), Gaps = 4/405 (0%)

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C   N   AL  F  M+++    C   +V ++ ++  L +         L  +++   I 
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPC---IVEFDKLLSALVRIKHYGTVLSLSKRIELLRIE 116

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
            +V  +N LI  F  +     A  +  +++  G +PD VTF+++IN  C + K  +    
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
            + M+  G  P+  TYN+++ GFC +G+ + A  L   M   G R D+  YN +I+  CK
Sbjct: 177 FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           D+ V +A+ ++ E+  + +RP V TY+ L+ GL       +A  L ++M   +++PD  T
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           F   +D LCK G + EA  + + +     E    TYN L+NG C   ++  A  +F  + 
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG +P+VV+ + +I+  CK  ++D+A +L  +M  +  +P+   + TL+ G  Q  +  
Sbjct: 357 TKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHC 416

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +   L   M A+     DL   + ++D L K       L  FR +
Sbjct: 417 EARELFKDMQAQG-CSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 143/283 (50%), Gaps = 3/283 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV     M K    P +  +  ++  L K++     + +F  +   G+ PD+F  ++L++
Sbjct: 208 AVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMH 267

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LC       A  +   ++     P+ VTFN L++ LC EG + EA  + K +     +P
Sbjct: 268 GLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEP 327

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N  T+N+L+NG C       A  +F+ M+ +    C P+VV+YN +I+G CK   +D+A+
Sbjct: 328 NYATYNSLMNGYCLQNKVFEARMVFDAMITKG---CMPNVVSYNILINGYCKAQRIDEAR 384

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           EL  +M  R + PN   YN+LI G C      EA+ LF +M   G  PD+VT   +++  
Sbjct: 385 ELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSL 444

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           CK G +D   RL   M    + P+ VTY+ L+      G+I R
Sbjct: 445 CKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 175/504 (34%), Positives = 293/504 (58%), Gaps = 4/504 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M+K +P P +  F+ LL+ +AK  ++D V+SL +++ + G+  +L+  ++ 
Sbjct: 57  DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  C+    S A  +LG++++  + P+ VT N L+NG C   RI EA  L  ++     
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ VTF TL++GL +      A+ L E MV +    C+PD+VTY ++I+GLCK G  D 
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG---CQPDLVTYGAVINGLCKRGEPDL 233

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL +M+   I  +V+ YN++I G C      +A  LF +M   G++PDV T+N +I+
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGCR 361
             C  G+    +RLL  M+++ +NPD V +N+L+D F   G++  A +L+  MV SK C 
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            DV +YN LI   CK ++VE+ + ++REM    +  + +TY TL+ G FQ  +  +A  +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
             +M  + V PD  T+   +DGLC NG V  A+ VF+ ++    +L I TY  +I  LCK
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G+++    LF  L  KG  P+VVT +TM+   C++G  ++A+ L ++M+    +P+  T
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
           + TL+R  +++  ++    L+ +M
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEM 557



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 199/377 (52%), Gaps = 2/377 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EAV   + M+     P + ++  ++  L K  + D  ++L  ++    +  D+ + N 
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+ LCK      AF +  ++      P+  T+N LI+ LC  GR  +A+RL   +    
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +P++V FN LI+   +    + A KL++EMV      C PDVV YN++I G CK   V+
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS--KHCFPDVVAYNTLIKGFCKYKRVE 373

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +  E+  +M  R +  N +TY +LI GF    D   A+ +F +M+ +GV PD++T+N ++
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C +G ++    + E M +R +  D VTY ++++  C  G++    +LF S+  KG +
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +V +Y  +++  C+    E+A  L+ EM  +   P+  TYNTL+    + G+   + +L
Sbjct: 494 PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAEL 553

Query: 422 IDKMQLNDVVPDSFTFA 438
           I +M+      D+ TF 
Sbjct: 554 IKEMRSCGFAGDASTFG 570



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 206/416 (49%), Gaps = 5/416 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++V F+ L++ + +     + + L E+M N  G     ++ TY+  I+  C+   +  A
Sbjct: 73  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQN-LG--ISHNLYTYSIFINYFCRRSQLSLA 129

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +L +M      P+++T NSL+ GFC  +   EA  L  +M++ G QPD VTF  +++ 
Sbjct: 130 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 189

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             +  K  +   L+E M+ +G  PD VTY ++++G C  G    A  L   M       D
Sbjct: 190 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 249

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V  YN +I+  CK + ++DA  L+ +M ++ I+P V TYN L+S L   G   DA +L+ 
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKM 482
            M   ++ PD   F   ID   K G ++EA +++ + +++  C   +  YN LI G CK 
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            R++   ++F  +  +G + + VT +T+IH   +    D A  +   M +    P  +T+
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             LL G   N      +V+   M    + + D+   + +++ L K  K  +  + F
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKL-DIVTYTTMIEALCKAGKVEDGWDLF 484



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 162/325 (49%)

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  LF +M+ +   P +V F+ +++   K  K D V  L E M   G++ +  TY+  +
Sbjct: 58  DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           + FC   ++S A  +   M+  G    + + N L+N  C   ++ +AV L  +M+    +
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P  +T+ TL+ GLFQ     +A+ L+++M +    PD  T+   I+GLCK G    A+ +
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              +   K E  +  YN +I+GLCK   +  A  LF++++ KG  PDV T + +I  LC 
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            G+   A+ LL DM  KN  P  V F  L+  FV+  K  +   L  +M   K    D+ 
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357

Query: 577 LSSKVVDLLSKDKKYRECLNQFRHL 601
             + ++    K K+  E +  FR +
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREM 382



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 1/289 (0%)

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           +D K+D    L   M++    P  V ++ L+     + +      L   M + G  H++Y
Sbjct: 52  QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y+I IN  C+  ++  A+ +  +M+     PS++T N+LL+G      + +A+ L+D+M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
                 PD+ TF T + GL ++    EAV + + +    C+  + TY  +INGLCK G  
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A  L ++++      DVV  +T+I  LCK   MD A DL   ME K   P   T+  L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           +       + S    LL  M  EK +  DL   + ++D   K+ K  E 
Sbjct: 292 ISCLCNYGRWSDASRLLSDM-LEKNINPDLVFFNALIDAFVKEGKLVEA 339


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  317 bits (813), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 171/450 (38%), Positives = 272/450 (60%), Gaps = 8/450 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P  VTFN L++GLC++ +IM+A +LF ++     +P+V+T++T+INGLC+  NT +AL+L
Sbjct: 8   PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQL 67

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            ++M  E G  CKP+VV YN+IID LCKD  V +A +   +M    I P+V TY+S++ G
Sbjct: 68  LKKM-EEKG--CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           FC +    EA  LF +M++  V P+ VTF  +I+  CK   + +   + E M ++G+ PD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
             TYN+L+DG+C   ++  A++LF  M  KGC  +V SYNILIN +CK  ++++A  L  
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM  + + P + TY+TL+ G  QVG   +A +L+ +M    ++P+  T++  +DGLCK+G
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EA ++ +A++  K E  I  Y  LI G+C  G+L+ A +LF  L  KG  P VVT +
Sbjct: 305 HLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYT 364

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            MI  L K G  ++A +L  +M    C+P+  T+  +++GF++N      V L+     E
Sbjct: 365 VMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLI-----E 419

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           ++V    S  S    +LS  +   E ++QF
Sbjct: 420 EMVGKGFSADSSTFRMLSDLESSDEIISQF 449



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/435 (31%), Positives = 224/435 (51%), Gaps = 3/435 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K+   P + +F  LL+ L    +    V LF  +   G  PD+   + +IN LCKMG 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T+ A  +L ++      PN V +N +I+ LC +  + EA   F ++      P+V T+++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +++G C       A  LF++MV E   I  P+ VT+  +IDGLCK   + +A  +   M 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMV-ERNVI--PNKVTFTILIDGLCKKRMISEAWLVFETMT 177

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           ++ + P+V TYN+L+ G+C      EA+ LF  M   G  P+V ++N +IN +CK G++D
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL  M  + + PD  TY++LM GFC VGR   A+EL   M S G   ++ +Y+I++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CK   +++A  L + M   +I P++  Y  L+ G+   G L  A +L   + +  + 
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P   T+   I GL K G   EA ++F+ +    C     TYN +I G  + G    A +L
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRL 417

Query: 492 FHRLQHKGPIPDVVT 506
              +  KG   D  T
Sbjct: 418 IEEMVGKGFSADSST 432



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 211/397 (53%), Gaps = 3/397 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  FD M+KM   P + +++ ++  L K       + L K++   G  P++   N +I
Sbjct: 28  DAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTII 87

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK  + + A      +++    P+  T++ +++G C  GR+ EA  LFK++      
Sbjct: 88  DSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVI 147

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VTF  LI+GLC+ R    A  +FE M  +     +PDV TYN+++DG C    +D+A
Sbjct: 148 PNKVTFTILIDGLCKKRMISEAWLVFETMTEKG---LEPDVYTYNALVDGYCSRSQMDEA 204

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           ++L   M  +   PNV +YN LI G C      EAK L  EM    + PD+ T++ ++  
Sbjct: 205 QKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRG 264

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G+  +   LL+ M   G+ P+ +TY+ ++DG C  G +  A EL  +M       +
Sbjct: 265 FCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPN 324

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           ++ Y ILI   C   K+E A  L+  +  + I+P+V+TY  ++SGL + G   +A +L  
Sbjct: 325 IFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFR 384

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +M +N  +P+S T+   I G  +NG    AV++ + +
Sbjct: 385 EMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 178/317 (56%), Gaps = 1/317 (0%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M   G+QP +VTFN +++  C   K+    +L + M++ G  PD +TY+++++G C +G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
            + A +L   M  KGC+ +V +YN +I++ CKD+ V +A+  + EM+ E I P V TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           +L G   +G + +A  L  +M   +V+P+  TF   IDGLCK   + EA  VF+ +    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            E  + TYN L++G C   ++  A KLF+ +  KG  P+V + + +I+  CK G++D+A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            LL +M  K+  P   T+ TL+RGF Q  +  +   LL +M +  L + +L   S V+D 
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGL-LPNLITYSIVLDG 299

Query: 585 LSKDKKYRECLNQFRHL 601
           L K     E     + +
Sbjct: 300 LCKHGHLDEAFELLKAM 316



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 171/317 (53%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            + P ++T+N+L+ G C      +A  LF EM+  G +PDV+T++ +IN  CK G     
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
            +LL+ M ++G  P+ V YN+++D  C    ++ A + F  MV +G   DV++Y+ +++ 
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C   +V +A  L+++M+   + P+ +T+  L+ GL +   + +A  + + M    + PD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            +T+   +DG C    + EA ++F  +    C   + +YN LING CK GR+  A  L  
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            + HK   PD+ T ST++   C+ G+  +A +LL +M +   +P+ +T+  +L G  ++ 
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304

Query: 554 KKSKVVVLLHKMAAEKL 570
              +   LL  M   K+
Sbjct: 305 HLDEAFELLKAMQESKI 321



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 161/316 (50%), Gaps = 3/316 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   F  M++    P   +FTIL+  L K +       +F+ +   GL PD++  N L
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C       A  +   + R    PN  ++N LING C  GRI EA  L  +++  + 
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++ T++TL+ G C+      A +L +EM + +G +  P+++TY+ ++DGLCK G +D+
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCS-YGLL--PNLITYSIVLDGLCKHGHLDE 308

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ELL  M++  I PN+  Y  LI G C     + A+ LF  +   G+QP VVT+  MI+
Sbjct: 309 AFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMIS 368

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G  ++   L   M   G  P++ TYN ++ GF   G    A  L   MV KG   
Sbjct: 369 GLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSA 428

Query: 363 DVYSYNILINANCKDQ 378
           D  ++ +L +    D+
Sbjct: 429 DSSTFRMLSDLESSDE 444


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 172/485 (35%), Positives = 274/485 (56%), Gaps = 5/485 (1%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G  PD   +  L+  +        A  +   +       +  T+  LINGLC   +   A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
            +L +K+    C  +V T+  +I+ LC+   T  AL +F EM+   GA   PDVV Y+S+
Sbjct: 132 IKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMI---GAGILPDVVVYSSL 187

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           +DGLC+ G + +A E   +M+ R I+ +V TYNSLI G      WKE       M+D G 
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PD  TF  +I+  CK+GK+ +  ++LELM  +G  PD +TYN+LM+G CLVG++  A +
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF S+  +G + +V+SYNILIN  CKDQK+++A  L+ EM  + ++PS +TYNTL+  L 
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           Q G +  A KL  +MQ         T+   +DGLCKNG + EA+ +FQ+I+  + +  IE
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            ++ L++G+C+ G+L+ A K F  +   G  PD +  + +I+ LC +G + +A  LL  M
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQM 487

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           E K C+P  +TF  +++  ++ N+  + + LL +M        D +++S ++ L S D +
Sbjct: 488 EEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNF-SPDEAVTSMLLCLASFDPQ 546

Query: 591 YRECL 595
           +   L
Sbjct: 547 WHAAL 551



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 246/448 (54%), Gaps = 4/448 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  FD M +        ++ IL+  L K ++    + L +++  N    D+F   ++I
Sbjct: 95  DAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMII 153

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G+T+ A  +   ++ +   P+ V ++ L++GLC  GR+ EA   FK++      
Sbjct: 154 DSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 213

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            +V T+N+LI+GL R       +  F  ++ + G    PD  T+  +IDGLCK+G V +A
Sbjct: 214 ADVYTYNSLIHGLSRA-GLWKEVTWFLNLMVDRG--FSPDAFTFTILIDGLCKEGKVGEA 270

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +++L  M  +   P+++TYN+L+ G C V   ++A  LF  + D G++ +V ++N +IN 
Sbjct: 271 QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 330

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CKD K+D+  RL E M  +G+ P TVTYN+L+   C  GR+  A++LFV M + G    
Sbjct: 331 YCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 390

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +Y +L++  CK+  +E+A+ L++ +     +P++  ++ LL G+ + G L +A K  D
Sbjct: 391 LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 450

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           ++  N + PD+  +   I+GLC  G + EAV++   +    C     T+N +I  L K  
Sbjct: 451 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 510

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMI 511
            +  A +L   ++++   PD    S ++
Sbjct: 511 EIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 197/373 (52%), Gaps = 3/373 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + EA+  F  MI     P +  ++ L+  L +  +    +  FK +   G+  D++  N 
Sbjct: 162 TTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNS 221

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+ L + G+       L  ++   F+P+  TF  LI+GLC EG++ EA ++ + ++   
Sbjct: 222 LIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKG 281

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +P+++T+NTL+NGLC       A KLFE + +      K +V +YN +I+G CKD  +D
Sbjct: 282 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG---IKLNVFSYNILINGYCKDQKID 338

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  L  +M+ + + P+ +TYN+LI   C     + A+ LF+EM   G    + T+  ++
Sbjct: 339 EAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 398

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK+G +++   L + + +    P+   ++ L+DG C  G++  A + F  +   G  
Sbjct: 399 DGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YNILIN  C    + +AV L  +M  +   P  IT+N ++  L +   + +A++L
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 518

Query: 422 IDKMQLNDVVPDS 434
           +++M+  +  PD 
Sbjct: 519 LEEMRNRNFSPDE 531



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 17/265 (6%)

Query: 40  HFKDGTSIAKFLNDRHKSGNITS--------------NEAVYFFDCMIKMKPSPGMTSFT 85
             +D T + + L DR    N+ S              +EA   F+ M      P   ++ 
Sbjct: 301 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYN 360

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
            L+  L ++ +  T   LF  + + G F  L    +L++ LCK G    A  +   I ++
Sbjct: 361 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKT 420

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
              PN   F+ L++G+C  G++ EA + F +++    +P+ + +N LINGLC       A
Sbjct: 421 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 480

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
           +KL  +M  E G  C PD +T+N II  L K+  + +A +LL +M++RN +P+    + L
Sbjct: 481 VKLLWQM-EEKG--CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 537

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGV 290
           +C       W  A       +  GV
Sbjct: 538 LCLASFDPQWHAALVSLPNALQKGV 562


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 189/568 (33%), Positives = 303/568 (53%), Gaps = 10/568 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + A  L    + G I  ++A   FD M      P +   +IL+  L K K+    + 
Sbjct: 8   DVYTYAALLRGFCRGGEI--DQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            F+ +  +G+  D  +   L++ L K      A  +L  +      PN VT+N LI+GLC
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN----EFGA 218
                  A  LF+ +    C P++VT+NTL++GL RT     A+ LF+EM++    +   
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
            C P+V+TY+ +IDGLCK   V +A ELL  MK R  +P+VITY  L+ G C       A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             +  EM+D G  P++VT+N++++  C+  ++     L+  M  RG  P+ VTY +L+DG
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C VGR+  A  +   M+ KG   D+  YN+LIN  CK  +V++++ L R  +S  I+P 
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           V+TY++++ GL +   L +A +L+  ++     PD   ++T IDGLCK G V EA  +++
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +    C+  + TY+ LI+GLCK GR+  A  L  R+   G  P  +T +++I  LC   
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 485

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +D+A +L+ +ME  NC PS VT+  L+ G  +  +    VVLL +  A  +     +L 
Sbjct: 486 HLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALD 545

Query: 579 ----SKVVDLLSKDKKYRECLNQFRHLL 602
               S ++D L K  +  E L+ F+ ++
Sbjct: 546 TIAYSSLIDGLCKAGRVAEALDYFQEMI 573



 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 163/507 (32%), Positives = 268/507 (52%), Gaps = 21/507 (4%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + ++  L+  L KN + D    LF+ + S    P +   N L++ L + G    A  
Sbjct: 111 EPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMA 170

Query: 138 VLGRIL--RS------CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           +   +L  RS      C +PN +T++ LI+GLC   R+ +A  L + +    C P+V+T+
Sbjct: 171 LFQEMLDRRSHDMDDRC-SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITY 229

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
             L++GLC+      A ++  EM++   A C P++VTYNS++ GLC+   V  A  L+  
Sbjct: 230 TILVDGLCKESKVAAAWEVLREMLD---AGCVPNLVTYNSLLHGLCRARRVSDALALMRD 286

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  R   PNV+TY +LI G C V   K+A  +  +M+D G  PD++ +N +IN  CK  +
Sbjct: 287 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 346

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+   LL   +  G+ PD VTY+S++ G C   R+  A  L + + S+GC  DV  Y+ 
Sbjct: 347 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 406

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+  CK  KV++A  LY  M  +     V+TY+TL+ GL + G + +A  L+ +M    
Sbjct: 407 LIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 466

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
             P + T+ + I GLC    + EA+++ + +    C     TYN LI+G+C+M R+ +A 
Sbjct: 467 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAV 526

Query: 490 KLFHRLQHK-----GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
            L  + + +     G   D +  S++I  LCK G++ +A D   +M     +P  +T+  
Sbjct: 527 VLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSI 586

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           LL G     KKSK +  L  +  +++V
Sbjct: 587 LLEGL----KKSKDLHELRHLVLDQMV 609



 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 157/483 (32%), Positives = 261/483 (54%), Gaps = 15/483 (3%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-------NSNG 111
           N   + A   F+ M  ++ SP M ++  LL  L +  + +  ++LF+ +         + 
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
             P++   ++LI+ LCK    S A  +L  +     +P+ +T+  L++GLC E ++  A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
            + +++    C PN+VT+N+L++GLCR R    AL L  +M       C P+VVTY ++I
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG---CTPNVVTYGTLI 303

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           DGLCK G V  A  +L  M D+   P+++ YN LI G C  D   E+  L    +  G++
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PDVVT++++I   C+  ++D+  RLL  +  RG  PD + Y++L+DG C  G++  A +L
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 423

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           +  M   GC  DV +Y+ LI+  CK  +V++A  L   M+     PS +TYN+L+ GL  
Sbjct: 424 YEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 483

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNC----KCE 466
           + +L +A++L+++M+ ++  P + T+   I G+C+   V  AV +  QA   C       
Sbjct: 484 LNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTA 543

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           L    Y+ LI+GLCK GR+  A   F  +   G IPD +T S ++  L K   + +   L
Sbjct: 544 LDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHL 603

Query: 527 LLD 529
           +LD
Sbjct: 604 VLD 606



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/461 (32%), Positives = 233/461 (50%), Gaps = 45/461 (9%)

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------FGAICK-------- 221
           C P+V T+  L+ G CR      A + F+EM ++               +CK        
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 222 ------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                        D V Y +++ GL K+  +D+A  +L +M+D    PNV+TYNSLI G 
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN--- 326
           C  ++   A+ LF  M      P +VT+N +++   + GK+++   L + M+ R  +   
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 327 ----PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
               P+ +TY+ L+DG C   R+S+A EL  SM ++GC  DV +Y IL++  CK+ KV  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  + REML     P+++TYN+LL GL +   + DAL L+  M      P+  T+ T ID
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK G V +A  +   + +      +  YN LINGLCK  ++  +  L  R    G  P
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           DVVT S++I+ LC+  ++D+A  LLL ++++ C P  + + TL+ G  +  K  +   L 
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424

Query: 563 HKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
             MA +    +D+   S ++D L K  +  E      HLL 
Sbjct: 425 EVMAGDG-CDADVVTYSTLIDGLCKAGRVDEA-----HLLL 459



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 202/383 (52%), Gaps = 7/383 (1%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           IC+PDV TY +++ G C+ G +D+A+    +M+ +N+ PNV   + LI G C      +A
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
              F  M  +G+  D V + A+++   K+ ++D+   +L  M   G  P+ VTYNSL+DG
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML------- 391
            C      RA+ELF  M S  C   + +YN L++   +  K+E A+ L++EML       
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
            +R  P+VITY+ L+ GL +   +  A++L++ M+     PD  T+   +DGLCK   V 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
            A +V + + +  C   + TYN L++GLC+  R+  A  L   +  +G  P+VVT  T+I
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             LCK G++  A  +L DM  K   P  + +  L+ G  + ++  + + LL +  +  + 
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 572 VSDLSLSSKVVDLLSKDKKYREC 594
              ++ SS +  L   ++    C
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEAC 386


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 176/527 (33%), Positives = 286/527 (54%), Gaps = 10/527 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           PSP   ++  ++    +    D  +   K +N   + PD+F  N+LI+ LCK   T  A 
Sbjct: 222 PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKAS 281

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +L  ++    TP+TVTFN +++GLC  G+   A  L   +    C P+  T+NTLI+GL
Sbjct: 282 EMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+ +N   A  L +E V+  G +  PDVVTY+ + DGLCK G +D+A EL+ +M  +   
Sbjct: 342 CKQQNVDRAKDLVDEFVSS-GFV--PDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCT 398

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN++TYN+LI G C     ++A  L   ++ +G  PDVVT+  +++  CK+G++DK  ++
Sbjct: 399 PNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKM 458

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           +E M++RG  P  +TY +LM+G C  GR+  A  +F  MVSK C  D  +Y  L+N  CK
Sbjct: 459 VEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCK 518

Query: 377 DQKVEDAVCLYREMLSERIR--PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
             + ++A     + + + IR  P +  YN L+ G  + G L +   + + M     VP+ 
Sbjct: 519 SSRTKEA-----QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 573

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   +DGLCK+G V EA    +++ +  C   + +YN +I+GL K  + K A ++  +
Sbjct: 574 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 633

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +   G  PD VT +T++   CKE + D A  +L +M      P  VT+ TL+ G  Q N+
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                 L+H+M     VVS  +  + ++D L K+   ++ L    H+
Sbjct: 694 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHM 740



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 184/574 (32%), Positives = 281/574 (48%), Gaps = 77/574 (13%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++A      M+    +P   +F  ++  L K  +++   SL   +      P     N 
Sbjct: 277 TDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNT 336

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+ LCK      A  ++   + S F P+ VT++ L +GLC  GRI EA  L K+++   
Sbjct: 337 LISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKG 396

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C PN+VT+NTLI+GLC+   T  A +L E +V+  G +  PDVVTY  I+DGLCK+G +D
Sbjct: 397 CTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS-GFV--PDVVTYTIIVDGLCKEGRLD 453

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-------------- 287
           KA +++  M  R   P+VITY +L+ G C      EA  +F EM+               
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 513

Query: 288 ----------------NGVQ--PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
                           +G++  P +  +NA+++  CK+G++D++  + E M  RG  P+ 
Sbjct: 514 NGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 573

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA---------------- 373
            TYN +MDG C  G++  A     SM S GC  DV SYNI+I+                 
Sbjct: 574 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 633

Query: 374 -------------------NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
                               CK+++ +DAV + + M+   + P  +TYNTL+SGL Q   
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693

Query: 415 LGDALKLIDKMQLND-VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           LGDA +L+ +M  N  VV    T+ T ID LCK G + +A+ +   +     E    TYN
Sbjct: 694 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 753

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
             I+ LCK GRL  A  L   +     + D V+ +T+I  LCK  Q+D+A+ L  +M A 
Sbjct: 754 IFIDRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAV 810

Query: 534 N--CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
              C+ S  TF  L+  F +  +  + + LL  M
Sbjct: 811 KGLCITSH-TFNLLIDAFTKTKRLDEALTLLGLM 843



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 183/604 (30%), Positives = 293/604 (48%), Gaps = 82/604 (13%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+ F   M + K +P + ++ IL+  L K  + D    +   +   G+ PD    N +++
Sbjct: 245 ALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMD 304

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE-------------------- 164
            LCK G    A  +L  +      P+  T+N LI+GLC +                    
Sbjct: 305 GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVP 364

Query: 165 ---------------GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
                          GRI EA  L K+++   C PN+VT+NTLI+GLC+   T  A +L 
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELL 424

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           E +V+  G +  PDVVTY  I+DGLCK+G +DKA +++  M  R   P+VITY +L+ G 
Sbjct: 425 ESLVSS-GFV--PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481

Query: 270 CCVDDWKEAKCLFIEMMD------------------------------NGVQ--PDVVTF 297
           C      EA  +F EM+                               +G++  P +  +
Sbjct: 482 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVY 541

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           NA+++  CK+G++D++  + E M  RG  P+  TYN +MDG C  G++  A     SM S
Sbjct: 542 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 601

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            GC  DV SYNI+I+   K  K ++A  +  +M+   I P  +TYNTL++   +     D
Sbjct: 602 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 661

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI-ETYNCLI 476
           A+ ++  M    V PD+ T+ T I GL +   + +A ++   +    C +    TYN +I
Sbjct: 662 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTII 721

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           + LCK G LK A  L   +   G   + VT +  I  LCKEG++D+A+ LL +M+    +
Sbjct: 722 DRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT---L 778

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK----VVDLLSKDKKYR 592
             EV++ T++ G  +  +  +      K+A E + V  L ++S     ++D  +K K+  
Sbjct: 779 RDEVSYTTVIIGLCKAEQLDRA----SKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLD 834

Query: 593 ECLN 596
           E L 
Sbjct: 835 EALT 838



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 165/557 (29%), Positives = 258/557 (46%), Gaps = 49/557 (8%)

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
           G     ++  +L + K   T +  F      G     F  N  +  L + G +     + 
Sbjct: 89  GTLQPAVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMF 148

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
            R+L + + P++ T++ +I  LC   +I +A  +  K  V    P V  +  L    C+T
Sbjct: 149 ERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKT 208

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                AL++F         I  PD + YN+II G C+    D A E L +M +R + P+V
Sbjct: 209 GRLKDALEIFRN-------IPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDV 261

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
            TYN LI G C      +A  +  EM+D GV PD VTFN++++  CK GK ++ + LL +
Sbjct: 262 FTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAV 321

Query: 320 MIQR-----------------------------------GVNPDTVTYNSLMDGFCLVGR 344
           M +R                                   G  PD VTY+ L DG C  GR
Sbjct: 322 MAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGR 381

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           I  A EL   M  KGC  ++ +YN LI+  CK  K E A  L   ++S    P V+TY  
Sbjct: 382 IDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTI 441

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           ++ GL + G L  ALK+++ M      P   T+   ++GLC+ G V EA  +F+ + +  
Sbjct: 442 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 501

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           C      Y  L+NG CK  R K A K+   ++   P  DV   + ++   CKEG++D+  
Sbjct: 502 CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT-PYIDVY--NALMDGYCKEGRLDEIP 558

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           ++  DM  + CVP+  T+  ++ G  ++ K  +    L  M +    V D+   + ++D 
Sbjct: 559 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG-CVPDVVSYNIIIDG 617

Query: 585 L---SKDKKYRECLNQF 598
           L   SK K+ R+ L+Q 
Sbjct: 618 LFKASKPKEARQVLDQM 634



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 239/475 (50%), Gaps = 11/475 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+   + M+K   +P + ++T L+  L +  + D    +FK + S     D      L
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 512

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N  CK   T  A  V+  I     TP    +N L++G C EGR+ E   +F+ +    C
Sbjct: 513 VNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGC 569

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+N +++GLC+      A    E M     A C PDVV+YN IIDGL K     +
Sbjct: 570 VPNIKTYNIVMDGLCKHGKVDEAFPFLESM---HSAGCVPDVVSYNIIIDGLFKASKPKE 626

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+++L QM    I P+ +TYN+L+  FC  + + +A  +   M+  GV PD VT+N +I+
Sbjct: 627 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS 686

Query: 303 YNCKDGKMDKVNRLLELMIQRG-VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              +  ++     L+  M++ G V     TYN+++D  C  G + +A  L   M   G  
Sbjct: 687 GLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVE 746

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  +YNI I+  CK+ ++++A  L  EM + R     ++Y T++ GL +   L  A KL
Sbjct: 747 ANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASKL 803

Query: 422 IDKM-QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
             +M  +  +   S TF   ID   K   + EA+ +   +    C   + TYN +I  LC
Sbjct: 804 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLC 863

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           K+ ++  A +LF  +  +G +   V+ + +I+ LC +G+  +A  +L +M + +C
Sbjct: 864 KLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 918



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 138/302 (45%), Gaps = 8/302 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D MI+    P   ++  L+    K +++D  V + K +   G+ PD    N LI
Sbjct: 626 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 685

Query: 124 NCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + L +      A+ ++  +LR  C      T+N +I+ LC EG + +A  L   +     
Sbjct: 686 SGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGV 745

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + N VT+N  I+ LC+      A  L  EM          D V+Y ++I GLCK   +D+
Sbjct: 746 EANTVTYNIFIDRLCKEGRLDEASSLLSEMDT------LRDEVSYTTVIIGLCKAEQLDR 799

Query: 243 AKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           A +L  +M   + +     T+N LI  F       EA  L   M+  G  P V+T+N +I
Sbjct: 800 ASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVI 859

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              CK  K+DK   L + M  RG+   +V+Y  L+ G C  GR   A ++   M S  C 
Sbjct: 860 TCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 919

Query: 362 HD 363
            D
Sbjct: 920 ID 921



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 128/274 (46%), Gaps = 6/274 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG-LFPDLFVLNL 121
           ++AV     MIK    P   ++  L++ L++  +      L   +  NG +       N 
Sbjct: 660 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 719

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+ LCK G    A +++  +       NTVT+N  I+ LC EGR+ EA+ L  +++   
Sbjct: 720 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR 779

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              + V++ T+I GLC+      A KL  EMV   G        T+N +ID   K   +D
Sbjct: 780 ---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH--TFNLLIDAFTKTKRLD 834

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  LL  M  R  +P+VITYN +I   C +D   +A  LF EM   G+    V++  +I
Sbjct: 835 EALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI 894

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
              C  G+  +  ++LE M       D + +  +
Sbjct: 895 YGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDV 928


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 163/489 (33%), Positives = 280/489 (57%), Gaps = 4/489 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + +++ ++    +  + DT   LF+++  NG  P+L   N L++ LC+ G+   A+ 
Sbjct: 74  APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 133

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +      P+  +++ L+ GLC  G+I  A ++F+  +   C P+VV ++TLI GLC
Sbjct: 134 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 193

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +T     A KLFE+M       C+PDVVT+ +++DGLCK   + +A+++L  M+DRN  P
Sbjct: 194 KTGRLDEACKLFEKMRENS---CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 250

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NVITY+SLI G C     ++A+ +F  M+  G++P+VVT+N++I+  C    +D    L+
Sbjct: 251 NVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLM 310

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M   G  PD +TYN+L+DG C  GR   A  LF  M +K C  DV +Y+ LI   CK 
Sbjct: 311 EEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL 370

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           ++++ A  L+ +ML + + P V+T++TL+ G    G + DA +L+++M  +D  PD +T+
Sbjct: 371 ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 430

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            + +DG CK G ++EA +V + +    C+  + TY  LI+  C+ G+   A KL   +  
Sbjct: 431 TSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVG 490

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA-KNCVPSEVTFCTLLRGFVQNNKKS 556
            G  P+V+T  ++I   C  G +++A  +L  +E  +NC      +  ++ G  +  + S
Sbjct: 491 NGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMS 550

Query: 557 KVVVLLHKM 565
             + LL  +
Sbjct: 551 AALELLEAI 559



 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 157/452 (34%), Positives = 255/452 (56%), Gaps = 3/452 (0%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           ++    ++I+ LCK      A     ++ +    PN  T+N LING C   ++  A  L 
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           K++      PNVVT++T+I+G CR      A KLF +MV E G  C P++VTYN+++ GL
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV-ENG--CMPNLVTYNTLLSGL 122

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           C++G +D+A ELL +M++R + P+  +Y++L+ G C       A  +F +  +    PDV
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           V ++ +I   CK G++D+  +L E M +    PD VT+ +LMDG C   R+  A+++  +
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M  + C  +V +Y+ LI+  CK  +V DA  +++ M+   I P+V+TYN+L+ G      
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  AL L+++M     +PD  T+ T IDGLCK G   EA ++F  ++   C   + TY+C
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI G CK+ R+  A  LF  +  +  +PDVVT ST++   C  G +D A  LL +M A +
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
           C P   T+ +L+ GF +  +  +   +L +MA
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMA 454



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 157/512 (30%), Positives = 278/512 (54%), Gaps = 3/512 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA  +F  M K    P   ++ +L+    K  +      L K +  +GL P++   + +I
Sbjct: 25  EATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVI 84

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C+      A+ +  +++ +   PN VT+N L++GLC  G + EA  L  ++      
Sbjct: 85  HGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQ 144

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+  +++TL+ GLC+T    +ALK+FE+  N     C PDVV Y+++I GLCK G +D+A
Sbjct: 145 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSN---GDCPPDVVAYSTLIAGLCKTGRLDEA 201

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L  +M++ +  P+V+T+ +L+ G C  D  +EA+ +   M D    P+V+T++++I+ 
Sbjct: 202 CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDG 261

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G++     + + MI RG+ P+ VTYNSL+ GFC+   +  A  L   M + GC  D
Sbjct: 262 LCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPD 321

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +YN LI+  CK  +  +A  L+ +M ++   P VITY+ L+ G  ++  +  A  L D
Sbjct: 322 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 381

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M    V+PD  TF+T ++G C  G V +A ++ + +    C   + TY  L++G CK+G
Sbjct: 382 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 441

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+  A ++  R+  +G  P+VVT + +I   C+ G+   A  LL +M      P+ +T+ 
Sbjct: 442 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYR 501

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           +L+ GF       +   +L ++  ++   +D+
Sbjct: 502 SLIGGFCGTGDLEEARKMLERLERDENCKADM 533



 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 165/499 (33%), Positives = 262/499 (52%), Gaps = 36/499 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG-LFPDLFVLNL 121
           +EA    D M +    P   S+  L+  L K  + D  + +F+  NSNG   PD+   + 
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFED-NSNGDCPPDVVAYST 187

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI  LCK G    A  +  ++  +   P+ VTF  L++GLC   R+ EA ++ + +    
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMV---------------------------- 213
           C PNV+T+++LI+GLC+T     A ++F+ M+                            
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307

Query: 214 ---NEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
               E  A  C PD++TYN++IDGLCK G   +A  L   MK +  NP+VITY+ LI GF
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C ++    A+ LF +M+   V PDVVTF+ ++   C  G +D   RLLE M+    +PD 
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 427

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TY SL+DGFC VGR+  AR +   M  +GC+ +V +Y  LI+A C+  K   A  L  E
Sbjct: 428 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEE 487

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND-VVPDSFTFATYIDGLCKNG 448
           M+   ++P+VITY +L+ G    G+L +A K++++++ ++    D F +   +DGLC+ G
Sbjct: 488 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTG 547

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ-HKGPIPDVVTC 507
            +  A+++ +AI+      R + Y  LI GLC+   L  A ++   +   +   P+    
Sbjct: 548 RMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAY 607

Query: 508 STMIHWLCKEGQMDKANDL 526
             +I  L +EG+ ++AN L
Sbjct: 608 EAVIQELAREGRHEEANAL 626



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/400 (33%), Positives = 228/400 (57%), Gaps = 3/400 (0%)

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C+ NV+T+  +I+GLC+      A   F +M  + G +  P+  TYN +I+G CK   V 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKK-GTV--PNEWTYNVLINGFCKVHKVH 59

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  LL +MK+  + PNV+TY+++I GFC       A  LF +M++NG  P++VT+N ++
Sbjct: 60  RAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLL 119

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C++G MD+   LL+ M +RG+ PD  +Y++LM G C  G+I  A ++F    +  C 
Sbjct: 120 SGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCP 179

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            DV +Y+ LI   CK  ++++A  L+ +M      P V+T+  L+ GL +   L +A ++
Sbjct: 180 PDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 239

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ++ M+  +  P+  T+++ IDGLCK G V +A +VF+ +     E  + TYN LI+G C 
Sbjct: 240 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 299

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              + +A  L   +   G +PD++T +T+I  LCK G+  +AN L  DM+AK C P  +T
Sbjct: 300 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 359

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +  L+ GF +  +      L   M  + ++   ++ S+ V
Sbjct: 360 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 232/446 (52%), Gaps = 15/446 (3%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +  +EA   F+ M +    P + +FT L+  L K  +      + + +      P+
Sbjct: 194 KTGRL--DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 251

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   + LI+ LCK G    A  V  R++     PN VT+N LI+G C    +  A  L +
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++    C P+++T+NTLI+GLC+T     A +LF +M  +F   C PDV+TY+ +I G C
Sbjct: 312 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF---CNPDVITYSCLIGGFC 368

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   +D A+ L   M  + + P+V+T+++L+ G+C      +A+ L  EM+ +   PDV 
Sbjct: 369 KLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY 428

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+ ++++  CK G+M +  R+L+ M +RG  P+ VTY +L+D FC  G+ + A +L   M
Sbjct: 429 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEM 488

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS-----ERIRPSVITYNTLLSGLF 410
           V  G + +V +Y  LI   C    +E+A    R+ML      E  +  +  Y  ++ GL 
Sbjct: 489 VGNGVQPNVITYRSLIGGFCGTGDLEEA----RKMLERLERDENCKADMFAYRVMMDGLC 544

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR-NCKCELRI 469
           + G +  AL+L++ ++ +   P    +   I GLC+   + +A++V + +  + K     
Sbjct: 545 RTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNA 604

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRL 495
           E Y  +I  L + GR + A  L   L
Sbjct: 605 EAYEAVIQELAREGRHEEANALADEL 630


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  311 bits (797), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 193/537 (35%), Positives = 301/537 (56%), Gaps = 12/537 (2%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG-LFPDLFVLNLLI 123
           AV FF  M+ + P P +  F +L  ++AK++ Y T +SL K L+S G    D+  LN+ I
Sbjct: 58  AVDFFHRMLTLTPFPCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAI 117

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           NCLC M  T+  F VLG + +    P  VT N ++NGLC EG +  A  L +K+      
Sbjct: 118 NCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYH 177

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            N  T+  L+NGLC+  +T  AL+  ++MV        P+VV YN+I+DGLCK G V +A
Sbjct: 178 CNARTYGALVNGLCKIGDTSGALECLKKMVKRN---LGPNVVVYNAILDGLCKRGLVGEA 234

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCC-VDDWKEAKCLFIEMM-DNGVQPDVVTFNAMI 301
             LL +M   N+ PNV+TYN LI G C     W+E   LF EM+ + G+ PDV TF+ ++
Sbjct: 235 LGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILV 294

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV--SKG 359
           +  CK+G + +   ++  M++ GV P+ VTYNSL+ G+CL  ++  A  +F  MV   +G
Sbjct: 295 DGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEG 354

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C   V ++N LI+  CK ++V+ A+ L  EM+ + + P V T+ +L+ G  +V     A 
Sbjct: 355 CLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAAR 414

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +L   M+ +  VP+  T A  +DGL K     EAV +F+A+     +L I  YN +++G+
Sbjct: 415 ELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGM 474

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CKMG+L  A KL   +  KG   D  T + MI  LC+EG +D A +LL  M+   C P++
Sbjct: 475 CKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNK 534

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS---KDKKYRE 593
            ++   ++G ++    ++    L  M  +   V D + +  ++  LS   +DK ++E
Sbjct: 535 CSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPV-DATTAELLIRFLSANEEDKSFKE 590



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 98/204 (48%), Gaps = 3/204 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+     M+     P + ++T L+    + K+      LF  +  +G  P+L    ++
Sbjct: 376 DKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVV 435

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ L K  + S A  +   +++S    + V +N +++G+C  G++ +A +L   + V   
Sbjct: 436 LDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGL 495

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +  T+N +I GLCR      A +L  +M  E G  C P+  +YN  + GL +   + +
Sbjct: 496 KIDSYTYNIMIKGLCREGLLDDAEELLRKM-KENG--CPPNKCSYNVFVQGLLRKYDIAR 552

Query: 243 AKELLLQMKDRNINPNVITYNSLI 266
           +++ L  MKD+    +  T   LI
Sbjct: 553 SRKYLQIMKDKGFPVDATTAELLI 576



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 1/221 (0%)

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ-LNDVVPDSFTFATYI 441
           AV  +  ML+    P +  +N L   + +  +   A+ LI  +  L D   D  T    I
Sbjct: 58  AVDFFHRMLTLTPFPCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAI 117

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           + LC          V   +     E  + T N ++NGLC  G +  A  L  ++++ G  
Sbjct: 118 NCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYH 177

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            +  T   +++ LCK G    A + L  M  +N  P+ V +  +L G  +     + + L
Sbjct: 178 CNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGL 237

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           LH+M    +  + ++ +  +  L  +   +RE +  F  ++
Sbjct: 238 LHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMV 278


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  310 bits (794), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 161/489 (32%), Positives = 279/489 (57%), Gaps = 4/489 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + +++ ++    +  + DT   LF+++  NG  P+L   N L++ LC+ G+   A+ 
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +      P+  +++ L+ GLC  G+I  A ++F+  +   C P+VV ++TLI GLC
Sbjct: 253 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 312

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +      A KLFE+M       C+PDVVT+ +++DGLCK   + +A+++L  M+DRN  P
Sbjct: 313 KAGRLDEACKLFEKMRENS---CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 369

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NVITY+SLI G C     ++A+ +F  M+  G++P+VVT+N++I+  C    +D    L+
Sbjct: 370 NVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLM 429

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M   G  PD +TYN+L+DG C  GR   A  LF  M +K C  DV +Y+ LI   CK 
Sbjct: 430 EEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL 489

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           ++++ A  L+ +ML + + P V+T++TL+ G    G + DA +L+++M  +D  PD +T+
Sbjct: 490 ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 549

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            + +DG CK G ++EA +V + +    C+  + TY  LI+  C+ G+   A +L   +  
Sbjct: 550 TSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVG 609

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA-KNCVPSEVTFCTLLRGFVQNNKKS 556
            G  P+V+T  ++I   C  G +++A  +L  +E  +NC      +  ++ G  +  + S
Sbjct: 610 NGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMS 669

Query: 557 KVVVLLHKM 565
             + LL  +
Sbjct: 670 AALELLEAI 678



 Score =  301 bits (770), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 167/511 (32%), Positives = 278/511 (54%), Gaps = 8/511 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG++  ++A    + M +  P P    +  ++  L K +     +  F+ +       +
Sbjct: 71  KSGDL--DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE---KN 125

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +    ++I+ LCK      A     ++ +    PN  T+N LING C   ++  A  L K
Sbjct: 126 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 185

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PNVVT++T+I+G CR      A KLF +MV E G  C P++VTYN+++ GLC
Sbjct: 186 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV-ENG--CMPNLVTYNTLLSGLC 242

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           ++G +D+A ELL +M++R + P+  +Y++L+ G C       A  +F +  +    PDVV
Sbjct: 243 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 302

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            ++ +I   CK G++D+  +L E M +    PD VT+ +LMDG C   R+  A+++  +M
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             + C  +V +Y+ LI+  CK  +V DA  +++ M+   I P+V+TYN+L+ G      +
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             AL L+++M     +PD  T+ T IDGLCK G   EA ++F  ++   C   + TY+CL
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 482

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I G CK+ R+  A  LF  +  +  +PDVVT ST++   C  G +D A  LL +M A +C
Sbjct: 483 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 542

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            P   T+ +L+ GF +  +  +   +L +MA
Sbjct: 543 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMA 573



 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 160/533 (30%), Positives = 285/533 (53%), Gaps = 3/533 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA  +F  M K    P   ++ +L+    K  +      L K +  +GL P++   + +I
Sbjct: 144 EATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVI 203

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C+      A+ +  +++ +   PN VT+N L++GLC  G + EA  L  ++      
Sbjct: 204 HGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQ 263

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+  +++TL+ GLC+T    +ALK+FE+  N     C PDVV Y+++I GLCK G +D+A
Sbjct: 264 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSN---GDCPPDVVAYSTLIAGLCKAGRLDEA 320

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L  +M++ +  P+V+T+ +L+ G C  D  +EA+ +   M D    P+V+T++++I+ 
Sbjct: 321 CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDG 380

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G++     + + MI RG+ P+ VTYNSL+ GFC+   +  A  L   M + GC  D
Sbjct: 381 LCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPD 440

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +YN LI+  CK  +  +A  L+ +M ++   P VITY+ L+ G  ++  +  A  L D
Sbjct: 441 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 500

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M    V+PD  TF+T ++G C  G V +A ++ + +    C   + TY  L++G CK+G
Sbjct: 501 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 560

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+  A ++  R+  +G  P+VVT + +I   C+ G+   A  LL +M      P+ +T+ 
Sbjct: 561 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYR 620

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           +L+ GF       +   +L ++  ++   +D+     ++D L +  +    L 
Sbjct: 621 SLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALE 673



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 158/499 (31%), Positives = 271/499 (54%), Gaps = 6/499 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++  L   L + ++ D    + K     G+ P++F   ++I  LCK G    A  +L  +
Sbjct: 26  TYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEM 85

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
             S   P+   +NF+I+ LC      +A   F+ +    C+ NV+T+  +I+GLC+    
Sbjct: 86  RESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDGLCKANRL 142

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A   F +M  + G +  P+  TYN +I+G CK   V +A  LL +MK+  + PNV+TY
Sbjct: 143 PEATTYFAKMKKK-GTV--PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           +++I GFC       A  LF +M++NG  P++VT+N +++  C++G MD+   LL+ M +
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RG+ PD  +Y++LM G C  G+I  A ++F    +  C  DV +Y+ LI   CK  ++++
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDE 319

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+ +M      P V+T+  L+ GL +   L +A ++++ M+  +  P+  T+++ ID
Sbjct: 320 ACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLID 379

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK G V +A +VF+ +     E  + TYN LI+G C    + +A  L   +   G +P
Sbjct: 380 GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP 439

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D++T +T+I  LCK G+  +AN L  DM+AK C P  +T+  L+ GF +  +      L 
Sbjct: 440 DIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLF 499

Query: 563 HKMAAEKLVVSDLSLSSKV 581
             M  + ++   ++ S+ V
Sbjct: 500 DDMLKQAVLPDVVTFSTLV 518



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 166/544 (30%), Positives = 270/544 (49%), Gaps = 40/544 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A   F  M++    P + ++  LL+ L +N   D    L   +   GL PD F  + L
Sbjct: 213 DTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTL 272

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LCK G    A  V          P+ V ++ LI GLC  GR+ EA +LF+K+   +C
Sbjct: 273 MAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSC 332

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+VVTF  L++GLC+      A ++ E M +     C P+V+TY+S+IDGLCK G V  
Sbjct: 333 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN---CTPNVITYSSLIDGLCKTGQVRD 389

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+E+  +M  R I PNV+TYNSLI GFC  +    A  L  EM   G  PD++T+N +I+
Sbjct: 390 AQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLID 449

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+  + NRL   M  +  NPD +TY+ L+ GFC + RI  AR LF  M+ +    
Sbjct: 450 GLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP 509

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA---- 418
           DV +++ L+   C    V+DA  L  EM++    P V TY +L+ G  +VG + +A    
Sbjct: 510 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVL 569

Query: 419 -------------------------------LKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
                                           +L+++M  N V P+  T+ + I G C  
Sbjct: 570 KRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGT 629

Query: 448 GFVLEAVQVFQAI-RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           G + EA ++ + + R+  C+  +  Y  +++GLC+ GR+  A +L   ++  G  P    
Sbjct: 630 GDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI 689

Query: 507 CSTMIHWLCKEGQMDKANDLLLDME-AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
              +I  LC+  ++ KA ++L +M  ++   P+   +  +++   +  +  +   L  ++
Sbjct: 690 YVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 749

Query: 566 AAEK 569
              K
Sbjct: 750 LGNK 753



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 196/376 (52%), Gaps = 34/376 (9%)

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +V TYN + + L +   +D+   +L       I PNV TY  +I G C   D  +A  L 
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 283 IEMMDNGVQPDVVTFNAMINYNCK---------------------------DGKMDKVNR 315
            EM ++G  PD   +N +I+  CK                           DG + K NR
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDG-LCKANR 141

Query: 316 LLEL------MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           L E       M ++G  P+  TYN L++GFC V ++ RA  L   M   G   +V +Y+ 
Sbjct: 142 LPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYST 201

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           +I+  C+  KV+ A  L+R+M+     P+++TYNTLLSGL + G + +A +L+D+M+   
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + PD F++ T + GLCK G +  A++VF+   N  C   +  Y+ LI GLCK GRL  AC
Sbjct: 262 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEAC 321

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           KLF +++     PDVVT + ++  LCK  ++ +A  +L  ME +NC P+ +T+ +L+ G 
Sbjct: 322 KLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 381

Query: 550 VQNNKKSKVVVLLHKM 565
            +  +      +  +M
Sbjct: 382 CKTGQVRDAQEVFKRM 397



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 137/267 (51%), Gaps = 3/267 (1%)

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G   +V T+N +     +  ++D+   +L+     G+ P+  TY  ++ G C  G + +
Sbjct: 18  QGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDK 77

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A EL   M   G   D   YN +I+A CK +    A+  +R M  E+   +VIT+  ++ 
Sbjct: 78  ACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK---NVITWTIMID 134

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GL +   L +A     KM+    VP+ +T+   I+G CK   V  A  + + ++      
Sbjct: 135 GLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAP 194

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + TY+ +I+G C+  ++ TA KLF ++   G +P++VT +T++  LC+ G MD+A +LL
Sbjct: 195 NVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELL 254

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            +M  +   P + ++ TL+ G  +  K
Sbjct: 255 DEMRERGLQPDKFSYDTLMAGLCKTGK 281



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 118/268 (44%), Gaps = 3/268 (1%)

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           Q+G + +  TYN L +      RI     +  +    G   +V++Y ++I   CK   ++
Sbjct: 17  QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A  L  EM      P    YN ++  L +  N   AL     M+    V    T+   I
Sbjct: 77  KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNV---ITWTIMI 133

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCK   + EA   F  ++         TYN LING CK+ ++  A  L   ++  G  
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 193

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P+VVT ST+IH  C++ ++D A  L   M    C+P+ VT+ TLL G  +N    +   L
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           L +M    L     S  + +  L    K
Sbjct: 254 LDEMRERGLQPDKFSYDTLMAGLCKTGK 281


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 166/487 (34%), Positives = 268/487 (55%), Gaps = 3/487 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ +I M+P P +  F  ++  + K K     +SL K++   G+ P +F L++ 
Sbjct: 66  DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 125

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C +G    AF VLG +L+  + PN +T   ++ GLC  G + +A      +     
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + V + TLINGLC+   ++ A +L +EM    G + KP++V YN IID  CKD    K
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEME---GQVVKPNIVIYNMIIDSFCKDELTCK 242

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++L L++ D  I+P+++TY SLI GFC    W E K L  EM++  + P+V TFN +I+
Sbjct: 243 ARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLID 302

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ GKM +   +  LM++RG  PD VT+N+L+ G CL G +  AR+LF ++  +G   
Sbjct: 303 AFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILP 362

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV+SY ILI   CK +++++AV L+ EM  + +   ++ Y++L+ GL + G +  A +L 
Sbjct: 363 DVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELF 422

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             +  +   P+  T+   ID  CK   +   +++F+ +        + TYN LING CK 
Sbjct: 423 STINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKS 482

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            R++ A  L   +Q K   PD +T +++   LCK G++  A +L   M          T+
Sbjct: 483 KRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATY 542

Query: 543 CTLLRGF 549
             LL  F
Sbjct: 543 NVLLDAF 549



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 233/451 (51%), Gaps = 4/451 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ + FN +I  +        A  L K++      P++ T +  IN  C       A  +
Sbjct: 82  PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
              +V + G   +P+ +T  +++ GLC +G V KA +    +  + +  + + Y +LI G
Sbjct: 142 LG-IVLKRGY--QPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLING 198

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C +    +A  L  EM    V+P++V +N +I+  CKD    K   L   ++  G++PD
Sbjct: 199 LCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPD 258

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +TY SL+ GFC  G+    ++L   MV+K    +VY++N+LI+A C+  K+ +A  ++ 
Sbjct: 259 ILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFN 318

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+    +P ++T+NTL+SG    GN+ +A KL D +    ++PD +++   I G CK  
Sbjct: 319 LMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCK 378

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EAV +F  +R     L I  Y+ LI+GLCK GR+  A +LF  + + GP P+V+T +
Sbjct: 379 RIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYN 438

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +I   CK   +D   +L   M  K   P+ +T+  L+ G+ ++ +  + + LL  M ++
Sbjct: 439 ILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSK 498

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
            L    ++ +S + D L K  +  +    F+
Sbjct: 499 NLAPDSITYNS-LFDGLCKSGRISDAWELFK 528



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 168/312 (53%), Gaps = 9/312 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           ++ M   P + ++T L+    +  Q+  V  L   + +  + P+++  N+LI+  C+ G 
Sbjct: 250 IVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGK 309

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   +++    P+ VTFN LI+G C  G ++EA +LF  +      P+V ++  
Sbjct: 310 MIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTI 369

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKP---DVVTYNSIIDGLCKDGFVDKAKELLL 248
           LI G C+ +    A+ LF EM       CK    D+V Y+S+IDGLCK G +  A EL  
Sbjct: 370 LIIGYCKCKRIDEAVSLFNEMR------CKNMVLDIVLYSSLIDGLCKSGRISYAWELFS 423

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            + +    PNVITYN LI  FC + D      LF  M   G+ P V+T+N +IN  CK  
Sbjct: 424 TINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSK 483

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ +   LL +M  + + PD++TYNSL DG C  GRIS A ELF  M   G   DV +YN
Sbjct: 484 RIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYN 543

Query: 369 ILINANCKDQKV 380
           +L++A CK Q V
Sbjct: 544 VLLDAFCKAQDV 555



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 173/351 (49%), Gaps = 1/351 (0%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D A  L   + +    P+VI +N++I     +     A  L  +M+  GV P + T + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
            IN  C  G+M     +L ++++RG  P+ +T  ++M G C+ G + +A +   ++ ++G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              D   Y  LIN  CK  +  DA  L +EM  + ++P+++ YN ++    +      A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L  K+    + PD  T+ + I G C+ G   E  Q+   + N      + T+N LI+  
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C+ G++  A  +F+ +  +G  PD+VT +T+I   C  G + +A  L   +  +  +P  
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            ++  L+ G+ +  +  + V L ++M  + +V+ D+ L S ++D L K  +
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVL-DIVLYSSLIDGLCKSGR 414


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  308 bits (790), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 178/524 (33%), Positives = 286/524 (54%), Gaps = 23/524 (4%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK--NKQYDTVVSLFKRL 107
           + + +  S ++  ++A+  F  M++M PSP +  F  +L  L K  N  Y   +SL+ RL
Sbjct: 15  YSHSKFNSNHVDVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRL 74

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
             N + P +   N +INC C +G    AF VL +IL+  + P+T+T   LI GLC  G++
Sbjct: 75  QLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKV 134

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            EA      +       N V++  LINGLC+   T  AL++  ++    G +   +VV Y
Sbjct: 135 HEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKID---GKLVNTNVVMY 191

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           ++IID LCK+  V +A EL  QM  + ++P+V+T+++LI GFC V  +KEA  LF EM+ 
Sbjct: 192 STIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVL 251

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
             + PDV TFN +++  CK+G   +   +L +M++                   V ++++
Sbjct: 252 TNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKE------------------VNQVNK 293

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A+ +F  +  +    DV+SY I+I   CK + V++A+ L+ EM  + I P  +TY++L+ 
Sbjct: 294 AKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLID 353

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GL +   +  A +L+D+M       D  T+ +++  LCKN  V +AV + + I++   + 
Sbjct: 354 GLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQP 413

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            I TYN LI+GLCK GR + A  +F  L  KG    V T + MI+ LC EG  D+A  LL
Sbjct: 414 NINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLL 473

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             ME   C P  VT+ T++R   +N++  K   LL +M A  L+
Sbjct: 474 EKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLL 517



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 40/233 (17%)

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN--LGDALKLIDKMQLND 429
           N+N  D  V DA+  +  ML     PS+I +N +L  L +  N     A+ L  ++QLN 
Sbjct: 21  NSNHVD--VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNA 78

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P                                    I T+N +IN  C +G +  A 
Sbjct: 79  ITPS-----------------------------------IVTFNTVINCYCHLGEMDFAF 103

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +  ++   G  PD +T +T+I  LC  G++ +A      + A+    +EV++  L+ G 
Sbjct: 104 SVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGL 163

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +  +    + +L K+   KLV +++ + S ++D L K+K   E    +  ++
Sbjct: 164 CKMGETRAALQVLRKIDG-KLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMI 215


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 194/599 (32%), Positives = 307/599 (51%), Gaps = 54/599 (9%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK-NKQYDTV---- 100
            + +F+ DR +SG++ S++A+  FD ++       +T+F  LLT +++ + ++ T+    
Sbjct: 116 QLERFIADRAQSGSLASHDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQL 175

Query: 101 -VSLFKRLN---SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNF 156
            +SLF R+    S+ + PD    ++LI C C+MG     F V G IL++ +  N + FN 
Sbjct: 176 GISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQ 235

Query: 157 LINGLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
           L+ GLC   R+ EA   L  ++  F C PNVV++NTL+ G C       AL+L   M ++
Sbjct: 236 LLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADD 295

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            G  C PDVV+YN++I+G  ++G VDKA  L LQM DR I P+V+TYN++I G C     
Sbjct: 296 QGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVV 355

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
             AK +F +M+D GV+P   T+N +I+     GK  +V RLLE M    + PD   Y  L
Sbjct: 356 DRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALL 415

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHD---------------------VYSYNILINAN 374
           +D  C  GR + AR +F S++ KG + D                     V +Y  LI+A 
Sbjct: 416 LDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDAL 475

Query: 375 CKDQKVEDAVC-----------------------LYREMLSERIRPSVITYNTLLSGLFQ 411
           CK  +V+DA+                        L  EML + IR  V+ +NTL+  L +
Sbjct: 476 CKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCR 535

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G + +A +LI+ M    V PD  ++ T +DG C  G   EA ++   + +   +    T
Sbjct: 536 EGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFT 595

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN L++G CK  R+  A  L   +   GP PDVVT +T++H L + G+  +A +L L+M 
Sbjct: 596 YNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMI 655

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
                    T+  +L G  +NN   +   +   + ++ L +  ++ +  +  LL   KK
Sbjct: 656 NSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKK 714



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 168/534 (31%), Positives = 278/534 (52%), Gaps = 41/534 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+  ++    +  Q D   +LF ++   G+ PD+   N +I+ LCK  +   A  V
Sbjct: 302 PDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAV 361

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++L     P+  T+N LI+G  + G+  E  RL ++++    +P+   +  L++ LC+
Sbjct: 362 FQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCK 421

Query: 199 TRNTLVALKLFEE----------MVNEFGAIC----------KPDVVTYNSIIDGLCKDG 238
                 A  +F+           M++E  A+C           P+VV Y ++ID LCK G
Sbjct: 422 NGRCTEARNIFDSVIRKGIKPDAMIDE--AVCIFDKMRQQGLSPNVVNYGALIDALCKLG 479

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLI---CGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            VD A               ++ +N +I    G C V+ W++A+ L  EM+D G++ DVV
Sbjct: 480 RVDDA---------------ILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVV 524

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            FN ++   C++G++ +  RL+ELM++ GV PD ++YN+L+DG CL GR   A +L   M
Sbjct: 525 VFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVM 584

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           VS G + + ++YN L++  CK ++++DA  L REML     P V+TYNT+L GLFQ G  
Sbjct: 585 VSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRF 644

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A +L   M  +    D +T+   ++GLCKN  V EA ++FQ++ +   +L I T+N +
Sbjct: 645 SEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIM 704

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I  L K G+ + A  LF  +   G +PDV T   +   L KEG +++   L   ME    
Sbjct: 705 IGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGT 764

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
            P+      L+R F+     S+    L K+  EK    + S +S ++ L S+ +
Sbjct: 765 APNSRMLNALVRRFLHRGDISRAGAYLSKL-DEKNFSLEASTASMLISLYSRGE 817



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 3/241 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EA    D M+ +   P   ++  LL    K ++ D   SL + +  NG  PD+   N 
Sbjct: 574 TDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNT 633

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +++ L + G  S A  +   ++ S    +  T+N ++NGLC    + EA ++F+ L    
Sbjct: 634 ILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKG 693

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              +++TFN +I  L +      A+ LF   ++ +G +  PDV TY  I + L K+G ++
Sbjct: 694 LQLHIITFNIMIGALLKGGKKEDAMDLF-ATISAYGLV--PDVETYCLIAENLIKEGSLE 750

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +   L   M++    PN    N+L+  F    D   A     ++ +     +  T + +I
Sbjct: 751 ELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810

Query: 302 N 302
           +
Sbjct: 811 S 811


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 172/482 (35%), Positives = 266/482 (55%), Gaps = 41/482 (8%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K  ++   E +  F  MI+ +P P +  F+ +L+ +AK+K YD V+SLF  +   G+  D
Sbjct: 44  KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD 103

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           L+  N++INC                                   LC   R + A  +  
Sbjct: 104 LYSYNIVINC-----------------------------------LCRCSRFVIALSVVG 128

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+  F  +P+VVT ++LING C+      A+ L  +M  E G   +PDVV YN+IIDG C
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM-EEMGF--RPDVVIYNTIIDGSC 185

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G V+ A EL  +M+   +  + +TYNSL+ G CC   W +A  L  +M+   + P+V+
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           TF A+I+   K+GK  +  +L E M +R V+PD  TYNSL++G C+ GR+  A+++   M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V+KGC  DV +YN LIN  CK ++V++   L+REM    +    ITYNT++ G FQ G  
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             A ++  +M   D  P+  T++  + GLC N  V +A+ +F+ ++  + EL I TYN +
Sbjct: 366 DAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+G+CK+G ++ A  LF  L  KG  PDVV+ +TMI   C++ Q DK++ L   M+    
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482

Query: 536 VP 537
           +P
Sbjct: 483 LP 484



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 230/431 (53%), Gaps = 6/431 (1%)

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           ++++S   P+ V F+ +++ +           LF  + V     ++ ++N +IN LCR  
Sbjct: 59  KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
             ++AL +  +M+ +FG   +PDVVT +S+I+G C+   V  A +L+ +M++    P+V+
Sbjct: 119 RFVIALSVVGKMM-KFGY--EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            YN++I G C +    +A  LF  M  +GV+ D VT+N+++   C  G+     RL+  M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           + R + P+ +T+ +++D F   G+ S A +L+  M  +    DV++YN LIN  C   +V
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A  +   M+++   P V+TYNTL++G  +   + +  KL  +M    +V D+ T+ T 
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I G  + G    A ++F  + +      I TY+ L+ GLC   R++ A  LF  +Q    
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
             D+ T + +IH +CK G ++ A DL   +  K   P  V++ T++ GF +  +  K  +
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472

Query: 561 LLHKMAAEKLV 571
           L  KM  + L+
Sbjct: 473 LYRKMQEDGLL 483



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/423 (29%), Positives = 212/423 (50%), Gaps = 10/423 (2%)

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDG 238
           +P +V F +   G  RT +T  +    EE ++ F  + +    P +V ++ ++  + K  
Sbjct: 26  NPVIVPFISRFWG--RTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSK 83

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
             D    L   M+   I  ++ +YN +I   C    +  A  +  +MM  G +PDVVT +
Sbjct: 84  NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVS 143

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++IN  C+  ++     L+  M + G  PD V YN+++DG C +G ++ A ELF  M   
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G R D  +YN L+   C   +  DA  L R+M+   I P+VIT+  ++    + G   +A
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           +KL ++M    V PD FT+ + I+GLC +G V EA Q+   +    C   + TYN LING
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK  R+    KLF  +  +G + D +T +T+I    + G+ D A ++   M+++   P+
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PN 380

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             T+  LL G   N +  K +VL   M   ++ + D++  + V+  + K     +  + F
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL-DITTYNIVIHGMCKIGNVEDAWDLF 439

Query: 599 RHL 601
           R L
Sbjct: 440 RSL 442


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  304 bits (779), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 176/516 (34%), Positives = 285/516 (55%), Gaps = 8/516 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  MI+   S    ++  L+  L K++  +    L + + S G  PD    N +
Sbjct: 62  DEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTI 121

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF-- 180
           ++ LC+MG  S A      +    ++P+ V +N L++ L  EG++ EA  LFK +++   
Sbjct: 122 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+++T+NTLI+G CR   T  A+KLF++++ + G +  PD VTYNSI+ GL +   +
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAK-GYM--PDTVTYNSILLGLARKSNM 238

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D+A+E+  +M D    PN  TY+ ++ G C V +      L+ EM +    PDV+  NA+
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  CK  K+D  +++LE M + G  PD VTYN L+DG C    + +A ELF +MV  GC
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D+ SY++++N  CK  KV DA  L+  M+  ++ P V+T+N L+ GL + G L +A  
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 418

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L+D M  ++V+PD  T  T + GLC++    EAV++FQ +        +  +N ++ GLC
Sbjct: 419 LLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLC 478

Query: 481 KMGRLKTACKLFHRL-QHKGPI-PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           + G+L  A   F  + +  G   PDVVT +T+++ L + G++D+A D    M    C P 
Sbjct: 479 REGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPD 538

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
            V + TL+ G  +  +  +   L   M  EK  +SD
Sbjct: 539 YVAYNTLMNGLRKQGRHIQADRLTQAM-KEKGFLSD 573



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 164/498 (32%), Positives = 271/498 (54%), Gaps = 6/498 (1%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           +   G  PD+   + +I+ LCK G  + A  ++  +      P+  T+  +++ LC  G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           + EA  LF K+    C  N V +N LINGLC+  N   A KL EEM ++     +PD +T
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG---YEPDNIT 117

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF--IE 284
           YN+I+ GLC+ G V +AK+    M  R  +P+V+ YN L+          EA  LF  ++
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M D  V PD++T+N +I+  C+  K D+  +L + +I +G  PDTVTYNS++ G      
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A E+F  MV  GC  +  +Y+I+++ +C+   +   + LY EM  +R  P V+  N 
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNA 297

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           ++  L +   + DA K++++M     VPD  T+   +DGLCK   V +A ++F  + +  
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           C   I +Y+ ++NGLCK  ++  A  LF R+  +  +PDVVT + ++  LCK G++D+A 
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           DLL  M   N +P  VT  TL+ G  ++ +  + V L   M  EK  V+D+   + V+  
Sbjct: 418 DLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYM-VEKGTVADVLPHNIVLAG 476

Query: 585 LSKDKKYRECLNQFRHLL 602
           L ++ K  + L  F+ ++
Sbjct: 477 LCREGKLAQALLFFKSMV 494



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 266/507 (52%), Gaps = 10/507 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + +++ +++ L K  +    + + + +   G+ PD+    ++++ LC+ G    A  
Sbjct: 7   EPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADE 66

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  +++    + NTV +N LINGLC +  I  A +L +++     +P+ +T+NT+++GLC
Sbjct: 67  LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLC 126

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL--LQMKDRNI 255
           R      A + F+ M +   +   PDVV YN ++D L K+G V +A  L   + M DR +
Sbjct: 127 RMGKVSEAKQFFDSMPSRGYS---PDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKV 183

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P++ITYN+LI GFC V+   EA  LF +++  G  PD VT+N+++    +   MD+   
Sbjct: 184 APDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE 243

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           + + M+  G  P+  TY+ ++ G C VG ++R  EL+  M  K    DV   N +I+  C
Sbjct: 244 MFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLC 303

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K +KV+DA  +  EM      P V+TYN LL GL +   +  A +L   M  N   PD  
Sbjct: 304 KAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 363

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           +++  ++GLCK   V +A  +F  +   K    + T+N L++GLCK G+L  A  L   +
Sbjct: 364 SYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVM 423

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
                +PD VTC+T++H LC++ + D+A  L   M  K  V   +    +L G  +  K 
Sbjct: 424 SEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKL 483

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           ++ ++    M     V SD   S  VV
Sbjct: 484 AQALLFFKSM-----VKSDGEFSPDVV 505



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 160/340 (47%), Gaps = 40/340 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M+    +P   +++I+L+   +       + L++ +      PD+ + N +
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK      A  VL  + +    P+ VT+N L++GLC    + +A  LF  +    C
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++V+++ ++NGLC+T     A  LF+ M+        PDVVT+N ++DGLCK G +D+
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIER---KLVPDVVTFNILMDGLCKAGKLDE 415

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV------------ 290
           AK+LL  M + N+ P+ +T  +L+ G C      EA  LF  M++ G             
Sbjct: 416 AKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLA 475

Query: 291 -------------------------QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
                                     PDVVT+  ++N   + G++D+     + M   G 
Sbjct: 476 GLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGC 535

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
            PD V YN+LM+G    GR  +A  L  +M  KG   D +
Sbjct: 536 APDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 172/482 (35%), Positives = 262/482 (54%), Gaps = 24/482 (4%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P+P +  F  +L  L K   Y  VVSL +++  NGL  +L  L++LINC  ++G  + +F
Sbjct: 8   PTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSF 67

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            V   IL+  +  + +TF  LI GLC +G I +A     K+       N V++ TLINGL
Sbjct: 68  SVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGL 127

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+   T  AL+    +    G + +PDVV YN+IIDGLCKD  V+ A  L  +M  + I 
Sbjct: 128 CKVGQTRAALEFLRRID---GKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRIC 184

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+V+TYN+LICG C +   K+A  L  +M+   + P V TF+ +I+  CK+GKM +   +
Sbjct: 185 PSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNV 244

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
             +M++  V P+ VTYNSLMDG  LV  + +A+ +F +M+                    
Sbjct: 245 FAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMI-------------------- 284

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
            + V++A+ L+ EM  ++I P ++ YN+L+ GL + G    ALK I +M      PD FT
Sbjct: 285 -KMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFT 343

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + + +D LCKN  V +A+++   +++   +  + TYN LINGLCK GRLK A K+F  L 
Sbjct: 344 YNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLL 403

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG   DV T + MI   CK+G  D+   ++  M+   C P       ++R      +  
Sbjct: 404 VKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGEND 463

Query: 557 KV 558
           K 
Sbjct: 464 KA 465



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 218/434 (50%), Gaps = 21/434 (4%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           TP+   F  ++  L           L +++       N+VT + LIN   +     ++  
Sbjct: 9   TPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFS 68

Query: 208 LFEEMVNE-FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +F  ++ + +G+    D +T+ ++I GLC  G + KA     ++  +    N ++Y +LI
Sbjct: 69  VFANILKKGYGS----DAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLI 124

Query: 267 CGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
            G C V   + A   F+  +D   VQPDVV +N +I+  CKD  ++    L   M+ + +
Sbjct: 125 NGLCKVGQTRAA-LEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRI 183

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P  VTYN+L+ G C++ ++  A  L   M+ +     VY+++ILI+A CK+ K+++A  
Sbjct: 184 CPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKN 243

Query: 386 LYREMLSERIRPSVITYNTLLSG------------LFQ--VGNLGDALKLIDKMQLNDVV 431
           ++  M+ E ++P+++TYN+L+ G            +F   +  + +A+ L ++M    + 
Sbjct: 244 VFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIY 303

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD   + + IDGLCK+G    A++    +        I TYN L++ LCK   +  A +L
Sbjct: 304 PDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIEL 363

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
             +L+ +G  P V T + +I+ LCK G++  A  +  D+  K       T+  +++GF +
Sbjct: 364 LTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCK 423

Query: 552 NNKKSKVVVLLHKM 565
                + + ++ KM
Sbjct: 424 KGLFDETLAMVSKM 437



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 179/365 (49%), Gaps = 17/365 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A++F D ++         S+  L+  L K  Q    +   +R++   + PD+ + N +
Sbjct: 99  HKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTI 158

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK  + + AF +   ++     P+ VT+N LI GLC   ++ +A  L  K+ +   
Sbjct: 159 IDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDI 218

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL-------- 234
           +P V TF+ LI+  C+      A  +F  M+ E     KP++VTYNS++DG         
Sbjct: 219 NPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKE---DVKPNIVTYNSLMDGHHLVNVVKK 275

Query: 235 CKDGF------VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            K  F      VD+A  L  +M  + I P+++ YNSLI G C       A     EM   
Sbjct: 276 AKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYR 335

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G  PD+ T+N++++  CK+  +DK   LL  +  +G+ P   TYN L++G C  GR+  A
Sbjct: 336 GQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDA 395

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            ++F  ++ KG   DVY+YN +I   CK    ++ + +  +M      P       ++  
Sbjct: 396 EKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRS 455

Query: 409 LFQVG 413
           LF  G
Sbjct: 456 LFDKG 460



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 14/196 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F+ M   +  P M  +  L+  L K+ +    +     ++  G  PD+F  N L
Sbjct: 288 DEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSL 347

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LCK      A  +L ++      P+  T+N LINGLC  GR+ +A ++F+ L V   
Sbjct: 348 LDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGY 407

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEE---MVNEF-GAICKPDVVTYNSIIDGLCKDG 238
           + +V T+N +I G C+         LF+E   MV++   + C PD      II  L   G
Sbjct: 408 NTDVYTYNAMIKGFCKK-------GLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKG 460

Query: 239 FVDKA---KELLLQMK 251
             DKA   +E++++ K
Sbjct: 461 ENDKAGKFREMIVRGK 476


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 169/466 (36%), Positives = 260/466 (55%), Gaps = 41/466 (8%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI+ +P P +  F+ +L+ +AK+K YD V+SLF  +   G+  DL+  N++INC      
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC------ 54

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
                                        LC   R + A  +  K+  F  +P+VVT ++
Sbjct: 55  -----------------------------LCRCSRFVIALSVVGKMMKFGYEPDVVTVSS 85

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LING C+      A+ L  +M  E G   +PDVV YN+IIDG CK G V+ A EL  +M+
Sbjct: 86  LINGFCQGNRVFDAIDLVSKM-EEMGF--RPDVVIYNTIIDGSCKIGLVNDAVELFDRME 142

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              +  + +TYNSL+ G CC   W +A  L  +M+   + P+V+TF A+I+   K+GK  
Sbjct: 143 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS 202

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +  +L E M +R V+PD  TYNSL++G C+ GR+  A+++   MV+KGC  DV +YN LI
Sbjct: 203 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 262

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N  CK ++V++   L+REM    +    ITYNT++ G FQ G    A ++  +M   D  
Sbjct: 263 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSR 319

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  T++  + GLC N  V +A+ +F+ ++  + EL I TYN +I+G+CK+G ++ A  L
Sbjct: 320 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 379

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           F  L  KG  PDVV+ +TMI   C++ Q DK++ L   M+    +P
Sbjct: 380 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 225/423 (53%), Gaps = 6/423 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ V F+ +++ +           LF  + V     ++ ++N +IN LCR    ++AL +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M+ +FG   +PDVVT +S+I+G C+   V  A +L+ +M++    P+V+ YN++I G
Sbjct: 68  VGKMM-KFGY--EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 124

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C +    +A  LF  M  +GV+ D VT+N+++   C  G+     RL+  M+ R + P+
Sbjct: 125 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 184

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +T+ +++D F   G+ S A +L+  M  +    DV++YN LIN  C   +V++A  +  
Sbjct: 185 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 244

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+++   P V+TYNTL++G  +   + +  KL  +M    +V D+ T+ T I G  + G
Sbjct: 245 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 304

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
               A ++F  + +      I TY+ L+ GLC   R++ A  LF  +Q      D+ T +
Sbjct: 305 RPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 361

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +IH +CK G ++ A DL   +  K   P  V++ T++ GF +  +  K  +L  KM  +
Sbjct: 362 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 421

Query: 569 KLV 571
            L+
Sbjct: 422 GLL 424



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 193/380 (50%), Gaps = 4/380 (1%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P +V ++ ++  + K    D    L   M+   I  ++ +YN +I   C    +  A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             +MM  G +PDVVT +++IN  C+  ++     L+  M + G  PD V YN+++DG C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           +G ++ A ELF  M   G R D  +YN L+   C   +  DA  L R+M+   I P+VIT
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +  ++    + G   +A+KL ++M    V PD FT+ + I+GLC +G V EA Q+   + 
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
              C   + TYN LING CK  R+    KLF  +  +G + D +T +T+I    + G+ D
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A ++   M+++   P+  T+  LL G   N +  K +VL   M   ++ + D++  + V
Sbjct: 308 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL-DITTYNIV 363

Query: 582 VDLLSKDKKYRECLNQFRHL 601
           +  + K     +  + FR L
Sbjct: 364 IHGMCKIGNVEDAWDLFRSL 383



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 174/334 (52%), Gaps = 6/334 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+     M +M   P +  +  ++    K    +  V LF R+  +G+  D    N L+
Sbjct: 98  DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 157

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC  G  S A  ++  ++     PN +TF  +I+    EG+  EA +L++++     D
Sbjct: 158 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 217

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V T+N+LINGLC       A ++ + MV +    C PDVVTYN++I+G CK   VD+ 
Sbjct: 218 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG---CLPDVVTYNTLINGFCKSKRVDEG 274

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L  +M  R +  + ITYN++I G+        A+ +F  M     +P++ T++ ++  
Sbjct: 275 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYG 331

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C + +++K   L E M +  +  D  TYN ++ G C +G +  A +LF S+  KG + D
Sbjct: 332 LCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 391

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           V SY  +I+  C+ ++ + +  LYR+M  + + P
Sbjct: 392 VVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 153/299 (51%), Gaps = 10/299 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+AV  FD M +        ++  L+  L  + ++     L + +    + P++     +
Sbjct: 132 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 191

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K G  S A  +   + R C  P+  T+N LINGLC  GR+ EA ++   +    C
Sbjct: 192 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 251

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VVT+NTLING C+++      KLF EM    G +   D +TYN+II G  + G  D 
Sbjct: 252 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR-GLV--GDTITYNTIIQGYFQAGRPDA 308

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWK--EAKCLFIEMMDNGVQPDVVTFNAM 300
           A+E+  +M  R   PN+ TY+ L+ G C   +W+  +A  LF  M  + ++ D+ T+N +
Sbjct: 309 AQEIFSRMDSR---PNIRTYSILLYGLCM--NWRVEKALVLFENMQKSEIELDITTYNIV 363

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           I+  CK G ++    L   +  +G+ PD V+Y +++ GFC   +  ++  L+  M   G
Sbjct: 364 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 422



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 130/287 (45%), Gaps = 35/287 (12%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           MIQ    P  V ++ ++              LF  M   G  HD+YSYNI+IN  C+  +
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
              A+ +  +M+     P V+T ++L++G  Q   + DA+ L+ KM+     PD   + T
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC------------------- 480
            IDG CK G V +AV++F  +          TYN L+ GLC                   
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 481 ----------------KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                           K G+   A KL+  +  +   PDV T +++I+ LC  G++D+A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +L  M  K C+P  VT+ TL+ GF ++ +  +   L  +MA   LV
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 172/512 (33%), Positives = 287/512 (56%), Gaps = 22/512 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F  M+ M P P +  FT +L  +AK + Y T + L+  +   G+ P     N+L
Sbjct: 36  DDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNIL 95

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C MG    AF V+G+IL+    PN VTF  L+ G C   ++++A  ++ ++     
Sbjct: 96  INCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRI 155

Query: 183 DPNVVTFNTLINGLCRTR--NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
             + V + TLINGLC+++      A++L ++M  E   + KP+++ YN+++ GLCKDG +
Sbjct: 156 RFDDVLYGTLINGLCKSKIGKPRAAVQLLQKM--EERQLVKPNLIMYNTVVHGLCKDGNI 213

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICG----------------FCCVDDWKEAKCLFIE 284
           ++A+ L  +M  + I P++ TY+SLI G                FC  +   EA+ LF  
Sbjct: 214 NEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNV 273

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M++ G Q D++ +N ++N  C + K+ +  +L  +M++RG  PDT+TY  LM G+CL+ +
Sbjct: 274 MIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDK 333

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  AR LF  M+ +G   DV+SYNILI   CK ++V +A+ L  +M  + + P++ITYN+
Sbjct: 334 VDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNS 393

Query: 405 LLSGLFQVGNLGDALKLIDKMQL-NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-IRN 462
           ++ GL + G + DA KL+D+M       PD  T+   ++ LC+   V +A+  F+  I  
Sbjct: 394 VVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFE 453

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 + +YN LI+G CK  RL  A  LF+ +  K  +PD+VT + ++  L    Q+DK
Sbjct: 454 RSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDK 513

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           A  LL+ +  +   P+  T+  L+ G  +  +
Sbjct: 514 AIALLVQIVDQGISPNLRTYNILINGLHKGGR 545



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 194/372 (52%), Gaps = 20/372 (5%)

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK   +D A  L  +M D +  P+++ +  ++     +  +  A  L+  M   GV P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           VTFN +IN  C  G+MD    ++  +++ G  P+ VT+ +LM GFC+  ++  A  ++  
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 355 MVSKGCRHDVYSYNILINANCKDQ--KVEDAVCLYREMLSER-IRPSVITYNTLLSGLFQ 411
           MV++  R D   Y  LIN  CK +  K   AV L ++M   + ++P++I YNT++ GL +
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK-----------NGFVL-----EAVQ 455
            GN+ +A  L  KM +  + PD FT+++ I GLC+           NGF L     EA +
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +F  +     +  I  YN L+NG C   ++  A KLFH +  +G  PD +T + ++H  C
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
              ++D+A +L   M  +  VP   ++  L++G+ +  +  + + LL  M  + LV + +
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 576 SLSSKVVDLLSK 587
           + +S VVD L K
Sbjct: 390 TYNS-VVDGLCK 400



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 194/394 (49%), Gaps = 33/394 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG----ITS- 133
           P +  +  ++  L K+   +    L  ++   G+FPD+F  + LI  LC+ G    +TS 
Sbjct: 195 PNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSL 254

Query: 134 -GAFVVLGRI--LRSCFT--------PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
              F +  ++   R  F          + + +N L+NG C   ++ EA +LF  +     
Sbjct: 255 LNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGE 314

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ +T+  L++G C       A  LF  M+ E G +  PDV +YN +I G CK   V +
Sbjct: 315 QPDTITYTILMHGYCLIDKVDEARNLFHGMI-ERGLV--PDVWSYNILIKGYCKFERVGE 371

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFC----CVDDWKEAKCLFIEMMDNGVQP--DVVT 296
           A  LL  M  +N+ PN+ITYNS++ G C     +D WK      ++ M    QP  DV T
Sbjct: 372 AMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWK-----LVDEMHYCCQPPPDVTT 426

Query: 297 FNAMINYNCKDGKMDKVNRLLE-LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           +N ++   C+   ++K     + L+ +R   P+  +YN L+ G C   R+  A  LF  M
Sbjct: 427 YNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHM 486

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             K    D+ +YNIL++A    Q+++ A+ L  +++ + I P++ TYN L++GL + G  
Sbjct: 487 CFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRP 546

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
             A K+   + +    PD  T+   I+ LCK G 
Sbjct: 547 KTAQKISLYLSIRGYHPDVKTYI--INELCKGGL 578



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 159/315 (50%), Gaps = 5/315 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F+ MI+      + ++ IL+     N +      LF  +   G  PD     +L
Sbjct: 265 DEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTIL 324

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C +     A  +   ++     P+  ++N LI G C   R+ EA  L + + +   
Sbjct: 325 MHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNL 384

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN++T+N++++GLC++   L A KL +EM   +     PDV TYN +++ LC+   V+K
Sbjct: 385 VPNIITYNSVVDGLCKSGGILDAWKLVDEM--HYCCQPPPDVTTYNILLESLCRIECVEK 442

Query: 243 AKELLLQMK-DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           A      +  +R+  PNV +YN LI G C      EA  LF  M    + PD+VT+N ++
Sbjct: 443 AIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILL 502

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +      ++DK   LL  ++ +G++P+  TYN L++G    GR   A+++ + +  +G  
Sbjct: 503 DALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYH 562

Query: 362 HDVYSYNILINANCK 376
            DV +Y  +IN  CK
Sbjct: 563 PDVKTY--IINELCK 575



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 108/241 (44%), Gaps = 38/241 (15%)

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
           R  ++S  +   + CK   ++DAV L+  M+     PS++ +  +L  + ++     A+ 
Sbjct: 16  RIHLHSQPLPSQSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAID 75

Query: 421 LIDKMQLNDVV-----------------------------------PDSFTFATYIDGLC 445
           L   M+   VV                                   P+  TF T + G C
Sbjct: 76  LYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFC 135

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC--KMGRLKTACKLFHRLQHKGPI-P 502
            N  +L+A+ ++  +   +       Y  LINGLC  K+G+ + A +L  +++ +  + P
Sbjct: 136 VNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKP 195

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           +++  +T++H LCK+G +++A  L   M  +   P   T+ +L+ G  +  ++ +V  LL
Sbjct: 196 NLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLL 255

Query: 563 H 563
           +
Sbjct: 256 N 256


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  301 bits (772), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 171/497 (34%), Positives = 274/497 (55%), Gaps = 10/497 (2%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           +N   + PD+F  N+LI+ LCK   T  A  +L  ++    TP+TVTFN +++GLC  G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
              A  L   +    C P+  T+NTLI+GLC+ +N   A  L +E V+  G +  PDVVT
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSS-GFV--PDVVT 117

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+ + DGLCK G +D+A EL+ +M      PN++TYN+LI G C     ++A  L   ++
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV 177

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +G  PDVVT+  +++  CK+G++DK  +++E M++RG  P  +TY +LM+G C  GR+ 
Sbjct: 178 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 237

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR--PSVITYNT 404
            A  +F  MVSK C  D  +Y  L+N  CK  + ++A     + + + IR  P +  YN 
Sbjct: 238 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDVYNA 292

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ G  + G L +   + + M     VP+  T+   +DGLCK+G V EA    +++ +  
Sbjct: 293 LMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 352

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           C   + +YN +I+GL K  + K A ++  ++   G  PD VT +T++   CKE + D A 
Sbjct: 353 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 412

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            +L +M      P  VT+ TL+ G  Q N+      L+H+M     VVS  +  + ++D 
Sbjct: 413 GILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDR 472

Query: 585 LSKDKKYRECLNQFRHL 601
           L K+   ++ L    H+
Sbjct: 473 LCKEGCLKQALLLMDHM 489



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 180/572 (31%), Positives = 290/572 (50%), Gaps = 47/572 (8%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++A      M+    +P   +F  ++  L K  +++   SL   +      P     N 
Sbjct: 26  TDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNT 85

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+ LCK      A  ++   + S F P+ VT++ L +GLC  GRI EA  L K+++   
Sbjct: 86  LISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNG 145

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C PN+VT+NTLI+GLC+   T  A +L E +V+  G +  PDVVTY  I+DGLCK+G +D
Sbjct: 146 CTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS-GFV--PDVVTYTIIVDGLCKEGRLD 202

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-------------- 287
           KA +++  M  R   P+VITY +L+ G C      EA  +F EM+               
Sbjct: 203 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 262

Query: 288 ----------------NGVQ--PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
                           +G++  P +  +NA+++  CK+G++D++  + E M  RG  P+ 
Sbjct: 263 NGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 322

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN +MDG C  G++  A     SM S GC  DV SYNI+I+   K  K ++A  +  +
Sbjct: 323 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 382

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M+   I P  +TYNTL++   +     DA+ ++  M    V PD+ T+ T I GL +   
Sbjct: 383 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 442

Query: 450 VLEAVQVFQAIRNCKCELRI-ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
           + +A ++   +    C +    TYN +I+ LCK G LK A  L   +   G   + VT +
Sbjct: 443 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 502

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
             I  LCKEG++D+A+ LL +M+    +  EV++ T++ G  +  +  +      K+A E
Sbjct: 503 IFIDRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRA----SKLARE 555

Query: 569 KLVVSDLSLSSK----VVDLLSKDKKYRECLN 596
            + V  L ++S     ++D  +K K+  E L 
Sbjct: 556 MVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 587



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 162/490 (33%), Positives = 263/490 (53%), Gaps = 13/490 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +++IL   L K  + D    L K ++ NG  P+L   N LI+ LCK   T  A+ +
Sbjct: 113 PDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYEL 172

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  ++ S F P+ VT+  +++GLC EGR+ +A ++ + +    C P+V+T+  L+ GLCR
Sbjct: 173 LETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR 232

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           T     A  +F+EMV++    C  D + Y S+++G CK     +A++++  ++     P 
Sbjct: 233 TGRVDEAHHIFKEMVSKD---CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPY 286

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           +  YN+L+ G+C      E   +F +M   G  P++ T+N +++  CK GK+D+    LE
Sbjct: 287 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLE 346

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M   G  PD V+YN ++DG     +   AR++   M+  G   D  +YN L+   CK++
Sbjct: 347 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 406

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND-VVPDSFTF 437
           + +DAV + + M+   + P  +TYNTL+SGL Q   LGDA +L+ +M  N  VV    T+
Sbjct: 407 RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 466

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T ID LCK G + +A+ +   +     E    TYN  I+ LCK GRL  A  L   +  
Sbjct: 467 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD- 525

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN--CVPSEVTFCTLLRGFVQNNKK 555
              + D V+ +T+I  LCK  Q+D+A+ L  +M A    C+ S  TF  L+  F +  + 
Sbjct: 526 --TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH-TFNLLIDAFTKTKRL 582

Query: 556 SKVVVLLHKM 565
            + + LL  M
Sbjct: 583 DEALTLLELM 592



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 261/557 (46%), Gaps = 69/557 (12%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + ++  L+  L K  + +    L + L S+G  PD+    ++++ LCK G    A  
Sbjct: 147 TPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALK 206

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           ++  +L+   TP+ +T+  L+ GLC  GR+ EA  +FK++    C  + + + +L+NG C
Sbjct: 207 MVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYC 266

Query: 198 RTRNTLVALKL-------------------------FEEMVNEFGAI----CKPDVVTYN 228
           ++  T  A K+                          +E+ N F  +    C P++ TYN
Sbjct: 267 KSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYN 326

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            ++DGLCK G VD+A   L  M      P+V++YN +I G       KEA+ +  +M+  
Sbjct: 327 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 386

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G+ PD VT+N ++   CK+ + D    +L+ MI+ GV+PD VTYN+L+ G     R+  A
Sbjct: 387 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDA 446

Query: 349 RELFVSMVSKGCRHDV-YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
            EL   M+  GC      +YN +I+  CK+  ++ A+ L   M    +  + +TYN  + 
Sbjct: 447 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID 506

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK-----------------NGFV 450
            L + G L +A  L+ +M   D + D  ++ T I GLCK                  G  
Sbjct: 507 RLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLC 563

Query: 451 L-------------------EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           +                   EA+ + + +    C   + TYN +I  LCK+ ++  A +L
Sbjct: 564 ITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWEL 623

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F  +  +G +   V+ + +I+ LC +G+  +A  +L +M + +C   ++    L      
Sbjct: 624 FDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRG 683

Query: 552 NNKKSKVVVLLHKMAAE 568
             +  +   LL +M  +
Sbjct: 684 QGRGEEAAELLRRMTTK 700



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 242/535 (45%), Gaps = 77/535 (14%)

Query: 33  KTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLA 92
           +T +SS    D  +    ++   K G +  ++A+   + M+K   +P + ++T L+  L 
Sbjct: 174 ETLVSSGFVPDVVTYTIIVDGLCKEGRL--DKALKMVEGMLKRGCTPSVITYTALMEGLC 231

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           +  + D    +FK + S     D      L+N  CK   T  A  V+  I     TP   
Sbjct: 232 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYID 288

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            +N L++G C EGR+ E   +F+ +    C PN+ T+N +++GLC+      A    E M
Sbjct: 289 VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 348

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                A C PDVV+YN IIDGL K     +A+++L QM    I P+ +TYN+L+  FC  
Sbjct: 349 ---HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKE 405

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMIN------------------------------ 302
           + + +A  +   M+  GV PD VT+N +I+                              
Sbjct: 406 ERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTT 465

Query: 303 YN------CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM- 355
           YN      CK+G + +   L++ M   GV  +TVTYN  +D  C  GR+  A  L   M 
Sbjct: 466 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 525

Query: 356 -----------------------VSKGCRHDV---------YSYNILINANCKDQKVEDA 383
                                   SK  R  V         +++N+LI+A  K +++++A
Sbjct: 526 TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 585

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + L   M+     PSVITYN +++ L ++  +  A +L D+M +  +V  S ++   I G
Sbjct: 586 LTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 645

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           LC  G   EA+QV + + +  CE+       L   L   GR + A +L  R+  K
Sbjct: 646 LCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 169/490 (34%), Positives = 270/490 (55%), Gaps = 41/490 (8%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           +I  N+A+  F  M+K +P P +  F  LL+ + K K+YD V+SL K++   G+  DL+ 
Sbjct: 63  DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY- 121

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
                                             TFN +IN  C   ++  A  +  K+ 
Sbjct: 122 ----------------------------------TFNIVINCFCCCFQVSLALSILGKML 147

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +P+ VT  +L+NG CR      A+ L ++MV E G   KPD+V YN+IID LCK  
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-EIGY--KPDIVAYNAIIDSLCKTK 204

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V+ A +   +++ + I PNV+TY +L+ G C    W +A  L  +M+   + P+V+T++
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+++   K+GK+ +   L E M++  ++PD VTY+SL++G CL  RI  A ++F  MVSK
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  DV SYN LIN  CK ++VED + L+REM    +  + +TYNTL+ G FQ G++  A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            +   +M    + PD +T+   + GLC NG + +A+ +F+ ++  + +L I TY  +I G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           +CK G+++ A  LF  L  KG  PD+VT +TM+  LC +G + +   L   M+ +  + +
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504

Query: 539 EVTFCTLLRG 548
           +   CTL  G
Sbjct: 505 D---CTLSDG 511



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 227/436 (52%), Gaps = 3/436 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ V FN L++ +    +      L KK+ V     ++ TFN +IN  C      +AL +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M+ + G   +PD VT  S+++G C+   V  A  L+ +M +    P+++ YN++I  
Sbjct: 143 LGKML-KLGY--EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C      +A   F E+   G++P+VVT+ A++N  C   +     RLL  MI++ + P+
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +TY++L+D F   G++  A+ELF  MV      D+ +Y+ LIN  C   ++++A  ++ 
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+S+     V++YNTL++G  +   + D +KL  +M    +V ++ T+ T I G  + G
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            V +A + F  +        I TYN L+ GLC  G L+ A  +F  +Q +    D+VT +
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I  +CK G++++A  L   +  K   P  VT+ T++ G        +V  L  KM  E
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499

Query: 569 KLVVSDLSLSSKVVDL 584
            L+ +D +LS   + L
Sbjct: 500 GLMKNDCTLSDGDITL 515



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 200/394 (50%), Gaps = 4/394 (1%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A+ LF +MV        P +V +N ++  + K    D    L  +M+   I  ++ T+N 
Sbjct: 69  AIDLFSDMVKSRPF---PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           +I  FCC      A  +  +M+  G +PD VT  +++N  C+  ++     L++ M++ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD V YN+++D  C   R++ A + F  +  KG R +V +Y  L+N  C   +  DA 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L  +M+ ++I P+VITY+ LL    + G + +A +L ++M    + PD  T+++ I+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C +  + EA Q+F  + +  C   + +YN LING CK  R++   KLF  +  +G + + 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           VT +T+I    + G +DKA +    M+     P   T+  LL G   N +  K +V+   
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           M   ++ + D+   + V+  + K  K  E  + F
Sbjct: 426 MQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLF 458



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 139/296 (46%), Gaps = 1/296 (0%)

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           +D K++    L   M++    P  V +N L+     + +      L   M   G R+D+Y
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           ++NI+IN  C   +V  A+ +  +ML     P  +T  +L++G  +   + DA+ L+DKM
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
                 PD   +   ID LCK   V +A   F+ I        + TY  L+NGLC   R 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +L   +  K   P+V+T S ++    K G++ +A +L  +M   +  P  VT+ +L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + G   +++  +   +   M + K  ++D+   + +++   K K+  + +  FR +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVS-KGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 185/579 (31%), Positives = 299/579 (51%), Gaps = 50/579 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ FFD M++ +P         ++ +  +  + D  +SL++++    +  +++  N+L
Sbjct: 88  DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA----------AR 172
           I C C     S +    G++ +  F P+ VTFN L++GLC E RI EA            
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGS 207

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAIC---- 220
           LF ++      P V+TFNTLINGLC     L A  L  +MV +        +G I     
Sbjct: 208 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 267

Query: 221 --------------------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
                               KPDVV Y++IID LCKDG    A+ L  +M ++ I PNV 
Sbjct: 268 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 327

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TYN +I GFC    W +A+ L  +M++  + PDV+TFNA+I+ + K+GK+ +  +L + M
Sbjct: 328 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 387

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           + R + PDTVTYNS++ GFC   R   A+ +F  M S     DV ++N +I+  C+ ++V
Sbjct: 388 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRV 443

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++ + L RE+    +  +  TYNTL+ G  +V NL  A  L  +M  + V PD+ T    
Sbjct: 444 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 503

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           + G C+N  + EA+++F+ I+  K +L    YN +I+G+CK  ++  A  LF  L   G 
Sbjct: 504 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 563

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            PDV T + MI   C +  +  AN L   M+     P   T+ TL+RG ++  +  K + 
Sbjct: 564 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 623

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
           L+ +M +        ++   V DL++    DK + + L+
Sbjct: 624 LISEMRSNGFSGDAFTI-KMVADLITDGRLDKSFSDMLS 661



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 206/400 (51%), Gaps = 9/400 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    +N   K G+  S  A+     M +    P +  ++ ++  L K+  +     
Sbjct: 255 DVVTYGTIVNGMCKMGDTKS--ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 312

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF  +   G+ P++F  N +I+  C  G  S A  +L  ++     P+ +TFN LI+   
Sbjct: 313 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 372

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            EG++ EA +L  ++      P+ VT+N++I G C+          F++  + F  +  P
Sbjct: 373 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR-------FDDAKHMFDLMASP 425

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           DVVT+N+IID  C+   VD+  +LL ++  R +  N  TYN+LI GFC VD+   A+ LF
Sbjct: 426 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 485

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM+ +GV PD +T N ++   C++ K+++   L E++    ++ DTV YN ++ G C  
Sbjct: 486 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 545

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            ++  A +LF S+   G   DV +YN++I+  C    + DA  L+ +M      P   TY
Sbjct: 546 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 605

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           NTL+ G  + G +  +++LI +M+ N    D+FT     D
Sbjct: 606 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 645



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 171/349 (48%), Gaps = 15/349 (4%)

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N +I  F  ++    A  L+ +M    +  ++ +FN +I   C   K+         + +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD----------VYSYNILIN 372
            G  PD VT+N+L+ G CL  RIS A  LF  MV  G   D          V ++N LIN
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLIN 229

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             C + +V +A  L  +M+ + +   V+TY T+++G+ ++G+   AL L+ KM+   + P
Sbjct: 230 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D   ++  ID LCK+G   +A  +F  +        + TYNC+I+G C  GR   A +L 
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +  +   PDV+T + +I    KEG++ +A  L  +M  +   P  VT+ +++ GF ++
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 409

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           N+      +   MA+  +V  +      ++D+  + K+  E +   R +
Sbjct: 410 NRFDDAKHMFDLMASPDVVTFN-----TIIDVYCRAKRVDEGMQLLREI 453


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 169/490 (34%), Positives = 270/490 (55%), Gaps = 41/490 (8%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           +I  N+A+  F  M+K +P P +  F  LL+ + K K+YD V+SL K++   G+  DL+ 
Sbjct: 63  DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY- 121

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
                                             TFN +IN  C   ++  A  +  K+ 
Sbjct: 122 ----------------------------------TFNIVINCFCCCFQVSLALSILGKML 147

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +P+ VT  +L+NG CR      A+ L ++MV E G   KPD+V YN+IID LCK  
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-EIGY--KPDIVAYNAIIDSLCKTK 204

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V+ A +   +++ + I PNV+TY +L+ G C    W +A  L  +M+   + P+V+T++
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+++   K+GK+ +   L E M++  ++PD VTY+SL++G CL  RI  A ++F  MVSK
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK 324

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  DV SYN LIN  CK ++VED + L+REM    +  + +TYNTL+ G FQ G++  A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            +   +M    + PD +T+   + GLC NG + +A+ +F+ ++  + +L I TY  +I G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           +CK G+++ A  LF  L  KG  PD+VT +TM+  LC +G + +   L   M+ +  + +
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504

Query: 539 EVTFCTLLRG 548
           +   CTL  G
Sbjct: 505 D---CTLSDG 511



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 227/436 (52%), Gaps = 3/436 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ V FN L++ +    +      L KK+ V     ++ TFN +IN  C      +AL +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M+ + G   +PD VT  S+++G C+   V  A  L+ +M +    P+++ YN++I  
Sbjct: 143 LGKML-KLGY--EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C      +A   F E+   G++P+VVT+ A++N  C   +     RLL  MI++ + P+
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +TY++L+D F   G++  A+ELF  MV      D+ +Y+ L+N  C   ++++A  ++ 
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFD 319

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+S+     V++YNTL++G  +   + D +KL  +M    +V ++ T+ T I G  + G
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            V +A + F  +        I TYN L+ GLC  G L+ A  +F  +Q +    D+VT +
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I  +CK G++++A  L   +  K   P  VT+ T++ G        +V  L  KM  E
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499

Query: 569 KLVVSDLSLSSKVVDL 584
            L+ +D +LS   + L
Sbjct: 500 GLMKNDCTLSDGDITL 515



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 200/394 (50%), Gaps = 4/394 (1%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A+ LF +MV        P +V +N ++  + K    D    L  +M+   I  ++ T+N 
Sbjct: 69  AIDLFSDMVKSRPF---PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           +I  FCC      A  +  +M+  G +PD VT  +++N  C+  ++     L++ M++ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD V YN+++D  C   R++ A + F  +  KG R +V +Y  L+N  C   +  DA 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L  +M+ ++I P+VITY+ LL    + G + +A +L ++M    + PD  T+++ ++GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C +  + EA Q+F  + +  C   + +YN LING CK  R++   KLF  +  +G + + 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           VT +T+I    + G +DKA +    M+     P   T+  LL G   N +  K +V+   
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           M   ++ + D+   + V+  + K  K  E  + F
Sbjct: 426 MQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLF 458



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 139/296 (46%), Gaps = 1/296 (0%)

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           +D K++    L   M++    P  V +N L+     + +      L   M   G R+D+Y
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           ++NI+IN  C   +V  A+ +  +ML     P  +T  +L++G  +   + DA+ L+DKM
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
                 PD   +   ID LCK   V +A   F+ I        + TY  L+NGLC   R 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +L   +  K   P+V+T S ++    K G++ +A +L  +M   +  P  VT+ +L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + G   +++  +   +   M + K  ++D+   + +++   K K+  + +  FR +
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVS-KGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 180/560 (32%), Positives = 309/560 (55%), Gaps = 14/560 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  ++   L    KSG I   E  + F   + +K    +++F I ++ L +  +     +
Sbjct: 15  DAYTVGILLRSLLKSGKI---EKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQT 71

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +  +G +P+    N L++ LC  G  S A  +  R++++ ++P+ VT+N L++G C
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G++ EA ++F         P+VVT+N LING C+      A ++ + MV+E      P
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES---LVP 188

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC-VDDWKEAKCL 281
           DVVTYNS+++GLCK+G VD+A+ L++   D+  +PNVITY++LI G C  +   + A+ L
Sbjct: 189 DVVTYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRRLESARQL 245

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             +M+ NG +PD+V++NA+I+   ++  + +  +L   ++++G  P+  TYN L+DG   
Sbjct: 246 LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLK 305

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             R++ A ELF  +V  G   D  +Y + I+  CK  +VEDA+ + ++M  +   P V++
Sbjct: 306 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 365

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +N +++GL +   + +A  L+  M+     P++ +F T I G C+ G   +A+  F+ + 
Sbjct: 366 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 425

Query: 462 NCKCELRIETYNCLINGLCKM---GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
               +  + TYN L++GLCK    GR+K A  LF  +  KG +PDVVT S +I  L K G
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 485

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
           ++D A  LL  MEAK C+P+  T+ +L+ G    +K  + + L   M  EK  V D    
Sbjct: 486 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAM-VEKGCVPDTITY 544

Query: 579 SKVVDLLSKDKKYRECLNQF 598
             ++  L K +   + L  F
Sbjct: 545 GTIISALCKQEMVDKALALF 564



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 174/511 (34%), Positives = 273/511 (53%), Gaps = 12/511 (2%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
            G ++  +A+Y  + MIK   SP + ++  LL    K  + D  + +F      G  PD+
Sbjct: 98  GGRMSDAQALY--ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDV 155

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              N LIN  CK      A  +L R++     P+ VT+N L+NGLC  GR+ EA  L   
Sbjct: 156 VTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD 215

Query: 177 LNVFACDPNVVTFNTLINGLCRT-RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
                  PNV+T++TLI+GLCR  R    A +L E+MV      CKPD+V+YN++I GL 
Sbjct: 216 KGF---SPNVITYSTLISGLCRELRRLESARQLLEKMVLNG---CKPDIVSYNALIHGLA 269

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           ++  V +A +L   +  +   P V TYN LI G    D   EA  LF  ++ +G++PD +
Sbjct: 270 REQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI 329

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+   I+  CK G+++    +L+ M ++G  PD V++N++++G C   R+  A  L   M
Sbjct: 330 TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM 389

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL---FQV 412
            +KGC  +  S+N LI   C+  K + A+  ++EML   ++P+V+TYN L+ GL    Q 
Sbjct: 390 EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE 449

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G + +A+ L D M     VPD  T++  IDGL K G + +A ++  A+    C   + TY
Sbjct: 450 GRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTY 509

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI+GLC + ++  A +LF  +  KG +PD +T  T+I  LCK+  +DKA  L      
Sbjct: 510 NSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLE 569

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
              VP+   + +L+ G     +  + + LL 
Sbjct: 570 AGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 152/421 (36%), Positives = 237/421 (56%), Gaps = 10/421 (2%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-CDPNVVTFNTLINGLCRTRNTLVA 205
           ++P+  T   L+  L   G+I +A R  ++L V   CD  + TFN  I+GLCR      A
Sbjct: 12  YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCD--ISTFNIYISGLCRASRIGDA 69

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
             +F+ M  + G    P+ +TYN+++ GLC  G +  A+ L  +M     +P+V+TYN+L
Sbjct: 70  QTVFDGM-RKHGFW--PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTL 126

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + GFC V    EA  +F   +  G  PDVVT+NA+IN  CK  K+D+  R+L+ M+   +
Sbjct: 127 LHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESL 186

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD-QKVEDAV 384
            PD VTYNSL++G C  GR+  AR L   +V KG   +V +Y+ LI+  C++ +++E A 
Sbjct: 187 VPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESAR 243

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L  +M+    +P +++YN L+ GL +   + +ALKL   +      P+  T+   IDGL
Sbjct: 244 QLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGL 303

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K   V EA ++F  +     E    TY   I+GLCK GR++ A  +   +  KG +PDV
Sbjct: 304 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 363

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           V+ + +I+ LCKE ++D+A  LL  MEAK C P+ ++F TL+ G  +  K  K +    +
Sbjct: 364 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 423

Query: 565 M 565
           M
Sbjct: 424 M 424



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 213/417 (51%), Gaps = 35/417 (8%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           I  PD  T   ++  L K G ++KA   + Q+  + +  ++ T+N  I G C      +A
Sbjct: 11  IYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDA 69

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           + +F  M  +G  P+ +T+NA+++  C  G+M     L E MI+ G +PD VTYN+L+ G
Sbjct: 70  QTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHG 129

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           FC VG++  A ++F   V +G   DV +YN LIN  CK  K+++A  + + M+SE + P 
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189

Query: 399 VITYNTLLSGLFQVG---------------------------------NLGDALKLIDKM 425
           V+TYN+L++GL + G                                  L  A +L++KM
Sbjct: 190 VVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
            LN   PD  ++   I GL +   V EA+++F ++     E  + TYN LI+GL K  R+
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +LF  L   G  PD +T +  I  LCK G+++ A  +L DM+ K CVP  V+   +
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           + G  +  +  +  VLL  M A+    + +S ++ +     +  K+++ +  F+ +L
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG-QCRAGKWKKAMTTFKEML 425


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 166/512 (32%), Positives = 280/512 (54%), Gaps = 7/512 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M+     P + ++  L+  L K ++      LF+   + G  P +   N +
Sbjct: 12  DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 71

Query: 123 INCLCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I+ LCK G    A  +   + +   F P  VT++ LI+GLC +  + +  +L +++    
Sbjct: 72  IDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRG 131

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C PN VT+NTL+N L     +  A  L E+M       C P+++T+  II GLCK+G ++
Sbjct: 132 CAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANG---CPPELITFGLIIKGLCKEGEIE 188

Query: 242 KAKELLLQM--KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
            A  ++ +M   +  ++P+VIT+NS++ G C      +A  +F   ++ G +P+VVT++ 
Sbjct: 189 AAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 248

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+   K  KMD+  +LL  M++ G   +TVTY++++DG   VGR+  A  +   M   G
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 308

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  D  +YN LI+   K Q++ +AV L REML     PSV+TY TL  GL + G   +A+
Sbjct: 309 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 368

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNCLING 478
           +++D M      P++ T+++ +DGLCK G V EA+  F+ + R+      +  Y+ LI+G
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 428

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LCK G++  A +   R+   G IPDVVT S +I+ LC  G++D   +L   M  + CVP 
Sbjct: 429 LCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPD 488

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            VT+ TL+    + ++  +   L  +M ++ L
Sbjct: 489 MVTYATLVDRLCRASRVDEAFDLFQQMRSDGL 520



 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 164/518 (31%), Positives = 273/518 (52%), Gaps = 41/518 (7%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+ LCK      A  +  +++     P+ VT+  LI+GL  + R+ EA  LF++     
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P VVT+NT+I+GLC+      AL L+++M   FG   +P VVTY+++IDGLC+D  VD
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFG--FRPTVVTYSTLIDGLCRDHEVD 118

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           K  +LL +M  R   PN +TYN+L+         KEA  L  +M  NG  P+++TF  +I
Sbjct: 119 KGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLII 178

Query: 302 NYNCKDGKMDKVNRLLE--LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
              CK+G+++   R+++   MI+ G++PD +T+NS++DG C   RI  A  +F   + +G
Sbjct: 179 KGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           CR +V +Y+ LI+   K  K+++A+ L  +M+    R + +TY+T++ GL +VG + DA+
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 298

Query: 420 KLIDKMQLNDVVPDSFTFATYID-----------------------------------GL 444
            ++ +M+    +PD+ T+ T ID                                   GL
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI-PD 503
           C++G   EAV++   +    C     TY+ +++GLCK GR+  A   F ++     + P 
Sbjct: 359 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 418

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           V+  S +I  LCK G++D+A + L  M     +P  VTF  L+ G     +    + L  
Sbjct: 419 VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFR 478

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            M AE+  V D+   + +VD L +  +  E  + F+ +
Sbjct: 479 GM-AERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQM 515



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 247/462 (53%), Gaps = 7/462 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  N    + D  I     P + +++ L+  L ++ + D    L + +   G  P+
Sbjct: 77  KCGRI-ENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPN 135

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N L+N L   G +  AF +L ++  +   P  +TF  +I GLC EG I  A R+  
Sbjct: 136 AVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVD 195

Query: 176 KLNVF--ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           ++ +      P+V+TFN++++GLC+ +  L A  +F+  + E G  C+P+VVTY+++IDG
Sbjct: 196 EMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL-ERG--CRPNVVTYSTLIDG 252

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           L K   +D+A +LL +M +     N +TY++++ G   V   ++A  +  +M D G  PD
Sbjct: 253 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 312

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            VT+N +I+   K  ++ +   LL  M++ G +P  VTY +L  G C  GR   A E+  
Sbjct: 313 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 372

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML-SERIRPSVITYNTLLSGLFQV 412
            M ++GC  +  +Y+ +++  CK  +V +A+  + +M   E + P VI Y+ L+ GL + 
Sbjct: 373 YMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA 432

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G + +A + +++M     +PD  TF+  I+GLC  G +   +++F+ +    C   + TY
Sbjct: 433 GKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTY 492

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
             L++ LC+  R+  A  LF +++  G  PD  T  TMIH L
Sbjct: 493 ATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 141/417 (33%), Positives = 230/417 (55%), Gaps = 6/417 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P   ++  L+  L    +     SL +++ +NG  P+L    L+I  LCK G    AF 
Sbjct: 133 APNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFR 192

Query: 138 VLGRI--LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
           V+  +  + S  +P+ +TFN +++GLC E RI++A  +FK+     C PNVVT++TLI+G
Sbjct: 193 VVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 252

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           L +      AL+L  +MV E G  C+ + VTY++++DGL K G ++ A  +L QM+D   
Sbjct: 253 LSKMAKMDEALQLLAKMV-ELG--CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGC 309

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P+ +TYN+LI GF      +EA  L  EM++ G  P VVT+  + +  C+ G+ D+   
Sbjct: 310 LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVE 369

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGCRHDVYSYNILINAN 374
           +L+ M  RG  P+ +TY+S++DG C  GR++ A   F  M   +     V +Y+ LI+  
Sbjct: 370 ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGL 429

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK  K+++A      M+     P V+T++ L++GL   G +   L+L   M     VPD 
Sbjct: 430 CKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDM 489

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            T+AT +D LC+   V EA  +FQ +R+        T   +I+GL ++ R + A ++
Sbjct: 490 VTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 159/433 (36%), Positives = 253/433 (58%), Gaps = 3/433 (0%)

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           +IL++ + P+T+T    I G C +G+I +A     K+       + V++ TLINGLC+  
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            T  AL+L     N+ G + +PDVV YN+IIDG+CKD  V+ A +L  +   + I P+V 
Sbjct: 313 ETKAALELLRR--ND-GKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVF 369

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TYN+LI GFC V   K+A  LF +M    + PDV TF+ +++  CKDG + +   +L +M
Sbjct: 370 TYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMM 429

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           +++ + PD VTY+SLMDG+CLV  +++A  +F +M  +G   +V SYNI+IN  CK + V
Sbjct: 430 MKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMV 489

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A+ L++EM  ++I P VITY++L+ GL + G +  AL+L+D+M      PD  T+ + 
Sbjct: 490 DEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSI 549

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           +D LCK   V +A+ +   ++       + TY  L+ GLC+ G+L+ A K+F  L  KG 
Sbjct: 550 LDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGY 609

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
             DV   + MI   C +G  D+A  LL  ME   C+P   T+  ++    + ++      
Sbjct: 610 NLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEK 669

Query: 561 LLHKMAAEKLVVS 573
           LL +M    L+V+
Sbjct: 670 LLREMIMRGLLVA 682



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 272/576 (47%), Gaps = 51/576 (8%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +N+AV  F  +++  P+P    F  +L  L K+K Y TV+SL +++   G+  +    N+
Sbjct: 91  NNDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNI 150

Query: 122 LINCLCKMGITSGAFVVLGR------ILRSCFTPNT------------VTFNF------- 156
           LIN  C++G+   AF VL R      IL+ CF                + ++F       
Sbjct: 151 LINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKD 210

Query: 157 -----LINGLCAEGRIMEAARLFKK----LNVF--------------ACDPNVVTFNTLI 193
                L N L +   ++E  + F K    L  F                +P+ +T  T I
Sbjct: 211 FLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFI 270

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
            G C       AL  F + V   G     D V+Y ++I+GLCK G    A ELL +   +
Sbjct: 271 KGFCLKGQIHQALH-FHDKVIAMGF--HLDQVSYGTLINGLCKVGETKAALELLRRNDGK 327

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            + P+V+ YN++I G C      +A  L+ E +   + PDV T+NA+I+  C  GK+   
Sbjct: 328 LVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDA 387

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L   M  + + PD  T++ L+DGFC  G I  A+ +   M+ +  + DV +Y+ L++ 
Sbjct: 388 IDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDG 447

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C   +V  A  ++  M    +  +V +YN +++G  ++  + +A+KL  +M    + PD
Sbjct: 448 YCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPD 507

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+++ IDGLCK+G +  A+++   +     +  I TYN +++ LCK   +  A  L  
Sbjct: 508 VITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLT 567

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           +L+ +G  PD+ T + ++  LC+ G+++ A  +  D+  K        +  +++GF    
Sbjct: 568 KLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKG 627

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
              + + LL KM     +    +    ++ L  KD+
Sbjct: 628 LFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDE 663



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 212/414 (51%), Gaps = 5/414 (1%)

Query: 31  NPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTM 90
            P   L + +  D  ++  F+      G I  ++A++F D +I M       S+  L+  
Sbjct: 250 TPPKILKNGYEPDTITLTTFIKGFCLKGQI--HQALHFHDKVIAMGFHLDQVSYGTLING 307

Query: 91  LAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
           L K  +    + L +R +   + PD+ + N +I+ +CK    + AF +    +     P+
Sbjct: 308 LCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPD 367

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
             T+N LI+G C  G++ +A  LF K+      P+V TF+ L++G C+  N   A  +  
Sbjct: 368 VFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLA 427

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
            M+ +     KPDVVTY+S++DG C    V+KA+ +   M  R +  NV +YN +I GFC
Sbjct: 428 MMMKQ---SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFC 484

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            +    EA  LF EM    + PDV+T++++I+  CK G++     L++ M  RG  PD +
Sbjct: 485 KIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDII 544

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TYNS++D  C    + +A  L   +  +G R D+ +Y IL+   C+  K+EDA  ++ ++
Sbjct: 545 TYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDL 604

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
           L +     V  Y  ++ G    G   +AL L+ KM+ N  +PD+ T+   I  L
Sbjct: 605 LVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL 658



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 177/348 (50%), Gaps = 3/348 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P +  +  ++  + K+K  +    L+    S  +FPD+F  N LI+  C +G    A  
Sbjct: 330 QPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAID 389

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  ++      P+  TF+ L++G C +G I EA  +   +   +  P+VVT+++L++G C
Sbjct: 390 LFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYC 449

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                  A  +F  M +        +V +YN +I+G CK   VD+A +L  +M  + I P
Sbjct: 450 LVNEVNKAESIFNTMSHRG---VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFP 506

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +VITY+SLI G C       A  L  EM   G QPD++T+N++++  CK   +DK   LL
Sbjct: 507 DVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLL 566

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             +  +G+ PD  TY  L+ G C  G++  AR++F  ++ KG   DVY+Y ++I   C  
Sbjct: 567 TKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDK 626

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
              ++A+ L  +M      P   TY  ++  LF+      A KL+ +M
Sbjct: 627 GLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 172/329 (52%), Gaps = 3/329 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   +   +  +  P + ++  L++      +    + LF ++ S  + PD++  ++L
Sbjct: 350 NDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSIL 409

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK G    A  VL  +++    P+ VT++ L++G C    + +A  +F  ++    
Sbjct: 410 VDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGV 469

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             NV ++N +ING C+ +    A+KLF+EM ++      PDV+TY+S+IDGLCK G +  
Sbjct: 470 TANVQSYNIMINGFCKIKMVDEAMKLFKEMHHK---QIFPDVITYSSLIDGLCKSGRISY 526

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL+ +M  R   P++ITYNS++   C      +A  L  ++   G++PD+ T+  ++ 
Sbjct: 527 ALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVK 586

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ GK++   ++ E ++ +G N D   Y  ++ GFC  G    A  L   M   GC  
Sbjct: 587 GLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIP 646

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREML 391
           D  +Y I+I +  +  + + A  L REM+
Sbjct: 647 DAKTYEIIILSLFEKDENDMAEKLLREMI 675



 Score = 38.9 bits (89), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 48/265 (18%), Positives = 97/265 (36%), Gaps = 49/265 (18%)

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           DAV L+  +L +   P  I +  +L  L +  +    L L  KM+   +  +       I
Sbjct: 93  DAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILI 152

Query: 442 DGLCKNGFVLEAVQVF-------QAIRNC------------------------------- 463
           +  C+ G +  A  V        + +++C                               
Sbjct: 153 NSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFL 212

Query: 464 ---------KCELRIETYNCLINGLCKMGRLKTACKLFH-RLQHKGPIPDVVTCSTMIHW 513
                      ++ IE +   I   C +   + + +    ++   G  PD +T +T I  
Sbjct: 213 QSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKG 272

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
            C +GQ+ +A      + A      +V++ TL+ G  +  +    + LL +    KLV  
Sbjct: 273 FCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDG-KLVQP 331

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQF 598
           D+ + + ++D + KDK   +  + +
Sbjct: 332 DVVMYNTIIDGMCKDKHVNDAFDLY 356


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 183/492 (37%), Positives = 278/492 (56%), Gaps = 5/492 (1%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF-PDLFVL 119
           T N+ V  F  ++   P P +  F  LL+ L K K+Y+ VVSL+  L S     P L   
Sbjct: 49  TFNDTVSSFHHILHHHPPPPIQHFNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITF 108

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           ++LIN   ++G    AF +LG IL+  F  +      L+ GLC +GR++EA  L  +   
Sbjct: 109 SILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVD 168

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
                + V + T+INGLC+   T  A+++F +M         P+++ YN++IDGLCK G 
Sbjct: 169 RGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKK---IRVYPNLIMYNTVIDGLCKQGL 225

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFN 298
           VD+A  L  +M +  I  +V +YNS+I GFC V  ++ A  L  EM+  G V PDV TFN
Sbjct: 226 VDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFN 285

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I+  CK G++ +   ++ +MI+RG  PD V+YN+LM+G+CL G +  A+++F  MV +
Sbjct: 286 ILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVER 345

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
               +V SY  LIN  CK + V++A+ L  EM ++ + P  +TYN LL GL + G     
Sbjct: 346 TALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYE 405

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L++ M+ +    D  T+   +D   K+    +A+ +FQ I        I TYN L++G
Sbjct: 406 WDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDG 465

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LCK GRLK A ++F  L  KG  P++ T + MIH LCKEG +D+A  LL  M   N +P+
Sbjct: 466 LCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPN 525

Query: 539 EVTFCTLLRGFV 550
            +TF T++R  +
Sbjct: 526 YITFDTIVRAIL 537



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 1/231 (0%)

Query: 367 YNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +N L++   K ++    V LY  + S+  I+PS+IT++ L++   Q+G +G A  L+  +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
                  D     T + GLC  G VLEAV +     +         Y  +INGLCK+G+ 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A ++F +++     P+++  +T+I  LCK+G +D+A  L  +M          ++ ++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           + GF    +    V LL +M     V  D+   + ++D L K  +  E  N
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYN 302


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 182/532 (34%), Positives = 285/532 (53%), Gaps = 26/532 (4%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           SF IL+       +    +S F +L   G  PD+   N L++ LC     S A  + G +
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202

Query: 143 LRSCF---------------TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           + + F               TP  +TFN LINGLC EGR++EAA L  K+       +VV
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+ T++NG+C+  +T  AL L  +M        KPDVV Y++IID LCKDG    A+ L 
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETH---IKPDVVIYSAIIDRLCKDGHHSDAQYLF 319

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M ++ I PNV TYN +I GFC    W +A+ L  +M++  + PDV+TFNA+I+ + K+
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           GK+ +  +L + M+ R + PDTVTYNS++ GFC   R   A+ +F  M S     DV ++
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTF 435

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N +I+  C+ ++V++ + L RE+    +  +  TYNTL+ G  +V NL  A  L  +M  
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + V PD+ T    + G C+N  + EA+++F+ I+  K +L    YN +I+G+CK  ++  
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  LF  L   G  PDV T + MI   C +  +  AN L   M+     P   T+ TL+R
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
           G ++  +  K + L+ +M +        ++   V DL++    DK + + L+
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKSFSDMLS 666



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 250/465 (53%), Gaps = 9/465 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV  FD M+++  +P + +F  L+  L    +     +L  ++   GL  D+     ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N +CKMG T  A  +L ++  +   P+ V ++ +I+ LC +G   +A  LF ++      
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNV T+N +I+G C       A +L  +M+        PDV+T+N++I    K+G + +A
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE---INPDVLTFNALISASVKEGKLFEA 385

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           ++L  +M  R I P+ +TYNS+I GFC  + + +AK +F    D    PDVVTFN +I+ 
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDV 441

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+  ++D+  +LL  + +RG+  +T TYN+L+ GFC V  ++ A++LF  M+S G   D
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             + NIL+   C+++K+E+A+ L+  +   +I    + YN ++ G+ +   + +A  L  
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            + ++ V PD  T+   I G C    + +A  +F  +++   E    TYN LI G  K G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA-NDLL 527
            +  + +L   ++  G   D  T   M+  L  +G++DK+ +D+L
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSFSDML 665



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 168/552 (30%), Positives = 256/552 (46%), Gaps = 90/552 (16%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ FFD M++ +P           T +  NK    V+ +F R+N     PD+      
Sbjct: 88  DDAIDFFDYMVRSRP---------FYTAVDCNK----VIGVFVRMNR----PDV-----A 125

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   KM I         RI       N  +FN LI   C   ++  +   F KL     
Sbjct: 126 ISLYRKMEIR--------RI-----PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF 172

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVN--------------EFGAICKPDVVTYN 228
            P+VVTFNTL++GLC       AL LF  MV               E G    P V+T+N
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIG--LTPVVITFN 230

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++I+GLC +G V +A  L+ +M  + ++ +V+TY +++ G C + D K A  L  +M + 
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
            ++PDVV ++A+I+  CKDG       L   M+++G+ P+  TYN ++DGFC  GR S A
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           + L   M+ +    DV ++N LI+A+ K+ K+ +A  L  EML   I P  +TYN+++ G
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             +     DA  + D M      PD  TF T ID  C+   V E +Q+ + I        
Sbjct: 411 FCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM------------------ 510
             TYN LI+G C++  L  A  LF  +   G  PD +TC+ +                  
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526

Query: 511 -----------------IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
                            IH +CK  ++D+A DL   +      P   T+  ++ GF   +
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586

Query: 554 KKSKVVVLLHKM 565
             S   VL HKM
Sbjct: 587 AISDANVLFHKM 598



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 206/400 (51%), Gaps = 9/400 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    +N   K G+  S  A+     M +    P +  ++ ++  L K+  +     
Sbjct: 260 DVVTYGTIVNGMCKMGDTKS--ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF  +   G+ P++F  N +I+  C  G  S A  +L  ++     P+ +TFN LI+   
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            EG++ EA +L  ++      P+ VT+N++I G C+          F++  + F  +  P
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR-------FDDAKHMFDLMASP 430

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           DVVT+N+IID  C+   VD+  +LL ++  R +  N  TYN+LI GFC VD+   A+ LF
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM+ +GV PD +T N ++   C++ K+++   L E++    ++ DTV YN ++ G C  
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            ++  A +LF S+   G   DV +YN++I+  C    + DA  L+ +M      P   TY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           NTL+ G  + G +  +++LI +M+ N    D+FT     D
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 20/354 (5%)

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N +I  F  ++    A  L+ +M    +  ++ +FN +I   C   K+         + +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV---------------YSY 367
            G  PD VT+N+L+ G CL  RIS A  LF  MV  G    V                ++
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N LIN  C + +V +A  L  +M+ + +   V+TY T+++G+ ++G+   AL L+ KM+ 
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + PD   ++  ID LCK+G   +A  +F  +        + TYNC+I+G C  GR   
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A +L   +  +   PDV+T + +I    KEG++ +A  L  +M  +   P  VT+ +++ 
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           GF ++N+      +   MA+  +V  +      ++D+  + K+  E +   R +
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTFN-----TIIDVYCRAKRVDEGMQLLREI 458


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 176/500 (35%), Positives = 272/500 (54%), Gaps = 22/500 (4%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           SF IL+       +    +S F +L   G  PD+   N L++ LC     S A  + G +
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202

Query: 143 LRSCF---------------TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           + + F               TP  +TFN LINGLC EGR++EAA L  K+       +VV
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+ T++NG+C+  +T  AL L  +M        KPDVV Y++IID LCKDG    A+ L 
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETH---IKPDVVIYSAIIDRLCKDGHHSDAQYLF 319

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M ++ I PNV TYN +I GFC    W +A+ L  +M++  + PDV+TFNA+I+ + K+
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           GK+ +  +L + M+ R + PDTVTYNS++ GFC   R   A+ +F  M S     DV ++
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTF 435

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N +I+  C+ ++V++ + L RE+    +  +  TYNTL+ G  +V NL  A  L  +M  
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + V PD+ T    + G C+N  + EA+++F+ I+  K +L    YN +I+G+CK  ++  
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  LF  L   G  PDV T + MI   C +  +  AN L   M+     P   T+ TL+R
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615

Query: 548 GFVQNNKKSKVVVLLHKMAA 567
           G ++  +  K + L+ +M +
Sbjct: 616 GCLKAGEIDKSIELISEMRS 635



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 166/552 (30%), Positives = 254/552 (46%), Gaps = 90/552 (16%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ FFD M++ +P           T +  NK    V+ +F R+N     PD+      
Sbjct: 88  DDAIDFFDYMVRSRP---------FYTAVDCNK----VIGVFVRMNR----PDV-----A 125

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   KM I                  N  +FN LI   C   ++  +   F KL     
Sbjct: 126 ISLYRKMEIRR-------------IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF 172

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVN--------------EFGAICKPDVVTYN 228
            P+VVTFNTL++GLC       AL LF  MV               E G    P V+T+N
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIG--LTPVVITFN 230

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++I+GLC +G V +A  L+ +M  + ++ +V+TY +++ G C + D K A  L  +M + 
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
            ++PDVV ++A+I+  CKDG       L   M+++G+ P+  TYN ++DGFC  GR S A
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           + L   M+ +    DV ++N LI+A+ K+ K+ +A  L  EML   I P  +TYN+++ G
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             +     DA  + D M      PD  TF T ID  C+   V E +Q+ + I        
Sbjct: 411 FCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM------------------ 510
             TYN LI+G C++  L  A  LF  +   G  PD +TC+ +                  
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526

Query: 511 -----------------IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
                            IH +CK  ++D+A DL   +      P   T+  ++ GF   +
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586

Query: 554 KKSKVVVLLHKM 565
             S   VL HKM
Sbjct: 587 AISDANVLFHKM 598



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 239/453 (52%), Gaps = 7/453 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV  FD M+++  +P + +F  L+  L    +     +L  ++   GL  D+     ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N +CKMG T  A  +L ++  +   P+ V ++ +I+ LC +G   +A  LF ++      
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNV T+N +I+G C       A +L  +M+        PDV+T+N++I    K+G + +A
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER---EINPDVLTFNALISASVKEGKLFEA 385

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           ++L  +M  R I P+ +TYNS+I GFC  + + +AK +F    D    PDVVTFN +I+ 
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDV 441

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+  ++D+  +LL  + +RG+  +T TYN+L+ GFC V  ++ A++LF  M+S G   D
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             + NIL+   C+++K+E+A+ L+  +   +I    + YN ++ G+ +   + +A  L  
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            + ++ V PD  T+   I G C    + +A  +F  +++   E    TYN LI G  K G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
            +  + +L   ++  G   D  T       +C+
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 209/404 (51%), Gaps = 9/404 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    +N   K G+  S  A+     M +    P +  ++ ++  L K+  +     
Sbjct: 260 DVVTYGTIVNGMCKMGDTKS--ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF  +   G+ P++F  N +I+  C  G  S A  +L  ++     P+ +TFN LI+   
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            EG++ EA +L  ++      P+ VT+N++I G C+          F++  + F  +  P
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR-------FDDAKHMFDLMASP 430

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           DVVT+N+IID  C+   VD+  +LL ++  R +  N  TYN+LI GFC VD+   A+ LF
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM+ +GV PD +T N ++   C++ K+++   L E++    ++ DTV YN ++ G C  
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            ++  A +LF S+   G   DV +YN++I+  C    + DA  L+ +M      P   TY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           NTL+ G  + G +  +++LI +M+ N    D+FT     + +C+
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 164/339 (48%), Gaps = 20/339 (5%)

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  L+ +M    +  ++ +FN +I   C   K+         + + G  PD VT+N+L+ 
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDV---------------YSYNILINANCKDQKVED 382
           G CL  RIS A  LF  MV  G    V                ++N LIN  C + +V +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L  +M+ + +   V+TY T+++G+ ++G+   AL L+ KM+   + PD   ++  ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
            LCK+G   +A  +F  +        + TYNC+I+G C  GR   A +L   +  +   P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           DV+T + +I    KEG++ +A  L  +M  +   P  VT+ +++ GF ++N+      + 
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424

Query: 563 HKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             MA+  +V  +      ++D+  + K+  E +   R +
Sbjct: 425 DLMASPDVVTFN-----TIIDVYCRAKRVDEGMQLLREI 458



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 146/324 (45%), Gaps = 13/324 (4%)

Query: 23  WCSFGRPPNPKT---DLSSHHFK-DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS 78
           +CSFGR  + +    D+       D  +    ++   K G +   EA    D M+     
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF--EAEKLCDEMLHRCIF 398

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  ++    K+ ++D    +F  + S    PD+   N +I+  C+         +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQL 454

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  I R     NT T+N LI+G C    +  A  LF+++      P+ +T N L+ G C 
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 AL+LFE  V +   I   D V YN II G+CK   VD+A +L   +    + P+
Sbjct: 515 NEKLEEALELFE--VIQMSKI-DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TYN +I GFC      +A  LF +M DNG +PD  T+N +I    K G++DK   L+ 
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLV 342
            M   G + D  T     +  C V
Sbjct: 632 EMRSNGFSGDAFTIKMAEEIICRV 655



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 11/213 (5%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           T++  L+    +    +    LF+ + S+G+ PD    N+L+   C+      A  +   
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           I  S    +TV +N +I+G+C   ++ EA  LF  L +   +P+V T+N +I+G C    
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A  LF +M +      +PD  TYN++I G  K G +DK+ EL+ +M+    + +  T
Sbjct: 588 ISDANVLFHKMKDNGH---EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
                   C V D         E+++N ++P +
Sbjct: 645 IKMAEEIICRVSDE--------EIIENYLRPKI 669



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 32/152 (21%), Positives = 62/152 (40%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+  F+ +   K      ++ I++  + K  + D    LF  L  +G+ PD+   N++
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C     S A V+  ++  +   P+  T+N LI G    G I ++  L  ++     
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
             +  T       +CR  +  +        +N
Sbjct: 639 SGDAFTIKMAEEIICRVSDEEIIENYLRPKIN 670


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 188/493 (38%), Positives = 281/493 (56%), Gaps = 5/493 (1%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF-PDLFVL 119
           T ++AV  F  M+ + P P + S   LL+ + K K Y TVVSL   L+S G   P L  L
Sbjct: 35  TFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTL 94

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           ++ IN L  +G    AF V+ +I++  F  +  T   L+ GLC +GR  EA  L+     
Sbjct: 95  SIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVS 154

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
                + V + TLINGLC+   T  A++L  +M  E G + +P+++ YN ++DGLCK+G 
Sbjct: 155 KGFSFDEVCYGTLINGLCKMGKTRDAIELLRKM--EKGGV-RPNLIMYNMVVDGLCKEGL 211

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM-MDNGVQPDVVTFN 298
           V +A  L  +M  + I  +V TYNSLI GFC    ++ A  L  EM M   V+PDV TFN
Sbjct: 212 VTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFN 271

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +++  CK G + +   +  LMI+RG+ PD V+ N+LM+G+CL G +S A+E+F  MV +
Sbjct: 272 ILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVER 331

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   +V SY+ LIN  CK + V++A+ L  EM    + P  +TYN LL GL + G +   
Sbjct: 332 GKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYE 391

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L++ M+ +   PD  T+   +D   K   + +A+ +FQ I +      I TYN LI+G
Sbjct: 392 WDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDG 451

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LCK GR+K A ++F  L  KG  P++ T + MI+ L +EG +D+A  LLL+M      P+
Sbjct: 452 LCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPN 511

Query: 539 EVTFCTLLRGFVQ 551
            VTF  L+R  ++
Sbjct: 512 AVTFDPLVRALLE 524



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 199/413 (48%), Gaps = 15/413 (3%)

Query: 200 RNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           R TL     F++ V+ F  +      P +V+ N ++  + K         L   +  +  
Sbjct: 27  RKTLPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGT 86

Query: 256 -NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             P+++T +  I     +     A  +  +++  G   D  T   ++   C  G+  +  
Sbjct: 87  PKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEAL 146

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L +  + +G + D V Y +L++G C +G+   A EL   M   G R ++  YN++++  
Sbjct: 147 NLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGL 206

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL-NDVVPD 433
           CK+  V +A  L  EM+ + I   V TYN+L+ G    G    A++L+++M +  DV PD
Sbjct: 207 CKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPD 266

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            +TF   +D LCK G V EA  VF  +     E  + + N L+NG C  G +  A ++F 
Sbjct: 267 VYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFD 326

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           R+  +G +P+V++ ST+I+  CK   +D+A  LL +M  +N VP  VT+  LL G  ++ 
Sbjct: 327 RMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSG 386

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ----FRHLL 602
           +     VL      E +  S  +      ++L  D   RECL++    F+H++
Sbjct: 387 R-----VLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIV 434


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 173/463 (37%), Positives = 265/463 (57%), Gaps = 7/463 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+ ++ +  +  F  +L  L K K Y TV+SL K+++  G+  +L  L++LINC C +G 
Sbjct: 1   MLLVRHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQ 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + +F +LG+IL+  + PNT+T+  L+ GLC +G + +      K+   A   N V++ T
Sbjct: 61  MAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGT 120

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+NGLC+T  T  A+KL   M+ +     +P+VV Y++IIDGLCKD  V++A +L  +M 
Sbjct: 121 LLNGLCKTGETRCAIKLL-RMIEDRST--RPNVVMYSAIIDGLCKDKLVNEAYDLYSEMD 177

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R I PNVITYN+LIC FC       A  L  EM+   + PDV TF+ +I+  CK+GK  
Sbjct: 178 AREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNA 237

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K  ++   M+Q GVNP+  +YN +++G C   R+  A  L   M+ K    D  +YN LI
Sbjct: 238 K--QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 295

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPS-VITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +  CK  ++  A+ L  EM   R +P+ V+TY +LL  L +  NL  A  L  KM+   +
Sbjct: 296 DGLCKSGRITSALNLMNEM-HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 354

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            P  +T+   IDGLCK G +  A ++FQ +    C + + TY  +I+GLCK G    A  
Sbjct: 355 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALA 414

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
           +  +++  G IP+ VT   +I  L ++ + DKA  LL +M AK
Sbjct: 415 IKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 457



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 232/459 (50%), Gaps = 40/459 (8%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           T   + FN ++  L      +    L K+++V   + N+VT + LIN  C       +  
Sbjct: 7   TSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFS 66

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L  +++ + G    P+ +T+ +++ GLC  G V K      ++  +    N ++Y +L+ 
Sbjct: 67  LLGKIL-KLGY--XPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLN 123

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C   + + A  L   + D   +P+VV ++A+I+  CKD  +++   L   M  R + P
Sbjct: 124 GLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFP 183

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + +TYN+L+  FCL G++  A  L   M+ K    DVY+++ILI+A CK+ K  +A  ++
Sbjct: 184 NVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIF 241

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             M+   + P+V +YN +++GL +   + +A+ L+ +M   ++VPD+ T+ + IDGLCK+
Sbjct: 242 HAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKS 301

Query: 448 GFVLEAVQ-----------------------------------VFQAIRNCKCELRIETY 472
           G +  A+                                    +F  ++    +  + TY
Sbjct: 302 GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 361

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
             LI+GLCK GRLK A +LF  L  KG   DV T + MI  LCKEG  D+A  +   ME 
Sbjct: 362 TALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMED 421

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             C+P+ VTF  ++R   + ++  K   LLH+M A+ L+
Sbjct: 422 NGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 191/360 (53%), Gaps = 5/360 (1%)

Query: 66  VYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           ++F D ++         S+  LL  L K  +    + L + +      P++ + + +I+ 
Sbjct: 100 LHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDG 159

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           LCK  + + A+ +   +      PN +T+N LI   C  G++M A  L  ++ +   +P+
Sbjct: 160 LCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPD 219

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           V TF+ LI+ LC+      A ++F  MV + G    P+V +YN +I+GLCK   VD+A  
Sbjct: 220 VYTFSILIDALCKEGKN--AKQIFHAMV-QMGV--NPNVYSYNIMINGLCKCKRVDEAMN 274

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           LL +M  +N+ P+ +TYNSLI G C       A  L  EM   G   DVVT+ ++++  C
Sbjct: 275 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC 334

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           K+  +DK   L   M +RG+ P   TY +L+DG C  GR+  A+ELF  ++ KGC  DV+
Sbjct: 335 KNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVW 394

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y ++I+  CK+   ++A+ +  +M      P+ +T+  ++  LF+      A KL+ +M
Sbjct: 395 TYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 191/379 (50%), Gaps = 3/379 (0%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           ++ +N I+  L K  +      L  QM  + I  N++T + LI  FC +     +  L  
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +++  G  P+ +T+  ++   C  G++ K+    + ++ +    + V+Y +L++G C  G
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
               A +L   +  +  R +V  Y+ +I+  CKD+ V +A  LY EM +  I P+VITYN
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL+      G L  A  L+ +M L ++ PD +TF+  ID LCK G    A Q+F A+   
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQM 247

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                + +YN +INGLCK  R+  A  L   + HK  +PD VT +++I  LCK G++  A
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 307

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            +L+ +M  +      VT+ +LL    +N    K   L  KM  E+ +   +   + ++D
Sbjct: 308 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM-KERGIQPTMYTYTALID 366

Query: 584 LLSKDKKYRECLNQFRHLL 602
            L K  + +     F+HLL
Sbjct: 367 GLCKGGRLKNAQELFQHLL 385



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 149/297 (50%), Gaps = 5/297 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   +  M   +  P + ++  L+       Q     SL   +    + PD++  ++L
Sbjct: 167 NEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSIL 226

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G    A  +   +++    PN  ++N +INGLC   R+ EA  L +++     
Sbjct: 227 IDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNM 284

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ VT+N+LI+GLC++     AL L  EM +        DVVTY S++D LCK+  +DK
Sbjct: 285 VPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQP---ADVVTYTSLLDALCKNQNLDK 341

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L ++MK+R I P + TY +LI G C     K A+ LF  ++  G   DV T+  MI+
Sbjct: 342 ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMIS 401

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             CK+G  D+   +   M   G  P+ VT+  ++          +A +L   M++KG
Sbjct: 402 GLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 3/226 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A   F  M++M  +P + S+ I++  L K K+ D  ++L + +    + PD    N LI+
Sbjct: 237 AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLID 296

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK G  + A  ++  +       + VT+  L++ LC    + +A  LF K+      P
Sbjct: 297 GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 356

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
            + T+  LI+GLC+      A +LF+ ++ +    C  DV TY  +I GLCK+G  D+A 
Sbjct: 357 TMYTYTALIDGLCKGGRLKNAQELFQHLLVKG---CCIDVWTYTVMISGLCKEGMFDEAL 413

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
            +  +M+D    PN +T+  +I      D+  +A+ L  EM+  G+
Sbjct: 414 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 6/158 (3%)

Query: 24  CSFGRPPNPKTDLSSHHFK----DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           C  GR  +    ++  H +    D  +    L+   K+ N+  ++A   F  M +    P
Sbjct: 299 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNL--DKATALFMKMKERGIQP 356

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
            M ++T L+  L K  +      LF+ L   G   D++   ++I+ LCK G+   A  + 
Sbjct: 357 TMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIK 416

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
            ++  +   PN VTF  +I  L  +    +A +L  ++
Sbjct: 417 SKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 194/570 (34%), Positives = 300/570 (52%), Gaps = 43/570 (7%)

Query: 37  SSHHFKDGTSIAKFLNDRH--KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKN 94
           S     D  +  + LN     +S +   + +V FF  M+ + P P +  F +L  ++AK+
Sbjct: 30  SPPSISDAAARTRLLNSIRTLQSADAAVSVSVDFFHRMLTLNPFPCIQDFNLLFGIVAKS 89

Query: 95  KQYDTVVSLFKRLNSNGL-FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVT 153
           + + T +SL K L+S G    D+  LN+LINCLC++  T+  F VLG + +    P  VT
Sbjct: 90  QHFATAISLIKTLHSLGYEIADVCTLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVT 149

Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
            N + NGLC                             ++NGLC+  +T  AL+  ++MV
Sbjct: 150 LNTIANGLC-----------------------------IVNGLCKIGDTSGALESLKKMV 180

Query: 214 NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC-V 272
                  +P+VV YN+I+DGLCK G V +A  L  +M   N+ PNV+TYN LI G C  V
Sbjct: 181 KRN---LEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEV 237

Query: 273 DDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
             W+E   LF EM+ + G+ PDV TF+ ++N  CK+G + +   ++  MI+ GV  + VT
Sbjct: 238 GGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVT 297

Query: 332 YNSLMDGFCLVGRISRARELFVSMV--SKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           YNSL+ G+CL  R+  A  +F  MV   +GC   V +YN LI+  CK +KV  A+ L  E
Sbjct: 298 YNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSE 357

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M+ + + P V T+ +L+ G F+VG    A +L   M+    VP   T A  +DGL K   
Sbjct: 358 MVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWL 417

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
             EA+ +F+A+     +L I  YN +++G+CKMG+L  A KL   +  KG   D  T + 
Sbjct: 418 DSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNI 477

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           MI  LC+EG +D A +LL  M+   C P++ ++   ++G ++    S+    L  M  + 
Sbjct: 478 MIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKG 537

Query: 570 LVVSDLSLSSKVVDLLS---KDKKYRECLN 596
             V D + +  ++  LS   +D  ++E L 
Sbjct: 538 FPV-DATTAELLIRFLSANEEDNAFQEFLQ 566


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 169/505 (33%), Positives = 275/505 (54%), Gaps = 5/505 (0%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    +N   KS  +  ++A+   + M+    +P + S+  +L    K  + +  + 
Sbjct: 43  DSVTYNTMINGLSKSDRL--DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALW 100

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L +++   G  PD+     +IN LCK+     A  V+ ++++    PN +T+  L++G C
Sbjct: 101 LLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC 160

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G +  A  L +K+      PN +T+N +++GLC  R    AL+LF+EM  E    C P
Sbjct: 161 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEM--EESGSCPP 218

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           DV TY++I+D L K G VD A  L+  M  +  +PNV+TY+SL+ G C      EA  L 
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 278

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M  +G  P++VT+N +I+ +CK G++D+   LLE M+  G  P+ VTY  L+D FC  
Sbjct: 279 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 338

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G+   A  L   MV KG   ++++YN L++  CK  +VE A  L   M+ +   P+V++Y
Sbjct: 339 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 398

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           NT+++GL +   + + + L+++M  N+ VPD  TF T ID +CK   V  A ++F  I+ 
Sbjct: 399 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 458

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK-GPIPDVVTCSTMIHWLCKEGQMD 521
             C   + TYN L++GLCK  R   A  L   +  K G  PD++T +T+I  LCK  ++D
Sbjct: 459 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 518

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLL 546
           +A  L L M +    P +VT+  ++
Sbjct: 519 RAYKLFLQMLSDGLAPDDVTYSIVI 543



 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 153/490 (31%), Positives = 267/490 (54%), Gaps = 4/490 (0%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD    N +IN L K      A  +L  ++ + F PN  ++N +++G C   R+  A  L
Sbjct: 42  PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            +++ +  C P+VV++ T+INGLC+      A ++ ++M+      C+P+V+TY +++DG
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG---CQPNVITYGTLVDG 158

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV-QP 292
            C+ G +D A EL+ +M +R   PN ITYN+++ G C       A  LF EM ++G   P
Sbjct: 159 FCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPP 218

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           DV T++ +++   K GK+D   RL+E M+ +G +P+ VTY+SL+ G C  G++  A  L 
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 278

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M   GC  ++ +YN +I+ +CK  ++++A  L  EM+    +P+V+TY  LL    + 
Sbjct: 279 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 338

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G   DA+ L++ M     VP+ FT+ + +D  CK   V  A Q+  ++    C   + +Y
Sbjct: 339 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 398

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N +I GLCK  ++     L  ++     +PD+VT +T+I  +CK  ++D A +L   ++ 
Sbjct: 399 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 458

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
             C P+ VT+ +L+ G  ++ +  +   LL +M  ++    D+   + V+D L K K+  
Sbjct: 459 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 518

Query: 593 ECLNQFRHLL 602
                F  +L
Sbjct: 519 RAYKLFLQML 528



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 163/504 (32%), Positives = 268/504 (53%), Gaps = 4/504 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +++ ++  L K+ + D    L + + S G  P++   + L++ LCK G    A  +
Sbjct: 218 PDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 277

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L R+ RS  +PN VT+N +I+G C  GRI EA  L +++    C PNVVT+  L++  C+
Sbjct: 278 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 337

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+ L E MV E G +  P++ TYNS++D  CK   V++A +LL  M  +   PN
Sbjct: 338 CGKAEDAIGLVEVMV-EKGYV--PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 394

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V++YN++I G C      E   L  +M+ N   PD+VTFN +I+  CK  ++D    L  
Sbjct: 395 VVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN 454

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-GCRHDVYSYNILINANCKD 377
           L+ + G  P+ VTYNSL+ G C   R  +A  L   M  K GC  D+ +YN +I+  CK 
Sbjct: 455 LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKS 514

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           ++V+ A  L+ +MLS+ + P  +TY+ ++S L +   + +A  +++ M  N   P + T+
Sbjct: 515 KRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITY 574

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T IDG CK G + +A+++ Q + +      + T++  I+ L K GRL+ A +L   +  
Sbjct: 575 GTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR 634

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G +PD VT +T++   C   + + A DL   M    C P   T+ TL+   V       
Sbjct: 635 AGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKD 694

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKV 581
           ++  + K   +     +  LSSK+
Sbjct: 695 LLAEVSKSMVDTGFKLNHELSSKL 718



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 128/383 (33%), Positives = 216/383 (56%), Gaps = 4/383 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA +  + M+     P + ++T+LL    K  + +  + L + +   G  P+LF  N L
Sbjct: 307 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSL 366

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK      A  +L  +++    PN V++N +I GLC   ++ E   L +++    C
Sbjct: 367 LDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNC 426

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++VTFNT+I+ +C+T    +A +LF  ++ E G  C P++VTYNS++ GLCK    D+
Sbjct: 427 VPDIVTFNTIIDAMCKTYRVDIAYELFN-LIQESG--CTPNLVTYNSLVHGLCKSRRFDQ 483

Query: 243 AKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           A+ LL +M + +  +P++ITYN++I G C       A  LF++M+ +G+ PD VT++ +I
Sbjct: 484 AEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVI 543

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK   MD+ N +LELM++ G +P  +TY +L+DGFC  G + +A E+   ++SKG  
Sbjct: 544 SSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSY 603

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            DV +++I I+   K  ++  A  L   ML   + P  +TYNTLL G        DA+ L
Sbjct: 604 PDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDL 663

Query: 422 IDKMQLNDVVPDSFTFATYIDGL 444
            + M+     PD+ T+ T +  L
Sbjct: 664 FEVMRQCGCEPDNATYTTLVGHL 686



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 229/433 (52%), Gaps = 41/433 (9%)

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           +++ GLC       A+  F EM       C PD VTYN++I+GL K   +D A  LL +M
Sbjct: 15  SILRGLCDAGQCSDAVLHFREM----SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 70

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
            D    PNV +YN+++ GFC  +  + A  L  +M+  G  PDVV++  +IN  CK  ++
Sbjct: 71  VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG----------- 359
           D+  R+++ MIQRG  P+ +TY +L+DGFC VG +  A EL   M  +G           
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190

Query: 360 -------------------------CRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
                                    C  DV++Y+ ++++  K  KV+DA  L   M+S+ 
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
             P+V+TY++LL GL + G L +A  L+ +M  +   P+  T+ T IDG CK G + EA 
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            + + + +  C+  + TY  L++  CK G+ + A  L   +  KG +P++ T ++++   
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           CK+ ++++A  LL  M  K CVP+ V++ T++ G  +  K  + V+LL +M +    V D
Sbjct: 371 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN-CVPD 429

Query: 575 LSLSSKVVDLLSK 587
           +   + ++D + K
Sbjct: 430 IVTFNTIIDAMCK 442



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 189/367 (51%), Gaps = 2/367 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A+   + M++    P + ++  LL M  K  + +    L   +   G  P++   N 
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 400

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I  LCK        ++L ++L +   P+ VTFN +I+ +C   R+  A  LF  +    
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 460

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C PN+VT+N+L++GLC++R    A  L  EM  + G  C PD++TYN++IDGLCK   VD
Sbjct: 461 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG--CSPDIITYNTVIDGLCKSKRVD 518

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A +L LQM    + P+ +TY+ +I   C      EA  +   M+ NG  P  +T+  +I
Sbjct: 519 RAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 578

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK G +DK   +L+L++ +G  PD VT++  +D     GR+ +A EL  +M+  G  
Sbjct: 579 DGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLV 638

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YN L+   C   + EDAV L+  M      P   TY TL+  L    +  D L  
Sbjct: 639 PDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAE 698

Query: 422 IDKMQLN 428
           + K  ++
Sbjct: 699 VSKSMVD 705


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 174/491 (35%), Positives = 273/491 (55%), Gaps = 42/491 (8%)

Query: 52  NDRHKSGNITSNEAVYFFDCMIKMK-PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           ND H   N+ S+     F+ ++  K P+P +  F  +L  L K   Y T +SL +++   
Sbjct: 38  NDEH---NLVSS-----FNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELK 89

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  +L  LN+LINC  ++G    +F V   IL+  + PN +T   LI GLC +      
Sbjct: 90  GIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK------ 143

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
                           V++ TLINGLC+      AL+L   +    G + +P+VV YN+I
Sbjct: 144 ----------------VSYGTLINGLCKVGQARAALQLLRRVD---GKLVQPNVVMYNTI 184

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ID +CK   V++A +L  +M    I+P+V+TY++LI GF  V   K+A  LF +M+   +
Sbjct: 185 IDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENI 244

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
           +PDV TFN +++  CKDGKM +   +  +M+++G+ P+ VTY SLMDG+CLV ++++A  
Sbjct: 245 KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANS 304

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +F +M   G   D  SYNI+IN  CK +KV++A+ L+++M  + I P+V+TY +L+ GL 
Sbjct: 305 IFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLC 364

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV--------QVFQAIRN 462
           + G +  ALKL+D+M    V PD  T+++ +D LCKN  V +A+        QVF+ +  
Sbjct: 365 KSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFV 424

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
               L +  Y  +I G C  G    A  L  +++  G IPD  T   +I  L K+ + D 
Sbjct: 425 KGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDM 484

Query: 523 ANDLLLDMEAK 533
           A  LL +M A+
Sbjct: 485 AEKLLREMIAR 495



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 189/374 (50%), Gaps = 23/374 (6%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P +  +  I+  L K      A  L  QM+ + I  N++T N LI  F  +     +  +
Sbjct: 58  PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           F  ++  G  P+V+T   +I   C                        V+Y +L++G C 
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLCL----------------------KVSYGTLINGLCK 155

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           VG+   A +L   +  K  + +V  YN +I++ CK + V +A  LY EM+SE I P V+T
Sbjct: 156 VGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVT 215

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+ L+SG F VG L DA+ L +KM L ++ PD +TF   +DG CK+G + E   VF  + 
Sbjct: 216 YSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMM 275

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +  + TY  L++G C + ++  A  +F+ +   G  PD  + + MI+  CK  ++D
Sbjct: 276 KQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVD 335

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A +L   M  KN +P+ VT+ +L+ G  ++ K S  + L+ +M  ++ V  D+   S +
Sbjct: 336 EAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEM-HDRGVPPDIITYSSI 394

Query: 582 VDLLSKDKKYRECL 595
           +D L K+ +  + +
Sbjct: 395 LDALCKNHQVDKAI 408



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 143/270 (52%), Gaps = 11/270 (4%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  F+ MI     P + +F IL+    K+ +     ++F  +   G+ P++     L+
Sbjct: 231 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 290

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C +   + A  +   + +    P+T ++N +ING C   ++ EA  LFKK++     
Sbjct: 291 DGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNII 350

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNVVT+ +LI+GLC++     ALKL +EM ++ G    PD++TY+SI+D LCK+  VDKA
Sbjct: 351 PNVVTYTSLIDGLCKSGKISYALKLVDEM-HDRGV--PPDIITYSSILDALCKNHQVDKA 407

Query: 244 KELLLQMKD--------RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
             LL ++KD        +  N +V  Y  +I GFC    + EA  L  +M DNG  PD  
Sbjct: 408 IALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAK 467

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           T+  +I    K  + D   +LL  MI RG+
Sbjct: 468 TYEIIILSLFKKDENDMAEKLLREMIARGL 497


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 164/519 (31%), Positives = 280/519 (53%), Gaps = 4/519 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  MI     P   ++T L+       ++  VV + + ++++GL PD  +  +L++ LCK
Sbjct: 225 FQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCK 284

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G  + A  +   ++R    P+   +  L++G   EG + E       +      P+   
Sbjct: 285 NGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHI 344

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FN + N   +      A+ +F++M  ++     P VV Y ++ID LCK G VD A     
Sbjct: 345 FNIMFNAYAKKAMIDEAMHIFDKMRQQW---LSPGVVNYGALIDALCKLGRVDDAVLKFN 401

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           QM +  + P++  ++SL+ G C VD W++A+ LF E++D G++ +   FN ++   C++G
Sbjct: 402 QMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREG 461

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ +  RL++LM++  V PD ++YN+L+DG CL GRI  A +L   MVS G + D ++YN
Sbjct: 462 RVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYN 521

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L++  CK ++++DA  L+REML + + P V+TYNT+L GLFQ+G   +A +L   M  N
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINN 581

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
               D +T+   ++GLC+N FV EA ++FQ++ +   +L I T N +I  L K GR + A
Sbjct: 582 RRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDA 641

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             LF  +   G +PDV T   +   L KEG +++ ++L   ME     P+      L+R 
Sbjct: 642 MDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            +      +  V L K+  EK    + S +S ++ + S+
Sbjct: 702 LLHRGDIGRAGVYLSKL-DEKNFSLEASTTSMLISIYSR 739



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 162/549 (29%), Positives = 270/549 (49%), Gaps = 43/549 (7%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK---QYDTVVS 102
            + + +  R +SG++  ++A+  FD M+       + +F  LLT++++ +     + VVS
Sbjct: 16  ELERVIAGRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVS 75

Query: 103 LFKRLN---SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT-PNTVTFNFLI 158
           LF R+    S  + P      +LI C C+MG     F   G IL++ ++  NTV F  L+
Sbjct: 76  LFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLL 135

Query: 159 NGLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
            GLC   R+ EA   L +++  F C  NV+++N L+ GLC  +    AL+L   M ++  
Sbjct: 136 KGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGD 195

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
               P+VVTY ++IDGLCK   VD+AK +   M D+ + PN  TY  LI G+     WKE
Sbjct: 196 GSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKE 255

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
              +  EM  +G+QPD V +  +++Y CK+G+  +   + + +I++G+ P    Y  L+ 
Sbjct: 256 VVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLH 315

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G+   G +S        MV  G   D + +NI+ NA  K   +++A+ ++ +M  + + P
Sbjct: 316 GYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSP 375

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG-------------- 443
            V+ Y  L+  L ++G + DA+   ++M    V PD F F++ + G              
Sbjct: 376 GVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLF 435

Query: 444 ---------------------LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
                                LC+ G V+EA ++   +        + +YN L++G C  
Sbjct: 436 FEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLT 495

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GR+  A KL   +   G  PD  T +T++H  CK  ++D A  L  +M  K   P  VT+
Sbjct: 496 GRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTY 555

Query: 543 CTLLRGFVQ 551
            T+L G  Q
Sbjct: 556 NTILHGLFQ 564



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 174/398 (43%), Gaps = 18/398 (4%)

Query: 205 ALKLFEEMVNEFGAICKP-DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN------- 256
           ALKLF+EM+       +P  V T+N ++  + +      A EL++ + +R I        
Sbjct: 35  ALKLFDEMLT----YARPASVRTFNRLLTVVSR-ARCSSASELVVSLFNRMIRECSVKVA 89

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ-PDVVTFNAMINYNCKDGKMDKVNR 315
           P+  TY  LI  FC +   K     F  ++  G    + V F  ++   C   ++D+   
Sbjct: 90  PSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATD 149

Query: 316 -LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-CRH--DVYSYNILI 371
            LL  M + G   + ++YN L+ G C   R   A EL   M   G   H  +V +Y  +I
Sbjct: 150 ILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVI 209

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CK Q V+ A  +++ M+ + +RP+  TY  L+ G    G   + ++++ +M  + + 
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQ 269

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD   +A  +D LCKNG   EA  +F ++     +  +  Y  L++G    G L      
Sbjct: 270 PDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSF 329

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              +   G  PD    + M +   K+  +D+A  +   M  +   P  V +  L+    +
Sbjct: 330 LDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCK 389

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
             +    V+  ++M  E +       SS V  L + DK
Sbjct: 390 LGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDK 427



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 7/275 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D M+++   P + S+  L+       + D    L   + S GL PD F  N L+
Sbjct: 465 EAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLL 524

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFA 181
           +  CK      A+ +   +L    TP  VT+N +++GL   GR  EA  L+  +  N   
Sbjct: 525 HGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRK 584

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           CD  + T+  ++NGLCR      A K+F+ + ++     + D+ T N +I  L K G  +
Sbjct: 585 CD--IYTYTIILNGLCRNNFVDEAFKMFQSLCSK---DLQLDIFTINIMIGALLKGGRKE 639

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A +L   +    + P+V TY  +          +E   LF  M +NG  P+    NA++
Sbjct: 640 DAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
            +    G + +    L  + ++  + +  T + L+
Sbjct: 700 RWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLI 734



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 94/219 (42%), Gaps = 3/219 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  M+    +PG+ ++  +L  L +  ++     L+  + +N    D++   ++
Sbjct: 534 DDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTII 593

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LC+      AF +   +       +  T N +I  L   GR  +A  LF  ++ +  
Sbjct: 594 LNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGL 653

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V T+  +   L +  +     +LF  M     A   P+    N+++  L   G + +
Sbjct: 654 VPDVETYRLIAENLIKEGSLEELDELFSAMEENGTA---PNSRMLNALVRWLLHRGDIGR 710

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           A   L ++ ++N +    T + LI  +   +  + AK L
Sbjct: 711 AGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSL 749


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  295 bits (755), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 165/521 (31%), Positives = 281/521 (53%), Gaps = 4/521 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  MI     P   ++T L+       ++  VV + + ++++GL PD ++  +L++ LCK
Sbjct: 225 FQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCK 284

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G  + A  +   ++R    PN   +  L++G   EG + E       +      P+   
Sbjct: 285 NGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHI 344

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FN +     +      A+ +F++M  +      P++VTY ++ID LCK G VD A     
Sbjct: 345 FNIMFCAYAKKAMIDEAMHIFDKMRQQR---LSPNIVTYGALIDALCKLGRVDDAVLKFN 401

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           QM D  + P++  ++SL+ G C VD W++A+ LF E++D G++ D V FN ++   C++G
Sbjct: 402 QMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREG 461

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ +  RL++LM++ GV PD ++YN+L+DG CL GRI  A +L   +VS G + D  +YN
Sbjct: 462 RVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYN 521

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L++  CK ++++DA  L+REML + + P V+TYNT+L GLFQ G   +A +L   M  +
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINS 581

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
               + +T+   I+GLCKN FV EA ++F ++ +   +L I T N +I  L K GR + A
Sbjct: 582 RTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDA 641

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             LF  +   G +PDV T   +   L KEG +++ ++L   ME     P+      L+R 
Sbjct: 642 MDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
            +     ++    L K+  EK    + S +S ++ + S+ +
Sbjct: 702 LLHRGDINRAGAYLSKL-DEKNFSLEASTTSMLISIYSRGE 741



 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 165/563 (29%), Positives = 278/563 (49%), Gaps = 43/563 (7%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK---QYDTVVS 102
            + + + DR  SG++  N+A+  FD M+       + +F  LLT +++ +     + VVS
Sbjct: 16  ELERVIADRAHSGSLGLNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVS 75

Query: 103 LFKRLN---SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN-TVTFNFLI 158
           LF R+    S  + P  F   +LI C C+MG     F   G IL++ +  N TV F+ L+
Sbjct: 76  LFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLL 135

Query: 159 NGLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
            GLC   R+ EA   L +++  F C P+V +++ L+ G C  +    AL+L   M ++  
Sbjct: 136 KGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGD 195

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
               P+VVTY ++IDGLCK   VD+AK +   M D+ + PN  TY  LI G+  +  WKE
Sbjct: 196 GSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKE 255

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
              +  EM  +G+QPD   +  +++Y CK+G+  +   + + +I++G+ P+   Y  L+ 
Sbjct: 256 VVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLH 315

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G+   G +S        MV  G   D + +NI+  A  K   +++A+ ++ +M  +R+ P
Sbjct: 316 GYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSP 375

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG-------------- 443
           +++TY  L+  L ++G + DA+   ++M    + PD F F++ + G              
Sbjct: 376 NIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELF 435

Query: 444 ---------------------LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
                                LC+ G V+EA ++   +        + +YN L++G C  
Sbjct: 436 FEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLT 495

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GR+  A KL   +   G  PD VT +T++H  CK  ++D A  L  +M  K   P  VT+
Sbjct: 496 GRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTY 555

Query: 543 CTLLRGFVQNNKKSKVVVLLHKM 565
            T+L G  Q  + S+   L   M
Sbjct: 556 NTILHGLFQTGRFSEAKELYLSM 578



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 179/398 (44%), Gaps = 18/398 (4%)

Query: 205 ALKLFEEMVNEFGAICKP-DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN------- 256
           ALKLF+EM+       +P  V  +N ++  + +      A EL++ + +R I        
Sbjct: 35  ALKLFDEMLTH----ARPASVRAFNQLLTAVSR-ARCSSASELVVSLFNRMIRECSIKVA 89

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP-DVVTFNAMINYNCKDGKMDKVNR 315
           P+  TY  LI  FC +   K     F  ++  G +  D V F+ ++   C   ++D+   
Sbjct: 90  PSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATD 149

Query: 316 -LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-CRH--DVYSYNILI 371
            LL  M + G  PD  +Y+ L+ GFC   R   A EL   M   G   H  +V +Y  +I
Sbjct: 150 ILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVI 209

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CK Q V+ A  +++ M+ + +RP+  TY  L+ G   +G   + ++++ +M  + + 
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQ 269

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD + +A  +D LCKNG   EA  +F ++     +  +  Y  L++G    G L      
Sbjct: 270 PDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSF 329

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              +   G  PD    + M     K+  +D+A  +   M  +   P+ VT+  L+    +
Sbjct: 330 LDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCK 389

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
             +    V+  ++M  E +       SS V  L + DK
Sbjct: 390 LGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDK 427



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 3/273 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D M+++   P + S+  L+       + D    L   + S GL PD    N L+
Sbjct: 465 EAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLL 524

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK      A+ +   +L    TP+ VT+N +++GL   GR  EA  L+  +      
Sbjct: 525 HGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 584

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            N+ T+N +INGLC+      A K+F  + ++     + D+ T N +I  L K G  + A
Sbjct: 585 MNIYTYNIIINGLCKNNFVDEAFKMFHSLCSK---DLQLDIFTANIMIGALLKGGRKEDA 641

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L   +    + P+V TY  +          +E   LF  M +NG  P+    NA++ +
Sbjct: 642 MDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
               G +++    L  + ++  + +  T + L+
Sbjct: 702 LLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 3/204 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    D ++ +   P   ++  LL    K ++ D   SLF+ +   GL PD+   N +
Sbjct: 499 DEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTI 558

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ L + G  S A  +   ++ S    N  T+N +INGLC    + EA ++F  L     
Sbjct: 559 LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDL 618

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             ++ T N +I  L +      A+ LF   ++ +G +  PDV TY  I + L K+G +++
Sbjct: 619 QLDIFTANIMIGALLKGGRKEDAMDLF-ATISAYGLV--PDVETYCLIAENLIKEGSLEE 675

Query: 243 AKELLLQMKDRNINPNVITYNSLI 266
             EL   M++    PN    N+L+
Sbjct: 676 LDELFSAMEENGTAPNSRMLNALV 699



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 54/134 (40%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   +  MI  +    + ++ I++  L KN   D    +F  L S  L  D+F  N++
Sbjct: 569 SEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIM 628

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  L K G    A  +   I      P+  T+  +   L  EG + E   LF  +     
Sbjct: 629 IGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGT 688

Query: 183 DPNVVTFNTLINGL 196
            PN    N L+  L
Sbjct: 689 APNSRMLNALVRWL 702


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  295 bits (754), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 171/543 (31%), Positives = 282/543 (51%), Gaps = 42/543 (7%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT---VVS 102
            + + + DR +SG++  ++A+  FD ++       + +F  LL ++A+ +   T    VS
Sbjct: 14  ELERVIADRARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVS 73

Query: 103 LFKRLN---SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
           LF R+    SN + PDL   ++L  C C++G     F   G IL++ +  N V  N L+N
Sbjct: 74  LFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLN 133

Query: 160 GLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
           GLC   R+ EA   L +++  F C PNVV+ NTL+ GLC  +    AL+L   M  + G 
Sbjct: 134 GLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGG 193

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
            C P+VVTYN+IIDGLCK   VD+A+ +L  M D+ +  +V+TY+++I G C       A
Sbjct: 194 NCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRA 253

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           + +   M+D GV+PDVVT+N +I+  CK   +D+   +L+ MI +GV PD VTYN+++DG
Sbjct: 254 EGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG 313

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN------------------------ 374
            C    + RA  +   M+ K  + D+ +YN LI+                          
Sbjct: 314 LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPD 373

Query: 375 -----------CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
                      CK+ K  +A  ++  M+ + I+P+V  Y  LL G    G + D   L+D
Sbjct: 374 VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLD 433

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M  N + P+++ F   +    K   + EA+ +F  +        + TY  LI+ LCK+G
Sbjct: 434 LMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLG 493

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+  A   F+++ + G  P+ V  +++++ LC   + +KA +L  +M  +   P+ V F 
Sbjct: 494 RVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFN 553

Query: 544 TLL 546
           T++
Sbjct: 554 TIM 556



 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 168/520 (32%), Positives = 275/520 (52%), Gaps = 8/520 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI     P + ++  L+       ++  VV   + + + GL PD+   +LL++ LCK G 
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + A  +   ++R    PN   +  L++G  A G I +   L   +      PN   FN 
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           ++    +      A+ +F  M ++ G    PDVVTY  +ID LCK G VD A     QM 
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRM-SQHG--LSPDVVTYGILIDALCKLGRVDDAVLKFNQMI 506

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           +  + PN + +NSL+ G C VD W++A+ LF EM D GV+P+VV FN ++   C +G++ 
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM 566

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
              RL++ M + GV P+ ++YN+L+ G CL GR   A +L   MVS G + D+ SY+ L+
Sbjct: 567 VAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLL 626

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              CK  ++++A CL+REML + + P  +TY+T+L GLF      +A +L   M  +   
Sbjct: 627 RGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQ 686

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR--IETYNCLINGLCKMGRLKTAC 489
            D +T+   ++GLCK   V EA ++FQ++  C  +LR  I T+  +I+ L K GR K A 
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSL--CSKDLRPNIITFTIMIDVLFKGGRKKDAM 744

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            LF  +   G +P+VVT   M+  + +EG +D+ ++L L ME   C P  V    ++R  
Sbjct: 745 DLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSL 804

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           +   +  +    L K+      + + S +S ++ L S+++
Sbjct: 805 LGRGEIMRAGAYLSKIDEMNFSL-EASTTSLLISLFSREE 843



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 243/471 (51%), Gaps = 5/471 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G  T  EA   F CMI+    P +T + ILL   A       +  L   + +NG+ P+
Sbjct: 386 KNGKCT--EARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPN 443

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            ++ N+++    K  +   A  +  R+ +   +P+ VT+  LI+ LC  GR+ +A   F 
Sbjct: 444 NYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFN 503

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PN V FN+L+ GLC       A +LF EM ++     +P+VV +N+I+  LC
Sbjct: 504 QMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG---VRPNVVFFNTIMCNLC 560

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            +G V  A+ L+  M+   + PNVI+YN+LI G C      EA  L   M+  G++PD++
Sbjct: 561 NEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           +++ ++   CK G++D    L   M+++GV P  VTY++++ G     R S A+EL+++M
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM 680

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +  G + D+Y+YNI++N  CK   V++A  +++ + S+ +RP++IT+  ++  LF+ G  
Sbjct: 681 IKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRK 740

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            DA+ L   +  + +VP+  T+   +  + + G + E   +F A+    C       N +
Sbjct: 741 KDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAI 800

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           I  L   G +  A     ++       +  T S +I    +E   + A  L
Sbjct: 801 IRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 243/517 (47%), Gaps = 38/517 (7%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI     P + ++  ++  L K +  D    + + +   G+ PD+   N +I+ LCK   
Sbjct: 260 MIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 319

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  VL  ++     P+  T+N LI+G  + G   E  R  +++     DP+VVT++ 
Sbjct: 320 VDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSL 379

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++ LC+      A K+F  M+ +     KP+V  Y  ++ G    G +    +LL  M 
Sbjct: 380 LLDYLCKNGKCTEARKIFYCMIRKG---IKPNVTIYGILLHGYAARGAIADLTDLLDLMV 436

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              I+PN   +N ++C +       EA  +F  M  +G+ PDVVT+  +I+  CK G++D
Sbjct: 437 ANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVD 496

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY------ 365
                   MI  GV P++V +NSL+ G C V R  +A ELF  M  +G R +V       
Sbjct: 497 DAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIM 556

Query: 366 -----------------------------SYNILINANCKDQKVEDAVCLYREMLSERIR 396
                                        SYN LI  +C   + ++A  L   M+S  ++
Sbjct: 557 CNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLK 616

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P +I+Y+TLL G  + G + +A  L  +M    V P + T++T + GL       EA ++
Sbjct: 617 PDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKEL 676

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           +  +     +  I TYN ++NGLCK   +  A K+F  L  K   P+++T + MI  L K
Sbjct: 677 YLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFK 736

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            G+   A DL   + +   VP+ VT+C +++  +Q  
Sbjct: 737 GGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEG 773



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 242/481 (50%), Gaps = 3/481 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + ++  ++  L K +  D    + + +   G+  D+   + +I+ LCK      A  
Sbjct: 196 TPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEG 255

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VL  ++     P+ VT+N +I+GLC    +  A  + + +      P+VVT+NT+I+GLC
Sbjct: 256 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLC 315

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + +    A  + + M+++     KPD+ TYN +I G    G   +    L +M  R ++P
Sbjct: 316 KAQAVDRADGVLQHMIDKD---VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDP 372

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +V+TY+ L+   C      EA+ +F  M+  G++P+V  +  +++     G +  +  LL
Sbjct: 373 DVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLL 432

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           +LM+  G++P+   +N ++  +     I  A  +F  M   G   DV +Y ILI+A CK 
Sbjct: 433 DLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKL 492

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +V+DAV  + +M+++ + P+ + +N+L+ GL  V     A +L  +M    V P+   F
Sbjct: 493 GRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFF 552

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T +  LC  G V+ A ++  ++        + +YN LI G C  GR   A +L   +  
Sbjct: 553 NTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS 612

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G  PD+++  T++   CK G++D A  L  +M  K   P  VT+ T+L+G     + S+
Sbjct: 613 VGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE 672

Query: 558 V 558
            
Sbjct: 673 A 673



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 246/501 (49%), Gaps = 3/501 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E V   + M      P + ++++LL  L KN +      +F  +   G+ P++ +  +L+
Sbjct: 357 EVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILL 416

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +     G  +    +L  ++ +  +PN   FN ++     +  I EA  +F +++     
Sbjct: 417 HGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLS 476

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VVT+  LI+ LC+      A+  F +M+N+      P+ V +NS++ GLC     +KA
Sbjct: 477 PDVVTYGILIDALCKLGRVDDAVLKFNQMINDG---VTPNSVVFNSLVYGLCTVDRWEKA 533

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +EL  +M D+ + PNV+ +N+++C  C       A+ L   M   GV+P+V+++N +I  
Sbjct: 534 EELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGG 593

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           +C  G+ D+  +LL++M+  G+ PD ++Y++L+ G+C  GRI  A  LF  M+ KG    
Sbjct: 594 HCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPG 653

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y+ ++      ++  +A  LY  M+    +  + TYN +L+GL +   + +A K+  
Sbjct: 654 AVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQ 713

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            +   D+ P+  TF   ID L K G   +A+ +F +I +      + TY  ++  + + G
Sbjct: 714 SLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEG 773

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            L     LF  ++  G  PD V  + +I  L   G++ +A   L  ++  N      T  
Sbjct: 774 LLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTS 833

Query: 544 TLLRGFVQNNKKSKVVVLLHK 564
            L+  F +   K+    L  K
Sbjct: 834 LLISLFSREEYKNHAKSLPEK 854


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  295 bits (754), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 170/553 (30%), Positives = 279/553 (50%), Gaps = 36/553 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    LN   K G+  S++A   +  M+     P + +++ ++  L K +  D  + 
Sbjct: 200 DVVSYNTVLNGFFKEGD--SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAME 257

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ PD    N +++  C  G    A   L ++      PN VT++ L+N LC
Sbjct: 258 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC 317

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
             GR  EA ++F  +     +P++ T+ TL+ G   T+  LV +    +++   G     
Sbjct: 318 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYA-TKGALVEMHALLDLMVRNGIQPDH 376

Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                 IC                        P+VV Y ++ID LCK G VD A     Q
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  + PN+I Y SLI G C  D W +A+ L +EM+D G+  + + FN++I+ +CK+G+
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L +LM++ GV PD +TYN+L+DG CL G++  A +L  SMVS G + D+ +Y  
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  C+  +++DA+ L++EM+S  + P++ITYN +L GLF       A +L   +  + 
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
              +  T+   + GLCKN    EA+++FQ +     +L   T+N +I  L K GR+  A 
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            LF      G +PDV T S M   L ++G +++ +DL L ME   C        +++R  
Sbjct: 677 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKL 736

Query: 550 VQNNKKSKVVVLL 562
           +Q    ++    L
Sbjct: 737 LQRGDITRAGTYL 749



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 268/544 (49%), Gaps = 40/544 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVL 119
            +A + FD +++      +      L  +A++      VS + R+   G   + P +   
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKVTPTVHTY 95

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLN 178
            +LI C C+ G     F  LG +++  F  + +TF  L+ GLCA+ R  +A  +  +++ 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C P+V ++N L+ GLC    +  AL+L   M ++ G    PDVV+YN++++G  K+G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD----- 293
             DKA     +M DR I P+V+TY+S+I   C      +A  +   M+ NGV PD     
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275

Query: 294 ------------------------------VVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
                                         VVT+++++NY CK+G+  +  ++ + M +R
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD  TY +L+ G+   G +     L   MV  G + D + +NILI A  K +KV+ A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + ++ +M    + P+V+ Y T++  L + G++ DA+   ++M    + P+   + + I G
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC      +A ++   + +    L    +N +I+  CK GR+  + KLF  +   G  PD
Sbjct: 456 LCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 515

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           ++T +T+I   C  G+MD+A  LL  M +    P  VT+ TL+ G+ + ++    + L  
Sbjct: 516 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 575

Query: 564 KMAA 567
           +M +
Sbjct: 576 EMVS 579



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 266/531 (50%), Gaps = 24/531 (4%)

Query: 83  SFTILLTML-AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           +FT LL  L A  +  D +  + +R+   G  PD+F  N L+  LC    +  A  +L  
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 142 ILR---SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +         P+ V++N ++NG   EG   +A   + ++      P+VVT++++I  LC+
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +    A+++   MV   G +  PD +TYNSI+ G C  G   +A   L +M+   + PN
Sbjct: 249 AQAMDKAMEVLNTMVKN-GVM--PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 305

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+TY+SL+   C      EA+ +F  M   G++PD+ T+  ++      G + +++ LL+
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 365

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           LM++ G+ PD   +N L+  +    ++ +A  +F  M   G   +V  Y  +I+  CK  
Sbjct: 366 LMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 425

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            V+DA+  + +M+ E + P++I Y +L+ GL        A +LI +M    +  ++  F 
Sbjct: 426 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFN 485

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + ID  CK G V+E+ ++F  +     +  I TYN LI+G C  G++  A KL   +   
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PD+VT  T+I+  C+  +MD A  L  +M +    P+ +T+  +L+G     + +  
Sbjct: 546 GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA-- 603

Query: 559 VVLLHKMAAEKLVVS--------DLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                  AA++L VS        +LS  + ++  L K+    E L  F++L
Sbjct: 604 -------AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 234/481 (48%), Gaps = 11/481 (2%)

Query: 23  WCSFGRPPNPKTDLSSHHFKDGT-----SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKP 77
           +CS G+P      L      DG      + +  +N   K+G   S EA   FD M K   
Sbjct: 281 YCSSGQPKEAIGTLKKMR-SDGVEPNVVTYSSLMNYLCKNGR--STEARKIFDSMTKRGL 337

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + ++  LL   A       + +L   +  NG+ PD  V N+LI    K      A +
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V  ++ +    PN V +  +I+ LC  G + +A   F+++      PN++ + +LI+GLC
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                  A +L  EM++    IC  + + +NSIID  CK+G V ++++L   M    + P
Sbjct: 458 TCDKWDKAEELILEMLDR--GICL-NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           ++ITYN+LI G C      EA  L   M+  GV+PD+VT+  +IN  C+  +MD    L 
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M+  GV+P+ +TYN ++ G     R + A+EL+VS+   G + ++ +YNI+++  CK+
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
              ++A+ +++ +    ++    T+N ++  L + G + +A  L      N +VPD  T+
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           +   + L + G + E   +F ++    C       N ++  L + G +  A      +  
Sbjct: 695 SLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754

Query: 498 K 498
           K
Sbjct: 755 K 755



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 137/301 (45%), Gaps = 15/301 (4%)

Query: 53  DRH-KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG 111
           D H K G +  +E    FD M+++   P + ++  L+       + D    L   + S G
Sbjct: 489 DSHCKEGRVIESEK--LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
           + PD+     LIN  C++     A  +   ++ S  +PN +T+N ++ GL    R   A 
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV----TY 227
            L+  +        + T+N +++GLC+   T  AL++F+ +       C  D+     T+
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL-------CLTDLQLETRTF 659

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N +I  L K G +D+AK+L        + P+V TY+ +          +E   LF+ M +
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV-GRIS 346
           NG   D    N+++    + G + +    L ++ ++  + +  T + L++   +V  +IS
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESSPIVWEQIS 779

Query: 347 R 347
           R
Sbjct: 780 R 780


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 164/485 (33%), Positives = 266/485 (54%), Gaps = 38/485 (7%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           +I  ++A+  F  M+K +P P +  F  LL+ + K K+YD V+SL K++   G+  DL+ 
Sbjct: 63  DIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY- 121

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
                                             TFN +IN  C   ++  A  +  K+ 
Sbjct: 122 ----------------------------------TFNIVINCFCCCFQVSLALSVLGKML 147

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +P+ VT  +L+NG CR      A+ L ++MV E G   +PD+V YN+IID LCK  
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-EIGY--RPDIVAYNAIIDSLCKTR 204

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V+ A +   ++  + I PNV+TY +L+ G C    W +A  L  +M+   + P+V+T++
Sbjct: 205 RVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYS 264

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+++   K+GK+ +   + E M++  ++PD VTY+SL++G CL  RI  A ++F  MVSK
Sbjct: 265 ALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  DV SYN LIN  CK ++VED + L+R+M    +  + +TYNTL+ G FQVG++  A
Sbjct: 325 GCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKA 384

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            +   +M    V PD +T+   + GLC NG + +A+ +F+ ++  + +L I TY  +I G
Sbjct: 385 QEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQG 444

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           +CK G+++ A  LF  L  KG  PD+VT +TM+  LC +G   +   L   M+ +  + +
Sbjct: 445 MCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504

Query: 539 EVTFC 543
           +   C
Sbjct: 505 DSMLC 509



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 225/426 (52%), Gaps = 3/426 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ V FN L++ +    +      L KK+ V     ++ TFN +IN  C      +AL +
Sbjct: 83  PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M+ + G   +PD VT  S+++G C+   V  A  L+ +M +    P+++ YN++I  
Sbjct: 143 LGKML-KLGY--EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDS 199

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C      +A   F E+   G++P+VVT+ A++N  C  G+ +   RLL  MI+R + P+
Sbjct: 200 LCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPN 259

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +TY++L+D F   G++  A+E+F  MV      D+ +Y+ LIN  C   ++++A  ++ 
Sbjct: 260 VITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+S+   P V++YNTL++G  +   + D +KL  KM    +V ++ T+ T I G  + G
Sbjct: 320 LMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVG 379

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            V +A + F  + +      I TYN L+ GLC  G L+ A  +F  +Q      D+VT +
Sbjct: 380 DVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYT 439

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I  +CK G+++ A  L   +  K   P  VT+ T++ G      + +V  L  KM  E
Sbjct: 440 TVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQE 499

Query: 569 KLVVSD 574
            L+ +D
Sbjct: 500 GLMKND 505



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 149/295 (50%)

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  LF EM+     P +V FN +++   K  K D V  L + M   G+  D  T+N ++
Sbjct: 68  DAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           + FC   ++S A  +   M+  G   D  +   L+N  C+  +V DAV L  +M+    R
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR 187

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P ++ YN ++  L +   + DAL    ++    + P+  T+   ++GLC +G   +A ++
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
            + +   K    + TY+ L++   K G++  A ++F  +      PD+VT S++I+ LC 
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             ++D+AN +   M +K C P  V++ TL+ GF +  +    + L  KM+   LV
Sbjct: 308 HDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 35/214 (16%)

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL----NDVV 431
           +D K+ DA+ L+REM+  R  PS++ +N LLS + ++      + L  KM++    ND+ 
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 432 -------------------------------PDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
                                          PD  T  + ++G C+   V +AV +   +
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                   I  YN +I+ LCK  R+  A   F  +  KG  P+VVT + +++ LC  G+ 
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           + A  LL DM  +   P+ +T+  LL  FV+N K
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGK 275


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 170/553 (30%), Positives = 279/553 (50%), Gaps = 36/553 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    LN   K G+  S++A   +  M+     P + +++ ++  L K +  D  + 
Sbjct: 200 DVVSYNTVLNGFFKEGD--SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAME 257

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ PD    N +++  C  G    A   L ++      PN VT++ L+N LC
Sbjct: 258 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC 317

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
             GR  EA ++F  +     +P++ T+ TL+ G   T+  LV +    +++   G     
Sbjct: 318 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYA-TKGALVEMHALLDLMVRNGIQPDH 376

Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                 IC                        P+VV Y ++ID LCK G VD A     Q
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  + PN+I Y SLI G C  D W +A+ L +EM+D G+  + + FN++I+ +CK+G+
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L +LM++ GV PD +TYN+L+DG CL G++  A +L  SMVS G + D+ +Y  
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  C+  +++DA+ L++EM+S  + P++ITYN +L GLF       A +L   +  + 
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
              +  T+   + GLCKN    EA+++FQ +     +L   T+N +I  L K GR+  A 
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            LF      G +PDV T S M   L ++G +++ +DL L ME   C        +++R  
Sbjct: 677 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKL 736

Query: 550 VQNNKKSKVVVLL 562
           +Q    ++    L
Sbjct: 737 LQRGDITRAGTYL 749



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 268/543 (49%), Gaps = 40/543 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVLN 120
           +A + FD +++      +      L  +A++      VS + R+   G   + P +    
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLNV 179
           +LI C C+ G     F  LG +++  F  + +TF  L+ GLCA+ R  +A  +  +++  
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             C P+V ++N L+ GLC    +  AL+L   M ++ G    PDVV+YN++++G  K+G 
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD------ 293
            DKA     +M DR I P+V+TY+S+I   C      +A  +   M+ NGV PD      
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276

Query: 294 -----------------------------VVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
                                        VVT+++++NY CK+G+  +  ++ + M +RG
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PD  TY +L+ G+   G +     L   MV  G + D + +NILI A  K +KV+ A+
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            ++ +M    + P+V+ Y T++  L + G++ DA+   ++M    + P+   + + I GL
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C      +A ++   + +    L    +N +I+  CK GR+  + KLF  +   G  PD+
Sbjct: 457 CTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 516

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +T +T+I   C  G+MD+A  LL  M +    P  VT+ TL+ G+ + ++    + L  +
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576

Query: 565 MAA 567
           M +
Sbjct: 577 MVS 579



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 266/531 (50%), Gaps = 24/531 (4%)

Query: 83  SFTILLTML-AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           +FT LL  L A  +  D +  + +R+   G  PD+F  N L+  LC    +  A  +L  
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 142 ILR---SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +         P+ V++N ++NG   EG   +A   + ++      P+VVT++++I  LC+
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +    A+++   MV   G +  PD +TYNSI+ G C  G   +A   L +M+   + PN
Sbjct: 249 AQAMDKAMEVLNTMVKN-GVM--PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 305

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+TY+SL+   C      EA+ +F  M   G++PD+ T+  ++      G + +++ LL+
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 365

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           LM++ G+ PD   +N L+  +    ++ +A  +F  M   G   +V  Y  +I+  CK  
Sbjct: 366 LMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 425

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            V+DA+  + +M+ E + P++I Y +L+ GL        A +LI +M    +  ++  F 
Sbjct: 426 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFN 485

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + ID  CK G V+E+ ++F  +     +  I TYN LI+G C  G++  A KL   +   
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PD+VT  T+I+  C+  +MD A  L  +M +    P+ +T+  +L+G     + +  
Sbjct: 546 GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA-- 603

Query: 559 VVLLHKMAAEKLVVS--------DLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                  AA++L VS        +LS  + ++  L K+    E L  F++L
Sbjct: 604 -------AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 234/481 (48%), Gaps = 11/481 (2%)

Query: 23  WCSFGRPPNPKTDLSSHHFKDGT-----SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKP 77
           +CS G+P      L      DG      + +  +N   K+G   S EA   FD M K   
Sbjct: 281 YCSSGQPKEAIGTLKKMR-SDGVEPNVVTYSSLMNYLCKNGR--STEARKIFDSMTKRGL 337

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + ++  LL   A       + +L   +  NG+ PD  V N+LI    K      A +
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V  ++ +    PN V +  +I+ LC  G + +A   F+++      PN++ + +LI+GLC
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                  A +L  EM++    IC  + + +NSIID  CK+G V ++++L   M    + P
Sbjct: 458 TCDKWDKAEELILEMLDR--GICL-NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           ++ITYN+LI G C      EA  L   M+  GV+PD+VT+  +IN  C+  +MD    L 
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M+  GV+P+ +TYN ++ G     R + A+EL+VS+   G + ++ +YNI+++  CK+
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
              ++A+ +++ +    ++    T+N ++  L + G + +A  L      N +VPD  T+
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           +   + L + G + E   +F ++    C       N ++  L + G +  A      +  
Sbjct: 695 SLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754

Query: 498 K 498
           K
Sbjct: 755 K 755



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 15/309 (4%)

Query: 53  DRH-KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG 111
           D H K G +  +E    FD M+++   P + ++  L+       + D    L   + S G
Sbjct: 489 DSHCKEGRVIESEK--LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
           + PD+     LIN  C++     A  +   ++ S  +PN +T+N ++ GL    R   A 
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV----TY 227
            L+  +        + T+N +++GLC+   T  AL++F+ +       C  D+     T+
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL-------CLTDLQLETRTF 659

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N +I  L K G +D+AK+L        + P+V TY+ +          +E   LF+ M +
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV-GRIS 346
           NG   D    N+++    + G + +    L ++ ++  + +  T + L++   +V  +IS
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESSPIVWEQIS 779

Query: 347 RARELFVSM 355
           R   L V++
Sbjct: 780 RISHLSVNL 788


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 168/508 (33%), Positives = 274/508 (53%), Gaps = 9/508 (1%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFK-RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
           +  + I+L  L +  +    + +F+  +  +G+ P +   N +IN LCK         + 
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             ++     P+ VT+N LI+ LC  G + EA RL   ++  +C PNVVT++ LINGLC+ 
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN--INP 257
                A +L +EM  +   +  P+++TYNS +DGLCK     +A EL+  ++D +  ++P
Sbjct: 300 GRIDEARELIQEMTRKSCDVL-PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 358

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + +T+++LI G C      EA  +F +M+  G  P+V+T+NA++N  CK  KM++ + ++
Sbjct: 359 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M+ +GV PD +TY+ L+D FC   R+  A EL   M S+GC  +V ++N +I+  CK 
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 478

Query: 378 QKVEDAVCLYREM-LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
            +  +A  ++ +M L   + P  ITY TL+ GLF+ G  G A  L+D M      PD++ 
Sbjct: 479 DRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYA 534

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           F   I+GL K G V  A+QV+  +   +      T+N LI G CK G  + A  LF  + 
Sbjct: 535 FNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 594

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            K   PDV+T   +I  LCK GQ++ A D+L  M      P+ VT+  L+ G  ++ +  
Sbjct: 595 AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIE 654

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           +    L +M +   V   ++  S V  L
Sbjct: 655 EACQFLEEMVSSGCVPDSITYGSLVYAL 682



 Score =  291 bits (746), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 188/597 (31%), Positives = 294/597 (49%), Gaps = 78/597 (13%)

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
            ++ SP   +F+ L+  L K  Q D   S+F  + + G  P++   N L+N LCK     
Sbjct: 353 SLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKME 412

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            A  ++  ++    TP+ +T++ L++  C   R+ EA  L   +    C PNVVTFN++I
Sbjct: 413 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 472

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           +GLC++  +  A ++F++M  + G +  PD +TY ++IDGL + G   +A+ LL  M D 
Sbjct: 473 DGLCKSDRSGEAFQMFDDMALKHGLV--PDKITYCTLIDGLFRTGRAGQAEALLDAMPDP 530

Query: 254 N-------IN------------------------PNVITYNSLICGFCCVDDWKEAKCLF 282
           +       IN                        P+ +T+N LI G C   ++++A  LF
Sbjct: 531 DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALF 590

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM+   +QPDV+TF A+I+  CK G+++    +L+LM   GV P+ VTYN+L+ G C  
Sbjct: 591 EEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS 650

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           GRI  A +    MVS GC  D  +Y  L+ A C+  + +DA+ L  E+ S    P  +TY
Sbjct: 651 GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTY 710

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF----Q 458
           N L+ GL++ G    A+ ++++M      PD  T+ T ID LCK G + EA ++      
Sbjct: 711 NILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS 770

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK-------------------- 498
            +  C C   + TY+ LINGLCK+GR+  A +L   +  K                    
Sbjct: 771 RVSRC-CVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCK 829

Query: 499 ----------------GPI---PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
                           G +   PD VT ST+I  LCK GQ D+A ++  DM A   VP+ 
Sbjct: 830 QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNV 889

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           VT+  L+ G  + +K  +   ++  M  +K V  D+   S +VD   K     E L 
Sbjct: 890 VTYNVLMNGLCKTDKMERAHAMIESM-VDKGVTPDVITYSVLVDAFCKASHVDEALE 945



 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 166/532 (31%), Positives = 272/532 (51%), Gaps = 37/532 (6%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M +   +P + ++  ++  L K+ +    + LF+ L   G  PD+   N LI+ LCK G 
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 266

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD--PNVVTF 189
              A  + G +      PN VT++ LINGLC  GRI EA  L +++   +CD  PN++T+
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 326

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           N+ ++GLC+   T  A +L   + +  G++   PD VT++++IDGLCK G +D+A  +  
Sbjct: 327 NSFLDGLCKQSMTAEACELMRSLRD--GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M      PNVITYN+L+ G C  D  + A  +   M+D GV PDV+T++ +++  CK  
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 444

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC-------- 360
           ++D+   LL  M  RG  P+ VT+NS++DG C   R   A ++F  M  K          
Sbjct: 445 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITY 504

Query: 361 ------------------------RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
                                     D Y++N  IN   K   V  A+ +Y  ML   + 
Sbjct: 505 CTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELV 564

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P  +T+N L++G  + GN   A  L ++M   ++ PD  TF   IDGLCK G V  A  +
Sbjct: 565 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 624

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              + N      + TYN L++GLCK GR++ AC+    +   G +PD +T  ++++ LC+
Sbjct: 625 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 684

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
             + D A  L+ ++++    P  VT+  L+ G  ++ +  + + +L +M  +
Sbjct: 685 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGK 736



 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 176/573 (30%), Positives = 303/573 (52%), Gaps = 43/573 (7%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A    + M+    +P + ++++L+    K  + D  + L   + S G  P++   N +I+
Sbjct: 414 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 473

Query: 125 CLCKMGITSGAFVVL--------------------------GR------ILRSCFTPNTV 152
            LCK   +  AF +                           GR      +L +   P+T 
Sbjct: 474 GLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTY 533

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            FN  INGL   G +  A +++ ++      P+ VTFN LI G C+  N   A  LFEEM
Sbjct: 534 AFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 593

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           V +     +PDV+T+ ++IDGLCK G V+ A+++L  M +  + PNV+TYN+L+ G C  
Sbjct: 594 VAKN---LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS 650

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
              +EA     EM+ +G  PD +T+ +++   C+  + D   +L+  +   G +PDTVTY
Sbjct: 651 GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTY 710

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N L+DG    G+  +A  +   MV KG   DV +YN LI++ CK   +E+A  L+ +M S
Sbjct: 711 NILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS 770

Query: 393 ERIR---PSVITYNTLLSGLFQVGNLGDALKLIDKMQLN--DVVPDSFTFATYIDGLCKN 447
              R   P+V+TY+ L++GL +VG + +A +LI +M     DV+P+  T+ +++DGLCK 
Sbjct: 771 RVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQ 830

Query: 448 GFVLEAVQVFQAIRNCKCELRIET--YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
             + EA ++ +++R+    +  +T  ++ LI+GLCK G+   AC +F  +   G +P+VV
Sbjct: 831 SMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVV 890

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T + +++ LCK  +M++A+ ++  M  K   P  +T+  L+  F + +   + + LLH M
Sbjct: 891 TYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGM 950

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           A+     + ++ +S ++D L K  +  E    F
Sbjct: 951 ASRGCTPNVVTFNS-IIDGLCKSDQSGEAFQMF 982



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 169/480 (35%), Positives = 261/480 (54%), Gaps = 20/480 (4%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            KSG I   EA  F + M+     P   ++  L+  L +  + D  + L   L S G  PD
Sbjct: 649  KSGRI--EEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 706

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                N+L++ L K G T  A  VL  ++     P+ VT+N LI+ LC  G + EA RL  
Sbjct: 707  TVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 766

Query: 176  KLNVFA---CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
             ++      C PNVVT++ LINGLC+      A +L +EM+ +   +  P+++TYNS +D
Sbjct: 767  DMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVL-PNIITYNSFLD 825

Query: 233  GLCKDGFVDKAKELLLQMKDRN--INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
            GLCK   + +A EL+  ++D +  ++P+ +T+++LI G C      EA  +F +M+  G 
Sbjct: 826  GLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGY 885

Query: 291  QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
             P+VVT+N ++N  CK  KM++ + ++E M+ +GV PD +TY+ L+D FC    +  A E
Sbjct: 886  VPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALE 945

Query: 351  LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM-LSERIRPSVITYNTLLSGL 409
            L   M S+GC  +V ++N +I+  CK  +  +A  ++ +M L   + P  ITY TL+ GL
Sbjct: 946  LLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGL 1005

Query: 410  FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            F+ G  G A  L+D M      PD++ F   I+GL K G V  A+      R  + EL  
Sbjct: 1006 FRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRALH-----RMLELELVP 1056

Query: 470  E--TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            +  T+N LI G CK G  + A  LF  +  K   PDV+T   +I  LCK GQ++   D++
Sbjct: 1057 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 169/556 (30%), Positives = 285/556 (51%), Gaps = 41/556 (7%)

Query: 51   LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
            +N   K G+++   A+  ++ M++++  P   +F IL+    K   ++   +LF+ + + 
Sbjct: 539  INGLSKLGDVS--RALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 596

Query: 111  GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
             L PD+     LI+ LCK G    A  +L  +      PN VT+N L++GLC  GRI EA
Sbjct: 597  NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 656

Query: 171  ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             +  +++    C P+ +T+ +L+  LCR   T  AL+L  E+   FG    PD VTYN +
Sbjct: 657  CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL-KSFG--WDPDTVTYNIL 713

Query: 231  IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
            +DGL K G  ++A  +L +M  +  +P+V+TYN+LI   C   D +EA+ L  +M     
Sbjct: 714  VDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVS 773

Query: 291  Q---PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG--VNPDTVTYNSLMDGFCLVGRI 345
            +   P+VVT++ +IN  CK G++D+   L++ M+++   V P+ +TYNS +DG C    +
Sbjct: 774  RCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMM 833

Query: 346  SRARELFVSMVSKGCR--HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            + A EL  S+     R   D  +++ LI+  CK  + ++A  ++ +M++    P+V+TYN
Sbjct: 834  AEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYN 893

Query: 404  TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
             L++GL +   +  A  +I+ M    V PD  T++  +D  CK   V EA+++   + + 
Sbjct: 894  VLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASR 953

Query: 464  KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK-GPIPDVVTCSTMIHWLCKEGQMDK 522
             C   + T+N +I+GLCK  +   A ++F  +  K G  PD +T  T+I  L + G   +
Sbjct: 954  GCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQ 1013

Query: 523  ANDLL-----LDMEAKNC-----------------------VPSEVTFCTLLRGFVQNNK 554
            A  LL      D  A NC                       VP +VTF  L+ G  +   
Sbjct: 1014 AEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGN 1073

Query: 555  KSKVVVLLHKMAAEKL 570
              +   L  +M A+ L
Sbjct: 1074 FEQASALFEEMVAKNL 1089



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 215/427 (50%), Gaps = 14/427 (3%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F     +FN  +N L   G   +A  LF+      C PN  T++TL+      R T  A 
Sbjct: 107 FKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLL------RATYKAG 160

Query: 207 KLFEEMVNEFGAICKPD--VVTYNSIIDGLCKDGFVDKAKELLL-QMKDRNINPNVITYN 263
              E  +  F  I      V  YN ++  LC+ G   +A E+   +M    + P ++TYN
Sbjct: 161 GDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYN 220

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           ++I G C  ++      LF E+++ G  PDVVT+N +I+  CK G +++  RL   M  R
Sbjct: 221 TIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 280

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR--HDVYSYNILINANCKDQKVE 381
              P+ VTY+ L++G C VGRI  AREL   M  K C    ++ +YN  ++  CK     
Sbjct: 281 SCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 340

Query: 382 DAVCLYREML--SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +A  L R +   S R+ P  +T++TL+ GL + G + +A  + D M     VP+  T+  
Sbjct: 341 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNA 400

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            ++GLCK   +  A  + +++ +      + TY+ L++  CK  R+  A +L H +  +G
Sbjct: 401 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 460

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN-CVPSEVTFCTLLRGFVQNNKKSKV 558
             P+VVT +++I  LCK  +  +A  +  DM  K+  VP ++T+CTL+ G  +  +  + 
Sbjct: 461 CTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQA 520

Query: 559 VVLLHKM 565
             LL  M
Sbjct: 521 EALLDAM 527



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 158/348 (45%), Gaps = 42/348 (12%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL------------- 335
           G +  + +FN  +N   K G   K   L    +     P+  TY++L             
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 336 ---------------------MDGFCLVGRISRARELFVS-MVSKGCRHDVYSYNILINA 373
                                +   C  G  +RA E+F   M   G    + +YN +IN 
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK  ++   + L+ E++     P V+TYNTL+  L + G+L +A +L   M     VP+
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL--RIETYNCLINGLCKMGRLKTACKL 491
             T++  I+GLCK G + EA ++ Q +    C++   I TYN  ++GLCK      AC+L
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345

Query: 492 FHRLQHKGPI---PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
              L+  G +   PD VT ST+I  LCK GQ+D+A  +  DM A   VP+ +T+  L+ G
Sbjct: 346 MRSLR-DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG 404

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
             + +K  +   ++  M  +K V  D+   S +VD   K  +  E L 
Sbjct: 405 LCKADKMERAHAMIESM-VDKGVTPDVITYSVLVDAFCKASRVDEALE 451


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 172/571 (30%), Positives = 300/571 (52%), Gaps = 37/571 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +  ++A + F  M+     P + ++  L+  L K +  D  V++ + +   G+ PD
Sbjct: 212 KEGEV--DKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPD 269

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N++I   C +G    A  +L ++  S   P+ VT++ LI   C  GR  EA  +F 
Sbjct: 270 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFD 329

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALK-LFEEMVNE------------------F 216
            +      PN   ++ L++G   T+  L+ ++ L + M+ +                   
Sbjct: 330 SMVRKGQKPNSTIYHILLHGYA-TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 388

Query: 217 GAICK--------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           GA+ K              PDVV+Y+++I  LCK G V+ A     QM    ++PN+I++
Sbjct: 389 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISF 448

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            SLI G C + +WK+ + L  EM++ G+ PD +  N +++  CK+G++ +     +++I 
Sbjct: 449 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 508

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            GV PD V+YN+L+DG+C VG++  + +    MVS G R D ++YN L+N   K+ +VED
Sbjct: 509 IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVED 568

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A+ LYREM  + ++   IT N +L GLFQ G +  A +L  KM          T+ T + 
Sbjct: 569 ALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLG 628

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLC+N  V EA+++F+ +R+ + EL + T++ +IN L K+GR+  A  LF  +  +GP+P
Sbjct: 629 GLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVP 688

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           DV+T S MI    +EG ++++++L L ME   C         ++R  ++     +    L
Sbjct: 689 DVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYL 748

Query: 563 HKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            K+  EK    + S ++ ++ ++S+ K  +E
Sbjct: 749 TKI-DEKNFSLEASTAALLIPIVSEKKYQKE 778



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 169/563 (30%), Positives = 280/563 (49%), Gaps = 43/563 (7%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT------ 99
            + + + +RH+SG++   +A+  FD ++       + +F  +LT++A+     +      
Sbjct: 14  ELERIILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAA 73

Query: 100 -VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLI 158
             VSLF  +  +G+     ++ +LI C C +G    AF      L++ +    VT N LI
Sbjct: 74  LAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLI 133

Query: 159 NGLCAEGRIMEAARL-FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
            GLC   R  +A  + F+++      P+V ++N LI GLC  + +  AL+L   M  + G
Sbjct: 134 KGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGG 193

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
             C P+VV+YN++IDG  K+G VDKA  L  +M  + + P+V+TYNSLI G C      +
Sbjct: 194 YNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDK 253

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +   M D GV PD  T+N MI   C  G++++  RLL+ M   G+ PD VTY+ L+ 
Sbjct: 254 AVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQ 313

Query: 338 GFCLVGRISRARELFVSMVSKGCRHD--VY------------------------------ 365
            +C +GR + AR +F SMV KG + +  +Y                              
Sbjct: 314 YYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPF 373

Query: 366 ---SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
              ++NILI A  K   V+ A+  + EM    +RP V++Y+T++  L + G + DA+   
Sbjct: 374 EHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHF 433

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M    + P+  +F + I GLC  G   +  ++   + N          N +++ LCK 
Sbjct: 434 NQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKE 493

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GR+  A   F  + H G  PDVV+ +T+I   C  G+MD++   L  M +    P   T+
Sbjct: 494 GRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTY 553

Query: 543 CTLLRGFVQNNKKSKVVVLLHKM 565
            +LL G+ +N +    + L  +M
Sbjct: 554 NSLLNGYFKNGRVEDALALYREM 576



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 122/275 (44%), Gaps = 14/275 (5%)

Query: 308 GKMDKVNRLLELMIQRGVNPDTV-TYNSLMDGFCLVGRISRARE-------LFVSMVSKG 359
           G+ D +N   EL+ Q    P +V  +NS++         S  R        LF +MV  G
Sbjct: 29  GREDALNLFDELLPQ--ARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSG 86

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
                    ILI   C   +++ A   +   L    R   +T N L+ GL       DA+
Sbjct: 87  VNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAM 146

Query: 420 KLI-DKMQLNDVVPDSFTFATYIDGLC---KNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            ++  +M      PD F++   I GLC   K+   LE +    A     C   + +YN +
Sbjct: 147 DMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTV 206

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+G  K G +  A  LFH +  +G  PDVVT +++I  LCK   MDKA  +L  M  K  
Sbjct: 207 IDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGV 266

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           +P   T+  ++RG+    +  + V LL KM+   L
Sbjct: 267 MPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGL 301


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 161/508 (31%), Positives = 267/508 (52%), Gaps = 41/508 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E   F + M+     P +   T L+    +  +      + + L  +G  PD+   N++I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G  + A  VL R+     +P+ VT+N ++  LC  G++ +A  +  ++    C 
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V+T+  LI   CR      A+KL +EM +     C PDVVTYN +++G+CK+G +D+A
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRG---CTPDVVTYNVLVNGICKEGRLDEA 293

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            + L  M      PNVIT+N ++   C    W +A+ L  +M+  G  P VVTFN +IN+
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G + +   +LE M Q G  P++++YN L+ GFC   ++ RA E    MVS+GC  D
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +YN ++ A CKD KVEDAV +  ++ S+   P +ITYNT++ GL + G  G A+KL+D
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+  D+ PD+ T+++ + GL + G V EA++ F                          
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE------------------------ 509

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
                   F R+   G  P+ VT ++++  LCK  Q D+A D L+ M  + C P+E ++ 
Sbjct: 510 --------FERM---GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYT 558

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            L+ G        + + LL+++  + L+
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 226/420 (53%), Gaps = 6/420 (1%)

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
           S F    V  N  +  +   G + E  +  + +      P+++   TLI G CR   T  
Sbjct: 96  SSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRK 155

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A K+ E ++   GA+  PDV+TYN +I G CK G ++ A  +L +M   +++P+V+TYN+
Sbjct: 156 AAKILE-ILEGSGAV--PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNT 209

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           ++   C     K+A  +   M+     PDV+T+  +I   C+D  +    +LL+ M  RG
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD VTYN L++G C  GR+  A +    M S GC+ +V ++NI++ + C   +  DA 
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L  +ML +   PSV+T+N L++ L + G LG A+ +++KM  +   P+S ++   + G 
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           CK   +  A++  + + +  C   I TYN ++  LCK G+++ A ++ ++L  KG  P +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +T +T+I  L K G+  KA  LL +M AK+  P  +T+ +L+ G  +  K  + +   H+
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 214/414 (51%), Gaps = 7/414 (1%)

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           V  N  +  + RT       K  E MV        PD++   ++I G C+ G   KA ++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNV---PDIIPCTTLIRGFCRLGKTRKAAKI 159

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L  ++     P+VITYN +I G+C   +   A  +   M    V PDVVT+N ++   C 
Sbjct: 160 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCD 216

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            GK+ +   +L+ M+QR   PD +TY  L++  C    +  A +L   M  +GC  DV +
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN+L+N  CK+ ++++A+    +M S   +P+VIT+N +L  +   G   DA KL+  M 
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                P   TF   I+ LC+ G +  A+ + + +    C+    +YN L++G CK  ++ 
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +   R+  +G  PD+VT +TM+  LCK+G+++ A ++L  + +K C P  +T+ T++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRH 600
            G  +  K  K + LL +M A+ L    ++ SS +V  LS++ K  E +  F  
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS-LVGGLSREGKVDEAIKFFHE 509



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 207/407 (50%), Gaps = 8/407 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G I  N A+   D   +M  SP + ++  +L  L  + +    + +  R+     +PD
Sbjct: 184 KAGEI--NNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD 238

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +    +LI   C+      A  +L  +     TP+ VT+N L+NG+C EGR+ EA +   
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +    C PNV+T N ++  +C T   + A KL  +M+ +  +   P VVT+N +I+ LC
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS---PSVVTFNILINFLC 355

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           + G + +A ++L +M      PN ++YN L+ GFC       A      M+  G  PD+V
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N M+   CKDGK++    +L  +  +G +P  +TYN+++DG    G+  +A +L   M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            +K  + D  +Y+ L+    ++ KV++A+  + E     IRP+ +T+N+++ GL +    
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
             A+  +  M      P+  ++   I+GL   G   EA+++   + N
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 31/264 (11%)

Query: 330 VTYNSLMDGFCLVGRI----SRARELFVSMVSKGCRHDVYSYN-------ILINA----- 373
           V+ +S  +GFCL+ +      R  +L VS  + G                +L++A     
Sbjct: 5   VSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVE 64

Query: 374 ----NCKDQKVEDAVCLYREMLSERIRPSV--------ITYNTLLSGLFQVGNLGDALKL 421
               N + QK E     Y          SV        +  N  L  + + G L +  K 
Sbjct: 65  SSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKF 124

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ++ M  +  VPD     T I G C+ G   +A ++ + +        + TYN +I+G CK
Sbjct: 125 LENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK 184

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G +  A  +  R+      PDVVT +T++  LC  G++ +A ++L  M  ++C P  +T
Sbjct: 185 AGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
           +  L+    +++     + LL +M
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEM 265


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 157/507 (30%), Positives = 274/507 (54%), Gaps = 4/507 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F  M K  P P   ++  ++  L+K+ + D  + L + +  NG  P++F  N +
Sbjct: 213 SDAVLHFREMSKTCP-PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTV 271

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK      A  +L +++     P+ V++  +INGLC   ++ EA R+  K+    C
Sbjct: 272 LHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGC 331

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV+T+ TL++G CR  +   A++L  +M  E G   +P+ +TYN+I+   C+   +++
Sbjct: 332 QPNVITYGTLVDGFCRVGDLDGAVELVRKM-TERGY--RPNAITYNNIMHVFCRRNDMER 388

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++L  M      P+ I Y+++I GFC     +EA  L  +M+  G +PDV   + +I+
Sbjct: 389 AHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLID 448

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK   +D    LL + I     PD V Y+ L+   C   R+  A      MV   C  
Sbjct: 449 ALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYP 508

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV +YN +++  CK +++ DA  L+  M +  + P V+TY+ ++    +  NL  A K++
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+    VPD  T++  I+GLCK G V +A  VFQ +  C C   + TYN LI+GLCK+
Sbjct: 569 ERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKI 628

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            +++ A ++   ++ +   PD +T + +I+ LC   ++++A  +L +M+ K C+P  +T+
Sbjct: 629 NKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTY 688

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEK 569
            TLLR   + N    V  LL +M A +
Sbjct: 689 GTLLRALQKTNNLELVEQLLKEMEATE 715



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 166/505 (32%), Positives = 276/505 (54%), Gaps = 8/505 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F   I+ +      +++ L++   +  +      LF  +N  GL     V   +
Sbjct: 143 SQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSI 202

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVF 180
           +  LC  G  S A +    + ++C  P++VT+N +INGL    R+ +A RL +++  N F
Sbjct: 203 LRGLCDAGQCSDAVLHFREMSKTC-PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGF 261

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
           A  PNV ++NT+++G C+      AL L E+MV      C PDVV+Y ++I+GLCK   V
Sbjct: 262 A--PNVFSYNTVLHGFCKANRVENALWLLEQMVTRG---CPPDVVSYTTVINGLCKLDQV 316

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D+A  ++ +M  R   PNVITY +L+ GFC V D   A  L  +M + G +P+ +T+N +
Sbjct: 317 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 376

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  C+   M++ +++L++MIQ G  PD + Y++++ GFC  G++  A +L   M+ +GC
Sbjct: 377 MHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGC 436

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
           R DV   + LI+A CK   ++ A  L R  +     P V+ Y+ L+  L +   L +A  
Sbjct: 437 RPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAES 496

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
            +D M  N   PD  T+ + +DGLCK+  + +A  +F  +R       + TY+ +I+  C
Sbjct: 497 WLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFC 556

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K   L +A K+  R++    +PDVVT S +I+ LCK G +DKA D+  +M    C P+ V
Sbjct: 557 KDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLV 616

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
           T+ TL+ G  + NK  +   +L  M
Sbjct: 617 TYNTLIDGLCKINKVEQAAEMLEIM 641



 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 167/469 (35%), Positives = 251/469 (53%), Gaps = 6/469 (1%)

Query: 80   GMTSFTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVV 138
            G  + T++  +L   +  D  +  F    S  G   D +  N L+  L ++     A  V
Sbjct: 807  GKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQV 866

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
                L  C +PN  TF  LI+GLC  G I  A  L K++       NV+  N +I GLC 
Sbjct: 867  YRNKL--CCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCS 924

Query: 199  TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             R    AL+LF+EM  E    C PDV TY++I+D L K G VD A  L+  M  +  +PN
Sbjct: 925  ARKLDSALELFKEM--EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPN 982

Query: 259  VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            V+TY+SL+ G C      EA  L   M  +G  P++VT+N +I+ +CK G++D+   LLE
Sbjct: 983  VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 1042

Query: 319  LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
             M+  G  P+ VTY  L+D FC  G+   A  L   MV KG   ++++YN L++  CK  
Sbjct: 1043 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 1102

Query: 379  KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +VE A  L   M+ +   P+V++YNT+++GL +   + + + L+++M  N+ VPD  TF 
Sbjct: 1103 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 1162

Query: 439  TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
            T ID +CK   V  A ++F  I+   C   + TYN L++GLCK  R   A  L   +  K
Sbjct: 1163 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 1222

Query: 499  -GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
             G  PD++T +T+I  LCK  ++D+A  L L M +    P +VT+  ++
Sbjct: 1223 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVI 1271



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 180/557 (32%), Positives = 282/557 (50%), Gaps = 41/557 (7%)

Query: 78   SPGMTSFTILLTMLAK-----------------------------------NKQYDTVVS 102
            SP M +FTIL+  L +                                    ++ D+ + 
Sbjct: 874  SPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALE 933

Query: 103  LFKRLNSNG-LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
            LFK +  +G   PD+F  + +++ L K G    A  ++  ++    +PN VT++ L++GL
Sbjct: 934  LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGL 993

Query: 162  CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
            C  G++ EA  L +++    C PN+VT+NT+I+G C+      A  L EEMV+     C+
Sbjct: 994  CKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD---GGCQ 1050

Query: 222  PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
            P+VVTY  ++D  CK G  + A  L+  M ++   PN+ TYNSL+  FC  D+ + A  L
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110

Query: 282  FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
               M+  G  P+VV++N +I   CK  K+ +   LLE M+     PD VT+N+++D  C 
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170

Query: 342  VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVI 400
              R+  A ELF  +   GC  ++ +YN L++  CK ++ + A  L REM  ++   P +I
Sbjct: 1171 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 1230

Query: 401  TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            TYNT++ GL +   +  A KL  +M  + + PD  T++  I  LCK  F+ EA  V + +
Sbjct: 1231 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 1290

Query: 461  RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                 +    TY  LI+G CK G L  A ++   L  KG  PDVVT S  I WL K G++
Sbjct: 1291 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 1350

Query: 521  DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
             +A +LL  M     VP  VT+ TLL+GF   +     V L   M        + + ++ 
Sbjct: 1351 RQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTL 1410

Query: 581  VVDLLSKDKKYRECLNQ 597
            V  L+ K K Y++ L +
Sbjct: 1411 VGHLVDK-KSYKDLLAE 1426



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 170/526 (32%), Positives = 275/526 (52%), Gaps = 20/526 (3%)

Query: 79   PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
            P + +++ ++  L K+ + D    L + + S G  P++   + L++ LCK G    A  +
Sbjct: 946  PDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 1005

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            L R+ RS  +PN VT+N +I+G C  GRI EA  L +++    C PNVVT+  L++  C+
Sbjct: 1006 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 1065

Query: 199  TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                  A+ L E MV E G +  P++ TYNS++D  CK   V++A +LL  M  +   PN
Sbjct: 1066 CGKAEDAIGLVEVMV-EKGYV--PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 1122

Query: 259  VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            V++YN++I G C      E   L  +M+ N   PD+VTFN +I+  CK  ++D    L  
Sbjct: 1123 VVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN 1182

Query: 319  LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-GCRHDVYSYNILINANCKD 377
            L+ + G  P+ VTYNSL+ G C   R  +A  L   M  K GC  D+ +YN +I+  CK 
Sbjct: 1183 LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKS 1242

Query: 378  QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            ++V+ A  L+ +MLS+ + P  +TY+ ++S L +   + +A  +++ M  N   P + T+
Sbjct: 1243 KRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITY 1302

Query: 438  ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
             T IDG CK G + +A+++ Q + +      + T++  I+ L K GRL+ A +L   +  
Sbjct: 1303 GTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR 1362

Query: 498  KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN---- 553
             G +PD VT +T++   C     + A DL   M    C P   T+ TL+   V       
Sbjct: 1363 AGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKD 1422

Query: 554  ---KKSKVVV---------LLHKMAAEKLVVSDLSLSSKVVDLLSK 587
               + SK +V         L  K+ A   V +D+ L   +VD+  K
Sbjct: 1423 LLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGK 1468



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/502 (30%), Positives = 256/502 (50%), Gaps = 25/502 (4%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +EA +  + M+     P + ++T+LL    K  + +  + L + +   G  P+LF  N L
Sbjct: 1035 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSL 1094

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            ++  CK      A  +L  +++    PN V++N +I GLC   ++ E   L +++    C
Sbjct: 1095 LDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNC 1154

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             P++VTFNT+I+ +C+T    +A +LF  ++ E G  C P++VTYNS++ GLCK    D+
Sbjct: 1155 VPDIVTFNTIIDAMCKTYRVDIAYELF-NLIQESG--CTPNLVTYNSLVHGLCKSRRFDQ 1211

Query: 243  AKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A+ LL +M + +  +P++ITYN++I G C       A  LF++M+ +G+ PD VT++ +I
Sbjct: 1212 AEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVI 1271

Query: 302  NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
            +  CK   MD+ N +LELM++ G +P  +TY +L+DGFC  G + +A E+   ++SKG  
Sbjct: 1272 SSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSY 1331

Query: 362  HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             DV +++I I+   K  ++  A  L   ML   + P  +TYNTLL G        DA+ L
Sbjct: 1332 PDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDL 1391

Query: 422  IDKMQLNDVVPDSFTFATYIDGL-----------------CKNGFVLEAVQVFQAIRNCK 464
             + M+     PD+ T+ T +  L                    GF L      +   + +
Sbjct: 1392 FEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIE 1451

Query: 465  CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
             E  +     +++   K G  + A K+F  +  +    +VV  S M+       Q ++A 
Sbjct: 1452 VEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAF 1507

Query: 525  DLLLDMEAKNCVPSEVTFCTLL 546
             L   M  +   P  VTF +LL
Sbjct: 1508 GLWRVMGLEGVEPDAVTFLSLL 1529



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 219/419 (52%), Gaps = 6/419 (1%)

Query: 185  NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
            +  T N L+  L R +    AL+++   +      C P++ T+  +I GLC+ G +  A 
Sbjct: 843  DTYTCNCLLQALLRLKRPKDALQVYRNKL-----CCSPNMFTFTILIHGLCRAGDIGTAY 897

Query: 245  ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV-QPDVVTFNAMINY 303
            ELL +M    +  NVI +N +I G C       A  LF EM ++G   PDV T++ +++ 
Sbjct: 898  ELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDS 957

Query: 304  NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
              K GK+D   RL+E M+ +G +P+ VTY+SL+ G C  G++  A  L   M   GC  +
Sbjct: 958  LVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 1017

Query: 364  VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            + +YN +I+ +CK  ++++A  L  EM+    +P+V+TY  LL    + G   DA+ L++
Sbjct: 1018 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 1077

Query: 424  KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
             M     VP+ FT+ + +D  CK   V  A Q+  ++    C   + +YN +I GLCK  
Sbjct: 1078 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 1137

Query: 484  RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            ++     L  ++     +PD+VT +T+I  +CK  ++D A +L   ++   C P+ VT+ 
Sbjct: 1138 KVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYN 1197

Query: 544  TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +L+ G  ++ +  +   LL +M  ++    D+   + V+D L K K+       F  +L
Sbjct: 1198 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQML 1256



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 217/425 (51%), Gaps = 6/425 (1%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            K+G +  +EA      M +   SP + ++  ++    K  + D    L + +   G  P+
Sbjct: 995  KAGKL--DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +    +L++  CK G    A  ++  ++   + PN  T+N L++  C +  +  A +L  
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
             +    C PNVV++NT+I GLC+       + L E+M++     C PD+VT+N+IID +C
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN---CVPDIVTFNTIIDAMC 1169

Query: 236  KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM-DNGVQPDV 294
            K   VD A EL   +++    PN++TYNSL+ G C    + +A+ L  EM    G  PD+
Sbjct: 1170 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 1229

Query: 295  VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            +T+N +I+  CK  ++D+  +L   M+  G+ PD VTY+ ++   C    +  A  +   
Sbjct: 1230 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL 1289

Query: 355  MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
            M+  G      +Y  LI+  CK   ++ A+ + + +LS+   P V+T++  +  L + G 
Sbjct: 1290 MLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGR 1349

Query: 415  LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
            L  A +L++ M    +VPD+ T+ T + G C      +AV +F+ +R C CE    TY  
Sbjct: 1350 LRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTT 1409

Query: 475  LINGL 479
            L+  L
Sbjct: 1410 LVGHL 1414



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 229/481 (47%), Gaps = 23/481 (4%)

Query: 62   SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            + +A+   + M++    P + ++  LL M  K  + +    L   +   G  P++   N 
Sbjct: 1069 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 1128

Query: 122  LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            +I  LCK        ++L ++L +   P+ VTFN +I+ +C   R+  A  LF  +    
Sbjct: 1129 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 1188

Query: 182  CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            C PN+VT+N+L++GLC++R    A  L  EM  + G  C PD++TYN++IDGLCK   VD
Sbjct: 1189 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG--CSPDIITYNTVIDGLCKSKRVD 1246

Query: 242  KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            +A +L LQM    + P+ +TY+ +I   C      EA  +   M+ NG  P  +T+  +I
Sbjct: 1247 RAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 1306

Query: 302  NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
            +  CK G +DK   +L+L++ +G  PD VT++  +D     GR+ +A EL  +M+  G  
Sbjct: 1307 DGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLV 1366

Query: 362  HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             D  +YN L+   C     EDAV L+  M      P   TY TL+  L    +  D L  
Sbjct: 1367 PDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAE 1426

Query: 422  IDKMQLN-----------------DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            + K  ++                 +V  D       +D   K G   +A +VF+ +    
Sbjct: 1427 VSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMD--- 1483

Query: 465  CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
             +  +  ++ ++       + + A  L+  +  +G  PD VT  +++   C  G +D A 
Sbjct: 1484 -QRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAV 1542

Query: 525  D 525
            D
Sbjct: 1543 D 1543



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 163/348 (46%), Gaps = 43/348 (12%)

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           +W E +        +G Q ++   N ++N   K  +  + + L    I+     DTVTY+
Sbjct: 114 EWAETR--------DGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYS 165

Query: 334 SLMDGFCLVGRISRARELFVSM----------------------------------VSKG 359
           +L+ GF   G+I  A ELF  M                                  +SK 
Sbjct: 166 TLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT 225

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  D  +YN +IN   K  +++DA+ L  EM+     P+V +YNT+L G  +   + +AL
Sbjct: 226 CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL 285

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L+++M      PD  ++ T I+GLCK   V EA +V   +    C+  + TY  L++G 
Sbjct: 286 WLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 345

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C++G L  A +L  ++  +G  P+ +T + ++H  C+   M++A+ +L  M    C P  
Sbjct: 346 CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDA 405

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           + + T++ GF +  K  +   LL +M   +    D++  S ++D L K
Sbjct: 406 INYSTIISGFCKAGKLREAHDLLEQM-IRRGCRPDVACLSTLIDALCK 452



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 178/414 (42%), Gaps = 62/414 (14%)

Query: 63   NEAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            ++A Y    M + +  SP + ++  ++  L K+K+ D    LF ++ S+GL PD    ++
Sbjct: 1210 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 1269

Query: 122  LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            +I+ LCK      A  VL  +L++ F P  +T+  LI+G C  G + +A  + + L    
Sbjct: 1270 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 1329

Query: 182  CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              P+VVTF+  I+ L +      A +L E M+    A   PD VTYN+++ G C     +
Sbjct: 1330 SYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR---AGLVPDTVTYNTLLKGFCDASLTE 1386

Query: 242  KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE----MMDNG-------- 289
             A +L   M+     P+  TY +L+       D K  K L  E    M+D G        
Sbjct: 1387 DAVDLFEVMRQCGCEPDNATYTTLVGHLV---DKKSYKDLLAEVSKSMVDTGFKLNHELS 1443

Query: 290  --------VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR------------------ 323
                    V+ DV    A+++   K G      ++ E M QR                  
Sbjct: 1444 SKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQE 1503

Query: 324  -------------GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-GCRHDVYSYNI 369
                         GV PD VT+ SL+   C  G +  A + FVS+    G    V  ++ 
Sbjct: 1504 EQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSC 1563

Query: 370  LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            +I+   +   V +A  L   ML    +PS  T+N LLS     G+   AL++ +
Sbjct: 1564 VIDLLGRLGLVNEAEDL---MLGMPCKPSAATWNCLLSAYKICGDFERALRVAE 1614


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 160/508 (31%), Positives = 267/508 (52%), Gaps = 41/508 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E   F + M+     P +   T L+    +  +      + + L  +G  PD+   N++I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMI 179

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G  + A  VL R+     +P+ VT+N ++  LC  G++ +A  +  ++    C 
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V+T+  LI   CR      A+KL +EM +     C PDVVTYN +++G+CK+G +D+A
Sbjct: 237 PDVITYTILIEATCRDSGVGQAMKLLDEMRDRG---CTPDVVTYNVLVNGICKEGRLDEA 293

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            + L  M      PNVIT+N ++   C    W +A+ L  +M+  G  P VVTFN +IN+
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G + +   +LE M + G  P++++YN L+ GFC   ++ RA E    MVS+GC  D
Sbjct: 354 LCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +YN ++ A CKD KVEDAV +  ++ S+   P +ITYNT++ GL + G  G A+KL+D
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+  D+ PD+ T+++ + GL + G V EA++ F                          
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE------------------------ 509

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
                   F R+   G  P+ VT ++++  LCK  Q D+A D L+ M  + C P+E ++ 
Sbjct: 510 --------FERM---GVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYT 558

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            L+ G        + + LL+++  + L+
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 227/420 (54%), Gaps = 6/420 (1%)

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
           S F    V  N  +  L   G + E  +  + +      P+++   TLI G CR   T  
Sbjct: 96  SSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRK 155

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A K+ E ++   GA+  PDV+TYN +I G CK G ++ A  +L +M   +++P+V+TYN+
Sbjct: 156 AAKILE-VLEGSGAV--PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNT 209

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           ++   C     K+A  +   M+     PDV+T+  +I   C+D  + +  +LL+ M  RG
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRG 269

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD VTYN L++G C  GR+  A +    M S GC+ +V ++NI++ + C   +  DA 
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L  +ML +   PSV+T+N L++ L + G LG A+ +++KM  +   P+S ++   + G 
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGF 389

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           CK   +  A++  + + +  C   I TYN ++  LCK G+++ A ++ ++L  KG  P +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +T +T+I  L K G+  KA  LL +M AK+  P  +T+ +L+ G  +  K  + +   H+
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 215/414 (51%), Gaps = 7/414 (1%)

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           V  N  +  L RT       K  E MV        PD++   ++I G C+ G   KA ++
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNV---PDIIPCTTLIRGFCRMGKTRKAAKI 159

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L  ++     P+VITYN +I G+C   +   A  +   M    V PDVVT+N ++   C 
Sbjct: 160 LEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCD 216

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            GK+ +   +L+ M+QR   PD +TY  L++  C    + +A +L   M  +GC  DV +
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVT 276

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN+L+N  CK+ ++++A+    +M S   +P+VIT+N +L  +   G   DA KL+  M 
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                P   TF   I+ LC+ G +  A+ + + +    C+    +YN L++G CK  ++ 
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMD 396

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +   R+  +G  PD+VT +TM+  LCK+G+++ A ++L  + +K C P  +T+ T++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRH 600
            G  +  K  K + LL +M A+ L    ++ SS +V  LS++ K  E +  F  
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS-LVGGLSREGKVDEAIKFFHE 509



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 206/407 (50%), Gaps = 8/407 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G I  N A+   D   +M  SP + ++  +L  L  + +    + +  R+     +PD
Sbjct: 184 KAGEI--NNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD 238

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +    +LI   C+      A  +L  +     TP+ VT+N L+NG+C EGR+ EA +   
Sbjct: 239 VITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +    C PNV+T N ++  +C T   + A KL  +M+ +  +   P VVT+N +I+ LC
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS---PSVVTFNILINFLC 355

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           + G + +A ++L +M      PN ++YN L+ GFC       A      M+  G  PD+V
Sbjct: 356 RKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N M+   CKDGK++    +L  +  +G +P  +TYN+++DG    G+  +A +L   M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            +K  + D  +Y+ L+    ++ KV++A+  + E     +RP+ +T+N+++ GL +    
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQT 535

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
             A+  +  M      P   ++   I+GL   G   EA+++   + N
Sbjct: 536 DRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCN 582



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 41/269 (15%)

Query: 330 VTYNSLMDGFCLV----------------GRISRA-------------RELFVSMVSK-- 358
           V+ +S  +GFCL+                GR +R+             R + VS  S+  
Sbjct: 5   VSTSSAQEGFCLIQQFHRECKRGNKLDVSGRTTRSISSKVPLWSRKRNRLVLVSAASQVE 64

Query: 359 --GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G       ++ L + +                + E +       N  L  L + G L 
Sbjct: 65  SSGLNGRAQKFDTLASGHSNSNGNGHFSSANSSFVLEDVES-----NNHLRQLVRTGELE 119

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +  K ++ M  +  VPD     T I G C+ G   +A ++ + +        + TYN +I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMI 179

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G CK G +  A  +  R+      PDVVT +T++  LC  G++ +A ++L  M  ++C 
Sbjct: 180 SGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           P  +T+  L+    +++   + + LL +M
Sbjct: 237 PDVITYTILIEATCRDSGVGQAMKLLDEM 265


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 173/509 (33%), Positives = 277/509 (54%), Gaps = 49/509 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ +++  P+P    F  +L  L K+K Y TV+SL +++   G+ P+LF  N+L
Sbjct: 68  DDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNIL 127

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I C C++G            L  C                   +I +A     KL     
Sbjct: 128 IYCFCQLG------------LIPC-------------------QIHQAFLFHDKLVALGF 156

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + V++ TLI+GLC+   T  AL L + +    G + + + V YN++I G+CKD  V+ 
Sbjct: 157 HLDQVSYGTLIHGLCKVGETRAALDLLQRVD---GKLVQLNAVMYNTVIYGMCKDKHVND 213

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M  + I+PNV+TY++LI GF  V   K+A  LF +++   ++PD  TFN +++
Sbjct: 214 AFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVD 273

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CKD KM +   +  +M+++G+ PD VTYNSLMDG+CLV  ++ A+ +F +M   G   
Sbjct: 274 GFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNP 333

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ SYNILIN  CK +KV+ A+ L+ EM  + I P+V+TYN+L+ GL + G +  AL+L+
Sbjct: 334 DIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLV 393

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M    V P+  T+ + ID L K   V +A+ +    ++   +  + TY  LI+GLCK+
Sbjct: 394 DQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV 453

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
                          +G    V T + MIH  CK+G  D+A  LL  M+  +C+P+ VT+
Sbjct: 454 ---------------EGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTY 498

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
              +R  + NN+  K   L  +M    L+
Sbjct: 499 EITIRSLLDNNENDKAEKLFREMITRGLL 527



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 207/412 (50%), Gaps = 18/412 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  F D ++ +       S+  L+  L K  +    + L +R++   +  +  + N +
Sbjct: 142 HQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTV 201

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  +CK    + AF +   ++    +PN VT++ LI+G    G++ +A  LF K+ +   
Sbjct: 202 IYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENI 261

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  TFN L++G C+ R       +F  M+ + G I  PDVVTYNS++DG C    V+ 
Sbjct: 262 KPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQ-GII--PDVVTYNSLMDGYCLVKEVNT 318

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK +   M    +NP++ +YN LI GFC +    +A  LF EM    + P+VVT+N++I+
Sbjct: 319 AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLID 378

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G++    +L++ M  RGV P+ +TYNS++D      ++ +A  L      +G + 
Sbjct: 379 GLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQP 438

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            +Y+Y ILI+  CK                E    +V TYN ++ G  + G   +AL L+
Sbjct: 439 SMYTYTILIDGLCK---------------VEGYDITVNTYNVMIHGFCKKGLFDEALSLL 483

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
            KM+ +  +P++ T+   I  L  N    +A ++F+ +       R  +Y C
Sbjct: 484 SKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYPC 535



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 228/456 (50%), Gaps = 18/456 (3%)

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
            ++L +I    ++  + TF+       +   + +A  LF +L      P    FN ++  
Sbjct: 43  LILLTKINFISYSSTSTTFH-------SNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGS 95

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR-- 253
           L ++++    L L ++M  EF  I KP++   N +I   C+ G +           D+  
Sbjct: 96  LVKSKHYHTVLSLSQKM--EFRGI-KPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLV 152

Query: 254 --NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
               + + ++Y +LI G C V + + A  L   +    VQ + V +N +I   CKD  ++
Sbjct: 153 ALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVN 212

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               L   M+ +G++P+ VTY++L+ GF +VG++  A +LF  ++ +  + D Y++NIL+
Sbjct: 213 DAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILV 272

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CKD+K+++   ++  M+ + I P V+TYN+L+ G   V  +  A  + + M    V 
Sbjct: 273 DGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVN 332

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD  ++   I+G CK   V +A+ +F  +        + TYN LI+GL K GR+  A +L
Sbjct: 333 PDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQL 392

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
             ++  +G  P+++T +++I  L K  Q+DKA  L+   + +   PS  T+  L+ G  +
Sbjct: 393 VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 452

Query: 552 NNKKSKVV----VLLHKMAAEKLVVSDLSLSSKVVD 583
                  V    V++H    + L    LSL SK+ D
Sbjct: 453 VEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKD 488



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 158/326 (48%), Gaps = 24/326 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  F+ +I     P   +F IL+    K+++     ++F  +   G+ PD+   N L+
Sbjct: 248 DAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLM 307

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C +   + A  +   + +    P+  ++N LING C   ++ +A  LF +++     
Sbjct: 308 DGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNII 367

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNVVT+N+LI+GL ++     AL+L ++M ++ G    P+++TYNSIID L K   VDKA
Sbjct: 368 PNVVTYNSLIDGLSKSGRISYALQLVDQM-HDRGV--PPNILTYNSIIDALFKTHQVDKA 424

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L+ + KD+ I P++ TY  LI G C V+               G    V T+N MI+ 
Sbjct: 425 IALITKFKDQGIQPSMYTYTILIDGLCKVE---------------GYDITVNTYNVMIHG 469

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G  D+   LL  M      P+ VTY   +          +A +LF  M+++G  + 
Sbjct: 470 FCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNR 529

Query: 364 VYSYNILINANCKDQKVEDAVCLYRE 389
             SY       C   K+  ++ + + 
Sbjct: 530 SASY------PCSSMKIHQSLTMVQH 549


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  291 bits (745), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 154/494 (31%), Positives = 270/494 (54%), Gaps = 6/494 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFK-RLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           S  +  + I+L  L +  +    + +F+  +  +G+ P +   N +IN LCK        
Sbjct: 42  SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGM 101

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +   +++    P+ VT+N LI+ LC  G + EA RL   ++   C PNVVT++ LINGL
Sbjct: 102 ELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-- 254
           C+      A +L +EM  +   +  P+++TYNS +DGLCK     +A EL+  ++D +  
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVL-PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 220

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           ++P+ +T+++LI G C      EA     +M+  G  P+VVT+NA++N  CK  KM++ +
Sbjct: 221 VSPDTVTFSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAH 278

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            ++E M+ +GV PD +TY+ L+D FC   R+  A EL   M S+GC  +V ++N +I+  
Sbjct: 279 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 338

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK  +  +A  +  ++ +  + P  +T+N L++G  + GN   A  L ++M   ++ PD 
Sbjct: 339 CKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDV 398

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            TF   IDGLCK G V  A  +   + N      + TYN L++GLCK GR++  C+    
Sbjct: 399 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEE 458

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +   G +P+ +T  ++++ LC+  + D A  L+  +++    P  VT+  L+ G  ++ K
Sbjct: 459 MVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGK 518

Query: 555 KSKVVVLLHKMAAE 568
             + + +L +M  +
Sbjct: 519 TEQAITVLEEMVGK 532



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/515 (31%), Positives = 273/515 (53%), Gaps = 8/515 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M +   +P + ++  ++  L K+ +    + LF+ L   G  PD+   N LI+ LCK G 
Sbjct: 72  MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGD 131

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD--PNVVTF 189
              A  + G +      PN VT++ LINGLC  GRI EA  L +++   +CD  PN++T+
Sbjct: 132 LEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 191

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           N+ ++GLC+   T  A +L   + +  G++   PD VT++++IDGLCK G  D+A     
Sbjct: 192 NSFLDGLCKQSMTAEACELMRSLRD--GSLRVSPDTVTFSTLIDGLCKCGQTDEACND-- 247

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M      PNV+TYN+L+ G C  D  + A  +   M+D GV PDV+T++ +++  CK  
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 307

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++D+   LL  M  RG  P+ VT+NS++DG C   R   A ++ + + ++    D  ++N
Sbjct: 308 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFN 367

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           ILI   CK    E A  L+ EM+++ ++P V+T+  L+ GL + G +  A  ++D M   
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V P+  T+   + GLCK+G + E  +  + + +  C     TY  L+  LC+  R   A
Sbjct: 428 GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDA 487

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +L  +L+  G  PD VT + ++  L K G+ ++A  +L +M  K   P   TF     G
Sbjct: 488 LQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGG 547

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             ++   +  + LL  + A K ++ D +  S ++D
Sbjct: 548 LHRSGNLAGTMELLRVVLA-KGMLPDATTCSSILD 581



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 149/490 (30%), Positives = 245/490 (50%), Gaps = 43/490 (8%)

Query: 62  SNE---AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           SNE    +  F+ ++K    P + ++  L+  L K    +    L   ++S G  P++  
Sbjct: 94  SNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVT 153

Query: 119 LNLLINCLCKMGITSGAFVVLGRILR-SC-FTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            ++LIN LCK+G    A  ++  + R SC   PN +T+N  ++GLC +    EA  L + 
Sbjct: 154 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 213

Query: 177 LN-----------VF---------------ACD---------PNVVTFNTLINGLCRTRN 201
           L             F               AC+         PNVVT+N L+NGLC+   
Sbjct: 214 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADK 273

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A  + E MV++      PDV+TY+ ++D  CK   VD+A ELL  M  R   PNV+T
Sbjct: 274 MERAHAMIESMVDKG---VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 330

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +NS+I G C  D   EA  + +++ +  + PD VTFN +I   CK G  ++ + L E M+
Sbjct: 331 FNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMV 390

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            + + PD +T+ +L+DG C  G++  AR++   M + G   +V +YN+L++  CK  ++E
Sbjct: 391 AKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIE 450

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           +      EM+S    P  +TY +L+  L +     DAL+L+ K++     PD+ T+   +
Sbjct: 451 EPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILV 510

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGL K+G   +A+ V + +     +    T+     GL + G L    +L   +  KG +
Sbjct: 511 DGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGML 570

Query: 502 PDVVTCSTMI 511
           PD  TCS+++
Sbjct: 571 PDATTCSSIL 580



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/436 (33%), Positives = 226/436 (51%), Gaps = 10/436 (2%)

Query: 154 FNFLINGLCAEGRIMEAARLFK-KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           +N ++  LC  G    A  +F+ ++      P +VT+NT+INGLC++      ++LFEE+
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           V        PDVVTYN++ID LCK G +++A+ L   M  R   PNV+TY+ LI G C V
Sbjct: 108 VKRGH---HPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164

Query: 273 DDWKEAKCLFIEMMDNG--VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG--VNPD 328
               EA+ L  EM      V P+++T+N+ ++  CK     +   L+  +      V+PD
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 224

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           TVT+++L+DG C  G+   A      M++ G   +V +YN L+N  CK  K+E A  +  
Sbjct: 225 TVTFSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIE 282

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+ + + P VITY+ L+    +   + +AL+L+  M      P+  TF + IDGLCK+ 
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 342

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
              EA Q+   + N        T+N LI G CK G  + A  LF  +  K   PDV+T  
Sbjct: 343 RSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFG 402

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +I  LCK GQ++ A D+L  M      P+ VT+  L+ G  ++ +  +    L +M + 
Sbjct: 403 ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSS 462

Query: 569 KLVVSDLSLSSKVVDL 584
             V   ++  S V  L
Sbjct: 463 GCVPESMTYGSLVYAL 478



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 174/310 (56%), Gaps = 18/310 (5%)

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLEL----MIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           V  +N ++   C+ G+     R LE+    M + GV P  VTYN++++G C    +    
Sbjct: 45  VADYNIVLQSLCRAGE---TARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGM 101

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           ELF  +V +G   DV +YN LI++ CK   +E+A  L+  M S    P+V+TY+ L++GL
Sbjct: 102 ELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161

Query: 410 FQVGNLGDALKLIDKMQLN--DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
            +VG + +A +LI +M     DV+P+  T+ +++DGLCK     EA ++ +++R+    L
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS--L 219

Query: 468 RIE----TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           R+     T++ LI+GLCK G+   AC     +   G +P+VVT + +++ LCK  +M++A
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERA 277

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           + ++  M  K   P  +T+  L+  F + ++  + + LLH MA+     + ++ +S ++D
Sbjct: 278 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS-IID 336

Query: 584 LLSKDKKYRE 593
            L K  +  E
Sbjct: 337 GLCKSDRSGE 346



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 154/308 (50%), Gaps = 3/308 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A    + M+    +P + ++++L+    K  + D  + L   + S G  P++   N +I+
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 336

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK   +  AF +  ++      P+ VTFN LI G C  G   +A+ LF+++      P
Sbjct: 337 GLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQP 396

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V+TF  LI+GLC+      A  + + M N  G    P+VVTYN ++ GLCK G +++  
Sbjct: 397 DVMTFGALIDGLCKAGQVEAARDILDLMGN-LGV--PPNVVTYNVLVHGLCKSGRIEEPC 453

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E L +M      P  +TY SL+   C      +A  L  ++   G  PD VT+N +++  
Sbjct: 454 EFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGL 513

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K GK ++   +LE M+ +G  PD+ T+ +   G    G ++   EL   +++KG   D 
Sbjct: 514 WKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDA 573

Query: 365 YSYNILIN 372
            + + +++
Sbjct: 574 TTCSSILD 581



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 145/287 (50%), Gaps = 12/287 (4%)

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS-MVSKGCRHDVYSYNILINANC 375
           L+    R  +     YN ++   C  G  +RA E+F   M   G    + +YN +IN  C
Sbjct: 33  LKFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLC 92

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K  ++   + L+ E++     P V+TYNTL+  L + G+L +A +L   M     VP+  
Sbjct: 93  KSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVV 152

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL--RIETYNCLINGLCKMGRLKTACKLFH 493
           T++  I+GLCK G + EA ++ Q +    C++   I TYN  ++GLCK      AC+L  
Sbjct: 153 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 212

Query: 494 RLQHKGPI---PDVVTCSTMIHWLCKEGQMDKA-NDLLLDMEAKNCVPSEVTFCTLLRGF 549
            L+  G +   PD VT ST+I  LCK GQ D+A ND   DM A   VP+ VT+  L+ G 
Sbjct: 213 SLR-DGSLRVSPDTVTFSTLIDGLCKCGQTDEACND---DMIAGGYVPNVVTYNALVNGL 268

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
            + +K  +   ++  M  +K V  D+   S +VD   K  +  E L 
Sbjct: 269 CKADKMERAHAMIESM-VDKGVTPDVITYSVLVDAFCKASRVDEALE 314



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 3/275 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+     M     +P + +F  ++  L K+ +      +  ++ +  L PD    N+L
Sbjct: 310 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNIL 369

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   CK G    A  +   ++     P+ +TF  LI+GLC  G++  A  +   +     
Sbjct: 370 IAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 429

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVVT+N L++GLC++       +  EEMV+   + C P+ +TY S++  LC+    D 
Sbjct: 430 PPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVS---SGCVPESMTYGSLVYALCRASRTDD 486

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L+ ++K    +P+ +TYN L+ G       ++A  +  EM+  G QPD  TF A   
Sbjct: 487 ALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFG 546

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
              + G +     LL +++ +G+ PD  T +S++D
Sbjct: 547 GLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 5/211 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN    +A   F+ M+     P + +F  L+  L K  Q +    +   + + G+ P+
Sbjct: 375 KAGNF--EQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 432

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N+L++ LCK G        L  ++ S   P ++T+  L+  LC   R  +A +L  
Sbjct: 433 VVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVS 492

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           KL  F  DP+ VT+N L++GL ++  T  A+ + EEMV   G   +PD  T+ +   GL 
Sbjct: 493 KLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV---GKGHQPDSFTFAACFGGLH 549

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           + G +    ELL  +  + + P+  T +S++
Sbjct: 550 RSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 172/581 (29%), Positives = 304/581 (52%), Gaps = 37/581 (6%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           S +  ++   K G +  ++A + FD MI     P + +++ L+  L K +  +   ++ +
Sbjct: 205 SYSTIIDGFFKEGEV--DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQ 262

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            +   G+ P+    N++I   C +G    A  +L ++  S   P+ VT+  LI   C  G
Sbjct: 263 HMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIG 322

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK-LFEEMVNE--------- 215
           R  EA  +F  +      PN   ++ L++G   T+  L+ ++ L + M+ +         
Sbjct: 323 RCAEARSVFDSMVRKGQKPNSTIYHILLHGYA-TKGALIDVRDLLDLMIRDGIPFEHRAF 381

Query: 216 ---------FGAICK--------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
                     GA+ K              PDVV+Y+++I  LCK G V+ A     QM  
Sbjct: 382 NILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVS 441

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
             ++PN+I++ SLI G C + +WK+ + L  EM++ G+ PD +  N +++  CK+G++ +
Sbjct: 442 EGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVE 501

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
                +++I  GV P+ V+YN+L+DG+C VG++  + + F  MVS G R D ++YN L+N
Sbjct: 502 AQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLN 561

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
              K+ +VEDA+ LYREM  + ++   IT N +L GLFQ G +  A +L  KM       
Sbjct: 562 GYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQL 621

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
              T+ T + GLC+N  V EA+++F+ +R+ + EL + T+N +IN L K+GR+  A  LF
Sbjct: 622 RIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLF 681

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +  +GP+P V+T S MI    +EG +++++DL L ME   C         ++R  ++ 
Sbjct: 682 SAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEK 741

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
               +    L K+  +   V + S ++ ++ ++S+ K  +E
Sbjct: 742 GDVRRAGTYLTKIDEKNFSV-EASTAALLIPIVSEKKYQKE 781



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 268/515 (52%), Gaps = 11/515 (2%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT------ 99
            + + + +RH+SG++   +A+  FD ++       + +F  +LT++A+     +      
Sbjct: 14  ELERIILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAA 73

Query: 100 -VVSLFKRLNSNG---LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
             VSLF  +  +G   +  + +++ +LI C C +G    AF      L+  +    VT N
Sbjct: 74  LAVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLN 133

Query: 156 FLINGLCAEGRIMEAARL-FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
            LI GLC   R  +A  + F+++      P+V ++N LI GLC  + +  AL+L   M  
Sbjct: 134 QLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTA 193

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
           + G  C P+VV+Y++IIDG  K+G VDKA  L  +M  +   P+V+TY+SLI G C    
Sbjct: 194 DGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQA 253

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
             +A+ +   M D GV P+  T+N MI   C  G++++  RLL+ M   G+ PD VTY  
Sbjct: 254 MNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYIL 313

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L+  +C +GR + AR +F SMV KG + +   Y+IL++       + D   L   M+ + 
Sbjct: 314 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 373

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I      +N L+    + G +  A+    +M+ N + PD  +++T I  LCK G V +AV
Sbjct: 374 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAV 433

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
             F  + +      I ++  LI+GLC +G  K   +L   + ++G  PD +  +T++  L
Sbjct: 434 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 493

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           CKEG++ +A D    +      P+ V++ TL+ G+
Sbjct: 494 CKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGY 528



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 17/278 (6%)

Query: 308 GKMDKVNRLLELMIQRGVNPDTV-TYNSLMDGFCLVGRISRARE---LFVSMVSKGCRHD 363
           G+ D +N   EL+ Q    P +V  +NS++         S  R    L VS+ +   R  
Sbjct: 29  GREDALNLFDELLPQ--ARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSG 86

Query: 364 V-------YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           V       Y   ILI   C   +++ A   +   L    R   +T N L+ GL       
Sbjct: 87  VNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTD 146

Query: 417 DALKLI-DKMQLNDVVPDSFTFATYIDGLC---KNGFVLEAVQVFQAIRNCKCELRIETY 472
           DA+ ++  +M      PD F++   I GLC   K+   LE +    A     C   + +Y
Sbjct: 147 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSY 206

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           + +I+G  K G +  A  LF  +  +G  PDVVT S++I  LCK   M+KA  +L  M  
Sbjct: 207 STIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFD 266

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           K  +P+  T+  ++RG+    +  + V LL KM+   L
Sbjct: 267 KGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGL 304



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 15/236 (6%)

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD-------ALKLIDKMQ---LNDV 430
           EDA+ L+ E+L +    SV  +N++L+ + +  +          A+ L + M    +N +
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
             + +     I   C  G +  A   F         ++  T N LI GLC   R   A  
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 491 L-FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK---NCVPSEVTFCTLL 546
           + F R+   G  PDV + + +I  LC E +  +A +LLL M A    NC P+ V++ T++
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            GF +  +  K   L  +M  +     D+   S ++D L K +   +     +H+ 
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGF-PPDVVTYSSLIDGLCKAQAMNKAEAILQHMF 265


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/486 (34%), Positives = 264/486 (54%), Gaps = 38/486 (7%)

Query: 54  RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
           R+   N+  NEA+  F  M+  +P P +  FT LL+++AK K++D V+SLF+++   G+ 
Sbjct: 55  RNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGIS 114

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P L+  N+++NC+C+      A   LG++++  F P+ VTF  L++G C   RI +A  L
Sbjct: 115 PVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALAL 174

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           F ++      PNVVT+ TLI+ LC+ R+   A+++F +M +      +P+VVTYNS++ G
Sbjct: 175 FDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNG---IRPNVVTYNSLVSG 231

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LC+ G    A  LL  M  R I PNVIT+ +LI  F  V    EAK L+  M+   V PD
Sbjct: 232 LCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPD 291

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           V T+ A+IN  C  G++D+  ++  LM   G  P+ VTY +L+ GFC   R+    ++F 
Sbjct: 292 VFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFY 351

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M  KG   +  +Y +LI   C   + + A  ++ +M S R  P + TYN LL       
Sbjct: 352 EMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLL------- 404

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
                                       DGLC NG+V +A+ +F+ +R  + ++ I TY 
Sbjct: 405 ----------------------------DGLCYNGYVEKALMIFKYMRKREMDINIVTYT 436

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +I G+CK+G+++ A  LF  L  KG  P+V+T +TMI   C+ G + +A+ L   M+  
Sbjct: 437 IIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKED 496

Query: 534 NCVPSE 539
             +P+E
Sbjct: 497 GFLPNE 502



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 179/366 (48%), Gaps = 3/366 (0%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL LF  MV+       P +V +  ++  + K    D    L  QM+   I+P + T N 
Sbjct: 66  ALDLFTRMVHSRPL---PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           ++   C       A C   +MM  G +PD+VTF ++++  C   +++    L + ++  G
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             P+ VTY +L+   C    ++ A E+F  M   G R +V +YN L++  C+  +  DA 
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L R+M+   I+P+VIT+  L+    +VG + +A +L   M    V PD FT+   I+GL
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G + EA Q+F  + +        TY  LI+G CK  R++   K+F+ +  KG + + 
Sbjct: 303 CTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +T + +I   C  G+ D A ++   M ++   P   T+  LL G   N    K +++   
Sbjct: 363 ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKY 422

Query: 565 MAAEKL 570
           M   ++
Sbjct: 423 MRKREM 428



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 167/326 (51%), Gaps = 2/326 (0%)

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
            + EA  LF  M+ +   P +V F  +++   K  + D V  L E M   G++P   T N
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            +M+  C   +  RA      M+  G   D+ ++  L++  C   ++EDA+ L+ +++  
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             RP+V+TY TL+  L +  +L  A+++ ++M  N + P+  T+ + + GLC+ G   +A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             + + +     +  + T+  LI+   K+G++  A +L+  +      PDV T + +I+ 
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           LC  G++D+A  +   ME+    P+EVT+ TL+ GF ++ +      + ++M+ + LV +
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361

Query: 574 DLSLSSKVVD--LLSKDKKYRECLNQ 597
            ++ +  +    L+ +    +E  NQ
Sbjct: 362 TITYTVLIQGYCLVGRPDVAQEVFNQ 387



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 112/237 (47%), Gaps = 1/237 (0%)

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y  ++     + +  +A+ L+  M+  R  PS++ +  LLS + ++      + L ++M
Sbjct: 49  NYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM 108

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           Q+  + P  +T    ++ +C++     A      +     E  + T+  L++G C   R+
Sbjct: 109 QILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRI 168

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A  LF ++   G  P+VVT +T+IH LCK   ++ A ++   M      P+ VT+ +L
Sbjct: 169 EDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSL 228

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           + G  +  + S    LL  M    +  + ++ ++ ++D   K  K  E    ++ ++
Sbjct: 229 VSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTA-LIDAFVKVGKIMEAKELYKVMI 284


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 183/588 (31%), Positives = 295/588 (50%), Gaps = 39/588 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G++  ++A   +  M+     P + +++ ++  L K +  D  + 
Sbjct: 198 DVVSYTTVINGFFKEGDL--DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ P+    N +++  C  G    A   L ++      P+ VT+N L++ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
             GR  EA ++F  +      P + T+ TL+ G   T+  LV +    +++   G     
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNH 374

Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                 IC                        PD VTY ++I  LCK G V+ A     Q
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  ++P  I YNSLI   C  D W +AK L +EM+D G+  D + FN++I+ +CK+G+
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L +LM++ GV PD +TY++L+DG+CL G++  A +L  SMVS G + D  +YN 
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  CK  ++EDA+ L+REM S  + P +ITYN +L GLFQ      A +L   +  + 
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
              +  T+   + GLCKN    EA+++FQ +     +L   T+N +I  L K+GR   A 
Sbjct: 615 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            LF  L   G +PDV T S M   L ++G +++ +DL L ME   C  +     +++R  
Sbjct: 675 DLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 734

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS--KDKKYRECL 595
           +Q    ++    L  M  EK    + S +S  +DLLS  K ++Y  C+
Sbjct: 735 LQRGDITRAGTYLF-MIDEKHFSLEASTASLFLDLLSGGKYQEYHSCI 781



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 167/562 (29%), Positives = 276/562 (49%), Gaps = 42/562 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           +P + ++ IL+       + D   +    +   G   D      L+  LC    TS A  
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           +VL R+ +    PN  ++N L+ GLC E R  EA  L + +  +   C P+VV++ T+IN
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A   + EM++  G +  P+VVTY+SII  LCK   +DKA E+L  M    
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDR-GIL--PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TYNS++ G+C     KEA     +M  +GV+PDVVT+N++++Y CK+G+  +  
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGF----CLV---------------------------- 342
           ++ + M +RG+ P+  TY +L+ G+     LV                            
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 343 ---GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
              G++ +A  +F  M  +G   D  +Y  +I   CK  +VEDA+  + +M+ ER+ P  
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           I YN+L+  L        A +LI +M    +  D+  F + ID  CK G V+E+ ++F  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +  I TY+ LI+G C  G++  A KL   +   G  PD VT +T+I+  CK  +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           M+ A  L  +ME+    P  +T+  +L+G  Q  +++     L+    E     +LS  +
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQ-TRRTAAAKELYVGITESGTQLELSTYN 623

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            ++  L K+    E L  F++L
Sbjct: 624 IILHGLCKNNLTDEALRMFQNL 645



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 171/353 (48%), Gaps = 6/353 (1%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM-DK 312
            + PN+ TY  LI   CC             ++  G + D + F  ++   C D +  D 
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG--CRHDVYSYNIL 370
           ++ +L  M Q G  P+  +YN L+ G C   R   A EL   M   G  C  DV SY  +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           IN   K+  ++ A   Y EML   I P+V+TY+++++ L +   +  A++++  M  N V
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +P+  T+ + + G C +G   EA+   + + +   E  + TYN L++ LCK GR   A K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLRGF 549
           +F  +  +G  P++ T  T++     +G + + +  LLD+  +N + P+   F  L+  +
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG-LLDLMVRNGIHPNHYVFSILICAY 384

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +  K  + +++  KM  + L    ++  + V+ +L K  +  + +  F  ++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGT-VIGILCKSGRVEDAMRYFEQMI 436



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 42/316 (13%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFN---AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           ++A+ +F E++  G    +   N   A +  +     + + NR+        V P+  TY
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADE-VTPNLCTY 94

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV-CLYREM- 390
             L+   C  GR+        +++ KG R D  ++  L+   C D++  DA+  + R M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 391 -----------------LSERIR-------------------PSVITYNTLLSGLFQVGN 414
                            L +  R                   P V++Y T+++G F+ G+
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L  A     +M    ++P+  T+++ I  LCK   + +A++V  ++          TYN 
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +++G C  G+ K A     ++   G  PDVVT ++++ +LCK G+  +A  +   M  + 
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 535 CVPSEVTFCTLLRGFV 550
             P   T+ TLL+G+ 
Sbjct: 335 LKPEITTYGTLLQGYA 350


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 183/588 (31%), Positives = 295/588 (50%), Gaps = 39/588 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G++  ++A   +  M+     P + +++ ++  L K +  D  + 
Sbjct: 198 DVVSYTTVINGFFKEGDL--DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ P+    N +++  C  G    A   L ++      P+ VT+N L++ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
             GR  EA ++F  +      P + T+ TL+ G   T+  LV +    +++   G     
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNH 374

Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                 IC                        PD VTY ++I  LCK G V+ A     Q
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  ++P  I YNSLI   C  D W +AK L +EM+D G+  D + FN++I+ +CK+G+
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L +LM++ GV PD +TY++L+DG+CL G++  A +L  SMVS G + D  +YN 
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  CK  ++EDA+ L+REM S  + P +ITYN +L GLFQ      A +L   +  + 
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
              +  T+   + GLCKN    EA+++FQ +     +L   T+N +I  L K+GR   A 
Sbjct: 615 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            LF  L   G +PDV T S M   L ++G +++ +DL L ME   C  +     +++R  
Sbjct: 675 DLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 734

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS--KDKKYRECL 595
           +Q    ++    L  M  EK    + S +S  +DLLS  K ++Y  C+
Sbjct: 735 LQRGDITRAGTYLF-MIDEKHFSLEASTASLFLDLLSGGKYQEYHSCI 781



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 167/562 (29%), Positives = 276/562 (49%), Gaps = 42/562 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           +P + ++ IL+       + D   +    +   G   D      L+  LC    TS A  
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           +VL R+ +    PN  ++N L+ GLC E R  EA  L + +  +   C P+VV++ T+IN
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A   + EM++  G +  P+VVTY+SII  LCK   +DKA E+L  M    
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDR-GIL--PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TYNS++ G+C     KEA     +M  +GV+PDVVT+N++++Y CK+G+  +  
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGF----CLV---------------------------- 342
           ++ + M +RG+ P+  TY +L+ G+     LV                            
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 343 ---GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
              G++ +A  +F  M  +G   D  +Y  +I   CK  +VEDA+  + +M+ ER+ P  
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           I YN+L+  L        A +LI +M    +  D+  F + ID  CK G V+E+ ++F  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +  I TY+ LI+G C  G++  A KL   +   G  PD VT +T+I+  CK  +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           M+ A  L  +ME+    P  +T+  +L+G  Q  +++     L+    E     +LS  +
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQ-TRRTAAAKELYVGITESGTQLELSTYN 623

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            ++  L K+    E L  F++L
Sbjct: 624 IILHGLCKNNLTDEALRMFQNL 645



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 171/353 (48%), Gaps = 6/353 (1%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM-DK 312
            + PN+ TY  LI   CC             ++  G + D + F  ++   C D +  D 
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG--CRHDVYSYNIL 370
           ++ +L  M Q G  P+  +YN L+ G C   R   A EL   M   G  C  DV SY  +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           IN   K+  ++ A   Y EML   I P+V+TY+++++ L +   +  A++++  M  N V
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +P+  T+ + + G C +G   EA+   + + +   E  + TYN L++ LCK GR   A K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLRGF 549
           +F  +  +G  P++ T  T++     +G + + +  LLD+  +N + P+   F  L+  +
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG-LLDLMVRNGIHPNHYVFSILICAY 384

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +  K  + +++  KM  + L    ++  + V+ +L K  +  + +  F  ++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGT-VIGILCKSGRVEDAMRYFEQMI 436



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 42/316 (13%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFN---AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           ++A+ +F E++  G    +   N   A +  +     + + NR+        V P+  TY
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADE-VTPNLCTY 94

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV-CLYREM- 390
             L+   C  GR+        +++ KG R D  ++  L+   C D++  DA+  + R M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 391 -----------------LSERIR-------------------PSVITYNTLLSGLFQVGN 414
                            L +  R                   P V++Y T+++G F+ G+
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L  A     +M    ++P+  T+++ I  LCK   + +A++V  ++          TYN 
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +++G C  G+ K A     ++   G  PDVVT ++++ +LCK G+  +A  +   M  + 
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 535 CVPSEVTFCTLLRGFV 550
             P   T+ TLL+G+ 
Sbjct: 335 LKPEITTYGTLLQGYA 350


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 181/561 (32%), Positives = 289/561 (51%), Gaps = 41/561 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV  F   +     P   +   L+  LA+++ Y    S+++R+    + P    L+ LI
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
            C          F V+G +L+  FT N    N ++ GLC  G + EA  L +++   +  
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++V++NTLINGLC+ +    A+ L  EM     A C P+ VT  +++DGLCKDG +D+A
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEME---AAGCFPNSVTCTTLMDGLCKDGRMDEA 233

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ELL  MK +  + +V+ Y +LI GFC   +    K LF EM+  G+  +VVT++ +++ 
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 293

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G+  + N +L  M + G++PD VTY  L+DG C  GR + A +L   MV KG    
Sbjct: 294 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 353

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN+L++  CK+  V DA  + R M+ +  +  V+TYNTL+ GL   G + +ALKL +
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413

Query: 424 KMQLND--VVPDSFTFATYIDGLCKNGFVLEAVQVFQA--------------------IR 461
            M  N+  + P+ FTF   I GLCK G + +AV++ +                     ++
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473

Query: 462 NCKCELRIE---------------TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
             K +  +E               TY+ LI+G CKM  L  A  LF  ++  G  P +  
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 533

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            +T++  LCKEG +++A  L  +M   NC P  ++F T++ G ++      V  L  KM 
Sbjct: 534 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 593

Query: 567 AEKLVVSDLSLSSKVVDLLSK 587
              L    L+ S+ +++ LSK
Sbjct: 594 EMGLRPDALTFST-LINRLSK 613



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 218/430 (50%), Gaps = 34/430 (7%)

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN-----EFGAIC 220
           +  EA  LF     F   P+  T N L++ L R+RN  +A  ++  M +      FG++ 
Sbjct: 54  QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113

Query: 221 ----------KP-----------------DVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
                     KP                 +V   N ++ GLC++G V +A  L+ +M  +
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
           +++P++++YN+LI G C     KEA  L +EM   G  P+ VT   +++  CKDG+MD+ 
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEA 233

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             LLE M ++G + D V Y +L+ GFC  G + R +ELF  M+ KG   +V +Y+ L++ 
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 293

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C+  + ++A  +   M    I P V+TY  L+ GL + G    A+ L++ M      P 
Sbjct: 294 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 353

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           + T+   + GLCK G V++A ++ + +     +  + TYN L+ GLC  G++  A KLF+
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413

Query: 494 RL--QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            +        P+V T + +I  LCKEG++ KA  +   M  K    + VT+  LL G ++
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473

Query: 552 NNKKSKVVVL 561
             K  + + L
Sbjct: 474 AGKIKEAMEL 483



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 217/417 (52%), Gaps = 7/417 (1%)

Query: 44  GTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL 103
           GT I+ F N+    GN+   + +  FD M+    S  + +++ L+  L +  Q+    ++
Sbjct: 253 GTLISGFCNN----GNLDRGKEL--FDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTV 306

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
              +  +G+ PD+     LI+ LCK G  + A  +L  ++     P+ VT+N L++GLC 
Sbjct: 307 LNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 366

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           EG +++A ++ + +       +VVT+NTL+ GLC       ALKLF  M +    + +P+
Sbjct: 367 EGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCL-EPN 425

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V T+N +I GLCK+G + KA ++  +M  +    N++TYN L+ G       KEA  L+ 
Sbjct: 426 VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWK 485

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +++D G  P+  T++ +I+  CK   ++    L   M   G+NP    YN+LM   C  G
Sbjct: 486 QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 545

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            + +A+ LF  M +  C  D+ S+N +I+   K    +    L  +M+   +RP  +T++
Sbjct: 546 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 605

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TL++ L ++G L +A   +++M  +   PD+  + + + GL   G   E + +   +
Sbjct: 606 TLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 662



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 174/350 (49%), Gaps = 5/350 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL--NSNGLFPDLFVLNL 121
           +A      MI+      + ++  L+  L    + D  + LF  +  N N L P++F  N+
Sbjct: 372 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 431

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI  LCK G  + A  +  ++++     N VT+N L+ G    G+I EA  L+K++    
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 491

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN  T++ LI+G C+ R   +A  LF EM         P +  YN+++  LCK+G ++
Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG---LNPALFDYNTLMASLCKEGSLE 548

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +AK L  +M + N  P++I++N++I G     D++  K L ++M++ G++PD +TF+ +I
Sbjct: 549 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 608

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N   K G++D+    LE M+  G  PD + Y+SL+ G    G  +    L   M +KG  
Sbjct: 609 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 668

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
            D    + ++   C   +  D + L           + I+ N LL  L Q
Sbjct: 669 LDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQLHQ 718



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 166/350 (47%), Gaps = 1/350 (0%)

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           D N+ P+  T N L+       ++  A  ++  M    V P   + +A+I       K  
Sbjct: 67  DFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQ 126

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               ++ L+++RG   +    N ++ G C  G +  A  L   M  K    D+ SYN LI
Sbjct: 127 LGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLI 186

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N  CK +K+++AV L  EM +    P+ +T  TL+ GL + G + +A++L++ M+     
Sbjct: 187 NGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFD 246

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            D   + T I G C NG +    ++F  +        + TY+CL++GLC++G+ K A  +
Sbjct: 247 ADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTV 306

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            + +   G  PDVVT + +I  LCK+G+   A DLL  M  K   PS VT+  LL G  +
Sbjct: 307 LNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 366

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                    +L +M  EK   +D+   + ++  L    K  E L  F  +
Sbjct: 367 EGLVIDAFKIL-RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 167/534 (31%), Positives = 286/534 (53%), Gaps = 6/534 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+ ++   E V  F  MI     P   ++  L+       Q++ VV   K ++++ L PD
Sbjct: 377 KAQSVDRAEGV--FQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPD 434

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F   LL++ LCK G  + A  +   ++R    P+   +  +++G   +G + E   L  
Sbjct: 435 VFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLN 494

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      PN   FNT+I    +       + +F +M  +      P+VVTY ++ID LC
Sbjct: 495 LMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG---LSPNVVTYGTLIDALC 551

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G VD A     QM +  + PN + +NSL+ G C VD W++ + LF+EM++ G++PD+V
Sbjct: 552 KLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIV 611

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            FN ++   CK+G++ +  RL++ M+  G+ PD ++YN+L+DG C   R+  A +L   M
Sbjct: 612 FFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGM 671

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           VS G + ++ SYN L++  CK  ++++A CL+REML + + P V TYNT+L+GLF+ G  
Sbjct: 672 VSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRF 731

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A +L   M  +  +    T++  +DG CKN    EA ++FQ++ +   +L I T+N +
Sbjct: 732 SEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIM 791

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+GL K GR + A  LF  +   G +P VVT   +   L +EG +++ + L   ME    
Sbjct: 792 IDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGT 851

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
            P+      L+R  +   +  +    L K+  EK    + S +S ++ L S+++
Sbjct: 852 APNSHMLNALIRKLLDRGEIPRAGAYLSKL-DEKNFSLEASTTSMLISLFSREE 904



 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 174/589 (29%), Positives = 298/589 (50%), Gaps = 45/589 (7%)

Query: 54  RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK---QYDTVVSLFKRLN-- 108
           R +SGN+  ++A+  FD ++       + +   LL+++++ K        VS F R+   
Sbjct: 16  RARSGNLGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRD 75

Query: 109 -SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
            SN + PD    +++I C C++G     F   G IL++ +  + +  N L+ GLC   R+
Sbjct: 76  CSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRV 135

Query: 168 MEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC------ 220
            EA   L +++    C   VV++NTL+ GLC  R    A +L   MV+   + C      
Sbjct: 136 GEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVS 195

Query: 221 --------------------------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
                                      PDVVTYN+IIDGLCK   VD+A+++  QM ++ 
Sbjct: 196 YNIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG 255

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN +TYN++I G C   +   A+ +F +M+D GV+P  VT+N +I+  CK   +D+  
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAE 315

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + MI RGV PD VTYN+++DG C    I +A  +F  M+ KG + D  +Y I+I+  
Sbjct: 316 GVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK Q V+ A  ++++M+ + ++P+  TYN L+ G    G   + ++ I +M  +D+ PD 
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           FT+   +D LCKNG   EA  +F ++     +  +  Y  +++G  K G L     L + 
Sbjct: 436 FTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNL 495

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +   G  P+    +T+I    K   +D+   + + M+ +   P+ VT+ TL+    +  +
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR------ECLNQ 597
               V+  ++M  E +  +++  +S V  L + DK  +      E LNQ
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQ 604



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 251/470 (53%), Gaps = 9/470 (1%)

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRL---NSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           G+ S+  LL  L   ++ +    L   +     +   PD+   N++IN     G    A+
Sbjct: 154 GVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAY 213

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +    L    +P+ VT+N +I+GLC    +  A  +F+++      PN VT+NT+I+GL
Sbjct: 214 SLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGL 270

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+ +   +A  +F++MV++     KP  VTYN+IIDGLCK   VD+A+ +  QM DR + 
Sbjct: 271 CKAQEVDMAEGVFQKMVDKG---VKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVK 327

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+ +TYN++I G C      +A+ +F +M+D GV+PD +T+  +I+  CK   +D+   +
Sbjct: 328 PDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGV 387

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
            + MI +GV P+  TYN L+ G+   G+     +    M +     DV++Y +L++  CK
Sbjct: 388 FQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCK 447

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           + K  +A  L+  M+ + I+PSV  Y  +L G  + G L +   L++ M  N + P+   
Sbjct: 448 NGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRI 507

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           F T I    K   + E + +F  ++       + TY  LI+ LCK+GR+  A   F+++ 
Sbjct: 508 FNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMI 567

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           ++G  P+ V  +++++ LC   + +K  +L L+M  +   P  V F T+L
Sbjct: 568 NEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVL 617



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 157/555 (28%), Positives = 272/555 (49%), Gaps = 73/555 (13%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           +   ++M  SP + ++  ++  L K ++ D    +F+++   G+ P+    N +I+ LCK
Sbjct: 213 YSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCK 272

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
                 A  V  +++     P+ VT+N +I+GLC    +  A  +F+++      P+ VT
Sbjct: 273 AQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVT 332

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +NT+I+GLC+ +    A  +F++M+++     KPD +TY  IIDGLCK   VD+A+ +  
Sbjct: 333 YNTIIDGLCKAQAIDKAEGVFQQMIDKG---VKPDNLTYTIIIDGLCKAQSVDRAEGVFQ 389

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKE------------------------------- 277
           QM D+ + PN  TYN LI G+     W+E                               
Sbjct: 390 QMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNG 449

Query: 278 ----AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI------------ 321
               A+ LF  M+  G++P V  +  M++   K G + +++ LL LM+            
Sbjct: 450 KCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFN 509

Query: 322 -----------------------QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
                                  Q+G++P+ VTY +L+D  C +GR+  A   F  M+++
Sbjct: 510 TVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINE 569

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   +   +N L+   C   K E    L+ EML++ IRP ++ +NT+L  L + G + +A
Sbjct: 570 GVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEA 629

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            +LID M    + PD  ++ T IDG C    + EAV++   + +   +  I +YN L++G
Sbjct: 630 RRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHG 689

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK GR+  A  LF  +  KG  P V T +T+++ L + G+  +A +L ++M     + S
Sbjct: 690 YCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWS 749

Query: 539 EVTFCTLLRGFVQNN 553
             T+  +L GF +NN
Sbjct: 750 ICTYSIILDGFCKNN 764



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 232/464 (50%), Gaps = 3/464 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   FD MI+    P +T + I+L    K      +  L   + +NG+ P+  + N +
Sbjct: 452 NEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTV 511

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I    K  +      +  ++ +   +PN VT+  LI+ LC  GR+ +A   F ++     
Sbjct: 512 ICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGV 571

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN V FN+L+ GLC         +LF EM+N+     +PD+V +N+++  LCK+G V +
Sbjct: 572 TPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG---IRPDIVFFNTVLCNLCKEGRVME 628

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ L+  M    + P+VI+YN+LI G C      EA  L   M+  G++P++V++N +++
Sbjct: 629 ARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLH 688

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++D    L   M+++GV P   TYN++++G    GR S AREL+V+M+      
Sbjct: 689 GYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLW 748

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            + +Y+I+++  CK+   ++A  +++ + S  ++  +IT+N ++ GLF+ G   DA+ L 
Sbjct: 749 SICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLF 808

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             +  N +VP   T+    + L + G + E   +F  +            N LI  L   
Sbjct: 809 AAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDR 868

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           G +  A     +L  K    +  T S +I    +E     A  L
Sbjct: 869 GEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSL 912


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 183/584 (31%), Positives = 293/584 (50%), Gaps = 38/584 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G++  ++A   +  M+     P + +++ ++  L K +  D  + 
Sbjct: 198 DVVSYTTVINGFFKEGDL--DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ P+    N +++  C  G    A   L ++      P+ VT+N L++ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
             GR  EA ++F  +      P + T+ TL+ G   T+  LV +    +++   G     
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNH 374

Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                 IC                        PD VTY ++I  LCK G V+ A     Q
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  ++P  I YNSLI   C  D W +AK L +EM+D G+  D + FN++I+ +CK+G+
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L +LM++ GV PD +TY++L+DG+CL G++  A +L  SMVS G + D  +YN 
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  CK  ++EDA+ L+REM S  + P +ITYN +L GLFQ      A +L   +  + 
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
              +  T+   + GLCKN    EA+++FQ +     +L   T+N +I  L K+GR   A 
Sbjct: 615 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            LF  L   G +PDV T S M   L ++G +++ +DL L ME   C  +     +++R  
Sbjct: 675 DLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 734

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           +Q    ++    L  M  EK    + S +S  +DLLS   KY+E
Sbjct: 735 LQRGDITRAGTYLF-MIDEKHFSLEASTASLFLDLLSG-GKYQE 776



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 165/562 (29%), Positives = 276/562 (49%), Gaps = 42/562 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           +P + ++ IL+       + D   +    +   G   D      ++  LC    TS A  
Sbjct: 88  TPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMD 147

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           +VL R+ +    PN  ++N L+ GLC + R  EA  L + +  +   C P+VV++ T+IN
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A   + EM++  G +  P+VVTY+SII  LCK   +DKA E+L  M    
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDR-GIL--PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TYNS++ G+C     KEA     +M  +GV+PDVVT+N++++Y CK+G+  +  
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGF----CLV---------------------------- 342
           ++ + M +RG+ P+  TY +L+ G+     LV                            
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 343 ---GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
              G++ +A  +F  M  +G   D  +Y  +I   CK  +VEDA+  + +M+ ER+ P  
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           I YN+L+  L        A +LI +M    +  D+  F + ID  CK G V+E+ ++F  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +  I TY+ LI+G C  G++  A KL   +   G  PD VT +T+I+  CK  +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           M+ A  L  +ME+    P  +T+  +L+G  Q  +++     L+    E     +LS  +
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQ-TRRTAAAKELYVGITESGTQLELSTYN 623

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            ++  L K+    E L  F++L
Sbjct: 624 IILHGLCKNNLTDEALRMFQNL 645



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 170/353 (48%), Gaps = 6/353 (1%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM-DK 312
            + PN+ TY  L+   CC             ++  G   D + F  M+   C D +  D 
Sbjct: 86  EVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDA 145

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG--CRHDVYSYNIL 370
           ++ +L  M Q G  P+  +YN L+ G C   R   A EL   M   G  C  DV SY  +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           IN   K+  ++ A   Y EML   I P+V+TY+++++ L +   +  A++++  M  N V
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +P+  T+ + + G C +G   EA+   + + +   E  + TYN L++ LCK GR   A K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLRGF 549
           +F  +  +G  P++ T  T++     +G + + +  LLD+  +N + P+   F  L+  +
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG-LLDLMVRNGIHPNHYVFSILICAY 384

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +  K  + +++  KM  + L    ++  + V+ +L K  +  + +  F  ++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGT-VIGILCKSGRVEDAMRYFEQMI 436



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 141/316 (44%), Gaps = 42/316 (13%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFN---AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           ++A+ +F E++  G    +   N   A +  +     + + NR+        V P+  TY
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADE-VTPNLCTY 94

Query: 333 NSLMDGFCLVGRI-----------------------------------SRARELFV-SMV 356
             LM   C  GR+                                   S A ++ +  M 
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE--RIRPSVITYNTLLSGLFQVGN 414
             GC  +V+SYNIL+   C D + ++A+ L + M  +     P V++Y T+++G F+ G+
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L  A     +M    ++P+  T+++ I  LCK   + +A++V  ++          TYN 
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +++G C  G+ K A     ++   G  PDVVT ++++ +LCK G+  +A  +   M  + 
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 535 CVPSEVTFCTLLRGFV 550
             P   T+ TLL+G+ 
Sbjct: 335 LKPEITTYGTLLQGYA 350


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 183/584 (31%), Positives = 293/584 (50%), Gaps = 38/584 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G++  ++A   +  M+     P + +++ ++  L K +  D  + 
Sbjct: 198 DVVSYTTVINGFFKEGDL--DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ P+    N +++  C  G    A   L ++      P+ VT+N L++ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
             GR  EA ++F  +      P + T+ TL+ G   T+  LV +    +++   G     
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNH 374

Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                 IC                        PD VTY ++I  LCK G V+ A     Q
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  ++P  I YNSLI   C  D W +AK L +EM+D G+  D + FN++I+ +CK+G+
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L +LM++ GV PD +TY++L+DG+CL G++  A +L  SMVS G + D  +YN 
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  CK  ++EDA+ L+REM S  + P +ITYN +L GLFQ      A +L   +  + 
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
              +  T+   + GLCKN    EA+++FQ +     +L   T+N +I  L K+GR   A 
Sbjct: 615 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            LF  L   G +PDV T S M   L ++G +++ +DL L ME   C  +     +++R  
Sbjct: 675 DLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 734

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           +Q    ++    L  M  EK    + S +S  +DLLS   KY+E
Sbjct: 735 LQRGDITRAGTYLF-MIDEKHFSLEASTASLFLDLLS-GGKYQE 776



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 167/562 (29%), Positives = 276/562 (49%), Gaps = 42/562 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           +P + ++ IL+       + D   +    +   G   D      L+  LC    TS A  
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           +VL R+ +    PN  ++N L+ GLC E R  EA  L + +  +   C P+VV++ T+IN
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A   + EM++  G +  P+VVTY+SII  LCK   +DKA E+L  M    
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDR-GIL--PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TYNS++ G+C     KEA     +M  +GV+PDVVT+N++++Y CK+G+  +  
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGF----CLV---------------------------- 342
           ++ + M +RG+ P+  TY +L+ G+     LV                            
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 343 ---GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
              G++ +A  +F  M  +G   D  +Y  +I   CK  +VEDA+  + +M+ ER+ P  
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           I YN+L+  L        A +LI +M    +  D+  F + ID  CK G V+E+ ++F  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +  I TY+ LI+G C  G++  A KL   +   G  PD VT +T+I+  CK  +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           M+ A  L  +ME+    P  +T+  +L+G  Q  +++     L+    E     +LS  +
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQ-TRRTAAAKELYVGITESGTQLELSTYN 623

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            ++  L K+    E L  F++L
Sbjct: 624 IILHGLCKNNLTDEALRMFQNL 645



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 171/353 (48%), Gaps = 6/353 (1%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM-DK 312
            + PN+ TY  LI   CC             ++  G + D + F  ++   C D +  D 
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG--CRHDVYSYNIL 370
           ++ +L  M Q G  P+  +YN L+ G C   R   A EL   M   G  C  DV SY  +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           IN   K+  ++ A   Y EML   I P+V+TY+++++ L +   +  A++++  M  N V
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +P+  T+ + + G C +G   EA+   + + +   E  + TYN L++ LCK GR   A K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLRGF 549
           +F  +  +G  P++ T  T++     +G + + +  LLD+  +N + P+   F  L+  +
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG-LLDLMVRNGIHPNHYVFSILICAY 384

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +  K  + +++  KM  + L    ++  + V+ +L K  +  + +  F  ++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGT-VIGILCKSGRVEDAMRYFEQMI 436



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 42/316 (13%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFN---AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           ++A+ +F E++  G    +   N   A +  +     + + NR+        V P+  TY
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADE-VTPNLCTY 94

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV-CLYREM- 390
             L+   C  GR+        +++ KG R D  ++  L+   C D++  DA+  + R M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 391 -----------------LSERIR-------------------PSVITYNTLLSGLFQVGN 414
                            L +  R                   P V++Y T+++G F+ G+
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L  A     +M    ++P+  T+++ I  LCK   + +A++V  ++          TYN 
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +++G C  G+ K A     ++   G  PDVVT ++++ +LCK G+  +A  +   M  + 
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 535 CVPSEVTFCTLLRGFV 550
             P   T+ TLL+G+ 
Sbjct: 335 LKPEITTYGTLLQGYA 350


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 165/487 (33%), Positives = 262/487 (53%), Gaps = 3/487 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L+  L K  Q+D  + L   +  NG  PD+   N LI+ L K G  S AF +
Sbjct: 77  PNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTL 136

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +      P+T T+N LI GL   GR  +A  L +++    C P+V+T+++LI GL +
Sbjct: 137 FAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGK 196

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
              T+ A KLF+EM        KPD +T+ +++D L K G VD A ELL +MK+R + P 
Sbjct: 197 DGETVKAFKLFQEMKRRG---RKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPG 253

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+TYN+LI GF  V D  EA  L  EM  NG +PDVVT++ +I    K  ++D+  ++L+
Sbjct: 254 VVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLK 313

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M + G  PDT+TYN+L++G    G ++ A  LF  M SKGC  DV +Y+ LI A  K  
Sbjct: 314 KMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAA 373

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +VE A  L+ EM S  I+P + TY ++++ L + G + DA +L  +M+   + PD  T+ 
Sbjct: 374 RVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYN 433

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
            +++ L + G   EA ++F+ ++       + TY+ L+ GL K   +  AC L   L  +
Sbjct: 434 AFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQ 493

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G   D +     +  L   G +D+A++LL    +K   P   ++  L+    +  + S+ 
Sbjct: 494 GCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEA 553

Query: 559 VVLLHKM 565
              L  +
Sbjct: 554 FNTLEDL 560



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 170/489 (34%), Positives = 256/489 (52%), Gaps = 3/489 (0%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           PSP + ++  LL  LAK  Q +    LF+ L +    PD+   + LIN L + G    A 
Sbjct: 5   PSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAAL 64

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            V+  +      PN  T+N L++ L   G+  EA RL  ++    C P+V T+N LI+ L
Sbjct: 65  EVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
            +      A  LF EM  E G  C PD  TYNS+I GL K G   KA ELL +M+     
Sbjct: 125 GKAGRLSEAFTLFAEM-RERG--CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCP 181

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+V+TY+SLI G     +  +A  LF EM   G +PD +TF A+++   K G++D    L
Sbjct: 182 PDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALEL 241

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L+ M +RGV P  VTYN+L+ GF  VG +  A  L   M   GC+ DV +Y+ LI    K
Sbjct: 242 LDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             ++++A  + ++M  E   P  ITYNTL++GL + G L DA +L D+M+     PD  T
Sbjct: 302 ASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT 361

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++T I  L K   V  A  +F+ + +   +  + TY  +I  L K G++  A +LF  ++
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG  PDV+T +  ++ L + G+  +A  +  DM+    +P   T+  LL G  +  +  
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVD 481

Query: 557 KVVVLLHKM 565
               LL ++
Sbjct: 482 DACGLLKEL 490



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 136/384 (35%), Positives = 209/384 (54%), Gaps = 3/384 (0%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNVVT+N+L+N L +      A  LFEE+     A   PDVV+Y+ +I+ L + G  + A
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELK---AAKWTPDVVSYSCLINSLGRAGKWEAA 63

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E++ +M+ +   PN+ TYN+L+        + EA  L  EM DNG  PDV T+N +I+ 
Sbjct: 64  LEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIST 123

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G++ +   L   M +RG  PDT TYNSL+ G   VGR  +A EL   M   GC  D
Sbjct: 124 LGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPD 183

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +Y+ LI    KD +   A  L++EM     +P  IT+  L+  L + G + DAL+L+D
Sbjct: 184 VMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD 243

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+   V P   T+   I G  K G ++EA  +   ++   C+  + TY+CLI GL K  
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKAS 303

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +L  AC++  +++ +G  PD +T +T+I+ L K G ++ A  L   M++K C P  VT+ 
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYS 363

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAA 567
           TL+    +  +     VL  +M +
Sbjct: 364 TLITALGKAARVESACVLFEEMES 387



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 201/383 (52%), Gaps = 5/383 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    ++   K+G +  ++A+   D M +    PG+ ++  L+    K        +
Sbjct: 218 DSITFTALMDALGKAGRV--DDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYN 275

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L   +  NG  PD+   + LI  L K      A  VL ++ +    P+T+T+N LINGL 
Sbjct: 276 LLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLG 335

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G + +A RLF ++    C+P+VVT++TLI  L +      A  LFEEM +      +P
Sbjct: 336 KAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMES---VGIQP 392

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D+ TY SII  L K G VD A  L  +M+ + ++P+VITYN+ +        +KEA+ +F
Sbjct: 393 DLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIF 452

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M ++G+ PDV T++A++    K  ++D    LL+ +I++G   D++ ++  ++     
Sbjct: 453 EDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSW 512

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G +  A EL     SKG      SYN LI+A  K  +V +A     ++  +  +P +++Y
Sbjct: 513 GNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSY 572

Query: 403 NTLLSGLFQVGNLGDALKLIDKM 425
           ++L+S L Q G +  A +L+++M
Sbjct: 573 SSLISALGQTGQIDTAFELLEEM 595



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 205/420 (48%), Gaps = 3/420 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   F  M +    P   +FT L+  L K  + D  + L   +   G+ P +   N LI
Sbjct: 202 KAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALI 261

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
               K+G    A+ +L  + R+   P+ VT++ LI GL    ++ EA ++ KK+    C 
Sbjct: 262 AGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCP 321

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ +T+NTLINGL +      A +LF+ M ++    C PDVVTY+++I  L K   V+ A
Sbjct: 322 PDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG---CNPDVVTYSTLITALGKAARVESA 378

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L  +M+   I P++ TY S+I          +A  LF EM   G+ PDV+T+NA +N 
Sbjct: 379 CVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNS 438

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             + G+  +  ++ E M + G+ PD  TY++L+ G      +  A  L   ++ +GC  D
Sbjct: 439 LGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFD 498

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              ++  +        V++A  L +   S+ + P   +YN L+  L + G + +A   ++
Sbjct: 499 SLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLE 558

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            ++     PD  ++++ I  L + G +  A ++ + +     +L   +Y+ L+  L   G
Sbjct: 559 DLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 162/523 (30%), Positives = 272/523 (52%), Gaps = 5/523 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+     P   ++T ++   + +  +     +F+++ S GL P +   N  ++ LCK G 
Sbjct: 325 MVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGR 384

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           +  A  +   +      P+ V+++ L++G   EGR  +   LF  +       N   FN 
Sbjct: 385 SKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNI 444

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+   +      A+ +F EM    G   +PDVVTY+++I   C+ G +  A E   QM 
Sbjct: 445 LISAHAKRGMMDEAMLVFTEMQ---GQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV-QPDVVTFNAMINYNCKDGKM 310
              + PN + Y+SLI GFC   D  +AK L  EMM  G+ +P++V F+++I+  C +G++
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
              + +  L+I  G  P  VT+NSL+DG+CLVG++ +A  +  +MVS G   DV +YN L
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL 621

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           ++  CK  K++D + L+REML ++++P+ +TY+ +L GLF  G    A K+  +M  +  
Sbjct: 622 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT 681

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
             D  T+   + GLC+N    EA+ +F  +    C+  I   N +IN L K+ R + A  
Sbjct: 682 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAND 741

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           LF  +   G +P+V T   MIH L KEG +++A+ +   ME   C PS      ++R  +
Sbjct: 742 LFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLL 801

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           Q     K    + K+    ++  + S +S ++ L S   K+RE
Sbjct: 802 QKGDIVKAGYYMSKVDG-TIISLEASTTSLLMSLFSSKGKHRE 843



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 162/522 (31%), Positives = 265/522 (50%), Gaps = 42/522 (8%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF-VVLGR 141
           ++ IL+    + ++ D   + F RL   GL       N  + CLC    T  A  V+L R
Sbjct: 158 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHR 217

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA--CDPNVVTFNTLINGLCRT 199
           +      PN +++N +I  LC + R  EA  + +++      C P+VV+FNT+I+G  + 
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 277

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A  L  EMV +     +PDVVTYNSI+D LCK   +DKA+ +L QM D+ + P+ 
Sbjct: 278 GEVSKACNLINEMVQKG---VEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TY ++I G+ C   WKE+  +F +M   G+ P +VTFN+ ++  CK G+      + + 
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M  +G  PD V+Y+ L+ G+   GR +    LF SM  KG   + + +NILI+A+ K   
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-----QLNDVV--- 431
           +++A+ ++ EM  + +RP V+TY+TL+S   ++G L DA++   +M     + N VV   
Sbjct: 455 MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHS 514

Query: 432 ----------------------------PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
                                       P+   F++ I  LC  G V++A  VF  + + 
Sbjct: 515 LIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHI 574

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                I T+N LI+G C +G+++ A  +   +   G  PDVVT +T++   CK G++D  
Sbjct: 575 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDG 634

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             L  +M  K   P+ VT+  +L G     + S    + H+M
Sbjct: 635 LILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEM 676



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 225/430 (52%), Gaps = 8/430 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S +A   F  M      P + S++ILL   A   ++  + +LF  +   G+  +    N+
Sbjct: 385 SKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNI 444

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+   K G+   A +V   +      P+ VT++ LI+  C  GR+ +A   F ++    
Sbjct: 445 LISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIG 504

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +PN V +++LI+G C   + + A +L  EM+++   I +P++V ++SII  LC +G V 
Sbjct: 505 LEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSK--GIPRPNIVFFSSIIHSLCNEGRVM 562

Query: 242 KAKE---LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            A +   L++ + DR   P ++T+NSLI G+C V   ++A  +   M+  G++PDVVT+N
Sbjct: 563 DAHDVFNLVIHIGDR---PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYN 619

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +++  CK GK+D    L   M+ + V P TVTY+ ++DG    GR S A+++F  M+  
Sbjct: 620 TLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDS 679

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   D+ +Y IL+   C++   ++A+ L+ ++ +   +  +   NT+++ L++V    +A
Sbjct: 680 GTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEA 739

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L   +  + +VP+  T+   I  L K G V EA  +F ++    C       N +I  
Sbjct: 740 NDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRM 799

Query: 479 LCKMGRLKTA 488
           L + G +  A
Sbjct: 800 LLQKGDIVKA 809



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 197/410 (48%), Gaps = 4/410 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F IL++  AK    D  + +F  +   G+ PD+   + LI+  C+MG  + A     +++
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD-PNVVTFNTLINGLCRTRNT 202
                PNTV ++ LI+G C  G +++A  L  ++       PN+V F+++I+ LC     
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           + A  +F  +V   G   +P +VT+NS+IDG C  G ++KA  +L  M    I P+V+TY
Sbjct: 562 MDAHDVFN-LVIHIGD--RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTY 618

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N+L+ G+C      +   LF EM+   V+P  VT++ +++     G+     ++   MI 
Sbjct: 619 NTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMID 678

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G   D  TY  L+ G C       A  LF  + +  C+ D+   N +INA  K ++ E+
Sbjct: 679 SGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREE 738

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+  + +  + P+V TY  ++  L + G++ +A  +   M+ +   P S      I 
Sbjct: 739 ANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIR 798

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
            L + G +++A      +      L   T + L++     G+ +   K  
Sbjct: 799 MLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFL 848



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 204/423 (48%), Gaps = 18/423 (4%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T+  L++  CR R   +    F  ++    A  +   +  N+ +  LC     D+A 
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLR---AGLRTRTIEANTFLKCLCHAKRTDEAV 211

Query: 245 ELLL-QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ--PDVVTFNAMI 301
           ++LL +M D    PN I+YN++I   C     +EA  +   M   G +  PDVV+FN +I
Sbjct: 212 DVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVI 271

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K G++ K   L+  M+Q+GV PD VTYNS++D  C    + +A  +   MV KG  
Sbjct: 272 HGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVE 331

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +Y  +I+        +++  ++R+M S+ + P ++T+N+ +S L + G   DA ++
Sbjct: 332 PDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEI 391

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA------IRNCKCELRIETYNCL 475
              M     +PD  +++  + G    G   +   +F +      + NC C      +N L
Sbjct: 392 FQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHC------FNIL 445

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+   K G +  A  +F  +Q +G  PDVVT ST+I   C+ G++  A +    M +   
Sbjct: 446 ISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGL 505

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            P+ V + +L+ GF  +    K   L+ +M ++ +   ++   S ++  L  + +  +  
Sbjct: 506 EPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAH 565

Query: 596 NQF 598
           + F
Sbjct: 566 DVF 568



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 19/146 (13%)

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE-------LRIETYNCLINGLCKMG 483
            PDS +        C NG  L  + +F  I  C+ E       L + TY  L++  C+  
Sbjct: 122 APDSVS--------CSNGPAL-VLALFNRI--CREEAGPRVAPLSVHTYGILMDCCCRAR 170

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD-MEAKNCVPSEVTF 542
           R       F RL   G     +  +T +  LC   + D+A D+LL  M    CVP+ +++
Sbjct: 171 RPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISY 230

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAE 568
            T+++    +++  + + ++ +MA E
Sbjct: 231 NTVIKSLCGDSRSQEALDMVQRMAKE 256


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 163/534 (30%), Positives = 283/534 (52%), Gaps = 4/534 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  MI     P + ++T L+       Q+  VV + K ++++GL PD F   LL++ LCK
Sbjct: 262 FQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCK 321

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G  + A  +   ++R    P+   +  +++G   +G + E       +      PN   
Sbjct: 322 KGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYI 381

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FN +     +      A+ +F +M  +      P+VV Y ++ID LCK G VD A+    
Sbjct: 382 FNIVFCAFAKKAMIGEAMDIFNKMRQQG---LSPNVVNYATLIDALCKLGRVDDAELKFN 438

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           QM +  + PN++ + SL+ G C +D W++A  LF EM++ G+ P+VV FN ++   C +G
Sbjct: 439 QMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEG 498

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ K  RL++LM + G  PD ++YN+L+ G CLVG+   A +L   M+S G + +  +YN
Sbjct: 499 RVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYN 558

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L++  C+D +++DA  +++EMLS  I P V+TYNT+L GLF+     +A +L   M  +
Sbjct: 559 TLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITS 618

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
                 +T+   ++GL KN  V EA+++FQ++ +   ++ I T+N +I  L K GR + A
Sbjct: 619 GKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDA 678

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             LF  +   G +PDV T   +   L +EG +++ + +  +ME   C P+ +    L+R 
Sbjct: 679 MNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRR 738

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +     S+    L K+  EK    + S +S ++ L S+++   + L +  H L
Sbjct: 739 LLLRGDISRAGAYLSKI-DEKNFSLEASTTSMLISLFSREEHQAKSLPEKYHFL 791



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 155/569 (27%), Positives = 276/569 (48%), Gaps = 52/569 (9%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQY------DT 99
            + + +  R ++G+++ ++A+  FD  +       + +F  LL  ++   +       + 
Sbjct: 15  ELERIIGARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSEL 74

Query: 100 VVSLFKRLNSN---GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF--------- 147
           VVS F R+  +    + PD+F  ++L+ C C+MG     F   G IL++ +         
Sbjct: 75  VVSCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVN 134

Query: 148 ----------------------------TPNTVTFNFLINGLCAEGRIMEAARLFKKL-- 177
                                       TPN V++N L+ G C E R  EA  L   +  
Sbjct: 135 RLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMAD 194

Query: 178 -NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
             V +C PN+V++NT+ING         A  LF +M ++      P+VVTY  +IDGLCK
Sbjct: 195 GQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQG---IPPNVVTYTIVIDGLCK 251

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              VD+A+ +  QM D+ + PN++TY  LI G+  +  WKE   +  EM  +G++PD  T
Sbjct: 252 AQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFT 311

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +++Y CK GK  +  +L + MI++G+ PD   Y  ++ G+   G +S        MV
Sbjct: 312 YGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMV 371

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G   + Y +NI+  A  K   + +A+ ++ +M  + + P+V+ Y TL+  L ++G + 
Sbjct: 372 GNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVD 431

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           DA    ++M    V P+   F + + GLC      +A ++F  + N      +  +N ++
Sbjct: 432 DAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIM 491

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
             LC  GR+  A +L   ++  G  PD+++ + +I   C  G+ D+A+ LL  M +    
Sbjct: 492 CNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLK 551

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           P+E T+ TLL G+ ++ +      +  +M
Sbjct: 552 PNECTYNTLLHGYCRDGRIDDAYSVFQEM 580



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 15/244 (6%)

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD------ALKLIDKMQ 426
           A      V+DA+ L+ E L      S+I +N LL+ +      G        +   ++M 
Sbjct: 24  ARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMI 83

Query: 427 LN---DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNCLINGLCKM 482
            +    V PD FT++  +   C+ G +      F  I +       +   N L+ GLC  
Sbjct: 84  RDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDA 143

Query: 483 GRLKTACK-LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL---LDMEAKNCVPS 538
            R+  A   L  R+   G  P+VV+ +T++   C E + ++A +LL    D + ++C P+
Sbjct: 144 KRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPN 203

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            V++ T++ GF    +  K   L   M  ++ +  ++   + V+D L K +        F
Sbjct: 204 LVSYNTVINGFFTEGQVDKAYNLFLDM-TDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVF 262

Query: 599 RHLL 602
           + ++
Sbjct: 263 QQMI 266



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 5/208 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  M+    +P + ++  +L  L K +++     L+  + ++G    ++  N++
Sbjct: 571 DDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNII 630

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N L K      A  +   +       + +TFN +I  L  +GR  +A  LF  ++    
Sbjct: 631 LNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGL 690

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF-GAICKPDVVTYNSIIDGLCKDGFVD 241
            P+V T+  +   L        +L+ F+ M +E   + C P+ +  N ++  L   G + 
Sbjct: 691 VPDVTTYRLIAENLIEEG----SLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDIS 746

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGF 269
           +A   L ++ ++N +    T + LI  F
Sbjct: 747 RAGAYLSKIDEKNFSLEASTTSMLISLF 774



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F  +        + +F I++  L K+ + +  ++LF  +++NGL PD+    L+
Sbjct: 641 DEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLI 700

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
              L + G       +   + +S   PN++  NFL+  L   G I  A     K++    
Sbjct: 701 AENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNF 760

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
                T + LI+   R  +   +L      +NE
Sbjct: 761 SLEASTTSMLISLFSREEHQAKSLPEKYHFLNE 793


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 163/547 (29%), Positives = 278/547 (50%), Gaps = 48/547 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVL 119
            +A + FD +++      +      L  +A++      VS + R+   G   + P +   
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKVTPTVHTY 95

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLN 178
            +LI C C+ G     F  LG +++  F  + +TF  L+ GLCA+ R  +A  +  +++ 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C P+V ++N L+ GLC    +  AL+L   M ++ G    PDVV+YN++++G  K+G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 239 F--------VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
                    +DKA E+L  M    + P+ +TYNS++ G+C     KEA     +M  +GV
Sbjct: 216 IQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 275

Query: 291 QPDVVTFNAMINY-----------------------------------NCKDGKMDKVNR 315
           +P+VVT+++++NY                                   +CK+G++ +  +
Sbjct: 276 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEK 335

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L +LM++ GV PD +TYN+L+DG CL G++  A +L  SMVS G + D+ +Y  LIN  C
Sbjct: 336 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 395

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           +  +++DA+ L++EM+S  + P++ITYN +L GLF       A +L   +  +    +  
Sbjct: 396 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS 455

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+   + GLCKN    EA+++FQ +     +L   T+N +I  L K GR+  A  LF   
Sbjct: 456 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAH 515

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G +PDV T S M   L ++G +++ +DL L ME   C        +++R  +Q    
Sbjct: 516 SANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDI 575

Query: 556 SKVVVLL 562
           ++    L
Sbjct: 576 TRAGTYL 582



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 202/414 (48%), Gaps = 20/414 (4%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P V T+  LI   CR     +    F  + N      + D +T+  ++ GLC D     A
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLG---FAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 244 KELLLQ-MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN---GVQPDVVTFNA 299
            +++L+ M +    P+V +YN+L+ G C  +  +EA  L   M D+   G  PDVV++N 
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 300 MINYNCKDG--------KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           ++N   K+G         MDK   +L  M++ GV PD +TYNS++ G+C  G+   A   
Sbjct: 207 VLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 266

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              M S G   +V +Y+ L+N  CK+ +  +A  ++  M    + P + TY TLL G  +
Sbjct: 267 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK 326

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G + ++ KL D M    V PD  T+ T IDG C  G + EA ++  ++ +   +  I T
Sbjct: 327 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 386

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y  LING C++ R+  A  LF  +   G  P+++T + ++  L    +   A +L + + 
Sbjct: 387 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 446

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
                    T+  +L G  +NN   + + +      + L ++DL L ++  +++
Sbjct: 447 KSGTQLELSTYNIILHGLCKNNLTDEALRMF-----QNLCLTDLQLETRTFNIM 495



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+   + M+K    P   ++  +L     + Q    +   K++ S+G+ P++   + L
Sbjct: 226 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 285

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G ++ A  +   + +    P+  T+  L+ G C EGR++E+ +LF  +     
Sbjct: 286 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGV 345

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+++T+NTLI+G C       A KL   MV+      KPD+VTY ++I+G C+   +D 
Sbjct: 346 KPDIITYNTLIDGCCLAGKMDEATKLLASMVS---VGVKPDIVTYGTLINGYCRVSRMDD 402

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +M    ++PN+ITYN ++ G         AK L++ +  +G Q ++ T+N +++
Sbjct: 403 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 462

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+   D+  R+ + +    +  +T T+N ++      GR+  A++LF +  + G   
Sbjct: 463 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVP 522

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL---GDAL 419
           DV +Y+++     +   +E+   L+  M            N+++  L Q G++   G  L
Sbjct: 523 DVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 582

Query: 420 KLIDK 424
            +ID+
Sbjct: 583 FMIDE 587



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 151/331 (45%), Gaps = 11/331 (3%)

Query: 23  WCSFGRPPNPKTDLSSHHFKDGT-----SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKP 77
           +CS G+P      L      DG      + +  +N   K+G   S EA   FD M K   
Sbjct: 254 YCSSGQPKEAIGTLKKMR-SDGVEPNVVTYSSLMNYLCKNGR--STEARKIFDSMTKRGL 310

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + ++  LL    K  +      LF  +   G+ PD+   N LI+  C  G    A  
Sbjct: 311 EPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 370

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  ++     P+ VT+  LING C   R+ +A  LFK++      PN++T+N ++ GL 
Sbjct: 371 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 430

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            TR T  A +L+  +      +   ++ TYN I+ GLCK+   D+A  +   +   ++  
Sbjct: 431 HTRRTAAAKELYVSITKSGTQL---ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 487

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
              T+N +I          EAK LF     NG+ PDV T++ M     + G +++++ L 
Sbjct: 488 ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLF 547

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
             M + G + D+   NS++      G I+RA
Sbjct: 548 LSMEENGCSADSRMLNSIVRKLLQRGDITRA 578


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 158/516 (30%), Positives = 277/516 (53%), Gaps = 4/516 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +  M     +L  +    Q +  V L K+++  GL PD+   +LLI+  CK+G  + A  
Sbjct: 187 AQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARN 246

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   ++R    P+  T+  L++G   +G +++   L   +           FN LI    
Sbjct: 247 IFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYA 306

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +      A+  F EM  +      P+VVTY ++ID LCK G V+ A     QM    ++P
Sbjct: 307 KNETLDKAMTAFIEMRQKG---FSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSP 363

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           ++IT+ SLI G C + +WK+ + L  EM++ G+ P+ +  N +++  CK+G++ + +   
Sbjct: 364 DIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFF 423

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + +I  GV PD V+Y  L+DG+CL G++  + +L   MVS G R D  +Y+ L+N  CK+
Sbjct: 424 DQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKN 483

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +V+DA+ LYREM S+ ++P+ ITYN +L GLF  G +  A +   K+  + +     T+
Sbjct: 484 GRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTY 543

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              + GLC+N FV EA+++FQ +R+ + +L + T+N +I GL K+GR+  A  LF  +  
Sbjct: 544 NIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILP 603

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G +PD +    MI    +EG ++++++L L ME   C  +  T   ++R  ++     +
Sbjct: 604 SGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRR 663

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
               L K+  EK    + S +  ++ ++S+ K  +E
Sbjct: 664 AGTYLTKI-DEKEYSVEASTAVLLISIVSERKYQKE 698



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 259/535 (48%), Gaps = 54/535 (10%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT------ 99
            + + + ++H+SG++   +A+  FD ++    S  + +F  +LT++A      +      
Sbjct: 14  QLERIIVEQHRSGSLGLEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAA 73

Query: 100 -VVSLF---KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
             VSLF    ++  N L  D     +LI C C +G+   A                    
Sbjct: 74  LAVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFA-------------------- 113

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
                L  E R   AA      + + C PNV+++N +INGL +      A  LF EM+  
Sbjct: 114 -----LEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEML-- 166

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN----------------INPNV 259
            G    P++VTYNS+IDGLCK   +DKA+ +L QM D+                 + P+V
Sbjct: 167 -GQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDV 225

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TY+ LI  +C +    EA+ +F  M+  G  PD  T+  +++     G +  ++ LL L
Sbjct: 226 VTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLAL 285

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           MIQ G+  +   +N L+  +     + +A   F+ M  KG   +V +Y  +I+  CK  +
Sbjct: 286 MIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGR 345

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           VEDAV  + +M+SE + P +IT+ +L+ GL  +G      KL  +M    + P++    T
Sbjct: 346 VEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNT 405

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +D LCK G VLEA   F  I +   +  + +Y  LI+G C  G++  + KL  R+   G
Sbjct: 406 IMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIG 465

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             PD VT S +++  CK G++D A  L  +M +K+  P+ +T+  +L G     +
Sbjct: 466 LRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGR 520



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 156/328 (47%), Gaps = 40/328 (12%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +   +AV  F  M+    SP + +FT L+  L    ++  V  L   + + G+ P+
Sbjct: 342 KAGRV--EDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPN 399

Query: 116 LFVLNLLINCLCKMG--------------------ITSGAFVV---------------LG 140
              LN +++ LCK G                    + S   ++               LG
Sbjct: 400 AIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLG 459

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           R++     P+ VT++ L+NG C  GR+ +A  L++++      PN +T+N +++GL    
Sbjct: 460 RMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAG 519

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
             + A + + ++V+   +  +  + TYN ++ GLC++ FVD+A  +   ++ +     V 
Sbjct: 520 RVVAAREFYMKIVD---SGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVR 576

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           T+N +I G   V    +AK LF  ++ +G+ PD + +  MI  + ++G +++ + L   M
Sbjct: 577 TFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSM 636

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRA 348
            + G   ++ T N+++      G + RA
Sbjct: 637 EKNGCTANSRTLNAIVRKLLEKGDVRRA 664



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 120/255 (47%), Gaps = 5/255 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA  FFD +I +   P + S+TIL+     + + D  + L  R+ S GL PD    + L+
Sbjct: 418 EAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALL 477

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  CK G    A  +   +      PN +T+N +++GL   GR++ A   + K+      
Sbjct: 478 NGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQ 537

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + T+N ++ GLC       AL++F+ + + EF    + +V T+N +I GL K G +  
Sbjct: 538 LGINTYNIVLGGLCENSFVDEALRMFQGLRSKEF----QLEVRTFNIMIVGLLKVGRIGD 593

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK L   +    + P+ I Y  +I         +E+  LF+ M  NG   +  T NA++ 
Sbjct: 594 AKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVR 653

Query: 303 YNCKDGKMDKVNRLL 317
              + G + +    L
Sbjct: 654 KLLEKGDVRRAGTYL 668


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 163/518 (31%), Positives = 275/518 (53%), Gaps = 10/518 (1%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFK-RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
           +  + I+L  L +       + +F+  +  +G+ P +   N +IN LCK         + 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             ++     P+ VT+N LI+ LC  G + EA RL   ++   C PNVVT++ LINGLC+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN--INP 257
                A +L +EM  +   +  P+++TYNS +DGLCK     +A EL+  ++D +  ++P
Sbjct: 121 GRIDEARELIQEMTRKSCDVL-PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 179

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + +T+++LI G C      EA  +F +M+  G  P+V+T+NA++N  CK  KM++ + ++
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV-----YSYNILIN 372
           E M+ +GV PD +TY+ L+D FC   R+  A EL   M S+GC  +V      ++NILI 
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             CK    E A  L+ EM+++ ++P V+T+  L+ GL + G +  A  ++D M    V P
Sbjct: 300 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 359

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           +  T+   + GLCK+G + EA Q  + + +  C     TY  L+  LC+  R   A +L 
Sbjct: 360 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 419

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             L+  G  PD VT + ++  L K G+ ++A  +L +M  K   P   TF     G  ++
Sbjct: 420 SELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRS 479

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
              +  + LL  + A K ++ D +  S ++D + +  K
Sbjct: 480 GNLAGTMELLRVVLA-KGMLPDATTCSSILDWVCRSGK 516



 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 160/501 (31%), Positives = 266/501 (53%), Gaps = 10/501 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M +   +P + ++  ++  L K+      + LF+ L   G  PD+   N LI+ LCK G 
Sbjct: 28  MARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 87

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD--PNVVTF 189
              A  + G +      PN VT++ LINGLC  GRI EA  L +++   +CD  PN++T+
Sbjct: 88  LEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 147

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           N+ ++GLC+   T  A +L   + +  G++   PD VT++++IDGLCK G +D+A  +  
Sbjct: 148 NSFLDGLCKQSMTAEACELMRSLRD--GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 205

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M      PNVITYN+L+ G C  D  + A  +   M+D GV PDV+T++ +++  CK  
Sbjct: 206 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 265

Query: 309 KMDKVNRLLELMIQRGVNP-----DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           ++D+   LL  M  RG  P     D VT+N L+ G C  G   +A  LF  MV+K  + D
Sbjct: 266 RVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 325

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V ++  LI+  CK  +VE A  +   M +  + P+V+TYN L+ GL + G + +A + ++
Sbjct: 326 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 385

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M  +  VPDS T+ + +  LC+     +A+Q+   +++   +    TYN L++GL K G
Sbjct: 386 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSG 445

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           + + A  +   +  KG  PD  T +     L + G +    +LL  + AK  +P   T  
Sbjct: 446 KTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCS 505

Query: 544 TLLRGFVQNNKKSKVVVLLHK 564
           ++L    ++ K   V  ++ +
Sbjct: 506 SILDWVCRSGKLDDVKAMIKE 526



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 160/502 (31%), Positives = 254/502 (50%), Gaps = 51/502 (10%)

Query: 40  HFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT 99
           H  D  +    ++   K+G++   EA      M      P + ++++L+  L K  + D 
Sbjct: 68  HHPDVVTYNTLIDSLCKAGDL--EEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDE 125

Query: 100 VVSLFKRLN--SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC---FTPNTVTF 154
              L + +   S  + P++   N  ++ LCK  +T+ A  ++ R LR      +P+TVTF
Sbjct: 126 ARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLRVSPDTVTF 184

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           + LI+GLC  G+I EA  +F  +      PNV+T+N L+NGLC+      A  + E MV+
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV-----ITYNSLICGF 269
           +      PDV+TY+ ++D  CK   VD+A ELL  M  R   PNV     +T+N LI G 
Sbjct: 245 KG---VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C   ++++A  LF EM+   +QPDV+TF A+I+  CK G+++    +L+LM   GV P+ 
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 361

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTYN+L+ G C  GRI  A +    MVS GC  D  +Y  L+ A C+  + +DA+ L  E
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           + S    P  +TYN L+ GL++ G    A+ ++++M      PDSFTFA    GL ++  
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRS-- 479

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
                                            G L    +L   +  KG +PD  TCS+
Sbjct: 480 ---------------------------------GNLAGTMELLRVVLAKGMLPDATTCSS 506

Query: 510 MIHWLCKEGQMDKANDLLLDME 531
           ++ W+C+ G++D    ++ + E
Sbjct: 507 ILDWVCRSGKLDDVKAMIKEFE 528



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 125/234 (53%), Gaps = 5/234 (2%)

Query: 364 VYSYNILINANCKDQKVEDAVCLYR-EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           V  YNI++ + C+      A+ ++R EM  + + P+++TYNT+++GL +  +LG  ++L 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           +++      PD  T+ T ID LCK G + EA ++   + +  C   + TY+ LINGLCK+
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 483 GRLKTACKLFHRLQHKG--PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN--CVPS 538
           GR+  A +L   +  K    +P+++T ++ +  LCK+    +A +L+  +   +    P 
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
            VTF TL+ G  +  +  +   +   M A   V + ++ ++ V  L   DK  R
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 234


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 160/400 (40%), Positives = 234/400 (58%), Gaps = 12/400 (3%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T ++A+  F+ ++ M P P +  F  LLT +AK K Y TV+SL  +++S G+ P+++ LN
Sbjct: 25  TLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN 84

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +LIN  C +     AF VL +IL+    P+  TF  LI GLC EG+I EA  LF K+   
Sbjct: 85  ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 144

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              PNVVT+ TLINGLC+  NT  A++L   M  E G  C+PDVV Y SIID LCKD  V
Sbjct: 145 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM--EQGN-CQPDVVIYTSIIDSLCKDRQV 201

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A  L  QM  + I+P++ TY SL+   C + +WK    L  +M+++ + PDVV F+ +
Sbjct: 202 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 261

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK+GK+ + + ++++MIQRGV PD VTY +LMDG CL   +  A ++F  MV KG 
Sbjct: 262 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 321

Query: 361 RHDVYSYNILINANCKDQ----KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             DV SY  LINA  KD      +++ + L +E        +V         LF+ G   
Sbjct: 322 APDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGR-- 379

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
               L+++M  + ++P+   F+T +D LCK G V+EA  V
Sbjct: 380 ---TLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV 416



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 199/413 (48%), Gaps = 18/413 (4%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A     R+L     P+ V F  L+  +           L  +++ F   PNV T N LIN
Sbjct: 29  ALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILIN 88

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             C       A  +  +++ + G   +PD  T+ ++I GLC +G + +A  L  +M D  
Sbjct: 89  SFCHLNRVGFAFSVLAKIL-KLGH--QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PNV+TY +LI G C V +   A  L   M     QPDVV + ++I+  CKD ++ +  
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L   M+ +G++PD  TY SL+   C +        L   MV+     DV  ++ +++A 
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 265

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK+ KV +A  +   M+   + P V+TY TL+ G      + +A+K+ D M      PD 
Sbjct: 266 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 325

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            ++ T I+   K+G  L ++Q  + I   K     ET + +  G  ++ R K   KLF +
Sbjct: 326 ISYTTLINAGKKDGGGLVSLQ--EVIGLVK-----ETPDAVKGGAVEVIR-KDKMKLFEK 377

Query: 495 -------LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
                  + +   +P+VV  ST++  LCKEG++ +A+D++  M  +   P+ V
Sbjct: 378 GRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAV 430



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 36/223 (16%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           ++DA+  +  +L     PS++ +  LL+ + ++ +    L L  +M    V P+ +T   
Sbjct: 26  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+  C    V  A  V   I     +    T+  LI GLC  G++  A  LF ++  +G
Sbjct: 86  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P+VVT  T+I+ LCK G    A  LL  ME  NC P                      
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP---------------------- 183

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                         D+ + + ++D L KD++  E  N F  ++
Sbjct: 184 --------------DVVIYTSIIDSLCKDRQVTEAFNLFSQMV 212


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  285 bits (728), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 182/584 (31%), Positives = 292/584 (50%), Gaps = 38/584 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G++  ++A   +  M+     P + ++  ++  L K +  D  + 
Sbjct: 198 DVVSYTTVINGFFKEGDL--DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAME 255

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ P+    N +++  C  G    A   L ++      P+ VT+N L++ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
             GR  EA ++F  +      P + T+ TL+ G   T+  LV +    +++   G     
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNH 374

Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                 IC                        PD VTY ++I  LCK G V+ A     Q
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  ++P  I YNSLI   C  D W +AK L +EM+D G+  D + FN++I+ +CK+G+
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L +LM++ GV P+ +TY++L+DG+CL G++  A +L  SMVS G + D  +YN 
Sbjct: 495 VIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  CK  ++EDA+ L+REM S  + P +ITYN +L GLFQ      A +L   +  + 
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
              +  T+   + GLCKN    EA+++FQ +     +L   T+N +I  L K+GR   A 
Sbjct: 615 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            LF  L   G +PDV T S M   L ++G +++ +DL L ME   C  +     +++R  
Sbjct: 675 DLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 734

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           +Q    ++    L  M  EK    + S +S  +DLLS   KY+E
Sbjct: 735 LQRGDITRAGTYLF-MIDEKHFSLEASTASLFLDLLS-GGKYQE 776



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 168/562 (29%), Positives = 276/562 (49%), Gaps = 42/562 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           +P + ++ IL+       + D   +    +   G   D      L+  LC    TS A  
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           +VL R+ +    PN  ++N L+ GLC E R  EA  L + +  +   C P+VV++ T+IN
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A   + EM++  G +  P+VVTYNSII  LCK   +DKA E+L  M    
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDR-GIL--PNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TYNS++ G+C     KEA     +M  +GV+PDVVT+N++++Y CK+G+  +  
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGF----CLV---------------------------- 342
           ++ + M +RG+ P+  TY +L+ G+     LV                            
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 343 ---GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
              G++ +A  +F  M  +G   D  +Y  +I   CK  +VEDA+  + +M+ ER+ P  
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           I YN+L+  L        A +LI +M    +  D+  F + ID  CK G V+E+ ++F  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +  I TY+ LI+G C  G++  A KL   +   G  PD VT +T+I+  CK  +
Sbjct: 505 MVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           M+ A  L  +ME+    P  +T+  +L+G  Q  +++     L+    E     +LS  +
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQ-TRRTAAAKELYVGITESGTQLELSTYN 623

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            ++  L K+    E L  F++L
Sbjct: 624 IILHGLCKNNLTDEALRMFQNL 645



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 171/353 (48%), Gaps = 6/353 (1%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM-DK 312
            + PN+ TY  LI   CC             ++  G + D + F  ++   C D +  D 
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG--CRHDVYSYNIL 370
           ++ +L  M Q G  P+  +YN L+ G C   R   A EL   M   G  C  DV SY  +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           IN   K+  ++ A   Y EML   I P+V+TYN++++ L +   +  A++++  M  N V
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +P+  T+ + + G C +G   EA+   + + +   E  + TYN L++ LCK GR   A K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLRGF 549
           +F  +  +G  P++ T  T++     +G + + +  LLD+  +N + P+   F  L+  +
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG-LLDLMVRNGIHPNHYVFSILICAY 384

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +  K  + +++  KM  + L    ++  + V+ +L K  +  + +  F  ++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGT-VIGILCKSGRVEDAMRYFEQMI 436



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 136/316 (43%), Gaps = 42/316 (13%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFN---AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           ++A+ +F E++  G    +   N   A +  +     + + NR+        V P+  TY
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADE-VTPNLCTY 94

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV-CLYREM- 390
             L+   C  GR+        +++ KG R D  ++  L+   C D++  DA+  + R M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 391 -----------------LSERIR-------------------PSVITYNTLLSGLFQVGN 414
                            L +  R                   P V++Y T+++G F+ G+
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L  A     +M    ++P+  T+ + I  LCK   + +A++V  ++          TYN 
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +++G C  G+ K A     ++   G  PDVVT ++++ +LCK G+  +A  +   M  + 
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 535 CVPSEVTFCTLLRGFV 550
             P   T+ TLL+G+ 
Sbjct: 335 LKPEITTYGTLLQGYA 350


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  284 bits (727), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 168/514 (32%), Positives = 269/514 (52%), Gaps = 11/514 (2%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK-------NKQYD 98
            + + +  R +SG++  ++A+  FD ++       + +F  LLT +++         + +
Sbjct: 14  ELERVIGSRARSGSLGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESE 73

Query: 99  TVVSLFKRLNSN---GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
            VVSLF R+       + PDL   ++LI C C+MG     F   G IL+S +  N +  N
Sbjct: 74  LVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVIN 133

Query: 156 FLINGLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
            L+ GLC   R+ EA   L K++    C P+VV++NTL+ G C  +    AL+L   M +
Sbjct: 134 QLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMAD 193

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
             G  C P+VV+Y ++I+G   +G VDKA  L L+M DR I PNV+TY ++I G C    
Sbjct: 194 SQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
              A+ +F +M+D GV+PD  T+N +I+     GK  +V R+LE M   G+ PD  TY S
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++  C  GR   AR  F SM+ KG + +V  Y ILI+       + +   L   M+   
Sbjct: 314 LLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           + P    +N + +   +   + +A+ + +KM+   + PD   F   ID LCK G V +AV
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAV 433

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
             F  + N      I  +N L+ GLC + + + A + +  + ++G  PDVV  +T++  L
Sbjct: 434 LKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNL 493

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           C +GQ+ KA  L+  ME     P  +++ TL+ G
Sbjct: 494 CTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGG 527



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 268/526 (50%), Gaps = 4/526 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  MI     P   ++  L+       ++  VV + + ++++GL PD +    L+N LC 
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A      ++R    PN   +  LI+G   +G + E   L   +      P+   
Sbjct: 321 NGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FN +     +      A+ +F +M  +      PDVV + ++ID LCK G VD A     
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQG---LSPDVVNFGALIDALCKLGRVDDAVLKFN 437

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           QM +  + PN+  +NSL+ G C VD W++AK  + EM++ G++PDVV FN ++   C  G
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ K  RL++LM + G  PD ++Y +L+ G CLVGRI  A +    M+S G + D ++YN
Sbjct: 498 QVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L++  C+  +++DA  ++REML   I P V+TY+T+L GLF      +A +L   M  +
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
               + + +   ++GL KN  V EA ++FQ++ +   +L I T+N +I  L K GR + A
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             LF  +   G +PDV T   +   L +EG +++ +DL   ME     P+      L+R 
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            +     ++    L K+  EK    + S ++ ++ LLS+D+ +   
Sbjct: 738 LLHRGDITRAGAYLSKL-DEKNFSLEASTTAMLISLLSRDEYHHHA 782



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 242/493 (49%), Gaps = 6/493 (1%)

Query: 35  DLSSHHFK-DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK 93
           ++S+H  K D  +    LN  +   N    EA +FFD MI+    P +  + IL+   A 
Sbjct: 298 EMSAHGLKPDCYTYGSLLN--YLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYAT 355

Query: 94  NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVT 153
                 +  L   +  NGL PD  + N++     K  +   A  +  ++ +   +P+ V 
Sbjct: 356 KGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415

Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
           F  LI+ LC  GR+ +A   F ++      PN+  FN+L+ GLC       A + + EM+
Sbjct: 416 FGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML 475

Query: 214 NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
           N+     +PDVV +N+I+  LC  G V KA+ L+  M+     P+VI+Y +LI G C V 
Sbjct: 476 NQG---IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVG 532

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
              EA      M+  G++PD  T+N +++  C+ G++D    +   M++ G+ P  VTY+
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +++ G     R S A+EL+++M++ G + +++ YNI++N   K+  V++A  L++ + S+
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             +  + T+N ++  LF+ G   DA+ L   +    +VPD FT+    + L + G++ E 
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             +F A+            N L+  L   G +  A     +L  K    +  T + +I  
Sbjct: 713 DDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISL 772

Query: 514 LCKEGQMDKANDL 526
           L ++     A  L
Sbjct: 773 LSRDEYHHHATSL 785



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 209/446 (46%), Gaps = 17/446 (3%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCR-------TRNTLVALKLFEEMVNEFGAICK 221
           +A +LF  L   A   +++ FN L+  + R       T  + + + LF  M+ E      
Sbjct: 32  DALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVT 91

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD+ TY+ +I   C+ G ++        +       N I  N L+ G C     +EA  +
Sbjct: 92  PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151

Query: 282 FIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ---RGVNPDTVTYNSLMD 337
            I+ M   G  PDVV++N ++   C + + ++   LL +M     R   P+ V+Y ++++
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           GF   G++ +A  LF+ M+ +G + +V +Y  +I+  CK Q V+ A  ++++M+ + ++P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
              TYN L+ G   +G   + ++++++M  + + PD +T+ + ++ LC NG   EA   F
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
            ++     +  +  Y  LI+G    G L     L + +   G  PD    + +     K+
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
             +D+A  +   M+ +   P  V F  L+    +  +    V+  ++M  E +  +    
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 578 SSKVVDLLSKDKK------YRECLNQ 597
           +S V  L + DK       Y E LNQ
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQ 477


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 167/493 (33%), Positives = 264/493 (53%), Gaps = 43/493 (8%)

Query: 47  IAKFLNDRHKSGNITSN--EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           I++F      +  ++ N  EA+  F  MI+ +P P +  F+ LL+ +AK+K YD V+SLF
Sbjct: 33  ISRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLF 92

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
             +   G+  DL+                                   T+N +IN LC  
Sbjct: 93  HNMEICGIGHDLY-----------------------------------TYNIVINCLCRC 117

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
            R + A  +  K+  F  +P+VVT ++LING C+      A+ L  +M       CK DV
Sbjct: 118 SRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEE---MRCKLDV 174

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           V YN+IIDG CK G V+ A  L  +M+   +  + +TYNSL+ G CC     +A  L  +
Sbjct: 175 VIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRD 234

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+   + P+V+TF A+IN   ++GK  +  +  E MI+R ++PD  TYNS++ G C+ G+
Sbjct: 235 MVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQ 294

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A+++   MV+KGC  DV +YN LIN  CK ++V++   L REM    +    +T+NT
Sbjct: 295 VDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNT 354

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           ++ G FQ G    A ++  +M      P+  T++  + GLC N  V +A+ +F++++  +
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSE 411

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            EL I TYN +I+G+C +G ++ A  LF  L  KG  PDVVT +TMI   C++   DKA+
Sbjct: 412 MELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKAD 471

Query: 525 DLLLDMEAKNCVP 537
            L   M+    +P
Sbjct: 472 FLYRKMQEDGLLP 484



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 221/423 (52%), Gaps = 6/423 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ V F+ L++ +           LF  + +     ++ T+N +IN LCR    ++AL +
Sbjct: 67  PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M+ +FG   +PDVVT +S+I+G C+   V  A +L+ +M++     +V+ YN++I G
Sbjct: 127 VGKMM-KFGY--EPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDG 183

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           FC       A  LF  M  +GV+ D VT+N+++   C  G+     RL+  M+ R + P+
Sbjct: 184 FCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPN 243

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +T+ +L++ F   G+   A++ +  M+ +    DV++YN +I+  C   +V++A  +  
Sbjct: 244 VITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILD 303

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+++   P V+TYNTL++G  +   + +  KL+ +M    +V D+ TF T I G  + G
Sbjct: 304 LMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAG 363

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
               A ++F  + +      I TY+ L+ GLC   R++ A  LF  +Q      D+ T +
Sbjct: 364 RPDAAQEIFSRMGS---RPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYN 420

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +IH +C  G ++ A DL   +  K   P  VT+ T++ GF +     K   L  KM  +
Sbjct: 421 IVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQED 480

Query: 569 KLV 571
            L+
Sbjct: 481 GLL 483



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 173/330 (52%), Gaps = 2/330 (0%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D+A +L   M      P+++ ++ L+       ++     LF  M   G+  D+ T+N 
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +IN  C+  +      ++  M++ G  PD VT +SL++GFC   R+  A +L   M    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C+ DV  YN +I+  CK   V +A+ L+  M  + +R   +TYN+L++GL   G   DA 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-IRNCKCELRIETYNCLING 478
           +L+  M + D+VP+  TF   I+   + G  LEA + ++  IR C  +  + TYN +I+G
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRC-IDPDVFTYNSMIHG 288

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LC  G++  A ++   +  KG  PDVVT +T+I+  CK  ++D+   L+ +M  +  V  
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVD 348

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            VTF T+++G+ Q  +      +  +M + 
Sbjct: 349 TVTFNTIIQGYFQAGRPDAAQEIFSRMGSR 378



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 107/223 (47%), Gaps = 1/223 (0%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +++A+ L+  M+  R  PS++ ++ LLS + +  N    + L   M++  +  D +T+  
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+ LC+    + A+ V   +     E  + T + LING C+  R+  A  L  +++   
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
              DVV  +T+I   CK G ++ A  L   ME        VT+ +L+ G   + ++S   
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            L+  M    +V + ++ ++ +++   ++ K+ E    +  ++
Sbjct: 230 RLMRDMVMRDIVPNVITFTA-LINAFVREGKFLEAKKFYEEMI 271



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 80/171 (46%)

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           NL +A+ L   M  +  +P    F+  +  + K+      + +F  +  C     + TYN
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +IN LC+  R   A  +  ++   G  PDVVT S++I+  C+  ++  A DL+  ME  
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            C    V + T++ GF +    +  +VL  +M  + +    ++ +S V  L
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGL 219


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 164/453 (36%), Positives = 256/453 (56%), Gaps = 11/453 (2%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
            TP  +TFN LINGLC EGR++EAA L  K+       +VVT+ T++NG+C+  +T  AL
Sbjct: 6   LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            L  +M        KPDVV Y++IID LCKDG    A+ L  +M ++ I PNV TYN +I
Sbjct: 66  NLLSKMEETH---IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 122

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            GFC    W +A+ L  +M++  + PDV+TFNA+I+ + K+GK+ +  +L + M+ R + 
Sbjct: 123 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 182

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PDTVTYNS++ GFC   R   A+ +F  M S     DV ++N +I+  C+ ++V++ + L
Sbjct: 183 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQL 238

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            RE+    +  +  TYNTL+ G  +V NL  A  L  +M  + V PD+ T    + G C+
Sbjct: 239 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 298

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           N  + EA+++F+ I+  K +L    YN +I+G+CK  ++  A  LF  L   G  PDV T
Sbjct: 299 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 358

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            + MI   C +  +  AN L   M+     P   T+ TL+RG ++  +  K + L+ +M 
Sbjct: 359 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 418

Query: 567 AEKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
           +        ++   V DL++    DK + + L+
Sbjct: 419 SNGFSGDAFTI-KMVADLITDGRLDKSFSDMLS 450



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 245/457 (53%), Gaps = 9/457 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+++  +P + +F  L+  L    +     +L  ++   GL  D+     ++N +CKMG 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T  A  +L ++  +   P+ V ++ +I+ LC +G   +A  LF ++      PNV T+N 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I+G C       A +L  +M+        PDV+T+N++I    K+G + +A++L  +M 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIERE---INPDVLTFNALISASVKEGKLFEAEKLCDEML 177

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R I P+ +TYNS+I GFC  + + +AK +F    D    PDVVTFN +I+  C+  ++D
Sbjct: 178 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVD 233

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +  +LL  + +RG+  +T TYN+L+ GFC V  ++ A++LF  M+S G   D  + NIL+
Sbjct: 234 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 293

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              C+++K+E+A+ L+  +   +I    + YN ++ G+ +   + +A  L   + ++ V 
Sbjct: 294 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 353

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD  T+   I G C    + +A  +F  +++   E    TYN LI G  K G +  + +L
Sbjct: 354 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 413

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA-NDLL 527
              ++  G   D  T   M+  L  +G++DK+ +D+L
Sbjct: 414 ISEMRSNGFSGDAFTIK-MVADLITDGRLDKSFSDML 449



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 206/400 (51%), Gaps = 9/400 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    +N   K G+  S  A+     M +    P +  ++ ++  L K+  +     
Sbjct: 44  DVVTYGTIVNGMCKMGDTKS--ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 101

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF  +   G+ P++F  N +I+  C  G  S A  +L  ++     P+ +TFN LI+   
Sbjct: 102 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 161

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            EG++ EA +L  ++      P+ VT+N++I G C+          F++  + F  +  P
Sbjct: 162 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR-------FDDAKHMFDLMASP 214

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           DVVT+N+IID  C+   VD+  +LL ++  R +  N  TYN+LI GFC VD+   A+ LF
Sbjct: 215 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 274

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM+ +GV PD +T N ++   C++ K+++   L E++    ++ DTV YN ++ G C  
Sbjct: 275 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 334

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            ++  A +LF S+   G   DV +YN++I+  C    + DA  L+ +M      P   TY
Sbjct: 335 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 394

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           NTL+ G  + G +  +++LI +M+ N    D+FT     D
Sbjct: 395 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 434



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 164/321 (51%), Gaps = 4/321 (1%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M +  + P VIT+N+LI G C      EA  L  +M+  G+  DVVT+  ++N  CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
                 LL  M +  + PD V Y++++D  C  G  S A+ LF  M+ KG   +V++YN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           +I+  C   +  DA  L R+M+   I P V+T+N L+S   + G L +A KL D+M    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + PD+ T+ + I G CK+    +A  +F  + +      + T+N +I+  C+  R+    
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGM 236

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           +L   +  +G + +  T +T+IH  C+   ++ A DL  +M +    P  +T   LL GF
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 550 VQNNKKSKVVVLLHKMAAEKL 570
            +N K  + + L   +   K+
Sbjct: 297 CENEKLEEALELFEVIQMSKI 317


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 166/497 (33%), Positives = 273/497 (54%), Gaps = 9/497 (1%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           +  +G  P++   N LI+ LCK      A  +   +     +P+ VT+N L++GL   G+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           +  A  LF+++ +     +V++FN L+ GLCR      AL+ F +M +     C P+V+T
Sbjct: 61  LERAMALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR----CSPNVIT 115

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+ +IDGLCK   V +A ELL  MK R  +P+VITY  L+ G C       A  +  EM+
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           D G  P++VT+N++++  C+  ++     L+  M  RG  P+ VTY +L+DG C VGR+ 
Sbjct: 176 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  +   M+ KG   D+  YN+LIN  CK  +V++++ L R  +S  I+P V+TY++++
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL +   L +A +L+  ++     PD   ++T IDGLCK G V EA  +++ +    C+
Sbjct: 296 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCD 355

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + TY+ LI+GLCK GR+  A  L  R+   G  P  +T +++I  LC    +D+A +L
Sbjct: 356 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 415

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           + +ME  NC PS VT+  L+ G  +  +     +   +   +  V+ D    S +++ L 
Sbjct: 416 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLK 475

Query: 587 KDKKYRECLNQFRHLLF 603
           K K     L++ RHL+ 
Sbjct: 476 KSKD----LHELRHLVL 488



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/472 (32%), Positives = 253/472 (53%), Gaps = 6/472 (1%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N   + A   F+ M  ++ SP M ++  LL  L +  + +  ++LF+ +       D+  
Sbjct: 23  NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH-DVIS 81

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            N+L+  LC+ G    A     ++   C +PN +T++ LI+GLC   R+ +A  L + + 
Sbjct: 82  FNILVTGLCRAGKIETALEFFRKMDDRC-SPNVITYSVLIDGLCKANRVSQAVELLESMK 140

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C P+V+T+  L++GLC+      A ++  EM++   A C P++VTYNS++ GLC+  
Sbjct: 141 ARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD---AGCVPNLVTYNSLLHGLCRAR 197

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V  A  L+  M  R   PNV+TY +LI G C V   K+A  +  +M+D G  PD++ +N
Sbjct: 198 RVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYN 257

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +IN  CK  ++D+   LL   +  G+ PD VTY+S++ G C   R+  A  L + + S+
Sbjct: 258 MLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSR 317

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  DV  Y+ LI+  CK  KV++A  LY  M  +     V+TY+TL+ GL + G + +A
Sbjct: 318 GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEA 377

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L+ +M      P + T+ + I GLC    + EA+++ + +    C     TYN LI+G
Sbjct: 378 HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHG 437

Query: 479 LCKMGRLKTAC-KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
           +C+M R+ +A    F  +   G IPD +T S ++  L K   + +   L+LD
Sbjct: 438 MCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 489



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 159/495 (32%), Positives = 253/495 (51%), Gaps = 10/495 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + ++  L+  L KN + D    LF+ + S    P +   N L++ L + G    A  
Sbjct: 7   EPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMA 66

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   +L    + + ++FN L+ GLC  G+I  A   F+K++   C PNV+T++ LI+GLC
Sbjct: 67  LFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVLIDGLC 124

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +      A++L E M       C PDV+TY  ++DGLCK+  V  A E+L +M D    P
Sbjct: 125 KANRVSQAVELLESMKARG---CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N++TYNSL+ G C      +A  L  +M   G  P+VVT+  +I+  CK G++     +L
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             MI +G  PD + YN L++G C   ++  +  L    VS G + DV +Y+ +I   C+ 
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            ++++A  L   + S    P VI Y+TL+ GL + G + +A  L + M  +    D  T+
Sbjct: 302 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTY 361

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           +T IDGLCK G V EA  +   +          TYN LI GLC +  L  A +L   ++ 
Sbjct: 362 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 421

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKAN-DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
               P  VT + +IH +C+  ++D A  D   +M     +P  +T+  LL G     KKS
Sbjct: 422 SNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGL----KKS 477

Query: 557 KVVVLLHKMAAEKLV 571
           K +  L  +  +++V
Sbjct: 478 KDLHELRHLVLDQMV 492


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 168/490 (34%), Positives = 261/490 (53%), Gaps = 12/490 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           S    ++T L+  L K K+ +  +    ++ S G  PD++    +I+ LC       A  
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            L  +     TPN VT+  LI+GLC  GR+ EA  L  K+    C P  VT+N+LI+GLC
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLC 126

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +      A  L EEMV    + C PD+ TY ++I G CK    D A  +  Q+  R   P
Sbjct: 127 KAERASEAYDLLEEMVY---SGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRL 316
           +V+TY+ LI G C     KEA  LF  M+ +G   P+ VT+N++I+  C+ GKMD+   L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           LE M + G +PD VTY +LM+GFC + R+  A +L   M  KG   DV ++  L++  C+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           + ++ DAV +  EM  +   P+V TYNT+L G  +   L +A K +  ++  D  P+  +
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVS 361

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR-L 495
           F   I GLCK     EA+++ +  R  +C   +  Y  +I+GLC+  ++  AC+++ + L
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +  G +P+ +T ST+I  LC  G +D+A   +     K CVP+  T+  L+  F + N+ 
Sbjct: 422 EEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRD 477

Query: 556 SKVVVLLHKM 565
                LL  M
Sbjct: 478 EDARELLDDM 487



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 156/472 (33%), Positives = 255/472 (54%), Gaps = 16/472 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+ F   M+     P + ++T ++  L    +        + + +  L P++    +L
Sbjct: 28  EQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVL 87

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G    A  +L ++ + C  P  VT+N LI+GLC   R  EA  L +++    C
Sbjct: 88  IDGLCKGGRVDEAVALLSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGC 146

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++ T+ TLI G C+++ +  AL++FE++V       +PDVVTY+ +IDGLCK+G + +
Sbjct: 147 IPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG---FRPDVVTYSCLIDGLCKEGRLKE 203

Query: 243 AKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           A +L  +M K  +  PN +TYNSLI GFC +    EA  L   M + G  PDVVT+  ++
Sbjct: 204 AIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLM 263

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N  CK  ++D    LL  M ++G+ PD VT+ SLMDG C   R+S A  +   M  K C 
Sbjct: 264 NGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS 323

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIR--PSVITYNTLLSGLFQVGNLGDAL 419
             VY+YN +++  C+  ++E+A    R+ + E +   P+V+++N ++ GL +V    +A+
Sbjct: 324 PTVYTYNTILDGYCRANQLEEA----RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAM 379

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-IRNCKCELRIETYNCLING 478
           +L+++ +     PD   + T IDGLC+   V EA +V++  +    C     TY+ LI G
Sbjct: 380 ELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITG 439

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           LC  G L  A         KG +P++ T + +I    K  + + A +LL DM
Sbjct: 440 LCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/418 (34%), Positives = 222/418 (53%), Gaps = 7/418 (1%)

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           VT+  LI GLC   R+ +A     K+      P+V T+  +I+ LC       A K  EE
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M N       P+VVTY  +IDGLCK G VD+A  LL +M+ + + P  +TYNSLI G C 
Sbjct: 72  MANRN---LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCK 127

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
            +   EA  L  EM+ +G  PD+ T+  +I   CK  K D   R+ E ++ RG  PD VT
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           Y+ L+DG C  GR+  A +LF  M+  G C  +  +YN LI+  C+  K+++A+ L   M
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
                 P V+TY TL++G  ++  L DA  L+++M    + PD  TF + +DGLC+   +
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            +AV +   +R   C   + TYN +++G C+  +L+ A K    L+     P+VV+ + M
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIM 365

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           I  LCK  +  +A +L+ +   + C P  V + T++ G  +  K  +   +  KM  E
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 232/423 (54%), Gaps = 8/423 (1%)

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
           +C  + VT+ +LI GLC+ +    AL    +MV++      PDV TY ++I  LC +  +
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKG---FHPDVYTYTAVIHALCVENRL 62

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A++ L +M +RN+ PNV+TY  LI G C      EA  L  +M    V P  VT+N++
Sbjct: 63  HEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSL 121

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  CK  +  +   LLE M+  G  PD  TY +L+ GFC   +   A  +F  +V++G 
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREML-SERIRPSVITYNTLLSGLFQVGNLGDAL 419
           R DV +Y+ LI+  CK+ ++++A+ L+  M+ S    P+ +TYN+L+SG  ++G + +A+
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L+++M      PD  T+ T ++G CK   + +A  +   +        + T+  L++GL
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C+  RL  A  +   ++ K   P V T +T++   C+  Q+++A   +L  E  +C P+ 
Sbjct: 302 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML--EEMDCPPNV 359

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
           V+F  ++RG  + N+ S+ + L+ + A  +    D+ + + V+D L ++KK  E    +R
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEE-ARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR 418

Query: 600 HLL 602
            +L
Sbjct: 419 KML 421



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 200/367 (54%), Gaps = 13/367 (3%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EA    + M+     P + ++T L+T   K+K+ D  + +F++L + G  PD+   + 
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 122 LINCLCKMGITSGAFVVLGRILR--SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           LI+ LCK G    A  + GR+++  SC  PNTVT+N LI+G C  G++ EA  L +++  
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCM-PNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+VVT+ TL+NG C+      A  L  +M  +      PDVVT+ S++DGLC++  
Sbjct: 250 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG---LTPDVVTFTSLMDGLCRENR 306

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +  A  +L +M+ ++ +P V TYN+++ G+C  +  +EA+   +E MD    P+VV+FN 
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNI 364

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK- 358
           MI   CK  +  +   L+E   +R  NPD V Y +++DG C   ++  A  ++  M+ + 
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  +  +Y+ LI   C    ++ A    R  + +   P++ TYN L+    +     DA
Sbjct: 425 GCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDA 480

Query: 419 LKLIDKM 425
            +L+D M
Sbjct: 481 RELLDDM 487



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 174/310 (56%), Gaps = 3/310 (0%)

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           N    D VT+ ++I   CK  ++++    L  M+ +G +PD  TY +++   C+  R+  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           AR+    M ++    +V +Y +LI+  CK  +V++AV L  +M  ++  P+ +TYN+L+S
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLIS 123

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GL +     +A  L+++M  +  +PD FT+ T I G CK+    +A++VF+ +       
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGP-IPDVVTCSTMIHWLCKEGQMDKANDL 526
            + TY+CLI+GLCK GRLK A  LF R+   G  +P+ VT +++I   C+ G+MD+A +L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           L  M      P  VT+ TL+ GF +  +      LL++M  + L    ++ +S ++D L 
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS-LMDGLC 302

Query: 587 KDKKYRECLN 596
           ++ +  + ++
Sbjct: 303 RENRLSDAVH 312



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 156/299 (52%), Gaps = 13/299 (4%)

Query: 64  EAVYFFDCMIKMKPS-PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           EA+  F  MIK     P   ++  L++   +  + D  ++L +R+   G  PD+     L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N  CK+     A+ +L ++ R   TP+ VTF  L++GLC E R+ +A  +  ++   +C
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 183 DPNVVTFNTLINGLCRTRNTLVALK-LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            P V T+NT+++G CR      A K + EEM       C P+VV++N +I GLCK     
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEM------DCPPNVVSFNIMIRGLCKVNRSS 376

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAM 300
           +A EL+ + + R  NP+V+ Y ++I G C      EA  ++ +M++  G  P+ +T++ +
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           I   C  G +D+    +E    +G  P+  TYN L+D F    R   AREL   MV +G
Sbjct: 437 ITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 137/263 (52%), Gaps = 10/263 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+   + M +   SP + ++T L+    K  + D    L  ++   GL PD+     L
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LC+    S A  +LG + R   +P   T+N +++G C   ++ EA +    L    C
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDC 355

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVV+FN +I GLC+   +  A++L EE        C PDVV Y ++IDGLC++  VD+
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR---CNPDVVMYTTVIDGLCREKKVDE 412

Query: 243 AKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           A  +  +M ++    PN ITY++LI G C       A+  +IE    G  P++ T+N +I
Sbjct: 413 ACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARG-YIE---KGCVPNIGTYNLLI 468

Query: 302 NYNCKDGKMDKVNRLLELMIQRG 324
           +   K  + +    LL+ M+QRG
Sbjct: 469 DAFRKANRDEDARELLDDMVQRG 491



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 136/283 (48%), Gaps = 41/283 (14%)

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           + +  C  D  +Y  LI   CK +++E A+    +M+S+   P V TY  ++  L     
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +A K +++M   ++ P+  T+   IDGLCK G V EAV +   +R  KC     TYN 
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNS 120

Query: 475 LINGLCKMGRLKTA--------------------------CK---------LFHRLQHKG 499
           LI+GLCK  R   A                          CK         +F +L  +G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDM-EAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
             PDVVT S +I  LCKEG++ +A DL   M ++ +C+P+ VT+ +L+ GF +  K  + 
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 559 VVLLHKMA---AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           + LL +MA   +   VV+  +L +    L   D  Y + LNQ 
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY-DLLNQM 282


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 146/395 (36%), Positives = 241/395 (61%), Gaps = 3/395 (0%)

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           L  ++    C P++VT+  ++NGLC+  +T +A  L  +M  E G + +P V+ YN+IID
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM--EQGKL-EPGVLIYNTIID 59

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           GLCK   +D A  L  +M+ + I PNV+TY+SLI   C    W +A  L  +M++  + P
Sbjct: 60  GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 119

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           DV TF+A+I+   K+GK+ +  +L + M++R ++P  VTY+SL++GFC+  R+  A+++F
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             MVSK C  DV +YN LI   CK ++VE+ + ++REM    +  + +TYN L+ GLFQ 
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G+   A ++  +M  + V P+  T+ T +DGLCKNG + +A+ VF+ ++  K E  I TY
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N +I G+CK G+++    LF  L  KG  PDVV  +TMI   C++G  ++A+ L  +M+ 
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
              +P+   + TL+R  +++  +     L+ +M +
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 394



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 232/430 (53%), Gaps = 7/430 (1%)

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           ++L  R+ + G  PDL    +++N LCK G T  AF +L ++ +    P  + +N +I+G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
           LC    + +A  LFK++      PNVVT+++LI+ LC       A +L  +M+       
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER---KI 117

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PDV T++++ID   K+G + +A++L  +M  R+I+P+++TY+SLI GFC  D   EAK 
Sbjct: 118 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 177

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +F  M+     PDVVT+N +I   CK  ++++   +   M QRG+  +TVTYN L+ G  
Sbjct: 178 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 237

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G    A+E+F  MVS G   ++ +YN L++  CK+ K+E A+ ++  +   ++ P++ 
Sbjct: 238 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 297

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYN ++ G+ + G + D   L   + L  V PD   + T I G C+ G   EA  +F+ +
Sbjct: 298 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           +          YN LI    + G  + + +L   ++  G   D  T   + + L  +G++
Sbjct: 358 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRL 416

Query: 521 DKANDLLLDM 530
           DK+    LDM
Sbjct: 417 DKS---FLDM 423



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 207/367 (56%), Gaps = 3/367 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M + K  PG+  +  ++  L K K  D  ++LFK + + G+ P++   + LI+CLC  G 
Sbjct: 42  MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 101

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            S A  +L  ++     P+  TF+ LI+    EG+++EA +L+ ++   + DP++VT+++
Sbjct: 102 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 161

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LING C       A ++FE MV++    C PDVVTYN++I G CK   V++  E+  +M 
Sbjct: 162 LINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 218

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R +  N +TYN LI G     D   A+ +F EM+ +GV P+++T+N +++  CK+GK++
Sbjct: 219 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 278

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K   + E + +  + P   TYN +++G C  G++    +LF ++  KG + DV +YN +I
Sbjct: 279 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 338

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  C+    E+A  L++EM  +   P+   YNTL+    + G+   + +LI +M+     
Sbjct: 339 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 398

Query: 432 PDSFTFA 438
            D+ T  
Sbjct: 399 GDASTIG 405



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 207/396 (52%), Gaps = 3/396 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
             D M+     P + ++ +++  L K    D   +L  ++    L P + + N +I+ LC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K      A  +   +      PN VT++ LI+ LC  GR  +A+RL   +     +P+V 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           TF+ LI+   +    + A KL++EMV        P +VTY+S+I+G C    +D+AK++ 
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRS---IDPSIVTYSSLINGFCMHDRLDEAKQMF 179

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M  ++  P+V+TYN+LI GFC     +E   +F EM   G+  + VT+N +I    + 
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G  D    + + M+  GV P+ +TYN+L+DG C  G++ +A  +F  +        +Y+Y
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           NI+I   CK  KVED   L+  +  + ++P V+ YNT++SG  + G+  +A  L  +M+ 
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +  +P+S  + T I    ++G    + ++ + +R+C
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 395



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 152/291 (52%)

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L   M+  G QPD+VT+  ++N  CK G  D    LL  M Q  + P  + YN+++DG 
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C    +  A  LF  M +KG R +V +Y+ LI+  C   +  DA  L  +M+  +I P V
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            T++ L+    + G L +A KL D+M    + P   T+++ I+G C +  + EA Q+F+ 
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           + +  C   + TYN LI G CK  R++   ++F  +  +G + + VT + +I  L + G 
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            D A ++  +M +    P+ +T+ TLL G  +N K  K +V+   +   K+
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 292



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 154/323 (47%), Gaps = 13/323 (4%)

Query: 24  CSFGRPPNPKTDLSSHHFK----DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           C++GR  +    LS    +    D  + +  ++   K G +   E +Y  D M+K    P
Sbjct: 97  CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY--DEMVKRSIDP 154

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
            + +++ L+     + + D    +F+ + S   FPD+   N LI   CK         V 
Sbjct: 155 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 214

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             + +     NTVT+N LI GL   G    A  +FK++      PN++T+NTL++GLC+ 
Sbjct: 215 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 274

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A+ +FE +     +  +P + TYN +I+G+CK G V+   +L   +  + + P+V
Sbjct: 275 GKLEKAMVVFEYLQR---SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 331

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           + YN++I GFC     +EA  LF EM ++G  P+   +N +I    +DG  +    L++ 
Sbjct: 332 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 391

Query: 320 MIQRGVNPDTVTY----NSLMDG 338
           M   G   D  T     N L DG
Sbjct: 392 MRSCGFAGDASTIGLVTNMLHDG 414



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 120/221 (54%)

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           L   MV+KGC+ D+ +Y +++N  CK    + A  L  +M   ++ P V+ YNT++ GL 
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           +  ++ DAL L  +M+   + P+  T+++ I  LC  G   +A ++   +   K    + 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           T++ LI+   K G+L  A KL+  +  +   P +VT S++I+  C   ++D+A  +   M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +K+C P  VT+ TL++GF +  +  + + +  +M+   LV
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 223



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 111/218 (50%), Gaps = 1/218 (0%)

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + L   M+++  +P ++TY  +++GL + G+   A  L++KM+   + P    + T IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LCK   + +A+ +F+ +        + TY+ LI+ LC  GR   A +L   +  +   PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           V T S +I    KEG++ +A  L  +M  ++  PS VT+ +L+ GF  +++  +   +  
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            M + K    D+   + ++    K K+  E +  FR +
Sbjct: 181 FMVS-KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 217


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/391 (40%), Positives = 237/391 (60%), Gaps = 12/391 (3%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P + +FN L+ GL +  +      L+ +M     A   PD+ T N + + LC    V + 
Sbjct: 88  PPISSFNRLLGGLAKINHYSQLFSLYNKMRL---AGLSPDLFTLNILANCLCNLNRVSEG 144

Query: 244 KELLLQMKDRNINPNVITYNSLI---CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
              +  +  R   P+++TYN+LI    G C V    EAK +F EM   G+ P+V++++++
Sbjct: 145 LAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSL 204

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI---SRARELFVSMVS 357
           ++  C  GK+++  RL   M+ +GV P+ V +N L+D  C  G+I   S AR+LF+SM S
Sbjct: 205 VHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPS 264

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           KGC H+  SY ILIN  CK  KVE+A+ LY EM     RP+V TY+TLL+GL Q G +GD
Sbjct: 265 KGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGD 324

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A KL   M+ + +  DS  +  ++DGLCKNG + EA+++F  +++   +L  E+Y+ LI+
Sbjct: 325 ANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLID 384

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL---LLDMEAKN 534
           GLCK G+++ A + F +L  +G  P+VVTC+ MIH  C+  Q+DKAN L   +  ME   
Sbjct: 385 GLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENG 444

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           C P  +T+ TLLRGF ++NK  +VV LLHKM
Sbjct: 445 CTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 138/414 (33%), Positives = 227/414 (54%), Gaps = 12/414 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GNI   +A +FFD M++  P P ++SF  LL  LAK   Y  + SL+ ++   GL PD
Sbjct: 65  KTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPD 124

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN---GLCAEGRIMEAAR 172
           LF LN+L NCLC +   S     +  ILR  + P+ VT+N LI    GLC  G   EA  
Sbjct: 125 LFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKE 184

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           +F+++      PNV+++++L++G C       + +LF EMV++     +P++V +N +ID
Sbjct: 185 IFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQG---VQPNLVQFNVLID 241

Query: 233 GLCKDGFV---DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
            LCK+G +     A++L L M  +    N I+Y  LI G+C +   +EA  L+ EM   G
Sbjct: 242 ILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVG 301

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
            +P+V T++ ++    + GK+   N+L  +M   G++ D+  Y   +DG C  G +  A 
Sbjct: 302 KRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAM 361

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           ELF  + S   + D  SY+ LI+  CK  KVE A   ++++  E ++P+V+T N ++ G 
Sbjct: 362 ELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGF 421

Query: 410 FQVGNLGDA---LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            +V  +  A    + ++KM+ N   PD  T+ T + G C++  + E V +   +
Sbjct: 422 CRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 152/308 (49%), Gaps = 12/308 (3%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            +EA   F+ M      P + S++ L+       + +    LF  +   G+ P+L   N+
Sbjct: 179 EDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNV 238

Query: 122 LINCLCKMG----ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           LI+ LCK G    ++S   + L    + C   N +++  LING C   ++ EA  L+ ++
Sbjct: 239 LIDILCKEGKIGDLSSARKLFLSMPSKGC-EHNEISYTILINGYCKIWKVEEAMNLYNEM 297

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 PNV T++TL+ GL +T     A KLF  M     ++   D   Y   +DGLCK+
Sbjct: 298 PQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISV---DSCIYVIFLDGLCKN 354

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G + +A EL  ++K  N   +  +Y+ LI G C     + A   F ++   G+QP+VVT 
Sbjct: 355 GVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTC 414

Query: 298 NAMINYNCKDGKMDKVNRL---LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           N MI+  C+  ++DK N L   +E M + G  PD +TYN+L+ GFC   ++     L   
Sbjct: 415 NIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHK 474

Query: 355 MVSKGCRH 362
           M  K  RH
Sbjct: 475 MF-KRMRH 481



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 151/306 (49%), Gaps = 9/306 (2%)

Query: 304 NCKDGKMDKVN--RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           NCK G +D +      +LM++    P   ++N L+ G   +   S+   L+  M   G  
Sbjct: 63  NCKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLS 122

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF---QVGNLGDA 418
            D+++ NIL N  C   +V + +     +L     P ++TYNTL+ GL+   +VG+  +A
Sbjct: 123 PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEA 182

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            ++ ++M+   ++P+  ++++ + G C  G + E+ ++F  + +   +  +  +N LI+ 
Sbjct: 183 KEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDI 242

Query: 479 LCKMGR---LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           LCK G+   L +A KLF  +  KG   + ++ + +I+  CK  ++++A +L  +M     
Sbjct: 243 LCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGK 302

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            P+  T+ TLL G +Q  K      L   M A  + V D  +    +D L K+    E +
Sbjct: 303 RPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISV-DSCIYVIFLDGLCKNGVLFEAM 361

Query: 596 NQFRHL 601
             F  L
Sbjct: 362 ELFNEL 367


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 168/533 (31%), Positives = 273/533 (51%), Gaps = 8/533 (1%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFKDGT-SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           N +C  GR  + +  +S   F   T +    +      G +   +A+  FD M+    SP
Sbjct: 138 NGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVP--DALAVFDDMLHRGCSP 195

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
            + +++ILL    K   Y   + L   + + G  PD+   N+LIN +C  G    A  +L
Sbjct: 196 SVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNIL 255

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             +      P+ VT+  ++  LC   R  E   LF ++    C P+ VTFNT++  LC+ 
Sbjct: 256 SDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQ 315

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A+K+ + M +E G  C PD+VTY+SI+DGLC  G VD A ELL ++K     P+ 
Sbjct: 316 GLVDRAIKVVDHM-SEHG--CIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDT 372

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           I Y +++ G C ++ W+ A+ L  EM+ +   PD VTFN +I   C+ G +D+  +++E 
Sbjct: 373 IAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQ 432

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M + G NPD VTYNS++DG C    I  A EL  ++ S GC+ D+ ++N L+   C   +
Sbjct: 433 MSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDR 492

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            EDA  L   M+     P   T+NT+++ L Q G L  A++ +  M  N  +P+  T+  
Sbjct: 493 WEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNI 552

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +D L K G   EA+++   + N   +L   TYN +I+ + K G+++ A  L   +   G
Sbjct: 553 VVDALLKAGKTQEALKLLSGMTNGTPDLI--TYNTVISNITKAGKMEEALDLLRVMVSNG 610

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             PD +T  ++ + +C+E   D+A  +L  ++     P    +  +L GF QN
Sbjct: 611 LSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQN 663



 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 158/510 (30%), Positives = 266/510 (52%), Gaps = 22/510 (4%)

Query: 103 LFKRLNSNGLFPD-------------LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP 149
           L KRL S G   D             +   N ++N  C+ G    A  ++  +    F P
Sbjct: 104 LIKRLCSGGRVADAERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMP---FPP 160

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +T TFN LI  LC  GR+ +A  +F  +    C P+VVT++ L++  C+      A+ L 
Sbjct: 161 DTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLL 220

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           +EM  +    C+PD+VTYN +I+ +C +G VD+A  +L  +      P+ +TY  ++   
Sbjct: 221 DEMRAKG---CEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSL 277

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C  + WKE + LF EM  N   PD VTFN ++   C+ G +D+  ++++ M + G  PD 
Sbjct: 278 CGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDI 337

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTY+S++DG C VGR+  A EL   + S GC+ D  +Y  ++   C  ++ E A  L  E
Sbjct: 338 VTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAE 397

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M+     P  +T+NT+++ L Q G +  A+K++++M  N   PD  T+ + IDGLC    
Sbjct: 398 MVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERC 457

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A+++   +++  C+  I T+N L+ GLC + R + A +L   + H    PD  T +T
Sbjct: 458 IDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNT 517

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I  LC++G + +A + L  M    C+P++ T+  ++   ++  K  + + LL  M    
Sbjct: 518 VITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG- 576

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
               DL   + V+  ++K  K  E L+  R
Sbjct: 577 --TPDLITYNTVISNITKAGKMEEALDLLR 604



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 236/455 (51%), Gaps = 11/455 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++T +L  L  ++++  V  LF  + SN   PD    N ++  LC+ G+   A  V
Sbjct: 265 PDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKV 324

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  +      P+ VT++ +++GLC  GR+ +A  L  +L  + C P+ + + T++ GLC 
Sbjct: 325 VDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCS 384

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A +L  EMV    + C PD VT+N++I  LC+ G VD+A +++ QM +   NP+
Sbjct: 385 IEQWEHAEELMAEMV---CSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPD 441

Query: 259 VITYNSLICGFC---CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           ++TYNS+I G C   C+DD  E   L   +   G +PD+VTFN ++   C   + +   +
Sbjct: 442 IVTYNSIIDGLCNERCIDDAME---LLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQ 498

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L+  M+     PD  T+N+++   C  G + +A E    M   GC  +  +YNI+++A  
Sbjct: 499 LMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALL 558

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K  K ++A+ L   M +    P +ITYNT++S + + G + +AL L+  M  N + PD+ 
Sbjct: 559 KAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTI 616

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+ +   G+C+      A+++   +++         YN ++ G C+  R   A   F  +
Sbjct: 617 TYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHM 676

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
              G +PD  T   ++  L  E  +D+A  LL+++
Sbjct: 677 VSSGCMPDESTYIILLEALAYECLLDEAKQLLVNL 711



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 190/395 (48%), Gaps = 5/395 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+   D M +    P + +++ +L  L    + D  V L  RL S G  PD      +
Sbjct: 319 DRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTV 378

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC +     A  ++  ++ S   P+ VTFN +I  LC +G +  A ++ ++++   C
Sbjct: 379 LKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGC 438

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P++VT+N++I+GLC  R    A++L   +   +G  CKPD+VT+N+++ GLC     + 
Sbjct: 439 NPDIVTYNSIIDGLCNERCIDDAMELLSNL-QSYG--CKPDIVTFNTLLKGLCSVDRWED 495

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++L++ M   +  P+  T+N++I   C      +A      M +NG  P+  T+N +++
Sbjct: 496 AEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVD 555

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K GK  +  +LL  M      PD +TYN+++      G++  A +L   MVS G   
Sbjct: 556 ALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSP 613

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +Y  L    C++   + A+ +   +    + P    YN +L G  Q      A+   
Sbjct: 614 DTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCF 673

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
             M  +  +PD  T+   ++ L     + EA Q+ 
Sbjct: 674 AHMVSSGCMPDESTYIILLEALAYECLLDEAKQLL 708



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 5/297 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+   + M +   +P + ++  ++  L   +  D  + L   L S G  PD+   N L
Sbjct: 424 DRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTL 483

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC +     A  ++  ++ S   P+  TFN +I  LC +G +++A    K +    C
Sbjct: 484 LKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGC 543

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN  T+N +++ L +   T  ALKL   M N       PD++TYN++I  + K G +++
Sbjct: 544 IPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG-----TPDLITYNTVISNITKAGKMEE 598

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL  M    ++P+ ITY SL  G C  D    A  +   + D G+ PD   +N ++ 
Sbjct: 599 ALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILL 658

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             C++ + D        M+  G  PD  TY  L++       +  A++L V++ S G
Sbjct: 659 GFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLG 715


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 167/490 (34%), Positives = 261/490 (53%), Gaps = 12/490 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           S    ++T L+  L K K+ +  +    ++ S G  PD++    +I+ LC       A  
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            L  +     TPN VT+  LI+GLC  GR+ EA  L  K+    C P  VT+N+LI+GLC
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLC 126

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +      A  L EEMV    + C PD+ TY ++I G CK    D A  +  Q+  R   P
Sbjct: 127 KAERASEAYDLLEEMVY---SGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRL 316
           +V+TY+ LI G C     KEA  LF  M+ +G   P+ VT+N++I+  C+ GKMD+   L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           LE M + G +PD VTY +LM+GFC + R+  A +L   M  KG   DV ++  L++  C+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           + ++ DAV +  EM  +   P+V TYNT+L G  +   L +A K +  ++  D  P+  +
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVS 361

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR-L 495
           F   I GLCK     EA+++ +  R  +C   +  Y  +I+GLC+  ++  AC+++ + L
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +  G +P+ +T ST++  LC  G +D+A   +     K CVP+  T+  L+  F + N+ 
Sbjct: 422 EEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRD 477

Query: 556 SKVVVLLHKM 565
                LL  M
Sbjct: 478 EDARELLDDM 487



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 155/472 (32%), Positives = 255/472 (54%), Gaps = 16/472 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+ F   M+     P + ++T ++  L    +        + + +  L P++    +L
Sbjct: 28  EQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVL 87

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G    A  +L ++ + C  P  VT+N LI+GLC   R  EA  L +++    C
Sbjct: 88  IDGLCKGGRVDEAVALLSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGC 146

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++ T+ TLI G C+++ +  AL++FE++V       +PDVVTY+ +IDGLCK+G + +
Sbjct: 147 IPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG---FRPDVVTYSCLIDGLCKEGRLKE 203

Query: 243 AKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           A +L  +M K  +  PN +TYNSLI GFC +    EA  L   M + G  PDVVT+  ++
Sbjct: 204 AIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLM 263

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N  CK  ++D    LL  M ++G+ PD VT+ SLMDG C   R+S A  +   M  K C 
Sbjct: 264 NGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS 323

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIR--PSVITYNTLLSGLFQVGNLGDAL 419
             VY+YN +++  C+  ++E+A    R+ + E +   P+V+++N ++ GL +V    +A+
Sbjct: 324 PTVYTYNTILDGYCRANQLEEA----RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAM 379

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-IRNCKCELRIETYNCLING 478
           +L+++ +     PD   + T IDGLC+   V EA +V++  +    C     TY+ L+ G
Sbjct: 380 ELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTG 439

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           LC  G L  A         KG +P++ T + +I    K  + + A +LL DM
Sbjct: 440 LCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/418 (34%), Positives = 222/418 (53%), Gaps = 7/418 (1%)

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           VT+  LI GLC   R+ +A     K+      P+V T+  +I+ LC       A K  EE
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M N       P+VVTY  +IDGLCK G VD+A  LL +M+ + + P  +TYNSLI G C 
Sbjct: 72  MANRN---LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCK 127

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
            +   EA  L  EM+ +G  PD+ T+  +I   CK  K D   R+ E ++ RG  PD VT
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           Y+ L+DG C  GR+  A +LF  M+  G C  +  +YN LI+  C+  K+++A+ L   M
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
                 P V+TY TL++G  ++  L DA  L+++M    + PD  TF + +DGLC+   +
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            +AV +   +R   C   + TYN +++G C+  +L+ A K    L+     P+VV+ + M
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIM 365

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           I  LCK  +  +A +L+ +   + C P  V + T++ G  +  K  +   +  KM  E
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 232/423 (54%), Gaps = 8/423 (1%)

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
           +C  + VT+ +LI GLC+ +    AL    +MV++      PDV TY ++I  LC +  +
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKG---FHPDVYTYTAVIHALCVENRL 62

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A++ L +M +RN+ PNV+TY  LI G C      EA  L  +M    V P  VT+N++
Sbjct: 63  HEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSL 121

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  CK  +  +   LLE M+  G  PD  TY +L+ GFC   +   A  +F  +V++G 
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREML-SERIRPSVITYNTLLSGLFQVGNLGDAL 419
           R DV +Y+ LI+  CK+ ++++A+ L+  M+ S    P+ +TYN+L+SG  ++G + +A+
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L+++M      PD  T+ T ++G CK   + +A  +   +        + T+  L++GL
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C+  RL  A  +   ++ K   P V T +T++   C+  Q+++A   +L  E  +C P+ 
Sbjct: 302 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML--EEMDCPPNV 359

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
           V+F  ++RG  + N+ S+ + L+ + A  +    D+ + + V+D L ++KK  E    +R
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEE-ARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR 418

Query: 600 HLL 602
            +L
Sbjct: 419 KML 421



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 200/367 (54%), Gaps = 13/367 (3%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EA    + M+     P + ++T L+T   K+K+ D  + +F++L + G  PD+   + 
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 122 LINCLCKMGITSGAFVVLGRILR--SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           LI+ LCK G    A  + GR+++  SC  PNTVT+N LI+G C  G++ EA  L +++  
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCM-PNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+VVT+ TL+NG C+      A  L  +M  +      PDVVT+ S++DGLC++  
Sbjct: 250 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG---LTPDVVTFTSLMDGLCRENR 306

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +  A  +L +M+ ++ +P V TYN+++ G+C  +  +EA+   +E MD    P+VV+FN 
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNI 364

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK- 358
           MI   CK  +  +   L+E   +R  NPD V Y +++DG C   ++  A  ++  M+ + 
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  +  +Y+ L+   C    ++ A    R  + +   P++ TYN L+    +     DA
Sbjct: 425 GCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDA 480

Query: 419 LKLIDKM 425
            +L+D M
Sbjct: 481 RELLDDM 487



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 164/293 (55%), Gaps = 2/293 (0%)

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           N    D VT+ ++I   CK  ++++    L  M+ +G +PD  TY +++   C+  R+  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           AR+    M ++    +V +Y +LI+  CK  +V++AV L  +M  ++  P+ +TYN+L+S
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLIS 123

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GL +     +A  L+++M  +  +PD FT+ T I G CK+    +A++VF+ +       
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGP-IPDVVTCSTMIHWLCKEGQMDKANDL 526
            + TY+CLI+GLCK GRLK A  LF R+   G  +P+ VT +++I   C+ G+MD+A +L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           L  M      P  VT+ TL+ GF +  +      LL++M  + L    ++ +S
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 156/299 (52%), Gaps = 13/299 (4%)

Query: 64  EAVYFFDCMIKMKPS-PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           EA+  F  MIK     P   ++  L++   +  + D  ++L +R+   G  PD+     L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N  CK+     A+ +L ++ R   TP+ VTF  L++GLC E R+ +A  +  ++   +C
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 183 DPNVVTFNTLINGLCRTRNTLVALK-LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            P V T+NT+++G CR      A K + EEM       C P+VV++N +I GLCK     
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEM------DCPPNVVSFNIMIRGLCKVNRSS 376

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAM 300
           +A EL+ + + R  NP+V+ Y ++I G C      EA  ++ +M++  G  P+ +T++ +
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +   C  G +D+    +E    +G  P+  TYN L+D F    R   AREL   MV +G
Sbjct: 437 VTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 137/263 (52%), Gaps = 10/263 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+   + M +   SP + ++T L+    K  + D    L  ++   GL PD+     L
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LC+    S A  +LG + R   +P   T+N +++G C   ++ EA +    L    C
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDC 355

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVV+FN +I GLC+   +  A++L EE        C PDVV Y ++IDGLC++  VD+
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR---CNPDVVMYTTVIDGLCREKKVDE 412

Query: 243 AKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           A  +  +M ++    PN ITY++L+ G C       A+  +IE    G  P++ T+N +I
Sbjct: 413 ACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARG-YIE---KGCVPNIGTYNLLI 468

Query: 302 NYNCKDGKMDKVNRLLELMIQRG 324
           +   K  + +    LL+ M+QRG
Sbjct: 469 DAFRKANRDEDARELLDDMVQRG 491



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 136/283 (48%), Gaps = 41/283 (14%)

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           + +  C  D  +Y  LI   CK +++E A+    +M+S+   P V TY  ++  L     
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +A K +++M   ++ P+  T+   IDGLCK G V EAV +   +R  KC     TYN 
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNS 120

Query: 475 LINGLCKMGRLKTA--------------------------CK---------LFHRLQHKG 499
           LI+GLCK  R   A                          CK         +F +L  +G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDM-EAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
             PDVVT S +I  LCKEG++ +A DL   M ++ +C+P+ VT+ +L+ GF +  K  + 
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 559 VVLLHKMA---AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           + LL +MA   +   VV+  +L +    L   D  Y + LNQ 
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY-DLLNQM 282


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 172/553 (31%), Positives = 287/553 (51%), Gaps = 25/553 (4%)

Query: 72  MIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG 130
           ++K  P  P +  F  L+  L + ++ D    LF  +  +G   D+   N+L+  LCK+ 
Sbjct: 300 LLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359

Query: 131 ITSGAF--VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVV 187
               A+  V L R    C +PN VTF+ LI GLC  GR+ +A  +++++  V    PN  
Sbjct: 360 RIPEAYRHVELMRRTEGC-SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRF 418

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNE------------------FGAICKPDVVTYNS 229
           T+  L+ GLC+  ++    + FE+M+                       +C+P +VTYN+
Sbjct: 419 TYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNT 478

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ++ GL K G V  A  LL  M +  ++P+VIT+NS++ G C      +A  +F   ++ G
Sbjct: 479 LVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 538

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
            +P+VVT++ +I+   K  KMD+  +LL  M++ G   +TVTY++++DG   VGR+  A 
Sbjct: 539 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 598

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            +   M   GC  D  +YN LI+   K Q++ +AV L REML     PSV+TY TL  GL
Sbjct: 599 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 658

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELR 468
            + G   +A++++D M      P++ T+++ +DGLCK G V EA+  F+ + R+      
Sbjct: 659 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 718

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           +  Y+ LI+GLCK GR+  A +   R+   G IPDVVT S +I+ LC  G++D   +L  
Sbjct: 719 VIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFC 778

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            M  + C      +  ++  +    + S    LL +M    +  + ++    V+  L  +
Sbjct: 779 GMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVT-HGIVIKALCGN 837

Query: 589 KKYRECLNQFRHL 601
            +  E ++ F  +
Sbjct: 838 DRIDEAVSYFHSI 850



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 167/547 (30%), Positives = 271/547 (49%), Gaps = 42/547 (7%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            KSG +   +A+   + MI+   SP + +F  +L  L K ++     ++FKR    G  P+
Sbjct: 485  KSGMV--RDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPN 542

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +   + LI+ L KM     A  +L +++      NTVT++ +++GL   GR+ +A  + +
Sbjct: 543  VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR 602

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            ++    C P+ VT+NTLI+G  + +    A+ L  EM+    A   P VVTY ++  GLC
Sbjct: 603  QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE---AGFHPSVVTYTTLCHGLC 659

Query: 236  KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM-DNGVQPDV 294
            + G  D+A E+L  M  R   PN ITY+S++ G C      EA   F +M  D  V P V
Sbjct: 660  RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719

Query: 295  VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            + ++A+I+  CK G++D+    LE MI+ G  PD VT++ L++G C  GRI    ELF  
Sbjct: 720  IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779

Query: 355  MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS--------------------ER 394
            M  +GC+ D+Y+YN +INA C   +   A  L  EM +                    +R
Sbjct: 780  MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839

Query: 395  IRPSV-------------ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            I  +V             I+YNTL++ L        AL+L+  M  +   PD+  + T +
Sbjct: 840  IDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVM 899

Query: 442  DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            DGL K G    A ++ Q +R+      + TY  +I+GL K  +L  AC  F  +  K   
Sbjct: 900  DGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLK 959

Query: 502  PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            PD +  S++I   CK  ++D A  LL    +    P+   + T++    +N    K + +
Sbjct: 960  PDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVDSLCKNRGTDKALEV 1016

Query: 562  LHKMAAE 568
            + +M ++
Sbjct: 1017 IREMKSK 1023



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 250/503 (49%), Gaps = 7/503 (1%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +EA+     M+++       +++ ++  L K  + +  V + +++   G  PD    N L
Sbjct: 560  DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL 619

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I+   K      A  +L  +L + F P+ VT+  L +GLC  GR  EA  +   +    C
Sbjct: 620  IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 679

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             PN +T++++++GLC+      AL  FE+M  +   +  P V+ Y+++IDGLCK G +D+
Sbjct: 680  APNAITYSSIVDGLCKAGRVTEALGYFEKMARD--EVVAPHVIAYSALIDGLCKAGRIDE 737

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            A E L +M      P+V+T++ LI G C          LF  M + G + D+  +NAMIN
Sbjct: 738  AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMIN 797

Query: 303  YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              C  G+      LLE M   G+  +TVT+  ++   C   RI  A   F S + + CR 
Sbjct: 798  AYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHS-IPEDCRD 856

Query: 363  DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            ++ SYN LI +    ++ E A+ L R M+++   P    Y T++ GLF+ G+   A KL+
Sbjct: 857  EI-SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLL 915

Query: 423  DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             +M+     PD  T+   I GL K   +  A   F+ +     +     Y+ LI+  CK 
Sbjct: 916  QEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKA 975

Query: 483  GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             ++  A KL   L+  G  P +   STM+  LCK    DKA +++ +M++KNC P    +
Sbjct: 976  DKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIW 1032

Query: 543  CTLLRGFVQNNKKSKVVVLLHKM 565
             +L   +V   +  + V L++ +
Sbjct: 1033 TSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 164/575 (28%), Positives = 270/575 (46%), Gaps = 90/575 (15%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P   ++  L+  L    +     SL +R+ +NG  P+L    L+I  LCK G    AF 
Sbjct: 68  APNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFR 127

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V+  ++   F P+      L++ LC  GR+ EA   F+++ +    P+ VT+NT+++GL 
Sbjct: 128 VVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLY 187

Query: 198 RTRNTLVALKLFEEMVNEF----------------------GAI----------CKPDVV 225
           +      A  + + +   F                      GA             P+ V
Sbjct: 188 KAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTV 247

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNIN----------------------------- 256
           TY+++IDGLCK G +D A  LL   +D+N                               
Sbjct: 248 TYDALIDGLCKAGKLDIALGLL---RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM 304

Query: 257 ---PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
              PNV+ +NSL+ G C      EA  LF  M ++G   DV+T+N ++   CK  ++ + 
Sbjct: 305 PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEA 364

Query: 314 NRLLELMIQ-RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS-KGCRHDVYSYNILI 371
            R +ELM +  G +P+ VT+++L+ G C  GR+++A E++  MV+ +G   + ++Y  L+
Sbjct: 365 YRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLL 424

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPS---------------------VITYNTLLSGLF 410
              CK          + +ML    R S                     ++TYNTL++GL 
Sbjct: 425 EGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLS 484

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + G + DAL L++ M  + + PD  TF + +DGLCK   +L+A  VF+      C   + 
Sbjct: 485 KSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVV 544

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY+ LI+GL KM ++  A +L  ++   G   + VT ST++  L K G+M+ A  +L  M
Sbjct: 545 TYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQM 604

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
               C+P  VT+ TL+ GF +  +  + V LL +M
Sbjct: 605 RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 639



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 242/473 (51%), Gaps = 12/473 (2%)

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N+LIN LCK G    AF    + ++  F P  VT++ +I+GLC +  + +  +L +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++    C PN VT+NTL+N L        A  L E M       C P+++T+  II GLC
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANG---CPPELITFGLIIKGLC 117

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G ++ A  ++ +M DR   P+V  +  L+   C +    EA   F +++  G  PD V
Sbjct: 118 KEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAV 177

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N M++   K G+++    +L+L+ +   +P   T+   +DG    G ++ A E F SM
Sbjct: 178 TYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              G   +  +Y+ LI+  CK  K++ A+ L R+  S+     +  +++LL GL Q   L
Sbjct: 238 PQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQ---AGMFAFSSLLHGLCQAHRL 294

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A++L+  M     VP+   F + ++GLC+   V EA ++F  ++   C   + TYN L
Sbjct: 295 EEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNIL 351

Query: 476 INGLCKMGRLKTACKLFHRLQH-KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA-K 533
           + GLCK+ R+  A +    ++  +G  P+VVT ST+I  LC  G++++A ++   M A +
Sbjct: 352 LKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVE 411

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM-AAEKLVVSDLSLSSKVVDLL 585
              P+  T+  LL G  +     ++     +M   E    S   + S  VD L
Sbjct: 412 GISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFL 464



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 164/608 (26%), Positives = 281/608 (46%), Gaps = 66/608 (10%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K+G +   +A   F   I+    P + +++ ++  L ++ + D    L + +  
Sbjct: 7   LINGLCKAGRVC--DAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAG 64

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G  P+    N L+N L   G    AF +L R+  +   P  +TF  +I GLC EG I  
Sbjct: 65  RGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEA 124

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE-MVNEFGAICKPDVVTYN 228
           A R+  ++      P+V     L++ LC       A   F++ ++  F     PD VTYN
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGF----TPDAVTYN 180

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           +++DGL K G ++ A  +L  + +   +P V T+   + G     +   A   F  M   
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 289 GVQPDVVTFNAMINYNCKDGKMD-----------------------------KVNRLLEL 319
           GV P+ VT++A+I+  CK GK+D                             ++   ++L
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQL 300

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           +      P+ V +NSLM+G C   R+  A ELF  M   GC  DV +YNIL+   CK ++
Sbjct: 301 LKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRR 360

Query: 380 VEDAVCLYREM----LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDS 434
           + +A   YR +     +E   P+V+T++TL+ GL   G +  A ++ ++M  +  + P+ 
Sbjct: 361 IPEA---YRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNR 417

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAI--RNCK-------------------CELRIETYN 473
           FT+A  ++GLCK G      Q F+ +  R  +                   C   + TYN
Sbjct: 418 FTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYN 477

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            L+ GL K G ++ A  L   +   G  PDV+T ++++  LCKE ++  A+++      +
Sbjct: 478 TLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 537

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            C P+ VT+ TL+ G  +  K  + + LL KM       + ++ S+ VVD L K  +  +
Sbjct: 538 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST-VVDGLLKVGRMED 596

Query: 594 CLNQFRHL 601
            +   R +
Sbjct: 597 AVVVLRQM 604



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 212/434 (48%), Gaps = 9/434 (2%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            EAV     M++    P + ++T L   L ++ ++D  V +   + + G  P+    + ++
Sbjct: 631  EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 690

Query: 124  NCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            + LCK G  + A     ++ R     P+ + ++ LI+GLC  GRI EA    +++     
Sbjct: 691  DGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGR 750

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             P+VVTF+ LINGLC        L+LF  M  E G  CK D+  YN++I+  C  G    
Sbjct: 751  IPDVVTFSILINGLCDAGRIDTGLELFCGMA-ERG--CKADIYAYNAMINAYCLKGEFSA 807

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            A  LL +MK   I  N +T+  +I   C  D   EA   F  + ++    D +++N +I 
Sbjct: 808  AYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC--RDEISYNTLIT 865

Query: 303  YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                  + ++   LL  M+  G +PD   Y ++MDG    G    A +L   M S+G   
Sbjct: 866  SLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSP 925

Query: 363  DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            D+ +Y I+I+   K +++  A   + EML + ++P  I Y++L+    +   + DA KL 
Sbjct: 926  DLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL- 984

Query: 423  DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
              ++ + + P    ++T +D LCKN    +A++V + +++  CE  I  +  L       
Sbjct: 985  --LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAE 1042

Query: 483  GRLKTACKLFHRLQ 496
            GR+  A KL + LQ
Sbjct: 1043 GRVDEAVKLVNDLQ 1056



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 183/396 (46%), Gaps = 36/396 (9%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF-PDLFVLNL 121
            +EAV   D M     +P   +++ ++  L K  +    +  F+++  + +  P +   + 
Sbjct: 665  DEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSA 724

Query: 122  LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            LI+ LCK G    A+  L R++R+   P+ VTF+ LINGLC  GRI     LF  +    
Sbjct: 725  LIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERG 784

Query: 182  CDPNVVTFNTLINGLCRTRNTLVALKLFEEM----------------------------V 213
            C  ++  +N +IN  C       A  L EEM                            V
Sbjct: 785  CKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAV 844

Query: 214  NEFGAI---CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
            + F +I   C+ D ++YN++I  L      ++A ELL  M     +P+   Y +++ G  
Sbjct: 845  SYFHSIPEDCR-DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLF 903

Query: 271  CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                 + A  L  EM   G  PD+ T+  MI+   K  ++       E M+++ + PD +
Sbjct: 904  KAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAI 963

Query: 331  TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
             Y+SL+D FC   ++  A +L   + S G    +  Y+ ++++ CK++  + A+ + REM
Sbjct: 964  VYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREM 1020

Query: 391  LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
             S+   P +  + +L +     G + +A+KL++ +Q
Sbjct: 1021 KSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 169/495 (34%), Positives = 266/495 (53%), Gaps = 46/495 (9%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P+P +  F  +   L K   + TV+SL  ++   G+  DL  LN+L+NC C +G      
Sbjct: 4   PTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLG------ 57

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
                                   +C   ++ E       +       N V++ TLI+GL
Sbjct: 58  -----------------------QVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGL 94

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+   T  A+++     N  G + +P+VV Y++II  LCKD  V  A +L  QM  + I+
Sbjct: 95  CKAGETRAAMQVLR---NIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRIS 151

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+VITYN+L+ G   V   KEA  LF +M+   ++PD+ TFN +++  CK+G+M K   +
Sbjct: 152 PDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNV 211

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L +MI++ V+PD +TYNSLMDG+ LV + ++A  +F +M  +G   DV+SY+++IN  CK
Sbjct: 212 LAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCK 271

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
            + V++AV L +EM S+ + P+ +TY++L+ GL + G + DA  L+++M       D  T
Sbjct: 272 TKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVIT 331

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + + +D LCKN  V +A+ +   I++   +  I TY  L++GLCK GRLK A +++  L 
Sbjct: 332 YNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILL 391

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG   D +               DKA  LL  ME   C P+ VTF  L+R   +N+   
Sbjct: 392 IKGYHLDSL--------------FDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMND 437

Query: 557 KVVVLLHKMAAEKLV 571
           K V LL +M A  L+
Sbjct: 438 KAVELLREMIARGLL 452



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 202/410 (49%), Gaps = 24/410 (5%)

Query: 51  LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           LND+ K       E ++F D +I         S+  L+  L K  +    + + + ++  
Sbjct: 61  LNDKVK-------ETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGL 113

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
            + P++ + + +I  LCK  +   AF +  ++L    +P+ +T+N L+ G    GR+ EA
Sbjct: 114 LVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEA 173

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             LF ++ +    P++ TFN L++GLC+      A  +   M+ +      PDV+TYNS+
Sbjct: 174 VGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQS---VDPDVITYNSL 230

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           +DG       +KA  +   M  R + P+V +Y+ +I G C      EA  L  EM    +
Sbjct: 231 MDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSM 290

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P+ VT++++I+   K G++     L+  M  RG   D +TYNSL+D  C   ++ +A  
Sbjct: 291 APNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAIT 350

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           L   +  +G + D+Y+Y IL++  CK+ +++DA  +Y+ +L +            L  LF
Sbjct: 351 LLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYH---------LDSLF 401

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
                  AL L+ KM+ N   P+  TF   I  L +N    +AV++ + +
Sbjct: 402 D-----KALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREM 446



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 165/307 (53%), Gaps = 6/307 (1%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM--- 310
           N  P +  +  +      ++ +     L  +M   G+Q D+V  N ++N  C  G++   
Sbjct: 3   NPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLN 62

Query: 311 DKVNRLLEL---MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           DKV   L     +I +G   + V+Y +L+DG C  G    A ++  ++     + +V  Y
Sbjct: 63  DKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMY 122

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           + +I + CKD+ V DA  LY +ML +RI P VITYNTL+ G   VG L +A+ L ++M L
Sbjct: 123 STIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLL 182

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
            ++ PD +TF   +DGLCK G + +A  V   +     +  + TYN L++G   + +   
Sbjct: 183 KNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENK 242

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  +F+ +  +G  PDV + S MI+ LCK   +D+A +LL +M +K+  P+ VT+ +L+ 
Sbjct: 243 ATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLID 302

Query: 548 GFVQNNK 554
           G  ++ +
Sbjct: 303 GLHKSGR 309



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 17/254 (6%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MIK    P + ++  L+      KQ +    +F  +   G+ PD+   +++IN LCK  +
Sbjct: 215 MIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKM 274

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L  +      PNTVT++ LI+GL   GRI +A  L  +++      +V+T+N+
Sbjct: 275 VDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNS 334

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++ LC+      A+ L  ++ ++     +PD+ TY  ++DGLCK+G +  A+E+   + 
Sbjct: 335 LLDALCKNHQVDKAITLLTKIKDQG---IQPDIYTYTILVDGLCKNGRLKDAQEVYQIL- 390

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                        LI G+     + +A  L  +M DNG  P+ VTF  +I    ++   D
Sbjct: 391 -------------LIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMND 437

Query: 312 KVNRLLELMIQRGV 325
           K   LL  MI RG+
Sbjct: 438 KAVELLREMIARGL 451


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 158/479 (32%), Positives = 258/479 (53%), Gaps = 6/479 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           +P + +++ ++    K  + D    + + +   +G+ PD+     +++ LC+ G    A 
Sbjct: 42  APDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRAC 101

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            ++  +      P+  TF+ LI G C   ++ EA +L+K++   +C  + V+ + LI GL
Sbjct: 102 EMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGL 161

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR R    A +LF+EM        KPDVVTY ++IDG CK G ++KA ++L  M+ R   
Sbjct: 162 CRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCV 221

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PNV+TY+SL+ G C   D  +A  LF  M   G  P+VVT+  +I+  C   K+D    L
Sbjct: 222 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 281

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           ++ M       DTV+YN+L+DG+C +GRI  A++LF  M +K C  D  +Y  L+   C 
Sbjct: 282 MDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCN 341

Query: 377 DQKVEDAVCLYREM-LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
             ++E+A  L   M  +  I P V+TY+ +++G  +     +A + I +M   +V P++ 
Sbjct: 342 ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAV 401

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+++ IDGLCK G V  A++V + +        + TY  +I GLC   R + A  L   +
Sbjct: 402 TYSSLIDGLCKAGRVNHAMEVLKNVDKPD----VVTYTIVIEGLCGTDRTEEALTLLEEM 457

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            +K   P V T +++I  LC+ G MD+A  LL+ M A    P  VT+ TLL GF +  +
Sbjct: 458 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 516



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 244/456 (53%), Gaps = 18/456 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLN--SNGLF-PDLFVLNLLINCLCKMGITSGAFVVL 139
           S + L+T L + ++      LF+ +    +G + PD+     LI+  CK G    A  +L
Sbjct: 153 SSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKML 212

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
           G +      PN VT++ L++GLC  G + +A  LF+++    C PNVVT+ TLI+GLC  
Sbjct: 213 GVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAA 272

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A  L +EM       C  D V+YN+++DG C+ G +++AK+L  +M  ++  P+ 
Sbjct: 273 HKVDAARLLMDEMT---ATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDR 329

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEM-MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           ITY  L+ GFC     +EA+ L   M    G+ PDVVT++ ++    +  +  +    ++
Sbjct: 330 ITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQ 389

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MI R V P+ VTY+SL+DG C  GR++ A E+  ++     + DV +Y I+I   C   
Sbjct: 390 EMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTD 445

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           + E+A+ L  EM+++R+ PSV T+N+++  L ++G++ +A KL+  M  + + P   T+ 
Sbjct: 446 RTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 505

Query: 439 TYIDGLCKNGFVLEAVQVFQAIR------NCKCELRIE-TYNCLINGLCKMGRLKTACKL 491
           T ++G  + G +  A ++F+ +R      +    L  E  ++ LI GLCK   +  A  +
Sbjct: 506 TLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAV 565

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
              L+ +   P    C  ++  L + G+ ++A  L+
Sbjct: 566 VEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLI 601



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 230/417 (55%), Gaps = 7/417 (1%)

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTRN 201
           +R    PN  T+N ++NGLC      +A  + K++ +  +  P++VT++T+ING C+   
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A ++  EMV   G    PDVVTY S++DGLC+DG +D+A E++ +MK + + P+  T
Sbjct: 61  MDRACEILREMVTRDGM--APDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFT 118

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +++LI G+C      EA  L+ E++ +  + D V+ +A+I   C++ ++ +   L + M 
Sbjct: 119 FSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEME 178

Query: 322 QR---GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            R      PD VTY +L+DGFC  G + +A ++   M  + C  +V +Y+ L++  CK  
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++ A+ L+R M S+   P+V+TY TL+ GL     +  A  L+D+M       D+ ++ 
Sbjct: 239 DLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYN 298

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +DG C+ G + EA Q+F+ +    C     TY CL+ G C   RL+ A  L   ++  
Sbjct: 299 ALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 358

Query: 499 GPI-PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             I PDVVT S ++    +  +  +A + + +M A+N  P+ VT+ +L+ G  +  +
Sbjct: 359 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 415



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 255/499 (51%), Gaps = 13/499 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           +P   ++ +++  L K +       + K + +   + PDL   + +IN  CK G    A 
Sbjct: 6   APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 137 VVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
            +L  ++ R    P+ VT+  +++GLC +G++  A  + +++ +   +P+  TF+ LI G
Sbjct: 66  EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 125

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK---D 252
            C  R    ALKL++E++    + C+ D V+ +++I GLC++  + +A EL  +M+   D
Sbjct: 126 WCNARKVDEALKLYKEILT---SSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRED 182

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
               P+V+TY +LI GFC   + ++A  +   M      P+VVT++++++  CK G +D+
Sbjct: 183 GAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQ 242

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              L   M  +G  P+ VTY +L+ G C   ++  AR L   M +  C  D  SYN L++
Sbjct: 243 ALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLD 302

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ-LNDVV 431
             C+  ++E+A  L++EM ++   P  ITY  L+ G      L +A  L++ M+    + 
Sbjct: 303 GYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID 362

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD  T++  + G  +    +EA +  Q +          TY+ LI+GLCK GR+  A ++
Sbjct: 363 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEV 422

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              +      PDVVT + +I  LC   + ++A  LL +M  K   PS  TF +++    +
Sbjct: 423 LKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCR 478

Query: 552 NNKKSKVVVLLHKMAAEKL 570
                +   LL  MAA  L
Sbjct: 479 LGDMDEAWKLLVAMAAHGL 497



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 219/386 (56%), Gaps = 5/386 (1%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKD-RNINPNVITYNSLICGFCCVDDWKEAKC 280
           P+  TYN +++GLCK     KA E+L +M+D +++ P+++TY+++I GFC   +   A  
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 281 LFIEMMD-NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
           +  EM+  +G+ PDVVT+ ++++  C+DGKMD+   ++  M  +GV PD  T+++L+ G+
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER---IR 396
           C   ++  A +L+  +++  CR D  S + LI   C+++++ +A  L++EM        +
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P V+TY  L+ G  + GNL  A+K++  M+    VP+  T+++ + GLCK G + +A+ +
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F+ + +  C   + TY  LI+GLC   ++  A  L   +       D V+ + ++   C+
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            G++++A  L  +M AK+C+P  +T+  L+RGF   ++  +   LL  M     +  D+ 
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 577 LSSKVVDLLSKDKKYRECLNQFRHLL 602
             S VV   S+ K++ E     + ++
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMI 392



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 226/423 (53%), Gaps = 8/423 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T+N ++NGLC+ R T  A ++ +EM +  G    PD+VTY+++I+G CK G +D+A
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRD--GKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 244 KELLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            E+L +M  R+ + P+V+TY S++ G C       A  +  EM   GV+PD  TF+A+I 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK---G 359
             C   K+D+  +L + ++      D V+ ++L+ G C   RI  A ELF  M  +    
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + DV +Y  LI+  CK   +E A+ +   M   +  P+V+TY++LL GL + G+L  AL
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L  +M     VP+  T+ T I GLC    V  A  +   +    C     +YN L++G 
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME-AKNCVPS 538
           C++GR++ A +LF  +  K  +PD +T + ++   C   ++++A  LL +M+ A    P 
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            VT+  ++ G+ +  +  +    + +M A  +  + ++ SS ++D L K  +    +   
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSS-LIDGLCKAGRVNHAMEVL 423

Query: 599 RHL 601
           +++
Sbjct: 424 KNV 426



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 206/415 (49%), Gaps = 54/415 (13%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSGN+   +A+     M   K  P + +++ LL  L K    D  + LF+R+ S G  P+
Sbjct: 201 KSGNL--EKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN 258

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI+ LC       A +++  +  +C   +TV++N L++G C  GRI EA +LFK
Sbjct: 259 VVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFK 318

Query: 176 KLNVFAC------------------------------------DPNVVTFNTLINGLCRT 199
           ++   +C                                    DP+VVT++ ++ G  R 
Sbjct: 319 EMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRA 378

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN-PN 258
           +  + A +  +EM+    A   P+ VTY+S+IDGLCK G V+ A E+L     +N++ P+
Sbjct: 379 KRFVEAAEFIQEMIARNVA---PNAVTYSSLIDGLCKAGRVNHAMEVL-----KNVDKPD 430

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+TY  +I G C  D  +EA  L  EM++  V+P V TFN++I   C+ G MD+  +LL 
Sbjct: 431 VVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 490

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV-------YSYNILI 371
            M   G+ P  VTY +L++GF   GR+  A ELF  M  K  +           +++ LI
Sbjct: 491 AMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALI 550

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
              CK ++++ A+ +  E+ S    P+      ++ GL + G   +A KLI+ + 
Sbjct: 551 RGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSIS 605


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 175/586 (29%), Positives = 294/586 (50%), Gaps = 42/586 (7%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  +N   K G++    + Y  + M+  + SP + ++  ++  L K +  D  + 
Sbjct: 87  DVVSYSTVINGFFKEGDLDKTYSTY--NEMLDQRISPNVVTYNSIIAALCKAQTVDKAME 144

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  +G+ PD    N +++  C  G    A V L ++      P+ VT+N L++ LC
Sbjct: 145 VLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC 204

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF------------- 209
             GR  EA ++F  +      P + T+ TL+ G   T+  LV +                
Sbjct: 205 KNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNH 263

Query: 210 ------------EEMVNEFGAI--------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                       +E V E   +          P+ VTY ++I  LCK G V+ A     Q
Sbjct: 264 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 323

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  ++P  I YNSLI G C  + W+ A+ L +EM+D G+  + + FN++I+ +CK+G+
Sbjct: 324 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 383

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L +LM++ GV PD +TY++L+DG+CL G++  A +L  SMVS G + D  +Y+ 
Sbjct: 384 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYST 443

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  CK  +++DA+ L+REM S  + P +ITYN +L GLFQ      A +L   +  + 
Sbjct: 444 LINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSG 503

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE--TYNCLINGLCKMGRLKT 487
              +  T+   + GLCKN    +A+++FQ +  C  +L++E  T+N +I+ L K+GR   
Sbjct: 504 RQLELSTYNIILHGLCKNKLTDDALRMFQNL--CLMDLKLEARTFNIMIDALLKVGRNDE 561

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  LF      G +P+  T   M   +  +G +++ + L L ME   C         ++R
Sbjct: 562 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 621

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             +Q  + ++    L  M  EK    + S +S  +DLLS   KY+E
Sbjct: 622 ELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLS-GGKYQE 665



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 258/509 (50%), Gaps = 23/509 (4%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF--TPNTVTFNFLING 160
           +F  L   G+ PD+F  N+L+N LC    +  A  +L  +        P+ V+++ +ING
Sbjct: 39  VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
              EG + +    + ++      PNVVT+N++I  LC+ +    A+++   MV   G + 
Sbjct: 98  FFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVM- 155

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PD +TYNSI+ G C  G   +A   L +M+   + P+V+TYNSL+   C      EA+ 
Sbjct: 156 -PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 214

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +F  M   G++P++ T+  ++      G + +++ LL+LM++ G++P+   ++ L+  + 
Sbjct: 215 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 274

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
              ++  A  +F  M  +G   +  +Y  +I   CK  +VEDA+  + +M+ E + P  I
Sbjct: 275 KQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 334

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            YN+L+ GL        A +LI +M    +  ++  F + ID  CK G V+E+ ++F  +
Sbjct: 335 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 394

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                +  I TY+ LI+G C  G++  A KL   +   G  PD VT ST+I+  CK  +M
Sbjct: 395 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRM 454

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS------- 573
             A  L  +ME+    P  +T+  +L+G  Q  + +         AA++L V        
Sbjct: 455 KDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA---------AAKELYVGITKSGRQ 505

Query: 574 -DLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            +LS  + ++  L K+K   + L  F++L
Sbjct: 506 LELSTYNIILHGLCKNKLTDDALRMFQNL 534


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 163/517 (31%), Positives = 278/517 (53%), Gaps = 16/517 (3%)

Query: 62  SNEAVYFFDCMIKMKP--SPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGLFPDLFV 118
           +N+      C  KM+   +P   ++ +++  L K +       + K + +   + PDL  
Sbjct: 20  ANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVT 79

Query: 119 LNLLINCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
            + +IN  CK G    A  +L  ++ R    P+ VT+  +++GLC +G++  A  + +++
Sbjct: 80  YSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREM 139

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
            +   +P+  TF+ LI G C  R    ALKL++E++    +  KPDVVTY ++IDG CK 
Sbjct: 140 KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILT--SSSWKPDVVTYTALIDGFCKS 197

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G ++KA ++L  M+ R   PNV+TY+SL+ G C   D  +A  LF  M   G  P+VVT+
Sbjct: 198 GNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTY 257

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
             +I+  C   K+D    L++ M      PDTV+YN+L+DG+C +GRI  A++LF  M +
Sbjct: 258 TTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMAT 317

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREM-LSERIRPSVITYNTLLSGLFQVGNLG 416
           K C  D  +Y  L+   C   ++E+A  L   M  +  I P V+TY+ +++G  +     
Sbjct: 318 KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFV 377

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A + I +M   +V P++ T+++ IDGLCK G V  A++V + + N + E  + T+N +I
Sbjct: 378 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVI 437

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME----- 531
             LC++G +  A KL   +   G  P +VT +T++    + G+M+ A +L   M      
Sbjct: 438 GALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKK 497

Query: 532 ---AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
              A N VP E  F  L+RG  +  +  K + ++ ++
Sbjct: 498 SSSAANLVP-EQAFSALIRGLCKAREIDKAMAVVEEL 533



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/425 (32%), Positives = 234/425 (55%), Gaps = 6/425 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P  VT+  +I+G C   ++ +A   F+K+  F   PN  T+N ++NGLC+ R T  A ++
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMREFVA-PNERTYNVVVNGLCKARLTSKAYEV 63

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVITYNSLIC 267
            +EM +  G    PD+VTY+++I+G CK G +D+A E+L +M  R+ I P+V+TY S++ 
Sbjct: 64  LKEMRD--GKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL-ELMIQRGVN 326
           G C       A  +  EM   GV+PD  TF+A+I   C   K+D+  +L  E++      
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD VTY +L+DGFC  G + +A ++   M  + C  +V +Y+ L++  CK   ++ A+ L
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           +R M S+   P+V+TY TL+ GL     +  A  L+D+M      PD+ ++   +DG C+
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI-PDVV 505
            G + EA Q+F+ +    C     TY CL+ G C   RL+ A  L   ++    I PDVV
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 361

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T S ++    +  +  +A + + +M A+N  P+ VT+ +L+ G  +  +    + +L  M
Sbjct: 362 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM 421

Query: 566 AAEKL 570
             +++
Sbjct: 422 VNKRV 426



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/432 (32%), Positives = 231/432 (53%), Gaps = 14/432 (3%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKR-LNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
            P   +F+ L+T     ++ D  + L+K  L S+   PD+     LI+  CK G    A 
Sbjct: 145 EPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAM 204

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +LG +      PN VT++ L++GLC  G + +A  LF+++    C PNVVT+ TLI+GL
Sbjct: 205 KMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGL 264

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C       A  L +EM       C PD V+YN+++DG C+ G +++AK+L  +M  ++  
Sbjct: 265 CAAHKVDAARLLMDEMT---ATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCL 321

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEM-MDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           P+ ITY  L+ GFC     +EA+ L   M    G+ PDVVT++ ++    +  +  +   
Sbjct: 322 PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAE 381

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
            ++ MI R V P+ VTY+SL+DG C  GR+  A E+  +MV+K     V ++N +I A C
Sbjct: 382 FIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALC 441

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN------- 428
           +   +++A  L   M +  + P ++TY TLL G  + G +  A +L + M+         
Sbjct: 442 RLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSA 501

Query: 429 -DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
            ++VP+   F+  I GLCK   + +A+ V + +R+ +CE   E    +++GL + GR + 
Sbjct: 502 ANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEE 560

Query: 488 ACKLFHRLQHKG 499
           A KL + +   G
Sbjct: 561 AGKLINSISKVG 572



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 235/425 (55%), Gaps = 9/425 (2%)

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P VVT+  +I+G C+      AL  FE+M  EF A   P+  TYN +++GLCK     
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVA---PNERTYNVVVNGLCKARLTS 58

Query: 242 KAKELLLQMKD-RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-NGVQPDVVTFNA 299
           KA E+L +M+D +++ P+++TY+++I GFC   +   A  +  EM+  +G+ PDVVT+ +
Sbjct: 59  KAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTS 118

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS-MVSK 358
           +++  C+DGKMD+   ++  M  +GV PD  T+++L+ G+C   ++  A +L+   + S 
Sbjct: 119 VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 178

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
             + DV +Y  LI+  CK   +E A+ +   M   +  P+V+TY++LL GL + G+L  A
Sbjct: 179 SWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 238

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           L L  +M     VP+  T+ T I GLC    V  A  +   +    C     +YN L++G
Sbjct: 239 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDG 298

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME-AKNCVP 537
            C++GR++ A +LF  +  K  +PD +T + ++   C   ++++A  LL +M+ A    P
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 358

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
             VT+  ++ G+ +  +  +    + +M A  +  + ++ SS ++D L K  +    +  
Sbjct: 359 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSS-LIDGLCKAGRVDHAMEV 417

Query: 598 FRHLL 602
            ++++
Sbjct: 418 LKNMV 422



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 2/139 (1%)

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           +C+  + T+  +I+G CK  +LK A   F +++ +   P+  T + +++ LCK     KA
Sbjct: 2   ECQPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKA 60

Query: 524 NDLLLDM-EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
            ++L +M + K+  P  VT+ T++ GF +  +  +   +L +M     +  D+   + VV
Sbjct: 61  YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120

Query: 583 DLLSKDKKYRECLNQFRHL 601
           D L +D K        R +
Sbjct: 121 DGLCRDGKMDRACEMVREM 139


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/472 (35%), Positives = 267/472 (56%), Gaps = 6/472 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+  F  M++ +P P +  FT LL ++AK K++D V++L   L   G+  DL+  NLL
Sbjct: 54  NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +NC C+      A   LG++++  F P+ VTF  LING C   R+ EA  +  ++     
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VV + T+I+ LC+  +   AL LF++M N +G   +PDVV Y S+++GLC  G    
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-YG--IRPDVVMYTSLVNGLCNSGRWRD 230

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL  M  R I P+VIT+N+LI  F     + +A+ L+ EM+   + P++ T+ ++IN
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C +G +D+  ++  LM  +G  PD V Y SL++GFC   ++  A ++F  M  KG   
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  +Y  LI    +  K   A  ++  M+S  + P++ TYN LL  L   G +  AL + 
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410

Query: 423 DKMQ---LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           + MQ   ++ V P+ +T+   + GLC NG + +A+ VF+ +R  + ++ I TY  +I G+
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           CK G++K A  LF  L  KG  P+VVT +TMI  L +EG   +A+ L   M+
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 231/458 (50%), Gaps = 12/458 (2%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ + F  L+N +    +      L   L +     ++ T N L+N  C++    +A   
Sbjct: 70  PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M+ + G   +PD+VT+ S+I+G C    +++A  ++ QM +  I P+V+ Y ++I  
Sbjct: 130 LGKMM-KLGF--EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C       A  LF +M + G++PDVV + +++N  C  G+    + LL  M +R + PD
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +T+N+L+D F   G+   A EL+  M+      ++++Y  LIN  C +  V++A  ++ 
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M ++   P V+ Y +L++G  +   + DA+K+  +M    +  ++ T+ T I G  + G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK---GPIPDVV 505
               A +VF  + +      I TYN L++ LC  G++K A  +F  +Q +   G  P++ 
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T + ++H LC  G+++KA  +  DM  +      +T+  +++G  +  K    V L   +
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
            ++ +  + ++ ++ +  L      +RE L    H+LF
Sbjct: 487 PSKGVKPNVVTYTTMISGL------FREGLKHEAHVLF 518



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 179/366 (48%), Gaps = 3/366 (0%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL LF  MV        P ++ +  +++ + K    D    L   ++   ++ ++ T N 
Sbjct: 56  ALDLFTHMVESRPL---PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+  FC       A     +MM  G +PD+VTF ++IN  C   +M++   ++  M++ G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PD V Y +++D  C  G ++ A  LF  M + G R DV  Y  L+N  C   +  DA 
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L R M   +I+P VIT+N L+    + G   DA +L ++M    + P+ FT+ + I+G 
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G V EA Q+F  +    C   +  Y  LING CK  ++  A K+F+ +  KG   + 
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +T +T+I    + G+ + A ++   M ++   P+  T+  LL     N K  K +++   
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412

Query: 565 MAAEKL 570
           M   ++
Sbjct: 413 MQKREM 418



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 157/306 (51%)

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
            + EA  LF  M+++   P ++ F  ++N   K  K D V  L + +   GV+ D  T N
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            LM+ FC   +   A      M+  G   D+ ++  LIN  C   ++E+A+ +  +M+  
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            I+P V+ Y T++  L + G++  AL L D+M+   + PD   + + ++GLC +G   +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             + + +   K +  + T+N LI+   K G+   A +L++ +      P++ T +++I+ 
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
            C EG +D+A  +   ME K C P  V + +L+ GF +  K    + + ++M+ + L  +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351

Query: 574 DLSLSS 579
            ++ ++
Sbjct: 352 TITYTT 357



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 129/271 (47%), Gaps = 2/271 (0%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G     E +Y  + MI+M  +P + ++T L+         D    +F  + + G FPD
Sbjct: 259 KEGKFLDAEELY--NEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LIN  CK      A  +   + +   T NT+T+  LI G    G+   A  +F 
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      PN+ T+N L++ LC       AL +FE+M         P++ TYN ++ GLC
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            +G ++KA  +   M+ R ++  +ITY  +I G C     K A  LF  +   GV+P+VV
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
           T+  MI+   ++G   + + L   M + GV+
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 165/521 (31%), Positives = 271/521 (52%), Gaps = 4/521 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  MI     P   ++  L+       ++  VV + + ++++GL PD     LL++ LCK
Sbjct: 219 FQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCK 278

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A +    + R    P+   +  L++G   +G + E       +      PN   
Sbjct: 279 NGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRI 338

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FN +     +      A+ +F +M  +      PDVV++ ++ID LCK G VD A     
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQG---LSPDVVSFGALIDALCKLGRVDDAVLQFN 395

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           QM +  + PN+  ++SL+ G C V  W++A+ LF E++D G+  D V FN ++   C +G
Sbjct: 396 QMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEG 455

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ +  RL++LMI+ GV P+ ++YN+L+ G CL GRI  A +L   MVS G + + ++Y 
Sbjct: 456 RVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYT 515

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           IL+   CK ++V+DA  L+REML + + P V TYNT+L GLFQ G   +A +L   M  +
Sbjct: 516 ILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINS 575

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
               D +T+   ++GLCKN FV EA ++F+ + +   +L   T+N +I  L K GR + A
Sbjct: 576 RTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDA 635

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             LF  +   G +PDVVT   +   L +EG + + + L   ME     P+      L+R 
Sbjct: 636 MDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRR 695

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
            +     S+  V L+K+  EK    + S +S ++ L S+ +
Sbjct: 696 LLHRGDISRAGVYLYKL-DEKNFSLEASTTSMLISLYSRGE 735



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 158/527 (29%), Positives = 278/527 (52%), Gaps = 10/527 (1%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK---NKQYDTVVS 102
            + + +  R +SG++  +EA+  FD ++       + +F  LLT++++   +   + VVS
Sbjct: 14  ELERVIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVS 73

Query: 103 LFKRLN---SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
           LF R+    S+ + P+    ++LI C C+MG     F   G IL++ +  N +  + L+ 
Sbjct: 74  LFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLK 133

Query: 160 GLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
           GLC   R+ EA   L  +++ F C P+VV +NT+ING  R      A  LF EM+++   
Sbjct: 134 GLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQG-- 191

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
              P+VVTY ++IDGLCK   VD+AK +  QM DR + P+  TYN LI G+     WKE 
Sbjct: 192 -IPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEV 250

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             +  EM  +G++PD +T+  +++Y CK+G+  +     + M ++G+ PD   Y  L+ G
Sbjct: 251 VQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHG 310

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +   G +S        MV  G   +   +NI+  A  K   +E+A+ ++ +M  + + P 
Sbjct: 311 YATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPD 370

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           V+++  L+  L ++G + DA+   ++M    V P+ F F++ + GLC  G   +A ++F 
Sbjct: 371 VVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF 430

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            + +    +    +N L+  LC  GR+  A +L   +   G  P+V++ +T++   C  G
Sbjct: 431 EVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTG 490

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           ++D+A  LL  M +    P+E T+  LLRG+ +  +      L  +M
Sbjct: 491 RIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREM 537



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 239/493 (48%), Gaps = 6/493 (1%)

Query: 35  DLSSHHFK-DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK 93
           ++S+H  + D  + A  L+   K+G     EA  FFD M +    P +  + ILL   A 
Sbjct: 256 EMSTHGLEPDCITYALLLDYLCKNGR--CREARLFFDSMFRKGIKPDVAIYAILLHGYAT 313

Query: 94  NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVT 153
                 + S    +  NG+ P+  + N++     K  +   A  +  ++ +   +P+ V+
Sbjct: 314 KGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVS 373

Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
           F  LI+ LC  GR+ +A   F ++      PN+  F++L+ GLC       A +LF E++
Sbjct: 374 FGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVL 433

Query: 214 NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
           ++   IC  D V +N+++  LC +G V +A+ L+  M    + PNVI+YN+L+ G C   
Sbjct: 434 DQ--GIC-VDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTG 490

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
              EA  L   M+ NG++P+  T+  ++   CK  ++D    L   M+ +GV P   TYN
Sbjct: 491 RIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYN 550

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +++ G    GR S A EL+++M++   + D+Y+YNI++N  CK+  V++A  ++R + S+
Sbjct: 551 TILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK 610

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             +   +T+N ++  L + G   DA+ L   +    +VPD  T+    + L + G + E 
Sbjct: 611 DPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEF 670

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             +F A+            N L+  L   G +  A    ++L  K    +  T S +I  
Sbjct: 671 DGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISL 730

Query: 514 LCKEGQMDKANDL 526
             +      A  L
Sbjct: 731 YSRGEYQPHAKSL 743



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 237/497 (47%), Gaps = 7/497 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E V   + M      P   ++ +LL  L KN +       F  +   G+ PD+ +  +L+
Sbjct: 249 EVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILL 308

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +     G  S     L  ++ +  +PN   FN +      +  I EA  +F K+      
Sbjct: 309 HGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLS 368

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VV+F  LI+ LC+      A+  F +M+NE      P++  ++S++ GLC  G  +KA
Sbjct: 369 PDVVSFGALIDALCKLGRVDDAVLQFNQMINEG---VTPNIFVFSSLVYGLCTVGKWEKA 425

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +EL  ++ D+ I  + + +N+L+C  C      EA+ L   M+  GV+P+V+++N ++  
Sbjct: 426 EELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAG 485

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           +C  G++D+  +LL++M+  G+ P+  TY  L+ G+C   R+  A  LF  M+ KG    
Sbjct: 486 HCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPV 545

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN +++   +  +  +A  LY  M++ R +  + TYN +L+GL +   + +A K+  
Sbjct: 546 VATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFR 605

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           ++   D   DS TF   I  L K G   +A+ +F  I        + TY  +   L + G
Sbjct: 606 RLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEG 665

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            L     LF  ++  G  P+    + ++  L   G + +A   L  ++ KN      T  
Sbjct: 666 SLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTS 725

Query: 544 TLL----RGFVQNNKKS 556
            L+    RG  Q + KS
Sbjct: 726 MLISLYSRGEYQPHAKS 742



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 190/412 (46%), Gaps = 49/412 (11%)

Query: 205 ALKLFEEMVNEFGAICKP-DVVTYNSIIDGLCKDGFVDKAKELLLQMKDR-------NIN 256
           ALKLF+E+++      +P  V  +N ++  + + G    A E ++ +  R        + 
Sbjct: 33  ALKLFDELLH----CARPASVRAFNQLLTVVSRAG-CSSASERVVSLFTRMARECSSKVA 87

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN  TY+ LI  FC +   +     F  ++  G + +V+  + ++   C   ++D+   +
Sbjct: 88  PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147

Query: 317 LEL-MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L L M + G  PD V YN++++GF   G++ +A  LF+ M+ +G   +V +Y  +I+  C
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K Q V+ A  ++++M+   ++P   TYN L+ G    G   + ++++++M  + + PD  
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL---------- 485
           T+A  +D LCKNG   EA   F ++     +  +  Y  L++G    G L          
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327

Query: 486 -------------------------KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                                    + A  +F++++ +G  PDVV+   +I  LCK G++
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRV 387

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
           D A      M  +   P+   F +L+ G     K  K   L  ++  + + V
Sbjct: 388 DDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICV 439


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 153/461 (33%), Positives = 253/461 (54%), Gaps = 5/461 (1%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           S F+   S+   P       LI    + G +     +   +L   F+P+ +T N ++   
Sbjct: 10  SFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAY 69

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  G +  A   F+      C P   T+  LI+GLC+ +    A +L +EM+ +    C 
Sbjct: 70  CQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD---CH 124

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD   YN +I GLCK G +D A+ +L  M +R+  P+VITY SLI G C  +   EA+ L
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL 184

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             +M ++G+ PD V +NA++N  CK  ++++V++LLE M++ G  PDT +YN+++   C 
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G+   A ++   M+ K C  DV +YN L++  CK  K+++A  L  +M+  R  P+VIT
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y TL+ G  +   L DA ++++ M    + PD  T+   +DGLCK G + EA ++ + + 
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMV 364

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
              C   + TY+ L+NGLCK+G++  A  L   +  +G  P++VT +TMI   CK G++D
Sbjct: 365 EKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVD 424

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           + + +L  M+  +C P  VT+ TL+ G+ + N+      +L
Sbjct: 425 EGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL 465



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 163/532 (30%), Positives = 271/532 (50%), Gaps = 32/532 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    D MI+    P    +  L+  L K  + D   ++ K +      PD+     L
Sbjct: 109 DEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSL 168

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+      A  ++ ++  S  TP+TV +N L+NGLC + ++ E ++L +++     
Sbjct: 169 IVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGR 228

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+  ++NT++  LC +     A K+ E+M+ +    C PDVVTYNS++DG CK   +D+
Sbjct: 229 EPDTFSYNTVVACLCESGKYEEAGKILEKMIEK---KCGPDVVTYNSLMDGFCKVSKMDE 285

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ LL  M  R   P VITY +LI GF   D   +A  +  +M   G+ PD+VT+N +++
Sbjct: 286 AERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLD 345

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK GK+++ + LLE+M+++   PD VTY+ L++G C +G++  AR L   M+ +GC+ 
Sbjct: 346 GLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQP 405

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL----------------- 405
           ++ ++N +I+  CK  KV++   +   M      P V+TY+TL                 
Sbjct: 406 NLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL 465

Query: 406 ------------LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
                       L GL   G + +A +++D M      P S  +A  I GLC      EA
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEA 525

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           +++ Q +    CE  + TY+ LINGLCK  R++ A  +   +  KG +PDV T +++I  
Sbjct: 526 LKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDG 585

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            CK  +MD A      M    C P ++ +  L+ GF Q+    K + ++  M
Sbjct: 586 FCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLM 637



 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 167/513 (32%), Positives = 261/513 (50%), Gaps = 38/513 (7%)

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
           KM  SP   ++ IL+  L + ++ D    L   +      PD  V N LI  LCKMG   
Sbjct: 85  KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKID 144

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            A  VL  +L     P+ +T+  LI G C    + EA +L +K+      P+ V +N L+
Sbjct: 145 AARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALL 204

Query: 194 NGLCRTRNTLVALKLFEEMV------------------------NEFGAI--------CK 221
           NGLC+        KL EEMV                         E G I        C 
Sbjct: 205 NGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCG 264

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PDVVTYNS++DG CK   +D+A+ LL  M  R   P VITY +LI GF   D   +A  +
Sbjct: 265 PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRV 324

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             +M   G+ PD+VT+N +++  CK GK+++ + LLE+M+++   PD VTY+ L++G C 
Sbjct: 325 MEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCK 384

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           +G++  AR L   M+ +GC+ ++ ++N +I+  CK  KV++   +   M      P V+T
Sbjct: 385 LGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVT 444

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+TL+ G  +   + DA  ++       + PD  ++++ ++GLC  G V EA +V   + 
Sbjct: 445 YSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMT 498

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
              C      Y  +I GLC + R   A K+   +  +G  P++ T S +I+ LCK  +++
Sbjct: 499 KQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVE 558

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            A ++L  M  K CVP   T+ +L+ GF + NK
Sbjct: 559 DAINVLDVMLEKGCVPDVATYTSLIDGFCKINK 591



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 159/482 (32%), Positives = 257/482 (53%), Gaps = 12/482 (2%)

Query: 72  MIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           M KMK S   P   ++  LL  L K  Q + V  L + +   G  PD F  N ++ CLC+
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A  +L +++     P+ VT+N L++G C   ++ EA RL + +    C P V+T
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           + TLI G  R      A ++ E+M   F A   PD+VTYN ++DGLCK G +++A ELL 
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDM---FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLE 361

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M +++  P+V+TY+ L+ G C +    +A+ L   M++ G QP++VTFN MI+  CK G
Sbjct: 362 VMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAG 421

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           K+D+ +++LELM +    PD VTY++L+DG+C   R+  A  +       G   D  SY+
Sbjct: 422 KVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYS 475

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            ++   C   KVE+A  +   M  +   P+   Y  ++ GL  V    +ALK++  M   
Sbjct: 476 SMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSER 535

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
              P+ +T++  I+GLCK   V +A+ V   +    C   + TY  LI+G CK+ ++  A
Sbjct: 536 GCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAA 595

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            + F  ++  G  PD +  + +I   C+ G ++KA +++  M  K C P   T+ +L+R 
Sbjct: 596 YQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRS 655

Query: 549 FV 550
             
Sbjct: 656 LT 657



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 256/506 (50%), Gaps = 13/506 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E   FF         P  +++  L+T  ++      V+ +   + +    PD+   N ++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 124 NCLCKMGITSGAFVVL-GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
              C++G    A     G++  S   P   T+  LI+GLC   RI EA +L  ++    C
Sbjct: 67  KAYCQIGDLDRALSHFRGKMWCS---PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+   +N LI GLC+      A  + + M+      C PDV+TY S+I G C+   +D+
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS---CVPDVITYTSLIVGCCQTNALDE 180

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++L+ +MK+  + P+ + YN+L+ G C  +  +E   L  EM++ G +PD  ++N ++ 
Sbjct: 181 ARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVA 240

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ GK ++  ++LE MI++   PD VTYNSLMDGFC V ++  A  L   MV + C  
Sbjct: 241 CLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP 300

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V +Y  LI    +  ++ DA  +  +M    I P ++TYN LL GL + G L +A +L+
Sbjct: 301 TVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELL 360

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M   D  PD  T++  ++GLCK G V +A  + + +    C+  + T+N +I+G CK 
Sbjct: 361 EVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKA 420

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G++    K+   ++     PDVVT ST+I   CK  +M  A  +L         P + ++
Sbjct: 421 GKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASY 474

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAE 568
            ++L G     K  +   ++  M  +
Sbjct: 475 SSMLEGLCSTGKVEEAQEVMDLMTKQ 500



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 202/401 (50%), Gaps = 7/401 (1%)

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           R +E    F++       P+  T+  LI G  R  N+ + L++  EM+    +   PDV+
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFS---PDVI 60

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           T+N+I+   C+ G +D+A   L   + +   +P   TY  LI G C      EA  L  E
Sbjct: 61  THNTILKAYCQIGDLDRA---LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDE 117

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+     PD   +N +I   CK GK+D    +L++M++R   PD +TY SL+ G C    
Sbjct: 118 MIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA 177

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  AR+L   M   G   D  +YN L+N  CK  ++E+   L  EM+     P   +YNT
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           +++ L + G   +A K+++KM      PD  T+ + +DG CK   + EA ++ + +   +
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           C   + TY  LI G  +  RL  A ++   +   G  PD+VT + ++  LCK G++++A+
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +LL  M  K+C P  VT+  L+ G  +  K     +LL  M
Sbjct: 358 ELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMM 398



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 183/346 (52%), Gaps = 9/346 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A    + M K   SP + ++  LL  L K  + +    L + +      PD+   ++L+
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N LCK+G    A ++L  +L     PN VTFN +I+G C  G++ E  ++ + +   +C 
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VVT++TLI+G C+      A  +             PD  +Y+S+++GLC  G V++A
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDAFAILG---------ISPDKASYSSMLEGLCSTGKVEEA 490

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +E++  M  +   P    Y  +I G C V+   EA  +   M + G +P++ T++ +IN 
Sbjct: 491 QEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILING 550

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK  +++    +L++M+++G  PD  TY SL+DGFC + ++  A + F +M   GC  D
Sbjct: 551 LCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPD 610

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
             +YNILI+  C+   VE A+ + + ML +   P   TY +L+  L
Sbjct: 611 KLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 145/293 (49%), Gaps = 2/293 (0%)

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           E    F E   +  +P   T+ A+I    + G    V  +   M+ R  +PD +T+N+++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
             +C +G + RA   F   +   C    ++Y ILI+  C+ Q++++A  L  EM+ +   
Sbjct: 67  KAYCQIGDLDRALSHFRGKM--WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH 124

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P    YN L++GL ++G +  A  ++  M     VPD  T+ + I G C+   + EA ++
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL 184

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
            + ++          YN L+NGLCK  +L+   KL   +   G  PD  + +T++  LC+
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
            G+ ++A  +L  M  K C P  VT+ +L+ GF + +K  +   LL  M   +
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 45/102 (44%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+   D M++    P + ++T L+    K  + D     FK +  +G  PD    N+L
Sbjct: 558 EDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNIL 617

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
           I+  C+ G    A  V+  +L     P+  T+  L+  L  E
Sbjct: 618 ISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 161/458 (35%), Positives = 250/458 (54%), Gaps = 7/458 (1%)

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
           GA     R+LR    P+TV FN L+  +           L  +++ F   PN+ T + LI
Sbjct: 44  GAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILI 103

Query: 194 NGLCRTRNTLV--ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           N  C      +  AL LF++M+ E     +PDVVTY ++I+GLCK G    A  LL  M 
Sbjct: 104 NSFCHLNRGKIGEALHLFDKMIGEG---FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMV 160

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            +N  PNV  YN++I   C      EA  LF EM+  G+ PD+ T+N++I+  C   +  
Sbjct: 161 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 220

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-CRHDVYSYNIL 370
            V  LL  M+   + PD V++N+++D  C  G+++ A ++   M+ +G C  +V SYN L
Sbjct: 221 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTL 280

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           IN  CK Q+++ A+ L+ EM  + + P  +TY+TL+ GL  V  L DA+ L  +M     
Sbjct: 281 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 340

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +P+  T+   +D LCKN ++ EA+ + +AI     +  I+  N  I+G+C+ G L+ A  
Sbjct: 341 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 400

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           LF  L  KG  PDV T S MI+ LC+ G +D+A+ L  +M+   C  +   + T+ RGF+
Sbjct: 401 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 460

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +NN+ S+ + LL +M A     +D S  +  V +LS D
Sbjct: 461 RNNETSRAIQLLQEMVARGF-SADASTMTLFVKMLSDD 497



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 246/507 (48%), Gaps = 76/507 (14%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T + A+  F+ M++M+P P    F  LLT +AK K + T++SL  +++S G+ P+++ L+
Sbjct: 41  TIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLH 100

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA--EGRIMEAARLFKKLN 178
           +                                   LIN  C    G+I EA  LF K+ 
Sbjct: 101 I-----------------------------------LINSFCHLNRGKIGEALHLFDKMI 125

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                P+VVT+ TLINGLC+  NT  A++L   MV +    C+P+V  YN+IID LCKD 
Sbjct: 126 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN---CQPNVFAYNTIIDSLCKDR 182

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V +A  L  +M  + I+P++ TYNSLI   C + +WK    L  EM+D+ + PDVV+FN
Sbjct: 183 QVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFN 242

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRG---------------------------------- 324
            +++  CK+GK+ + + +++ MIQRG                                  
Sbjct: 243 TVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 302

Query: 325 --VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
             + PDTVTY++L+ G C V R+  A  LF  MV+     ++ +Y IL++  CK++ + +
Sbjct: 303 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE 362

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A+ L + +    + P +   N  + G+ + G L  A  L   +    + PD +T++  I+
Sbjct: 363 AMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMIN 422

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLC+ G + EA ++F+ +    C L    YN +  G  +      A +L   +  +G   
Sbjct: 423 GLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSA 482

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLD 529
           D  T +  +  L  +G       +L D
Sbjct: 483 DASTMTLFVKMLSDDGLDQSLKQILRD 509



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 3/216 (1%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           ++ A+  +  ML  +  PS + +N LL+ + ++ +    L L  +M    + P+ +T   
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 440 YIDGLCK--NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            I+  C    G + EA+ +F  +        + TY  LINGLCK+G    A +L   +  
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           K   P+V   +T+I  LCK+ Q+ +A +L  +M  K   P   T+ +L+       +   
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           V  LL++M   K++   +S ++ VVD L K+ K  E
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNT-VVDALCKEGKVTE 256


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 157/474 (33%), Positives = 258/474 (54%), Gaps = 38/474 (8%)

Query: 54  RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
           R    +I  ++A+  F  M + +P P +  F+ LL+ +AK  ++D V+S  +++   G+ 
Sbjct: 51  RTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGIS 110

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
            +L+  N+LINC C+    S A  +LG++++  + P+ VT N L+NG C   RI +A  L
Sbjct: 111 HNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVAL 170

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             ++      P+ VTF TLI+GL        A+ L + MV      C+PD+VTY ++++G
Sbjct: 171 VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG---CQPDLVTYGAVVNG 227

Query: 234 LCKDGFVDKAKELL-----------------------------------LQMKDRNINPN 258
           LCK G  D A  LL                                    +M+++ + PN
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           VITY+SLI   C    W +A  L  +M++  + P++VTF+A+I+   K GK+ K  +L E
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MI+R ++P+  TY+SL++GFC++ R+  A+++   M+ K C  +V +YN LIN  CK +
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +V+  + L+REM    +  + +TY TL+ G FQ  +  +A  +  +M    V P+  T+ 
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 467

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
             +DGLCKNG + +A+ VF+ ++    E  I TYN +I G+CK G+ K     F
Sbjct: 468 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 202/368 (54%), Gaps = 3/368 (0%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+++ F+ L++ + +     + +   E+M  E   I   ++ TYN +I+  C+   +  A
Sbjct: 76  PSIIEFSKLLSAIAKMNKFDLVISFGEKM--EILGISH-NLYTYNILINCFCRCSRLSLA 132

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL +M      P+++T NSL+ GFC  +   +A  L  +M++ G +PD VTF  +I+ 
Sbjct: 133 LALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG 192

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
                K  +   L++ M+QRG  PD VTY ++++G C  G    A  L   M +     +
Sbjct: 193 LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V  Y+ +I++ CK +  +DA+ L+ EM ++ +RP+VITY++L+S L   G   DA +L+ 
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M    + P+  TF+  ID   K G +++A ++++ +     +  I TY+ LING C + 
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           RL  A ++   +  K  +P+VVT +T+I+  CK  ++DK  +L  +M  +  V + VT+ 
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYT 432

Query: 544 TLLRGFVQ 551
           TL+ GF Q
Sbjct: 433 TLIHGFFQ 440



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 163/294 (55%), Gaps = 3/294 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+   + M   K    +  ++ ++  L K +  D  ++LF  + + G+ P++   + LI+
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
           CLC  G  S A  +L  ++     PN VTF+ LI+    +G++++A +L++++   + DP
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N+ T+++LING C       A ++ E M+ +    C P+VVTYN++I+G CK   VDK  
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRK---DCLPNVVTYNTLINGFCKAKRVDKGM 413

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           EL  +M  R +  N +TY +LI GF    D   A+ +F +M+  GV P+++T+N +++  
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           CK+GK+ K   + E + +  + PD  TYN +++G C  G+       FV+   K
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVASALK 527



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 146/292 (50%)

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           +  +A  LF  M  +   P ++ F+ +++   K  K D V    E M   G++ +  TYN
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            L++ FC   R+S A  L   M+  G   D+ + N L+N  C   ++ DAV L  +M+  
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             +P  +T+ TL+ GLF      +A+ LID+M      PD  T+   ++GLCK G    A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           + +   +   K E  +  Y+ +I+ LCK      A  LF  +++KG  P+V+T S++I  
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           LC  G+   A+ LL DM  +   P+ VTF  L+  FV+  K  K   L  +M
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 1/237 (0%)

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           Y Y  ++     D +++DA+ L+  M   R  PS+I ++ LLS + ++      +   +K
Sbjct: 44  YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M++  +  + +T+   I+  C+   +  A+ +   +     E  I T N L+NG C   R
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +  A  L  ++   G  PD VT +T+IH L    +  +A  L+  M  + C P  VT+  
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           ++ G  +       + LL+KM A K + +++ + S V+D L K +   + LN F  +
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 159/489 (32%), Positives = 263/489 (53%), Gaps = 38/489 (7%)

Query: 54  RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
           R+   N+  N+A+  F  M+  +P P +  FT LL+++AK  +YD V+SLF+++   G+ 
Sbjct: 56  RNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIP 115

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P L   N++++C+C       A   LG++++  F                          
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGF-------------------------- 149

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
                    +P++VTF +L+NG C       A+ LF++++   G   KP+VVTY ++I  
Sbjct: 150 ---------EPDLVTFTSLLNGYCHWNRIEDAIALFDQIL---GMGFKPNVVTYTTLIRC 197

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK+  ++ A EL  QM      PNV+TYN+L+ G C +  W +A  L  +MM   ++P+
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           V+TF A+I+   K GK+ +   L  +MIQ  V PD  TY SL++G C+ G +  AR++F 
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M   GC  +   Y  LI+  CK ++VED + ++ EM  + +  + ITY  L+ G   VG
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
               A ++ ++M      PD  T+   +DGLC NG V +A+ +F+ +R  + ++ I TY 
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +I G+CK+G+++ A  LF  L  KG  P+V+T +TMI   C+ G + +A+ L   M+  
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497

Query: 534 NCVPSEVTF 542
             +P+E  +
Sbjct: 498 GFLPNESVY 506



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 224/440 (50%), Gaps = 3/440 (0%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  +  R++ S   P+ + F  L++ +    R      LF+++ +    P + T N +++
Sbjct: 67  ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
            +C +     A     +M+ + G   +PD+VT+ S+++G C    ++ A  L  Q+    
Sbjct: 127 CVCLSSQPCRASCFLGKMM-KLGF--EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PNV+TY +LI   C       A  LF +M  NG +P+VVT+NA++   C+ G+     
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            LL  M++R + P+ +T+ +L+D F  VG++  A+EL+  M+      DV++Y  LIN  
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C    +++A  ++  M      P+ + Y TL+ G  +   + D +K+  +M    VV ++
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   I G C  G    A +VF  + + +    I TYN L++GLC  G+++ A  +F  
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           ++ +    ++VT + +I  +CK G+++ A DL   + +K   P+ +T+ T++ GF +   
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483

Query: 555 KSKVVVLLHKMAAEKLVVSD 574
             +   L  KM  +  + ++
Sbjct: 484 IHEADSLFKKMKEDGFLPNE 503



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 165/326 (50%), Gaps = 2/326 (0%)

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
            + +A  LF  M+ +   P ++ F  +++   K  + D V  L E M   G+ P   T N
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            +M   CL  +  RA      M+  G   D+ ++  L+N  C   ++EDA+ L+ ++L  
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             +P+V+TY TL+  L +  +L  A++L ++M  N   P+  T+   + GLC+ G   +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             + + +   + E  + T+  LI+   K+G+L  A +L++ +      PDV T  ++I+ 
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           LC  G +D+A  +   ME   C P+EV + TL+ GF ++ +    + + ++M+ + +V +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362

Query: 574 DLSLSSKVVD--LLSKDKKYRECLNQ 597
            ++ +  +    L+ +    +E  NQ
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQ 388


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 174/518 (33%), Positives = 272/518 (52%), Gaps = 41/518 (7%)

Query: 54  RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
           R+   ++  NEA+  F  M++ +P P +  FT LL ++AK K++D V++L K L   G+ 
Sbjct: 44  RNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVS 103

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
            DL+  NLL+NC C+               + C                       A+  
Sbjct: 104 NDLYTCNLLMNCFCQSS-------------QPCL----------------------ASSF 128

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             KL     +P++ TF +LING C       A+ +  +MV E G   KPDVV Y +IID 
Sbjct: 129 LGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV-EMGI--KPDVVIYTTIIDS 185

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK+G VD A  L  QM++  I P+V+ Y SL+ G C    W++A  L   MM   ++PD
Sbjct: 186 LCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPD 245

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           V+TFNA+I+   K+GK+     L   MIQ  + P+  TY SL++G C+ GR+  AR++F 
Sbjct: 246 VITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFY 305

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M +KGC  DV +Y  LIN  CK +KVEDA+ ++ EM  + +  + ITY TL+ G   VG
Sbjct: 306 LMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVG 365

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE---LRIE 470
               A ++   M    V P+  T+   +  LC NG V +A+ +F+ ++  + +     I 
Sbjct: 366 KPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIR 425

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYN L++GLC  G+L+ A  +F  +Q +     ++T + +I  +CK G++  A +L   +
Sbjct: 426 TYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSL 485

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +K   P+ VT+ T++ G  +     +  VL  KM  +
Sbjct: 486 PSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKED 523



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 209/370 (56%), Gaps = 6/370 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+   + M++M   P +  +T ++  L KN   D  +SLF ++ + G+ PD+ +   L+
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N LC  G    A ++L  +++    P+ +TFN LI+    EG++++A  L+ ++   +  
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA 278

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+ T+ +LINGLC       A ++F  M  +    C PDVV Y S+I+G CK   V+ A
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKG---CFPDVVAYTSLINGFCKCKKVEDA 335

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ++  +M  + +  N ITY +LI GF  V     A+ +F  M+  GV P++ T+N +++ 
Sbjct: 336 MKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHC 395

Query: 304 NCKDGKMDKVNRLLELMIQR---GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
            C +GK++K   + E M +R   GV P+  TYN L+ G C  G++ +A  +F  M  +  
Sbjct: 396 LCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDM 455

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
              + +Y I+I   CK  KV+DA+ L+  + S+ ++P+V+TY T++SGLF+ G + +A  
Sbjct: 456 DIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHV 515

Query: 421 LIDKMQLNDV 430
           L  KM+ + V
Sbjct: 516 LFRKMKEDGV 525



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 181/366 (49%), Gaps = 3/366 (0%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL LF  MV        P ++ +  +++ + K    D    L   ++   ++ ++ T N 
Sbjct: 55  ALDLFSHMVESRPL---PSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNL 111

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+  FC       A     ++M  G +PD+ TF ++IN  C   ++++   ++  M++ G
Sbjct: 112 LMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMG 171

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PD V Y +++D  C  G +  A  LF  M + G R DV  Y  L+N  C   +  DA 
Sbjct: 172 IKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 231

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L R M+  +I+P VIT+N L+    + G L DA +L ++M    + P+ FT+ + I+GL
Sbjct: 232 LLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGL 291

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G + EA Q+F  +    C   +  Y  LING CK  +++ A K+F+ +  KG   + 
Sbjct: 292 CMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNT 351

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +T +T+I      G+ + A ++   M ++   P+  T+  LL     N K +K +++   
Sbjct: 352 ITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFED 411

Query: 565 MAAEKL 570
           M   ++
Sbjct: 412 MQKREI 417



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 163/308 (52%)

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
            + EA  LF  M+++   P ++ F  ++N   K  K D V  L + +   GV+ D  T N
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            LM+ FC   +   A      ++  G   D++++  LIN  C   ++E+A+ +  +M+  
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            I+P V+ Y T++  L + G++ +AL L ++M+   + PD   + + ++GLC +G   +A
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             + + +   K +  + T+N LI+   K G+L  A +L++ +      P++ T +++I+ 
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           LC EG++D+A  +   ME K C P  V + +L+ GF +  K    + + ++M+ + L  +
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350

Query: 574 DLSLSSKV 581
            ++ ++ +
Sbjct: 351 TITYTTLI 358



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 132/263 (50%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   ++ MI+M  +P + ++T L+  L    + D    +F  + + G FPD+     LI
Sbjct: 264 DAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLI 323

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  CK      A  +   + +   T NT+T+  LI G    G+   A  +F  +      
Sbjct: 324 NGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVP 383

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+ T+N L++ LC       AL +FE+M         P++ TYN ++ GLC +G ++KA
Sbjct: 384 PNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKA 443

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +   M+ R+++  +ITY  +I G C     K+A  LF  +   GV+P+VVT+  MI+ 
Sbjct: 444 LMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISG 503

Query: 304 NCKDGKMDKVNRLLELMIQRGVN 326
             ++G M + + L   M + GV+
Sbjct: 504 LFREGLMLEAHVLFRKMKEDGVS 526


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 165/504 (32%), Positives = 266/504 (52%), Gaps = 40/504 (7%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
            S   + +G+   + L +  +   +  +  ++F   M++ +P P +  F+ LL+ ++K K
Sbjct: 38  FSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFH--MVQCRPLPSIADFSRLLSAISKMK 95

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           +YD V+ L++++   G+  +L   N+L+NC C+    S A   LG               
Sbjct: 96  KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLG--------------- 140

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
                               K+     +P++VTF +L+NG CR      AL +F++MV  
Sbjct: 141 --------------------KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV-- 178

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            G   KP+VV YN+IIDGLCK   VD A +LL +M+   I P+V+TYNSLI G C    W
Sbjct: 179 -GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            +A  +   M    + PDV TFNA+I+   K+G++ +     E MI+R ++PD VTY+ L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           + G C+  R+  A E+F  MVSKGC  DV +Y+ILIN  CK +KVE  + L+ EM    +
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
             + +TY  L+ G  + G L  A ++  +M    V P+  T+   + GLC NG + +A+ 
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +   ++    +  I TYN +I G+CK G +  A  ++  L  +G +PD+ T +TM+  L 
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477

Query: 516 KEGQMDKANDLLLDMEAKNCVPSE 539
           K+G   +A+ L   M+    +P+E
Sbjct: 478 KKGLRREADALFRKMKEDGILPNE 501



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 217/423 (51%), Gaps = 3/423 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+   F+ L++ +    +      L++++ +     N+ T N L+N  CR     +AL  
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M+ + G   +P +VT+ S+++G C+   V  A  +  QM      PNV+ YN++I G
Sbjct: 139 LGKMI-KLGH--EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDG 195

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C       A  L   M  +G+ PDVVT+N++I+  C  G+     R++  M +R + PD
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
             T+N+L+D     GR+S A E +  M+ +    D+ +Y++LI   C   ++++A  ++ 
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+S+   P V+TY+ L++G  +   +   +KL  +M    VV ++ T+   I G C+ G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            +  A ++F+ +  C     I TYN L++GLC  G+++ A  +   +Q  G   D+VT +
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +I  +CK G++  A D+   +  +  +P   T+ T++ G  +   + +   L  KM  +
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495

Query: 569 KLV 571
            ++
Sbjct: 496 GIL 498



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 167/327 (51%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D + +L   M      P++  ++ L+     +  +     L+ +M   G+  ++ T N 
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           ++N  C+  ++      L  MI+ G  P  VT+ SL++GFC   R+  A  +F  MV  G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + +V  YN +I+  CK ++V++A+ L   M  + I P V+TYN+L+SGL   G   DA 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +++  M   ++ PD FTF   ID   K G V EA + ++ +     +  I TY+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C   RL  A ++F  +  KG  PDVVT S +I+  CK  +++    L  +M  +  V + 
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMA 566
           VT+  L++G+ +  K +    +  +M 
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMV 388



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 160/326 (49%), Gaps = 20/326 (6%)

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQ--------------------PDVVTFNAMINYNC 305
           ICGFC           + EM+ NG++                    P +  F+ +++   
Sbjct: 33  ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           K  K D V  L E M   G+  +  T N L++ FC   ++S A      M+  G    + 
Sbjct: 93  KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           ++  L+N  C+  +V DA+ ++ +M+    +P+V+ YNT++ GL +   + +AL L+++M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           + + + PD  T+ + I GLC +G   +A ++   +   +    + T+N LI+   K GR+
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A + +  +  +   PD+VT S +I+ LC   ++D+A ++   M +K C P  VT+  L
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLV 571
           + G+ ++ K    + L  +M+   +V
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVV 358


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 167/514 (32%), Positives = 268/514 (52%), Gaps = 11/514 (2%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK-------NKQYD 98
            + + +  R +SG++  ++A+  FD ++       + +F  LLT +++         + +
Sbjct: 14  ELERVIGSRARSGSLGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESE 73

Query: 99  TVVSLFKRLNSN---GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
            VVSLF R+       + PD    ++LI C C+MG     F   G IL+S +  N +  N
Sbjct: 74  LVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVIN 133

Query: 156 FLINGLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
            L+ GLC   R+ EA   L K++    C P+VV++NTL+ G C  +    AL+L   M +
Sbjct: 134 QLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMAD 193

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
             G  C P+VV+Y  +I+G   +G VDKA  L L+M DR I PNV+TY ++I G C    
Sbjct: 194 SQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
              A+ +F +M+D GV+PD  T+N +I+     GK  +V R+LE M   G+ PD  TY S
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++  C  GR   AR LF SM+ KG + +V  Y ILI+       + +   L   M+   
Sbjct: 314 LLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           + P    +N + +   +   + +A+ + +KM+   + PD   +   ID LCK G V +AV
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAV 433

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
             F  + N      I  +N L+ GLC + + + A + +  + ++G  PDVV  +T++  L
Sbjct: 434 LKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNL 493

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           C +GQ+ KA  L+  ME     P  +++ TL+ G
Sbjct: 494 CTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGG 527



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 268/526 (50%), Gaps = 4/526 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  MI     P   ++  L+       ++  VV + + ++++GL PD +    L+N LC 
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A  +   ++R    PN   +  LI+G   +G + E   L   +      P+   
Sbjct: 321 NGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FN +     +      A+ +F +M  +      PDVV Y ++ID LCK G VD A     
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQG---LSPDVVNYGALIDALCKLGRVDDAVLKFN 437

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           QM +  + PN+  +NSL+ G C VD W++AK  + EM++ G++PDVV FN ++   C  G
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ K  RL++LM + G  P  ++Y +L+ G CLVGRI  A +    M+S G + D ++YN
Sbjct: 498 QVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L++  C+  +++DA  ++REML   I P V+TY+T+L GLF      +A +L   M  +
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
               + + +   ++GL KN  V EA ++FQ++ +   +L I T+N +I  L K GR + A
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             LF  +   G +PDV T   +   L +EG +++ +DL   ME     P+      L+R 
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            +     ++    L K+  EK    + S ++ ++ LLS+D+ +   
Sbjct: 738 LLHRGDITRAGAYLCKL-DEKNFSLEASTTAMLISLLSRDEYHHHA 782



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 240/493 (48%), Gaps = 6/493 (1%)

Query: 35  DLSSHHFK-DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK 93
           ++S+H  K D  +    LN  +   N    EA + FD MI+    P +  + IL+   A 
Sbjct: 298 EMSAHGLKPDCYTYGSLLN--YLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYAT 355

Query: 94  NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVT 153
                 +  L   +  NGL PD  + N++     K  +   A  +  ++ +   +P+ V 
Sbjct: 356 KGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415

Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
           +  LI+ LC  GR+ +A   F ++      PN+  FN+L+ GLC       A + + EM+
Sbjct: 416 YGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML 475

Query: 214 NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
           N+     +PDVV +N+I+  LC  G V KA+ L+  M+     P VI+Y +LI G C V 
Sbjct: 476 NQG---IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVG 532

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
              EA      M+  G++PD  T+N +++  C+ G++D    +   M++ G+ P  VTY+
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +++ G     R S A+EL+++M++ G + +++ YNI++N   K+  V++A  L++ + S+
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             +  + T+N ++  LF+ G   DA+ L   +    +VPD FT+    + L + G++ E 
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             +F A+            N L+  L   G +  A     +L  K    +  T + +I  
Sbjct: 713 DDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISL 772

Query: 514 LCKEGQMDKANDL 526
           L ++     A  L
Sbjct: 773 LSRDEYHHHATSL 785



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 207/446 (46%), Gaps = 17/446 (3%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCR-------TRNTLVALKLFEEMVNEFGAICK 221
           +A +LF  L   A   +V+ FN L+  + R       T  + + + LF  M+ E      
Sbjct: 32  DALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVT 91

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD  TY+ +I   C+ G ++        +       N I  N L+ G C      EA  +
Sbjct: 92  PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151

Query: 282 FIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ---RGVNPDTVTYNSLMD 337
            ++ M   G  PDVV++N ++   C + + ++   LL +M     R   P+ V+Y  +++
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           GF   G++ +A  LF+ M+ +G + +V +Y  +I+  CK Q V+ A  ++++M+ + ++P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
              TYN L+ G   +G   + ++++++M  + + PD +T+ + ++ LC NG   EA  +F
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
            ++     +  +  Y  LI+G    G L     L + +   G  PD    + +     K+
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
             +D+A  +   M+ +   P  V +  L+    +  +    V+  ++M  E +  +    
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 578 SSKVVDLLSKDKK------YRECLNQ 597
           +S V  L + DK       Y E LNQ
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQ 477


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 165/498 (33%), Positives = 255/498 (51%), Gaps = 7/498 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    ++   K+G +  N+A   F  ++    +P   ++T L+  L     +D    
Sbjct: 9   DSWSYGILIDGLAKAGKL--NDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF  +N  G  P     N++I+  CK G+   A  ++ +++     P+ VT+N +++GLC
Sbjct: 67  LFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GR+ EA  LF ++    C PN  + NT+I GLC+      A ++F EM  E   I  P
Sbjct: 127 KSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM--EARDI-PP 183

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D  +Y  +IDGL K G +++A +L  +M D  I P+ +TYN +I G C      EA  LF
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M   G +P   TFN +I+ +CK GKMD+  RLL+ M   G  PD VTY++L+ G C +
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            R+  AR L   MV + C+  V + N LI+  CK  ++++A  +   M+S    P V+TY
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           NTL+ G  + G    A +L+  M    + P+  T+   + GLCK   + EA  VF  +++
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
             C   + TY  LI G C  G++    KLF  +   G  PD V   T+   LCK G+  +
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483

Query: 523 ANDLLLDMEAKNCVPSEV 540
           A ++L   E +  + SE 
Sbjct: 484 ALEIL--REGRESLRSEA 499



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 161/498 (32%), Positives = 263/498 (52%), Gaps = 5/498 (1%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           +N   + PD +   +LI+ L K G  + A  +  ++L S  TP+TV +  LI+GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
             +A  LF  +N   C P+ VT+N +I+  C+      A  L ++M+ E G +  PDVVT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI-EDGHV--PDVVT 117

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN+++DGLCK G V++A  L  +M+     PN  ++N++I G C      +A  +F EM 
Sbjct: 118 YNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
              + PD  ++  +I+   K GK+++  +L   M+  G+ P  VTYN ++ G CL   + 
Sbjct: 178 ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A ELF SM SKGCR   +++NILI+A+CK  K+++A  L + M  +   P V+TY+TL+
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           SGL  +  + DA  L++ M      P   T  T I GLCK G + EA +V  A+ +    
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + TYN L++G C+ G+ + A +L   +  +G  P+VVT + ++  LCK  ++ +A  +
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 417

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
              M++  C P+  T+  L+ GF    +    + L  +M    +    +   +   +L  
Sbjct: 418 FAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCK 477

Query: 587 KDKKYR--ECLNQFRHLL 602
             +  R  E L + R  L
Sbjct: 478 SGRSARALEILREGRESL 495



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 243/473 (51%), Gaps = 11/473 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA      MI+    P + ++  ++  L K+ + +  + LF  +   G  P+    N +
Sbjct: 97  EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTI 156

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  LC+      A  V   +      P++ ++  LI+GL   G++ EA +LF+++     
Sbjct: 157 ILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGI 216

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ VT+N +I+G+C       AL+LF+ M ++    C+P   T+N +ID  CK G +D+
Sbjct: 217 TPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG---CRPSRFTFNILIDAHCKRGKMDE 273

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL +M D    P+V+TY++LI G C +    +A+ L  +M+    +P VVT N +I+
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIH 333

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++ +   +L+ M+  G +PD VTYN+L+ G C  G+  RAREL   MV++G   
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP 393

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V +Y  L++  CK  ++ +A  ++ +M S    P++ TY  L+ G    G +   LKL 
Sbjct: 394 NVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLF 453

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET-----YNCLIN 477
            +M    + PD   + T    LCK+G    A+++   +R  +  LR E      Y   ++
Sbjct: 454 GEMVCAGISPDHVVYGTLAAELCKSGRSARALEI---LREGRESLRSEAWGDEVYRFAVD 510

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           GL   G+++ A      +   G +P    C++++  LCK GQ  +A  +L ++
Sbjct: 511 GLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 110/262 (41%), Gaps = 40/262 (15%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A +  + M+K +  P + +   L+  L K  +      +   + S+G  PD+   N L
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C+ G T  A  +L  ++     PN VT+  L++GLC   R+ EA  +F ++    C
Sbjct: 367 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+  LI G C        LKLF EMV    A   PD V Y ++   LCK G   +
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMVC---AGISPDHVVYGTLAAELCKSGRSAR 483

Query: 243 AKELLLQMKD--------------------------------RNIN-----PNVITYNSL 265
           A E+L + ++                                R++      P      SL
Sbjct: 484 ALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASL 543

Query: 266 ICGFCCVDDWKEAKCLFIEMMD 287
           + G C      EA+ +  E+MD
Sbjct: 544 VAGLCKSGQGGEARAVLEEIMD 565


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 269/506 (53%), Gaps = 4/506 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    +  ++    P   ++ + +  L K ++ D    L K+++     P       L
Sbjct: 24  DEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTAL 83

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ L K G    A  VL +++    +P   T+  +I+GL   GR+ EA R+F  +    C
Sbjct: 84  VDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 143

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            P+   +  LI GLC++     A  L++E    +  A   PDVVTY S+IDGLCK G + 
Sbjct: 144 RPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRIL 203

Query: 242 KAKELL-LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           +A+++   +  +R   P+ +TY S+I G C +   +E    F EM + G +PD VT+ A+
Sbjct: 204 EARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAAL 263

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+   K   + K +R+   M+Q G    TVTYN ++DG C  GR++ A   F++M  +GC
Sbjct: 264 IDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGC 323

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
              V +Y+ L++  C +  V  AV L+R ML     P++++YN ++ GL + G L  A  
Sbjct: 324 VATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYF 383

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKN-GFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
             +K+    + PD +TF  ++ GLC+    V + V++F+++ +      + +Y+ L++G+
Sbjct: 384 YFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGI 443

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C+ G L+ A ++F  +  +G  PDVV  +T+I WLC  G++D+A ++  ++E ++  P  
Sbjct: 444 CRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDA 502

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKM 565
            ++ +LL G  +  +  +  +L   M
Sbjct: 503 WSYWSLLDGLSRCERMEEARLLSFHM 528



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 253/480 (52%), Gaps = 8/480 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A      M + K  P   ++T L+  L K  + D  +++ +++   G  P L    ++
Sbjct: 59  DDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVV 118

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV--- 179
           I+ L K G    A  +   +L +   P+   +  LI GLC  G+  EA  L+K+ N    
Sbjct: 119 IDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKH 178

Query: 180 -FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                P+VVT+ +LI+GLC+    L A ++F++   E G I  PD VTY SIIDGLCK G
Sbjct: 179 HATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFI--PDAVTYTSIIDGLCKLG 236

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V++  E   +M++R   P+ +TY +LI GF       +A  ++ +M+ +G     VT+N
Sbjct: 237 RVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYN 296

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +++  CK G++ +       M +RG     VTY++LMDGFC  G +S A ELF  M+ +
Sbjct: 297 IILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 356

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ-VGNLGD 417
           GC  ++ SYNI+I   C+  K+  A   + ++L  R+ P V T+N  L GL Q +  + D
Sbjct: 357 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSD 416

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
            ++L + M      P+  +++  +DG+C+ G +  A+++F+ + +      +  +N LI 
Sbjct: 417 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIR 476

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
            LC  GR+  A ++F  L+ +   PD  +  +++  L +  +M++A  L   M+ + C P
Sbjct: 477 WLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 234/461 (50%), Gaps = 10/461 (2%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           +P+ V F  +INGLC E R+ EA  + ++     C+P+ VT+N  I+GLC+      A +
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L ++M  +    C P  VTY +++DGL K G +D+A  +L QM ++  +P + TY  +I 
Sbjct: 64  LLKKMDEK---KCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN- 326
           G       +EA+ +F++M+ NG +PD   + A+I   CK GK ++   L +    R  + 
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180

Query: 327 ---PDTVTYNSLMDGFCLVGRISRARELFV-SMVSKGCRHDVYSYNILINANCKDQKVED 382
              PD VTY SL+DG C  GRI  AR++F    V +G   D  +Y  +I+  CK  +VE+
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
               + EM +    P  +TY  L+ G  +   +  A ++  +M  +  V  + T+   +D
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 300

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK G V EA   F A+    C   + TY+ L++G C  G +  A +LF R+  +G  P
Sbjct: 301 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN-NKKSKVVVL 561
           ++V+ + +I  LC+ G++ KA      +  +   P   TF   L G  Q  +  S  V L
Sbjct: 361 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVEL 420

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
              M ++     +L   S ++D + +       L  FR ++
Sbjct: 421 FESMVSQG-TSPNLHSYSILMDGICRAGGLEVALEIFREMV 460



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 5/351 (1%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C PD+V +  +I+GLC++  +D+A  +L +       P+ +TYN  I G C  +   +A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L  +M +    P  VT+ A+++   K G++D+   +LE M+++G +P   TY  ++DG 
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR--- 396
              GR+  AR +FV M+  GCR D + Y  LI   CK  K E+A  LY+E  + +     
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 397 -PSVITYNTLLSGLFQVGNLGDALKLIDKMQLN-DVVPDSFTFATYIDGLCKNGFVLEAV 454
            P V+TY +L+ GL + G + +A ++ D   +    +PD+ T+ + IDGLCK G V E  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           + F  +RN   E    TY  LI+G  K   +  A +++ ++   G +   VT + ++  L
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           CK G++ +A    L ME + CV + VT+  L+ GF      S  V L  +M
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 353



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 170/385 (44%), Gaps = 51/385 (13%)

Query: 24  CSFGRPPNP-----KTDLSSHH---FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKM 75
           C  G+P        + +   HH     D  +    ++   K+G I     V F D  ++ 
Sbjct: 158 CKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQV-FDDEAVER 216

Query: 76  KPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
              P   ++T ++  L K  + +     F  + + G  PD      LI+   K  +   A
Sbjct: 217 GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKA 276

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             V  ++L+S    +TVT+N +++GLC  GR+ EA   F  +    C   VVT++ L++G
Sbjct: 277 HRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDG 336

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK----------- 244
            C   N   A++LF  M++     C+P++V+YN II GLC+ G + KA            
Sbjct: 337 FCSEGNVSAAVELFRRMLDRG---CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 393

Query: 245 -------------------------ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
                                    EL   M  +  +PN+ +Y+ L+ G C     + A 
Sbjct: 394 CPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVAL 453

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            +F EM+  GV PDVV FN +I + C  G++D+   +   + +R   PD  +Y SL+DG 
Sbjct: 454 EIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGL 512

Query: 340 CLVGRISRARELFVSMVSKGC--RH 362
               R+  AR L   M  +GC  RH
Sbjct: 513 SRCERMEEARLLSFHMKLQGCAPRH 537


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 170/584 (29%), Positives = 290/584 (49%), Gaps = 38/584 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G+  S++A   +  M+  + SP + +++ ++  L K +  D  + 
Sbjct: 195 DVVSYTTVINGFFKEGD--SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAME 252

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ P+    N +++  C       A   L ++      P+ VT+N L++ LC
Sbjct: 253 VLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLC 312

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
             GR  EA ++F  +     +P++ T+ TL+ G   T+  LV +    +++   G     
Sbjct: 313 KNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA-TKGALVEMHALLDLMVRNGIHPDH 371

Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                 IC                        P+VVTY ++I  LCK G VD A     Q
Sbjct: 372 HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  + PN+I Y SLI   C  D W +A+ L +EM+D G+  + + FN++I+ +CK+G+
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGR 491

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L +LM++ GV P+ +TY++L+DG+CL G++  A +L  SM S G + D  +YN 
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  C+  +++DA+ L++EM+S  + P++ITYN +L GLF       A +L   +  + 
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
              +  T+   + GLCKN    EA+++FQ +     +L   T+N +I  L K+GR   A 
Sbjct: 612 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 671

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            LF      G +P+  T   M   +  +G +++ + L   ME   C         ++R  
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVREL 731

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           +Q  + ++    L  M  EK    + S +S  +DLLS   KY+E
Sbjct: 732 LQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLS-GGKYQE 773



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 266/544 (48%), Gaps = 40/544 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVL 119
            +A + FD +++      +      L  +A++      VS + R+   G   + P +   
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKVTPTVHTY 90

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLN 178
            +LI C C+ G     F  LG +++  F    +TF  L+ GLCA+ R  +A  +  +++ 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
             +C P+V +   L+ GLC    +  AL+L   M ++ G    PDVV+Y ++I+G  K+G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
             DKA     +M DR I+P+V+TY+S+I   C      +A  +   M+ NGV P+ +T+N
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++++  C   +  +    L+ M   GV PD VTYNSLMD  C  GR + AR++F SM  +
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330

Query: 359 GCRHDVYSY-----------------------------------NILINANCKDQKVEDA 383
           G   D+ +Y                                   NILI A  K +KV++A
Sbjct: 331 GLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + ++ +M    + P+V+TY  ++  L + G++ DA+   ++M    + P+   + + I  
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC      +A ++   + +    L    +N +I+  CK GR+  + KLF  +   G  P+
Sbjct: 451 LCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPN 510

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           V+T ST+I   C  G+MD+A  LL  M +    P  VT+ TL+ G+ + ++    + L  
Sbjct: 511 VITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFK 570

Query: 564 KMAA 567
           +M +
Sbjct: 571 EMVS 574


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 167/558 (29%), Positives = 280/558 (50%), Gaps = 16/558 (2%)

Query: 44  GTSIAKFLNDRHKSGNITSNEAVYFFDCMIKM--KPSPGMTSFTILLTMLAKNKQYDTVV 101
           G    + L    + G I  +EA+  FD M     +  P +    IL+  L  + +     
Sbjct: 150 GEGAKRRLRSLVQRGEI--DEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAE 207

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
            +F  L  +     +   N ++N  C+ G    A  ++  +    F P+T TFN LI  L
Sbjct: 208 RVFAALGPSAT---VVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRAL 261

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  GRI +A  +F  +    C P+VVT++ L++  C+      A+ L +EM  +    C+
Sbjct: 262 CVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKG---CE 318

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD+VTYN +I+ +C +G VD+A  +L  +      P+ +TY  ++   C  + WKE + L
Sbjct: 319 PDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEEL 378

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             EM  N   PD VTFN ++   C+ G +D+   +++ M + G   D VTY+S++DG C 
Sbjct: 379 LAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCD 438

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           VGR+  A EL   + S GC+ D  +Y  ++   C  ++ E A  L  EML     P  +T
Sbjct: 439 VGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVT 498

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +NT+++ L Q G +  A++++++M  N   PD  T+   IDGLC    + +A+++   ++
Sbjct: 499 FNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQ 558

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +C C+  I T+N L+ GLC + R + A +L   +      PD +T +T+I  LC++G + 
Sbjct: 559 SCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLT 618

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A + L  M    CVP+  T+  ++   ++  K    + LL  M        DL   + V
Sbjct: 619 QAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG---TPDLITYNTV 675

Query: 582 VDLLSKDKKYRECLNQFR 599
           +  L+K  K  E L+  R
Sbjct: 676 ISNLTKAGKMEEALDLLR 693



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/491 (31%), Positives = 256/491 (52%), Gaps = 5/491 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  FD M+    SP + +++ILL    K   Y   ++L   + + G  PD+   N+LI
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLI 328

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N +C  G    A  +L  +      P+ VT+  ++  LC   R  E   L  ++    C 
Sbjct: 329 NAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA 388

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VTFNT++  LC+      A+++ + M +E G  C  D+VTY+SI+DGLC  G VD A
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHM-SEHG--CVADIVTYSSILDGLCDVGRVDDA 445

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ELL ++K     P+ I Y +++ G C  + W+ A+ L  EM+ +   PD VTFN ++  
Sbjct: 446 VELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVAS 505

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G +D+  R++E M + G +PD VTYN ++DG C    I  A EL   + S GC+ D
Sbjct: 506 LCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + ++N L+   C   + EDA  L   M+     P  +T+NT+++ L Q G L  A++ + 
Sbjct: 566 IVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLK 625

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M  N  VP+S T++  +D L K G    A+++   + N   +L   TYN +I+ L K G
Sbjct: 626 IMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLI--TYNTVISNLTKAG 683

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +++ A  L   +   G  PD  T  ++ + +C+E   D+A  +L  ++     P    + 
Sbjct: 684 KMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYN 743

Query: 544 TLLRGFVQNNK 554
            +L GF ++ +
Sbjct: 744 DVLLGFCRDRR 754



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 259/524 (49%), Gaps = 6/524 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +F  L+  L    +    +++F  +   G  P +   ++L++  CK      A  +
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMAL 308

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +      P+ VT+N LIN +C EG + EA  +   L    C P+ VT+  ++  LC 
Sbjct: 309 LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCG 368

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           +       +L  EM +     C PD VT+N+I+  LC+ G VD+A E++  M +     +
Sbjct: 369 SERWKEVEELLAEMTSNN---CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVAD 425

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           ++TY+S++ G C V    +A  L   +   G +PD + +  ++   C   + ++   L+ 
Sbjct: 426 IVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMA 485

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+     PD VT+N+++   C  G + RA  +   M   GC  D+ +YN +I+  C + 
Sbjct: 486 EMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNES 545

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++DA+ L  ++ S   +P ++T+NTLL GL  V    DA +L+  M  ++  PD  TF 
Sbjct: 546 CIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFN 605

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T I  LC+ G + +A++  + +    C     TY+ +++ L K G+ + A +L   + + 
Sbjct: 606 TVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG 665

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
              PD++T +T+I  L K G+M++A DLL  M +    P   T+ +L  G  + +   + 
Sbjct: 666 --TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRA 723

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           V +L ++    L   D +  + V+    +D++    ++ F H++
Sbjct: 724 VRMLRRVQDTGL-SPDTTFYNDVLLGFCRDRRTDLAIDCFAHMV 766



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 234/455 (51%), Gaps = 11/455 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++T +L  L  ++++  V  L   + SN   PD    N ++  LC+ G+   A  V
Sbjct: 354 PDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEV 413

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  +       + VT++ +++GLC  GR+ +A  L  +L  + C P+ + + T++ GLC 
Sbjct: 414 VDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCS 473

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           T     A +L  EM     + C PD VT+N+++  LC+ G VD+A  ++ QM +   +P+
Sbjct: 474 TEQWERAEELMAEM---LCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPD 530

Query: 259 VITYNSLICGFC---CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           ++TYN +I G C   C+DD  E   L  ++   G +PD+VTFN ++   C   + +   +
Sbjct: 531 IVTYNCIIDGLCNESCIDDAME---LLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQ 587

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L+  M++    PD +T+N+++   C  G +++A E    M   GC  +  +Y+I+++A  
Sbjct: 588 LMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALL 647

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K  K + A+ L   M +    P +ITYNT++S L + G + +AL L+  M  N + PD+ 
Sbjct: 648 KAGKAQAALELLSGMTNGT--PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTT 705

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+ +   G+C+      AV++ + +++         YN ++ G C+  R   A   F  +
Sbjct: 706 TYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHM 765

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
              G +PD  T   ++  L   G +D+A  LL  +
Sbjct: 766 VSSGCMPDESTYVILLEALAYGGLLDEAKRLLASL 800



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 5/297 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+   + M +   SP + ++  ++  L      D  + L   L S G  PD+   N L
Sbjct: 513 DRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTL 572

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC +     A  ++  ++RS   P+ +TFN +I  LC +G + +A    K +    C
Sbjct: 573 LKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGC 632

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN  T++ +++ L +      AL+L   M N       PD++TYN++I  L K G +++
Sbjct: 633 VPNSSTYSIVVDALLKAGKAQAALELLSGMTNG-----TPDLITYNTVISNLTKAGKMEE 687

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL  M    + P+  TY SL  G C  D    A  +   + D G+ PD   +N ++ 
Sbjct: 688 ALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLL 747

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             C+D + D        M+  G  PD  TY  L++     G +  A+ L  S+ S G
Sbjct: 748 GFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLG 804


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 164/498 (32%), Positives = 260/498 (52%), Gaps = 20/498 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            E   F + M+     P + + T L+  L K  +      + + L  +G  PD+   N+L
Sbjct: 127 EEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVL 186

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK G    A  +L R+     +P+ VT+N ++  LC  G++ EA  +  +     C
Sbjct: 187 ISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQREC 243

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V+T+  LI   C+      A+KL +EM ++    CKPDVVTYN +I+G+CK+G +D+
Sbjct: 244 YPDVITYTILIEATCKESGVGQAMKLLDEMRDKG---CKPDVVTYNVLINGICKEGRLDE 300

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A   L  M      PNVIT+N ++   C    W +A+    EM+  G  P VVTFN +IN
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           + C+ G + +   +LE M Q G  P++++YN L+   C   ++ RA E    MVS+GC  
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYP 420

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +YN L+ A CKD KV+ AV +  ++ S+   P +ITYNT++ GL +VG   DA+KL+
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M+   + PD  T++T + GL + G V EA+  F  +     +    TYN ++ GLCK 
Sbjct: 481 DEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKA 540

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            +   A      +  +G  P   +   +I  L  EG   +A +LL ++            
Sbjct: 541 RQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL------------ 588

Query: 543 CTLLRGFVQNNKKSKVVV 560
           C+  RG V+ +   +VVV
Sbjct: 589 CS--RGVVKKSSAEQVVV 604



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 256/484 (52%), Gaps = 6/484 (1%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L  L +N + +      + +   G  PD+     LI  LCK G T  A  V+  +  S  
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+ +T+N LI+G C  G I  A +L  +++V    P+VVT+NT++  LC +     A++
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKEAME 233

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           + +  +      C PDV+TY  +I+  CK+  V +A +LL +M+D+   P+V+TYN LI 
Sbjct: 234 VLDRQMQRE---CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C      EA      M   G QP+V+T N ++   C  G+     + L  MI++G +P
Sbjct: 291 GICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSP 350

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             VT+N L++  C  G I RA ++   M   GC  +  SYN L++A CKD+K+E A+   
Sbjct: 351 SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYL 410

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             M+S    P ++TYNTLL+ L + G +  A+++++++      P   T+ T IDGL K 
Sbjct: 411 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKV 470

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G   +A+++   ++    +  I TY+ L+ GL + G++  A   FH L+  G  P+ +T 
Sbjct: 471 GKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITY 530

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           ++++  LCK  Q  +A D L  M A+ C P+E ++  L+ G        + + LL+++ +
Sbjct: 531 NSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCS 590

Query: 568 EKLV 571
             +V
Sbjct: 591 RGVV 594



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 214/415 (51%), Gaps = 7/415 (1%)

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           V  N  +  L R        K  E+MV   G I  PD++   S+I GLCK G   KA  +
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCR-GDI--PDIIACTSLIRGLCKTGKTWKATRV 167

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           +  ++D    P+VITYN LI G+C   +   A  L   M    V PDVVT+N ++   C 
Sbjct: 168 MEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCD 224

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            GK+ +   +L+  +QR   PD +TY  L++  C    + +A +L   M  KGC+ DV +
Sbjct: 225 SGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVT 284

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN+LIN  CK+ ++++A+     M S   +P+VIT+N +L  +   G   DA K + +M 
Sbjct: 285 YNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMI 344

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                P   TF   I+ LC+ G +  A+ V + +    C     +YN L++ LCK  +++
Sbjct: 345 RKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKME 404

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +    +  +G  PD+VT +T++  LCK+G++D A ++L  + +K C P  +T+ T++
Sbjct: 405 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVI 464

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            G  +  K    + LL +M  + L   D+   S +V  LS++ K  E +  F  L
Sbjct: 465 DGLSKVGKTDDAIKLLDEMKGKGL-KPDIITYSTLVGGLSREGKVDEAIAFFHDL 518


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 155/443 (34%), Positives = 248/443 (55%), Gaps = 3/443 (0%)

Query: 60   ITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
            I  ++A   F  M++ +P P +  FT +LT +AK  ++D V+ LF ++ + G+  DL+  
Sbjct: 594  IKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSF 653

Query: 120  NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
             +LI+C C+    S A  +LG++++  F P+ VT   L+NG C   R  EA  L   +  
Sbjct: 654  TILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713

Query: 180  FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               +PNVV +NT+INGLC+ R+   AL++F  M  + G +   D VTYN++I GLC  G 
Sbjct: 714  LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK-GIV--ADAVTYNTLISGLCNSGR 770

Query: 240  VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
               A  LL  M  R I+PNVI + +LI  F    +  EAK L+ EM+   V P+++T+N+
Sbjct: 771  WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNS 830

Query: 300  MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
            +IN  C  G++     + +LM+ +G  PD VTYN+L+ GFC   R+    +LF  M  +G
Sbjct: 831  LINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQG 890

Query: 360  CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
               D ++YN LI+  C+  K+  A  ++  M+   + P ++TYN LL  L   G +  AL
Sbjct: 891  LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKAL 950

Query: 420  KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
             +++ +Q N +  D  T+   I G+C+N  V EA  +F+++     +L    Y  +I+GL
Sbjct: 951  VMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010

Query: 480  CKMGRLKTACKLFHRLQHKGPIP 502
            C+ G  + A KL  R++  G +P
Sbjct: 1011 CRNGLRREADKLCTRMKEDGFMP 1033



 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 162/479 (33%), Positives = 256/479 (53%), Gaps = 39/479 (8%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           +I   +A+  F  M++ +P P +  FT LLT +A  ++Y+TV+   +++   G+  DL+ 
Sbjct: 43  SIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYS 102

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
             +LI+C C+    S A  +L                         G++M+         
Sbjct: 103 FTILIHCFCRCSRLSLALSIL-------------------------GKMMK--------- 128

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               DP++VTF +L++G C       A  L   MV    +  +P+VV YN++ID LCK+G
Sbjct: 129 -LGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVK---SGYEPNVVVYNTLIDCLCKNG 184

Query: 239 FVDKAKELLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
            V+ A ELL +M+ +  +  +++TYN+L+ G C   +W++A  +  +M    + PDV TF
Sbjct: 185 DVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTF 244

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
            A+I+   K G +D+   L + M+Q  + P+TVTYNSL++G C+ GR+  A++ F  M S
Sbjct: 245 TALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMAS 304

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           KGC  +V +YN LIN  CK ++VED + L++ M  E +     TYNTL+ G  QVG L  
Sbjct: 305 KGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRV 364

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A  +   M    V PD  T    + GLC NG +  A+  F  +R+ +  L I  YN +I+
Sbjct: 365 AKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIH 424

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           GLCK  +++ A +LF RL  +G  PD  T + MI  LCK G   +A++L   M+    +
Sbjct: 425 GLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGII 483



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 222/440 (50%), Gaps = 3/440 (0%)

Query: 135  AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
            AF +   +L+S   P+ V F  ++  +    +      LF K+       ++ +F  LI+
Sbjct: 599  AFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658

Query: 195  GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
              CR     +AL L  +M+ + G   +P +VT  S+++G C+     +A  L+  M +  
Sbjct: 659  CFCRCSRFSLALALLGKMM-KLGF--QPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715

Query: 255  INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
            + PNV+ YN++I G C   D   A  +F  M   G+  D VT+N +I+  C  G+     
Sbjct: 716  LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775

Query: 315  RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            RLL  M++R ++P+ + + +L+D F   G +  A+ L+  M+ +    ++ +YN LIN  
Sbjct: 776  RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835

Query: 375  CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            C   ++ DA  ++  M+S+   P V+TYNTL++G  +   + D +KL  +M    +V D+
Sbjct: 836  CIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDA 895

Query: 435  FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            FT+ T I G C+ G +  A +VF  + +C     I TYN L++ LC  G+++ A  +   
Sbjct: 896  FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVED 955

Query: 495  LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            LQ      D++T + +I  +C+  ++ +A  L   +  K      + + T++ G  +N  
Sbjct: 956  LQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGL 1015

Query: 555  KSKVVVLLHKMAAEKLVVSD 574
            + +   L  +M  +  + S+
Sbjct: 1016 RREADKLCTRMKEDGFMPSE 1035



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 207/424 (48%), Gaps = 4/424 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ V F  L+  +    R        +++ +F    ++ +F  LI+  CR     +AL +
Sbjct: 63  PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M+ + G    P +VT+ S++ G C    +  A  L+  M      PNV+ YN+LI  
Sbjct: 123 LGKMM-KLGY--DPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDC 179

Query: 269 FCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            C   D   A  L  EM   G +  D+VT+N ++   C  G+  +  R+L  M +R +NP
Sbjct: 180 LCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINP 239

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  T+ +L+D F   G +  A+EL+  M+      +  +YN LIN  C   ++  A   +
Sbjct: 240 DVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTF 299

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             M S+   P+V+TYNTL++G  +   + D +KL  +M    +V D+FT+ T I G C+ 
Sbjct: 300 DLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQV 359

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G +  A  +F  + +C     I T+  L++GLC  G + +A   F+ ++       +V  
Sbjct: 360 GKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAY 419

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + MIH LCK  ++++A +L   +  +   P   T+  ++ G  +N  + +   L  +M  
Sbjct: 420 NIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKE 479

Query: 568 EKLV 571
           + ++
Sbjct: 480 DGII 483



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 152/603 (25%), Positives = 268/603 (44%), Gaps = 63/603 (10%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           +G I S  A+  F+ M   +   G+ ++ I++  L K  + +    LF RL   G+ PD 
Sbjct: 394 NGEIGS--AMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDA 451

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRI-------------LRSCFTPNTVTFNFLINGLCA 163
               ++I  LCK G    A  +  R+             L    T N V+   +I  +C 
Sbjct: 452 RTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTII--ICP 509

Query: 164 EGR--IMEAARLFKKLNVFACDPNVVTF-----NTLINGLCRTRNTLVAL---------- 206
           + R  IME+  L+   +      ++V       ++ + G  R    L+            
Sbjct: 510 KRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFS 569

Query: 207 ----------------KLFEEMV-----NEFGAICK-------PDVVTYNSIIDGLCKDG 238
                           +L  E+      + FG  C+       P +V +  ++  + K  
Sbjct: 570 GASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMN 629

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
             D    L  +M++  I+ ++ ++  LI  FC    +  A  L  +MM  G QP +VT  
Sbjct: 630 KFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLG 689

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           +++N  C+  +  +   L++ M + G+ P+ V YN++++G C    ++ A E+F  M  K
Sbjct: 690 SLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK 749

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   D  +YN LI+  C   +  DA  L R+M+  +I P+VI +  L+    + GNL +A
Sbjct: 750 GIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 809

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L  +M    V P+  T+ + I+G C  G + +A  +F  + +  C   + TYN LI G
Sbjct: 810 KNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITG 869

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK  R++   KLF  + H+G + D  T +T+IH  C+ G+++ A  +   M      P 
Sbjct: 870 FCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPD 929

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            VT+  LL     N K  K +V++  +   ++ V D+   + ++  + ++ K +E    F
Sbjct: 930 IVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDV-DIITYNIIIQGMCRNDKVKEAWCLF 988

Query: 599 RHL 601
           R L
Sbjct: 989 RSL 991



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 187/386 (48%), Gaps = 4/386 (1%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL LF EMV    +   P VV +  ++  +      +       QM+   I+ ++ ++  
Sbjct: 49  ALDLFLEMVQ---SQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTI 105

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI  FC       A  +  +MM  G  P +VTF ++++  C   ++     L+  M++ G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDA 383
             P+ V YN+L+D  C  G ++ A EL   M  KG    D+ +YN L+   C   +   A
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             + R+M   RI P V T+  L+    + GNL +A +L  +M  + + P++ T+ + I+G
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC +G +  A + F  + +  C   + TYN LING CK  R++   KLF R+  +G + D
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
             T +T+IH  C+ G++  A D+   M +    P  +T C LL G   N +    +V  +
Sbjct: 346 TFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFN 405

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDK 589
            M + +  +  ++ +  +  L   DK
Sbjct: 406 DMRSGEKYLGIVAYNIMIHGLCKADK 431



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 144/604 (23%), Positives = 255/604 (42%), Gaps = 75/604 (12%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A      M K + +P + +FT L+    K    D    L+K++  + + P+    N LI
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLI 283

Query: 124 NCLCKMGITSGA---FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           N LC  G    A   F ++    + CF PN VT+N LING C   R+ +  +LF+++   
Sbjct: 284 NGLCMHGRLYHAKKTFDLMAS--KGCF-PNVVTYNTLINGFCKSRRVEDGMKLFQRMYRE 340

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN---------------------EFG-A 218
               +  T+NTLI+G C+     VA  +F  MV+                     E G A
Sbjct: 341 GLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSA 400

Query: 219 ICKPD----------VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           + K +          +V YN +I GLCK   V++A EL  ++    + P+  TY  +I G
Sbjct: 401 MVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILG 460

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN--------RLLELM 320
            C     +EA  LF  M     + D +   A   +  + G  ++V+        +    +
Sbjct: 461 LCKNGPRREADELFRRM-----KEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSI 515

Query: 321 IQRG----VNPDTVTYNSLMDGFCLVGRISRAREL---FVSMVSKGCRHDVYS------- 366
           ++ G       DT  ++SL+ G   +   S  +      + ++ +G   +  S       
Sbjct: 516 MESGDLYYYYSDTTLWSSLV-GLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHH 574

Query: 367 --------YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
                   Y   + +     K +DA  L+ EML  R  PS++ +  +L+ + ++      
Sbjct: 575 HHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIV 634

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           + L  KM+   +  D ++F   I   C+      A+ +   +     +  I T   L+NG
Sbjct: 635 IYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNG 694

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            C+  R + A  L   +   G  P+VV  +T+I+ LCK   ++ A ++   ME K  V  
Sbjct: 695 FCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVAD 754

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            VT+ TL+ G   + + +    LL  M   K +  ++   + ++D   K+    E  N +
Sbjct: 755 AVTYNTLISGLCNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEAKNLY 813

Query: 599 RHLL 602
           + ++
Sbjct: 814 KEMI 817



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 152/323 (47%), Gaps = 36/323 (11%)

Query: 268 GFCCVDDWKEAKCLFIEMMDN-----------------------------------GVQP 292
           GF     +++A  LF+EM+ +                                   G+  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D+ +F  +I+  C+  ++     +L  M++ G +P  VT+ SL+ GFCL  RI  A  L 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQ 411
            SMV  G   +V  YN LI+  CK+  V  A+ L  EM  + R+   ++TYNTLL+GL  
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G    A +++  M    + PD FTF   ID   K G + EA ++++ +          T
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN LINGLC  GRL  A K F  +  KG  P+VVT +T+I+  CK  +++    L   M 
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338

Query: 532 AKNCVPSEVTFCTLLRGFVQNNK 554
            +  V    T+ TL+ G+ Q  K
Sbjct: 339 REGLVGDTFTYNTLIHGYCQVGK 361



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 1/259 (0%)

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L  GF    R   A +LF+ MV       V  +  L+ A    ++ E  +   ++M    
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I   + ++  L+    +   L  AL ++ KM      P   TF + + G C    + +A 
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI-PDVVTCSTMIHW 513
            +  ++     E  +  YN LI+ LCK G +  A +L + ++ KG +  D+VT +T++  
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           LC  G+  +A  +L DM  +   P   TF  L+  FV+     +   L  +M    +  +
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 574 DLSLSSKVVDLLSKDKKYR 592
            ++ +S +  L    + Y 
Sbjct: 276 TVTYNSLINGLCMHGRLYH 294



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 2/225 (0%)

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           + EDA+ L+ EM+  +  PSV+ +  LL+ +  +      +    +M+L  +  D ++F 
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I   C+   +  A+ +   +     +  I T+  L++G C   R+  A  L   +   
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE-VTFCTLLRGFVQNNKKSK 557
           G  P+VV  +T+I  LCK G ++ A +LL +ME K  + ++ VT+ TLL G   + +  +
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQ 224

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
              +L  M   + +  D+   + ++D   K     E    ++ +L
Sbjct: 225 AARILRDMTKRR-INPDVFTFTALIDAFVKQGNLDEAQELYKQML 268


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 174/586 (29%), Positives = 293/586 (50%), Gaps = 42/586 (7%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G+  S++A   +  M+     P + ++  ++  L K +  D  + 
Sbjct: 195 DVVSYTTVINGFFKEGD--SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAME 252

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ PD    N +++  C  G    A   L ++      P+ VT++ L++ LC
Sbjct: 253 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC 312

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
             GR MEA ++F  +      P + T+ TL+ G   T+  LV +    +++   G     
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPDH 371

Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                 IC                        P+ VTY ++I  LCK G V+ A     Q
Sbjct: 372 YVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  ++P  I YNSLI G C  + W+ A+ L +EM+D G+  + + FN++I+ +CK+G+
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L ELM++ GV P+ +TYN+L++G+CL G++  A +L   MVS G + +  +Y+ 
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  CK  ++EDA+ L++EM S  + P +ITYN +L GLFQ      A +L  ++  + 
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE--TYNCLINGLCKMGRLKT 487
              +  T+   + GLCKN    +A+Q+FQ +  C  +L++E  T+N +I+ L K+GR   
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNL--CLMDLKLEARTFNIMIDALLKVGRNDE 669

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  LF      G +P+  T   M   +  +G +++ + L L ME   C         ++R
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 729

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             +Q  + ++    L  M  EK    + S +S  +DLLS   KY+E
Sbjct: 730 ELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLS-GGKYQE 773



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/613 (26%), Positives = 285/613 (46%), Gaps = 76/613 (12%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVL 119
            +A + FD +++      +      L  +A++      VS + R+   G   + PDL   
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTY 90

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLN 178
            +LI C C+ G     F  LG +++  F  + + F  L+ GLCA+ R  +A  +  +++ 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C PNV ++N L+ GLC    +  AL+L   M ++ G    PDVV+Y ++I+G  K+G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLIC------------------------------- 267
             DKA     +M DR I P+V+TYNS+I                                
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 268 ----GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
               G+C     KEA     +M  +GV+PDVVT++ +++Y CK+G+  +  ++ + M +R
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P+  TY +L+ G+   G +     L   MV  G   D Y ++ILI A     KV+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + ++ +M  + + P+ +TY  ++  L + G + DA+   ++M    + P +  + + I G
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450

Query: 444 L-----------------------------------CKNGFVLEAVQVFQAIRNCKCELR 468
           L                                   CK G V+E+ ++F+ +     +  
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + TYN LING C  G++  A KL   +   G  P+ VT ST+I+  CK  +M+ A  L  
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +ME+    P  +T+  +L+G  Q  +++     L+    E     +LS  + ++  L K+
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQ-TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629

Query: 589 KKYRECLNQFRHL 601
           K   + L  F++L
Sbjct: 630 KLTDDALQMFQNL 642


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 174/586 (29%), Positives = 293/586 (50%), Gaps = 42/586 (7%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G+  S++A   +  M+     P + ++  ++  L K +  D  + 
Sbjct: 195 DVVSYTTVINGFFKEGD--SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAME 252

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ PD    N +++  C  G    A   L ++      P+ VT++ L++ LC
Sbjct: 253 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC 312

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
             GR MEA ++F  +      P + T+ TL+ G   T+  LV +    +++   G     
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPDH 371

Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                 IC                        P+ VTY ++I  LCK G V+ A     Q
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  ++P  I YNSLI G C  + W+ A+ L +EM+D G+  + + FN++I+ +CK+G+
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L ELM++ GV P+ +TYN+L++G+CL G++  A +L   MVS G + +  +Y+ 
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  CK  ++EDA+ L++EM S  + P +ITYN +L GLFQ      A +L  ++  + 
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE--TYNCLINGLCKMGRLKT 487
              +  T+   + GLCKN    +A+Q+FQ +  C  +L++E  T+N +I+ L K+GR   
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNL--CLMDLKLEARTFNIMIDALLKVGRNDE 669

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  LF      G +P+  T   M   +  +G +++ + L L ME   C         ++R
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 729

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             +Q  + ++    L  M  EK    + S +S  +DLLS   KY+E
Sbjct: 730 ELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLS-GGKYQE 773



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 171/613 (27%), Positives = 284/613 (46%), Gaps = 76/613 (12%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVL 119
            +A + FD +++      +      L  +A++      VS + R+   G   + PDL   
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTY 90

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLN 178
            +LI C C+ G     F  LG +++  F  + + F  L+ GLCA+ R  +A  +  +++ 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C PNV ++N L+ GLC    +  AL+L   M ++ G    PDVV+Y ++I+G  K+G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLIC------------------------------- 267
             DKA     +M DR I P+V+TYNS+I                                
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 268 ----GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
               G+C     KEA     +M  +GV+PDVVT++ +++Y CK+G+  +  ++ + M +R
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV--- 380
           G+ P+  TY +L+ G+   G +     L   MV  G   D Y ++ILI A  K  KV   
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390

Query: 381 --------------------------------EDAVCLYREMLSERIRPSVITYNTLLSG 408
                                           EDA+  + +M+ E + P  I YN+L+ G
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L        A +LI +M    +  ++  F + ID  CK G V+E+ ++F+ +     +  
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + TYN LING C  G++  A KL   +   G  P+ VT ST+I+  CK  +M+ A  L  
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +ME+    P  +T+  +L+G  Q  +++     L+    E     +LS  + ++  L K+
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQ-TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629

Query: 589 KKYRECLNQFRHL 601
           K   + L  F++L
Sbjct: 630 KLTDDALQMFQNL 642


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 162/478 (33%), Positives = 256/478 (53%), Gaps = 3/478 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+     P +T+F IL+  L +  Q    + + + + S GL PD      L+    + G 
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            +GA  +  +++ +    + VT N L++G C EGRI E      +++     P+  TFN+
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNS 321

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+NGLCR  +   AL++ + M+ E      PD+ TYNS+I GLCK G V++A E+L QM 
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEG---FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI 378

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R+ +PN +TYN+LI   C  +  +EA  L   +   G+ PDV TFN++I   C      
Sbjct: 379 LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHR 438

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               L E M  +G +PD  TYN L+D  C  GR+  A  L   M S GC  +V +YN LI
Sbjct: 439 LAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLI 498

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CK++++E+A  ++ EM  + I  +V+TYNTL+ GL +   + +A +L+D+M +  + 
Sbjct: 499 DGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLK 558

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD FT+ + +   C+ G + +A  + Q + +  CE    TY  LI GL K GR++ A +L
Sbjct: 559 PDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRL 618

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
              +Q KG +    T + +I  L +E +  +A  L  +M  K   P  VT+  + RG 
Sbjct: 619 LRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGL 676



 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 157/521 (30%), Positives = 265/521 (50%), Gaps = 5/521 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           +F IL+   AK + +D  V++   +    GL  D F  N L+N L          +V  R
Sbjct: 142 TFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSR 201

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           ++     P+  TFN LI  LC   +I  A  + +++  +   P+  TF TL+ G     N
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              AL++ E+MV    A C    VT N ++ G CK+G +++    + +M +    P+  T
Sbjct: 262 MNGALRIREQMV---AAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFT 318

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +NSL+ G C +   K A  +   M+  G  PD+ T+N++I   CK G++++   +L  MI
Sbjct: 319 FNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI 378

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            R  +P+TVTYN+L+   C   ++  A EL   + SKG   DV ++N LI   C      
Sbjct: 379 LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHR 438

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A+ L+ EM ++   P   TYN L+  L   G L +AL L+ +M+ +    +  T+ T I
Sbjct: 439 LAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLI 498

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DG CKN  + EA ++F  +        + TYN LI+GLCK  R++ A +L  ++  +G  
Sbjct: 499 DGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLK 558

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           PD  T ++++ + C+ G + KA D++  M +  C P  VT+ TL+ G  +  +      L
Sbjct: 559 PDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRL 618

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           L  +  + +V++  + +  V+  L ++K+  E +  FR ++
Sbjct: 619 LRTVQLKGMVLAPQTYNP-VIKALFREKRTSEAVRLFREMM 658



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 152/449 (33%), Positives = 233/449 (51%), Gaps = 6/449 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I   E + F D M      P   +F  L+  L +       + +   +   G  PD
Sbjct: 293 KEGRI--EEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPD 350

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F  N LI  LCK+G    A  +L +++   F+PNTVT+N LI+ LC E ++ EA  L +
Sbjct: 351 IFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELAR 410

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            L      P+V TFN+LI GLC T N  +A++LFEEM  +    C PD  TYN +ID LC
Sbjct: 411 VLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG---CHPDEFTYNMLIDSLC 467

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
             G +++A  LL +M+    + NV+TYN+LI GFC     +EA+ +F EM   G+  +VV
Sbjct: 468 SRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVV 527

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I+  CK+ ++++  +L++ M+  G+ PD  TYNSL+  FC  G I +A ++  +M
Sbjct: 528 TYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTM 587

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            S GC  D  +Y  LI    K  +VE A  L R +  + +  +  TYN ++  LF+    
Sbjct: 588 TSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRT 647

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL-EAVQVFQAIRNCKCELRIETYNC 474
            +A++L  +M      PD+ T+     GLC  G  + EAV     + +        ++  
Sbjct: 648 SEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLM 707

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           L  GLC +    T  KL +R+  +    D
Sbjct: 708 LAEGLCALSMEDTLIKLVNRVMKQANFSD 736



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 233/457 (50%), Gaps = 5/457 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F P++V +  ++  L  +G      R+ +++    C+    TF  LI    +      A+
Sbjct: 101 FVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAV 160

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL-LQMKDRNINPNVITYNSL 265
            + + M  EFG   K D  TYN +++ L  DG   K  E++  +M  R I P+V T+N L
Sbjct: 161 AVVDIMEEEFG--LKLDAFTYNFLLNVLV-DGNKLKLVEIVNSRMVSRGIKPDVTTFNIL 217

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I   C     + A  +  EM   G+ PD  TF  ++    ++G M+   R+ E M+  G 
Sbjct: 218 IKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGC 277

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
               VT N L+ G+C  GRI         M ++G R D +++N L+N  C+   V+ A+ 
Sbjct: 278 PSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALE 337

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           +   ML E   P + TYN+L+ GL ++G + +A++++++M L D  P++ T+ T I  LC
Sbjct: 338 ILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLC 397

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K   V EA ++ + + +      + T+N LI GLC     + A +LF  ++ KG  PD  
Sbjct: 398 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEF 457

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T + +I  LC  G++++A  LL +ME+  C  + VT+ TL+ GF +N +  +   +  +M
Sbjct: 458 TYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM 517

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             + +  + ++ ++ ++D L K+++  E       +L
Sbjct: 518 ELQGISRNVVTYNT-LIDGLCKNRRVEEAAQLMDQML 553


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/444 (34%), Positives = 256/444 (57%), Gaps = 10/444 (2%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           +  +G +P+    N L++ LC  G  S A  +  R++++ ++P+ VT+N L++G C  G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           + EA ++F         P+VVT+N LING C+      A ++ + MV+E      PDVVT
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN---LVPDVVT 117

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC-CVDDWKEAKCLFIEM 285
           YNS+++GLCK+G VD+A+ L++   D+  +PNVITY++LI G C  +    EA  LF  +
Sbjct: 118 YNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSV 174

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           +  G +P+V T+N +I+   K+ ++++   L   +++ G+ PD +TY   +DG C  GR+
Sbjct: 175 LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A  +   M  KGC  DV S+N +IN  CK+++V++A  L   M ++   P+ I++NTL
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK---NGFVLEAVQVFQAIRN 462
           + G  + G    A+    +M    V P   T+   +DGLCK    G + EA+ +F A+  
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 + TY+ LI+GL K G+L  A +L   ++ KG IP+V T +++I  LC   ++D+
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDE 414

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLL 546
           A +L + M  K CVP  +T+ T++
Sbjct: 415 ALELFVAMVEKGCVPDTITYGTII 438



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/432 (35%), Positives = 250/432 (57%), Gaps = 11/432 (2%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F PN +T+N L++GLC  GR+ +A  L++++      P+VVT+NTL++G C+      AL
Sbjct: 6   FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEAL 65

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           K+F+  V   G +  PDVVTYN++I+G CK   +D+A+ +L +M   N+ P+V+TYNSL+
Sbjct: 66  KIFDGAVKR-GFV--PDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLV 122

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK-MDKVNRLLELMIQRGV 325
            G C      EA+ L +   D G  P+V+T++ +I+  C++ + + +  +L   ++++G 
Sbjct: 123 NGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P+  TYN L+DG     R++ A ELF  +V  G   D  +Y + I+  CK  +VEDA+ 
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           + ++M  +   P V+++N +++GL +   + +A  L+  M+     P++ +F T I G C
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM---GRLKTACKLFHRLQHKGPIP 502
           + G   +A+  F+ +     +  + TYN L++GLCK    GR+K A  LF  +  KG +P
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           DVVT S +I  L K G++D A  LL  MEAK C+P+  T+ +L+ G     K  + + L 
Sbjct: 360 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELF 419

Query: 563 HKMAAEKLVVSD 574
             M  EK  V D
Sbjct: 420 VAM-VEKGCVPD 430



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/437 (32%), Positives = 239/437 (54%), Gaps = 10/437 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  LL+ L    +     +L++R+   G  PD+   N L++  CK+G    A  +
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
               ++  F P+ VT+N LING C   ++ EA R+ +++      P+VVT+N+L+NGLC+
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD-GFVDKAKELLLQMKDRNINP 257
                 A  L  +    F     P+V+TY+++I GLC++   V +A +L   +  +   P
Sbjct: 128 NGRVDEARMLIVD--KGF----SPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEP 181

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
            V TYN LI G    D   EA  LF  ++ +G++PD +T+   I+  CK G+++    +L
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 241

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M ++G  PD V++N++++G C   R+  A  L   M +KGC  +  S+N LI   C+ 
Sbjct: 242 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 301

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGL---FQVGNLGDALKLIDKMQLNDVVPDS 434
            K + A+  ++EML   ++P+V+TYN L+ GL    Q G + +A+ L D M     VPD 
Sbjct: 302 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 361

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T++  IDGL K G + +A ++  A+    C   + TYN LI+GLC + ++  A +LF  
Sbjct: 362 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVA 421

Query: 495 LQHKGPIPDVVTCSTMI 511
           +  KG +PD +T  T+I
Sbjct: 422 MVEKGCVPDTITYGTII 438



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 143/425 (33%), Positives = 232/425 (54%), Gaps = 12/425 (2%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
            G ++  +A+Y  + MIK   SP + ++  LL    K  + D  + +F      G  PD+
Sbjct: 23  GGRMSDAQALY--ERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDV 80

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              N LIN  CK      A  +L R++     P+ VT+N L+NGLC  GR+ EA  L   
Sbjct: 81  VTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD 140

Query: 177 LNVFACDPNVVTFNTLINGLCRT-RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
                  PNV+T++TLI+GLCR  R    ALKLF  ++ +     +P+V TYN +IDGL 
Sbjct: 141 KGF---SPNVITYSTLISGLCRELRGVSEALKLFGSVLKQG---YEPEVPTYNILIDGLL 194

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+  V++A EL   +    + P+ ITY   I G C     ++A  +  +M + G  PDVV
Sbjct: 195 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVV 254

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           + NA+IN  CK+ ++D+   LL  M  +G +P+ +++N+L+ G C  G+  +A   F  M
Sbjct: 255 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 314

Query: 356 VSKGCRHDVYSYNILINANCK---DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
           + +G +  V +YNIL++  CK   + ++++A+ L+  M+ +   P V+TY+ L+ GL + 
Sbjct: 315 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 374

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G L DA +L+  M+    +P+ +T+ + I GLC    V EA+++F A+    C     TY
Sbjct: 375 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITY 434

Query: 473 NCLIN 477
             +I+
Sbjct: 435 GTIIS 439



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 215/384 (55%), Gaps = 10/384 (2%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+ +TYN+++ GLC  G +  A+ L  +M     +P+V+TYN+L+ GFC V +  EA  +
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           F   +  G  PDVVT+NA+IN  CK  K+D+  R+L+ M+   + PD VTYNSL++G C 
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKD-QKVEDAVCLYREMLSERIRPSVI 400
            GR+  AR L   +V KG   +V +Y+ LI+  C++ + V +A+ L+  +L +   P V 
Sbjct: 128 NGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYN L+ GL +   + +A +L   +  + + PD+ T+  +IDGLCK G V +A+ + + +
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
               C   + ++N +INGLCK  R+  A  L   ++ KG  P+ ++ +T+I   C+ G+ 
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV--VVLLHKMAAEKLVVSDLSLS 578
            KA     +M  +   P+ VT+  L+ G  +  ++ ++   + L     EK  V D+   
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 364

Query: 579 SKVVDLLSKDKKYRECLNQFRHLL 602
           S ++D L K  K    L+  R LL
Sbjct: 365 SALIDGLGKAGK----LDDARRLL 384



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/317 (36%), Positives = 184/317 (58%), Gaps = 4/317 (1%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+     PN ITYN+L+ G C      +A+ L+  M+  G  PDVVT+N +++  CK G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+  ++ +  ++RG  PD VTYN+L++GFC   ++  A+ +   MVS+    DV +YN 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL-FQVGNLGDALKLIDKMQLN 428
           L+N  CK+ +V++A  L   ++ +   P+VITY+TL+SGL  ++  + +ALKL   +   
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
              P+  T+   IDGL K   V EA ++F  +     E    TY   I+GLCK GR++ A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             +   +  KG +PDVV+ + +I+ LCKE ++D+A  LL  MEAK C P+ ++F TL+ G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 549 FVQNNKKSKVVVLLHKM 565
             +  K  K +    +M
Sbjct: 298 QCRAGKWKKAMTTFKEM 314



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 186/382 (48%), Gaps = 74/382 (19%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  FD  +K    P + ++  L+    K  + D    + +R+ S  L PD+   N L
Sbjct: 62  DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSL 121

Query: 123 INCLCKMG-----------------------ITSG----------AFVVLGRILRSCFTP 149
           +N LCK G                       + SG          A  + G +L+  + P
Sbjct: 122 VNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEP 181

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
              T+N LI+GL  E R+ EA  LF  L     +P+ +T+   I+GLC+      AL + 
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 241

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           ++M +E G  C PDVV++N++I+GLCK+  VD+A+ LL  M+ +  +PN I++N+LICG 
Sbjct: 242 KDM-DEKG--CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQ 298

Query: 270 CCVDDWKEAKCLFIEMMDNGVQP------------------------------------- 292
           C    WK+A   F EM+  GV+P                                     
Sbjct: 299 CRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV 358

Query: 293 -DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
            DVVT++A+I+   K GK+D   RLL  M  +G  P+  TYNSL+ G C + ++  A EL
Sbjct: 359 PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALEL 418

Query: 352 FVSMVSKGCRHDVYSYNILINA 373
           FV+MV KGC  D  +Y  +I+A
Sbjct: 419 FVAMVEKGCVPDTITYGTIISA 440



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 180/319 (56%), Gaps = 5/319 (1%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M  +G  P+ +T+NA+++  C  G+M     L E MI+ G +PD VTYN+L+ GFC VG 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A ++F   V +G   DV +YN LIN  CK  K+++A  + + M+SE + P V+TYN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN-GFVLEAVQVFQAIRNC 463
           L++GL + G + +A  LI     +   P+  T++T I GLC+    V EA+++F ++   
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFS---PNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             E  + TYN LI+GL K  R+  A +LF  L   G  PD +T +  I  LCK G+++ A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             +L DM+ K CVP  V+   ++ G  +  +  +  VLL  M A+    + +S ++ +  
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 584 LLSKDKKYRECLNQFRHLL 602
              +  K+++ +  F+ +L
Sbjct: 298 -QCRAGKWKKAMTTFKEML 315


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 260/487 (53%), Gaps = 3/487 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + ++TIL+  L K+ +      + + +   G  P++   N LIN  CK+G    A V
Sbjct: 233 APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVV 292

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  ++L +  +P+  T+N LI+G C + R  + A+L +++  + C+PN +T+NTL++ L 
Sbjct: 293 LFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLV 352

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           ++   + A  L + M+      CKP   T+N +ID  CK G +D A EL   M DR   P
Sbjct: 353 KSGKYIDAFNLAQMMLRR---DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 409

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           ++ TYN +I G C  +   +A+ L   M + G  PDVVT+N++++  CK  ++D+   + 
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E++   G   D VT ++L+DG C   R+  A +L   M   G   DV +Y ILI+  CK 
Sbjct: 470 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 529

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +++ ++  + EML +   P+VITY+ ++  L +   + D   L+  M    V PD+  +
Sbjct: 530 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVY 589

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            + IDGLCK+    EA ++++ ++   C   + TYN L++ LCK+ RL  A  L   ++ 
Sbjct: 590 TSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMES 649

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G +PD VT +++     K  + DKA  L   M+++ C P+   +  LL   V   K  +
Sbjct: 650 DGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQ 709

Query: 558 VVVLLHK 564
            + +  +
Sbjct: 710 AMEIWEE 716



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 161/524 (30%), Positives = 261/524 (49%), Gaps = 5/524 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP   +++ L+    K + +     L   +   G+ P   V N +I  LC  G    A V
Sbjct: 164 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 223

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
               + R+C  P+ +T+  L++ LC   RI +A+ + + +    C PNVVT+NTLING C
Sbjct: 224 HYRDMQRNC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  N   A+ LF +M+      C PDV TYN +IDG CK        +LL +M      P
Sbjct: 283 KLGNMDEAVVLFNQMLEN---SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEP 339

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N ITYN+L+        + +A  L   M+    +P   TFN MI+  CK G++D    L 
Sbjct: 340 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF 399

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           +LM  RG  PD  TYN ++ G C   RI  AR+L   M   GC  DV +YN +++  CK 
Sbjct: 400 QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 459

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +V++A  +Y  + +      V+T +TL+ GL +   L DA KL+ +M+ N   PD   +
Sbjct: 460 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 519

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I G CK   + +++  F  + +  C   + TY+ +I+ LCK  R++  C L   +  
Sbjct: 520 TILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE 579

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +G  PD +  +++I  LCK    D+A +L   M+   C P+ VT+  L+    + ++  +
Sbjct: 580 RGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDE 639

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            + LL  M ++  +   ++ +S V D   K  ++ +    F+ +
Sbjct: 640 AIHLLEVMESDGCLPDTVTYNS-VFDGFWKSAEHDKAFRLFQAM 682



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 161/527 (30%), Positives = 264/527 (50%), Gaps = 4/527 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A    D M K    P    +  ++  L  N + D+ +  ++ +  N   P +    +L
Sbjct: 184 QQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVITYTIL 242

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LCK    S A ++L  ++ +   PN VT+N LING C  G + EA  LF ++   +C
Sbjct: 243 VDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSC 302

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V T+N LI+G C+        KL +EMV ++G  C+P+ +TYN+++D L K G    
Sbjct: 303 SPDVFTYNILIDGYCKQERPQDGAKLLQEMV-KYG--CEPNFITYNTLMDSLVKSGKYID 359

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L   M  R+  P+  T+N +I  FC V     A  LF  M D G  PD+ T+N MI+
Sbjct: 360 AFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMIS 419

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+  ++D   +LLE M + G  PD VTYNS++ G C   ++  A E++  + + G   
Sbjct: 420 GACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFL 479

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV + + LI+  CK ++++DA  L REM      P V+ Y  L+ G  +   L  +L   
Sbjct: 480 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFF 539

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M     VP   T++  ID LCK+  V +   + + +           Y  +I+GLCK 
Sbjct: 540 SEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKS 599

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
                A +L+  ++  G  P VVT + ++  LCK  ++D+A  LL  ME+  C+P  VT+
Sbjct: 600 DSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTY 659

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
            ++  GF ++ +  K   L   M +     +    S  +  L++++K
Sbjct: 660 NSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEK 706



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 226/444 (50%), Gaps = 5/444 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+  +EAV  F+ M++   SP + ++ IL+    K ++      L + +   G  P+
Sbjct: 283 KLGNM--DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 340

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N L++ L K G    AF +   +LR    P+  TFN +I+  C  G++  A  LF+
Sbjct: 341 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 400

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +    C P++ T+N +I+G CR      A +L E M     A C PDVVTYNSI+ GLC
Sbjct: 401 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE---AGCPPDVVTYNSIVSGLC 457

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   VD+A E+   +++     +V+T ++LI G C      +A+ L  EM  NG  PDVV
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            +  +I+  CK  ++DK       M+ +G  P  +TY+ ++D  C   R+     L  +M
Sbjct: 518 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 577

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           + +G   D   Y  +I+  CK    ++A  LY+ M      P+V+TYN L+  L +V  L
Sbjct: 578 LERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRL 637

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A+ L++ M+ +  +PD+ T+ +  DG  K+    +A ++FQA+++  C      Y+ L
Sbjct: 638 DEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLL 697

Query: 476 INGLCKMGRLKTACKLFHRLQHKG 499
           +  L    ++  A +++      G
Sbjct: 698 LTKLVAEEKMDQAMEIWEEALEAG 721



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 3/301 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A    + M +    P + ++  +++ L K  Q D    +++ L + G F D+   + L
Sbjct: 428 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTL 487

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK      A  +L  + R+   P+ V +  LI+G C   ++ ++   F ++    C
Sbjct: 488 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 547

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P V+T++ +I+ LC++        L + M+ E G    PD + Y S+IDGLCK    D+
Sbjct: 548 VPTVITYSIVIDKLCKSARVRDGCMLLKTML-ERGVT--PDAIVYTSVIDGLCKSDSYDE 604

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL   MK     P V+TYN L+   C V    EA  L   M  +G  PD VT+N++ +
Sbjct: 605 AYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFD 664

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K  + DK  RL + M  RG +P    Y+ L+       ++ +A E++   +  G   
Sbjct: 665 GFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADV 724

Query: 363 D 363
           D
Sbjct: 725 D 725


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 154/463 (33%), Positives = 254/463 (54%), Gaps = 19/463 (4%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D++  N+LI C C       A    G++ +  F P  VTFN L++GLC E R+ EA  LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            ++    C PNVVTF TL+NGLCR    + A+ L + MV +     +P+ +TY +I+DG+
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDG---LQPNQITYGTIVDGM 126

Query: 235 CKDGFVDKAKELLLQMKD-RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           CK G    A  LL +M++  +I P+V+ Y+++I G        +A+ LFIEM D G+ PD
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           +VT++ MIN  C  GK  +  RLL+ M+ R ++PD VT++ L++     G ++ A++L  
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-----------IRPSVITY 402
            M+S G   +V + N L++  C   K++DA+ +++ M               + P V TY
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N L+SGL   G   +A +L ++M    +VPD+ T+++ I+GLCK   + EA Q+F ++ +
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 I T+N LI G CK G +    +LF  +  +G + + +T  T+I    K G ++ 
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           + D+  +M +    P  +T   +L G     +  K + +L ++
Sbjct: 427 SLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 158/460 (34%), Positives = 245/460 (53%), Gaps = 17/460 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           SF IL+       +    +S F +L   G  P L   N L++ LC     S A  +  ++
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
            +    PN VTF  L+NGLC EGR++EA  L  ++      PN +T+ T+++G+C+  +T
Sbjct: 77  CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           + AL L  +M  E   I KPDVV Y++IIDGL KDG    A+ L ++M+D+ I P+++TY
Sbjct: 133 VSALNLLRKM-EELSHI-KPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + +I GFC    W EA+ L  EM+   + PDVVTF+ +IN   K+G ++    LL+ MI 
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-----------GCRHDVYSYNILI 371
            GV P+ VT N+L+DG C  G++  A E+F +M              G   DV +YNILI
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +    + K  +A  LY EM    I P  +TY+++++GL +   L +A ++ D M      
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  TF T I G CK G V + +++F  +          TY  LI G  K+G +  +  +
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           F  +   G  PD +T   M+  L  + ++ KA  +L +++
Sbjct: 431 FQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/449 (33%), Positives = 244/449 (54%), Gaps = 19/449 (4%)

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           +FN LI   C+  ++  A   F KL      P +VTFNTL++GLC       AL LF +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                  CKP+VVT+ ++++GLC++G V +A  LL +M +  + PN ITY +++ G C +
Sbjct: 77  -------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 273 DDWKEAKCLFIEMMD-NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
            D   A  L  +M + + ++PDVV ++A+I+   KDG+      L   M  +G+ PD VT
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y+ +++GFC  G+ S A+ L   M+ +    DV +++ LINA  K+  +  A  L +EM+
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ-----------LNDVVPDSFTFATY 440
           S  + P+V+T NTLL GL   G L DAL++   MQ            N V PD  T+   
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I GL   G  LEA ++++ + +        TY+ +INGLCK  RL  A ++F  +  K  
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P++VT +T+I   CK G +D   +L  +M  +  V + +T+ TL+RGF +    +  + 
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           +  +M +  +    +++ + +  L SK++
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEE 458



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/411 (32%), Positives = 223/411 (54%), Gaps = 19/411 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F  M K    P + +FT L+  L +  +    V+L  R+  +GL P+      +
Sbjct: 67  SEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 122

Query: 123 INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++ +CKMG T  A  +L ++   S   P+ V ++ +I+GL  +GR  +A  LF ++    
Sbjct: 123 VDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P++VT++ +ING C +     A +L +EM+        PDVVT++ +I+ L K+G ++
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR---KISPDVVTFSGLINALVKEGDLN 239

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA----KCLFIEMMD-------NGV 290
            A++LL +M    + PNV+T N+L+ G C     K+A    K +   MMD       NGV
Sbjct: 240 SAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGV 299

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
           +PDV T+N +I+    +GK  +   L E M  RG+ PDTVTY+S+++G C   R+  A +
Sbjct: 300 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ 359

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +F SM SK    ++ ++N LI   CK   V+D + L+ EM    I  + ITY TL+ G  
Sbjct: 360 MFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFR 419

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +VGN+  +L +  +M  + V PD+ T    + GL     + +A+ + + ++
Sbjct: 420 KVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 220/404 (54%), Gaps = 19/404 (4%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           ++ +FN LI   C       AL  F ++  + G    P +VT+N+++ GLC +  V +A 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLT-KLGF--HPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  QM      PNV+T+ +L+ G C      EA  L   M+++G+QP+ +T+  +++  
Sbjct: 71  DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 305 CKDGKMDKVNRLLELMIQ-RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           CK G       LL  M +   + PD V Y++++DG    GR + A+ LF+ M  KG   D
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +Y+ +IN  C   K  +A  L +EML  +I P V+T++ L++ L + G+L  A  L+ 
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC-----------KCELRIETY 472
           +M  + V P+  T  T +DGLC +G + +A+++F+A++               E  ++TY
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI+GL   G+   A +L+  + H+G +PD VT S+MI+ LCK+ ++D+A  +   M +
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           K+  P+ VTF TL+ G+ +       + L  +M    +V + ++
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 4/166 (2%)

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D ++F   I   C    +  A+  F  +        + T+N L++GLC   R+  A  LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           H++      P+VVT +T+++ LC+EG++ +A  LL  M      P+++T+ T++ G  + 
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
                 + LL KM     +  D+ + S ++D L KD ++ +  N F
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLF 175



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 54/117 (46%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M     SP + +F  L+T   K    D  + LF  +   G+  +      L
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           I    K+G  +G+  +   ++ S   P+T+T   ++ GL ++  + +A  + ++L +
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQM 471


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 163/498 (32%), Positives = 254/498 (51%), Gaps = 7/498 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    ++   K+G +  N+A   F  ++    +P   ++T L+  L     +D    
Sbjct: 9   DSWSYGILIDGLAKAGKL--NDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF  +N  G  P     N++I+  CK G+   A  ++ +++     P+ VT+N +++GLC
Sbjct: 67  LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
              R+ EA  LF ++    C PN  + NT+I GLC+      A ++F EM  E   I  P
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM--EAKDI-PP 183

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D  +Y  +IDGL K G +++A +L  +M D  I P+ +TYN +I G C      EA  LF
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M   G +P   TFN +I+ +CK GK+D+  RLL+ M   G  PD VTY++L+ G C +
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            R+  AR L   MV + C+  V + N LI+  CK  ++++A  +   M+S    P V+TY
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           NTL+ G  + G    A +L+  M    + P+  T+   + GLCK   + EA  VF  +++
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
             C   + TY  LI G C  G++    KLF  +   G  PD V   T+   LCK G+  +
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483

Query: 523 ANDLLLDMEAKNCVPSEV 540
           A ++L   E +  + SE 
Sbjct: 484 ALEIL--REGRESLRSEA 499



 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 160/498 (32%), Positives = 263/498 (52%), Gaps = 5/498 (1%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           +N   + PD +   +LI+ L K G  + A  +  ++L S  TP+TV +  LI+GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
             +A  LF  +N   C P+ VT+N +I+  C+      A  L ++M+ E G +  PDVVT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI-EDGHV--PDVVT 117

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN+++DGLCK   V++A  L  +M+     PN  ++N++I G C      +A  +F EM 
Sbjct: 118 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
              + PD  ++  +I+   K GK+++  +L + M+  G+ P  VTYN ++ G CL   + 
Sbjct: 178 AKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A ELF SM SKGCR   +++NILI+A+CK  K+++A  L + M  +   P V+TY+TL+
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           SGL  +  + DA  L++ M      P   T  T I GLCK G + EA +V  A+ +    
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + TYN L++G C+ G+ + A +L   +  +G  P+VVT + ++  LCK  ++ +A  +
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 417

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
              M++  C P+  T+  L+ GF    +    + L  +M    +    +   +   +L  
Sbjct: 418 FAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCK 477

Query: 587 KDKKYR--ECLNQFRHLL 602
             +  R  E L + R  L
Sbjct: 478 SGRSARALEILREGRESL 495



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 244/473 (51%), Gaps = 11/473 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA      MI+    P + ++  ++  L K+ + +  + LF  +   G  P+    N +
Sbjct: 97  EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTI 156

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  LC+      A  V   +      P++ ++  LI+GL   G++ EA +LF+++     
Sbjct: 157 ILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGI 216

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ VT+N +I+G+C       AL+LF+ M ++    C+P   T+N +ID  CK G +D+
Sbjct: 217 TPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG---CRPSRFTFNILIDAHCKRGKLDE 273

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL +M D    P+V+TY++LI G C +    +A+ L  +M+    +P VVT N +I+
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIH 333

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++ +   +L+ M+  G +PD VTYN+L+ G C  G+  RAREL   MV++G   
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP 393

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V +Y  L++  CK  ++ +A  ++ +M S    P++ TY  L+ G    G +   LKL 
Sbjct: 394 NVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLF 453

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET-----YNCLIN 477
            +M    + PD   + T    LCK+G    A+++   +R  +  LR E      Y   ++
Sbjct: 454 GEMVCAGISPDHVVYGTLAAELCKSGRSARALEI---LREGRESLRSEAWGDEVYRFAVD 510

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           GL + G+++ A      +   G +P    C++++  LCK GQ  +A  +L ++
Sbjct: 511 GLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 110/262 (41%), Gaps = 40/262 (15%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A +  + M+K +  P + +   L+  L K  +      +   + S+G  PD+   N L
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C+ G T  A  +L  ++     PN VT+  L++GLC   R+ EA  +F ++    C
Sbjct: 367 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+  LI G C        LKLF EMV    A   PD V Y ++   LCK G   +
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMVC---AGISPDHVVYGTLAAELCKSGRSAR 483

Query: 243 AKELLLQMKD--------------------------------RNIN-----PNVITYNSL 265
           A E+L + ++                                R++      P      SL
Sbjct: 484 ALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASL 543

Query: 266 ICGFCCVDDWKEAKCLFIEMMD 287
           + G C      EA+ +  E+MD
Sbjct: 544 VAGLCKSGQGGEARAVLEEIMD 565


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 148/483 (30%), Positives = 266/483 (55%), Gaps = 19/483 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L+    K  + D    L K ++S G+ P+L   N++IN LC+ G    A+ +
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 306

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +    FTP+ VT+N L+NG C EG   +A  +  ++      P+VVT+  LIN +C+
Sbjct: 307 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 366

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            RN   A++ F++M        +P+  TY ++IDG  + G +++A  +L +M +   +P+
Sbjct: 367 ARNLNRAMEFFDQMRIRG---LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPS 423

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+TYN+ I G C ++  +EA  +  EM++ G+ PDVV+++ +I+  C+ G++D+  ++ +
Sbjct: 424 VVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQ 483

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+++GV+PD VTY+SL+ G C + R++ A +L   M+  G   D ++Y  LINA C + 
Sbjct: 484 EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 543

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +  A+ L+ EM+ +   P  +TY+ L++GL +     +A +L+ K+   + VP   T+ 
Sbjct: 544 DLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYD 603

Query: 439 TYID---------------GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           T I+               G C  G + EA +VF+++     +     YN +I+G C+ G
Sbjct: 604 TLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGG 663

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            L  A  L+  + H G +P  VT  T+I  L KEG  ++ ++++ D   ++C  +E    
Sbjct: 664 NLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDT-LRSCRLNEAELA 722

Query: 544 TLL 546
            +L
Sbjct: 723 KVL 725



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/506 (31%), Positives = 269/506 (53%), Gaps = 24/506 (4%)

Query: 44  GTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL 103
           G+SI + L D +   N  S+ AV  FD M+K        S++ L          D  V+ 
Sbjct: 124 GSSIFQCLKDSYHVYN--SSSAV--FDLMVK--------SYSHL-------NMIDQAVNT 164

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKM--GITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
                S+G  P +   N +++ + +    +   A  V   ++RS  +PN  T+N LI G 
Sbjct: 165 INLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGF 224

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C+ G + +    F ++    C PNVVT+NTLI+  C+      A  L + M ++     +
Sbjct: 225 CSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG---MQ 281

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P++++YN II+GLC++G + +A E+L +M  +   P+ +TYN+L+ G+C   ++ +A  +
Sbjct: 282 PNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVI 341

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             EM+ NGV P VVT+ A+IN  CK   +++     + M  RG+ P+  TY +L+DGF  
Sbjct: 342 HAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSR 401

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G ++ A  +   M   G    V +YN  I+ +C  +++E+A+ + +EM+ + + P V++
Sbjct: 402 QGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVS 461

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+T++SG  + G L  A ++  +M    V PD+ T+++ I GLC+   + EA  + Q + 
Sbjct: 462 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML 521

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +        TY  LIN  C  G L  A  L   + HKG +PD VT S +I+ L K+ +  
Sbjct: 522 DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTR 581

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLR 547
           +A  LL  +  +  VPS+VT+ TL+ 
Sbjct: 582 EAKRLLFKLIYEESVPSDVTYDTLIE 607



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 161/517 (31%), Positives = 263/517 (50%), Gaps = 25/517 (4%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S E VY    MI+ + SP + ++ IL+       +    +  F  +  NG  P++   N 
Sbjct: 197 SAEEVY--REMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNT 254

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+  CKMG    AF +L  +      PN +++N +INGLC EG + EA  + +++    
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ VT+NTL+NG C+  N   AL +  EMV        P VVTY ++I+ +CK   ++
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG---VSPSVVTYTALINSMCKARNLN 371

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A E   QM+ R + PN  TY +LI GF       EA  +  EM ++G  P VVT+NA I
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 431

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           + +C   +M++   +++ M+++G+ PD V+Y++++ GFC  G + RA ++   MV KG  
Sbjct: 432 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +Y+ LI   C+ +++ +A  L +EML   + P   TY TL++     G+L  AL L
Sbjct: 492 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 551

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF----------------QAIRNCKC 465
            D+M     +PD+ T++  I+GL K     EA ++                   I NC  
Sbjct: 552 HDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS- 610

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
            +  ++   LI G C  G +  A ++F  +  +   P     + +IH  C+ G + KA +
Sbjct: 611 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 670

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQ---NNKKSKVV 559
           L  +M     VP  VT  TL++   +   N + S+V+
Sbjct: 671 LYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 707



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 233/461 (50%), Gaps = 5/461 (1%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC-AEGRI-MEAARLFK 175
           V +L++     + +   A   +     S F P  +++N +++ +  + G + + A  +++
Sbjct: 144 VFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR 203

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PNV T+N LI G C        L  F EM       C P+VVTYN++ID  C
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNG---CLPNVVTYNTLIDAYC 260

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G +D+A  LL  M  + + PN+I+YN +I G C     KEA  +  EM   G  PD V
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N ++N  CK+G   +   +   M++ GV+P  VTY +L++  C    ++RA E F  M
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +G R +  +Y  LI+   +   + +A  +  EM      PSV+TYN  + G   +  +
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +AL ++ +M    + PD  +++T I G C+ G +  A Q+ Q +          TY+ L
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 500

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I GLC+M RL  AC L   +   G  PD  T +T+I+  C EG ++KA  L  +M  K  
Sbjct: 501 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 560

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +P  VT+  L+ G  +  +  +   LL K+  E+ V SD++
Sbjct: 561 LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVT 601



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 195/386 (50%), Gaps = 20/386 (5%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    LN   K GN   ++A+     M++   SP + ++T L+  + K +  +  + 
Sbjct: 318 DEVTYNTLLNGYCKEGNF--HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAME 375

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            F ++   GL P+      LI+   + G+ + A+ +L  +  S F+P+ VT+N  I+G C
Sbjct: 376 FFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC 435

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
              R+ EA  + +++      P+VV+++T+I+G CR      A ++ +EMV +      P
Sbjct: 436 VLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG---VSP 492

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D VTY+S+I GLC+   + +A +L  +M D  + P+  TY +LI  +C   D  +A  L 
Sbjct: 493 DAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLH 552

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD----- 337
            EM+  G  PD VT++ +IN   K  +  +  RLL  +I     P  VTY++L++     
Sbjct: 553 DEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNI 612

Query: 338 ----------GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
                     GFC+ G +  A  +F SMV +  +     YN++I+ +C+   +  A  LY
Sbjct: 613 EFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLY 672

Query: 388 REMLSERIRPSVITYNTLLSGLFQVG 413
           +EM+     P  +T  TL+  LF+ G
Sbjct: 673 KEMIHSGFVPHTVTVITLIKALFKEG 698



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 184/365 (50%), Gaps = 3/365 (0%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE--AKCLFIEMMDNGVQPDVVTF 297
           +D+A   +   K     P V++YNS++          +  A+ ++ EM+ + V P+V T+
Sbjct: 158 IDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTY 217

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +I   C  G++ K       M + G  P+ VTYN+L+D +C +GRI  A  L  SM S
Sbjct: 218 NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           KG + ++ SYN++IN  C++  +++A  +  EM  +   P  +TYNTLL+G  + GN   
Sbjct: 278 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 337

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           AL +  +M  N V P   T+   I+ +CK   +  A++ F  +R         TY  LI+
Sbjct: 338 ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLID 397

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G  + G L  A ++ + +   G  P VVT +  IH  C   +M++A  ++ +M  K   P
Sbjct: 398 GFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP 457

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
             V++ T++ GF +  +  +   +  +M  EK V  D    S ++  L + ++  E  + 
Sbjct: 458 DVVSYSTIISGFCRKGELDRAFQMKQEM-VEKGVSPDAVTYSSLIQGLCEMRRLTEACDL 516

Query: 598 FRHLL 602
            + +L
Sbjct: 517 SQEML 521


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 158/516 (30%), Positives = 266/516 (51%), Gaps = 5/516 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++T ++   +   ++     +FK +   GL PD+   N L++ LCK   +  A  +
Sbjct: 340 PDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEI 399

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              I      P+ ++++ L++G   EGR ++   LF  +       +   FN LIN   +
Sbjct: 400 FHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAK 459

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 AL +F EM    G    P+VVTY ++I  LC+ G +  A E L QM    + PN
Sbjct: 460 RGMMDEALLIFTEMR---GQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPN 516

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGV-QPDVVTFNAMINYNCKDGKMDKVNRLL 317
            + Y+SLI GFC   D  +AK L  EMMD G+ +P++  F+++I+  C +G++     + 
Sbjct: 517 TVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVF 576

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
            L+I  G  PD  T+NSL+DG+CLVG++ +A  +  +MVS G   DV +Y+ LIN   K 
Sbjct: 577 NLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKS 636

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +++D + L+REML +R++P+ +TY+ +L GLF+ G    A K+  +M  +       T+
Sbjct: 637 GRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTY 696

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              + GLC+N    EA+ +F  +     +  I   N +I+ L K+ R + A  LF  +  
Sbjct: 697 TIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSA 756

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G +P+  T   MI  L KEG +++A+ +   ME   C PS      ++R  +Q  +  K
Sbjct: 757 SGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVK 816

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
               + K+    ++  + S +S ++ L +   +YRE
Sbjct: 817 AGYYMSKVDG-TIISLEASTTSLLISLFASKGRYRE 851



 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 163/546 (29%), Positives = 289/546 (52%), Gaps = 12/546 (2%)

Query: 65  AVYFFDCMIKMKPSPGMTSFT-----ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
           AV  F+ + + +  P +   T     IL+    + ++ D   + F RL   GL  D  V 
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT 203

Query: 120 NLLINCLCKMGITSGAF-VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           N  + CLC    T  A  ++L R+      P+  ++N +I  LC   R  EA  +  ++ 
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 179 VF-ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
               C P+VV++  +I+GL        A  LF EMV + G +  P+VVTYNSI+  LCK 
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQK-GVV--PNVVTYNSIVHALCKA 320

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             +DKA+ +L QM D +I P+ +TY ++I G+ C+  WKEA  +F EM   G+ PD+VTF
Sbjct: 321 RAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTF 380

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N++++  CK  +  +   +   +  +G  PD ++Y+ L+ G+   GR      LF SM  
Sbjct: 381 NSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTD 440

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            G   D + +NILINA+ K   +++A+ ++ EM  + + P+V+TY T+++ L ++G L D
Sbjct: 441 NGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLAD 500

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ-VFQAIRNCKCELRIETYNCLI 476
           A++ + +M    + P++  + + I G C +G +++A + V + +        I  ++ +I
Sbjct: 501 AMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSII 560

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           + LC  GR+  A  +F+ + H G  PD+ T +++I   C  G+MDKA  +L  M +    
Sbjct: 561 HSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTE 620

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           P  VT+ TL+ G+ ++ +    ++L  +M  +++  + ++  S V+D L +  +      
Sbjct: 621 PDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTY-SLVLDGLFRAGRTSAAKK 679

Query: 597 QFRHLL 602
            F  ++
Sbjct: 680 MFHEMI 685



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 230/461 (49%), Gaps = 8/461 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S EA   F  +      P + S++ILL   A   ++  + +LF  +  NG+  D    N+
Sbjct: 393 SKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNI 452

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LIN   K G+   A ++   +     +PN VT+  +I  LC  GR+ +A     ++    
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN V +++LI G C   + + A +L  EM+++   I +P++  ++SII  LC +G V 
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQ--GIPRPNITFFSSIIHSLCNEGRVM 570

Query: 242 KAKE---LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            A++   L++ + DR   P++ T+NSLI G+C V    +A  +   M+  G +PDVVT++
Sbjct: 571 NAQDVFNLVIHIGDR---PDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYS 627

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +IN   K G++D    L   M+ + V P TVTY+ ++DG    GR S A+++F  M+  
Sbjct: 628 TLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIES 687

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G    + +Y I++   C++   ++A+ L+ ++ +  ++  +   NT++  L++V    +A
Sbjct: 688 GTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEA 747

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L   +  + +VP++ T+   I  L K G V EA  +F ++    C       N +I  
Sbjct: 748 HDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRM 807

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           L + G +  A     ++       +  T S +I     +G+
Sbjct: 808 LLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGR 848



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 175/412 (42%), Gaps = 39/412 (9%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F IL+   AK    D  + +F  +   G+ P++     +I  LC+MG  + A   L +++
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 144 RSCFTPNTVTFNFLING------------------------------------LCAEGRI 167
                PNTV ++ LI G                                    LC EGR+
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
           M A  +F  +      P++ TFN+LI+G C       A  + + MV+   A  +PDVVTY
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVS---AGTEPDVVTY 626

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           +++I+G  K G +D    L  +M  + + P  +TY+ ++ G         AK +F EM++
Sbjct: 627 STLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIE 686

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           +G    + T+  ++   C++   D+   L   +    +  +    N+++     V R   
Sbjct: 687 SGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREE 746

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A +LF S+ + G   +  +Y ++I    K+  VE+A  ++  M      PS    N ++ 
Sbjct: 747 AHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIR 806

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            L Q G +  A   + K+    +  ++ T +  I      G   E ++   A
Sbjct: 807 MLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFLPA 858


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 152/442 (34%), Positives = 252/442 (57%), Gaps = 14/442 (3%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
            N VTF  L+NGLC EGR+++A  L  ++      P+ VT+ T++NG+C+  +T+ AL +
Sbjct: 8   ANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNM 67

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M     +  K +VV Y++I+D LCKDG   KA+ +  +M ++ I PNV+TYN +I G
Sbjct: 68  LRKMDE---SQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDG 124

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           +C    W +A+ L  +M++  + PDVVTF+A+IN   K+GK+     L   M++R + P 
Sbjct: 125 YCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPT 184

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK--------- 379
           T+TY+S++DGFC   R+  A+ +F  MVSKGC  D+ + N LI+  C+ ++         
Sbjct: 185 TITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQV 244

Query: 380 --VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             V  A  L++EM+S  + P ++T NTLL+GL + G L  AL++    Q + +  D+ T 
Sbjct: 245 GNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATC 304

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I+G+CK   V EA  +F ++     E  + TYN LI    K G    A  ++  +  
Sbjct: 305 NIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLC 364

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           KG IP  VT ++M+   CK+ ++++A  ++  M ++ C P  VTF TL++G+ +  +   
Sbjct: 365 KGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDD 424

Query: 558 VVVLLHKMAAEKLVVSDLSLSS 579
            + L  +M    LV   ++ ++
Sbjct: 425 GLELFSEMCQRGLVADTITYNA 446



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 259/505 (51%), Gaps = 14/505 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++      + +FT L+  L +  +    ++L  R+   G  PD      ++N +CK+G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T  A  +L ++  S    N V ++ +++ LC +G  ++A  +F +++     PNV+T+N 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I+G C       A +L  +M+        PDVVT++++I+   K+G V  A+EL  +M 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERN---IDPDVVTFSALINAFVKEGKVSGAEELYREML 177

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD---- 307
            RNI P  ITY+S+I GFC     ++AK +F  M+  G  PD++T N +I+  C+     
Sbjct: 178 RRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237

Query: 308 -------GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
                  G ++    L + MI  GV+PD VT N+L+ G C  G++ +A E+F        
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D  + NI+IN  CK  KV++A  L+  +    +   V+TYN L+    + GN   A  
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAED 357

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           +  +M    ++P + T+ + +DG CK   + EA Q+  ++ +  C   + T++ LI G C
Sbjct: 358 IYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYC 417

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K GR+    +LF  +  +G + D +T + +IH  CK G ++ A D+  +M +    P  +
Sbjct: 418 KAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTI 477

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
           TF ++L G     +  K + +L  +
Sbjct: 478 TFRSMLAGLCTKAELQKGLTMLEDL 502



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 257/483 (53%), Gaps = 22/483 (4%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M++    P   ++  ++  + K     + +++ ++++ + +  ++ + + ++
Sbjct: 28  QALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIV 87

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G    A  +   +      PN +T+N +I+G C+ G+  +A +L + +     D
Sbjct: 88  DRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNID 147

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMV--NEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           P+VVTF+ LIN   +      A +L+ EM+  N F     P  +TY+S+IDG CK   ++
Sbjct: 148 PDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF-----PTTITYSSMIDGFCKHSRLE 202

Query: 242 KAKELLLQMKDRNINPNVITYNSLI-----------CGFCCVDDWKEAKCLFIEMMDNGV 290
            AK +   M  +  +P++IT N+LI            GFC V +   A+ LF EM+ NGV
Sbjct: 203 DAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGV 262

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PD+VT N ++   C++GK++K   + ++  +  ++ DT T N +++G C   ++  A +
Sbjct: 263 SPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWD 322

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF S+   G   DV +YNILI    K+     A  +Y EML + I PS +TYN+++ G  
Sbjct: 323 LFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFC 382

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           +   L +A +++D M      PD  TF+T I G CK G V + +++F  +  C+  L  +
Sbjct: 383 KQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEM--CQRGLVAD 440

Query: 471 T--YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           T  YN LI+G CK+G L  A  +F  +   G  PD +T  +M+  LC + ++ K   +L 
Sbjct: 441 TITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLE 500

Query: 529 DME 531
           D++
Sbjct: 501 DLQ 503



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 205/395 (51%), Gaps = 46/395 (11%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C  +VVT+ ++++GLC++G V +A  L+ +M +    P+ +TY +++ G C + D   A 
Sbjct: 6   CPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSAL 65

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            +  +M ++ ++ +VV ++A+++  CKDG   K   +   M ++G+ P+ +TYN ++DG+
Sbjct: 66  NMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGY 125

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  G+ S A +L   M+ +    DV +++ LINA  K+ KV  A  LYREML   I P+ 
Sbjct: 126 CSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTT 185

Query: 400 ITYNT----------------------------------------------LLSGLFQVG 413
           ITY++                                              L+ G  QVG
Sbjct: 186 ITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVG 245

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           N+  A  L  +M  N V PD  T  T + GLC+NG + +A+++F+  +  K +L   T N
Sbjct: 246 NVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCN 305

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +ING+CK  ++  A  LF+ L   G   DVVT + +I    KEG   +A D+ L+M  K
Sbjct: 306 IIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCK 365

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
             +PS VT+ +++ GF + N+  +   ++  M +E
Sbjct: 366 GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSE 400



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 136/261 (52%), Gaps = 5/261 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN+  N A   F  MI    SP + +   LL  L +N + +  + +FK    + +  D  
Sbjct: 245 GNV--NVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N++IN +CK      A+ +   +  +    + VT+N LI     EG  + A  ++ ++
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P+ VT+N++++G C+      A ++ + MV+E    C PDVVT++++I G CK 
Sbjct: 363 LCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEG---CSPDVVTFSTLIKGYCKA 419

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G VD   EL  +M  R +  + ITYN+LI GFC V D   A+ +F EM+ +GV PD +TF
Sbjct: 420 GRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITF 479

Query: 298 NAMINYNCKDGKMDKVNRLLE 318
            +M+   C   ++ K   +LE
Sbjct: 480 RSMLAGLCTKAELQKGLTMLE 500


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 168/539 (31%), Positives = 277/539 (51%), Gaps = 7/539 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  F   M+  +  P   ++  L+   +   Q+   V +FK +  + + PD+  L++L
Sbjct: 274 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 333

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LCK G    A  V   +      P+  ++N ++NG   +G +++   LF  +     
Sbjct: 334 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 393

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  TFN LI           A+ +F EM +      KPDVVTY ++I  LC+ G +D 
Sbjct: 394 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG---VKPDVVTYRTVIAALCRIGKMDD 450

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E   QM D+ + P+   YN LI GFC      +AK L  E+M+NG+  D+V F+++IN
Sbjct: 451 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 510

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++     + +L +  G++PD V YN LMDG+CLVG++ +A  +F +MVS G   
Sbjct: 511 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 570

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V  Y  L+N  CK  ++++ + L+REML   I+PS I Y+ ++ GLF+ G    A    
Sbjct: 571 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKF 630

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M  + +  D  T+   + GL KN    EA+ +F+ +R    ++ I T N +I+G+ + 
Sbjct: 631 HEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQT 690

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            R++ A  LF  +     +P VVT S MI  L KEG +++A D+   M+   C P+    
Sbjct: 691 RRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLL 750

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             ++R  ++ N+  +    L K+      +  L+ +  +VDL S     RE   Q R L
Sbjct: 751 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT-AMLLVDLFSSKGTCRE---QIRFL 805



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/511 (29%), Positives = 269/511 (52%), Gaps = 7/511 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           SP   ++ IL+    +  + +  ++ F +L   GL  ++ + N L+   C+   T  A  
Sbjct: 111 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 170

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           ++L R       P+  +++ L+  LC +G+  +A  L + +      C PNVV +NT+I+
Sbjct: 171 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 230

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A  LF+EMV        PD+VTYNS++  LCK   +DKA+  L QM ++ 
Sbjct: 231 GFFKEGDVNKACDLFKEMVQRG---IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TYN+LI G+     WKEA  +F EM  + + PDVVT + ++   CK GK+ +  
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 347

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + M  +G NPD  +YN +++G+   G +    +LF  M+  G   D Y++N+LI A 
Sbjct: 348 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 407

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
                ++ A+ ++ EM    ++P V+TY T+++ L ++G + DA++  ++M    V PD 
Sbjct: 408 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 467

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           + +   I G C +G +L+A ++   I N    L I  ++ +IN LCK+GR+  A  +F  
Sbjct: 468 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 527

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             + G  PD V  + ++   C  G+M+KA  +   M +    P+ V + TL+ G+ +  +
Sbjct: 528 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 587

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
             + + L  +M    +  S + L S ++D L
Sbjct: 588 IDEGLSLFREMLQRGIKPSTI-LYSIIIDGL 617



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 185/397 (46%), Gaps = 3/397 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F+ M      P + ++  ++  L +  + D  +  F ++   G+ PD +  N L
Sbjct: 414 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 473

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C  G    A  ++  I+ +    + V F+ +IN LC  GR+M+A  +F        
Sbjct: 474 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 533

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ V +N L++G C       AL++F+ MV+   A  +P+VV Y ++++G CK G +D+
Sbjct: 534 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS---AGIEPNVVGYGTLVNGYCKIGRIDE 590

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              L  +M  R I P+ I Y+ +I G         AK  F EM ++G+  D+ T+N ++ 
Sbjct: 591 GLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLR 650

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+   D+   L + +    V  + +T N+++DG     R+  A++LF S+       
Sbjct: 651 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVP 710

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V +Y+I+I    K+  VE+A  ++  M +    P+    N ++  L +   +  A   +
Sbjct: 711 SVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYL 770

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            K+   +   +  T    +D     G   E ++   A
Sbjct: 771 SKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPA 807


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 172/576 (29%), Positives = 289/576 (50%), Gaps = 41/576 (7%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G+  S++A   +  M+  + SP + +++ ++  L K +  D  + 
Sbjct: 195 DVVSYTTVINGFFKEGD--SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAME 252

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ P+    N +++  C       A   L ++      P+ VT+N L++ LC
Sbjct: 253 VLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLC 312

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
             GR  EA ++F  +     +P++ T+ TL+ G   T+  LV +    +++   G     
Sbjct: 313 KNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA-TKGALVEMHALLDLMVRNGIHPDH 371

Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                 IC                        P+VVTY ++I  LCK G VD A     Q
Sbjct: 372 HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  + PN+I Y SLI   C  D W +A+ L +EM+D G+  + + FN++I+ +CK+G+
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGR 491

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L +LM++ GV P+ +TY++L+DG+CL G++  A +L  SM S G + D  +YN 
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  C+  +++DA+ L++EM+S  + P++ITYN +L GLF       A +L   +  + 
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
              +  T+   + GLCKN    EA+++FQ +     +L   T+N +I  L K+GR   A 
Sbjct: 612 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 671

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            LF  L   G +PDV T S M   L ++G +++ +DL L ME   C  +     +++R  
Sbjct: 672 DLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 731

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           +Q    ++    L  M  EK      SL +    LL
Sbjct: 732 LQRGDITRAGTYL-SMIDEK----HFSLEASTASLL 762



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 266/544 (48%), Gaps = 40/544 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVL 119
            +A + F+ +++      +      L  +A++      VS + R+   G   + P +   
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKVTPTVHTY 90

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLN 178
            +LI C C+ G     F  LG +++  F    +TF  L+ GLCA+ R  +A  +  +++ 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
             +C P+V +   L+ GLC    +  AL+L   M ++ G    PDVV+Y ++I+G  K+G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
             DKA     +M DR I+P+V+TY+S+I   C      +A  +   M+ NGV P+ +T+N
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++++  C   +  +    L+ M   GV PD VTYNSLMD  C  GR + AR++F SM  +
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330

Query: 359 GCRHDVYSY-----------------------------------NILINANCKDQKVEDA 383
           G   D+ +Y                                   NILI A  K +KV++A
Sbjct: 331 GLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + ++ +M    + P+V+TY  ++  L + G++ DA+   ++M    + P+   + + I  
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC      +A ++   + +    L    +N +I+  CK GR+  + KLF  +   G  P+
Sbjct: 451 LCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPN 510

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           V+T ST+I   C  G+MD+A  LL  M +    P  VT+ TL+ G+ + ++    + L  
Sbjct: 511 VITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFK 570

Query: 564 KMAA 567
           +M +
Sbjct: 571 EMVS 574



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 254/538 (47%), Gaps = 41/538 (7%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL---NSNGLFPDLFVLNLLINCLCK 128
           M ++   P + S TILL  L    +    + L   +      G  PD+     +IN   K
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFK 208

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G +  A+     +L    +P+ VT++ +I  LC    + +A  +   +      PN +T
Sbjct: 209 EGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N++++G C +     A+   ++M ++     +PDVVTYNS++D LCK+G   +A+++  
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDG---VEPDVVTYNSLMDYLCKNGRSTEARKIFD 325

Query: 249 QMKDRNINPNVITY-----------------------------------NSLICGFCCVD 273
            M  R + P++ TY                                   N LIC +   +
Sbjct: 326 SMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
              EA  +F +M  +G+ P+VVT+ A+I   CK G +D      E MI  G+ P+ + Y 
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 445

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           SL+   C+  +  +A EL + M+ +G   +   +N +I+++CK+ +V ++  L+  M+  
Sbjct: 446 SLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            ++P+VITY+TL+ G    G + +A KL+  M    + PD  T+ T I+G C+   + +A
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           + +F+ + +      I TYN ++ GL    R   A +L+  +   G   ++ T + ++H 
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           LCK    D+A  +  ++   +      TF  ++   ++  +  +   L   ++A  LV
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 683



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 1/102 (0%)

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + TY  LI   C+ GRL         +  KG   + +T + ++  LC + +   A D++L
Sbjct: 87  VHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVL 146

Query: 529 -DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
             M   +C+P   +   LL+G    N+  + + LLH MA ++
Sbjct: 147 RRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDR 188


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 153/463 (33%), Positives = 254/463 (54%), Gaps = 19/463 (4%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D++  N+LI C C       A    G++ +  F P  VTFN L++GLC E R+ EA  LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            ++    C PNVVTF TL+NGLCR    + A+ L + MV +     +P+ +TY +I+DG+
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDG---LQPNQITYGTIVDGM 126

Query: 235 CKDGFVDKAKELLLQMKD-RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           CK G    A  LL +M++  +I P+V+ Y+++I G        +A+ LFIEM D G+ PD
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           +VT++ MIN  C  GK  +  RLL+ M+ R ++PD VT++ L++     G ++ A++L  
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-----------IRPSVITY 402
            M+S G   +V + N L++  C   K++DA+ +++ M               + P V TY
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N L+SGL   G   +A +L ++M    +VPD+ T+++ I+GLCK   + EA Q+F ++ +
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 I T+N LI G CK G +    +LF  +  +G + + +T  T+I    K G ++ 
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           + D+  +M +    P  +T   +L G     +  + + +L ++
Sbjct: 427 SLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 157/460 (34%), Positives = 245/460 (53%), Gaps = 17/460 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           SF IL+       +    +S F +L   G  P L   N L++ LC     S A  +  ++
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
            +    PN VTF  L+NGLC EGR++EA  L  ++      PN +T+ T+++G+C+  +T
Sbjct: 77  CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           + AL L  +M  E   I KPDVV Y++IIDGL KDG    A+ L ++M+D+ I P+++TY
Sbjct: 133 VSALNLLRKM-EELSHI-KPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + +I GFC    W EA+ L  EM+   + PDVVTF+ +IN   K+G ++    LL+ MI 
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-----------GCRHDVYSYNILI 371
            GV P+ VT N+L+DG C  G++  A E+F +M              G   DV +YNILI
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +    + K  +A  LY EM    I P  +TY+++++GL +   L +A ++ D M      
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  TF T I G CK G V + +++F  +          TY  LI G  K+G +  +  +
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           F  +   G  PD +T   M+  L  + ++ +A  +L +++
Sbjct: 431 FQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/452 (33%), Positives = 245/452 (54%), Gaps = 19/452 (4%)

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           +FN LI   C+  ++  A   F KL      P +VTFNTL++GLC       AL LF +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                  CKP+VVT+ ++++GLC++G V +A  LL +M +  + PN ITY +++ G C +
Sbjct: 77  -------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 273 DDWKEAKCLFIEMMD-NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
            D   A  L  +M + + ++PDVV ++A+I+   KDG+      L   M  +G+ PD VT
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y+ +++GFC  G+ S A+ L   M+ +    DV +++ LINA  K+  +  A  L +EM+
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ-----------LNDVVPDSFTFATY 440
           S  + P+V+T NTLL GL   G L DAL++   MQ            N V PD  T+   
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I GL   G  LEA ++++ + +        TY+ +INGLCK  RL  A ++F  +  K  
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P++VT +T+I   CK G +D   +L  +M  +  V + +T+ TL+RGF +    +  + 
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           +  +M +  +    +++ + +  L SK++  R
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEELKR 461



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 133/411 (32%), Positives = 222/411 (54%), Gaps = 19/411 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F  M K    P + +FT L+  L +  +    V+L  R+  +GL P+      +
Sbjct: 67  SEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 122

Query: 123 INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++ +CKMG T  A  +L ++   S   P+ V ++ +I+GL  +GR  +A  LF ++    
Sbjct: 123 VDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P++VT++ +ING C +     A +L +EM+        PDVVT++ +I+ L K+G ++
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR---KISPDVVTFSGLINALVKEGDLN 239

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA----KCLFIEMMD-------NGV 290
            A++LL +M    + PNV+T N+L+ G C     K+A    K +   MMD       NGV
Sbjct: 240 SAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGV 299

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
           +PDV T+N +I+    +GK  +   L E M  RG+ PDTVTY+S+++G C   R+  A +
Sbjct: 300 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ 359

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +F SM SK    ++ ++N LI   CK   V+D + L+ EM    I  + ITY TL+ G  
Sbjct: 360 MFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFR 419

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +VGN+  +L +  +M  + V PD+ T    + GL     +  A+ + + ++
Sbjct: 420 KVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 220/404 (54%), Gaps = 19/404 (4%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           ++ +FN LI   C       AL  F ++  + G    P +VT+N+++ GLC +  V +A 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLT-KLGF--HPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  QM      PNV+T+ +L+ G C      EA  L   M+++G+QP+ +T+  +++  
Sbjct: 71  DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 305 CKDGKMDKVNRLLELMIQ-RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           CK G       LL  M +   + PD V Y++++DG    GR + A+ LF+ M  KG   D
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +Y+ +IN  C   K  +A  L +EML  +I P V+T++ L++ L + G+L  A  L+ 
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC-----------KCELRIETY 472
           +M  + V P+  T  T +DGLC +G + +A+++F+A++               E  ++TY
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI+GL   G+   A +L+  + H+G +PD VT S+MI+ LCK+ ++D+A  +   M +
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           K+  P+ VTF TL+ G+ +       + L  +M    +V + ++
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 4/166 (2%)

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D ++F   I   C    +  A+  F  +        + T+N L++GLC   R+  A  LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           H++      P+VVT +T+++ LC+EG++ +A  LL  M      P+++T+ T++ G  + 
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
                 + LL KM     +  D+ + S ++D L KD ++ +  N F
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLF 175



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 53/117 (45%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M     SP + +F  L+T   K    D  + LF  +   G+  +      L
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           I    K+G  +G+  +   ++ S   P+T+T   ++ GL ++  +  A  + ++L +
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQM 471


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 172/539 (31%), Positives = 273/539 (50%), Gaps = 7/539 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+   + M     SP  T+FT ++    +    D  + + +++   G       +N+LIN
Sbjct: 222 AILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLIN 281

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G    A   +   +   F P+  T+N L+NGLC  G    A  +   + +   DP
Sbjct: 282 GFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDP 341

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           ++ T+N+LI+GLC+      A+K+ ++MV+     C P+ VTYN+II  LCK+  VD+A 
Sbjct: 342 DIYTYNSLISGLCKLGEIEEAVKILDQMVSR---DCSPNAVTYNAIISSLCKENRVDEAT 398

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E+   +  + I P+V T+NSLI G C   + K A  LF EM   G +PD  T+N +I+  
Sbjct: 399 EIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C   K+++   LL+ M   G   + V YN+L+DGFC   RI  A E+F  M  +G   D 
Sbjct: 459 CSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDS 518

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN LI+  CK ++VEDA  L  +M+ E +RP   TYN+LL+   + G++  A  ++  
Sbjct: 519 VTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQT 578

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  +   PD  T+AT I GLCK G V  A ++ ++I+     L    YN +I  L K  R
Sbjct: 579 MTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNR 638

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK-EGQMDKANDLLLDMEAKNCVPSEVTFC 543
              A +LF  +  K   PD +T   +   LC   G + +A D  ++M  +  +P   +F 
Sbjct: 639 THEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFV 698

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            L  G    +    +V L+  M  EK   S+  +S+  +    K +K+++ L+    +L
Sbjct: 699 MLAEGLCTLSMDDTLVKLV-DMIMEKAKFSEREIST--IRGFLKIRKFQDALSTLGGIL 754



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 154/492 (31%), Positives = 259/492 (52%), Gaps = 13/492 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    + +LL +L    +   V S    +    +  D+   N+LI  LCK      A ++
Sbjct: 166 PDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILM 225

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  +     +P+  TF  ++ G    G +  A R+ +++  + C    VT N LING C+
Sbjct: 226 MEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCK 285

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 AL   +E V+E     +PD  TYN++++GLCK G    A E++  M    ++P+
Sbjct: 286 QGRIDQALSFIQEAVSEG---FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           + TYNSLI G C + + +EA  +  +M+     P+ VT+NA+I+  CK+ ++D+   +  
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           L+  +G+ PD  T+NSL+ G CL      A +LF  M  KGCR D ++YN+LI++ C  +
Sbjct: 403 LLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSR 462

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K+E+A+ L +EM       +V+ YNTL+ G  +   + +A ++ D+M+L  V  DS T+ 
Sbjct: 463 KLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN 522

Query: 439 TYIDGLCKNGFVLEAVQ-----VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           T IDGLCK+  V +A Q     + + +R  K      TYN L+   CK G +K A  +  
Sbjct: 523 TLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKF-----TYNSLLTHFCKTGDIKKAADIVQ 577

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +   G  PD+VT +T+I  LCK G++  A+ LL  ++ K  V +   +  +++   + N
Sbjct: 578 TMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRN 637

Query: 554 KKSKVVVLLHKM 565
           +  + + L  +M
Sbjct: 638 RTHEAMRLFREM 649



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 249/478 (52%), Gaps = 3/478 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++ +    +++F IL+  L K  Q    + + + + S GL PD      ++    + G 
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
             GA  +  +++        VT N LING C +GRI +A    ++       P+  T+NT
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+NGLC+  +   A+++ + M+   G +  PD+ TYNS+I GLCK G +++A ++L QM 
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAML--LGGL-DPDIYTYNSLISGLCKLGEIEEAVKILDQMV 370

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R+ +PN +TYN++I   C  +   EA  +   +   G+ PDV TFN++I   C      
Sbjct: 371 SRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHK 430

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               L E M  +G  PD  TYN L+D  C   ++  A  L   M   GC  +V  YN LI
Sbjct: 431 SAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLI 490

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CK++++E+A  ++ EM  + +    +TYNTL+ GL +   + DA +L+D+M +  + 
Sbjct: 491 DGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLR 550

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD FT+ + +   CK G + +A  + Q + +  C   I TY  LI+GLCK GR++ A +L
Sbjct: 551 PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRL 610

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
              +Q KG +      + +I  L K  +  +A  L  +M  K+  P  +T+  + RG 
Sbjct: 611 LRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGL 668



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 145/445 (32%), Positives = 225/445 (50%), Gaps = 6/445 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  ++A+ F    +     P   ++  L+  L K       + +   +   GL PD
Sbjct: 285 KQGRI--DQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N LI+ LCK+G    A  +L +++    +PN VT+N +I+ LC E R+ EA  + +
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            L      P+V TFN+LI GLC + N   A+ LFEEM    G  C+PD  TYN +ID LC
Sbjct: 403 LLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMK---GKGCRPDEFTYNMLIDSLC 459

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
               +++A  LL +M+      NV+ YN+LI GFC     +EA+ +F EM   GV  D V
Sbjct: 460 SSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSV 519

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I+  CK  +++   +L++ MI  G+ PD  TYNSL+  FC  G I +A ++  +M
Sbjct: 520 TYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTM 579

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            S GC  D+ +Y  LI+  CK  +V+ A  L R +  + +  +   YN ++  LF+    
Sbjct: 580 TSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRT 639

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL-EAVQVFQAIRNCKCELRIETYNC 474
            +A++L  +M      PD+ T+     GLC  G  + EAV     +          ++  
Sbjct: 640 HEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVM 699

Query: 475 LINGLCKMGRLKTACKLFHRLQHKG 499
           L  GLC +    T  KL   +  K 
Sbjct: 700 LAEGLCTLSMDDTLVKLVDMIMEKA 724



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 217/455 (47%), Gaps = 6/455 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P   T   LI  L  +   + A R+F   N  +  PN V  +++   + R      + + 
Sbjct: 59  PPDFTPKQLIETLRRQTDEVAALRVF---NWASKQPNFVPSSSVYEEILRKLGKAGSFEY 115

Query: 209 FEEMVNEFG-AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR-NINPNVITYNSLI 266
              ++ E   + C+ D   +   ++   K    D+   ++  M+D   I P+   YN L+
Sbjct: 116 MRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLL 175

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
                 +  K  +     M+   ++ DV TFN +I   CK  ++     ++E M   G++
Sbjct: 176 NVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLS 235

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD  T+ ++M G+   G +  A  +   MV  GC     + N+LIN  CK  +++ A+  
Sbjct: 236 PDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSF 295

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            +E +SE  RP   TYNTL++GL ++G+   A++++D M L  + PD +T+ + I GLCK
Sbjct: 296 IQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCK 355

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G + EAV++   + +  C     TYN +I+ LCK  R+  A ++   L  KG +PDV T
Sbjct: 356 LGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCT 415

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            +++I  LC       A DL  +M+ K C P E T+  L+     + K  + + LL +M 
Sbjct: 416 FNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEME 475

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                  ++ + + ++D   K+K+  E    F  +
Sbjct: 476 LNG-CARNVVIYNTLIDGFCKNKRIEEAEEIFDEM 509


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 165/504 (32%), Positives = 262/504 (51%), Gaps = 40/504 (7%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
            S   +  G+   + L +  +   +  +  ++F   M++ +P P +  F+ LL+ ++K K
Sbjct: 38  FSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFH--MVQCRPLPSIADFSRLLSAISKMK 95

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           +YD V+ L++++   G+  +L   N+L+NC C+    S A   LG               
Sbjct: 96  KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLG--------------- 140

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
                               K+     +P++VTF +L+NG CR      AL +F+ MV E
Sbjct: 141 --------------------KMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMV-E 179

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            G   +P+VV YN+IIDGLCK   VD A +LL +M+   I P+ +TYNSLI G C    W
Sbjct: 180 MGY--EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRW 237

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            +A  +   M    + PDV TFNA+I+   K+G++ +   L E MI+R ++PD VTY+ L
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           + G C+  R+  A ++F  MVSKGC  DV +Y+ILIN  CK +KVE  + L+ EM    +
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
             + +TY  L+ G  + G L  A ++   M    V P+  T+   + GLC NG + +A+ 
Sbjct: 358 VRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALV 417

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +   ++    +  I TYN +I G+CK G +  A  L+  L  KG  PD+ T + M+  L 
Sbjct: 418 ILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLY 477

Query: 516 KEGQMDKANDLLLDMEAKNCVPSE 539
           K+G   +A+ L   M+    +P+E
Sbjct: 478 KKGLRGEADALFRKMKEDGILPNE 501



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 219/423 (51%), Gaps = 3/423 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+   F+ L++ +    +      L++++ +     N+ T N L+N  CR     +AL  
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M+ + G   +PD+VT+ S+++G C+   +  A  +  +M +    PNV+ YN++I G
Sbjct: 139 LGKMM-KLGH--EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDG 195

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C       A  L   M  +G++PD VT+N++I+  C  G+ D   R++  M +R + PD
Sbjct: 196 LCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPD 255

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
             T+N+L+D     GRIS A EL+  M+ +    D+ +Y++LI   C   ++++A  ++ 
Sbjct: 256 VFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFG 315

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+S+   P V+TY+ L++G  +   +   +KL  +M    VV ++ T+   I G C+ G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAG 375

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            +  A ++F+ +  C     I TYN L++GLC  G+++ A  +   +Q  G   D+VT +
Sbjct: 376 KLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYN 435

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +I  +CK G++  A DL   +  K   P   T+  ++ G  +   + +   L  KM  +
Sbjct: 436 IIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKED 495

Query: 569 KLV 571
            ++
Sbjct: 496 GIL 498



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 164/315 (52%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D + +L   M      P++  ++ L+     +  +     L+ +M   G+  ++ T N 
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           ++N  C+  ++      L  M++ G  PD VT+ SL++GFC   RI  A  +F  MV  G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              +V  YN +I+  CK ++V++A+ L   M  + IRP  +TYN+L+SGL   G   DA 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +++  M   ++ PD FTF   ID   K G + EA ++++ +     +  I TY+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C   RL  A ++F  +  KG  PDVVT S +I+  CK  +++    L  +M  +  V + 
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 540 VTFCTLLRGFVQNNK 554
           VT+  L++G+ +  K
Sbjct: 362 VTYTVLIQGYCRAGK 376



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 152/291 (52%)

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF  M+     P +  F+ +++   K  K D V  L E M   G+  +  T N L++ FC
Sbjct: 68  LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
              ++S A      M+  G   D+ ++  L+N  C+  ++ DA+ ++  M+     P+V+
Sbjct: 128 RCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVV 187

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            YNT++ GL +   + +AL L+++M+++ + PD+ T+ + I GLC +G   +A ++   +
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCM 247

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
              +    + T+N LI+   K GR+  A +L+  +  +   PD+VT S +I+ LC   ++
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           D+A  +   M +K C P  VT+  L+ G+ ++ K    + L  +M+   +V
Sbjct: 308 DEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 108/227 (47%)

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           ++  + +LF  MV       +  ++ L++A  K +K +  + L+ +M    I  ++ T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            LL+   +   L  AL  + KM      PD  TF + ++G C+   + +A+ +F  +   
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             E  +  YN +I+GLCK  ++  A  L +R++  G  PD VT +++I  LC  G+ D A
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             ++  M  +   P   TF  L+   V+  + S+   L  +M    L
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL 287


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 139/331 (41%), Positives = 212/331 (64%), Gaps = 9/331 (2%)

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V T+ T+INGLC+   T+ A  LF++M  E G  C+PDVVTY++IID LCKD  V++
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKM-GEAG--CQPDVVTYSTIIDSLCKDRRVNE 63

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++   MK + I+PN+ TYNSLI G C    W+EA  +  EMM   + P++VTF+ +IN
Sbjct: 64  ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN 123

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+G + +   +L+ M + GV P+ VTY+SLM+G+ L   +  AR+LF  M++KGC+ 
Sbjct: 124 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKP 183

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV+SYNILIN  CK +++ +A  L+ EM+ + + P +++YNTL+ GL Q+G L +A  L 
Sbjct: 184 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 243

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M  N  +PD  T++  +DG CK G++ +A ++F+A+++   +  +  YN LI+ +CK 
Sbjct: 244 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 303

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             LK A KLF  L  +G  P+      M HW
Sbjct: 304 RNLKEARKLFSELFVQGLQPN------MKHW 328



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 190/350 (54%), Gaps = 8/350 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+     P + ++T ++  L K  +      LFK++   G  PD+   + +I+ LCK   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + A  +   +     +PN  T+N LI GLC   R  EA+ +  ++      PN+VTF+ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LIN  C+  N   A  + + M  E G   +P+VVTY+S+++G      V +A++L   M 
Sbjct: 121 LINIFCKEGNVFEARGVLKTMT-EMGV--EPNVVTYSSLMNGYSLQAEVFEARKLFDVMI 177

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            +   P+V +YN LI G+C      EAK LF EM+  G+ PD+V++N +I+  C+ G++ 
Sbjct: 178 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 237

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           + + L + M+  G  PD  TY+ L+DGFC  G +++A  LF +M S   + ++  YNILI
Sbjct: 238 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
           +A CK + +++A  L+ E+  + ++P++  +      LF++     AL++
Sbjct: 298 DAMCKSRNLKEARKLFSELFVQGLQPNMKHWK-----LFEIWKRMAALRM 342



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 163/297 (54%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  R   P+V TY ++I G C + +   A  LF +M + G QPDVVT++ +I+  CKD +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +++   +   M  +G++P+  TYNSL+ G C   R   A  +   M+S     ++ ++++
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  CK+  V +A  + + M    + P+V+TY++L++G      + +A KL D M    
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
             PD F++   I+G CK   + EA Q+F  + +      I +YN LI+GLC++GRL+ A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            LF  +   G +PD+ T S ++   CK+G + KA  L   M++    P+ V +  L+
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 150/295 (50%), Gaps = 7/295 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+  F  M     SP + ++  L+  L    ++    ++   + S  + P++   +LL
Sbjct: 62  NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLL 121

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G    A  VL  +      PN VT++ L+NG   +  + EA +LF  +    C
Sbjct: 122 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGC 181

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V ++N LING C+ +    A +LF EM+++      PD+V+YN++IDGLC+ G + +
Sbjct: 182 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG---LTPDIVSYNTLIDGLCQLGRLRE 238

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L   M      P++ TY+ L+ GFC      +A  LF  M    ++P++V +N +I+
Sbjct: 239 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 298

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
             CK   + +  +L   +  +G+ P+   +      F +  R++  R  F+ M+S
Sbjct: 299 AMCKSRNLKEARKLFSELFVQGLQPNMKHWKL----FEIWKRMAALRMNFLIMLS 349



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 134/318 (42%), Gaps = 71/318 (22%)

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           MV++G + DV++Y  +IN  CK  +   A  L+++M     +P V+TY+T++  L +   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGL------------------------------ 444
           + +AL +   M+   + P+ FT+ + I GL                              
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 445 -----CKNGFVLEAVQVFQAIRNCKCELRIETY--------------------------- 472
                CK G V EA  V + +     E  + TY                           
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 473 --------NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                   N LING CK  R+  A +LF+ + H+G  PD+V+ +T+I  LC+ G++ +A+
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           DL  +M     +P   T+  LL GF +    +K   L   M +  L   ++ + + ++D 
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYL-KPNMVMYNILIDA 299

Query: 585 LSKDKKYRECLNQFRHLL 602
           + K +  +E    F  L 
Sbjct: 300 MCKSRNLKEARKLFSELF 317


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 157/518 (30%), Positives = 273/518 (52%), Gaps = 5/518 (0%)

Query: 51  LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           + D  + G +   EAV  F+ M      P + S+  ++ +L +   +     ++ R+   
Sbjct: 83  MRDYGRKGKV--QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G++PD++   + +   C  G  + A  +L  +       N V++  +I+G   E   +EA
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             LF ++      P+++TFN LI+ LC+  N   + KLF +++     +C P++ T+N  
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR--GVC-PNLFTFNIF 257

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           I GLC+ G +D+A  LL  +    + P+VI+YN+LICGFC      EA+C   +M+++GV
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
           +P+  T+N +IN  CK G M   +++L   + +G  PD  TY+SL++G C  G ++RA  
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +F   + KG +H +  YN L+    K   V  A+ L ++M+     P + TYN +++GL 
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           ++G L DA  +++       +PD FTF T IDG CK   + +A+++   + +      + 
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYN L+NGLCK  +L      F  +  KG  P+++T + +I   CK+ ++ +A +L  +M
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           + +   P  VT CTL+ G   N +  K   L   +  E
Sbjct: 558 KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 162/514 (31%), Positives = 272/514 (52%), Gaps = 4/514 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA + FD M+K    P + +F  L+ +L K         LF ++   G+ P+LF  N+ I
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC+ G    A  +L  I+    TP+ +++N LI G C   +++EA     K+     +
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T+NT+ING C+      A K+  + + + G I  PD  TY+S+I+GLC DG +++A
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFK-GFI--PDEFTYSSLINGLCNDGDMNRA 375

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  +  ++    ++I YN+L+ G        +A  L  +MM++G  PD+ T+N ++N 
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G +   N +L   I +G  PD  T+N+L+DG+C    + +A E+  +M+S G   D
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN L+N  CK +K+++ V  ++ ML +   P++ITYN L+    +   + +A++L  
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFK 555

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNCLINGLCKM 482
           +M+   + PD  T  T I GLC NG + +A ++F  I +  K       +N +IN  C+ 
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEK 615

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             +  A KLFH++      PD  T   MI   CK G +D A+  LL+  +K  VPS  T 
Sbjct: 616 LNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTC 675

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
             +L      ++ S+ VV+++ M    +V  +++
Sbjct: 676 GKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 148/504 (29%), Positives = 255/504 (50%), Gaps = 6/504 (1%)

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
            +  +    V++F+R++     P +   N ++N L + G  S A  V  R+      P+ 
Sbjct: 87  GRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDV 146

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            T    +   C  GR   A RL   +    C+ N V++  +I+G  +    + A  LF+E
Sbjct: 147 YTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDE 206

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M+ +   IC PD++T+N +I  LCK G V ++++L  ++  R + PN+ T+N  I G C 
Sbjct: 207 MLKQ--GIC-PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
                EA  L   ++  G+ PDV+++N +I   CK  K+ +    L  M+  GV P+  T
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YN++++GFC  G +  A ++    + KG   D ++Y+ LIN  C D  +  A+ ++ E +
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
            +  + S+I YNTL+ GL + G +  AL+L+  M  +   PD +T+   ++GLCK G + 
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A  +        C   I T+N LI+G CK   +  A ++   +   G  PDV+T +T++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           + LCK  ++D   D    M  K C P+ +T+  L+  F ++ K S+ + L  +M    L 
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 572 VSDLSLSSKVVDLLSK---DKKYR 592
              ++L + +  L S    DK Y 
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYE 587



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 237/473 (50%), Gaps = 39/473 (8%)

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           +G++ EA  +F++++ + C+P+V ++N ++N L        A K++  M  + G    PD
Sbjct: 89  KGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM-KDIGIY--PD 145

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V T+   +   C  G    A  LL  M  +    N ++Y ++I GF   +   EA  LF 
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM+  G+ PD++TFN +I+  CK G + +  +L   +++RGV P+  T+N  + G C  G
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            I  A  L  S+VS+G   DV SYN LI   CK  K+ +A C   +M++  + P+  TYN
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC------------------ 445
           T+++G  + G + +A K++        +PD FT+++ I+GLC                  
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 446 -----------------KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
                            K G VL+A+Q+ + +    C   I TYN ++NGLCKMG L  A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             + +    KG IPD+ T +T+I   CK+  MDKA ++L  M +    P  +T+ TLL G
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             +  K   VV     M  EK    ++   + +++   KD+K  E +  F+ +
Sbjct: 506 LCKARKLDNVVDTFKAM-LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 7/310 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F  L+    K +  D  + +   + S+G+ PD+   N L+N LCK          
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +L    TPN +T+N LI   C + ++ EA  LFK++      P++VT  TLI GLC 
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A +LF  +  E+          +N +I+  C+   V  A++L  +M   +  P+
Sbjct: 579 NGELDKAYELFVTIEKEYKF--SYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPD 636

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             TY  +I  +C   +   A    +E +  G+ P   T   ++N  C   ++ +   ++ 
Sbjct: 637 NYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIIN 696

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           LM+Q G+ P+ V  NS+ +      +   A ++ V  + K      YSY +L +     +
Sbjct: 697 LMVQNGIVPEEV--NSIFEA---DKKEVAAPKIVVEYLLKKSHITYYSYELLYDGIRNRK 751

Query: 379 KVEDAVCLYR 388
            VE    LY+
Sbjct: 752 VVEARPLLYK 761



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 131/277 (47%), Gaps = 9/277 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+   D M+    +P + ++  LL  L K ++ D VV  FK +   G  P++   N+L
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN-VFA 181
           I   CK    S A  +   +     TP+ VT   LI GLC+ G + +A  LF  +   + 
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYK 597

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              +   FN +IN  C   N  +A KLF +M    G+ C PD  TY  +ID  CK G +D
Sbjct: 598 FSYSTAIFNIMINAFCEKLNVSMAEKLFHKM---GGSDCAPDNYTYRVMIDSYCKTGNID 654

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A   LL+   + + P+  T   ++   C      EA  +   M+ NG+ P+ V  N++ 
Sbjct: 655 LAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV--NSIF 712

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             + K+    K+  ++E ++++  +    +Y  L DG
Sbjct: 713 EADKKEVAAPKI--VVEYLLKKS-HITYYSYELLYDG 746



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 3/281 (1%)

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV--TYNSLMDGFCLVGR 344
           ++G +  + T+  MI      GK + +  +L  M ++ V+   +   Y  +M  +   G+
Sbjct: 33  EDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM-RKNVDSKMLEGVYIGIMRDYGRKGK 91

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A  +F  M    C   V SYN ++N   +      A  +Y  M    I P V T+  
Sbjct: 92  VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            +      G    AL+L++ M       ++ ++   I G  K    +EA  +F  +    
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I T+N LI+ LCK G ++ + KLF ++  +G  P++ T +  I  LC++G +D+A 
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            LL  + ++   P  +++ TL+ GF +++K  +    LHKM
Sbjct: 272 RLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 1/157 (0%)

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           + G V EAV VF+ +    CE  +++YN ++N L + G    A K++ R++  G  PDV 
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T +  +   C  G+   A  LL +M  + C  + V++C ++ GF + N + +   L  +M
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             +  +  D+   +K++ +L K    +E    F  ++
Sbjct: 208 LKQG-ICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/462 (31%), Positives = 258/462 (55%), Gaps = 5/462 (1%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P+ +   +++   CK G     + +  ++L +  +P+ + +N LI+G   +GR+ EA RL
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           ++++     +P++ T+N+L+N  C+      A++LF+ M  +     +PDVVTY++II G
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKG---FEPDVVTYSTIISG 122

Query: 234 LCKDGFVDKAKELLL-QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           LCK G V +A E+L  +M +R  + N + YN+LI G C  ++ + A  L  EM   G  P
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP 182

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D +T+N +++  C+ GK+ +  +  + M  RG +PD V YN L+D     G+   A +LF
Sbjct: 183 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLF 242

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             +++KG   D  +YN ++    +   +++A  ++++M++    P+  TY+ +LSG  + 
Sbjct: 243 KDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRA 302

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
             + DA K++++M     VPD  T+   +DGLCK   V +A ++F  + +  C   I +Y
Sbjct: 303 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 362

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           + ++NGLCK  ++  A  LF R+  +  +PDVVT + ++  LCK G++D+A DLL  M  
Sbjct: 363 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTC 422

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
             C P  V + TL+ G  +  +  +   L   M  EK  +SD
Sbjct: 423 SGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM-KEKGFLSD 463



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 156/458 (34%), Positives = 254/458 (55%), Gaps = 4/458 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP   +F ++L    K  +      LF+++  NG+ PD    N+LI+   K G    A  
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   ++     P+  T+N L+N  C E ++ EA  LFK +     +P+VVT++T+I+GLC
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 198 RTRNTLVALK-LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           +T     AL+ LF +M+ E G  C  + V YN++I+GLCKD  +++A +LL +M  +   
Sbjct: 125 KTGKVTEALEMLFHKMI-ERG--CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+ ITYN+++ G C +    EAK  F  M   G  PDVV +N +++   K+GK D+  +L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
            + +I +G  PDTVTYNS++ G      +  A E+F  MV+ GC  +  +Y+I+++ +C+
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
            +KV+DA  +  EM      P V+TYN LL GL +   +  A +L   M  N   PD  +
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++  ++GLCK   V +A  +F  +   K    + T+N L++GLCK G+L  A  L  ++ 
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
             G  PD V  +T+++ L K+G+  +A+ L   M+ K 
Sbjct: 422 CSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/428 (32%), Positives = 225/428 (52%), Gaps = 33/428 (7%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            F+ M+    SP    + IL+   AK  + D    L++ + S GL P ++  N L+N  C
Sbjct: 30  LFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFC 89

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR-LFKKLNVFACDPNV 186
           K      A  +   +    F P+ VT++ +I+GLC  G++ EA   LF K+    C  N 
Sbjct: 90  KETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANT 149

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNE------------FGAICK------------- 221
           V +N LINGLC+  N   A KL EEM ++               +C+             
Sbjct: 150 VAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDS 209

Query: 222 -------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                  PDVV YN ++D L K+G  D+A +L   +  +   P+ +TYNS++ G     +
Sbjct: 210 MPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
             EA+ +F +M+ +G  P+  T++ +++ +C+  K+D  +++LE M + G  PD VTYN 
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L+DG C    + +A ELF +MV  GC  D+ SY++++N  CK  KV DA  L+  M+  +
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 389

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           + P V+T+N L+ GL + G L +A  L+D+M  +   PD   + T ++GL K G  ++A 
Sbjct: 390 LVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQAD 449

Query: 455 QVFQAIRN 462
           ++ QA++ 
Sbjct: 450 RLTQAMKE 457



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 197/388 (50%), Gaps = 36/388 (9%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C P+  T+  ++   CK G +    +L  QM D  I+P+ I YN LI G+       EA 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L+ EM+  G++P + T+N+++N  CK+ KM +   L + M ++G  PD VTY++++ G 
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 340 CLVGRISRARE-LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           C  G+++ A E LF  M+ +GC  +  +YN LIN  CKD+ +E A  L  EM S+   P 
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQ------------------------------LN 428
            ITYNT+LSGL ++G + +A +  D M                                 
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 429 DVV-----PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           DV+     PD+ T+ + + GL +   + EA ++F+ +    C     TY+ +++G C+  
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           ++  A K+   +   G +PDVVT + ++  LCK   +DKA++L   M    C P  V++ 
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 363

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +L G  + NK     VL  +M   KLV
Sbjct: 364 VVLNGLCKTNKVHDARVLFDRMIERKLV 391



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 175/315 (55%), Gaps = 1/315 (0%)

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           R  +PN  T+  ++  FC     ++   LF +M+DNG+ PD + +N +I+   K G++D+
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
            NRL E M+  G+ P   TYNSL++ FC   ++  A ELF +M  KG   DV +Y+ +I+
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 373 ANCKDQKVEDAV-CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
             CK  KV +A+  L+ +M+      + + YN L++GL +  N+  A KL+++M     V
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD+ T+ T + GLC+ G V EA Q F ++ +      +  YN L++ L K G+   A KL
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F  +  KG +PD VT ++++  L ++  MD+A ++   M A  C P+  T+  +L G  +
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 552 NNKKSKVVVLLHKMA 566
             K      +L +M+
Sbjct: 302 AKKVDDAHKVLEEMS 316



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 197/373 (52%), Gaps = 4/373 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAK-NKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           EA+  F  M +    P + +++ +++ L K  K  + +  LF ++   G   +    N L
Sbjct: 96  EAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNAL 155

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LCK      A+ +L  +    + P+ +T+N +++GLC  G++ EA + F  +     
Sbjct: 156 INGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGY 215

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VV +N L++ L +   T  A+KLF++++ + G +  PD VTYNSI+ GL +   +D+
Sbjct: 216 SPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK-GYM--PDTVTYNSILLGLARKSNMDE 272

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+E+  +M      PN  TY+ ++ G C      +A  +  EM   G  PDVVT+N +++
Sbjct: 273 AEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 332

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK   +DK + L   M+  G  PD V+Y+ +++G C   ++  AR LF  M+ +    
Sbjct: 333 GLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP 392

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV ++NIL++  CK  K+++A  L  +M      P  + YNTL++GL + G    A +L 
Sbjct: 393 DVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLT 452

Query: 423 DKMQLNDVVPDSF 435
             M+    + D F
Sbjct: 453 QAMKEKGFLSDCF 465



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 144/266 (54%), Gaps = 3/266 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA  FFD M     SP + ++  LL  L K  + D  + LFK + + G  PD    N +
Sbjct: 201 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSI 260

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  L +      A  +  +++ S   PN  T++ +++G C   ++ +A ++ ++++    
Sbjct: 261 LLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGA 320

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VVT+N L++GLC+T     A +LF  MV+     C PD+V+Y+ +++GLCK   V  
Sbjct: 321 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG---CAPDIVSYSVVLNGLCKTNKVHD 377

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ L  +M +R + P+V+T+N L+ G C      EAK L  +M  +G  PD V +N ++N
Sbjct: 378 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMN 437

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPD 328
              K G+  + +RL + M ++G   D
Sbjct: 438 GLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 122/233 (52%), Gaps = 5/233 (2%)

Query: 37  SSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQ 96
           S  +  D  +    L+  +K G   ++EA+  F  +I     P   ++  +L  LA+   
Sbjct: 212 SRGYSPDVVAYNGLLDALYKEGK--TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269

Query: 97  YDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNF 156
            D    +FK++ ++G  P+    +++++  C+      A  VL  + +    P+ VT+N 
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           L++GLC    + +A  LF  +    C P++V+++ ++NGLC+T     A  LF+ M+   
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER- 388

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                PDVVT+N ++DGLCK G +D+AK+LL QM      P+ + YN+L+ G 
Sbjct: 389 --KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGL 439



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 36/184 (19%)

Query: 432 PDSFTFATYI-----------------------------------DGLCKNGFVLEAVQV 456
           P+ +TF   +                                   DG  K G V EA ++
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           ++ + +   E  I TYN L+N  CK  ++K A +LF  +  KG  PDVVT ST+I  LCK
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 517 EGQMDKANDLLL-DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
            G++ +A ++L   M  + C  + V +  L+ G  ++    +   LL +MA++  V  ++
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 576 SLSS 579
           + ++
Sbjct: 186 TYNT 189


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 157/518 (30%), Positives = 273/518 (52%), Gaps = 5/518 (0%)

Query: 51  LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           + D  + G +   EAV  F+ M      P + S+  ++ +L +   +     ++ R+   
Sbjct: 83  MRDYGRKGKV--QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G++PD++   + +   C  G  + A  +L  +       N V++  +I+G   E   +EA
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             LF ++      P+++TFN LI+ LC+  N   + KLF +++     +C P++ T+N  
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR--GVC-PNLFTFNIF 257

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           I GLC+ G +D+A  LL  +    + P+VI+YN+LICGFC      EA+C   +M+++GV
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
           +P+  T+N +IN  CK G M   +++L   + +G  PD  TY+SL++G C  G ++RA  
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +F   + KG +H +  YN L+    K   V  A+ L ++M+     P + TYN +++GL 
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           ++G L DA  +++       +PD FTF T IDG CK   + +A+++   + +      + 
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYN L+NGLCK  +L      F  +  KG  P+++T + +I   CK+ ++ +A +L  +M
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           + +   P  VT CTL+ G   N +  K   L   +  E
Sbjct: 558 KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595



 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 162/514 (31%), Positives = 271/514 (52%), Gaps = 4/514 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA + FD M+K    P + +F  L+ +L K         LF ++   G+ P+LF  N+ I
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC+ G    A  +L  I+    TP+ +++N LI G C   +++EA     K+     +
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T+NT+ING C+      A K+  + + + G I  PD  TY+S+I+GLC DG +++A
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFK-GFI--PDEFTYSSLINGLCNDGDMNRA 375

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  +  ++    ++I YN+L+ G        +A  L  +MM++G  PD+ T+N ++N 
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G +   N +L   I +G  PD  T+N+L+DG+C    + +A E+  +M+S G   D
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN L+N  CK +K+++ V  ++ ML +   P++ITYN L+    +   + +A++L  
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFK 555

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNCLINGLCKM 482
           +M+   + PD  T  T I GLC NG + +A ++F  I +  K       +N +IN  C  
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXK 615

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             +  A KLFH++      PD  T   MI   CK G +D A+  LL+  +K  VPS  T 
Sbjct: 616 LNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTC 675

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
             +L      ++ S+ VV+++ M    +V  +++
Sbjct: 676 GKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 148/504 (29%), Positives = 255/504 (50%), Gaps = 6/504 (1%)

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
            +  +    V++F+R++     P +   N ++N L + G  S A  V  R+      P+ 
Sbjct: 87  GRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDV 146

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            T    +   C  GR   A RL   +    C+ N V++  +I+G  +    + A  LF+E
Sbjct: 147 YTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDE 206

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M+ +   IC PD++T+N +I  LCK G V ++++L  ++  R + PN+ T+N  I G C 
Sbjct: 207 MLKQ--GIC-PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
                EA  L   ++  G+ PDV+++N +I   CK  K+ +    L  M+  GV P+  T
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YN++++GFC  G +  A ++    + KG   D ++Y+ LIN  C D  +  A+ ++ E +
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
            +  + S+I YNTL+ GL + G +  AL+L+  M  +   PD +T+   ++GLCK G + 
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A  +        C   I T+N LI+G CK   +  A ++   +   G  PDV+T +T++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           + LCK  ++D   D    M  K C P+ +T+  L+  F ++ K S+ + L  +M    L 
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 572 VSDLSLSSKVVDLLSK---DKKYR 592
              ++L + +  L S    DK Y 
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYE 587



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 237/473 (50%), Gaps = 39/473 (8%)

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           +G++ EA  +F++++ + C+P+V ++N ++N L        A K++  M  + G    PD
Sbjct: 89  KGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM-KDIGIY--PD 145

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V T+   +   C  G    A  LL  M  +    N ++Y ++I GF   +   EA  LF 
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM+  G+ PD++TFN +I+  CK G + +  +L   +++RGV P+  T+N  + G C  G
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            I  A  L  S+VS+G   DV SYN LI   CK  K+ +A C   +M++  + P+  TYN
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC------------------ 445
           T+++G  + G + +A K++        +PD FT+++ I+GLC                  
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 446 -----------------KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
                            K G VL+A+Q+ + +    C   I TYN ++NGLCKMG L  A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             + +    KG IPD+ T +T+I   CK+  MDKA ++L  M +    P  +T+ TLL G
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             +  K   VV     M  EK    ++   + +++   KD+K  E +  F+ +
Sbjct: 506 LCKARKLDNVVDTFKAM-LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 7/295 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F  L+    K +  D  + +   + S+G+ PD+   N L+N LCK          
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +L    TPN +T+N LI   C + ++ EA  LFK++      P++VT  TLI GLC 
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A +LF  +  E+          +N +I+  C    V  A++L  +M   +  P+
Sbjct: 579 NGELDKAYELFVTIEKEYKF--SYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPD 636

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             TY  +I  +C   +   A    +E +  G+ P   T   ++N  C   ++ +   ++ 
Sbjct: 637 NYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIIN 696

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           LM+Q G+ P+ V  NS+ +      +   A ++ V  + K      YSY +L + 
Sbjct: 697 LMVQNGIVPEEV--NSIFEA---DKKEVAAPKIVVEYLLKKSHITYYSYELLYDG 746



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 131/277 (47%), Gaps = 9/277 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+   D M+    +P + ++  LL  L K ++ D VV  FK +   G  P++   N+L
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN-VFA 181
           I   CK    S A  +   +     TP+ VT   LI GLC+ G + +A  LF  +   + 
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYK 597

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              +   FN +IN  C   N  +A KLF +M    G+ C PD  TY  +ID  CK G +D
Sbjct: 598 FSYSTAIFNIMINAFCXKLNVSMAEKLFHKMG---GSDCAPDNYTYRVMIDSYCKTGNID 654

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A   LL+   + + P+  T   ++   C      EA  +   M+ NG+ P+ V  N++ 
Sbjct: 655 LAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV--NSIF 712

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             + K+    K+  ++E ++++  +    +Y  L DG
Sbjct: 713 EADKKEVAAPKI--VVEYLLKKS-HITYYSYELLYDG 746



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 3/281 (1%)

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV--TYNSLMDGFCLVGR 344
           ++G +  + T+  MI      GK + +  +L  M ++ V+   +   Y  +M  +   G+
Sbjct: 33  EDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM-RKNVDSKMLEGVYIGIMRDYGRKGK 91

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A  +F  M    C   V SYN ++N   +      A  +Y  M    I P V T+  
Sbjct: 92  VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            +      G    AL+L++ M       ++ ++   I G  K    +EA  +F  +    
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I T+N LI+ LCK G ++ + KLF ++  +G  P++ T +  I  LC++G +D+A 
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            LL  + ++   P  +++ TL+ GF +++K  +    LHKM
Sbjct: 272 RLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 1/157 (0%)

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           + G V EAV VF+ +    CE  +++YN ++N L + G    A K++ R++  G  PDV 
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T +  +   C  G+   A  LL +M  + C  + V++C ++ GF + N + +   L  +M
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             +  +  D+   +K++ +L K    +E    F  ++
Sbjct: 208 LKQG-ICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 156/490 (31%), Positives = 265/490 (54%), Gaps = 3/490 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M +   +P    + ++L    +   + + V + + L++ G   D+   NL++
Sbjct: 140 DALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVL 199

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N +C  G    A  +L  +      P+ V++N ++ GLC   R      L +++   AC 
Sbjct: 200 NAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACP 259

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+VTFNTLI+ LCR        ++  +MV E G  C PD+  Y +IIDG+CK+G ++ A
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMV-EHG--CTPDIRMYATIIDGICKEGHLEVA 316

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E+L +M    + PNV+ YN+L+ G C  + W+E + L  EM D     D VTFN ++++
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C++G +D+V  LLE M++RG  PD +TY ++++GFC  G I  A  L  SM + GC+ +
Sbjct: 377 FCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             SY I++   C  ++  DA  L  +M+ +    + IT+NTL++ L + G +  A++L+ 
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M +N   PD  +++T IDGL K G   EA+++   + N         Y+ + + L + G
Sbjct: 497 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+    ++F  +Q      D V  + +I  LCK G+ ++A + L  M +  CVP+E T+ 
Sbjct: 557 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 616

Query: 544 TLLRGFVQNN 553
            L+RG     
Sbjct: 617 ILIRGLASEG 626



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 234/453 (51%), Gaps = 4/453 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN  T+  ++  LCA GRI +A  +  ++    C P    ++ ++   CR      A+++
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            E++       C  DV   N +++ +C  G VD+A  LL  +      P+V++YN+++ G
Sbjct: 180 LEDL---HARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKG 236

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C    W   + L  EM+     P++VTFN +I+Y C++G  ++V+ +L  M++ G  PD
Sbjct: 237 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 296

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
              Y +++DG C  G +  A E+   M S G + +V  YN L+   C  ++ E+   L  
Sbjct: 297 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM  +      +T+N L+    Q G +   ++L+++M     +PD  T+ T I+G CK G
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEG 416

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EAV + +++  C C+    +Y  ++ GLC   R   A  L  ++  +G   + +T +
Sbjct: 417 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFN 476

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I++LCK+G +++A +LL  M    C P  +++ T++ G  +  K  + + LL+ M  +
Sbjct: 477 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 536

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            +  + +  SS +   LS++ +  + +  F ++
Sbjct: 537 GMSPNTIIYSS-IASALSREGRINKVIQMFDNI 568



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 218/439 (49%), Gaps = 3/439 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA++    +      P + S+  +L  L   K++  V  L + +      P++   N L
Sbjct: 209 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC+ G+      VL +++    TP+   +  +I+G+C EG +  A  +  ++  +  
Sbjct: 269 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 328

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVV +NTL+ GLC         +L  EM   F   C  D VT+N ++D  C++G VD+
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEM---FDKDCPLDDVTFNILVDFFCQNGLVDR 385

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
             ELL QM +R   P+VITY ++I GFC      EA  L   M   G +P+ +++  ++ 
Sbjct: 386 VIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   +      L+  MIQ+G   + +T+N+L++  C  G + +A EL   M+  GC  
Sbjct: 446 GLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 505

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ SY+ +I+   K  K ++A+ L   M+++ + P+ I Y+++ S L + G +   +++ 
Sbjct: 506 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF 565

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D +Q   +  D+  +   I  LCK G    A++    + +  C     TY  LI GL   
Sbjct: 566 DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 625

Query: 483 GRLKTACKLFHRLQHKGPI 501
           G +K A ++   L  KG +
Sbjct: 626 GFVKEAQEMLTELCSKGAL 644



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 162/341 (47%), Gaps = 3/341 (0%)

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN+++ G C+ G ++ A+ L   +    + PN  TY  ++   C      +A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G  P    ++ ++   C+ G      R+LE +  RG   D    N +++  C  G + 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  L   + S GC  DV SYN ++   C  ++      L  EM+     P+++T+NTL+
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           S L + G      +++ +M  +   PD   +AT IDG+CK G +  A ++   + +   +
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             +  YN L+ GLC   R +   +L   +  K    D VT + ++ + C+ G +D+  +L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           L  M  + C+P  +T+ T++ GF +     + V+LL  M A
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 2/135 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  ++   K+G   ++EA+   + M+    SP    ++ + + L++  + + V+ 
Sbjct: 506 DLISYSTVIDGLGKAGK--TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +    +  D  + N +I+ LCK G T  A   L  ++ S   PN  T+  LI GL 
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLA 623

Query: 163 AEGRIMEAARLFKKL 177
           +EG + EA  +  +L
Sbjct: 624 SEGFVKEAQEMLTEL 638


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 173/543 (31%), Positives = 284/543 (52%), Gaps = 54/543 (9%)

Query: 13   ASKAGYRCNFWCSFGRPPNPKTDLS--------SHHFKDGTSIAKFLNDRHKSGNITSNE 64
            +S  G+    +    R  NP+T LS         HH+++     +  N+ H    I  ++
Sbjct: 536  SSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRE-----RLRNELH---CIKFDD 587

Query: 65   AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
            A   F  M++ +P P +  FT +LT++AK  ++D V+ L+ ++ + G+  DL+   +LI+
Sbjct: 588  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 647

Query: 125  CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            C C+    S A  +LG++++  F P+                                  
Sbjct: 648  CFCRCSRLSLALALLGKMMKLGFRPS---------------------------------- 673

Query: 185  NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
             +VT  +L+NG C+      A+ L + M + FG +  P+VV YN++I+GLCK+  ++ A 
Sbjct: 674  -IVTLGSLLNGFCQGNRFQEAVSLVDSM-DGFGFV--PNVVIYNTVINGLCKNRDLNNAL 729

Query: 245  ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            E+   M+ + I  + +TYN+LI G      W +A  L  +M+   + P+V+ F A+I+  
Sbjct: 730  EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 789

Query: 305  CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
             K+G + +   L + MI+R V P+  TYNSL++GFC+ G +  A+ +F  MVSKGC  DV
Sbjct: 790  VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 849

Query: 365  YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             +YN LI   CK ++VED + L+ EM  + +     TYNTL+ G  Q G L  A K+ ++
Sbjct: 850  VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 909

Query: 425  MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
            M    V PD  T+   +D LC NG + +A+ + + ++  + ++ I TYN +I GLC+  +
Sbjct: 910  MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 969

Query: 485  LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
            LK A  LF  L  KG  PD +   TMI  LC++G   +A+ L   M+    +PSE  +  
Sbjct: 970  LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 1029

Query: 545  LLR 547
             LR
Sbjct: 1030 TLR 1032



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 158/479 (32%), Positives = 254/479 (53%), Gaps = 40/479 (8%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           +I   +A   F  M+  +P P +  FT LLT  A  ++Y+TV+   +++   G+  DL+ 
Sbjct: 49  SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
             +LI+C C+    S A  VLG++++  + P+ VTF  L++G C   RI +A  L   + 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-FGAICKPDVVTYNSIIDGLCKD 237
               +PNVV +NTLI+GLC+     +AL+L  EM  +  GA    DVVTYN+++ GLC  
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA----DVVTYNTLLTGLCYS 224

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G    A  +L  M  R+INP+V+T+ +LI  F    +  EA+ L+ EM+ + V P+ VT+
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N++IN  C  G++    +  +LM  +G  P+ VTYN+L+ GFC    +    +LF  M  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +G   D+++YN LI+  C+  K+  A+ ++  M+S R+ P +IT+  LL G         
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG--------- 395

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
                                     LC NG +  A+  F  +R  +  + I  YN +I+
Sbjct: 396 --------------------------LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIH 429

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           GLCK  +++ A +LF RL  +G  PD  T + MI  LCK G   +A++L+  M+ +  +
Sbjct: 430 GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 215/437 (49%), Gaps = 3/437 (0%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           AF +   ++ S   P+ V F  L+       R        +K+ ++    ++ +F  LI+
Sbjct: 55  AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             CR      AL +  +M+ + G   +P +VT+ S++ G C    +  A  L++ M    
Sbjct: 115 CFCRCSRLSFALSVLGKMM-KLGY--EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PNV+ YN+LI G C   +   A  L  EM   G+  DVVT+N ++   C  G+     
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           R+L  M++R +NPD VT+ +L+D F   G +  A+EL+  M+      +  +YN +IN  
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   ++ DA   +  M S+   P+V+TYNTL+SG  +   + + +KL  +M       D 
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           FT+ T I G C+ G +  A+ +F  + + +    I T+  L++GLC  G +++A   F  
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           ++       +V  + MIH LCK  +++KA +L   +  +   P   T+  ++ G  +N  
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471

Query: 555 KSKVVVLLHKMAAEKLV 571
           + +   L+ +M  E ++
Sbjct: 472 RREADELIRRMKEEGII 488



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 220/440 (50%), Gaps = 3/440 (0%)

Query: 135  AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
            AF +   +L+S   P+ V F  ++  +    +      L+ K+       ++ +F  LI+
Sbjct: 588  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 647

Query: 195  GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
              CR     +AL L  +M+ + G   +P +VT  S+++G C+     +A  L+  M    
Sbjct: 648  CFCRCSRLSLALALLGKMM-KLGF--RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704

Query: 255  INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
              PNV+ YN++I G C   D   A  +F  M   G++ D VT+N +I+     G+     
Sbjct: 705  FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764

Query: 315  RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            RLL  M++R ++P+ + + +L+D F   G +  AR L+  M+ +    +V++YN LIN  
Sbjct: 765  RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 824

Query: 375  CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            C    + DA  ++  M+S+   P V+TYNTL++G  +   + D +KL  +M    +V D+
Sbjct: 825  CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 884

Query: 435  FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            FT+ T I G C+ G +  A +VF  + +C     I TYN L++ LC  G+++ A  +   
Sbjct: 885  FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 944

Query: 495  LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            LQ      D++T + +I  LC+  ++ +A  L   +  K   P  + + T++ G  +   
Sbjct: 945  LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 1004

Query: 555  KSKVVVLLHKMAAEKLVVSD 574
            + +   L  +M  +  + S+
Sbjct: 1005 QREADKLCRRMKEDGFMPSE 1024



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 189/385 (49%), Gaps = 3/385 (0%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A  LF EMV+   +   P +V +  ++         +       +M+   I+ ++ ++  
Sbjct: 55  AFALFFEMVH---SQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI  FC       A  +  +MM  G +P +VTF ++++  C   ++     L+ LM++ G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             P+ V YN+L+DG C  G ++ A EL   M  KG   DV +YN L+   C   +  DA 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            + R+M+   I P V+T+  L+    + GNL +A +L  +M  + V P++ T+ + I+GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C +G + +A + F  + +  C   + TYN LI+G CK   +    KLF R+  +G   D+
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
            T +T+IH  C+ G++  A D+   M ++   P  +T C LL G   N +    +V    
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDK 589
           M   +  +  ++ +  +  L   DK
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADK 436



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 203/408 (49%), Gaps = 6/408 (1%)

Query: 198 RTRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           R RN L  +K F++  + F  + +    P +V +  ++  + K    D    L  +M++ 
Sbjct: 575 RLRNELHCIK-FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL 633

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I+ ++ ++  LI  FC       A  L  +MM  G +P +VT  +++N  C+  +  + 
Sbjct: 634 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 693

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L++ M   G  P+ V YN++++G C    ++ A E+F  M  KG R D  +YN LI+ 
Sbjct: 694 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 753

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
                +  DA  L R+M+  +I P+VI +  L+    + GNL +A  L  +M    VVP+
Sbjct: 754 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 813

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            FT+ + I+G C +G + +A  +F  + +  C   + TYN LI G CK  R++   KLF 
Sbjct: 814 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 873

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            + ++G + D  T +T+IH  C+ G+++ A  +   M      P  VT+  LL     N 
Sbjct: 874 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 933

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           K  K +V++  +   ++ V D+   + ++  L +  K +E    FR L
Sbjct: 934 KIEKALVMVEDLQKSEMDV-DIITYNIIIQGLCRTDKLKEAWCLFRSL 980



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 155/327 (47%), Gaps = 11/327 (3%)

Query: 253 RNINPNVITYNS-----------LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           R +NPN++   +           L  GF     +++A  LF EM+ +   P +V F  ++
Sbjct: 19  RVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLL 78

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
                  + + V    + M   G++ D  ++  L+  FC   R+S A  +   M+  G  
Sbjct: 79  TATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYE 138

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             + ++  L++  C   ++ DA  L   M+     P+V+ YNTL+ GL + G L  AL+L
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +++M+   +  D  T+ T + GLC +G   +A ++ + +        + T+  LI+   K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G L  A +L+  +      P+ VT +++I+ LC  G++  A      M +K C P+ VT
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           + TL+ GF +     + + L  +M+ E
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCE 345


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 168/539 (31%), Positives = 278/539 (51%), Gaps = 7/539 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  F   M+  +  P   ++  L+   +   Q+   V +FK +  + + PD+  L++L
Sbjct: 284 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 343

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LCK G    A  V   +      P+  ++N ++NG   +G +++   LF  +     
Sbjct: 344 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 403

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  TFN LI           A+ +F EM +      KPDVVTY ++I  LC+ G +D 
Sbjct: 404 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG---VKPDVVTYRTVIAALCRIGKMDD 460

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E   QM D+ + P+   YN LI GFC      +AK L  E+M+NG+  D+V F+++IN
Sbjct: 461 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 520

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++     + +L +  G++PD V Y+ LMDG+CLVG++ +A  +F +MVS G   
Sbjct: 521 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 580

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V  Y  L+N  CK  ++++ + L+REML   I+PS I Y+ ++ GLFQ G    A    
Sbjct: 581 NVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKF 640

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M  + +  D  T+   + GL KN    EA+ +F+ +R    ++ I T N +I+G+ + 
Sbjct: 641 HEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQT 700

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            R++ A  LF  +     +P+VVT S MI  L KEG +++A D+   M+   C P+    
Sbjct: 701 RRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLL 760

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             ++R  ++ N+  +    L K+      +  L+ +  +VDL S     RE   Q R L
Sbjct: 761 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT-AMLLVDLFSSKGTCRE---QIRFL 815



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 155/511 (30%), Positives = 270/511 (52%), Gaps = 7/511 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           SP   ++ IL+    +  + +  ++ F +L   GL  ++ + N L+   C+   T  A  
Sbjct: 121 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 180

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           ++L R       P+  +++ L+  LC +G+  +A  L + +      C PNVV +NT+I+
Sbjct: 181 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 240

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A  LF+EMV        PD+VTYNS++  LCK   +DKA+  L QM ++ 
Sbjct: 241 GFFKEGDVNKACDLFKEMVQRG---IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TYN+LI G+     WKEA  +F EM  + + PDVVT + ++   CK GK+ +  
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 357

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + M  +G NPD  +YN +++G+   G +    +LF  M+  G   D Y++N+LI A 
Sbjct: 358 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 417

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
                ++ A+ ++ EM    ++P V+TY T+++ L ++G + DA++  ++M    V PD 
Sbjct: 418 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 477

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           + +   I G C +G +L+A ++   I N    L I  ++ +IN LCK+GR+  A  +F  
Sbjct: 478 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 537

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             + G  PD V  S ++   C  G+M+KA  +   M +    P+ V +CTL+ G+ +  +
Sbjct: 538 TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGR 597

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
             + + L  +M    +  S + L S ++D L
Sbjct: 598 IDEGLSLFREMLQRGIKPSTI-LYSIIIDGL 627



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 186/397 (46%), Gaps = 3/397 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F+ M      P + ++  ++  L +  + D  +  F ++   G+ PD +  N L
Sbjct: 424 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 483

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C  G    A  ++  I+ +    + V F+ +IN LC  GR+M+A  +F        
Sbjct: 484 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 543

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ V ++ L++G C       AL++F+ MV+   A  +P+VV Y ++++G CK G +D+
Sbjct: 544 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS---AGIEPNVVVYCTLVNGYCKIGRIDE 600

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              L  +M  R I P+ I Y+ +I G         AK  F EM ++G+  D+ T+N ++ 
Sbjct: 601 GLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLR 660

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+   D+   L + +    V  + +T N+++DG     R+  A++LF S+       
Sbjct: 661 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVP 720

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V +Y+I+I    K+  VE+A  ++  M +    P+    N ++  L +   +  A   +
Sbjct: 721 NVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYL 780

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            K+   +   +  T    +D     G   E ++   A
Sbjct: 781 SKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPA 817


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/504 (31%), Positives = 255/504 (50%), Gaps = 41/504 (8%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F + M+     P +   T L+    +  +      + + L  +G  PD+   N+LI+  C
Sbjct: 136 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 195

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    A  VL R+      P+ VT+N ++  LC  G++ +A  +  +     C P+V+
Sbjct: 196 KSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 252

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+  LI   C+      A+KL +EM N+     KPDVVTYN +I+G+CK+G +D+A + L
Sbjct: 253 TYTILIEATCKESGVGQAMKLLDEMRNKGS---KPDVVTYNVLINGICKEGRLDEAIKFL 309

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M      PNVIT+N ++   C    W +A+ L  +M+  G  P VVTFN +IN+ C+ 
Sbjct: 310 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 369

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G + +   +LE M   G  P++++YN L+ GFC   ++ RA E    MVS+GC  D+ +Y
Sbjct: 370 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 429

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N L+ A CKD KV+ AV +  ++ S+   P +ITYNT++ GL +VG    A+KL+D+M+ 
Sbjct: 430 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 489

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + PD  T+++ + GL + G V EA++ F  +          TYN ++ G         
Sbjct: 490 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG--------- 540

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
                                     LCK  Q D+A D L  M +K C P+E T+  L+ 
Sbjct: 541 --------------------------LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 574

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLV 571
           G        + + LL+++ +  LV
Sbjct: 575 GIAYEGLAKEALDLLNELCSRGLV 598



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 204/404 (50%), Gaps = 3/404 (0%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           SG   S E       + +M  +P + ++  +L  L  + +    + +  R      +PD+
Sbjct: 192 SGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 251

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
               +LI   CK      A  +L  +      P+ VT+N LING+C EGR+ EA +    
Sbjct: 252 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 311

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +  + C PNV+T N ++  +C T   + A KL  +M+ +    C P VVT+N +I+ LC+
Sbjct: 312 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG---CSPSVVTFNILINFLCR 368

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G + +A ++L +M      PN ++YN L+ GFC       A      M+  G  PD+VT
Sbjct: 369 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 428

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N ++   CKDGK+D    +L  +  +G +P  +TYN+++DG   VG+  RA +L   M 
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KG + D+ +Y+ L++   ++ KV++A+  + ++    IRP+ ITYN+++ GL +     
Sbjct: 489 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 548

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            A+  +  M      P   T+   I+G+   G   EA+ +   +
Sbjct: 549 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 592



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 209/398 (52%), Gaps = 9/398 (2%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
             K  E MV   G I  PD++   S+I G C+ G   KA  ++  ++     P+VITYN 
Sbjct: 133 GFKFLESMVYR-GDI--PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 189

Query: 265 LICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           LI G+C   +   A    ++++D   V PDVVT+N ++   C  GK+ +   +L+  +Q+
Sbjct: 190 LISGYCKSGEIDNA----LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 245

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
              PD +TY  L++  C    + +A +L   M +KG + DV +YN+LIN  CK+ ++++A
Sbjct: 246 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 305

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           +     M S   +P+VIT+N +L  +   G   DA KL+  M      P   TF   I+ 
Sbjct: 306 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 365

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC+ G +  A+ + + +    C     +YN L++G CK  ++  A +    +  +G  PD
Sbjct: 366 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 425

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +VT +T++  LCK+G++D A ++L  + +K C P  +T+ T++ G  +  K  + + LL 
Sbjct: 426 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 485

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +M  + L   D+   S +V  LS++ K  E +  F  L
Sbjct: 486 EMRRKGL-KPDIITYSSLVSGLSREGKVDEAIKFFHDL 522



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 105/193 (54%), Gaps = 3/193 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ + D M+     P + ++  LLT L K+ + D  V +  +L+S G  P L   N +
Sbjct: 408 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 467

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K+G T  A  +L  + R    P+ +T++ L++GL  EG++ EA + F  L     
Sbjct: 468 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGI 527

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +T+N+++ GLC++R T  A+     M+++    CKP   TY  +I+G+  +G   +
Sbjct: 528 RPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR---CKPTEATYTILIEGIAYEGLAKE 584

Query: 243 AKELLLQMKDRNI 255
           A +LL ++  R +
Sbjct: 585 ALDLLNELCSRGL 597


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 152/436 (34%), Positives = 245/436 (56%), Gaps = 3/436 (0%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G  P +   N ++  L    + S A   L  +LR    PN  T+N L+  LCA GR+ EA
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             +   +    C PN VT+NTL+   CR      A ++   M  E  A  KP++VT+NS+
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA--KPNLVTFNSM 229

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ++GLCK G ++ A+++  +M    + P+V++YN+L+ G+C V    E+  +F EM   G+
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PDVVTF ++I+  CK G +++   L+  M +RG+  + VT+ +L+DGFC  G +  A  
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
               M   G +  V  YN LIN  CK  +++ A  L REM ++R++P V+TY+T++SG  
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           +VGNL  A +L  KM    V+PD+ T+++ I GLC+   + +A ++F+ +     +    
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  LI+G CK G ++ A  L   +  KG +PDVVT S +I+ L K  +  +A+ LL  +
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 531 EAKNCVPSEVTFCTLL 546
             ++ VP  + +  L+
Sbjct: 530 YHEDPVPDNIKYDALM 545



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 254/505 (50%), Gaps = 19/505 (3%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A  F   M++   +P + ++ IL+  L    + +  V +   +   G  P+    N L+ 
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 125 CLCKMGITSGAFVVLGRILRSC-FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             C+ G   GA  V+  +       PN VTFN ++NGLC  GR+  A ++F ++      
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA 255

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VV++NTL++G C+      +L +F EM    G +  PDVVT+ S+I   CK G +++A
Sbjct: 256 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLV--PDVVTFTSLIHATCKAGNLEQA 312

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L+ QM++R +  N +T+ +LI GFC      +A     EM   G+QP VV +NA+IN 
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+MD    L+  M  + V PD VTY++++ G+C VG +  A +L   M+ KG   D
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y+ LI   C+++++ DA  L+  ML   ++P   TY TL+ G  + GN+  AL L D
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV---------------FQAIRNCKCELR 468
           +M    V+PD  T++  I+GL K+    EA ++               + A+  C  +  
Sbjct: 493 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAE 552

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
            ++   L+ G C  G +K A K++  +  +    D    S +IH  C+ G + KA     
Sbjct: 553 FKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHK 612

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNN 553
            M      P+  +  +L+RG  +  
Sbjct: 613 QMLRSGFSPNSTSTISLVRGLFEEG 637



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 259/486 (53%), Gaps = 23/486 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYD---TVVSLFKRLNSNGLFPDLFVL 119
            EAV     M     +P   ++  L+    +  + D    VVSL +        P+L   
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--EEGNAKPNLVTF 226

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N ++N LCK G   GA  V   ++R    P+ V++N L++G C  G + E+  +F ++  
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+VVTF +LI+  C+  N   A+ L  +M  E G   + + VT+ ++IDG CK GF
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM-RERG--LRMNEVTFTALIDGFCKKGF 343

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D A   + +M+   I P+V+ YN+LI G+C +     A+ L  EM    V+PDVVT++ 
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  CK G +D   +L + M+++GV PD +TY+SL+ G C   R++ A ELF +M+  G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + D ++Y  LI+ +CK+  VE A+ L+ EM+ + + P V+TY+ L++GL +     +A 
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 420 KLIDKMQLNDVVPDSFTF---------------ATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           +L+ K+   D VPD+  +                  + G C  G + EA +V+Q++ +  
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +L    Y+ LI+G C+ G ++ A     ++   G  P+  +  +++  L +EG + +A+
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643

Query: 525 DLLLDM 530
           + + D+
Sbjct: 644 NAIQDL 649



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/426 (32%), Positives = 226/426 (53%), Gaps = 5/426 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           + P+   +N ++  L ++  +  A R    +      PNV T+N L+  LC       A+
Sbjct: 114 YAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR-NINPNVITYNSL 265
            +  +M    GA C P+ VTYN+++   C+ G +D A+ ++  M++  N  PN++T+NS+
Sbjct: 173 GVVGDMR---GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSM 229

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + G C     + A+ +F EM+  G+ PDVV++N +++  CK G + +   +   M QRG+
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD VT+ SL+   C  G + +A  L   M  +G R +  ++  LI+  CK   ++DA+ 
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
              EM    I+PSV+ YN L++G  ++G +  A +LI +M+   V PD  T++T I G C
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G +  A Q+ Q +          TY+ LI GLC+  RL  AC+LF  +   G  PD  
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T +T+I   CKEG ++KA  L  +M  K  +P  VT+  L+ G  ++ +  +   LL K+
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 566 AAEKLV 571
             E  V
Sbjct: 530 YHEDPV 535



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 224/412 (54%), Gaps = 6/412 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V  +N ++  L  +  +L + + F   +   G    P+V TYN ++  LC  G +++A
Sbjct: 116 PSVPAYNAVL--LALSDASLPSARRFLSSMLRHGV--APNVYTYNILVRALCARGRLEEA 171

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMIN 302
             ++  M+     PN +TYN+L+  FC   +   A+ +   M + G  +P++VTFN+M+N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+M+   ++ + M++ G+ PD V+YN+L+ G+C VG +  +  +F  M  +G   
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV ++  LI+A CK   +E AV L  +M    +R + +T+  L+ G  + G L DAL  +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+   + P    +   I+G CK G +  A ++ + +   + +  + TY+ +I+G CK+
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G L +A +L  ++  KG +PD +T S++I  LC+E +++ A +L  +M      P E T+
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            TL+ G  +     K +  LH     K V+ D+   S +++ LSK  + +E 
Sbjct: 472 TTLIDGHCKEGNVEKALS-LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 522



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 205/423 (48%), Gaps = 20/423 (4%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +     V  FD M++   +P + S+  LL+   K       +++F  +   GL PD
Sbjct: 235 KAGRMEGARKV--FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI+  CK G    A  ++ ++       N VTF  LI+G C +G + +A    +
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P+VV +N LING C+     +A +L  EM  +     KPDVVTY++II G C
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR---VKPDVVTYSTIISGYC 409

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G +D A +L  +M  + + P+ ITY+SLI G C      +A  LF  M+  GVQPD  
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+ +CK+G ++K   L + MI++GV PD VTY+ L++G     R   A  L   +
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 356 VSKGCRHDVYSYN---------------ILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             +    D   Y+                L+   C    +++A  +Y+ ML    +    
Sbjct: 530 YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGS 589

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y+ L+ G  + GN+  AL    +M  +   P+S +  + + GL + G V+EA    Q +
Sbjct: 590 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649

Query: 461 RNC 463
             C
Sbjct: 650 LTC 652



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 171/360 (47%), Gaps = 20/360 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+   + M K    P +  +  L+    K  + D    L + + +  + PD+   + +
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK+G    AF +  ++L+    P+ +T++ LI GLC E R+ +A  LF+ +     
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  T+ TLI+G C+  N   AL L +EM+ + G +  PDVVTY+ +I+GL K     +
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK-GVL--PDVVTYSVLINGLSKSARTKE 521

Query: 243 AKELLLQMKDRNINPNVITYNSLIC---------------GFCCVDDWKEAKCLFIEMMD 287
           A  LL ++   +  P+ I Y++L+                GFC     KEA  ++  M+D
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
              + D   ++ +I+ +C+ G + K     + M++ G +P++ +  SL+ G    G +  
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 641

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A      +++     D  +   LI+ N K+    D      E+      PSV  +N +++
Sbjct: 642 ADNAIQDLLTCCPLADAEASKALIDLNRKEGM--DYFQAQGEIWYSESSPSVEYWNYMMT 699


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 152/466 (32%), Positives = 257/466 (55%), Gaps = 50/466 (10%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  F+ ++   P+     F  +L  L K+K Y TV+SL +++   G+ P+    N+LIN
Sbjct: 52  AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILIN 111

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
           C C++G+   AF VL +IL+  + P+ +T N  I G C +G+I +A     KL       
Sbjct: 112 CFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 171

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + V++ TLINGLC+   T  AL+L   +    G + + + V YN++IDG+ KD  V+ A 
Sbjct: 172 DQVSYGTLINGLCKVGETRAALQLLRRVD---GKLVQLNAVMYNTVIDGMSKDKHVNDAF 228

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  +M  + I+P+V+TY++LI GF  V   K+A  LF +M+   ++PDV TFN +++  
Sbjct: 229 DLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 288

Query: 305 CKDGKMDKVNRLLE-----------------------------------LMIQRGVNPDT 329
           CK+G++ K   +L+                                   +M+++G+ P+ 
Sbjct: 289 CKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNV 348

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTY SLMDG+CLV ++++A+++F +M  +G   +V+SYNI+IN  CK +KV+ A+ L+ E
Sbjct: 349 VTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIE 408

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M  + I P V+TYN+L+ GL + G +  A +L+++M      P+  T+ + ++ L     
Sbjct: 409 MHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL----- 463

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
                     +++   +  + T   LI GLC+ G+L+ A K+F  L
Sbjct: 464 -------LTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDL 502



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 220/430 (51%), Gaps = 3/430 (0%)

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
           GA  +   +L    T     FN ++  L           L +++     +PN VTFN LI
Sbjct: 51  GAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILI 110

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           N  C+      A  +  +++ + G   +PD++T N+ I G C  G + +A     ++   
Sbjct: 111 NCFCQLGLIPFAFSVLAKIL-KMGY--EPDIITLNTFIKGFCLKGQIHQALNFHDKLVAL 167

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
             + + ++Y +LI G C V + + A  L   +    VQ + V +N +I+   KD  ++  
Sbjct: 168 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDA 227

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L   M+ + ++PD VTY++L+ GF +VG++  A +LF  M+ +  + DVY++NIL++ 
Sbjct: 228 FDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 287

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK+ +++ A  +   M+ + I+P+V T+NTL+ G  +   + +   +   M    + P+
Sbjct: 288 FCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPN 347

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+ + +DG C    V +A ++F  +        + +YN +ING CK+ ++  A KLF 
Sbjct: 348 VVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFI 407

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            + HK  IPDVVT +++I  LCK G++  A  L+ +M  +   P+ +T+ ++L   +   
Sbjct: 408 EMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKL 467

Query: 554 KKSKVVVLLH 563
           K   +   +H
Sbjct: 468 KDQGIQPNMH 477



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 187/364 (51%), Gaps = 1/364 (0%)

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           +N I+  L K         L  QM+   INPN +T+N LI  FC +     A  +  +++
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G +PD++T N  I   C  G++ +     + ++  G + D V+Y +L++G C VG   
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A +L   +  K  + +   YN +I+   KD+ V DA  LY EM+++RI P V+TY+ L+
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            G F VG L DA+ L +KM L ++ PD +TF   +DG CK G + +A  V   +     +
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + T+N L++G CK  ++K    +F  +  +G  P+VVT  +++   C   Q++KA  +
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKI 370

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
              M  +    +  ++  ++ GF +  K  K + L  +M   K ++ D+   + ++D L 
Sbjct: 371 FNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEM-HHKHIIPDVVTYNSLIDGLC 429

Query: 587 KDKK 590
           K  K
Sbjct: 430 KSGK 433



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 202/377 (53%), Gaps = 3/377 (0%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FN ++  L ++++    L L ++M  EF  I  P+ VT+N +I+  C+ G +  A  +L 
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQM--EFEGI-NPNFVTFNILINCFCQLGLIPFAFSVLA 127

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           ++      P++IT N+ I GFC      +A     +++  G   D V++  +IN  CK G
Sbjct: 128 KILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVG 187

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +     +LL  +  + V  + V YN+++DG      ++ A +L+  MV+K    DV +Y+
Sbjct: 188 ETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYS 247

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI       K++DA+ L+ +M+ E I+P V T+N L+ G  + G L  A  ++D M + 
Sbjct: 248 ALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQ 307

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
           D+ P+  TF T +DG CK+  + E   VF  +     +  + TY  L++G C + ++  A
Sbjct: 308 DIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKA 367

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            K+F+ +  +G   +V + + MI+  CK  ++DKA  L ++M  K+ +P  VT+ +L+ G
Sbjct: 368 KKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDG 427

Query: 549 FVQNNKKSKVVVLLHKM 565
             ++ K S    L+++M
Sbjct: 428 LCKSGKISYAFQLVNEM 444



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 190/363 (52%), Gaps = 15/363 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ F D ++ +       S+  L+  L K  +    + L +R++   +  +  + N +
Sbjct: 155 HQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTV 214

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ + K    + AF +   ++    +P+ VT++ LI G    G++ +A  LF K+ +   
Sbjct: 215 IDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENI 274

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V TFN L++G C+      A  + + M+ +     KP+V T+N+++DG CKD  + +
Sbjct: 275 KPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQ---DIKPNVSTFNTLVDGFCKDRKMKE 331

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            K +   M  + I PNV+TY SL+ G+C V    +AK +F  M   GV  +V ++N MIN
Sbjct: 332 GKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMIN 391

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK  K+DK  +L   M  + + PD VTYNSL+DG C  G+IS A +L   M  +G   
Sbjct: 392 GFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPP 451

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++ +YN ++NA            L  ++  + I+P++ T   L+ GL Q G L  A K+ 
Sbjct: 452 NIITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVF 499

Query: 423 DKM 425
           + +
Sbjct: 500 EDL 502



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/208 (21%), Positives = 97/208 (46%), Gaps = 2/208 (0%)

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           ++ + I Y+++ S  F   ++  A+ L + +   +    +F F   +  L K+      +
Sbjct: 30  LQKNFIPYSSI-STTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            + Q +          T+N LIN  C++G +  A  +  ++   G  PD++T +T I   
Sbjct: 89  SLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGF 148

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C +GQ+ +A +    + A      +V++ TL+ G  +  +    + LL ++   KLV  +
Sbjct: 149 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDG-KLVQLN 207

Query: 575 LSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             + + V+D +SKDK   +  + +  ++
Sbjct: 208 AVMYNTVIDGMSKDKHVNDAFDLYSEMV 235


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 173/543 (31%), Positives = 284/543 (52%), Gaps = 54/543 (9%)

Query: 13  ASKAGYRCNFWCSFGRPPNPKTDLS--------SHHFKDGTSIAKFLNDRHKSGNITSNE 64
           +S  G+    +    R  NP+T LS         HH+++     +  N+ H    I  ++
Sbjct: 11  SSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRE-----RLRNELH---CIKFDD 62

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A   F  M++ +P P +  FT +LT++AK  ++D V+ L+ ++ + G+  DL+   +LI+
Sbjct: 63  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
           C C+    S A  +LG++++  F P+                                  
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPS---------------------------------- 148

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
            +VT  +L+NG C+      A+ L + M + FG +  P+VV YN++I+GLCK+  ++ A 
Sbjct: 149 -IVTLGSLLNGFCQGNRFQEAVSLVDSM-DGFGFV--PNVVIYNTVINGLCKNRDLNNAL 204

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E+   M+ + I  + +TYN+LI G      W +A  L  +M+   + P+V+ F A+I+  
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K+G + +   L + MI+R V P+  TYNSL++GFC+ G +  A+ +F  MVSKGC  DV
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN LI   CK ++VED + L+ EM  + +     TYNTL+ G  Q G L  A K+ ++
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    V PD  T+   +D LC NG + +A+ + + ++  + ++ I TYN +I GLC+  +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           LK A  LF  L  KG  PD +   TMI  LC++G   +A+ L   M+    +PSE  +  
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504

Query: 545 LLR 547
            LR
Sbjct: 505 TLR 507



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 220/440 (50%), Gaps = 3/440 (0%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           AF +   +L+S   P+ V F  ++  +    +      L+ K+       ++ +F  LI+
Sbjct: 63  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             CR     +AL L  +M+ + G   +P +VT  S+++G C+     +A  L+  M    
Sbjct: 123 CFCRCSRLSLALALLGKMM-KLGF--RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PNV+ YN++I G C   D   A  +F  M   G++ D VT+N +I+     G+     
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           RLL  M++R ++P+ + + +L+D F   G +  AR L+  M+ +    +V++YN LIN  
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C    + DA  ++  M+S+   P V+TYNTL++G  +   + D +KL  +M    +V D+
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           FT+ T I G C+ G +  A +VF  + +C     I TYN L++ LC  G+++ A  +   
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           LQ      D++T + +I  LC+  ++ +A  L   +  K   P  + + T++ G  +   
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479

Query: 555 KSKVVVLLHKMAAEKLVVSD 574
           + +   L  +M  +  + S+
Sbjct: 480 QREADKLCRRMKEDGFMPSE 499



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 203/408 (49%), Gaps = 6/408 (1%)

Query: 198 RTRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           R RN L  +K F++  + F  + +    P +V +  ++  + K    D    L  +M++ 
Sbjct: 50  RLRNELHCIK-FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL 108

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I+ ++ ++  LI  FC       A  L  +MM  G +P +VT  +++N  C+  +  + 
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L++ M   G  P+ V YN++++G C    ++ A E+F  M  KG R D  +YN LI+ 
Sbjct: 169 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
                +  DA  L R+M+  +I P+VI +  L+    + GNL +A  L  +M    VVP+
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            FT+ + I+G C +G + +A  +F  + +  C   + TYN LI G CK  R++   KLF 
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            + ++G + D  T +T+IH  C+ G+++ A  +   M      P  VT+  LL     N 
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           K  K +V++  +   ++ V D+   + ++  L +  K +E    FR L
Sbjct: 409 KIEKALVMVEDLQKSEMDV-DIITYNIIIQGLCRTDKLKEAWCLFRSL 455


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 170/541 (31%), Positives = 274/541 (50%), Gaps = 46/541 (8%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTI--LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           A+ FF       P    T+F+   LL +L + K++     LF+        PD+   N++
Sbjct: 59  ALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIV 118

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C  G    A  +L  +  + F P+  T   +I  +   G +  A      L    C
Sbjct: 119 ISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGC 175

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           DPNVVT+  LI    R +    A+KL EEM  E G  C P++VTYN ++D LCK   V  
Sbjct: 176 DPNVVTYTALIAAFARAKKLEEAMKLLEEM-RERG--CPPNLVTYNVLVDALCKLSMVGA 232

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++++ +M +    PNV+T+NSL+ GFC   +  +A+ L   M+  G++P+VVT++A+I+
Sbjct: 233 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 292

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK  K  +   +LE M  RGV PD  TY++L+ G C   +I  A ++   M   GC  
Sbjct: 293 GLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 352

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV  Y+ +I+A CK  K+ +A    +EM  +R  P V+TYNT++ GL ++G + +A  ++
Sbjct: 353 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 412

Query: 423 DKMQ-----LNDVV-------------------------------PDSFTFATYIDGLCK 446
           ++MQ     L DVV                               PD  T+ T IDGLCK
Sbjct: 413 EQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 472

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G + EA  + Q ++   C   + TY  LI+GLCK  ++  A ++   +++ G  P++VT
Sbjct: 473 CGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 532

Query: 507 CSTMIHWLCKEGQMDKANDLLLDME--AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
            +TM++ LC  G++ +A  L+  M+     C P   T+ T++   + ++   +   LL +
Sbjct: 533 YNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 592

Query: 565 M 565
           M
Sbjct: 593 M 593



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 233/429 (54%), Gaps = 35/429 (8%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
            D +  M   P + ++T L+   A+ K+ +  + L + +   G  P+L   N+L++ LCK
Sbjct: 167 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
           + +   A  V+ +++   F PN +TFN L++G C  G + +A +L   +      PNVVT
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNE--------------------------------F 216
           ++ LI+GLC+++  L A ++ EEM                                    
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
           G+ C PDVV Y+SII   CK G + +A++ L +M+ +  +P+V+TYN++I G C +    
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 277 EAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           EA+ +  +M ++G V PDVVT++ +IN  CK   + +  +LL+ M + G NPD VTY ++
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +DG C  GR+  A  L   M   GC  +V +Y  LI+  CK +KV++A  +  EM +   
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 526

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQ--LNDVVPDSFTFATYIDGLCKNGFVLEA 453
            P+++TYNT+++GL   G + +A +L+ +M+    +  PD+ T+ T ++ L  +  V EA
Sbjct: 527 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 586

Query: 454 VQVFQAIRN 462
            Q+ + +++
Sbjct: 587 EQLLEQMKS 595



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 189/366 (51%), Gaps = 11/366 (3%)

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           ++NS++  L +     +A +L       +  P+V +YN +I GFC   D   A  L  EM
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 286 MDNGVQPDVVT----FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              G  PD  T      AM N    DG MD +  +       G +P+ VTY +L+  F  
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM-------GCDPNVVTYTALIAAFAR 191

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             ++  A +L   M  +GC  ++ +YN+L++A CK   V  A  + ++M+     P+V+T
Sbjct: 192 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +N+L+ G  + GN+ DA KL+  M    + P+  T++  IDGLCK+   LEA +V + ++
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                    TY+ LI+GLCK  +++ A ++  R+   G  PDVV  S++IH  CK G++ 
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 371

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A   L +M  +   P  VT+ T++ G  +  K ++  V+L +M     V+ D+   S V
Sbjct: 372 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTV 431

Query: 582 VDLLSK 587
           ++ L K
Sbjct: 432 INGLCK 437



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 4/276 (1%)

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD  +YN ++ GFC  G +  A EL   M S G   D +++  +I A      ++ A+ 
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD 168

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
             R M  +   P+V+TY  L++   +   L +A+KL+++M+     P+  T+   +D LC
Sbjct: 169 HLRSMGCD---PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 225

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K   V  A  V + +        + T+N L++G CK G +  A KL   +  KG  P+VV
Sbjct: 226 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T S +I  LCK  +  +A ++L +M+ +   P   T+  L+ G  + +K  +   +L +M
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           A       D+ + S ++    K  K  E     + +
Sbjct: 346 AGSG-CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 380


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/504 (31%), Positives = 255/504 (50%), Gaps = 41/504 (8%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F + M+     P +   T L+    +  +      + + L  +G  PD+   N+LI+  C
Sbjct: 79  FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 138

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    A  VL R+      P+ VT+N ++  LC  G++ +A  +  +     C P+V+
Sbjct: 139 KSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 195

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+  LI   C+      A+KL +EM N+     KPDVVTYN +I+G+CK+G +D+A + L
Sbjct: 196 TYTILIEATCKESGVGQAMKLLDEMRNKGS---KPDVVTYNVLINGICKEGRLDEAIKFL 252

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M      PNVIT+N ++   C    W +A+ L  +M+  G  P VVTFN +IN+ C+ 
Sbjct: 253 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 312

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G + +   +LE M   G  P++++YN L+ GFC   ++ RA E    MVS+GC  D+ +Y
Sbjct: 313 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 372

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N L+ A CKD KV+ AV +  ++ S+   P +ITYNT++ GL +VG    A+KL+D+M+ 
Sbjct: 373 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 432

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + PD  T+++ + GL + G V EA++ F  +          TYN ++ G         
Sbjct: 433 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG--------- 483

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
                                     LCK  Q D+A D L  M +K C P+E T+  L+ 
Sbjct: 484 --------------------------LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 517

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLV 571
           G        + + LL+++ +  LV
Sbjct: 518 GIAYEGLAKEALDLLNELCSRGLV 541



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 204/404 (50%), Gaps = 3/404 (0%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           SG   S E       + +M  +P + ++  +L  L  + +    + +  R      +PD+
Sbjct: 135 SGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 194

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
               +LI   CK      A  +L  +      P+ VT+N LING+C EGR+ EA +    
Sbjct: 195 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 254

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +  + C PNV+T N ++  +C T   + A KL  +M+ +    C P VVT+N +I+ LC+
Sbjct: 255 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG---CSPSVVTFNILINFLCR 311

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G + +A ++L +M      PN ++YN L+ GFC       A      M+  G  PD+VT
Sbjct: 312 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 371

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N ++   CKDGK+D    +L  +  +G +P  +TYN+++DG   VG+  RA +L   M 
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 431

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KG + D+ +Y+ L++   ++ KV++A+  + ++    IRP+ ITYN+++ GL +     
Sbjct: 432 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 491

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            A+  +  M      P   T+   I+G+   G   EA+ +   +
Sbjct: 492 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 535



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 209/398 (52%), Gaps = 9/398 (2%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
             K  E MV   G I  PD++   S+I G C+ G   KA  ++  ++     P+VITYN 
Sbjct: 76  GFKFLESMVYR-GDI--PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 132

Query: 265 LICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           LI G+C   +   A    ++++D   V PDVVT+N ++   C  GK+ +   +L+  +Q+
Sbjct: 133 LISGYCKSGEIDNA----LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 188

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
              PD +TY  L++  C    + +A +L   M +KG + DV +YN+LIN  CK+ ++++A
Sbjct: 189 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 248

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           +     M S   +P+VIT+N +L  +   G   DA KL+  M      P   TF   I+ 
Sbjct: 249 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 308

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC+ G +  A+ + + +    C     +YN L++G CK  ++  A +    +  +G  PD
Sbjct: 309 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 368

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +VT +T++  LCK+G++D A ++L  + +K C P  +T+ T++ G  +  K  + + LL 
Sbjct: 369 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 428

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +M  + L   D+   S +V  LS++ K  E +  F  L
Sbjct: 429 EMRRKGL-KPDIITYSSLVSGLSREGKVDEAIKFFHDL 465



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 105/193 (54%), Gaps = 3/193 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ + D M+     P + ++  LLT L K+ + D  V +  +L+S G  P L   N +
Sbjct: 351 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 410

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K+G T  A  +L  + R    P+ +T++ L++GL  EG++ EA + F  L     
Sbjct: 411 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGI 470

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +T+N+++ GLC++R T  A+     M+++    CKP   TY  +I+G+  +G   +
Sbjct: 471 RPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR---CKPTEATYTILIEGIAYEGLAKE 527

Query: 243 AKELLLQMKDRNI 255
           A +LL ++  R +
Sbjct: 528 ALDLLNELCSRGL 540


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 168/551 (30%), Positives = 271/551 (49%), Gaps = 35/551 (6%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI     P + ++T ++  L K + +D    +F+++  NG  P+ +  N LI+    +G 
Sbjct: 225 MIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGK 284

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
                 +L  +      P+  T+  L+N LC  GR  EA   F  +      P V T+  
Sbjct: 285 WKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGI 344

Query: 192 LINGLCRTRNTLVALKLFEEMVNE-------------FGAICK----------------- 221
           LI+G   T+  L  +  F +++ E             F A  K                 
Sbjct: 345 LIHGYA-TKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQH 403

Query: 222 ---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
              P+VV Y ++ID LCK G VD A+    QM +  + PN++ +NSL+ G C VD W+ A
Sbjct: 404 GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERA 463

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           + L  EM+D G+ P+ V FN +I   C  G++ +  RL++LM   GV PD  +Y  L+ G
Sbjct: 464 EELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISG 523

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +CL GR   A ++F  MVS G      +YN L++  C   +++DA CL+REML + + P 
Sbjct: 524 YCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPG 583

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           V+TYNT+L GLFQ     +A +L   M  +    D +T+   ++GLCK+  V EA ++FQ
Sbjct: 584 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQ 643

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
           ++ +   +L I T+  +I  L K GR + A  LF  +   G +P+VVT   +   L +EG
Sbjct: 644 SLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEG 703

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +++ + L   ME     P+      L+R  +     S+    L K+      V + S +
Sbjct: 704 SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSV-EASTT 762

Query: 579 SKVVDLLSKDK 589
           S ++ + + D+
Sbjct: 763 SLLMSIFTSDE 773



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/591 (27%), Positives = 281/591 (47%), Gaps = 43/591 (7%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK---QYDTVVS 102
            + + + +R +S ++  ++A+  FD ++       + +F  LLT +++ +     +  VS
Sbjct: 14  ELERIIAERARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVS 73

Query: 103 LFKRLN---SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
            F R+    S+ + P+L   ++LI   C+MG     F   G IL++ +  + +  N L+ 
Sbjct: 74  HFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLK 133

Query: 160 GLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
           GLC   R+ EA   L +++    C P+ V++  L+ GLC  +    AL+L   M ++ G 
Sbjct: 134 GLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGR 193

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
            C P+VV+Y+ +I+G   +G VDK   L L+M DR I P+V+TY ++I G C    +  A
Sbjct: 194 RCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRA 253

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           + +F +M+DNG +P+  T+N +I+     GK  +V ++LE M  RG+ PD  TY SL++ 
Sbjct: 254 EGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNY 313

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C  GR   AR  F SM+ KG +  V +Y ILI+       + +       M+   + P 
Sbjct: 314 LCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPD 373

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              +N   S   + G +  A+ + +KM+ + + P+   +   ID LCK G V +A   F 
Sbjct: 374 HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFN 433

Query: 459 AIRNCKCELRIETYNCLING-----------------------------------LCKMG 483
            + N      I  +N L+ G                                   LC +G
Sbjct: 434 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 493

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+    +L   ++H G  PD  + + +I   C  G+ D+A  +   M +    P+EVT+ 
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYN 553

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           TLL G+   ++      L  +M   K V   +   + ++  L + K++ E 
Sbjct: 554 TLLHGYCSASRIDDAYCLFREM-LRKGVTPGVVTYNTILHGLFQTKRFSEA 603



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 232/463 (50%), Gaps = 3/463 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA +FFD MI+    P ++++ IL+   A       + S    +  NGL PD  + N+  
Sbjct: 322 EARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFF 381

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +   K G+   A  +  ++ +   +PN V +  LI+ LC  GR+ +A   F ++      
Sbjct: 382 SAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 441

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+V FN+L+ GLC       A +L  EM+++   IC P+ V +N++I  LC  G V + 
Sbjct: 442 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ--GIC-PNAVFFNTLICNLCNVGRVMEG 498

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           + L+  M+   + P+  +Y  LI G+C      EA+ +F  M+  G+ P  VT+N +++ 
Sbjct: 499 RRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHG 558

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C   ++D    L   M+++GV P  VTYN+++ G     R S A+EL+++M++ G + D
Sbjct: 559 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 618

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           +Y+YNI++N  CK   V++A  +++ + S+ ++ ++IT+  ++  L + G   DA+ L  
Sbjct: 619 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 678

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            +  N +VP+  T+    + L + G + E   +F A+         +  N L+  L   G
Sbjct: 679 AIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 738

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
            +  A     +L  +    +  T S ++     +     A  L
Sbjct: 739 DISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/531 (25%), Positives = 235/531 (44%), Gaps = 38/531 (7%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  MI     P   ++  L+       ++  VV + + +++ GL PD +    L+N LCK
Sbjct: 257 FQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCK 316

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME------------------- 169
            G    A      ++R    P   T+  LI+G   +G + E                   
Sbjct: 317 NGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHI 376

Query: 170 ----------------AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
                           A  +F K+      PNVV +  LI+ LC+      A   F +M+
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436

Query: 214 NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
           NE      P++V +NS++ GLC     ++A+EL+ +M D+ I PN + +N+LIC  C V 
Sbjct: 437 NEG---VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 493

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
              E + L   M   GV+PD  ++  +I+  C  G+ D+  ++ + M+  G++P  VTYN
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYN 553

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +L+ G+C   RI  A  LF  M+ KG    V +YN +++   + ++  +A  LY  M++ 
Sbjct: 554 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 613

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             +  + TYN +L+GL +   + +A K+   +    +  +  TF   I  L K G   +A
Sbjct: 614 GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDA 673

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           + +F AI        + TY  +   L + G L+    LF  ++  G  P+    + ++  
Sbjct: 674 MDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 733

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           L   G + +A   L  ++ +N      T   L+  F  +  +     L  K
Sbjct: 734 LLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSLPEK 784



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 106/240 (44%), Gaps = 11/240 (4%)

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV---GNLGDALKLIDKMQL-- 427
           A  +   ++DA+ L+ E+L      SV  +N LL+ + +         A+   ++M    
Sbjct: 23  ARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVREC 82

Query: 428 -NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            + V P+  T++  I   C+ G +      F  I      +     N L+ GLC   R+ 
Sbjct: 83  SDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVG 142

Query: 487 TACK-LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL---LDMEAKNCVPSEVTF 542
            A   L  R+   G +PD V+ + ++  LC E + ++A +LL    D   + C P+ V++
Sbjct: 143 EAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSY 202

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             ++ GF    +  K   L  +M  ++ +  D+   + V+D L K + +      F+ ++
Sbjct: 203 SIVINGFFTEGQVDKPYNLFLEM-IDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI 261


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 152/436 (34%), Positives = 245/436 (56%), Gaps = 3/436 (0%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G  P +   N ++  L    + S A   L  +LR    PN  T+N L+  LCA GR+ EA
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             +   +    C PN VT+NTL+   CR      A ++   M  E  A  KP++VT+NS+
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA--KPNLVTFNSM 229

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ++GLCK G ++ A+++  +M    + P+V++YN+L+ G+C V    E+  +F EM   G+
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PDVVTF ++I+  CK G +++   L+  M +RG+  + VT+ +L+DGFC  G +  A  
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
               M   G +  V  YN LIN  CK  +++ A  L REM ++R++P V+TY+T++SG  
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           +VGNL  A +L  KM    V+PD+ T+++ I GLC+   + +A ++F+ +     +    
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  LI+G CK G ++ A  L   +  KG +PDVVT S +I+ L K  +  +A+ LL  +
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 531 EAKNCVPSEVTFCTLL 546
             ++ VP  + +  L+
Sbjct: 530 YHEDPVPDNIKYDALM 545



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 254/505 (50%), Gaps = 19/505 (3%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A  F   M++   +P + ++ IL+  L    + +  V +   +   G  P+    N L+ 
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 125 CLCKMGITSGAFVVLGRILRSC-FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             C+ G   GA  V+  +       PN VTFN ++NGLC  GR+  A ++F ++      
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA 255

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VV++NTL++G C+      +L +F EM    G +  PDVVT+ S+I   CK G +++A
Sbjct: 256 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLV--PDVVTFTSLIHATCKAGNLEQA 312

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L+ QM++R +  N +T+ +LI GFC      +A     EM   G+QP VV +NA+IN 
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+MD    L+  M  + V PD VTY++++ G+C VG +  A +L   M+ KG   D
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y+ LI   C+++++ DA  L+  ML   ++P   TY TL+ G  + GN+  AL L D
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV---------------FQAIRNCKCELR 468
           +M    V+PD  T++  I+GL K+    EA ++               + A+  C  +  
Sbjct: 493 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAE 552

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
            ++   L+ G C  G +K A K++  +  +    D    S +IH  C+ G + KA     
Sbjct: 553 FKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHK 612

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNN 553
            M      P+  +  +L+RG  +  
Sbjct: 613 QMLRSGFSPNSTSTISLVRGLFEEG 637



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 259/486 (53%), Gaps = 23/486 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT---VVSLFKRLNSNGLFPDLFVL 119
            EAV     M     +P   ++  L+    +  + D    VVSL +        P+L   
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--EEGNAKPNLVTF 226

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N ++N LCK G   GA  V   ++R    P+ V++N L++G C  G + E+  +F ++  
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+VVTF +LI+  C+  N   A+ L  +M  E G   + + VT+ ++IDG CK GF
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM-RERG--LRMNEVTFTALIDGFCKKGF 343

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D A   + +M+   I P+V+ YN+LI G+C +     A+ L  EM    V+PDVVT++ 
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  CK G +D   +L + M+++GV PD +TY+SL+ G C   R++ A ELF +M+  G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + D ++Y  LI+ +CK+  VE A+ L+ EM+ + + P V+TY+ L++GL +     +A 
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 420 KLIDKMQLNDVVPDSFTF---------------ATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           +L+ K+   D VPD+  +                  + G C  G + EA +V+Q++ +  
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +L    Y+ LI+G C+ G ++ A     ++   G  P+  +  +++  L +EG + +A+
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643

Query: 525 DLLLDM 530
           + + D+
Sbjct: 644 NAIQDL 649



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/426 (32%), Positives = 226/426 (53%), Gaps = 5/426 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           + P+   +N ++  L ++  +  A R    +      PNV T+N L+  LC       A+
Sbjct: 114 YAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR-NINPNVITYNSL 265
            +  +M    GA C P+ VTYN+++   C+ G +D A+ ++  M++  N  PN++T+NS+
Sbjct: 173 GVVGDM---RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSM 229

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + G C     + A+ +F EM+  G+ PDVV++N +++  CK G + +   +   M QRG+
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD VT+ SL+   C  G + +A  L   M  +G R +  ++  LI+  CK   ++DA+ 
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
              EM    I+PSV+ YN L++G  ++G +  A +LI +M+   V PD  T++T I G C
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G +  A Q+ Q +          TY+ LI GLC+  RL  AC+LF  +   G  PD  
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T +T+I   CKEG ++KA  L  +M  K  +P  VT+  L+ G  ++ +  +   LL K+
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 566 AAEKLV 571
             E  V
Sbjct: 530 YHEDPV 535



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 224/411 (54%), Gaps = 6/411 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V  +N ++  L  +  +L + + F   +   G    P+V TYN ++  LC  G +++A
Sbjct: 116 PSVPAYNAVL--LALSDASLPSARRFLSSMLRHGV--APNVYTYNILVRALCARGRLEEA 171

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMIN 302
             ++  M+     PN +TYN+L+  FC   +   A+ +   M + G  +P++VTFN+M+N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+M+   ++ + M++ G+ PD V+YN+L+ G+C VG +  +  +F  M  +G   
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV ++  LI+A CK   +E AV L  +M    +R + +T+  L+ G  + G L DAL  +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+   + P    +   I+G CK G +  A ++ + +   + +  + TY+ +I+G CK+
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G L +A +L  ++  KG +PD +T S++I  LC+E +++ A +L  +M      P E T+
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            TL+ G  +     K +  LH     K V+ D+   S +++ LSK  + +E
Sbjct: 472 TTLIDGHCKEGNVEKALS-LHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 205/423 (48%), Gaps = 20/423 (4%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +     V  FD M++   +P + S+  LL+   K       +++F  +   GL PD
Sbjct: 235 KAGRMEGARKV--FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI+  CK G    A  ++ ++       N VTF  LI+G C +G + +A    +
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P+VV +N LING C+     +A +L  EM  +     KPDVVTY++II G C
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR---VKPDVVTYSTIISGYC 409

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G +D A +L  +M  + + P+ ITY+SLI G C      +A  LF  M+  GVQPD  
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+ +CK+G ++K   L + MI++GV PD VTY+ L++G     R   A  L   +
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 356 VSKGCRHDVYSYN---------------ILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             +    D   Y+                L+   C    +++A  +Y+ ML    +    
Sbjct: 530 YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGS 589

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y+ L+ G  + GN+  AL    +M  +   P+S +  + + GL + G V+EA    Q +
Sbjct: 590 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649

Query: 461 RNC 463
             C
Sbjct: 650 LTC 652



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 169/351 (48%), Gaps = 18/351 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+   + M K    P +  +  L+    K  + D    L + + +  + PD+   + +
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK+G    AF +  ++L+    P+ +T++ LI GLC E R+ +A  LF+ +     
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  T+ TLI+G C+  N   AL L +EM+ + G +  PDVVTY+ +I+GL K     +
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK-GVL--PDVVTYSVLINGLSKSARTKE 521

Query: 243 AKELLLQMKDRNINPNVITYNSLIC---------------GFCCVDDWKEAKCLFIEMMD 287
           A  LL ++   +  P+ I Y++L+                GFC     KEA  ++  M+D
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
              + D   ++ +I+ +C+ G + K     + M++ G +P++ +  SL+ G    G +  
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 641

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           A      +++     D  +   LI+ N K+  V+  + +   M  + + PS
Sbjct: 642 ADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 156/510 (30%), Positives = 259/510 (50%), Gaps = 2/510 (0%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +S + +   ++  F  +I ++  P   +F +L+            +S   ++   GL PD
Sbjct: 184 RSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPD 243

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N L+N  C+ G+   A  +L R+ +    P   T+N L++     G I +A  + +
Sbjct: 244 AVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVE 303

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +  F  +P++ T+N L  GLC+      A KL +EM  E   I  PDVVTYN+++D   
Sbjct: 304 AMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM--EQLGIVSPDVVTYNTLVDACF 361

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K      A  LL +M+++ +  +++T+N ++ G C     +EA      M + G+ PDV+
Sbjct: 362 KCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVI 421

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I+ +CK G + K   L++ M++ G+  DT T N+L+   C   R   A EL  + 
Sbjct: 422 TYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAP 481

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +G   D  SY  ++ A  K+ K E A+CL+ EM+  ++ PS+ TYNTL+ GL  +G L
Sbjct: 482 PQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKL 541

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A+  ++++    +VPD  T+   I   CK G + +A Q    +     +  + T N L
Sbjct: 542 TEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTL 601

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           +NGLC  GRL+ A KLF     KG   DV+T +T+I  LCK+  +D A     DME +  
Sbjct: 602 MNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGL 661

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            P   T+  LL    +  +  +   +LHK+
Sbjct: 662 QPDVFTYNVLLSALSEAGRSVEAQKMLHKL 691



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 232/491 (47%), Gaps = 42/491 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF-PDLFVLNLL 122
           +A    + M      P + ++ +L   L +  + D    L   +   G+  PD+   N L
Sbjct: 297 QATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTL 356

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++   K   +S A  +L  +       + VT N ++ GLC EG++ EA    + +     
Sbjct: 357 VDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGL 416

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V+T+NTLI+  C+  N   A  L +EMV    +  K D  T N+++  LCK+   ++
Sbjct: 417 TPDVITYNTLIDASCKAGNVAKAFVLMDEMVR---SGLKMDTFTLNTLLYNLCKEKRYEE 473

Query: 243 AKELLL-----------------------------------QMKDRNINPNVITYNSLIC 267
           A+ELL                                    +M  R + P++ TYN+LI 
Sbjct: 474 AEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIK 533

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G   +    EA     E+M+ G+ PD  T+N +I+  CK+G ++K  +    M++    P
Sbjct: 534 GLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKP 593

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D VT N+LM+G CL GR+ +A +LF S V KG + DV +YN LI A CKD  V+ A+  +
Sbjct: 594 DVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFF 653

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL--C 445
            +M    ++P V TYN LLS L + G   +A K++ K+  +  +   F + +    +   
Sbjct: 654 ADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAV 713

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           + G   E     +++ N + + + E+YN  I  LC  G+LK A  +   +  KG   D  
Sbjct: 714 ETGKDPEVKSDIESVGNTQGDDQ-ESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNS 772

Query: 506 TCSTMIHWLCK 516
           T  T++  L K
Sbjct: 773 TYITLMEGLIK 783



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 156/611 (25%), Positives = 264/611 (43%), Gaps = 84/611 (13%)

Query: 25  SFGRPPN--PKTDLSSHHFKDGTSIAKFLNDRHKSGNI---------TSNEAVYFFDCMI 73
           +  R P+  P+  L + H    + IA  L+  H + N+         T  +A+     M 
Sbjct: 181 ALARSPSTSPQASLDAFH----SLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQ 236

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
               SP   ++  LL    +        +L  R+   G+ P     N L++   ++G   
Sbjct: 237 GFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIK 296

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-CDPNVVTFNTL 192
            A  V+  +    F P+  T+N L  GLC  G++ EA +L  ++       P+VVT+NTL
Sbjct: 297 QATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTL 356

Query: 193 INGLCRTRNTLVALKLFEEMVNE------------FGAICK------------------- 221
           ++   + + +  AL L EEM  +               +C+                   
Sbjct: 357 VDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGL 416

Query: 222 -PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PDV+TYN++ID  CK G V KA  L+ +M    +  +  T N+L+   C    ++EA+ 
Sbjct: 417 TPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 476

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L       G  PD V++  ++    K+ K +    L + MI+R + P   TYN+L+ G  
Sbjct: 477 LLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLS 536

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
            +G+++ A +    ++  G   D  +YNI+I+A CK+  +E A   + +M+    +P V+
Sbjct: 537 TMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVV 596

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T NTL++GL   G L  A+KL +         D  T+ T I  LCK+  V  A++ F  +
Sbjct: 597 TCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADM 656

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI------------------- 501
                +  + TYN L++ L + GR   A K+ H+L   G +                   
Sbjct: 657 EVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETG 716

Query: 502 --PDV---------------VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
             P+V                + +  I  LC  GQ+ +A  +L +M  K       T+ T
Sbjct: 717 KDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYIT 776

Query: 545 LLRGFVQNNKK 555
           L+ G ++  K+
Sbjct: 777 LMEGLIKRQKR 787



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 203/431 (47%), Gaps = 12/431 (2%)

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           ++ A  P     +  ++   R R   +A +L            +P +   N+++  L + 
Sbjct: 128 HLLASFPTSALADAALSTYARLRLPHLAAQLLHSFRRR--GCVRPSLQAANAVLSALARS 185

Query: 238 GFVDKAKEL-----LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
                   L     L+ ++   ++PN  T+N L+   C      +A     +M   G+ P
Sbjct: 186 PSTSPQASLDAFHSLIALR---LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSP 242

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D VT+N ++N +C+ G + +   LL  M + G+ P   TYN+L+  +  +G I +A ++ 
Sbjct: 243 DAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVV 302

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI-RPSVITYNTLLSGLFQ 411
            +M + G   D+++YN+L    C+  KV++A  L  EM    I  P V+TYNTL+   F+
Sbjct: 303 EAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFK 362

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
                DAL L+++M+   V     T    + GLC+ G + EA+   + +        + T
Sbjct: 363 CQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVIT 422

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN LI+  CK G +  A  L   +   G   D  T +T+++ LCKE + ++A +LL    
Sbjct: 423 YNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPP 482

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
            +  VP EV++ T++  + +  K    + L  +M   KL  S +S  + ++  LS   K 
Sbjct: 483 QRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPS-ISTYNTLIKGLSTMGKL 541

Query: 592 RECLNQFRHLL 602
            E +++   L+
Sbjct: 542 TEAIDKLNELM 552



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 197/409 (48%), Gaps = 7/409 (1%)

Query: 170 AARLFKKLNVFAC-DPNVVTFNTLINGLCRTRNT--LVALKLFEEMVNEFGAICKPDVVT 226
           AA+L        C  P++   N +++ L R+ +T    +L  F  ++        P+  T
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLI---ALRLHPNHYT 211

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           +N ++   C  G +  A   L +M+   ++P+ +TYN+L+   C      EA+ L   M 
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMK 271

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G+ P   T+N +++   + G + +   ++E M   G  PD  TYN L  G C  G++ 
Sbjct: 272 KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 331

Query: 347 RARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
            A +L   M   G    DV +YN L++A  K Q+  DA+ L  EM  + ++ S++T+N +
Sbjct: 332 EAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNII 391

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + GL + G L +AL  ++ M    + PD  T+ T ID  CK G V +A  +   +     
Sbjct: 392 VKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGL 451

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           ++   T N L+  LCK  R + A +L      +G +PD V+  T++    KE + + A  
Sbjct: 452 KMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALC 511

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           L  +M  +   PS  T+ TL++G     K ++ +  L+++    LV  D
Sbjct: 512 LWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDD 560



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 205/442 (46%), Gaps = 34/442 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S++A+   + M +      + +  I++  L +  Q +  +   + +   GL PD+   N 
Sbjct: 366 SSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNT 425

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+  CK G  + AFV++  ++RS    +T T N L+  LC E R  EA  L +      
Sbjct: 426 LIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRG 485

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ V++ T++    +      AL L++EM+        P + TYN++I GL   G + 
Sbjct: 486 FVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKR---KLTPSISTYNTLIKGLSTMGKLT 542

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A + L ++ +  + P+  TYN +I  +C   D ++A     +M++N  +PDVVT N ++
Sbjct: 543 EAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLM 602

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N  C  G+++K  +L E  +++G   D +TYN+L+   C    +  A   F  M  +G +
Sbjct: 603 NGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQ 662

Query: 362 HDVYSYNILINANCKD----------QKVEDAVCLYREMLSERIRPSVITYNT-----LL 406
            DV++YN+L++A  +            K+ ++  LY       I+ SV    T     + 
Sbjct: 663 PDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVK 722

Query: 407 SGLFQVGNL-GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           S +  VGN  GD               D  ++  YI  LC  G + EA  V   +     
Sbjct: 723 SDIESVGNTQGD---------------DQESYNKYIKELCIGGQLKEAKAVLDEMMQKGM 767

Query: 466 ELRIETYNCLINGLCKMGRLKT 487
            +   TY  L+ GL K  + +T
Sbjct: 768 SVDNSTYITLMEGLIKRQKRQT 789


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 167/530 (31%), Positives = 271/530 (51%), Gaps = 54/530 (10%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  M++   SP + ++ IL+         +  +  F  +  NG  P++   N +I+  CK
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
           +     AF +L  +      PN +++N +INGLC EG++ E + + ++++     P+ VT
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FNTLING C   N   AL L  EMV        P+VVTY ++I+ +CK G +++A E L 
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNG---LSPNVVTYTTLINSMCKAGNLNRAMEFLD 367

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           QM+DR ++PN  TY +LI GF      K+A  +  EM++NG  P ++T+NA+IN +C  G
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG 427

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +M+  + LL+ MI+RG  PD V+Y++++ GFC    + +A +L V MV+KG   DV +Y+
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYS 487

Query: 369 ILINANCKDQKVEDAVCLYREMLS-------------------------------ERIR- 396
            LI   CK +++ +   L++EMLS                               E I+ 
Sbjct: 488 SLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547

Query: 397 ---PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID----------- 442
              P ++TYN L++G  +     +A +L+ K+   + VP+  T+ T ID           
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSAL 607

Query: 443 ----GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
               G C  G + EA +V +++     +L  E YN +I+G  K+G ++ A  L+  + H 
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           G  P  VT   +   L  EG+  + N  LLD   K+C  +E     +L G
Sbjct: 668 GFAPHSVTIMALAKSLYHEGKEVELNQ-LLDYTLKSCRITEAALAKVLIG 716



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 216/431 (50%), Gaps = 68/431 (15%)

Query: 184 PNVVTFNTLINGLCRTRNTL-VALKLFEEMVNE--------------------------- 215
           P V+++N +++ + RT+ ++ +A  +F+EMV                             
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLX 224

Query: 216 -FGAI----CKPDVVTYNSIID-----------------------------------GLC 235
            FG +    C P+VVTYN+IID                                   GLC
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLC 284

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           ++G + +  E+L +M  R   P+ +T+N+LI G+C V ++ +A  L  EM+ NG+ P+VV
Sbjct: 285 REGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +IN  CK G +++    L+ M  RG++P+  TY +L+DGF   G + +A ++   M
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V  G    + +YN LIN +C   ++EDA  L +EM+     P V++Y+T++SG  +   L
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             A +L  +M    + PD  T+++ I GLCK   + E   +FQ + +        TY  L
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           IN  C  G L  A +L   +  KG  PD+VT + +I+   K+ +  +A  LLL +  +  
Sbjct: 525 INAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES 584

Query: 536 VPSEVTFCTLL 546
           VP+E+T+ TL+
Sbjct: 585 VPNEITYNTLI 595



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 201/396 (50%), Gaps = 36/396 (9%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC-CVDDWKEA 278
           CK     ++ ++    +   ++KA  ++   K     P V++YN+++          K A
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           + +F EM+++GV P+V T+N +I   C  G ++        M + G  P+ VTYN+++D 
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDA 247

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED---------------- 382
           +C + +I  A +L   M  KG   ++ SYN++IN  C++ ++++                
Sbjct: 248 YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD 307

Query: 383 -------------------AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
                              A+ L+ EM+   + P+V+TY TL++ + + GNL  A++ +D
Sbjct: 308 RVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLD 367

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+   + P+  T+ T IDG  + GF+ +A Q+ + +        I TYN LING C +G
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG 427

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R++ A  L   +  +G IPDVV+ ST+I   C+  +++KA  L ++M AK   P   T+ 
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYS 487

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +L++G  +  +  +V  L  +M +  L   +++ +S
Sbjct: 488 SLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 184/374 (49%), Gaps = 25/374 (6%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K+GN+  N A+ F D M      P   ++T L+   ++         + K +  
Sbjct: 349 LINSMCKAGNL--NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           NG  P +   N LIN  C +G    A  +L  ++   F P+ V+++ +I+G C    + +
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK 466

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A +L  ++      P+V T+++LI GLC+ R       LF+EM++  G    PD VTY S
Sbjct: 467 AFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLS-LG--LPPDEVTYTS 523

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+  C +G +DKA  L  +M  +  +P+++TYN LI GF      KEAK L ++++   
Sbjct: 524 LINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEE 583

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             P+ +T+N +I+ NC                    N +  +  +LM GFC+ G ++ A 
Sbjct: 584 SVPNEITYNTLID-NCN-------------------NLEFKSALALMKGFCMKGLMNEAD 623

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            +  SM+ KG + +   YN++I+ + K   +E A  LY+EML     P  +T   L   L
Sbjct: 624 RVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSL 683

Query: 410 FQVGNLGDALKLID 423
           +  G   +  +L+D
Sbjct: 684 YHEGKEVELNQLLD 697


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 165/531 (31%), Positives = 274/531 (51%), Gaps = 4/531 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  F   M+  +  P   ++  L+   +   Q+   V +FK +  + + PD+  L++L
Sbjct: 271 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 330

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LCK G    A  V   +      P+  ++N ++NG   +G +++   LF  +     
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  TFN LI           A+ +F EM +      KPDVVTY ++I  LC+ G +D 
Sbjct: 391 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG---VKPDVVTYRTVIAALCRIGKMDD 447

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E   QM D+ + P+   YN LI GFC      +AK L  E+M+NG+  D+V F+++IN
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++     + +L +  G++PD V Y+ LMDG+CLVG++ +A  +F +MVS G   
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V  Y  L+N  CK  ++++ + L+REML   I+PS I Y+ ++ GLFQ G    A    
Sbjct: 568 NVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKF 627

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M  + +  D  T+   + GL KN    EA+ +F+ +R    ++ I T N +I+G+ + 
Sbjct: 628 HEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQT 687

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            R++ A  LF  +     +P VVT S MI  L KEG +++A D+   M+   C P+    
Sbjct: 688 RRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLL 747

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             ++R  ++ N+  +    L K+      +  L+ +  +VDL S     RE
Sbjct: 748 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT-TMLLVDLFSSKGTCRE 797



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 155/511 (30%), Positives = 270/511 (52%), Gaps = 7/511 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           SP   ++ IL+    +  + +  ++ F +L   GL  ++ + N L+   C+   T  A  
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 167

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           ++L R       P+  +++ L+  LC +G+  +A  L + +      C PNVV +NT+I+
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 227

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A  LF+EMV        PD+VTYNS++  LCK   +DKA+  L QM ++ 
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRG---IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TYN+LI G+     WKEA  +F EM  + + PDVVT + ++   CK GK+ +  
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + M  +G NPD  +YN +++G+   G +    +LF  M+  G   D Y++N+LI A 
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 404

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
                ++ A+ ++ EM    ++P V+TY T+++ L ++G + DA++  ++M    V PD 
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           + +   I G C +G +L+A ++   I N    L I  ++ +IN LCK+GR+  A  +F  
Sbjct: 465 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 524

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             + G  PD V  S ++   C  G+M+KA  +   M +    P+ V +CTL+ G+ +  +
Sbjct: 525 TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGR 584

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
             + + L  +M    +  S + L S ++D L
Sbjct: 585 IDEGLSLFREMLQRGIKPSTI-LYSIIIDGL 614



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 185/397 (46%), Gaps = 3/397 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F+ M      P + ++  ++  L +  + D  +  F ++   G+ PD +  N L
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 470

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C  G    A  ++  I+ +    + V F+ +IN LC  GR+M+A  +F        
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ V ++ L++G C       AL++F+ MV+   A  +P+VV Y ++++G CK G +D+
Sbjct: 531 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS---AGIEPNVVVYCTLVNGYCKIGRIDE 587

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              L  +M  R I P+ I Y+ +I G         AK  F EM ++G+  D+ T+N ++ 
Sbjct: 588 GLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLR 647

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+   D+   L + +    V  + +T N+++DG     R+  A++LF S+       
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVP 707

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V +Y+I+I    K+  VE+A  ++  M +    P+    N ++  L +   +  A   +
Sbjct: 708 SVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYL 767

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            K+   +   +  T    +D     G   E ++   A
Sbjct: 768 SKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPA 804


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 155/490 (31%), Positives = 264/490 (53%), Gaps = 3/490 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M +   +P    + ++L    +   + + V + + L++ G   D+   NL++
Sbjct: 177 DALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVL 236

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N +C  G    A  +L  +      P+ V++N ++ GLC   R      L +++   AC 
Sbjct: 237 NAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACP 296

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+VTFNTLI+ LCR        ++  +MV E G  C PD+  Y +IIDG+CK+G ++ A
Sbjct: 297 PNIVTFNTLISYLCRNGLFERVHEVLAQMV-EHG--CTPDIRMYATIIDGICKEGHLEVA 353

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E+L +M    + PNV+ YN+L+ G C  + W+E + L  EM D     D VTFN ++++
Sbjct: 354 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 413

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C++G +D+V  LLE M++ G  PD +TY ++++GFC  G I  A  L  SM + GC+ +
Sbjct: 414 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 473

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             SY I++   C  ++  DA  L  +M+ +    + IT+NTL++ L + G +  A++L+ 
Sbjct: 474 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 533

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M +N   PD  +++T IDGL K G   EA+++   + N         Y+ + + L + G
Sbjct: 534 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 593

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+    ++F  +Q      D V  + +I  LCK G+ ++A + L  M +  CVP+E T+ 
Sbjct: 594 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 653

Query: 544 TLLRGFVQNN 553
            L+RG     
Sbjct: 654 ILIRGLASEG 663



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 235/453 (51%), Gaps = 4/453 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN  T+  ++  LCA GRI +A  +  ++    C P    ++ ++   CR      A+++
Sbjct: 157 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 216

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            E++       C  DV   N +++ +C  G VD+A  LL  +      P+V++YN+++ G
Sbjct: 217 LEDL---HARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKG 273

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C    W   + L  EM+     P++VTFN +I+Y C++G  ++V+ +L  M++ G  PD
Sbjct: 274 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 333

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
              Y +++DG C  G +  A E+   M S G + +V  YN L+   C  ++ E+   L  
Sbjct: 334 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 393

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM  +      +T+N L+    Q G +   ++L+++M  +  +PD  T+ T I+G CK G
Sbjct: 394 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 453

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EAV + +++  C C+    +Y  ++ GLC   R   A  L  ++  +G   + +T +
Sbjct: 454 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFN 513

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I++LCK+G +++A +LL  M    C P  +++ T++ G  +  K  + + LL+ M  +
Sbjct: 514 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 573

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            +  + +  SS +   LS++ +  + +  F ++
Sbjct: 574 GMSPNTIIYSS-IASALSREGRINKVIQMFDNI 605



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 216/437 (49%), Gaps = 3/437 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA++    +      P + S+  +L  L   K++  V  L + +      P++   N L
Sbjct: 246 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 305

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC+ G+      VL +++    TP+   +  +I+G+C EG +  A  +  ++  +  
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVV +NTL+ GLC         +L  EM   F   C  D VT+N ++D  C++G VD+
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEM---FDKDCPLDDVTFNILVDFFCQNGLVDR 422

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
             ELL QM +    P+VITY ++I GFC      EA  L   M   G +P+ +++  ++ 
Sbjct: 423 VIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 482

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   +      L+  MIQ+G   + +T+N+L++  C  G + +A EL   M+  GC  
Sbjct: 483 GLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 542

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ SY+ +I+   K  K ++A+ L   M+++ + P+ I Y+++ S L + G +   +++ 
Sbjct: 543 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF 602

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D +Q   +  D+  +   I  LCK G    A++    + +  C     TY  LI GL   
Sbjct: 603 DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 662

Query: 483 GRLKTACKLFHRLQHKG 499
           G +K A ++   L  KG
Sbjct: 663 GFVKEAQEMLTELCSKG 679



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 161/341 (47%), Gaps = 3/341 (0%)

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN+++ G C+ G ++ A+ L   +    + PN  TY  ++   C      +A  +  EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G  P    ++ ++   C+ G      R+LE +  RG   D    N +++  C  G + 
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  L   + S GC  DV SYN ++   C  ++      L  EM+     P+++T+NTL+
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           S L + G      +++ +M  +   PD   +AT IDG+CK G +  A ++   + +   +
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             +  YN L+ GLC   R +   +L   +  K    D VT + ++ + C+ G +D+  +L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           L  M    C+P  +T+ T++ GF +     + V+LL  M A
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 467



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 2/135 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  ++   K+G   ++EA+   + M+    SP    ++ + + L++  + + V+ 
Sbjct: 543 DLISYSTVIDGLGKAGK--TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 600

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +    +  D  + N +I+ LCK G T  A   L  ++ S   PN  T+  LI GL 
Sbjct: 601 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLA 660

Query: 163 AEGRIMEAARLFKKL 177
           +EG + EA  +  +L
Sbjct: 661 SEGFVKEAQEMLTEL 675


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 167/530 (31%), Positives = 271/530 (51%), Gaps = 54/530 (10%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  M++   SP + ++ IL+         +  +  F  +  NG  P++   N +I+  CK
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
           +     AF +L  +      PN +++N +INGLC EG++ E + + ++++     P+ VT
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FNTLING C   N   AL L  EMV        P+VVTY ++I+ +CK G +++A E L 
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNG---LSPNVVTYTTLINSMCKAGNLNRAMEFLD 367

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           QM+DR ++PN  TY +LI GF      K+A  +  EM++NG  P ++T+NA+IN +C  G
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG 427

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +M+  + LL+ MI+RG  PD V+Y++++ GFC    + +A +L V MV+KG   DV +Y+
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYS 487

Query: 369 ILINANCKDQKVEDAVCLYREMLS-------------------------------ERIR- 396
            LI   CK +++ +   L++EMLS                               E I+ 
Sbjct: 488 SLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547

Query: 397 ---PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID----------- 442
              P ++TYN L++G  +     +A +L+ K+   + VP+  T+ T ID           
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSAL 607

Query: 443 ----GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
               G C  G + EA +V +++     +L  E YN +I+G  K+G ++ A  L+  + H 
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           G  P  VT   +   L  EG+  + N  LLD   K+C  +E     +L G
Sbjct: 668 GFAPHSVTIMALAKSLYHEGKEVELNQ-LLDYTLKSCRITEAALAKVLIG 716



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 218/401 (54%), Gaps = 4/401 (0%)

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK-DG 238
           + C  +   F+ ++    R      AL +   +   +G +  P V++YN+I+D + +   
Sbjct: 126 YQCKSSSAVFDLVVKSCARVNLINKALSIVN-LAKSYGFM--PGVLSYNAILDAVIRTKQ 182

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V  A+ +  +M +  ++PNV TYN LI GFC   + +     F EM  NG  P+VVT+N
Sbjct: 183 SVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYN 242

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I+  CK  K+ +  +LL LM  +G+NP+ ++YN +++G C  G++    E+   M  +
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
               D  ++N LIN  C       A+ L+ EM+   + P+V+TY TL++ + + GNL  A
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           ++ +D+M+   + P+  T+ T IDG  + GF+ +A Q+ + +        I TYN LING
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            C +GR++ A  L   +  +G IPDVV+ ST+I   C+  +++KA  L ++M AK   P 
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPD 482

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
             T+ +L++G  +  +  +V  L  +M +  L   +++ +S
Sbjct: 483 VATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 216/431 (50%), Gaps = 68/431 (15%)

Query: 184 PNVVTFNTLINGLCRTRNTL-VALKLFEEMVNE--------------------------- 215
           P V+++N +++ + RT+ ++ +A  +F+EMV                             
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLF 224

Query: 216 -FGAI----CKPDVVTYNSIID-----------------------------------GLC 235
            FG +    C P+VVTYN+IID                                   GLC
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLC 284

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           ++G + +  E+L +M  R   P+ +T+N+LI G+C V ++ +A  L  EM+ NG+ P+VV
Sbjct: 285 REGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +IN  CK G +++    L+ M  RG++P+  TY +L+DGF   G + +A ++   M
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V  G    + +YN LIN +C   ++EDA  L +EM+     P V++Y+T++SG  +   L
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             A +L  +M    + PD  T+++ I GLCK   + E   +FQ + +        TY  L
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           IN  C  G L  A +L   +  KG  PD+VT + +I+   K+ +  +A  LLL +  +  
Sbjct: 525 INAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES 584

Query: 536 VPSEVTFCTLL 546
           VP+E+T+ TL+
Sbjct: 585 VPNEITYNTLI 595



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 184/374 (49%), Gaps = 25/374 (6%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K+GN+  N A+ F D M      P   ++T L+   ++         + K +  
Sbjct: 349 LINSMCKAGNL--NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           NG  P +   N LIN  C +G    A  +L  ++   F P+ V+++ +I+G C    + +
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK 466

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A +L  ++      P+V T+++LI GLC+ R       LF+EM++  G    PD VTY S
Sbjct: 467 AFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLS-LG--LPPDEVTYTS 523

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+  C +G +DKA  L  +M  +  +P+++TYN LI GF      KEAK L ++++   
Sbjct: 524 LINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEE 583

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             P+ +T+N +I+ NC                    N +  +  +LM GFC+ G ++ A 
Sbjct: 584 SVPNEITYNTLID-NCN-------------------NLEFKSALALMKGFCMKGLMNEAD 623

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            +  SM+ KG + +   YN++I+ + K   +E A  LY+EML     P  +T   L   L
Sbjct: 624 RVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSL 683

Query: 410 FQVGNLGDALKLID 423
           +  G   +  +L+D
Sbjct: 684 YHEGKEVELNQLLD 697


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 155/510 (30%), Positives = 257/510 (50%), Gaps = 2/510 (0%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +S + +   ++  F  +I ++  P   +F +L+            +S    +   GL PD
Sbjct: 185 RSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPD 244

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N L+   C+ G+   A  +L R+ +    P   T+N L++     G I +A  + +
Sbjct: 245 VVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVE 304

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +  F  +P++ T+N L  GLC+      A KL +EM  E  +I  PDVVTYN+++D   
Sbjct: 305 AMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM--EHLSIVSPDVVTYNTLVDACF 362

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K      A  LL +M+D+ +  +++T+N ++ G C     +EA      M + G+ PDV+
Sbjct: 363 KYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVI 422

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I+  CK   + K   L++ M++ G+  DT T N+L+   C   R   A EL  S 
Sbjct: 423 TYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSP 482

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +G   D  SY  ++ A  K+ K E A+ L+ EM   ++ PS+ TYNTL+ GL  +G L
Sbjct: 483 PQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKL 542

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A+  ++++    +VPD  T+   I   CK G + +A Q    +     +  + T N L
Sbjct: 543 TEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTL 602

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           +NGLC  G+L+ A KLF     KG   DV+T +T+I  LCK+G +D A     DMEA+  
Sbjct: 603 MNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGL 662

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            P   T+  +L    +  +  +   +LHK+
Sbjct: 663 QPDAFTYNVVLSALSEAGRSEEAQNMLHKL 692



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 259/526 (49%), Gaps = 7/526 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSL--FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P + +   +L+ LA++       SL  F+ L +  L P+ +  NLL++  C  G  + A 
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
             L  +     +P+ VT+N L+   C +G + EA  L  ++      P   T+NTL++  
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI- 255
            R      A  + E M   FG   +PD+ TYN +  GLC+ G VD+A +L  +M+  +I 
Sbjct: 291 ARLGWIKQATNVVEAMT-AFG--FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIV 347

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           +P+V+TYN+L+          +A  L  EM D GV+  +VT N ++   C++G++++   
Sbjct: 348 SPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALG 407

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
            L++M + G+ PD +TYN+L+D +C    +++A  L   MV  G + D ++ N L+   C
Sbjct: 408 RLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLC 467

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K+++ E+A  L R        P  ++Y T+++  F+      AL L D+M    + P  +
Sbjct: 468 KEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIY 527

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+ T I GLC  G + EA+     +          TYN +I+  CK G L+ A +  +++
Sbjct: 528 TYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKM 587

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
                 PDVVTC+T+++ LC  G+++KA  L      K      +T+ TL++   ++   
Sbjct: 588 LENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDV 647

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              +     M A  L   D    + V+  LS+  +  E  N    L
Sbjct: 648 DTALHFFADMEARGL-QPDAFTYNVVLSALSEAGRSEEAQNMLHKL 692



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 228/491 (46%), Gaps = 42/491 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF-PDLFVLNLL 122
           +A    + M      P + ++ +L   L +  + D    L   +    +  PD+   N L
Sbjct: 298 QATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTL 357

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++   K   +S A  +L  +       + VT N ++ GLC EG++ EA    K +     
Sbjct: 358 VDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGL 417

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V+T+NTLI+  C+ RN   A  L +EMV    +  K D  T N+++  LCK+   ++
Sbjct: 418 APDVITYNTLIDAYCKARNVAKAFVLMDEMVR---SGLKMDTFTLNTLLYNLCKEKRYEE 474

Query: 243 AKELLL-----------------------------------QMKDRNINPNVITYNSLIC 267
           A+ELL                                    +M  R + P++ TYN+LI 
Sbjct: 475 AEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIK 534

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C +    EA     E+M  G+ PD  T+N +I+  CK+G ++K  +    M++    P
Sbjct: 535 GLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKP 594

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D VT N+LM+G CL G++ +A +LF S   KG + DV +YN LI A CKD  V+ A+  +
Sbjct: 595 DVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFF 654

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL--C 445
            +M +  ++P   TYN +LS L + G   +A  ++ K+  +  + + F++          
Sbjct: 655 ADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEV 714

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G   E     ++  N K   + E+YN  +  LC  G+LK A  +   +  KG   D  
Sbjct: 715 KTGKDPEVKSDCESGGNAKGGDQ-ESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSS 773

Query: 506 TCSTMIHWLCK 516
           T  T++  L K
Sbjct: 774 TYITLMEGLIK 784



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 175/359 (48%), Gaps = 9/359 (2%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKEL-----LLQMKDRNINPNVITYNSLICGFCCVDDW 275
           +P +   N+++  L +         L     L+ ++   ++PN  T+N L+   C     
Sbjct: 170 RPSLQAANAVLSALARSPSTSPQASLDVFRSLIALR---LHPNHYTFNLLVHTHCSKGTL 226

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            +A      M   G+ PDVVT+N ++  +C+ G + +   LL  M + G+ P   TYN+L
Sbjct: 227 ADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTL 286

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +  +  +G I +A  +  +M + G   D+++YN+L    C+  KV++A  L  EM    I
Sbjct: 287 VSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSI 346

Query: 396 -RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
             P V+TYNTL+   F+     DAL L+++M+   V     T    + GLC+ G + EA+
Sbjct: 347 VSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEAL 406

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
              + +        + TYN LI+  CK   +  A  L   +   G   D  T +T+++ L
Sbjct: 407 GRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNL 466

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           CKE + ++A +LL     +  VP EV++ T++  + + NK    + L  +M+  KL  S
Sbjct: 467 CKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPS 525



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 147/304 (48%), Gaps = 8/304 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   S+  ++    K  + +  + L+  ++   L P ++  N LI  LC +G  + A   
Sbjct: 489 PDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDK 548

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +++    P+  T+N +I+  C EG + +A +   K+      P+VVT NTL+NGLC 
Sbjct: 549 LNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCL 608

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+KLFE    +   +   DV+TYN++I  LCKDG VD A      M+ R + P+
Sbjct: 609 HGKLEKAIKLFESWAEKGKKV---DVITYNTLIQALCKDGDVDTALHFFADMEARGLQPD 665

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             TYN ++         +EA+ +  ++ ++G   +  ++  +I  + ++ K  K +  ++
Sbjct: 666 AFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSY-PLIKSSAEEVKTGK-DPEVK 723

Query: 319 LMIQRGVNP---DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
              + G N    D  +YN  +   C+ G++  A+ +   M+ KG   D  +Y  L+    
Sbjct: 724 SDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLI 783

Query: 376 KDQK 379
           K QK
Sbjct: 784 KRQK 787


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 156/504 (30%), Positives = 265/504 (52%), Gaps = 19/504 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA++ +    KM   P M +  ++L  L K  ++DT+  ++  + + G  P++     L
Sbjct: 143 EEALWVY---YKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTL 199

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C+ G    AF +   ++     P  V +  LI GLC E RI EA  +F+ +     
Sbjct: 200 IDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+NT+++G C+  +   AL+L++EM+ + G +  P+VVT+  +IDGLCK   +  
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGD-GLL--PNVVTFGILIDGLCKTDEMVS 316

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++ L+ M    + PN+  YN LI G+C   +  EA  L  E+  + + PDV T++ +I 
Sbjct: 317 ARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIK 376

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   +M++ + LL+ M ++G  P+ VTYN+L+DG+C  G + +A E+   M  KG   
Sbjct: 377 GLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP 436

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++ +++ LI+  CK  K+E A+ LY EM+ + + P V+ Y  L+ G F+ GN  +A +L 
Sbjct: 437 NIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLH 496

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-------------IRNCKCELRI 469
            +MQ   + P+ FT +  IDGLCK+G + +A+++F A             +    C    
Sbjct: 497 KEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNH 556

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
             Y  LI GLC  GR+  A K F  ++  G  PDV TC  +I    +   +     L  D
Sbjct: 557 VMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQAD 616

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNN 553
           +     +P+   +  L +G+ ++ 
Sbjct: 617 ILKMGIIPNSSVYRVLAKGYEESG 640



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 244/477 (51%), Gaps = 16/477 (3%)

Query: 91  LAKNKQ-YDTVVSLFKRLNSNGLFPDLF-VLNLLINCLC---KMGITSGAFVVLGRILRS 145
           LAKN Q Y  ++ +   L    L+     ++  LI CL    +  I    F VL R+  S
Sbjct: 66  LAKNPQLYSAIIHV---LTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLESS 122

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
            FTPN   F  LI      G + EA  ++ K++V    P +   N +++GL +       
Sbjct: 123 KFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTM 177

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
            K++ +MV   GA   P+VVTY ++IDG C+ G   KA  L  +M ++ I P V+ Y  L
Sbjct: 178 WKVYGDMVAR-GA--SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTIL 234

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G C      EA+ +F  M ++G+ P++ T+N M++  CK   + K   L + M+  G+
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P+ VT+  L+DG C    +  AR+  + M S G   +++ YN LI+  CK   + +A+ 
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS 354

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L+ E+    I P V TY+ L+ GL  V  + +A  L+ +M+    +P++ T+ T IDG C
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G + +A++V   +     E  I T++ LI+G CK G+++ A  L+  +  KG +PDVV
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVV 474

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
             + +I    K+G   +A  L  +M+     P+  T   L+ G  ++ + S  + L 
Sbjct: 475 AYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 216/441 (48%), Gaps = 18/441 (4%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   FD MI+ K  P +  +TIL+  L    +     S+F+ + ++G+ P+L+  N ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK+     A  +   +L     PN VTF  LI+GLC    ++ A +    +  F   
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+  +N LI+G C+  N   AL L  E+  E   I  PDV TY+ +I GLC    +++A
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEI--EKHEIL-PDVFTYSILIKGLCGVDRMEEA 387

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL +MK +   PN +TYN+LI G+C   + ++A  +  +M + G++P+++TF+ +I+ 
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK GKM+    L   M+ +G+ PD V Y +L+DG    G    A  L   M   G   +
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507

Query: 364 VYSYNILINANCKDQKVEDAVCLY-------------REMLSERIRPSVITYNTLLSGLF 410
           V++ + LI+  CKD ++ DA+ L+              E+      P+ + Y  L+ GL 
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLC 567

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-IRNCKCELRI 469
             G +  A K    M+ + + PD FT    I G  +    L  V + QA I         
Sbjct: 568 TDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR-AMHLRDVMMLQADILKMGIIPNS 626

Query: 470 ETYNCLINGLCKMGRLKTACK 490
             Y  L  G  + G LK+A +
Sbjct: 627 SVYRVLAKGYEESGYLKSALR 647



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 202/411 (49%), Gaps = 16/411 (3%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G    +EA   F  M      P + ++  ++    K       + L++ +  +GL P++ 
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVV 299

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
              +LI+ LCK      A   L  +      PN   +N LI+G C  G + EA  L  ++
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P+V T++ LI GLC       A  L +EM  + G +  P+ VTYN++IDG CK+
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK-GFL--PNAVTYNTLIDGYCKE 416

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G ++KA E+  QM ++ I PN+IT+++LI G+C     + A  L+ EM+  G+ PDVV +
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
            A+I+ + KDG   +  RL + M + G++P+  T + L+DG C  GRIS A +LF++   
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTG 536

Query: 358 KG-------------CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
                          C  +   Y  LI   C D ++  A   + +M    +RP V T   
Sbjct: 537 TDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIV 596

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
           ++ G F+  +L D + L   +    ++P+S  +     G  ++G++  A++
Sbjct: 597 IIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 147/306 (48%), Gaps = 18/306 (5%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN++  EA+     + K +  P + +++IL+  L    + +    L + +   G  P+
Sbjct: 345 KAGNLS--EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N LI+  CK G    A  V  ++      PN +TF+ LI+G C  G++  A  L+ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++ +    P+VV +  LI+G  +  NT  A +L +EM     A   P+V T + +IDGLC
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE---AGLHPNVFTLSCLIDGLC 519

Query: 236 KDGFVDKAKELLLQMK------------DRNI-NPNVITYNSLICGFCCVDDWKEAKCLF 282
           KDG +  A +L L               DR++ +PN + Y +LI G C      +A   F
Sbjct: 520 KDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFF 579

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M  +G++PDV T   +I  + +   +  V  L   +++ G+ P++  Y  L  G+   
Sbjct: 580 SDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEES 639

Query: 343 GRISRA 348
           G +  A
Sbjct: 640 GYLKSA 645


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 158/532 (29%), Positives = 269/532 (50%), Gaps = 5/532 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A +    M+     P   ++  ++   + +  +     +F+++ S GL PD    +  
Sbjct: 284 DKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSF 343

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LCK G +  A  +   +      P+ V+++ L++G   EGR  +   LF  +     
Sbjct: 344 MSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGI 403

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N    N LI+   +      A+ +F EM    G   +P+VVTY+++I   C+ G +  
Sbjct: 404 VSNCHCINILISAHAKRGMMDEAMLVFTEMQ---GQGVRPNVVTYSTLISAFCRMGRLAD 460

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV-QPDVVTFNAMI 301
           A E   QM    I PN   Y+SLI GFC   D  +AK    EMM  G+ +P++V F+++I
Sbjct: 461 AMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSII 520

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C +G++     +  L+I  G  P  VT+NSL+DG+CLVG++ +A  +  +MVS G  
Sbjct: 521 HSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIE 580

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            DV + N L++  CK  K++D + L+REML ++++P+ +TYN +L GL + G    A K+
Sbjct: 581 PDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKM 640

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
             +M  +    D  T+   + GLC+N    EA+ +F  +    C+  I   N +IN L K
Sbjct: 641 FHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYK 700

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
           + R + A  LF  +   G +P+V T   MI  L KEG +++A+ +   ME   C PS   
Sbjct: 701 VRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRL 760

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
              ++R  +Q     K    + K+    ++  + S +S ++ L S   K+RE
Sbjct: 761 LNDIIRMLLQKGDIVKAGYYMSKVDG-TIISLEASTTSLLMSLFSSKGKHRE 811



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 158/522 (30%), Positives = 265/522 (50%), Gaps = 42/522 (8%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF-VVLGR 141
           ++ IL+    + ++ D   +   RL   GL          + CLC    T  A  V+L R
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA--CDPNVVTFNTLINGLCRT 199
           +      P+ +++N +I  LC + R  EA  + +++      C P+VV+FNT+I+G  + 
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A  LF EMV + G +  PDV TYNSI+D LCK   +DKA+ +L QM D+ + P+ 
Sbjct: 246 GEVSKACNLFNEMVQK-GVV--PDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDG 302

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TYN++I G+ C   WKE+  +F +M   G+ PD VTF++ ++  CK G+      + + 
Sbjct: 303 VTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQY 362

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M  +G  PD V+Y+ L+ G+   GR +    LF SM  KG   + +  NILI+A+ K   
Sbjct: 363 MTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGM 422

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +++A+ ++ EM  + +RP+V+TY+TL+S   ++G L DA++   +M    + P++  + +
Sbjct: 423 MDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHS 482

Query: 440 YIDG------------------------------------LCKNGFVLEAVQVFQAIRNC 463
            I G                                    LC  G V++A  VF  + + 
Sbjct: 483 LIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHI 542

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                I T+N LI+G C +G+++ A  +   +   G  PDVVT +T++   CK G++D  
Sbjct: 543 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDG 602

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             L  +M  K   P+ VT+  +L G ++  + S    + H+M
Sbjct: 603 LILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEM 644



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 232/449 (51%), Gaps = 10/449 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + + F++   K G   S +A   F  M      P + S++ILL   A   ++  + +
Sbjct: 336 DTVTFSSFMSSLCKHGR--SKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNN 393

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF  +   G+  +   +N+LI+   K G+   A +V   +      PN VT++ LI+  C
Sbjct: 394 LFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFC 453

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GR+ +A   F ++     +PN   +++LI+G C   + + A +   EM+++   + +P
Sbjct: 454 RMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSK--GLHRP 511

Query: 223 DVVTYNSIIDGLCKDGFVDKAKE---LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           ++V ++SII  LC +G V  A++   L++ + DR   P ++T+NSLI G+C V   ++A 
Sbjct: 512 NIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDR---PTIVTFNSLIDGYCLVGKMEKAF 568

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            +   M+  G++PDVVT N +++  CK GK+D    L   M+ + V P TVTYN ++DG 
Sbjct: 569 GVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGL 628

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
              GR S A+++F  M+  G   D+ +Y IL+   C++   ++A+ L+ ++ +   +  +
Sbjct: 629 LRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDI 688

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
              NT+++ L++V    +A  L   +  + +VP+  T+   I  L K G V EA  +F +
Sbjct: 689 TILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSS 748

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTA 488
           +    C       N +I  L + G +  A
Sbjct: 749 MEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 197/423 (46%), Gaps = 18/423 (4%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
            V T+  L++  CR R   +       ++    A  K   +   + +  LC     D+A 
Sbjct: 123 TVRTYGILMDCCCRARRPDLGPAFVARLLR---AGLKTGTIQATTFLKCLCHAKRTDEAV 179

Query: 245 ELLL-QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ--PDVVTFNAMI 301
           ++LL +M + +  P+ I+YN++I   C     +EA  +   M   G +  PDVV+FN +I
Sbjct: 180 DVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVI 239

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K G++ K   L   M+Q+GV PD  TYNS++D  C    + +A  +   MV KG  
Sbjct: 240 HGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVE 299

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YN +I+        +++  ++R+M S+ + P  +T+++ +S L + G   DA ++
Sbjct: 300 PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEI 359

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA------IRNCKCELRIETYNCL 475
              M     +PD  +++  + G    G   +   +F +      + NC C       N L
Sbjct: 360 FQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHC------INIL 413

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+   K G +  A  +F  +Q +G  P+VVT ST+I   C+ G++  A +    M +   
Sbjct: 414 ISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGI 473

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            P+   + +L+ GF  +    K    + +M ++ L   ++   S ++  L  + +  +  
Sbjct: 474 EPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQ 533

Query: 596 NQF 598
           + F
Sbjct: 534 DVF 536


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 141/386 (36%), Positives = 227/386 (58%), Gaps = 3/386 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+C+++  P+P    F  +L  L K+K Y TV+ L K++   G+ P+L   N+L
Sbjct: 69  DDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNIL 128

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C++G+   AF V  +IL+  + PNT+TF  LI GLC +G+I +A     KL     
Sbjct: 129 INCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGF 188

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N +++ TLI+GLC+   T  AL L   +    G + +P+VV Y++IIDG+CKD  V+ 
Sbjct: 189 QFNQISYGTLIDGLCKVGETRAALDLLRRVD---GKLVQPNVVMYSTIIDGMCKDKHVND 245

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M  + I+PNV+TY++LI GF  V   K+A  LF +M+   ++PDV TFN +++
Sbjct: 246 AFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVD 305

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK GK+    +L++ M  RG  P+ VTY+S++D  C   R+ +A  L   +  +G R 
Sbjct: 306 VFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRP 365

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++++Y ILI+  C   K+EDA  ++ ++L +    +V+TY  +  G  + G   +A  L+
Sbjct: 366 NMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALL 425

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNG 448
            KM+ N  +PD+ T+      L K G
Sbjct: 426 SKMEENGCIPDAKTYELIKLSLFKKG 451



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 199/385 (51%), Gaps = 3/385 (0%)

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +LR   TP  + FN ++  L           L KK+      PN+V  N LIN  C+   
Sbjct: 78  LLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGL 137

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A  +F +++ + G    P+ +T+ ++I GLC  G + +A     ++       N I+
Sbjct: 138 IPFAFSVFAKIL-KMGY--NPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQIS 194

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y +LI G C V + + A  L   +    VQP+VV ++ +I+  CKD  ++    L   M+
Sbjct: 195 YGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMV 254

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            +G++P+ VTY++L+ GF  VG++  A +LF  M+S+  + DVY++NIL++  CK  K+ 
Sbjct: 255 SKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKIS 314

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A+ L  EM      P+++TY+++L  L +   +  A+ L+ K++   + P+  T+   I
Sbjct: 315 YALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILI 374

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLC +G + +A  +F+ +     ++ + TY  +  G CK G    A  L  +++  G I
Sbjct: 375 DGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCI 434

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDL 526
           PD  T   +   L K+G+ D A  L
Sbjct: 435 PDAKTYELIKLSLFKKGENDMAEKL 459



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 193/359 (53%), Gaps = 3/359 (0%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P  + FN ++  L ++++    L L ++M  EF  I KP++V  N +I+  C+ G +  A
Sbjct: 85  PPAIEFNKILGSLVKSKHYHTVLYLSKKM--EFRGI-KPNLVNCNILINCFCQLGLIPFA 141

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  ++     NPN IT+ +LI G C      +A     +++  G Q + +++  +I+ 
Sbjct: 142 FSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDG 201

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+      LL  +  + V P+ V Y++++DG C    ++ A +L+  MVSKG   +
Sbjct: 202 LCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPN 261

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +Y+ LI+      K++DAV L+ +M+SE I+P V T+N L+    + G +  ALKL+D
Sbjct: 262 VVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVD 321

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M      P+  T+++ +D LCK   V +AV +   +++      + TY  LI+GLC  G
Sbjct: 322 EMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSG 381

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           +L+ A  +F  L  KG    VVT   M +  CK+G  D+A+ LL  ME   C+P   T+
Sbjct: 382 KLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTY 440



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 196/380 (51%), Gaps = 8/380 (2%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P  + +N I+  L K         L  +M+ R I PN++  N LI  FC +     A  +
Sbjct: 85  PPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 144

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           F +++  G  P+ +TF  +I   C  G++ +     + ++  G   + ++Y +L+DG C 
Sbjct: 145 FAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCK 204

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           VG    A +L   +  K  + +V  Y+ +I+  CKD+ V DA  LY EM+S+ I P+V+T
Sbjct: 205 VGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 264

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+ L+SG F VG L DA+ L +KM   ++ PD +TF   +D  CK+G +  A+++   + 
Sbjct: 265 YSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMH 324

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +      I TY+ +++ LCK  R+  A  L  +L+ +G  P++ T + +I  LC  G+++
Sbjct: 325 DRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLE 384

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA-------AEKLVVSD 574
            A ++  D+  K    + VT+  +  GF +     +   LL KM        A+   +  
Sbjct: 385 DARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIK 444

Query: 575 LSLSSKVVDLLSKDKKYREC 594
           LSL  K  + ++ +K +REC
Sbjct: 445 LSLFKKGENDMA-EKLHREC 463



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 172/345 (49%), Gaps = 1/345 (0%)

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N+I Y+S    F   +D  +A  LF  ++     P  + FN ++    K      V  L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M  RG+ P+ V  N L++ FC +G I  A  +F  ++  G   +  ++  LI   C  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            ++  A+  + ++++   + + I+Y TL+ GL +VG    AL L+ ++    V P+   +
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           +T IDG+CK+  V +A  ++  + +      + TY+ LI+G   +G+LK A  LF+++  
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +   PDV T + ++   CK G++  A  L+ +M  +   P+ VT+ ++L    + ++  K
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK 350

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            V LL K+  ++ +  ++   + ++D L    K  +  N F  LL
Sbjct: 351 AVALLTKL-KDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLL 394



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 2/156 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG I+   A+   D M      P + +++ +L  L K  + D  V+L  +L   G+ P+
Sbjct: 309 KSGKISY--ALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPN 366

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +    +LI+ LC  G    A  +   +L   +    VT+  +  G C +G   EA+ L  
Sbjct: 367 MHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLS 426

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           K+    C P+  T+  +   L +     +A KL  E
Sbjct: 427 KMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 165/527 (31%), Positives = 267/527 (50%), Gaps = 37/527 (7%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI     P   +F ILL  L ++ Q +    L  R+   G  PD  + N LI+   K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              AF  L  ++++   P  VT+  +++GLC  GR  +A +L  ++    C PN+ T+N 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 192 LINGLCRTRNTLVALKLFEEMV-----------NEF-GAICK-----------------P 222
           ++ GLC  R    A K+ EEM            N F   +CK                 P
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           DVV+Y ++I+GLCK G +D A  +L QM +R   P+V+TY+SLI GFC   + + A  L 
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M+  G +P++V +N+++    + G + K   +L  M +RG  PD V+YN+ +DG C  
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            R+ +A+ +F  MV +GC  +  SY++L+   CK ++++DA+ L  +   +     ++ Y
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLY 360

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVV--PDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
             LL GL + G   +A  L  K+ L++ +  PD F +   +D  CK   + +A+Q+ + +
Sbjct: 361 TVLLDGLCKGGRFDEACALFSKV-LDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419

Query: 461 --RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
             RNC     + T+N L++GLC   RL  A  +   +  +G IPD VT  T++  +CK G
Sbjct: 420 LERNC---CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCG 476

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +   A +L  +     CVP  VT+  L+ G V  N   +  +L  K+
Sbjct: 477 KSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 523



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 272/527 (51%), Gaps = 15/527 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +AV   D M     SP + ++ +++  L + ++ D    + + +   G FPD+   N 
Sbjct: 96  TKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 155

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            I  LCK      A   L R+     TP+ V++  +INGLC  G +  A+R+  ++    
Sbjct: 156 FIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRG 212

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P+VVT+++LI+G C+      A+ L + M+ + G  C+P++V YNS++  L + G + 
Sbjct: 213 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSML-KLG--CRPNMVAYNSLLGALHRLGHIG 269

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA+++L++M+ R   P+V++YN+ I G C  +  K+AK +F  M++ G  P+  +++ ++
Sbjct: 270 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLV 329

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGC 360
              CK  ++D    L+E   ++    D + Y  L+DG C  GR   A  LF  ++  K C
Sbjct: 330 EELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKIC 389

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             DV+ YN++++++CK ++++ A+ ++++ML ER   +V+T+N L+ GL     L DA  
Sbjct: 390 EPDVFFYNVMLDSHCKRRQIDKALQIHKQML-ERNCCNVVTWNILVHGLCVDDRLSDAET 448

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           ++  M     +PD  T+ T +D +CK G    A+++F+      C   + TY+ LI GL 
Sbjct: 449 MLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV 508

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
                + A  LF +L       DV   + MI    + G  D    L +++   +  P+  
Sbjct: 509 HENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNAR 561

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           TF   + G +   +       L   A +     DL +++ ++D+ +K
Sbjct: 562 TFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAK 608



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 162/495 (32%), Positives = 242/495 (48%), Gaps = 45/495 (9%)

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           I +SC  P+  TF  L+ GLC   ++ +A +L  ++    C P+   +N LI+G  + ++
Sbjct: 2   IDKSC-QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A K   EMV      C P VVTY +I+DGLCK G    A +LL +M+D+  +PN+ T
Sbjct: 61  FGQAFKFLAEMVKNH---CLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYT 117

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           YN ++ G C      EAK +  EM   G  PDVVT+N+ I   CK  ++D+  + L  M 
Sbjct: 118 YNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM- 176

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
              V PD V+Y ++++G C  G +  A  +   M ++GC  DV +Y+ LI+  CK  +VE
Sbjct: 177 --PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVE 234

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A+ L   ML    RP+++ YN+LL  L ++G++G A  ++ +M+     PD  ++   I
Sbjct: 235 RAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACI 294

Query: 442 DGLCKNGFVLEAVQVFQAI--RNC----------------KCEL---------------- 467
           DGLCK   V +A  VF  +  R C                K EL                
Sbjct: 295 DGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQI 354

Query: 468 -RIETYNCLINGLCKMGRLKTACKLFHR-LQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
             I  Y  L++GLCK GR   AC LF + L  K   PDV   + M+   CK  Q+DKA  
Sbjct: 355 VDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQ 414

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           +   M  +NC  + VT+  L+ G   +++ S    +L  M  E   + D      +VD +
Sbjct: 415 IHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGF-IPDFVTYGTLVDAM 472

Query: 586 SKDKKYRECLNQFRH 600
            K  K    L  F  
Sbjct: 473 CKCGKSAAALELFEE 487



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 204/384 (53%), Gaps = 6/384 (1%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C+PD  T+  ++ GLC+   ++KA++LL +MK+    P+   YN+LI G+    D+ +A 
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
               EM+ N   P VVT+  +++  CK G+     +LL+ M  +G +P+  TYN +++G 
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPS 398
           C   ++  A+++   M  +G   DV +YN  I   CK  +V++A    R+ L+   + P 
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA----RKFLARMPVTPD 181

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           V++Y T+++GL + G+L  A +++D+M      PD  T+++ IDG CK G V  A+ +  
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
           ++    C   +  YN L+  L ++G +  A  +   ++ +G  PDVV+ +  I  LCK  
Sbjct: 242 SMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAE 301

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
           ++ KA  +   M  + C P+  ++  L+    +  +    + L+ + A EK  + D+ L 
Sbjct: 302 RVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQ-AREKYQIVDILLY 360

Query: 579 SKVVDLLSKDKKYRECLNQFRHLL 602
           + ++D L K  ++ E    F  +L
Sbjct: 361 TVLLDGLCKGGRFDEACALFSKVL 384



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 211/456 (46%), Gaps = 48/456 (10%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   KSG++ S  A    D M     +P + +++ L+    K  + +  + 
Sbjct: 181 DVVSYTTVINGLCKSGDLDS--ASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L   +   G  P++   N L+  L ++G    A  +L  + R  FTP+ V++N  I+GLC
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN-----TLV------------- 204
              R+ +A  +F ++    C PN  +++ L+  LC+ +      TLV             
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 205 -----------------ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
                            A  LF ++++E   IC+PDV  YN ++D  CK   +DKA ++ 
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDE--KICEPDVFFYNVMLDSHCKRRQIDKALQIH 416

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            QM +RN   NV+T+N L+ G C  D   +A+ + + M+D G  PD VT+  +++  CK 
Sbjct: 417 KQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKC 475

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           GK      L E  ++ G  PD VTY++L+ G         A  LF  +       DV  +
Sbjct: 476 GKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALW 528

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG-LFQVGNLGDALKLIDKMQ 426
           N +I    ++   +  + L+ E++   + P+  T+   +SG L +  +LG A  L D+  
Sbjct: 529 NAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAV 588

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
                PD F   T ID   K G + EA ++F +++ 
Sbjct: 589 KGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 158/508 (31%), Positives = 277/508 (54%), Gaps = 10/508 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            A + FD +++ + +  +      L+ +A+       +SLF R+       DL   +++I
Sbjct: 50  HAHHLFDELLR-RDTTSIFDLNSALSAVARESPA-VALSLFNRMPR----ADLCTYSIVI 103

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLNVFAC 182
            C  + G    AF  LGR++R+ +T   +TF+ L+ GLC + R  +A  +  +++    C
Sbjct: 104 GCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGC 163

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            PN  ++N L+ GLC    +  AL L   M+ ++    C PDVV+Y ++I+GL ++G +D
Sbjct: 164 TPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLD 223

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA  L  +M D+ ++PN ITYN L+ G+C     KEA  +F +M  +GV+PDVVT+N ++
Sbjct: 224 KAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLM 283

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
            Y CK+G+  +  ++ + M+++G  PD+  Y +L+ G+   G + +  +L   MV  G +
Sbjct: 284 VYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQ 343

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D Y +NILI A  K   V++A+  + +M  + + P+++TY T++  L +VG + DA+  
Sbjct: 344 PDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQ 403

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV-FQAIRNCKCELRIETYNCLINGLC 480
            D++    + P+   F T I GLC      +A ++  + I    C   I  +N L+N LC
Sbjct: 404 FDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTI-FFNTLLNHLC 462

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G +  A  +F  +       DV+T +T+I   C +G++D+A  LL  M      P+EV
Sbjct: 463 KEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEV 522

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+ T++ G+ +N +      L  +MA++
Sbjct: 523 TYNTIINGYCKNGRIEDACSLFRQMASK 550



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 276/556 (49%), Gaps = 7/556 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   + G +  ++A   FD M+    SP   ++  LL     + +    + 
Sbjct: 205 DVVSYTTVINGLLREGQL--DKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIG 262

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F+++  +G+ PD+   N L+  LCK G +  A  V   +++    P++  +  L++G  
Sbjct: 263 IFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYA 322

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            EG +++  +L   +      P+   FN LI    +      A+  F +M  +      P
Sbjct: 323 TEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQG---LHP 379

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           ++VTY +++D LC+ G VD A     ++    + PN + + +LI G C  D W +A+ L 
Sbjct: 380 NIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELA 439

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
           +EM+  G+ P+ + FN ++N+ CK+G + +   + +LM++  V  D +TY +L+DG+CL 
Sbjct: 440 VEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLD 499

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G++  A +L   MV  G + +  +YN +IN  CK+ ++EDA  L+R+M S+ + P ++ Y
Sbjct: 500 GKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIY 559

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           +T+L GLFQ   +  A +L   M    +     T+   + GLC+N    +A+++F  +  
Sbjct: 560 STILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCL 619

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
               L+  T+N +I+ L K GR   A  LF  L  +G +P+VVT   M+  L ++G +++
Sbjct: 620 IDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEE 679

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
            +DL L +E   C         L+    Q  +  K  V L K+      +   +  S V 
Sbjct: 680 LDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV- 738

Query: 583 DLLSKDKKYRECLNQF 598
             L    KY + +N  
Sbjct: 739 -FLVSSGKYDQHINSI 753



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 162/332 (48%), Gaps = 6/332 (1%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           +E+  + + + +   + D+ T++ +I    + G +D     L  +I+ G     +T++ L
Sbjct: 78  RESPAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPL 137

Query: 336 MDGFCLVGRISRARELFVS-MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           + G C   R S A ++ +  M + GC  + +SYNIL+   C + + + A+ L   M+++ 
Sbjct: 138 LKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADD 197

Query: 395 IR----PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
            R    P V++Y T+++GL + G L  A  L D+M    + P+  T+   + G C +G  
Sbjct: 198 TRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKP 257

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            EA+ +F+ +     E  + TYN L+  LCK GR   A K+F  +  KG  PD     T+
Sbjct: 258 KEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTL 317

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           +H    EG + + + LL  M      P    F  L+  + ++    + ++   KM  + L
Sbjct: 318 LHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGL 377

Query: 571 VVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             + ++  + V+D L +  K  + ++QF  L+
Sbjct: 378 HPNIVTYGT-VMDALCRVGKVDDAMSQFDRLI 408


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 161/481 (33%), Positives = 265/481 (55%), Gaps = 40/481 (8%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I  N+A+  F  M + +P P +  F+ LL  +AK K+Y+ V+SLF+ +   
Sbjct: 43  ERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEIL 102

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  DL+  + LI+C C+    S A   LG++++  F                       
Sbjct: 103 GISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGF----------------------- 139

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
                       +P++VTF +L+NG C       A+ L +++V   G   +P+VV YN+I
Sbjct: 140 ------------EPSIVTFGSLVNGFCHVNRIQEAMSLVDQIV---GLGYEPNVVIYNTI 184

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ID LC++  VD A ++L  M+   I P+VITYNSLI        W  +  +  +MM  G+
Sbjct: 185 IDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGI 244

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PDV+TF+AMI+   K+G++ +  +  + MIQR V+P+ VTYNSL++G C+ G +  A++
Sbjct: 245 HPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKK 304

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +   MVSKG   +  +YN L+N  CK ++V+DA+ +   M  + +     TYNTL  G  
Sbjct: 305 VLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYC 364

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           Q G    A K++ +M    V+PD +TF   +DGLC++G + +A+   + ++  +  + I 
Sbjct: 365 QAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGII 424

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYN +I G+CK  +++ A  LF  L  KG  PDV+T +TM+  L ++    +A++L   M
Sbjct: 425 TYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKM 484

Query: 531 E 531
           +
Sbjct: 485 K 485



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 215/404 (53%), Gaps = 3/404 (0%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++V F+ L+  + + +     + LF  +  E   I   D+ +++++ID  C+   +  A
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHI--EILGISH-DLYSFSTLIDCFCRCSRLSLA 127

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
              L +M      P+++T+ SL+ GFC V+  +EA  L  +++  G +P+VV +N +I+ 
Sbjct: 128 LSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDS 187

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C++ ++D    +L  M + G+ PD +TYNSL+      G+   +  +   M+  G   D
Sbjct: 188 LCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPD 247

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +++ +I+   K+ ++ +A   Y EM+   + P+++TYN+L++GL   G L +A K+++
Sbjct: 248 VITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLN 307

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M      P++ T+ T ++G CK+  V +A+++   + +   +    TYN L  G C+ G
Sbjct: 308 FMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAG 367

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +   A K+  R+   G +PD+ T + ++  LC+ G+++KA   L D++    V   +T+ 
Sbjct: 368 QFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYN 427

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            +++G  + NK      L   +A + +    ++ ++ ++ L  K
Sbjct: 428 IIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRK 471



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 182/361 (50%), Gaps = 1/361 (0%)

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           + A  L   M +    P+++ ++ L+     +  ++    LF  +   G+  D+ +F+ +
Sbjct: 55  NDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTL 114

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  C+  ++      L  M++ G  P  VT+ SL++GFC V RI  A  L   +V  G 
Sbjct: 115 IDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGY 174

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V  YN +I++ C++++V+ A+ +   M    IRP VITYN+L++ LF  G  G + +
Sbjct: 175 EPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSAR 234

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           ++  M    + PD  TF+  ID   K G +LEA + +  +     +  I TYN LINGLC
Sbjct: 235 ILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLC 294

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
             G L  A K+ + +  KG  P+ VT +T+++  CK  ++D A  +L  M          
Sbjct: 295 IHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTF 354

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRH 600
           T+ TL +G+ Q  + +    +L +M +   V+ D+   + ++D L +  K  + L +   
Sbjct: 355 TYNTLYQGYCQAGQFNAAEKVLARMVSCG-VLPDIYTFNMLLDGLCEHGKIEKALVKLED 413

Query: 601 L 601
           L
Sbjct: 414 L 414



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 1/224 (0%)

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K  DA+ L+ +M   R  PS++ ++ LL  + ++      + L   +++  +  D ++F+
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T ID  C+   +  A+     +     E  I T+  L+NG C + R++ A  L  ++   
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P+VV  +T+I  LC+  Q+D A D+L  ME     P  +T+ +L+     + K    
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             +L  M     +  D+   S ++D+  K+ +  E   Q+  ++
Sbjct: 233 ARILSDMMRMG-IHPDVITFSAMIDVFGKEGQLLEAKKQYDEMI 275



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 67/122 (54%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           Q++    +  R+ S G+ PD++  N+L++ LC+ G    A V L  + +S      +T+N
Sbjct: 368 QFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYN 427

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I G+C   ++ +A  LF  L +    P+V+T+ T++ GL R R  L A +L+ +M  +
Sbjct: 428 IIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKD 487

Query: 216 FG 217
            G
Sbjct: 488 DG 489



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 95/211 (45%)

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           + + A  LF  M        +  ++ L+ A  K +K E  + L+R +    I   + +++
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL+    +   L  AL  + KM      P   TF + ++G C    + EA+ +   I   
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             E  +  YN +I+ LC+  ++ TA  + + ++  G  PDV+T +++I  L   G+   +
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             +L DM      P  +TF  ++  F +  +
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMIDVFGKEGQ 263


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 150/452 (33%), Positives = 243/452 (53%), Gaps = 6/452 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            E + F + MI     P + + T L+    ++ +      + + L ++G  PD+   N+L
Sbjct: 123 EEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVL 182

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   CK G    A  VL R+      P+ VT+N ++  LC  G++ EA  +  +     C
Sbjct: 183 IGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQREC 239

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V+T+  LI   C       A+KL +EM  +    CKPDVVTYN +I+G+CK+G +D+
Sbjct: 240 YPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG---CKPDVVTYNVLINGICKEGRLDE 296

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A + L  M      PNVIT+N ++   C    W +A+ L  +M+  G  P VVTFN +IN
Sbjct: 297 AIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN 356

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           + C+   + +   +LE M + G  P++++YN L+ GFC   ++ RA E    MVS+GC  
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 416

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +YN L+ A CKD KV+ AV +  ++ S+   P +ITYNT++ GL +VG    A++L+
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+   + PD  T++T + GL + G V EA+++F  +     +    TYN ++ GLCK 
Sbjct: 477 EEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 536

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +   A      +  KG  P   T + +I  +
Sbjct: 537 QQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 145/449 (32%), Positives = 234/449 (52%), Gaps = 6/449 (1%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           F  N+ +  L + G        L R++     P+ +    LI G C  G+  +A R+ + 
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           L      P+V+T+N LI G C++     AL++ E M         PDVVTYN+I+  LC 
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS------VAPDVVTYNTILRSLCD 220

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G + +A E+L +   R   P+VITY  LI   C      +A  L  EM   G +PDVVT
Sbjct: 221 SGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT 280

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +IN  CK+G++D+  + L  M   G  P+ +T+N ++   C  GR   A  L   M+
Sbjct: 281 YNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDML 340

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KGC   V ++NILIN  C+ + +  A+ +  +M      P+ ++YN LL G  Q   + 
Sbjct: 341 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMD 400

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A++ ++ M      PD  T+ T +  LCK+G V  AV++   + +  C   + TYN +I
Sbjct: 401 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVI 460

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +GL K+G+ + A +L   ++ KG  PD++T ST++  L +EG++D+A  +  DME  +  
Sbjct: 461 DGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIK 520

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           PS VT+  ++ G  +  + S+ +  L  M
Sbjct: 521 PSAVTYNAIMLGLCKAQQTSRAIDFLAYM 549



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 151/488 (30%), Positives = 252/488 (51%), Gaps = 15/488 (3%)

Query: 72  MIKMKPSP----GMTSFT-----ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +I M+ SP    G  SF      I L  L +N + +  +   +R+   G  PD+     L
Sbjct: 88  VIGMESSPIGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSL 147

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+ G T  A  ++  +  S   P+ +T+N LI G C  G I +A  + ++++V   
Sbjct: 148 IRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA-- 205

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VVT+NT++  LC +     A+++ +  +      C PDV+TY  +I+  C D  V +
Sbjct: 206 -PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE---CYPDVITYTILIEATCNDSGVGQ 261

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +M+ +   P+V+TYN LI G C      EA      M   G +P+V+T N ++ 
Sbjct: 262 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILR 321

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C  G+     RLL  M+++G +P  VT+N L++  C    + RA ++   M   GC  
Sbjct: 322 SMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVP 381

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  SYN L++  C+++K++ A+     M+S    P ++TYNTLL+ L + G +  A++++
Sbjct: 382 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEIL 441

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           +++      P   T+ T IDGL K G    AV++ + +R    +  I TY+ L+ GL + 
Sbjct: 442 NQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGRE 501

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G++  A K+FH ++     P  VT + ++  LCK  Q  +A D L  M  K C P+E T+
Sbjct: 502 GKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATY 561

Query: 543 CTLLRGFV 550
             L+ G  
Sbjct: 562 TILIEGIA 569



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 139/442 (31%), Positives = 243/442 (54%), Gaps = 14/442 (3%)

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N  +  L   G + E  +  +++      P+V+   +LI G CR+  T  A ++ E + N
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
             GA+  PDV+TYN +I G CK G +DKA E+L +M   ++ P+V+TYN+++   C    
Sbjct: 170 S-GAV--PDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223

Query: 275 WKEAKCLFIEMMDNGVQ----PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            KEA    +E++D  +Q    PDV+T+  +I   C D  + +  +LL+ M ++G  PD V
Sbjct: 224 LKEA----MEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 279

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TYN L++G C  GR+  A +   +M S GC+ +V ++NI++ + C   +  DA  L  +M
Sbjct: 280 TYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDM 339

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           L +   PSV+T+N L++ L +   LG A+ +++KM  +  VP+S ++   + G C+   +
Sbjct: 340 LRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKM 399

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             A++  + + +  C   I TYN L+  LCK G++  A ++ ++L  KG  P ++T +T+
Sbjct: 400 DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTV 459

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           I  L K G+ + A +LL +M  K   P  +T+ TLLRG  +  K  + + + H M    +
Sbjct: 460 IDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSI 519

Query: 571 VVSDLSLSSKVVDLLSKDKKYR 592
             S ++ ++ ++ L    +  R
Sbjct: 520 KPSAVTYNAIMLGLCKAQQTSR 541



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 195/387 (50%), Gaps = 3/387 (0%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G   S E     + + +M  +P + ++  +L  L  + +    + +  R      +PD+ 
Sbjct: 185 GYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVI 244

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
              +LI   C       A  +L  + +    P+ VT+N LING+C EGR+ EA +    +
Sbjct: 245 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 304

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
             + C PNV+T N ++  +C T   + A +L  +M+ +    C P VVT+N +I+ LC+ 
Sbjct: 305 PSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG---CSPSVVTFNILINFLCRK 361

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             + +A ++L +M      PN ++YN L+ GFC       A      M+  G  PD+VT+
Sbjct: 362 RLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTY 421

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N ++   CKDGK+D    +L  +  +G +P  +TYN+++DG   VG+   A EL   M  
Sbjct: 422 NTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRR 481

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           KG + D+ +Y+ L+    ++ KV++A+ ++ +M    I+PS +TYN ++ GL +      
Sbjct: 482 KGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSR 541

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGL 444
           A+  +  M      P   T+   I+G+
Sbjct: 542 AIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 21/206 (10%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ + + M+     P + ++  LLT L K+ + D  V +  +L+S G  P L   N +
Sbjct: 400 DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTV 459

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K+G T  A  +L  + R    P+ +T++ L+ GL  EG++ EA ++F  +   + 
Sbjct: 460 IDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSI 519

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL-------- 234
            P+ VT+N ++ GLC+ + T  A+     MV +    CKP   TY  +I+G+        
Sbjct: 520 KPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG---CKPTEATYTILIEGIADEGLAEE 576

Query: 235 --------CKDGFVDK--AKELLLQM 250
                   C  GFV K  A++++++M
Sbjct: 577 ALELLNELCSRGFVKKSSAEQVVVKM 602


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 161/515 (31%), Positives = 269/515 (52%), Gaps = 38/515 (7%)

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
           V      ++  G    L+  N L+  L K  +  GA  +  ++L S   P+ +TFN LIN
Sbjct: 189 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLIN 248

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
            L  +G++ EA  +  ++  +   P+V T+ +LI G CR RN  +A  +F+ MV E    
Sbjct: 249 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG--- 305

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C P+ VTY+++I+GLC +G VD+A ++L +M ++ I P V TY   I   C ++  +EA 
Sbjct: 306 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 365

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L   M   G +P+V T+ A+I+   + GK++    L   M++ G+ P+TVTYN+L++  
Sbjct: 366 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 425

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C+ GR S A ++F  M   G   +  +YN +I   C    +E A+ L+ +ML     P+V
Sbjct: 426 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 485

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT----------------------- 436
           +TYNTL++G    GN+ +A +L+D M+ N   PD +T                       
Sbjct: 486 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 545

Query: 437 ------------FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
                       + T IDG  K+G V  A+ + + +    C   +E+YN +INGL K  R
Sbjct: 546 MVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENR 605

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
              A K+  ++  +G +P+V+T +T+I  LC+ G+   A  +  DME + C+P+  T+ +
Sbjct: 606 FSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 665

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           L+ G  Q  K  +  +LL +M  + L   +++ +S
Sbjct: 666 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 700



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 172/535 (32%), Positives = 262/535 (48%), Gaps = 10/535 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K G +   EA      + +   SP + ++T L+    +N+  D    +F R+  
Sbjct: 246 LINILSKKGKV--REAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 303

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G  P+    + LIN LC  G    A  +L  ++     P   T+   I  LCA     E
Sbjct: 304 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEE 363

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  L  ++    C PNV T+  LI+GL R     VA+ L+ +M+ E G +  P+ VTYN+
Sbjct: 364 AIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE-GLV--PNTVTYNA 420

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+ LC  G    A ++   M+      N  TYN +I G C   D ++A  LF +M+  G
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 480

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             P VVT+N +IN     G ++   RLL+LM + G  PD  TYN L+ GF   G++  A 
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 540

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
             F  MV  G   +  SY  LI+ + KD KV+ A+ L   M      P+V +YN +++GL
Sbjct: 541 FYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL 600

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            +     +A K+ DKM    ++P+  T+ T IDGLC+NG    A ++F  +   KC   +
Sbjct: 601 SKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 660

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY+ LI GLC+ G+   A  L   ++ KG  PD VT +++I      G++D A  LL  
Sbjct: 661 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 720

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           M    C P+  T+  LL+G      + + ++L  K+A +   V   S   K V+ 
Sbjct: 721 MVDVGCKPNYRTYSVLLKGL-----QKECLLLEEKVAVQHEAVYSFSPHEKDVNF 770



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 259/542 (47%), Gaps = 62/542 (11%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+  +  M+K    P   ++  L+  L    ++ T + +F  +  +G   +    N +I 
Sbjct: 399 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 458

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LC  G    A V+  ++L+    P  VT+N LING   +G +  AARL   +    C+P
Sbjct: 459 GLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEP 518

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +  T+N L++G  +      A   F+EMV E G    P+ V+Y ++IDG  KDG VD A 
Sbjct: 519 DEWTYNELVSGFSKWGKLESASFYFQEMV-ECG--LNPNPVSYTTLIDGHSKDGKVDIAL 575

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN-- 302
            LL +M++   NPNV +YN++I G    + + EA+ +  +M + G+ P+V+T+  +I+  
Sbjct: 576 SLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGL 635

Query: 303 ---------------------------YN------CKDGKMDKVNRLLELMIQRGVNPDT 329
                                      Y+      C++GK D+   LL+ M ++G+ PD 
Sbjct: 636 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDE 695

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI------------------ 371
           VT+ SL+DGF ++GRI  A  L   MV  GC+ +  +Y++L+                  
Sbjct: 696 VTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQH 755

Query: 372 ------NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
                 + + KD   E    L   M      P++ TY+TL+SGL + G   +A +L+  M
Sbjct: 756 EAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 815

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +     PD   + + +   CKN  V  A+++F +I     +L +  Y  LI  LCK G++
Sbjct: 816 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 875

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A  LF  +  K    D +  + ++  L KEG++D    LL  ME+KN  P+  T+  L
Sbjct: 876 EEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935

Query: 546 LR 547
            R
Sbjct: 936 GR 937



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 56/134 (41%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    +  LL    KN + D  + +F  + + G    L +   LI  LCK G    A  +
Sbjct: 822 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 881

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +L   +  + + +  L++GL  EG +    +L   +      PN+ T+  L   L R
Sbjct: 882 FDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSR 941

Query: 199 TRNTLVALKLFEEM 212
              ++ +  L +++
Sbjct: 942 IGKSIESEPLADKL 955


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 172/568 (30%), Positives = 285/568 (50%), Gaps = 46/568 (8%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F + M +  P P + ++T ++  L K + +D   ++F+++  NG+ P++   N LI+   
Sbjct: 226 FLEMMDRGIP-PDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYL 284

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
            +G       +L  +      PN  T+  L+N LC  GR  EA   F  +      P+V 
Sbjct: 285 SIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVT 344

Query: 188 TFNTLINGLCRTRNTLVALK-LFEEMVNE------------FGAICK------------- 221
           T+  +++G   T+  L  +  L   MV              F A  K             
Sbjct: 345 TYGIMLHGYA-TKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNK 403

Query: 222 -------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                  PD V+Y ++ID LCK G VD A+    QM +  + P+++ ++SL+ G C VD 
Sbjct: 404 MRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDK 463

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           W++ + LF EM++ G+ P++V FN ++   CK+G++ +  RL++ +   GV PD ++YN+
Sbjct: 464 WEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNT 523

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L+DG CL G I  A +L   MVS G + D +SYN L++  CK  +++ A   +R+MLS  
Sbjct: 524 LIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNG 583

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I P V+TYNT+L GLFQ     +A +L   M  +    D +T+   ++GLCK+  V EA+
Sbjct: 584 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAI 643

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           ++FQ + +   +L I T+N +I  L K GR + A  LF  +   G + +VVT   ++  L
Sbjct: 644 KMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENL 703

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
            +EG +++ + L   ME     P+      L+R  +     S+    L K+      V +
Sbjct: 704 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSV-E 762

Query: 575 LSLSSKVVDLLSKD----------KKYR 592
            S +S ++ + S D          KKYR
Sbjct: 763 ASTTSMLISIFSSDEYQHHAKSLPKKYR 790



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 164/568 (28%), Positives = 291/568 (51%), Gaps = 12/568 (2%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK-------QYD 98
            + + + DR +SG++   +A+  FD ++       + +F  LL  ++++        + +
Sbjct: 14  ELERVIADRARSGSLGLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESE 73

Query: 99  TVVSLFKRLNSN---GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           TVVSLF R+  +    + P+    ++LI C C+MG     F   G IL++ +  + +  N
Sbjct: 74  TVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVIN 133

Query: 156 FLINGLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
            L+NGLC   R+ EA   L +++    C P+ V++N L+ GLC  +    AL+L   M +
Sbjct: 134 QLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMAD 193

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
           +    C P+VV+Y+++I+G   +G VDK   L L+M DR I P+V+TY ++I G C    
Sbjct: 194 DQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQL 253

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           +  A+ +F +M+DNGV+P++ T+N +I+     GK  +V R+LE M   G  P+  TY S
Sbjct: 254 FDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGS 313

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++  C  GR   AR  F SM+ KG +  V +Y I+++       + +   L   M++  
Sbjct: 314 LLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANG 373

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I P+   +N   S   + G +  A+ + +KM+   + PD+ ++   ID LCK G V +A 
Sbjct: 374 ISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAE 433

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
             F  + N      I  ++ L+ GLC + + +   +LF  + + G  P++V  +T++  L
Sbjct: 434 VKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNL 493

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           CKEG++ +   L+  +E     P  +++ TL+ G        +   LL  M +  L    
Sbjct: 494 CKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDS 553

Query: 575 LSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            S ++ ++    K  +     + FR +L
Sbjct: 554 FSYNT-LLHGYCKAGRIDSAYSHFRKML 580



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/590 (24%), Positives = 271/590 (45%), Gaps = 66/590 (11%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA +FFD MI     P +T++ I+L   A       +  L   + +NG+ P+  + N+  
Sbjct: 326 EARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFF 385

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +   K GI   A  +  ++ +   +P+ V++  LI+ LC  GR+ +A   F ++      
Sbjct: 386 SAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVT 445

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++V F++L+ GLC         +LF EM+N       P++V +N+I+  LCK+G V + 
Sbjct: 446 PDIVVFSSLVYGLCTVDKWEKVEELFFEMLN---VGIHPNIVFFNTILCNLCKEGRVMEG 502

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           + L+  ++   + P+VI+YN+LI G C      EA  L   M+  G++PD  ++N +++ 
Sbjct: 503 QRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHG 562

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G++D        M+  G+ P  VTYN+++ G     R S A+EL+++M++ G + D
Sbjct: 563 YCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWD 622

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL---- 419
           +Y+YNI++N  CK   V++A+ +++ + S+ ++ ++IT+N ++  L + G   DA+    
Sbjct: 623 IYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 682

Query: 420 -------------------------------KLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
                                           L   M+ N   P+S      +  L   G
Sbjct: 683 AIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLC---------------------------- 480
            +  A      +      +   T + LI+                               
Sbjct: 743 DISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIK 802

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K  R+  A  LF  +  KG  PDVVT +T++H L + G+  +A +L L M       +  
Sbjct: 803 KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 862

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           T+  +L G  ++N   +   +   + ++ L ++ ++ +  +  LL   +K
Sbjct: 863 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRK 912



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 160/550 (29%), Positives = 272/550 (49%), Gaps = 33/550 (6%)

Query: 68   FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            FF+ M+ +   P +  F  +L  L K  +      L   +   G+ PD+   N LI+  C
Sbjct: 471  FFE-MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHC 529

Query: 128  KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
              G    A  +L  ++     P++ ++N L++G C  GRI  A   F+K+      P VV
Sbjct: 530  LAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVV 589

Query: 188  TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            T+NT+++GL +T+    A +L+  M+N   +  K D+ TYN I++GLCK   VD+A ++ 
Sbjct: 590  TYNTILHGLFQTKRFSEAKELYLNMIN---SGTKWDIYTYNIILNGLCKSNCVDEAIKMF 646

Query: 248  LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
              +  + +  N+IT+N +I         ++A  LF  +  NG+  +VVT+  ++    ++
Sbjct: 647  QNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEE 706

Query: 308  GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA------------------R 349
            G +++ + L   M + G  P++   N+L+      G ISRA                   
Sbjct: 707  GSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTT 766

Query: 350  ELFVSMVSKG-CRHDVYS----YNILINANC-----KDQKVEDAVCLYREMLSERIRPSV 399
             + +S+ S    +H   S    Y IL  AN      K ++++DA  L+REML + + P V
Sbjct: 767  SMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDV 826

Query: 400  ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            +TYNT+L GLFQ G   +A +L   M  +    + +T+   ++GLCK+  V EA ++FQ+
Sbjct: 827  VTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQS 886

Query: 460  IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
            + +   +L I T+N +I  L K GR + A  LF  +   G +PDVVT   +   L +EG 
Sbjct: 887  LCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGS 946

Query: 520  MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            +++ + L L ME             L+R  +Q    S+    L K+  EK    + S +S
Sbjct: 947  LEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKL-DEKNFSLEASTTS 1005

Query: 580  KVVDLLSKDK 589
            +++ L S+ +
Sbjct: 1006 ELISLFSRGE 1015



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 220/488 (45%), Gaps = 20/488 (4%)

Query: 43   DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
            D  S    L+   K+G I S  A   F  M+    +PG+ ++  +L  L + K++     
Sbjct: 552  DSFSYNTLLHGYCKAGRIDS--AYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE 609

Query: 103  LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            L+  + ++G   D++  N+++N LCK      A  +   +       N +TFN +I  L 
Sbjct: 610  LYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALL 669

Query: 163  AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK- 221
              GR  +A  LF  +       NVVT+  ++  L    +        EE  + F A+ K 
Sbjct: 670  KGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGS-------LEEFDSLFSAMEKN 722

Query: 222  ---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
               P+    N+++  L   G + +A   L ++ +RN +    T + LI  F   +    A
Sbjct: 723  GTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHA 782

Query: 279  KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
            K L  +        +    +A+I    K  ++D    L   M+ +G+ PD VTYN+++ G
Sbjct: 783  KSLPKKYR----ILNEANSSALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHG 835

Query: 339  FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
                GR S A+EL++SM++   + ++Y+YNI++N  CK   V++A  +++ + S+ ++ +
Sbjct: 836  LFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 895

Query: 399  VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            +IT+N ++  L + G   DA+ L   +  N +VPD  T+    + L + G + E   +F 
Sbjct: 896  IITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFL 955

Query: 459  AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
             +      L     N L+  L + G +  A     +L  K    +  T S +I    +  
Sbjct: 956  TMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGE 1015

Query: 519  QMDKANDL 526
                A  L
Sbjct: 1016 YQHHAKSL 1023


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/504 (30%), Positives = 262/504 (51%), Gaps = 19/504 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA++ +    KM   P M +  ++L  L K  ++DT+  ++  + + G  P++     L
Sbjct: 143 EEALWVY---YKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTL 199

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C+ G    AF +   ++     P  V +  LI GLC E RI EA  +F+ +     
Sbjct: 200 IDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+NT+++G C+  +   AL+L+ EM+   G    P+VVT+  +IDGLCK   +  
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYXEML---GDGLLPNVVTFGILIDGLCKTDEMVS 316

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++ L+ M    + PN+  YN LI G+C   +  EA  L  E+  + + PDV T++ +I 
Sbjct: 317 ARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIK 376

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   +M++ + LL+ M ++G  P+ VTYN+L+DG+C  G + +A E+   M  KG   
Sbjct: 377 GLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP 436

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++ +++ LI+  CK  K+E A+ LY EM+ + + P V+ Y  L+ G F+ GN  +A +L 
Sbjct: 437 NIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLH 496

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-------------IRNCKCELRI 469
            +MQ   + P+ FT +  IDGLCK+G + +A+++F A             +    C    
Sbjct: 497 KEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNH 556

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
             Y  LI GLC  GR+  A K F  ++  G  PDV TC  +I    +   +     L  D
Sbjct: 557 VMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQAD 616

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNN 553
           +     +P+   +  L +G+ ++ 
Sbjct: 617 ILKMGIIPNSSVYRVLAKGYEESG 640



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/477 (31%), Positives = 243/477 (50%), Gaps = 16/477 (3%)

Query: 91  LAKNKQ-YDTVVSLFKRLNSNGLFPDLF-VLNLLINCLCKMG---ITSGAFVVLGRILRS 145
           LAKN Q Y  ++ +   L    L+     ++  LI CL K     I    F VL R+  S
Sbjct: 66  LAKNPQLYSAIIHV---LTGAKLYAKARCLMRDLIQCLQKSRRSRICCSVFNVLSRLESS 122

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
            FTPN   F  LI      G + EA  ++ K++V    P +   N +++GL +       
Sbjct: 123 KFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTM 177

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
            K++ +MV   GA   P+VVTY ++IDG C+ G   KA  L  +M ++ I P V+ Y  L
Sbjct: 178 WKVYGDMVAR-GA--SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTIL 234

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G C      EA+ +F  M ++G+ P++ T+N M++  CK   + K   L   M+  G+
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGL 294

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P+ VT+  L+DG C    +  AR+  + M S G   +++ YN LI+  CK   + +A+ 
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS 354

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L+ E+    I P V TY+ L+ GL  V  + +A  L+ +M+    +P++ T+ T IDG C
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G + +A++V   +     E  I T++ LI+G CK G+++ A  L+  +  KG +PDVV
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVV 474

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
             + +I    K+G   +A  L  +M+     P+  T   L+ G  ++ + S  + L 
Sbjct: 475 AYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 215/439 (48%), Gaps = 18/439 (4%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   FD MI+ K  P +  +TIL+  L    +     S+F+ + ++G+ P+L+  N ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK+     A  +   +L     PN VTF  LI+GLC    ++ A +    +  F   
Sbjct: 271 DGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+  +N LI+G C+  N   AL L  E+  E   I  PDV TY+ +I GLC    +++A
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEI--EKHEIL-PDVFTYSILIKGLCGVDRMEEA 387

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL +MK +   PN +TYN+LI G+C   + ++A  +  +M + G++P+++TF+ +I+ 
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK GKM+    L   M+ +G+ PD V Y +L+DG    G    A  L   M   G   +
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507

Query: 364 VYSYNILINANCKDQKVEDAVCLY-------------REMLSERIRPSVITYNTLLSGLF 410
           V++ + LI+  CKD ++ DA+ L+              E+      P+ + Y  L+ GL 
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLC 567

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-IRNCKCELRI 469
             G +  A K    M+ + + PD FT    I G  +    L  V + QA I         
Sbjct: 568 TDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR-AMHLRDVMMLQADILKMGIIPNS 626

Query: 470 ETYNCLINGLCKMGRLKTA 488
             Y  L  G  + G LK+A
Sbjct: 627 SVYRVLAKGYEESGYLKSA 645



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 142/556 (25%), Positives = 238/556 (42%), Gaps = 69/556 (12%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN++  EA+     + K +  P + +++IL+  L    + +    L + +   G  P+
Sbjct: 345 KAGNLS--EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N LI+  CK G    A  V  ++      PN +TF+ LI+G C  G++  A  L+ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++ +    P+VV +  LI+G  +  NT  A +L +EM     A   P+V T + +IDGLC
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE---AGLHPNVFTLSCLIDGLC 519

Query: 236 KDGFVDKAKELLLQMK------------DRNI-NPNVITYNSLICGFCCVDDWKEAKCLF 282
           KDG +  A +L L               DR++ +PN + Y +LI G C      +A   F
Sbjct: 520 KDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFF 579

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M  +G++PDV T   +I  + +   +  V  L   +++ G+ P++  Y  L  G+   
Sbjct: 580 SDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEES 639

Query: 343 GRISRAREL---FVSMVSKGCRHDVYSYNILINANCKDQ---KVEDAVCLYREMLSERIR 396
           G +  A       V  + +       SY I      + Q     E   C    + +  I 
Sbjct: 640 GYLKSALSFCGEGVQPLDRVNSEPWGSYTI----RSRFQLCVVTEKKECHSSYLTAFGIH 695

Query: 397 PSVITY-----------NTLLSGLFQVGNLGD-----ALKLIDKMQLNDVVPDSFTFATY 440
             V+ +           + +L  +  +G  GD     AL+L  +MQ++D  PD  T    
Sbjct: 696 SFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVA 755

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           +      G +     +   IR+   +  +   N LIN   K G + TA +LF   Q K  
Sbjct: 756 LSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKK-- 813

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN----------------CVPSEVTFCT 544
             DV T ++MI      GQ ++A  L  +M+  N                 +P++VTF  
Sbjct: 814 --DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMG 871

Query: 545 LL-----RGFVQNNKK 555
           +L      G V+  K+
Sbjct: 872 VLMACSHAGLVEEGKQ 887



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 112/498 (22%), Positives = 180/498 (36%), Gaps = 53/498 (10%)

Query: 34  TDLSSHHFKDGTSIAKF-LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLA 92
           T L   HFKDG +   F L+   +   +  N  V+   C+I      G  S  I L  LA
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPN--VFTLSCLIDGLCKDGRISDAIKL-FLA 533

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           K    DT  S    L+ +   P+  +   LI  LC  G    A      +  S   P+  
Sbjct: 534 KTGT-DTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVF 592

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T   +I G      + +   L   +      PN   +  L  G   +     AL    E 
Sbjct: 593 TCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEG 652

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE---------------LLLQMKD--RNI 255
           V     +      +Y   I    +   V + KE               LL       +  
Sbjct: 653 VQPLDRVNSEPWGSYT--IRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPP 710

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           +P+ I       G        +A  LF +M  +  QPD+VT    ++     G +D    
Sbjct: 711 SPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEW 770

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           +   +  RG++ D    NSL++ +   G I  AR LF     K    DV ++  +I  + 
Sbjct: 771 IHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHA 826

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
              + E+A+ L+ EM     R      N         G    +L          V+P+  
Sbjct: 827 LHGQAEEALQLFTEMKETNKRARKNKRN---------GEXESSL----------VLPNDV 867

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIR-NCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           TF   +      G V E  Q F++++ +     RI  + C+++ LC+ G L  A +   +
Sbjct: 868 TFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILK 927

Query: 495 LQHKGPI-PDVVTCSTMI 511
           +    P+ P+ V   T++
Sbjct: 928 M----PVRPNAVVWRTLL 941


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 170/572 (29%), Positives = 295/572 (51%), Gaps = 38/572 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G++  N+A   F+ M++   SP ++++  ++  L K +  D   ++ +++   G+ PD
Sbjct: 228 KEGDV--NKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +  N LI      G    A  V  ++      P+ VT N L+  LC  G+I +A  +F 
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVAL-KLFEEMVNE--------FGAICK----- 221
            + +     ++ ++  ++NG   T+  LV L +LF  M+++        F  + K     
Sbjct: 346 SMAMKGQKTDIFSYKIMLNGYA-TKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKC 404

Query: 222 -------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
                              PDVVTY+++I  LC+ G +D A E   QM D+ + P++ TY
Sbjct: 405 GMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTY 464

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + LI GFC   D  +AK L ++MM+ G++PD+  FN +IN  CK G++     + +  I 
Sbjct: 465 HFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTIS 524

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G++P+ + YN+LMDG+CLVG++  A  +F  MVS G + +V  Y  L+N  CK  ++++
Sbjct: 525 IGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDE 584

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
            + L+RE+L + I+PS   YN +L GLFQ G    A     +M  + +  D +T++  + 
Sbjct: 585 GLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLG 644

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GL KN    EA+ +F+ +     ++ I T N +I G+ ++ R++ A  LF  +   G +P
Sbjct: 645 GLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVP 704

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC-VPSEVTFCTLLRGFVQNNKKSKVVVL 561
            VVT S M+  L KEG +++A+D+   ME   C  P+      ++R  ++  +  +    
Sbjct: 705 SVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTY 764

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           L K+  E+    D S ++ ++DL S     RE
Sbjct: 765 LSKI-DERSFSLDHSTTTLLIDLFSSKGTCRE 795



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 166/585 (28%), Positives = 285/585 (48%), Gaps = 23/585 (3%)

Query: 30  PNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMI-KMKPSPGMTSFTILL 88
           P+P+    + H    T+ A     R + G     EA   FD ++ +  P PG      L 
Sbjct: 20  PSPR----APHLALATATA-----RVRKGTFRPEEAHDLFDELLHQATPVPGRQLNGFLA 70

Query: 89  TMLAKNKQYD------TVVSLFKRLN-SNG---LFPDLFVLNLLINCLCKMGITSGAFVV 138
            +                V+LF R++ ++G   L P L    +L++C  +          
Sbjct: 71  ALARAPASAACRDGPALAVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAF 130

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLC 197
            G++L++    +T+  + L+ GLC   R  EA   L  ++    C P+V ++  ++  LC
Sbjct: 131 FGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLC 190

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
             R +  A +L   M+ E GA+C P+ V YN++IDG  K+G V+KA +L  +M  R I+P
Sbjct: 191 SDRKSGQADELL-RMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISP 249

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           ++ TYN ++   C      +A+ +  +M+D GV PD  T+N++I      G+  +  R+ 
Sbjct: 250 DLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVS 309

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M  +G+ PD VT NSLM   C  G+I  AR++F SM  KG + D++SY I++N     
Sbjct: 310 KKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATK 369

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             + D   L+  MLS+ I P    +N L+    + G L  A  + ++M+   V PD  T+
Sbjct: 370 GCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTY 429

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           +T I  LC+ G + +AV+ F  + +      I TY+ LI G C  G L  A  L  ++ +
Sbjct: 430 STVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMN 489

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           KG  PD+   + +I+ LCK G++  A ++     +    P+ + + TL+ G+    K   
Sbjct: 490 KGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMEN 549

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            + +   M +   +  ++ +   +V+   K  +  E L+ FR +L
Sbjct: 550 ALRVFDVMVSAG-IQPNVVVYGTLVNGYCKVGRIDEGLSLFREIL 593



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 153/562 (27%), Positives = 269/562 (47%), Gaps = 42/562 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           SP + ++ IL+    +  +    ++ F ++   GL  D  +++ L+  LC+   T+ A  
Sbjct: 105 SPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALD 164

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           ++L R+      P+  ++  ++  LC++ +  +A  L + +      C PN V +NT+I+
Sbjct: 165 ILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVID 224

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A  LF EMV        PD+ TYN +++ LCK   +DKA+ +L QM D+ 
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRG---ISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + P+  TYNSLI G+     WKEA  +  +M   G+ PDVVT N+++   CK GK+    
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + M  +G   D  +Y  +++G+   G +    ELF  M+S G   D + +N+LI A 
Sbjct: 342 DVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAY 401

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K   ++ A  ++ EM  + + P V+TY+T+++ L ++G + DA++  ++M    V P  
Sbjct: 402 AKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSI 461

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR---------- 484
            T+   I G C +G +L+A  +   + N      I  +N +IN LCK+GR          
Sbjct: 462 STYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDF 521

Query: 485 -------------------------LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
                                    ++ A ++F  +   G  P+VV   T+++  CK G+
Sbjct: 522 TISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGR 581

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +D+   L  ++  K   PS   +  +L G  Q  +     V  H+M  E  +  D    S
Sbjct: 582 IDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEM-TESGIAMDRYTYS 640

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            V+  L K+    E +  F+ L
Sbjct: 641 IVLGGLFKNSCSDEAILLFKEL 662


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 158/518 (30%), Positives = 280/518 (54%), Gaps = 18/518 (3%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +  +EA+   + M++   SP + ++T+++  L+K  + +    +F  +  NG  PD
Sbjct: 123 KAGRL--DEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPD 180

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSC----FTPNTVTFNFLINGLCAEGRIMEAA 171
            FV   LI+ L K+G    A V L +++ +       P+ V  N +I  LCA G + +A 
Sbjct: 181 AFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDAL 240

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
             F +L+  + D    TFN L+  LC+   T  A+   ++M       C P + TY S++
Sbjct: 241 AYFDELDD-SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERR---CFPTLFTYTSLV 296

Query: 232 DGLCKDGFVDKAKELLLQMKD---RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           DG  K G +D+A   LLQ+K+   R   P+ +TY S+I G C +   +E    F EM + 
Sbjct: 297 DGFLKLGRLDEA---LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNR 353

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G +PD VT+ A+I+   K   + K +R+   M+Q G    TVTYN ++DG C  GR++ A
Sbjct: 354 GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 413

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
              F++M  +GC   V +Y+ L++  C +  V  AV L+R ML     P++++YN ++ G
Sbjct: 414 YATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRG 473

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN-GFVLEAVQVFQAIRNCKCEL 467
           L + G L  A    +K+    + PD +TF +++ GLC+    V + V++F+++ +     
Sbjct: 474 LCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSP 533

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + +Y+ L++G+C+ G L+   ++FH +  +G  PDVV  +T+I WLC  G++D+A ++ 
Sbjct: 534 NLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVF 593

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            ++E ++  P   ++ +LL    +  +  +  +L   M
Sbjct: 594 RELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHM 630



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 147/456 (32%), Positives = 243/456 (53%), Gaps = 13/456 (2%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D  V   L+N LCK G    A ++L  +   C +P+ V F  +INGLC E R+ EA  + 
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEM--PC-SPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           ++     C+P+ VT+N  I+GLC+      A +L ++M  +    C P  VTY +++DGL
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEK---KCLPTTVTYTALVDGL 121

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
            K G +D+A  +L QM ++  +P + TY  +I G       +EA+ +F++M+ NG +PD 
Sbjct: 122 LKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDA 181

Query: 295 VTFNAMINYNCKDGKMDK----VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
             + A+I+   K GK+D+    +N+++E    RGV PD V +N ++   C  G +  A  
Sbjct: 182 FVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALA 241

Query: 351 LFVSMV-SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            F  +  S    H  +++N L+ A CK ++ E+A+   ++M   R  P++ TY +L+ G 
Sbjct: 242 YFDELDDSLDLTH--FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGF 299

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            ++G L +AL  + +      +PD+ T+ + IDGLCK G V E  + F  +RN   E   
Sbjct: 300 LKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 359

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY  LI+G  K   +  A +++ ++   G +   VT + ++  LCK G++ +A    L 
Sbjct: 360 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 419

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           ME + CV + VT+  L+ GF      S  V L  +M
Sbjct: 420 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 249/507 (49%), Gaps = 13/507 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN   K+G +  + A+   D   +M  SP M +FT+++  L + K+ D   S+ +R   
Sbjct: 15  LLNGLCKTGQL--DRAMLLLD---EMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G  PD    N+ I+ LCK      AF +L ++      P TVT+  L++GL   GR+ E
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  + +++      P + T+  +I+GL +      A ++F +M+   G  C+PD   Y +
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML---GNGCRPDAFVYTA 186

Query: 230 IIDGLCKDGFVDKAKELLLQMKD----RNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           +I GL K G +D+A   L QM +    R + P+V+ +N +I   C   + ++A   F E+
Sbjct: 187 LISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL 246

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
            D+ +     TFN ++   CK  + ++    ++ M +R   P   TY SL+DGF  +GR+
Sbjct: 247 -DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRL 305

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A       V +G   D  +Y  +I+  CK  +VE+    + EM +    P  +TY  L
Sbjct: 306 DEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAAL 365

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + G  +   +  A ++  +M  +  V  + T+   +DGLCK G V EA   F A+    C
Sbjct: 366 IDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGC 425

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
              + TY+ L++G C  G +  A +LF R+  +G  P++V+ + +I  LC+ G++ KA  
Sbjct: 426 VATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYF 485

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQN 552
               +  +   P   TF + L G  Q 
Sbjct: 486 YFEKLLQRRLCPDVYTFNSFLHGLCQR 512



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 209/413 (50%), Gaps = 12/413 (2%)

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
             L+NGLC+T     A+ L +EM       C PD+V +  +I+GLC++  +D+A  +L +
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMP------CSPDMVAFTVVINGLCREKRLDEAFSVLER 66

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
                  P+ +TYN  I G C  +   +A  L  +M +    P  VT+ A+++   K G+
Sbjct: 67  AVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGR 126

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+   +LE M+++G +P   TY  ++DG    GR+  AR +FV M+  GCR D + Y  
Sbjct: 127 LDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTA 186

Query: 370 LINANCKDQKVEDAVCLYREML----SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           LI+   K  K+++A+    +M+    +  + P V+ +N ++  L   GNL DAL   D++
Sbjct: 187 LISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL 246

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
             + +    FTF   +  LCK     EA+   + +   +C   + TY  L++G  K+GRL
Sbjct: 247 D-DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRL 305

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A         +G IPD VT +++I  LCK G++++  +   +M  +   P  VT+  L
Sbjct: 306 DEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAAL 365

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           + GF++     K   +  +M     VVS ++ +  ++D L K  +  E    F
Sbjct: 366 IDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI-ILDGLCKAGRVAEAYATF 417



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 143/288 (49%), Gaps = 7/288 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   ++  L+    K K       +++++  +G        N++++ LCK G  + A+ 
Sbjct: 356 EPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYA 415

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
               +         VT++ L++G C+EG +  A  LF+++    C+PN+V++N +I GLC
Sbjct: 416 TFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLC 475

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD-GFVDKAKELLLQMKDRNIN 256
           R      A   FE+++     +C PDV T+NS + GLC+    V    EL   M  +  +
Sbjct: 476 RAGKLAKAYFYFEKLLQR--RLC-PDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTS 532

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN+ +Y+ L+ G C     +    +F EM+  GV PDVV FN +I + C  G++D+   +
Sbjct: 533 PNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEV 592

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC--RH 362
              + +R   PD  +Y SL+D      R+  AR L   M  +GC  RH
Sbjct: 593 FRELERRSA-PDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPRH 639


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 171/542 (31%), Positives = 275/542 (50%), Gaps = 22/542 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  MI     P   +F ILL  L ++ Q +    L  R+   G  PD  + N L
Sbjct: 24  DKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNAL 83

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K      AF  L  ++++   P  VT+  +++GLC   R  +A +L  ++    C
Sbjct: 84  ISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGC 143

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+N ++ GLC  R    A K+ EEM    G    PDVVTYNS I GLCK   VD+
Sbjct: 144 SPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR-GYF--PDVVTYNSFIKGLCKCDRVDE 200

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++ L +M    + P+V++Y ++I G C   D   A  +   M + G  PDVVT++++I+
Sbjct: 201 ARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLID 257

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++++   LL+ M++ G  P+ V YNSL+     +G I +A ++ V M  +G   
Sbjct: 258 GFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTP 317

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS----------VITYNTLLSGLFQV 412
           DV SYN  I+  CK ++V+ A  ++  M+     P+          ++ Y  LL GL + 
Sbjct: 318 DVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKG 377

Query: 413 GNLGDALKLIDKMQLNDVV--PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           G   +A  L  K+ L++ +  PD F +   +D  CK   + +A+Q+ + +    C   + 
Sbjct: 378 GRFDEACALFSKV-LDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVV 435

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           T+N L++GLC   RL  A  +   +  +G IPD VT  T++  +CK G+   A +L  + 
Sbjct: 436 TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEA 495

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD--LSLSSKVVDLLSKD 588
               CVP  VT+  L+ G V  N   +  +L  K+   + V  D  L L  + + LL+K 
Sbjct: 496 VKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKP 555

Query: 589 KK 590
           +K
Sbjct: 556 RK 557



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 162/501 (32%), Positives = 247/501 (49%), Gaps = 19/501 (3%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G   ++F  N L+  L +      A  V   ++     P+  TF  L+ GLC   ++ +A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
            +L  ++    C P+   +N LI+G  + ++   A K   EMV      C P VVTY +I
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH---CLPTVVTYTNI 118

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           +DGLCK      A +LL +M+D+  +PN+ TYN ++ G C      EAK +  EM   G 
Sbjct: 119 VDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 178

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PDVVT+N+ I   CK  ++D+  + L  M    V PD V+Y ++++G C  G +  A  
Sbjct: 179 FPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASR 235

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +   M ++GC  DV +Y+ LI+  CK  +VE A+ L   ML    RP+++ YN+LL  L 
Sbjct: 236 MLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           ++G++G A  ++ +M+     PD  ++   IDGLCK   V +A  VF  +    C     
Sbjct: 296 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 355

Query: 471 TYNCLI----------NGLCKMGRLKTACKLFHR-LQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +Y+ LI          +GLCK GR   AC LF + L  K   PDV   + M+   CK  Q
Sbjct: 356 SYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 415

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +DKA  +   M  KNC  + VT+  L+ G   +++ S    +L  M  E   + D     
Sbjct: 416 IDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGF-IPDFVTYG 473

Query: 580 KVVDLLSKDKKYRECLNQFRH 600
            +VD + K  K    L  F  
Sbjct: 474 TLVDAMCKCGKSAAALELFEE 494



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 231/443 (52%), Gaps = 33/443 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +AV   D M     SP + ++ +++  L + ++ D    + + +   G FPD+   N 
Sbjct: 128 TRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            I  LCK      A   L R+     TP+ V++  +INGLC  G +  A+R+   ++   
Sbjct: 188 FIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG 244

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P+VVT+++LI+G C+      A+ L + M+ + G  C+P++V YNS++  L + G + 
Sbjct: 245 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSML-KLG--CRPNMVAYNSLLGALHRLGHIG 301

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA+++L++M+ R   P+V++YN+ I G C  +  K+AK +F  M++ G  P+  +++ +I
Sbjct: 302 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLI 361

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGC 360
                                     D + Y  L+DG C  GR   A  LF  ++  K C
Sbjct: 362 -------------------------VDILLYTVLLDGLCKGGRFDEACALFSKVLDEKIC 396

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             DV+ YN++++++CK ++++ A+ ++++ML E+   +V+T+N L+ GL     L DA  
Sbjct: 397 EPDVFFYNVMLDSHCKRRQIDKALQIHKQML-EKNCCNVVTWNILVHGLCVDDRLSDAET 455

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           ++  M     +PD  T+ T +D +CK G    A+++F+      C   + TY+ LI GL 
Sbjct: 456 MLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV 515

Query: 481 KMGRLKTACKLFHRLQHKGPIPD 503
                + A  LF +L  +  +PD
Sbjct: 516 HENMAEEAYLLFTKLVERRWVPD 538


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 158/531 (29%), Positives = 277/531 (52%), Gaps = 11/531 (2%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           T I + L DR + G     EA+   D M+     P + ++T+LL  + K+  +   + + 
Sbjct: 180 TPIIRGLCDRGRVG-----EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 234

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
             + + G  P++   N++IN +C+ G    A   L R+    F P+TV++  ++ GLCA 
Sbjct: 235 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 294

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
            R  +   LF ++    C PN VTF+ L+   CR      A+++ E+M    G  C  + 
Sbjct: 295 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS---GHGCAANT 351

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
              N +I+ +CK G VD A + L  M     +P+ I+Y +++ G C  + W++AK L  E
Sbjct: 352 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 411

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+     P+ VTFN  I   C+ G +++   L+E M + G   + VTYN+L++GFC+ GR
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 471

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A ELF SM    C+ +  +Y  L+   C  ++++ A  L  EML +   P+V+T+N 
Sbjct: 472 VDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 528

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+S   Q G + +A++L+++M  +   P+  T+ T +DG+ K+    EA+++   + +  
Sbjct: 529 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 588

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I TY+ +I  L +  R++ A K+FH +Q  G  P  V  + ++  LCK    D A 
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 648

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           D    M +  C+P+E+T+ TL+ G    +   +   LL ++ +  ++  +L
Sbjct: 649 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNL 699



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/500 (31%), Positives = 253/500 (50%), Gaps = 10/500 (2%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L  R  S G  PD+++   LI  LC+ G TS A  VL    RS    +   +N L+ G C
Sbjct: 96  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G++  A RL   + V    P+  T+  +I GLC       AL L ++M++     C+P
Sbjct: 156 RYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG---CQP 209

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            VVTY  +++ +CK     +A E+L +M+ +   PN++TYN +I G C      +A+   
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             +   G QPD V++  ++   C   + + V  L   M+++   P+ VT++ L+  FC  
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G + RA ++   M   GC  +    NI+IN  CK  +V+DA      M S    P  I+Y
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 389

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            T+L GL +     DA +L+ +M   +  P+  TF T+I  LC+ G + +A  + + +  
Sbjct: 390 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
             CE+ I TYN L+NG C  GR+ +A +LF+ +  K   P+ +T +T++  LC   ++D 
Sbjct: 450 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDA 506

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A +LL +M  K+C P+ VTF  L+  F Q     + + L+ +M  E     +L   + ++
Sbjct: 507 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM-MEHGCTPNLITYNTLL 565

Query: 583 DLLSKDKKYRECLNQFRHLL 602
           D ++KD    E L     L+
Sbjct: 566 DGITKDCNSEEALELLHGLV 585



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 239/494 (48%), Gaps = 13/494 (2%)

Query: 89  TMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT 148
           T++A   +Y  + +  + + S  + PD +    +I  LC  G    A  +L  +L     
Sbjct: 149 TLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ VT+  L+  +C      +A  +  ++    C PN+VT+N +ING+CR      A + 
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA-RE 267

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F   ++ +G   +PD V+Y +++ GLC     +  +EL  +M ++N  PN +T++ L+  
Sbjct: 268 FLNRLSSYGF--QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           FC     + A  +  +M  +G   +    N +IN  CK G++D   + L  M   G +PD
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           T++Y +++ G C   R   A+EL   MV K C  +  ++N  I   C+   +E A  L  
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 445

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           +M       +++TYN L++G    G +  AL+L   M      P++ T+ T + GLC   
Sbjct: 446 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAE 502

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            +  A ++   +    C   + T+N L++  C+ G +  A +L  ++   G  P+++T +
Sbjct: 503 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 562

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T++  + K+   ++A +LL  + +    P  VT+ +++    + ++  + + + H     
Sbjct: 563 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH----- 617

Query: 569 KLVVSDLSLSSKVV 582
             +V DL +  K V
Sbjct: 618 --IVQDLGMRPKAV 629



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 4/279 (1%)

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +  RL++    RG  PD      L+   C  GR S A  +  +    G   DV++YN L+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              C+  +++ A    R + S  + P   TY  ++ GL   G +G+AL L+D M      
Sbjct: 152 AGYCRYGQLDAA---RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P   T+   ++ +CK+    +A++V   +R   C   I TYN +ING+C+ GR+  A + 
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            +RL   G  PD V+ +T++  LC   + +   +L  +M  KNC+P+EVTF  L+R F +
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
                + + +L +M+      ++ +L + V++ + K  +
Sbjct: 329 GGMVERAIQVLEQMSGHG-CAANTTLCNIVINTICKQGR 366


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 266/507 (52%), Gaps = 5/507 (0%)

Query: 66  VYFFDCMIKMKPSPGMTS--FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           V   + +I M  + G+ +  F +L+    + ++ +     FK L   G    +   N L+
Sbjct: 98  VEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLL 157

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L KMG    A+ V   I RS    N  T N ++N LC + +I +       +      
Sbjct: 158 GGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIF 217

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            ++VT+NTLIN  CR     +  + FE M +  G   KP + TYN++I+GLCK G   +A
Sbjct: 218 ADIVTYNTLINAYCREG---LLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRA 274

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K +  +M    ++P+  TYN+L+   C  +++ EAK +F +M+  GV PD+++F+++I  
Sbjct: 275 KGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGV 334

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           + ++G +D+       M   G+ PD V Y  L++G+C  G +S A E+   M+ +GC  D
Sbjct: 335 SSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALD 394

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN ++N  CK + + DA  L+ EM+   + P   T+ TL+ G  + GN+G AL L  
Sbjct: 395 VVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFG 454

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M   ++ PD  T+   IDG CK   + +A +++  + + K      +Y  L+NG C +G
Sbjct: 455 IMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLG 514

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A +L+  +  KG  P +VTC+T+I   C+ G + KA++ L  M ++   P  +T+ 
Sbjct: 515 FVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYN 574

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           TL+ GFV+     K   L++KM  + L
Sbjct: 575 TLINGFVKGEYMDKAFFLINKMETKGL 601



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/492 (30%), Positives = 253/492 (51%), Gaps = 3/492 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++  L K+ + D V      +   G+F D+   N LIN  C+ G+   AF V+  +
Sbjct: 187 TLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSM 246

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P   T+N +INGLC +GR + A  +F ++      P+  T+NTL+   CR  N 
Sbjct: 247 SGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNF 306

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           L A  +F +M++       PD+++++S+I    ++G +D+A      MK   + P+ + Y
Sbjct: 307 LEAKDIFSDMLHRG---VSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIY 363

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             LI G+C      EA  +  +M++ G   DVV +N ++N  CK   +   N L + M++
Sbjct: 364 TILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVE 423

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RGV PD  T+ +L+ G C  G + +A  LF  M  K  + D+ +YNILI+  CK  ++E 
Sbjct: 424 RGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEK 483

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+ EM+S +I P+ I+Y  L++G   +G + +A +L D+M    + P   T  T I 
Sbjct: 484 ANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIK 543

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G C++G + +A +    + +        TYN LING  K   +  A  L ++++ KG  P
Sbjct: 544 GYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQP 603

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           DVVT + +++  C++G+M +A  +L  M  +   P   T+ TL+ G+V  +   +     
Sbjct: 604 DVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFH 663

Query: 563 HKMAAEKLVVSD 574
            +M     V  D
Sbjct: 664 DEMLQRGFVPDD 675



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 129/370 (34%), Positives = 205/370 (55%), Gaps = 3/370 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F  M+    SP + SF+ L+ + ++N   D  +  F+ + ++GL PD  +  +LI
Sbjct: 308 EAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILI 367

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  C+ G+ S A  +  ++L      + V +N ++NGLC +  + +A  LF ++      
Sbjct: 368 NGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVV 427

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+  TF TLI+G C+  N   AL LF  M  +     KPD+VTYN +IDG CK   ++KA
Sbjct: 428 PDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN---IKPDIVTYNILIDGFCKTTEMEKA 484

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            EL  +M  R I PN I+Y  L+ G+C +    EA  L+ EM+  G++P +VT N +I  
Sbjct: 485 NELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKG 544

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G + K +  L  MI  GV PD++TYN+L++GF     + +A  L   M +KG + D
Sbjct: 545 YCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPD 604

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN+++N  C+  ++++A  + R+M+   I P   TY TL++G     NL +A +  D
Sbjct: 605 VVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHD 664

Query: 424 KMQLNDVVPD 433
           +M     VPD
Sbjct: 665 EMLQRGFVPD 674



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 190/351 (54%)

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           NS++ GL K G+VD A E+  ++    I  NV T N ++   C      + K   I+M  
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQ 213

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G+  D+VT+N +IN  C++G + +   ++  M  +G+ P   TYN++++G C  GR  R
Sbjct: 214 KGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVR 273

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A+ +F  M+S G   D  +YN L+  +C++    +A  ++ +ML   + P +I++++L+ 
Sbjct: 274 AKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIG 333

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
              + G+L  AL     M+ + +VPD+  +   I+G C+NG + EA+++   +    C L
Sbjct: 334 VSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCAL 393

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            +  YN ++NGLCK   L  A  LF  +  +G +PD  T +T+IH  CKEG M KA  L 
Sbjct: 394 DVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLF 453

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
             M  KN  P  VT+  L+ GF +  +  K   L ++M + K+  + +S +
Sbjct: 454 GIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYA 504



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 35/279 (12%)

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D + F+ +I    +  K+++     +++ ++G        NSL+ G   +G +  A E++
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             +   G   +VY+ NI++NA CKD K++D            ++P +I            
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDD------------VKPFLI------------ 209

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
                       M+   +  D  T+ T I+  C+ G + EA +V  ++     +  + TY
Sbjct: 210 -----------DMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTY 258

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N +INGLCK GR   A  +F+ +   G  PD  T +T++   C+     +A D+  DM  
Sbjct: 259 NAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLH 318

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           +   P  ++F +L+    +N    + ++    M    LV
Sbjct: 319 RGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLV 357



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 71/151 (47%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   +D MI+    P + +   ++    ++           ++ S G+ PD    N L
Sbjct: 517 SEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTL 576

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN   K      AF ++ ++      P+ VT+N ++NG C +GR+ EA  + +K+     
Sbjct: 577 INGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGI 636

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
           DP+  T+ TLING     N   A +  +EM+
Sbjct: 637 DPDRSTYTTLINGYVSQDNLKEAFRFHDEML 667



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 1/170 (0%)

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D+  F   I    +   + E    F+ +R     + I   N L+ GL KMG +  A +++
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           + +   G   +V T + M++ LCK+ ++D     L+DME K      VT+ TL+  + + 
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
               +   +++ M+ + L  +  + ++ V++ L K  +Y      F  +L
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNA-VINGLCKKGRYVRAKGVFNEML 282


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 168/567 (29%), Positives = 280/567 (49%), Gaps = 36/567 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A + FD M+    SP + ++  +++ L+K +  D    +  R+  NG  P+    N L
Sbjct: 220 DTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSL 279

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C  G  + A  V  R+ R    P+  T+N L+  LC  GR MEA ++F  +     
Sbjct: 280 LHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGH 339

Query: 183 DPNVVTFNTLINGLCRTRNTLVALK-LFEEMVNE------------FGAICK-------- 221
            PN  T+ TL++G   T  +LV +  L + MV               G   K        
Sbjct: 340 KPNSATYGTLLHGYA-TEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAM 398

Query: 222 ------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                       PD VTY  ++D LC  G VD A     ++    + P+ + + +LI G 
Sbjct: 399 LLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGL 458

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C  D W +A+ L +EM+  G+ P+ + FN ++N+ CK+G + +   + +LM++  V  D 
Sbjct: 459 CARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDV 518

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TYN+L+DG+CL G++  A +L   MV  G + +  +YN +IN  CK+ ++EDA  L+R+
Sbjct: 519 ITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQ 578

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M S+ + P ++TY+T+L GLFQ      A +L   M  + +  D  T+   + GLC+N  
Sbjct: 579 MASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNC 638

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
             +A+++FQ +      L   T+N +I+ L K GR   A  LF  L  +G +P+VVT   
Sbjct: 639 TDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWL 698

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           M+  L ++G +++ +DL L +E   C  +      L+   +Q  +  K  V L K+    
Sbjct: 699 MMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENN 758

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLN 596
             +   +  S V  LL    KY + +N
Sbjct: 759 FSLEASTAESLV--LLVSSGKYDQHIN 783



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 173/600 (28%), Positives = 283/600 (47%), Gaps = 90/600 (15%)

Query: 43  DGTSIAKF----LNDRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQ 96
           DGT +++F    L  R ++      S+ A + FD ++    +  +      L+  A++  
Sbjct: 10  DGTKVSRFNLMKLQGRQEAAAAGTDSHHAHHAFDELLHRPTTSSIVDLNRALSDAARHSP 69

Query: 97  YDTVVSLFKRL---NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVT 153
               +SLF+R+       + P+L   +++I+C  ++G    AF  LGR++RS +T   +T
Sbjct: 70  A-VAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAIT 128

Query: 154 FNFLINGLCAEGRIMEAARL-FKKLNVFACDPNV-------------------------- 186
           F+ L+  LC + R  EA  +  +++ V  C PNV                          
Sbjct: 129 FSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTM 188

Query: 187 --------------VTFNTLINGLCRTRNTL-VALKLFEEMVNEFGAICKPDVVTYNSII 231
                         V++NT+INGL R    L  A  LF++M+++      PDVVTYNSII
Sbjct: 189 MVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQG---LSPDVVTYNSII 245

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
             L K   +DKA  +L++M      PN IT+NSL+ G+C      +A  +F  M  +GV+
Sbjct: 246 SALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVE 305

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PDV T+N ++ Y CK+G+  +  ++ + M++RG  P++ TY +L+ G+   G + +   L
Sbjct: 306 PDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHL 365

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              MV  G + D Y +NILI    K  KV+DA+ L+ +M  + + P  +TY  ++  L  
Sbjct: 366 LDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCM 425

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDG---------------------------- 443
           VG + DA+    ++    + PD+  F   I G                            
Sbjct: 426 VGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIF 485

Query: 444 -------LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
                  LCK G V  A  +F  +     +  + TYN LI+G C  G++  A KL   + 
Sbjct: 486 FNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMV 545

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G  P+ VT +TMI+  CK G+++ A  L   M +K   P  VT+ T+L+G  Q  + +
Sbjct: 546 LDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTA 605



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 243/503 (48%), Gaps = 8/503 (1%)

Query: 23  WCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDR---HKSGNITSNEAVYFFDCMIKMKPSP 79
           +CS G+P N    +     +DG     F  +    +   N  S EA   FD M+K    P
Sbjct: 283 YCSSGKP-NDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKP 341

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
              ++  LL   A       +  L   +  NG+ PD ++ N+LI    K G    A ++ 
Sbjct: 342 NSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLF 401

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
            ++ R    P+TVT+  +++ LC  G++ +A   F +L      P+ V F  LI+GLC  
Sbjct: 402 SKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCAR 461

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A +L  EM+     IC P+ + +N++++ LCK+G V +AK +   M   ++  +V
Sbjct: 462 DKWDKAEELAVEMIGR--GIC-PNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDV 518

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           ITYN+LI G+C      EA  L   M+ +GV+P+ VT+N MIN  CK+G+++    L   
Sbjct: 519 ITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQ 578

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M  +GVNP  VTY++++ G     R + A+EL++ M+  G + D+ +YNI++   C++  
Sbjct: 579 MASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNC 638

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            +DA+ +++ +          T+N ++  L + G   +A  L   +    +VP+  T+  
Sbjct: 639 TDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWL 698

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +  L + G + E   +F ++    C       N L+  L + G ++ A     ++    
Sbjct: 699 MMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENN 758

Query: 500 PIPDVVTCSTMIHWLCKEGQMDK 522
              +  T  +++  L   G+ D+
Sbjct: 759 FSLEASTAESLV-LLVSSGKYDQ 780


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 162/484 (33%), Positives = 259/484 (53%), Gaps = 40/484 (8%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R +SG  +I  N+A+  F  M +  P P +  F+ LL  +AK  +Y+ V+SLF+ L   
Sbjct: 49  ERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEML 108

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  DL+    LI+C C+    S A   LG++++  F                       
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGF----------------------- 145

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
                       +P++VTF +L+NG C       A+ L +++V   G   +P+VV YN+I
Sbjct: 146 ------------EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV---GLGYEPNVVIYNTI 190

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ID LC+ G V+ A ++L  MK   I P+V+TYNSLI        W  +  +  +MM  G+
Sbjct: 191 IDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGI 250

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PDV+TF+A+I+   K+G++ +  +    MIQR VNP+ VTYNSL++G C+ G +  A++
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +   +VSKG   +  +YN LIN  CK ++V+D + +   M  + +     TYNTL  G  
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           Q G    A K++ +M    V PD +TF   +DGLC +G + +A+   + ++  K  + I 
Sbjct: 371 QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII 430

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYN +I GLCK  +++ A  LF  L  KG  PDV+T  TM+  L ++    +A++L   M
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490

Query: 531 EAKN 534
           + ++
Sbjct: 491 QKED 494



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 213/418 (50%), Gaps = 4/418 (0%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++V F+ L+  + +       + LF  +  E   I   D+ ++ ++ID  C+   +  A
Sbjct: 77  PSIVDFSRLLIAIAKLNKYEAVISLFRHL--EMLGISH-DLYSFTTLIDCFCRCARLSLA 133

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
              L +M      P+++T+ SL+ GFC V+ + EA  L  +++  G +P+VV +N +I+ 
Sbjct: 134 LSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDS 193

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G+++    +L+ M + G+ PD VTYNSL+      G    +  +   M+  G   D
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +++ LI+   K+ ++ +A   Y EM+   + P+++TYN+L++GL   G L +A K+++
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            +      P++ T+ T I+G CK   V + +++   +     +    TYN L  G C+ G
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +   A K+  R+   G  PD+ T + ++  LC  G++ KA   L D++    V   +T+ 
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            +++G  + +K      L   +A + +    ++  + ++ L  K + +RE    +R +
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK-RLWREAHELYRKM 490



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 163/327 (49%)

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           + A  L   M + +  P+++ ++ L+     ++ ++    LF  +   G+  D+ +F  +
Sbjct: 61  NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  C+  ++      L  M++ G  P  VT+ SL++GFC V R   A  L   +V  G 
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V  YN +I++ C+  +V  A+ + + M    IRP V+TYN+L++ LF  G  G + +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           ++  M    + PD  TF+  ID   K G +LEA + +  +        I TYN LINGLC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
             G L  A K+ + L  KG  P+ VT +T+I+  CK  ++D    +L  M          
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           T+ TL +G+ Q  K S    +L +M +
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVS 387



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 176/385 (45%), Gaps = 3/385 (0%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL LF +M         P +V ++ ++  + K    +    L   ++   I+ ++ ++ +
Sbjct: 63  ALTLFCDMAESHPL---PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI  FC       A     +MM  G +P +VTF +++N  C   +  +   L++ ++  G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             P+ V YN+++D  C  G+++ A ++   M   G R DV +YN LI           + 
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            +  +M+   I P VIT++ L+    + G L +A K  ++M    V P+  T+ + I+GL
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C +G + EA +V   + +        TYN LING CK  R+    K+   +   G   D 
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
            T +T+    C+ G+   A  +L  M +    P   TF  LL G   + K  K +V L  
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDK 589
           +   K VV  ++ +  +  L   DK
Sbjct: 420 LQKSKTVVGIITYNIIIKGLCKADK 444



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           ++     +  R+ S G+ PD++  N+L++ LC  G    A V L  + +S      +T+N
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I GLC   ++ +A  LF  L +    P+V+T+ T++ GL R R    A +L+ +M  E
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493

Query: 216 FG 217
            G
Sbjct: 494 DG 495


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/539 (30%), Positives = 273/539 (50%), Gaps = 7/539 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  F   M+     P   ++  L+   +   Q+   V +FK +    + PD+  LN L
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL 332

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LCK G    A  V   +      P+  ++  ++NG   +G +++   LF  +     
Sbjct: 333 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++ TFN LI           A+ +F EM +      KP VVTY ++I  LC+ G +D 
Sbjct: 393 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG---VKPHVVTYMTVIAALCRIGKMDD 449

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E   QM D+ + P+   Y+ LI GFC      +AK L  E+M+NG++ D+V F ++IN
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++     + +L +  G++PD V YN LMDG+CLVG++ +A  +F +MVS G   
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V  Y  L+N  CK  ++++ + L+REML + I+PS I YN ++ GLF+ G    A    
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 629

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M  + +  +  T++  + GL KN    EA+ +F+ +R    ++ I T N +I G+ + 
Sbjct: 630 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 689

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            R++ A  LF  +   G +P  VT S MI  L KEG +++A D+   M+   C P     
Sbjct: 690 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLL 749

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             ++R  ++ N+  +    L K+      +  L+ +  +VDL S     RE   Q R L
Sbjct: 750 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT-AMLLVDLFSSKGTCRE---QIRFL 804



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 257/491 (52%), Gaps = 6/491 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           SP   ++ IL+    +  + +  ++ F +L   GL  D  + + L+   C+   T  A  
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           ++L R       P+  ++N L+  LC +G+  +A  L + +      C P+VV +NT+I+
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A  LF+EMV        PD+VTY+S++  LCK   +DKA+  L QM ++ 
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRG---IPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + P+  TYN+LI G+     WKEA  +F EM    + PDVV  N ++   CK GK+ +  
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + M  +G NPD  +Y  +++G+   G +    +LF  M+  G   D+Y++N+LI A 
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 406

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
                ++ A+ ++ EM    ++P V+TY T+++ L ++G + DA++  ++M    VVPD 
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 466

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           + +   I G C +G +L+A ++   I N    L I  +  +IN LCK+GR+  A  +F  
Sbjct: 467 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL 526

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             + G  PD V  + ++   C  G+M+KA  +   M +    P+ V + TL+ G+ +  +
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 586

Query: 555 KSKVVVLLHKM 565
             + + L  +M
Sbjct: 587 IDEGLSLFREM 597



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 181/397 (45%), Gaps = 3/397 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F+ M      P + ++  ++  L +  + D  +  F ++   G+ PD +  + L
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 472

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C  G    A  ++  I+ +    + V F  +IN LC  GR+M+A  +F        
Sbjct: 473 IQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL 532

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ V +N L++G C       AL++F+ MV+   A  +P+VV Y ++++G CK G +D+
Sbjct: 533 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS---AGIEPNVVGYGTLVNGYCKIGRIDE 589

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              L  +M  + I P+ I YN +I G         AK  F EM ++G+  +  T++ ++ 
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 649

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+   D+   L + +    V  D +T N+++ G     R+  A++LF S+   G   
Sbjct: 650 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
              +Y+I+I    K+  VE+A  ++  M +    P     N ++  L +   +  A   +
Sbjct: 710 CAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYL 769

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            K+   +   +  T    +D     G   E ++   A
Sbjct: 770 SKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPA 806



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 38/266 (14%)

Query: 323 RGVNPDTVTYNSLMD-----------------------------------GFCLVGRISR 347
           R ++P + TY  LMD                                   GFC   R   
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 348 ARELFVSMVSK-GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI--RPSVITYNT 404
           A ++ +    + GC  DV+SYNIL+ + C   K   A  L R M        P V+ YNT
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           ++ G F+ G++  A  L  +M    + PD  T+++ +  LCK   + +A    + + N  
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                 TYN LI G    G+ K A ++F  ++ +  +PDVV  +T++  LCK G++ +A 
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFV 550
           D+   M  K   P   ++  +L G+ 
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYA 372



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 4/237 (1%)

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK-LID 423
           Y+Y IL++   +  + E A+  + ++L   +R   I  + LL G  +     +AL  L+ 
Sbjct: 114 YTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLH 173

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ--AIRNCKCELRIETYNCLINGLCK 481
           +      VPD F++   +  LC  G   +A  + +  A     C   +  YN +I+G  K
Sbjct: 174 RTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFK 233

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G +  AC LF  +  +G  PD+VT S+++H LCK   MDKA   L  M  K  +P   T
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           +  L+ G+    +  + V +  +M  + ++   ++L++ ++  L K  K +E  + F
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT-LMGSLCKYGKIKEARDVF 349


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 270/522 (51%), Gaps = 48/522 (9%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI+ + SP + ++ IL+       +    +  F  +  NG  P++   N LI+  CKMG 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              AF +L  +      PN +++N +INGLC EG + EA  + +++      P+ VT+NT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 192 LINGLCRTRNTLVALKLFEEMVNE------------FGAICK------------------ 221
           L+NG C+  N   AL +  EMV                ++CK                  
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 222 --PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             P+  TY ++IDG  + G +++A  +L +M +   +P+V+TYN+ I G C ++  +EA 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            +  EM++ G+ PDVV+++ +I+  C+ G++D+  ++ + M+++GV+PD VTY+SL+ G 
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C + R++ A +L   M+  G   D ++Y  LINA C +  +  A+ L+ EM+ +   P  
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID---------------GL 444
           +TY+ L++GL +     +A +L+ K+   + VP   T+ T I+               G 
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 420

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G + EA +VF+++     +     YN +I+G C+ G L  A  L+  + H G +P  
Sbjct: 421 CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHT 480

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           VT  T+I  L KEG  ++ ++++ D   ++C  +E     +L
Sbjct: 481 VTVITLIKALFKEGMNEEMSEVIGDT-LRSCRLNEAELAKVL 521



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 136/406 (33%), Positives = 230/406 (56%), Gaps = 3/406 (0%)

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           ++RS  +PN  T+N LI G C+ G + +    F ++    C PNVVT+NTLI+  C+   
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A  L + M ++     +P++++YN II+GLC++G + +A E+L +M  +   P+ +T
Sbjct: 61  IDEAFGLLKSMSSKG---MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 117

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           YN+L+ G+C   ++ +A  +  EM+ NGV P VVT+ A+IN  CK   +++     + M 
Sbjct: 118 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            RG+ P+  TY +L+DGF   G ++ A  +   M   G    V +YN  I+ +C  +++E
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           +A+ + +EM+ + + P V++Y+T++SG  + G L  A ++  +M    V PD+ T+++ I
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            GLC+   + EA  + Q + +        TY  LIN  C  G L  A  L   + HKG +
Sbjct: 298 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 357

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           PD VT S +I+ L K+ +  +A  LL  +  +  VPS+VT+ TL+ 
Sbjct: 358 PDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 403



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/396 (33%), Positives = 204/396 (51%), Gaps = 3/396 (0%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNV T+N LI G C        L  F EM       C P+VVTYN++ID  CK G +D+A
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNG---CLPNVVTYNTLIDAYCKMGRIDEA 64

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL  M  + + PN+I+YN +I G C     KEA  +  EM   G  PD VT+N ++N 
Sbjct: 65  FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK+G   +   +   M++ GV+P  VTY +L++  C    ++RA E F  M  +G R +
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y  LI+   +   + +A  +  EM      PSV+TYN  + G   +  + +AL ++ 
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M    + PD  +++T I G C+ G +  A Q+ Q +          TY+ LI GLC+M 
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           RL  AC L   +   G  PD  T +T+I+  C EG ++KA  L  +M  K  +P  VT+ 
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 364

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            L+ G  +  +  +   LL K+  E+ V SD++  +
Sbjct: 365 VLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 400



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 176/311 (56%)

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           ++PNV TYN LI GFC V + ++    F EM  NG  P+VVT+N +I+  CK G++D+  
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            LL+ M  +G+ P+ ++YN +++G C  G +  A E+   M  KG   D  +YN L+N  
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK+     A+ ++ EM+   + PSV+TY  L++ + +  NL  A++  D+M++  + P+ 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+ T IDG  + G + EA ++   +        + TYN  I+G C + R++ A  +   
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  KG  PDVV+ ST+I   C++G++D+A  +  +M  K   P  VT+ +L++G  +  +
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305

Query: 555 KSKVVVLLHKM 565
            ++   L  +M
Sbjct: 306 LTEACDLSQEM 316



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 163/318 (51%), Gaps = 1/318 (0%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+ + V P+V T+N +I   C  G++ K       M + G  P+ VTYN+L+D +C +GR
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           I  A  L  SM SKG + ++ SYN++IN  C++  +++A  +  EM  +   P  +TYNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           LL+G  + GN   AL +  +M  N V P   T+   I+ +CK   +  A++ F  +R   
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                 TY  LI+G  + G L  A ++ + +   G  P VVT +  IH  C   +M++A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            ++ +M  K   P  V++ T++ GF +  +  +   +  +M  EK V  D    S ++  
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM-VEKGVSPDAVTYSSLIQG 299

Query: 585 LSKDKKYRECLNQFRHLL 602
           L + ++  E  +  + +L
Sbjct: 300 LCEMRRLTEACDLSQEML 317


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 158/531 (29%), Positives = 277/531 (52%), Gaps = 11/531 (2%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           T I + L DR + G     EA+   D M+     P + ++T+LL  + K+  +   + + 
Sbjct: 149 TPIIRGLCDRGRVG-----EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 203

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
             + + G  P++   N++IN +C+ G    A   L R+    F P+TV++  ++ GLCA 
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
            R  +   LF ++    C PN VTF+ L+   CR      A+++ E+M    G  C  + 
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS---GHGCAANT 320

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
              N +I+ +CK G VD A + L  M     +P+ I+Y +++ G C  + W++AK L  E
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+     P+ VTFN  I   C+ G +++   L+E M + G   + VTYN+L++GFC+ GR
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A ELF SM    C+ +  +Y  L+   C  ++++ A  L  EML +   P+V+T+N 
Sbjct: 441 VDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+S   Q G + +A++L+++M  +   P+  T+ T +DG+ K+    EA+++   + +  
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I TY+ +I  L +  R++ A K+FH +Q  G  P  V  + ++  LCK    D A 
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           D    M +  C+P+E+T+ TL+ G    +   +   LL ++ +  ++  +L
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNL 668



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 155/500 (31%), Positives = 253/500 (50%), Gaps = 10/500 (2%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L  R  S G  PD+++   LI  LC+ G TS A  VL    RS    +   +N L+ G C
Sbjct: 65  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 124

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G++  A RL   + V    P+  T+  +I GLC       AL L ++M++     C+P
Sbjct: 125 RYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG---CQP 178

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            VVTY  +++ +CK     +A E+L +M+ +   PN++TYN +I G C      +A+   
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             +   G QPD V++  ++   C   + + V  L   M+++   P+ VT++ L+  FC  
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G + RA ++   M   GC  +    NI+IN  CK  +V+DA      M S    P  I+Y
Sbjct: 299 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 358

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            T+L GL +     DA +L+ +M   +  P+  TF T+I  LC+ G + +A  + + +  
Sbjct: 359 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
             CE+ I TYN L+NG C  GR+ +A +LF+ +  K   P+ +T +T++  LC   ++D 
Sbjct: 419 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDA 475

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A +LL +M  K+C P+ VTF  L+  F Q     + + L+ +M  E     +L   + ++
Sbjct: 476 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM-MEHGCTPNLITYNTLL 534

Query: 583 DLLSKDKKYRECLNQFRHLL 602
           D ++KD    E L     L+
Sbjct: 535 DGITKDCNSEEALELLHGLV 554



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 239/494 (48%), Gaps = 13/494 (2%)

Query: 89  TMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT 148
           T++A   +Y  + +  + + S  + PD +    +I  LC  G    A  +L  +L     
Sbjct: 118 TLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ VT+  L+  +C      +A  +  ++    C PN+VT+N +ING+CR      A + 
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA-RE 236

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F   ++ +G   +PD V+Y +++ GLC     +  +EL  +M ++N  PN +T++ L+  
Sbjct: 237 FLNRLSSYGF--QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           FC     + A  +  +M  +G   +    N +IN  CK G++D   + L  M   G +PD
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           T++Y +++ G C   R   A+EL   MV K C  +  ++N  I   C+   +E A  L  
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           +M       +++TYN L++G    G +  AL+L   M      P++ T+ T + GLC   
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAE 471

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            +  A ++   +    C   + T+N L++  C+ G +  A +L  ++   G  P+++T +
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 531

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T++  + K+   ++A +LL  + +    P  VT+ +++    + ++  + + + H     
Sbjct: 532 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH----- 586

Query: 569 KLVVSDLSLSSKVV 582
             +V DL +  K V
Sbjct: 587 --IVQDLGMRPKAV 598



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 145/328 (44%), Gaps = 38/328 (11%)

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           DD  EA  L       G  PDV     +I   C+ G+     R+L    + G   D   Y
Sbjct: 57  DDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAY 116

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N+L+ G+C  G++  AR L  SM       D Y+Y  +I   C   +V +A+ L  +ML 
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
              +PSV+TY  LL  + +    G A++++D+M+     P+  T+   I+G+C+ G V +
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT------ 506
           A +    + +   +    +Y  ++ GLC   R +   +LF  +  K  +P+ VT      
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR 293

Query: 507 -----------------------------CSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
                                        C+ +I+ +CK+G++D A   L +M +  C P
Sbjct: 294 FFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 353

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             +++ T+L+G  +  +      LL +M
Sbjct: 354 DTISYTTVLKGLCRAERWEDAKELLKEM 381



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 5/167 (2%)

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N  L  L    +L +A +L+D+       PD +     I  LC+ G   +A +V +A   
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI-PDVVTCSTMIHWLCKEGQMD 521
               + +  YN L+ G C+ G+L  A     RL    P+ PD  T + +I  LC  G++ 
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAA----RRLIASMPVAPDAYTYTPIIRGLCDRGRVG 162

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +A  LL DM  + C PS VT+  LL    ++    + + +L +M A+
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK 209


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 189/629 (30%), Positives = 298/629 (47%), Gaps = 40/629 (6%)

Query: 3   FKSSHRSFSLASKAGYRCNFWC------SFGRPPNPKTDLS--SHHFKDG---------T 45
           FK +H+ F      G   + +       SF R   P + L   ++    G         T
Sbjct: 127 FKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCT 186

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
            +A F  + ++       EA   F+ M+++   P +++F  LL  L K  +      L  
Sbjct: 187 VVAGFYEENYRV------EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLN 240

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
           ++   G+  +LF  N+ I  LC+ G+ SGA  +L  ++R   TP+ VT+N LI GLC   
Sbjct: 241 KVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNS 300

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK---P 222
            ++EA +   KL     +P+  T+NTLI+G C+      A K+ +      GAICK   P
Sbjct: 301 NVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQ------GAICKGFVP 354

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D  TY S+I+GLC++  +D+A  L      + + P VI YN LI G C      +A  + 
Sbjct: 355 DEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMM 414

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM +NG   D+ T+N +IN  CK G +   N L+   I +G  PD  T+N+L+DG+C  
Sbjct: 415 NEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQ 474

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            ++    ++   M S G   DV +YN ++N   K  K ED +  +  M+ +   P+ ITY
Sbjct: 475 LKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITY 534

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-R 461
           N L   L + G + +AL L+D++    + PD+ +FAT I G   NG +  A Q+F+ +  
Sbjct: 535 NILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGE 594

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
             K      TYN +IN   +   L    KLF  +   G  PD  T   MI   C  G  D
Sbjct: 595 QYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTD 654

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL---VVSDLSLS 578
                LL+M  K  +PS  TF  ++      ++  + V ++H M    +   VV+ +S +
Sbjct: 655 SGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSISEA 714

Query: 579 SKVV----DLLSKDKKYRECLNQFRHLLF 603
            K V     ++ +D   R C+  + + L 
Sbjct: 715 DKKVVAAPKIVVEDLLKRSCITYYAYELL 743



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 154/567 (27%), Positives = 277/567 (48%), Gaps = 8/567 (1%)

Query: 3   FKSSHRSFS-LASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNIT 61
           FK S  ++  +  K G+  NF          + D+ +    +G  I   +    + G + 
Sbjct: 36  FKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNS-LLEGVYIGA-MKSYGRKGKV- 92

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
             EAV  F+ M      P + S+  ++ +L ++  +     +F R+ + G+ PD++   +
Sbjct: 93  -QEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTI 151

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            I   C+      A  +L  ++      N V +  ++ G   E   +EA  LF  +    
Sbjct: 152 RIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIG 211

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V TFN L++ LC+      + +L  +++ +   +C  ++ T+N  I GLC+ G + 
Sbjct: 212 IFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKK--GMCS-NLFTFNIFIQGLCRKGMLS 268

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  +L  +    + P+V+TYN+LICG C   +  EA+    ++++ G++PD  T+N +I
Sbjct: 269 GAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLI 328

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK G +    ++L+  I +G  PD  TY SL++G C    I RA  LF + + KG +
Sbjct: 329 DGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLK 388

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             V  YN+LI   C++  +  A+ +  EM        + TYN +++GL ++G + DA  L
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNL 448

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ++       VPD FTF T IDG CK   +   +Q+   + +      + TYN ++NGL K
Sbjct: 449 MNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSK 508

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             + +   + F  +  KG +P+ +T + +   LCK G++++A DL+ ++  K   P  V+
Sbjct: 509 AVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVS 568

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           F T++ GF  N        L  +M  +
Sbjct: 569 FATIISGFANNGDLKGAYQLFRRMGEQ 595



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 254/510 (49%), Gaps = 4/510 (0%)

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
            +  +    V +F+R++     P +   N ++N L + G    A  V  R+      P+ 
Sbjct: 87  GRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDV 146

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            TF   I   C   R   A RL   +    C  N V + T++ G       + A +LF +
Sbjct: 147 YTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFND 206

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M+   G    PDV T+N ++  LCK G V +++ LL ++  + +  N+ T+N  I G C 
Sbjct: 207 ML-RIGIF--PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCR 263

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
                 A  +   ++  G+ PDVVT+N +I   CK+  + +  + L  ++  G+ PD  T
Sbjct: 264 KGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFT 323

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YN+L+DG+C +G +  A ++    + KG   D ++Y  LIN  C++ +++ A+ L+   L
Sbjct: 324 YNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAAL 383

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
            + ++P+VI YN L+ GL Q G +  AL+++++M  N    D +T+   I+GLCK G V 
Sbjct: 384 GKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVS 443

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A  +            + T+N LI+G CK  +++T  ++ +++   G  PDV+T ++++
Sbjct: 444 DANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVL 503

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           + L K  + +   +    M  K CVP+++T+  L     +  K ++ + L+ ++  + + 
Sbjct: 504 NGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGIT 563

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              +S ++ ++   + +   +     FR +
Sbjct: 564 PDTVSFAT-IISGFANNGDLKGAYQLFRRM 592



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 234/439 (53%), Gaps = 4/439 (0%)

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           +G++ EA  +F++++ + C+P+V+++N ++N L  +     A K+F  M N  G +  PD
Sbjct: 89  KGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKN-VGIV--PD 145

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V T+   I   C+      A  LL  M  +    N + Y +++ GF   +   EA  LF 
Sbjct: 146 VYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFN 205

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +M+  G+ PDV TFN +++  CK G++ +  RLL  ++++G+  +  T+N  + G C  G
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKG 265

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            +S A  +  S++ +G   DV +YN LI   CK+  V +A     ++++  + P   TYN
Sbjct: 266 MLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYN 325

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL+ G  ++G L +A K++        VPD FT+ + I+GLC+N  +  A+ +F A    
Sbjct: 326 TLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK 385

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +  +  YN LI GLC+ G +  A ++ + +   G   D+ T + +I+ LCK G +  A
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           N+L+ D  AK  VP   TF TL+ G+ +  K    + +L+KM +   V  D+   + V++
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG-VTPDVITYNSVLN 504

Query: 584 LLSKDKKYRECLNQFRHLL 602
            LSK  K  + +  F  ++
Sbjct: 505 GLSKAVKNEDLMETFETMV 523



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 187/378 (49%), Gaps = 7/378 (1%)

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG-FVDKAKELLLQMKDRN 254
           L + ++ L AL++F ++  E G   K  ++TY  II  L   G FV  A E +L     +
Sbjct: 14  LKQQKDPLKALEMFNKVKREDGF--KHSLLTYKCIIQKLGFHGNFV--AMENVLAETRMD 69

Query: 255 INPNVI--TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           I+ +++   Y   +  +      +EA  +F  M     +P V+++NA++N   + G   +
Sbjct: 70  IDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQ 129

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
            +++   M   G+ PD  T+   +  FC   R   A  L  +MVS+GC+ +  +Y  ++ 
Sbjct: 130 AHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVA 189

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
              ++    +A  L+ +ML   I P V T+N LL  L + G + ++ +L++K+    +  
Sbjct: 190 GFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCS 249

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           + FTF  +I GLC+ G +  A+ +  ++        + TYN LI GLCK   +  A K  
Sbjct: 250 NLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYL 309

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           H+L + G  PD  T +T+I   CK G +  A  +L     K  VP E T+C+L+ G  QN
Sbjct: 310 HKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQN 369

Query: 553 NKKSKVVVLLHKMAAEKL 570
           ++  + + L +    + L
Sbjct: 370 DEIDRALALFNAALGKGL 387



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 135/303 (44%), Gaps = 8/303 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F  L+    K  + +T + +  ++ S+G+ PD+   N ++N L K          
Sbjct: 459 PDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMET 518

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              ++     PN +T+N L   LC  G++ EA  L  ++      P+ V+F T+I+G   
Sbjct: 519 FETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFAN 578

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   A +LF  M  ++         TYN +I+   +   +   ++L L+M      P+
Sbjct: 579 NGDLKGAYQLFRRMGEQYKV--SHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPD 636

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             TY  +I GFC   +        +EM++ G  P + TF  +IN  C   ++ +   ++ 
Sbjct: 637 TYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIH 696

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+  G+ P+ V   S  D      ++  A ++ V  + K      Y+Y +L +   +D+
Sbjct: 697 FMVHNGIVPEVVNSISEAD-----KKVVAAPKIVVEDLLKRSCITYYAYELLYDG-IRDK 750

Query: 379 KVE 381
           K +
Sbjct: 751 KTQ 753



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 6/201 (2%)

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL---CKNGFVLE 452
           + S++TY  ++  L   GN      ++ + +++  + +S     YI  +    + G V E
Sbjct: 37  KHSLLTYKCIIQKLGFHGNFVAMENVLAETRMD--IDNSLLEGVYIGAMKSYGRKGKVQE 94

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           AV VF+ +    CE  + +YN ++N L + G  K A K+F R+++ G +PDV T +  I 
Sbjct: 95  AVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIK 154

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             C+  +   A  LL +M ++ C  + V +CT++ GF + N + +   L + M     + 
Sbjct: 155 SFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIG-IF 213

Query: 573 SDLSLSSKVVDLLSKDKKYRE 593
            D+S  +K++  L K  + +E
Sbjct: 214 PDVSTFNKLLHTLCKKGEVQE 234


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/490 (31%), Positives = 261/490 (53%), Gaps = 3/490 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M +   +P    + ++L    +   + + V + + L++ G   D+   NL++
Sbjct: 140 DALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVL 199

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N +C  G    A  +L  +      P+ V++N ++ GLC   R      L +++   AC 
Sbjct: 200 NAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACP 259

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+VTFNTLI+ LCR        ++  +M  E G  C PD+  Y +IIDG+CK+G +  A
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMA-EHG--CTPDIRMYATIIDGICKEGHLKVA 316

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E+L +M    + PNV+ YN+L+ G C  + W+E + L  EM D     D VTFN ++++
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C++G +D+V  LLE M+  G  PD +TY ++++GFC  G I  A  L  SM + GC+ +
Sbjct: 377 FCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             SY I++   C  ++  DA  L  +M+ +    + IT+NTL++ L + G +  A++L+ 
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M +N   PD  +++T IDGL K G   EA+++   + N         Y+ + + L + G
Sbjct: 497 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+    ++F  +Q      D V  + +I  LCK G+ ++A + L  M +  CVP+E T+ 
Sbjct: 557 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 616

Query: 544 TLLRGFVQNN 553
            L+RG     
Sbjct: 617 ILIRGLASEG 626



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 235/453 (51%), Gaps = 4/453 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN  T+  ++  LCA GRI +A  +  ++    C P    ++ ++   CR      A+++
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            E++       C  DV   N +++ +C  G VDKA  LL  +      P+V++YN+++ G
Sbjct: 180 LEDL---HARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKG 236

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C    W   + L  EM+     P++VTFN +I+Y C++G  ++V+ +L  M + G  PD
Sbjct: 237 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPD 296

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
              Y +++DG C  G +  A E+   M S G + +V  YN L+   C  ++ E+   L  
Sbjct: 297 IRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM  +      +T+N L+    Q G +   ++L+++M ++  +PD  T+ T I+G CK G
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEG 416

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EAV + +++  C C+    +Y  ++ GLC   R   A  L  ++  +G   + +T +
Sbjct: 417 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFN 476

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I++LCK+G +++A +LL  M    C P  +++ T++ G  +  K  + + LL+ M  +
Sbjct: 477 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 536

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            +  + +  SS +   LS++ +  + +  F ++
Sbjct: 537 GMSPNTIIYSS-IASALSREGRINKVIQMFDNI 568



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 209/424 (49%), Gaps = 3/424 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + S+  +L  L   K++  V  L + +      P++   N LI+ LC+ G+      
Sbjct: 224 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 283

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VL ++     TP+   +  +I+G+C EG +  A  +  ++  +   PNVV +NTL+ GLC
Sbjct: 284 VLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLC 343

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                    +L  EM   F   C  D VT+N ++D  C++G VD+  ELL QM      P
Sbjct: 344 SAERWEETEELLAEM---FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMP 400

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +VITY ++I GFC      EA  L   M   G +P+ +++  ++   C   +      L+
Sbjct: 401 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 460

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             MIQ+G   + +T+N+L++  C  G + +A EL   M+  GC  D+ SY+ +I+   K 
Sbjct: 461 SQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 520

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            K ++A+ L   M+++ + P+ I Y+++ S L + G +   +++ D +Q   +  D+  +
Sbjct: 521 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLY 580

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I  LCK G    A++    + +  C     TY  LI GL   G +K A ++   L  
Sbjct: 581 NAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCS 640

Query: 498 KGPI 501
           KG +
Sbjct: 641 KGAL 644



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 162/341 (47%), Gaps = 3/341 (0%)

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN+++ G C+ G ++ A+ L   +    + PN  TY  ++   C      +A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G  P    ++ ++   C+ G      R+LE +  RG   D    N +++  C  G + 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
           +A  L   + S GC  DV SYN ++   C  ++      L  EM+     P+++T+NTL+
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           S L + G      +++ +M  +   PD   +AT IDG+CK G +  A ++   + +   +
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             +  YN L+ GLC   R +   +L   +  K    D VT + ++ + C+ G +D+  +L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           L  M    C+P  +T+ T++ GF +     + V+LL  M A
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 3/228 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV     M      P   S+TI+L  L   +++     L  ++   G   +    N L
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LCK G+   A  +L ++L +  +P+ ++++ +I+GL   G+  EA  L   +     
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN + ++++ + L R       +++F+ + +      + D V YN++I  LCK G  ++
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQD---TTIRSDAVLYNAVISSLCKRGETER 595

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           A E L  M      PN  TY  LI G       KEA+ +  E+   G 
Sbjct: 596 AIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGA 643



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 2/135 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  ++   K+G   ++EA+   + M+    SP    ++ + + L++  + + V+ 
Sbjct: 506 DLISYSTVIDGLGKAGK--TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +    +  D  + N +I+ LCK G T  A   L  ++ S   PN  T+  LI GL 
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLA 623

Query: 163 AEGRIMEAARLFKKL 177
           +EG + EA  +  +L
Sbjct: 624 SEGFVKEAQEMLTEL 638


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 168/552 (30%), Positives = 257/552 (46%), Gaps = 41/552 (7%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN   K G +   EA+     ++    +P + ++T L+  L K K+      LFK +  
Sbjct: 27  LLNGLCKMGRL--EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL 84

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            GL  D      LI  L + G    A  V   +      P+ VT + +I+GL   GRI  
Sbjct: 85  RGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 144

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A R+FK +      PN V ++ LI+GLC+ R    AL++  +M   F   C PD +TYN 
Sbjct: 145 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF---CTPDTITYNV 201

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC------------------- 270
           +IDGLCK G V+ A+    +M +    P+V TYN LI GFC                   
Sbjct: 202 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTIN 261

Query: 271 ----------CVDDW-------KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
                      + DW       +EA  L  ++  NG  P + T+NA++N  CK G++++ 
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 321

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             LL  ++  G  PD VTY SL+DG     R   A +LF  M  +G   D   Y  LI  
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRE 381

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             +  K+  A  +Y+ M S    P V+T +T++ GL + G +G A+++   M+   + P+
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
              ++  I GLCK   +  A+++   ++   C     TYN LI+GLCK G ++ A   F 
Sbjct: 442 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 501

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +   G  PDV T + +I   CK G  D A  +  DM +  C  + VT+  L+ G  +  
Sbjct: 502 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRR 561

Query: 554 KKSKVVVLLHKM 565
           + +K  +    M
Sbjct: 562 QLTKASLYFQHM 573



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 246/471 (52%), Gaps = 4/471 (0%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           + +  V+L +++ +NG  P +   N L+N LCKMG    A  +L +I+ +  TP+ VT+ 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+GL  E R  EA +LFK++ +     + V +  LI  L +T     A  +++ M + 
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
               C PDVVT +++IDGL K G +  A  +   M+ R + PN + Y++LI G C     
Sbjct: 121 G---CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
             A  +  +M      PD +T+N +I+  CK G ++      + M++ G  PD  TYN L
Sbjct: 178 DCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237

Query: 336 MDGFCLVGRISRARELFVSMVS-KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           + GFC  G    A        +  GC  D+++Y  +++   K++K+E+AV L  ++ +  
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
             P++ TYN LL+GL ++G L +A+ L+ K+  N   PD  T+ + IDGL K     EA 
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 357

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           ++F+ +      L    Y  LI  L + G++  A  ++  +   G +PDVVT STMI  L
Sbjct: 358 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 417

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            K G++  A  +   MEA+   P+EV +  L+ G  +  K    + +L +M
Sbjct: 418 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 468



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/437 (32%), Positives = 221/437 (50%), Gaps = 5/437 (1%)

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           +I EA  L +K+    C P + T+N L+NGLC+      A+ L  ++V+     C PDVV
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG---CTPDVV 57

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TY S+IDGL K+    +A +L  +M  R +  + + Y +LI          +A  ++  M
Sbjct: 58  TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 117

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
             +G  PDVVT + MI+   K G++    R+ + M  RG+ P+ V Y++L+ G C   ++
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A E+   M    C  D  +YN+LI+  CK   VE A   + EML    +P V TYN L
Sbjct: 178 DCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237

Query: 406 LSGLFQVGNLGDAL-KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           +SG  + GN   A   L  +  +N    D  T+   +D L KN  + EAV + + I    
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           C   I TYN L+NGLCKMGRL+ A  L  ++   G  PDVVT +++I  L KE +  +A 
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 357

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            L  +M  +      V +  L+R  +Q  K  +   +   M +   V   ++LS+ ++D 
Sbjct: 358 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLST-MIDG 416

Query: 585 LSKDKKYRECLNQFRHL 601
           LSK  +    +  F+ +
Sbjct: 417 LSKAGRIGAAVRIFKSM 433


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 151/391 (38%), Positives = 233/391 (59%), Gaps = 11/391 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ M+ M+ +P +  F  +L   AK K Y TV SL  RL   G+ PDLF LN+L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNIL 99

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C MG  +  F VL +IL+  + P+TVT N LI GLC +G++ +A     KL     
Sbjct: 100 INCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 159

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V + TLING+C+  +T  A+KL +++    G + KPDVV Y++IID LCK   V +
Sbjct: 160 QLNQVGYGTLINGVCKIGDTRAAIKLLKKID---GRLTKPDVVMYSTIIDALCKYQLVSE 216

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +M  + I+ +V+TYN+LI GFC V   KEA  L   M+   + PDV T+  +++
Sbjct: 217 AYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVD 276

Query: 303 YNCKDGKMDKVNR-------LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
             CK+GK+ +  R       L++ M  RG   D +TY+SL+DG C  G + RA  LF  M
Sbjct: 277 ALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKM 336

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +G R +++++ IL++   K  +++DA  +++++L++    +V TYN +++G  + G L
Sbjct: 337 KDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLL 396

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            +AL ++ KM+ N  +P++FTF T I  L K
Sbjct: 397 EEALTMLSKMEDNGCIPNAFTFETIIIALFK 427



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 208/411 (50%), Gaps = 13/411 (3%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRN-TLVALKLFEEMVNEFGAICKPDVVTY 227
           +A   F ++      P ++ FN +++   + ++ + V+L    E+        +PD+ T 
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTVSLSHRLELKG-----IQPDLFTL 96

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N +I+  C  G +     +L ++  R   P+ +T N+LI G C     K+A     +++ 
Sbjct: 97  NILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLA 156

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G Q + V +  +IN  CK G      +LL+ +  R   PD V Y++++D  C    +S 
Sbjct: 157 QGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSE 216

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A  LF  M  KG   DV +YN LI   C   K+++A+ L   M+ + I P V TY  L+ 
Sbjct: 217 AYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVD 276

Query: 408 GLFQVGNLGDALK-------LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            L + G + +A +       LID+M+      D  T+++ IDGLCKNG +  A+ +F  +
Sbjct: 277 ALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKM 336

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           ++      + T+  L++GL K GRLK A ++F  L  KG   +V T + MI+  CK+G +
Sbjct: 337 KDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLL 396

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           ++A  +L  ME   C+P+  TF T++    + ++  K   LL +M A  L+
Sbjct: 397 EEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 447



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 187/375 (49%), Gaps = 8/375 (2%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P ++ +N I+D   K         L  +++ + I P++ T N LI  FC +        +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 115

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             +++  G  P  VT N +I   C  G++ K     + ++ +G   + V Y +L++G C 
Sbjct: 116 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCK 175

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           +G    A +L   +  +  + DV  Y+ +I+A CK Q V +A  L+ EM  + I   V+T
Sbjct: 176 IGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 235

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YNTL+ G   VG L +A+ L++ M L  + PD +T+   +D LCK G V EA +    + 
Sbjct: 236 YNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVW 295

Query: 462 NCKCELR-------IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           +   E+R       + TY+ LI+GLCK G L  A  LF++++ +G  P++ T + ++  L
Sbjct: 296 DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGL 355

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
            K G++  A ++  D+  K    +  T+  ++ G  +     + + +L KM     + + 
Sbjct: 356 WKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNA 415

Query: 575 LSLSSKVVDLLSKDK 589
            +  + ++ L  KD+
Sbjct: 416 FTFETIIIALFKKDE 430



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 5/151 (3%)

Query: 67  YFFDCMIKMK----PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           Y +D + +M+    P+  +T ++ L+  L KN   D  ++LF ++   G+ P++F   +L
Sbjct: 293 YVWDLIDEMRDRGQPADVIT-YSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTIL 351

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ L K G    A  V   +L   +  N  T+N +ING C +G + EA  +  K+    C
Sbjct: 352 LDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGC 411

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
            PN  TF T+I  L +      A KL  +M+
Sbjct: 412 IPNAFTFETIIIALFKKDENDKAEKLLRQMI 442



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 2/122 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G++  + A+  F+ M      P M +FTILL  L K  +      +F+ L + G   +
Sbjct: 322 KNGHL--DRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLN 379

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N++IN  CK G+   A  +L ++  +   PN  TF  +I  L  +    +A +L +
Sbjct: 380 VYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLR 439

Query: 176 KL 177
           ++
Sbjct: 440 QM 441


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 144/405 (35%), Positives = 234/405 (57%), Gaps = 2/405 (0%)

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           ++R    PN  T+N L+  LCA GR+ EA  +   +    C PN VT+NTL+   CR   
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A ++   M  E  A  KP++VT+NS+++GLCK G ++ A+++  +M    + P+V++
Sbjct: 61  LDGAERVVSLMREEGNA--KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           YN+L+ G+C V    E+  +F EM   G+ PDVVTF ++I+  CK G +++   L+  M 
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           +RG+  + VT+ +L+DGFC  G +  A      M   G +  V  YN LIN  CK  +++
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A  L REM ++R++P V+TY+T++SG  +VGNL  A +L  KM    V+PD+ T+++ I
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            GLC+   + +A ++F+ +     +    TY  LI+G CK G ++ A  L   +  KG +
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           PDVVT S +I+ L K  +  +A+ LL  +  ++ VP  + +  L+
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 403



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/472 (32%), Positives = 251/472 (53%), Gaps = 19/472 (4%)

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           +G+ P+++  N+L+  LC  G    A  V+G +  +   PN VT+N L+   C  G +  
Sbjct: 4   HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 63

Query: 170 AARLFKKLNVFA-CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           A R+   +       PN+VTFN+++NGLC+      A K+F+EMV E  A   PDVV+YN
Sbjct: 64  AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA---PDVVSYN 120

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           +++ G CK G + ++  +  +M  R + P+V+T+ SLI   C   + ++A  L  +M + 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G++ + VTF A+I+  CK G +D     +E M + G+ P  V YN+L++G+C +GR+  A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           REL   M +K  + DV +Y+ +I+  CK   ++ A  L ++ML + + P  ITY++L+ G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L +   L DA +L + M    V PD FT+ T IDG CK G V +A+ +   +        
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD-------VVTCS--------TMIHW 513
           + TY+ LINGL K  R K A +L  +L H+ P+PD       ++ CS         ++  
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            C +G M +A+ +   M  +N       +  L+ G  +     K +    +M
Sbjct: 421 FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQM 472



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 252/498 (50%), Gaps = 19/498 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++   +P + ++ IL+  L    + +  V +   +   G  P+    N L+   C+ G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 132 TSGAFVVLGRILRSC-FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
             GA  V+  +       PN VTFN ++NGLC  GR+  A ++F ++      P+VV++N
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           TL++G C+      +L +F EM    G +  PDVVT+ S+I   CK G +++A  L+ QM
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQR-GLV--PDVVTFTSLIHATCKAGNLEQAVALVAQM 177

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
           ++R +  N +T+ +LI GFC      +A     EM   G+QP VV +NA+IN  CK G+M
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 237

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           D    L+  M  + V PD VTY++++ G+C VG +  A +L   M+ KG   D  +Y+ L
Sbjct: 238 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 297

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I   C+++++ DA  L+  ML   ++P   TY TL+ G  + GN+  AL L D+M    V
Sbjct: 298 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 357

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQV---------------FQAIRNCKCELRIETYNCL 475
           +PD  T++  I+GL K+    EA ++               + A+  C  +   ++   L
Sbjct: 358 LPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVAL 417

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           + G C  G +K A K++  +  +    D    S +IH  C+ G + KA      M     
Sbjct: 418 LKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGF 477

Query: 536 VPSEVTFCTLLRGFVQNN 553
            P+  +  +L+RG  +  
Sbjct: 478 SPNSTSTISLVRGLFEEG 495



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 259/486 (53%), Gaps = 23/486 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT---VVSLFKRLNSNGLFPDLFVL 119
            EAV     M     +P   ++  L+    +  + D    VVSL +        P+L   
Sbjct: 27  EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--EEGNAKPNLVTF 84

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N ++N LCK G   GA  V   ++R    P+ V++N L++G C  G + E+  +F ++  
Sbjct: 85  NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 144

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+VVTF +LI+  C+  N   A+ L  +M  E G   + + VT+ ++IDG CK GF
Sbjct: 145 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM-RERG--LRMNEVTFTALIDGFCKKGF 201

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D A   + +M+   I P+V+ YN+LI G+C +     A+ L  EM    V+PDVVT++ 
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  CK G +D   +L + M+++GV PD +TY+SL+ G C   R++ A ELF +M+  G
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + D ++Y  LI+ +CK+  VE A+ L+ EM+ + + P V+TY+ L++GL +     +A 
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381

Query: 420 KLIDKMQLNDVVPDSFTF---------------ATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           +L+ K+   D VPD+  +                  + G C  G + EA +V+Q++ +  
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +L    Y+ LI+G C+ G ++ A     ++   G  P+  +  +++  L +EG + +A+
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 501

Query: 525 DLLLDM 530
           + + D+
Sbjct: 502 NAIQDL 507



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/389 (34%), Positives = 212/389 (54%), Gaps = 4/389 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNV T+N L+  LC       A+ +  +M    GA C P+ VTYN+++   C+ G +D A
Sbjct: 8   PNVYTYNILVRALCARGRLEEAVGVVGDM---RGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 244 KELLLQMKDR-NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           + ++  M++  N  PN++T+NS++ G C     + A+ +F EM+  G+ PDVV++N +++
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G + +   +   M QRG+ PD VT+ SL+   C  G + +A  L   M  +G R 
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  ++  LI+  CK   ++DA+    EM    I+PSV+ YN L++G  ++G +  A +LI
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M+   V PD  T++T I G CK G +  A Q+ Q +          TY+ LI GLC+ 
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            RL  AC+LF  +   G  PD  T +T+I   CKEG ++KA  L  +M  K  +P  VT+
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 364

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             L+ G  ++ +  +   LL K+  E  V
Sbjct: 365 SVLINGLSKSARTKEAHRLLFKLYHEDPV 393



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 208/373 (55%), Gaps = 2/373 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+V TYN ++  LC  G +++A  ++  M+     PN +TYN+L+  FC   +   A+ +
Sbjct: 8   PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67

Query: 282 FIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
              M + G  +P++VTFN+M+N  CK G+M+   ++ + M++ G+ PD V+YN+L+ G+C
Sbjct: 68  VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
            VG +  +  +F  M  +G   DV ++  LI+A CK   +E AV L  +M    +R + +
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T+  L+ G  + G L DAL  +++M+   + P    +   I+G CK G +  A ++ + +
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
              + +  + TY+ +I+G CK+G L +A +L  ++  KG +PD +T S++I  LC+E ++
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           + A +L  +M      P E T+ TL+ G  +     K +  LH     K V+ D+   S 
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS-LHDEMIRKGVLPDVVTYSV 366

Query: 581 VVDLLSKDKKYRE 593
           +++ LSK  + +E
Sbjct: 367 LINGLSKSARTKE 379



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 217/462 (46%), Gaps = 20/462 (4%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +     V  FD M++   +P + S+  LL+   K       +++F  +   GL PD
Sbjct: 93  KAGRMEGARKV--FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 150

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI+  CK G    A  ++ ++       N VTF  LI+G C +G + +A    +
Sbjct: 151 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 210

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P+VV +N LING C+     +A +L  EM  +     KPDVVTY++II G C
Sbjct: 211 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR---VKPDVVTYSTIISGYC 267

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G +D A +L  +M  + + P+ ITY+SLI G C      +A  LF  M+  GVQPD  
Sbjct: 268 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 327

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+ +CK+G ++K   L + MI++GV PD VTY+ L++G     R   A  L   +
Sbjct: 328 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 387

Query: 356 VSKGCRHDVYSYN---------------ILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             +    D   Y+                L+   C    +++A  +Y+ ML    +    
Sbjct: 388 YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGS 447

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y+ L+ G  + GN+  AL    +M  +   P+S +  + + GL + G V+EA    Q +
Sbjct: 448 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 507

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
             C      E    LI+   K G +     +   +   G +P
Sbjct: 508 LTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 158/317 (49%), Gaps = 36/317 (11%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+ +GV P+V T+N ++   C  G++++   ++  M   G  P+ VTYN+L+  FC  G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 345 ISRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           +  A  +   M  +G  + ++ ++N ++N  CK  ++E A  ++ EM+ E + P V++YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPD------------------------------ 433
           TLLSG  +VG L ++L +  +M    +VPD                              
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 434 -----SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
                  TF   IDG CK GF+ +A+   + +R C  +  +  YN LING CK+GR+  A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +L   ++ K   PDVVT ST+I   CK G +D A  L   M  K  +P  +T+ +L+RG
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 549 FVQNNKKSKVVVLLHKM 565
             +  + +    L   M
Sbjct: 301 LCEEKRLNDACELFENM 317



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 169/351 (48%), Gaps = 18/351 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+   + M K    P +  +  L+    K  + D    L + + +  + PD+   + +
Sbjct: 203 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 262

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK+G    AF +  ++L+    P+ +T++ LI GLC E R+ +A  LF+ +     
Sbjct: 263 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 322

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  T+ TLI+G C+  N   AL L +EM+ + G +  PDVVTY+ +I+GL K     +
Sbjct: 323 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK-GVL--PDVVTYSVLINGLSKSARTKE 379

Query: 243 AKELLLQMKDRNINPNVITYNSLIC---------------GFCCVDDWKEAKCLFIEMMD 287
           A  LL ++   +  P+ I Y++L+                GFC     KEA  ++  M+D
Sbjct: 380 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 439

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
              + D   ++ +I+ +C+ G + K     + M++ G +P++ +  SL+ G    G +  
Sbjct: 440 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 499

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           A      +++     D  +   LI+ N K+  V+  + +   M  + + PS
Sbjct: 500 ADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 154/471 (32%), Positives = 248/471 (52%), Gaps = 3/471 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F  L+  L +  Q  T V + + ++S G+ PD      L+    + G    A  V
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             R+L    +   VT N LING C  GR+ +A    ++      +P+ +T+NT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   ALK+ + MV E      PDV TYN +++ LCK+G +++AK +L QM DR   P+
Sbjct: 299 NDHVGHALKVMDVMVQEG---HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 355

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           + T+N+LI   C  +  +EA  L  ++   GV PDV TFN +IN  CK G      RL E
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M   G  PD VTYN+L+D  C +G++ +A +L   M S GC     +YN +I+  CK  
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM 475

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           ++E+A  ++ +M  + I  + IT+NTL+ GL +   + DA +LI++M    + P++ T+ 
Sbjct: 476 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 535

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +   CK G + +A  + + +     E+ + TY  LINGLCK GR + A K+   ++ K
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           G  P     + ++  L +   +  A  L  +M      P  +T+  + RG 
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 646



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 251/487 (51%), Gaps = 4/487 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV   + M     +P  T+FT L+    +    +  + +  R+   G       +N+LIN
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK+G    A   + + +   F P+ +T+N  +NGLC    +  A ++   +     DP
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T+N ++N LC+      A  +  +MV+     C PD+ T+N++I  LC    +++A 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG---CLPDITTFNTLIAALCTGNRLEEAL 376

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  Q+  + ++P+V T+N LI   C V D   A  LF EM ++G  PD VT+N +I+  
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  GK+ K   LL+ M   G    T+TYN+++DG C   RI  A E+F  M  +G   + 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            ++N LI+  CKD+K++DA  L  +M+SE ++P+ ITYN++L+   + G++  A  +++ 
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  N    D  T+ T I+GLCK G    A++V + +R        + YN ++  L +   
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 616

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK-EGQMDKANDLLLDMEAKNCVPSEVTFC 543
           ++ A  LF  +   G  PD +T   +   LC+  G + +A D +L+M  K  +P   +F 
Sbjct: 617 IRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFR 676

Query: 544 TLLRGFV 550
            L  G +
Sbjct: 677 MLAEGLL 683



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 271/526 (51%), Gaps = 6/526 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +PG   +  ++  L      D +  L   +   G    L V++  ++      +   A  
Sbjct: 71  APGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVD 130

Query: 138 VLGRILRSCF--TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
           ++   L+  F    +TV +N L+N L    ++     ++ ++      P+VVTFNTL+  
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           LCR      A+ + EEM +   A   PD  T+ +++ G  ++G ++ A  +  +M +   
Sbjct: 191 LCRAHQVRTAVIMLEEMSSRGVA---PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGC 247

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           +   +T N LI G+C +   ++A     + + +G +PD +T+N  +N  C++  +    +
Sbjct: 248 SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALK 307

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           ++++M+Q G +PD  TYN +++  C  G++  A+ +   MV +GC  D+ ++N LI A C
Sbjct: 308 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC 367

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
              ++E+A+ L R++  + + P V T+N L++ L +VG+   AL+L ++M+ +   PD  
Sbjct: 368 TGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 427

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+ T ID LC  G + +A+ + + + +  C     TYN +I+GLCK  R++ A ++F ++
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM 487

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             +G   + +T +T+I  LCK+ ++D A +L+  M ++   P+ +T+ ++L  + +    
Sbjct: 488 DLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 547

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            K   +L  M A    V D+     +++ L K  + +  L   R +
Sbjct: 548 KKAADILETMTANGFEV-DVVTYGTLINGLCKAGRTQVALKVLRGM 592



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 185/359 (51%), Gaps = 6/359 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +   EA    + M+     P +T+F  L+  L    + +  + L +++   G+ PD
Sbjct: 333 KNGQL--EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N+LIN LCK+G    A  +   +  S  TP+ VT+N LI+ LC+ G++ +A  L K
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +    C  + +T+NT+I+GLC+      A ++F++M  +   I + + +T+N++IDGLC
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM--DLQGISR-NAITFNTLIDGLC 507

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           KD  +D A EL+ QM    + PN ITYNS++  +C   D K+A  +   M  NG + DVV
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +IN  CK G+     ++L  M  +G+ P    YN ++        I  A  LF  M
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627

Query: 356 VSKGCRHDVYSYNILINANCK-DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
              G   D  +Y I+    C+    +++A     EM+ +   P   ++  L  GL  +G
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 68/314 (21%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + +F IL+  L K       + LF+ + ++G  PD    N LI+ LC +G    A  
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +  +    +T+T+N +I+GLC + RI EA  +F ++++     N +TFNTLI+GLC
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 198 RTRNTLVALKLFEEMVNE--------FGAI----CKP--------------------DVV 225
           + +    A +L  +M++E        + +I    CK                     DVV
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF--- 282
           TY ++I+GLCK G    A ++L  M+ + + P    YN ++      ++ ++A  LF   
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627

Query: 283 ---------------------------------IEMMDNGVQPDVVTFNAMINYNCKDGK 309
                                            +EM+D G  P+  +F  +       G 
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687

Query: 310 MDKVNRLLELMIQR 323
            D   R +E+++++
Sbjct: 688 DDYFIRAIEIIMEK 701


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 157/496 (31%), Positives = 260/496 (52%), Gaps = 14/496 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M +   +P    + + L    +   +   V + + L+  G   D+   NL++
Sbjct: 129 DALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVL 188

Query: 124 NCLCKMGITSGAFVVLGRILRS-CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
             +C  G    A  +L  +L S    P+ V++N ++ GLC   R      L +++    C
Sbjct: 189 QAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGC 248

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-----CKPDVVTYNSIIDGLCKD 237
            PN+VTF+TLI  LCR         LFE  V+E  A      C PDV  Y +IIDG+CK+
Sbjct: 249 PPNIVTFSTLIGHLCRN-------GLFER-VHEVHAQMAEHGCAPDVRMYATIIDGVCKE 300

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             ++ A+ +L +M    ++PNV+ YN+L+ G C  D W+EA+ L  EM D     D VTF
Sbjct: 301 ERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTF 360

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N ++++ C++G +D+V  +LE M++ G  PD +TY ++++GFC  G I  A  L  SM +
Sbjct: 361 NILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAA 420

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            GCR +  SY I++   C  ++  DA  L  +M+ +   P+ +T+NTL++ L + G +  
Sbjct: 421 CGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 480

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A++L+ +M +N   PD  +++T IDGL K G   EA+++   +           Y+ + +
Sbjct: 481 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIAS 540

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
            L   GR+    ++F  +Q      D V  + +I  LCK G+ D+A + L  M +  CVP
Sbjct: 541 ALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVP 600

Query: 538 SEVTFCTLLRGFVQNN 553
           +E T+  L+RG     
Sbjct: 601 NESTYTILIRGLASEG 616



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 228/455 (50%), Gaps = 5/455 (1%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            PN  T+  L+  LCA GRI +A  +   +    C P    ++  +   CR      A+ 
Sbjct: 108 APNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLI 266
           +  ++    G  C  DV   N ++  +C  G VD+A  LL  +       P+V++YN+++
Sbjct: 168 VLRDL---HGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVL 224

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C    W   + L  EM+  G  P++VTF+ +I + C++G  ++V+ +   M + G  
Sbjct: 225 RGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCA 284

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD   Y +++DG C   R+  AR +   M S G   +V  YN L+   C   + E+A  L
Sbjct: 285 PDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGL 344

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             EM  +      +T+N L+  L Q G +   ++++++M  +  +PD  T+ T I+G CK
Sbjct: 345 LAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G + EAV + +++  C C     +Y  ++ GLC   R   A +L  ++  +G  P+ VT
Sbjct: 405 EGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVT 464

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            +T+I++LCK+G +++A +LL  M    C P  +++ T++ G  +     + + LL+ M 
Sbjct: 465 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMV 524

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            + +  + +  SS +   LS + +  + +  F ++
Sbjct: 525 KKGMSPNTIIYSS-IASALSGEGRINKVIQMFENI 558



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 213/438 (48%), Gaps = 4/438 (0%)

Query: 63  NEAVYFF-DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +EAV    D +      P + S+  +L  L   +++  V  L + + + G  P++   + 
Sbjct: 198 DEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFST 257

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI  LC+ G+      V  ++      P+   +  +I+G+C E R+  A  +  ++  + 
Sbjct: 258 LIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG 317

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PNVV +NTL+ GLC       A  L  EM   F   C  D VT+N ++D LC++G VD
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEM---FDKDCPLDDVTFNILVDFLCQNGLVD 374

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +  E+L QM +    P+VITY ++I GFC      EA  L   M   G +P+ V++  ++
Sbjct: 375 RVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVL 434

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C   +      L+  MIQ+G  P+ VT+N+L++  C  G + +A EL   M+  GC 
Sbjct: 435 KGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 494

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+ SY+ +I+   K    ++A+ L   M+ + + P+ I Y+++ S L   G +   +++
Sbjct: 495 PDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQM 554

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            + +Q   V  D+  +   I  LCK G    A++    + +  C     TY  LI GL  
Sbjct: 555 FENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLAS 614

Query: 482 MGRLKTACKLFHRLQHKG 499
            G +K A ++   L  KG
Sbjct: 615 EGFVKEAQEILTELCSKG 632



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 159/341 (46%), Gaps = 5/341 (1%)

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           YN+++ G+C      +            V P+  T+  ++   C  G++     +L+ M 
Sbjct: 82  YNAMVAGYC---RAGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           +RG  P    Y+  ++  C       A  +   +  +GC  DV + N+++ A C    V+
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 382 DAVCLYREML-SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           +AV L R++L S    P V++YN +L GL      G    L+++M      P+  TF+T 
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I  LC+NG      +V   +    C   +  Y  +I+G+CK  RL+ A  + +R+   G 
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P+VV  +T++  LC   + ++A  LL +M  K+C   +VTF  L+    QN    +V+ 
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +L +M  E   + D+   + V++   K+    E +   R +
Sbjct: 379 VLEQM-LEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSM 418



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 2/136 (1%)

Query: 42  KDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVV 101
            D  S +  ++   K+GN  ++EA+   + M+K   SP    ++ + + L+   + + V+
Sbjct: 495 PDLISYSTVIDGLGKAGN--TDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVI 552

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
            +F+ +    +  D  + N +I+ LCK G T  A   L  ++ S   PN  T+  LI GL
Sbjct: 553 QMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGL 612

Query: 162 CAEGRIMEAARLFKKL 177
            +EG + EA  +  +L
Sbjct: 613 ASEGFVKEAQEILTEL 628


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 160/515 (31%), Positives = 268/515 (52%), Gaps = 38/515 (7%)

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
           V      ++  G    L+  N L+  L K  +  GA  +  ++L S   P+ +TFN LIN
Sbjct: 147 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLIN 206

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
            L  +G++ EA  +  ++  +   P+V T+ +LI G CR RN  +A  +F+ MV E    
Sbjct: 207 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG--- 263

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C P+ VTY+++I+GLC +G VD+A ++L +M ++ I P V TY   I   C ++  +EA 
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L   M   G +P+V T+ A+I+   + GK++    L   M++ G+ P+TVTYN+L++  
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C+ GR S A ++F  M   G   +  +YN +I   C    +E A+ L+ +ML     P+V
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF---------------------- 437
           +TYNTL++G    GN+ +A +L+D M+ N   PD +T+                      
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 438 -------------ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
                           IDG  K+G V  A+ + + +    C   +E+YN +INGL K  R
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
              A K+  ++  +G +P+V+T +T+I  LC+ G+   A  +  DME + C+P+  T+ +
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           L+ G  Q  K  +  +LL +M  + L   +++ +S
Sbjct: 624 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 658



 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 165/500 (33%), Positives = 249/500 (49%), Gaps = 5/500 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K G +   EA      + +   SP + ++T L+    +N+  D    +F R+  
Sbjct: 204 LINILSKKGKV--REAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 261

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G  P+    + LIN LC  G    A  +L  ++     P   T+   I  LCA     E
Sbjct: 262 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEE 321

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  L  ++    C PNV T+  LI+GL R     VA+ L+ +M+ E G +  P+ VTYN+
Sbjct: 322 AIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE-GLV--PNTVTYNA 378

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+ LC  G    A ++   M+      N  TYN +I G C   D ++A  LF +M+  G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             P VVT+N +IN     G ++   RLL+LM + G  PD  TYN L+ GF   G++  A 
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
             F  MV  G   +  SY  LI+ + KD KV+ A+ L + M      P+V +YN +++GL
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            +     +A K+ DKM    ++P+  T+ T IDGLC+NG    A ++F  +   KC   +
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY+ LI GLC+ G+   A  L   ++ KG  PD VT +++I      G++D A  LL  
Sbjct: 619 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 678

Query: 530 MEAKNCVPSEVTFCTLLRGF 549
           M    C P+  T+  LL+G 
Sbjct: 679 MVDMGCKPNYRTYSVLLKGL 698



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 224/419 (53%), Gaps = 3/419 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+   + MI+    P + ++T+ +T L   +  +  + L  R+   G  P++     L
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L ++G    A  +  ++L+    PNTVT+N LIN LC  GR   A ++F  +     
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N  T+N +I GLC   +   A+ LFE+M+ + G +  P VVTYN++I+G    G V+ 
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKML-KMGPL--PTVVTYNTLINGYLTKGNVNN 461

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL  MK+    P+  TYN L+ GF      + A   F EM++ G+ P+ V++ A+I+
Sbjct: 462 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALID 521

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
            + KDGK+D    LL+ M + G NP+  +YN++++G     R S A ++   MV +G   
Sbjct: 522 GHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLP 581

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V +Y  LI+  C++ + + A  ++ +M   +  P++ TY++L+ GL Q G   +A  L+
Sbjct: 582 NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILL 641

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            +M+   + PD  TF + IDG    G +  A  + + + +  C+    TY+ L+ GL K
Sbjct: 642 KEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/528 (29%), Positives = 271/528 (51%), Gaps = 18/528 (3%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT------ 99
            + + +  R +SG++  ++A+  FD ++       + +F  +L  +++  +         
Sbjct: 14  ELERIIAARARSGSLGLDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSST 73

Query: 100 -----VVSLFKRLN---SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
                VVSLF R+    S  + P+    ++LI CLC+MG    +F   G IL++ +  N 
Sbjct: 74  SESELVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVND 133

Query: 152 VTFNFLINGLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
           +  N L+ GLC   R+ EA   L +++    C P+ V+++ L+ G C       AL+L  
Sbjct: 134 IVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLR 193

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
            M N+ G  C P+VVTY ++IDGLCK    D+A+ +  QM D  + PN  TYN LI G+ 
Sbjct: 194 MMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYL 253

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            +  WKE   +  +M   G++PD  T+ +++NY C    + +++  L+LM++ G++PD  
Sbjct: 254 SIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHH 310

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
            +N     +   G I +A ++F  M   G   +V +Y  LI+A CK  +V+DA   + +M
Sbjct: 311 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 370

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           ++E + P+++ +N+L+ GL  V     A +L+ +M    + P++  F T I  LC  G V
Sbjct: 371 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 430

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
           +E  ++   + +        +Y  LI+G C  GR   A K+F  +   G  P  VT +T+
Sbjct: 431 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTL 490

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           +H  C   ++D A  L  +M  K   P  VT+ T+L G  Q  + S+ 
Sbjct: 491 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEA 538



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 168/550 (30%), Positives = 277/550 (50%), Gaps = 33/550 (6%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGLF--PDLFVLNLLINCLCK 128
           M ++  +P   S++ILL       + +  + L + + N +G    P++     +I+ LCK
Sbjct: 160 MPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCK 219

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
             +   A  V  +++ +   PN  T+N LI+G  + G+  E  ++ +K++     P+  T
Sbjct: 220 AQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYT 279

Query: 189 FNTLINGLCRTRNTLVALKLFEE--------MVNEF-------GAICK------------ 221
           + +L+N LC        L L  E        + N F       G I K            
Sbjct: 280 YGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 339

Query: 222 --PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             P+VV Y ++ID LCK G VD A+    QM +  + PN++ +NSL+ G C VD W+ A+
Sbjct: 340 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 399

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L  EM+D G+ P+ V FN +I   C  G++ +  RL++LM   GV PD  +Y  L+ G+
Sbjct: 400 ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGY 459

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           CL GR   A ++F  MVS G      +YN L++  C   +++DA CL+REML + + P V
Sbjct: 460 CLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 519

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TYNT+L GLFQ     +A +L   M  +    D +T+   ++GLCK+  V EA ++FQ+
Sbjct: 520 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQS 579

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           + +   +L I T+  +I  L K GR + A  LF  +   G +P+VVT   +   L +EG 
Sbjct: 580 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 639

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +++ + L   ME     P+      L+R  +     S+    L K+      V + S +S
Sbjct: 640 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSV-EASTTS 698

Query: 580 KVVDLLSKDK 589
            ++ + + D+
Sbjct: 699 LLISIFTSDE 708



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 120/276 (43%), Gaps = 3/276 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E     D M  +   P   S+T L++      + D    +F  + S GL P     N L+
Sbjct: 432 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 491

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C       A+ +   +LR   TP  VT+N +++GL    R  EA  L+  +      
Sbjct: 492 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 551

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            ++ T+N ++NGLC++     A K+F+ + ++     + +++T+  +I  L K G  + A
Sbjct: 552 CDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG---LQLNIITFTIMIGALLKGGRKEDA 608

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L   +    + PNV+TY  +          +E   LF  M  NG  P+    NA++  
Sbjct: 609 MDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 668

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
               G + +    L  + +R  + +  T + L+  F
Sbjct: 669 LLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIF 704



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 11/223 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  M++   +PG+ ++  +L  L + K++     L+  + ++G   D++  N++
Sbjct: 501 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNII 560

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK      AF +   +       N +TF  +I  L   GR  +A  LF  +     
Sbjct: 561 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 620

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDG 238
            PNVVT+  +   L    +        EE  + F A+ K    P+    N+++  L   G
Sbjct: 621 VPNVVTYRLVAENLIEEGS-------LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 673

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
            + +A   L ++ +RN +    T + LI  F   +    AK L
Sbjct: 674 DISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSL 716



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 19/227 (8%)

Query: 395 IRPSVITYNTLLSGLFQVGNLG--DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           +R   +    +++   + G+LG  DALKL D++ ++        F   ++ + +      
Sbjct: 8   VRDRCLELERIIAARARSGSLGLDDALKLFDELLIHARPASVVAFNQILNAVSRASRASG 67

Query: 453 -----------AVQVF-QAIRNCKCELRIET--YNCLINGLCKMGRLKTACKLFHRLQHK 498
                       V +F + +R C  ++   T  Y+ LI  LC+MGRLK +   F  +   
Sbjct: 68  RRSSSTSESELVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKT 127

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLD-MEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           G   + +  + ++  LC   ++ +A D+LL  M    C P  V++  LL+GF   N+  +
Sbjct: 128 GWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEE 187

Query: 558 VVVLLHKMAAE--KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            + LL  MA +  +    ++   + V+D L K + +      F+ ++
Sbjct: 188 ALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMI 234


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 154/471 (32%), Positives = 248/471 (52%), Gaps = 3/471 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F  L+  L +  Q  T V + + ++S G+ PD      L+    + G    A  V
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             R+L    +   VT N LING C  GR+ +A    ++      +P+ +T+NT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   ALK+ + MV E      PDV TYN +++ LCK+G +++AK +L QM DR   P+
Sbjct: 299 NDHVGHALKVMDVMVQEG---HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 355

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           + T+N+LI   C  +  +EA  L  ++   GV PDV TFN +IN  CK G      RL E
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M   G  PD VTYN+L+D  C +G++ +A +L   M S GC     +YN +I+  CK  
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM 475

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           ++E+A  ++ +M  + I  + IT+NTL+ GL +   + DA +LI++M    + P++ T+ 
Sbjct: 476 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 535

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +   CK G + +A  + + +     E+ + TY  LINGLCK GR + A K+   ++ K
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           G  P     + ++  L +   +  A  L  +M      P  +T+  + RG 
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 646



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 251/487 (51%), Gaps = 4/487 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV   + M     +P  T+FT L+    +    +  + +  R+   G       +N+LIN
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK+G    A   + + +   F P+ +T+N  +NGLC    +  A ++   +     DP
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T+N ++N LC+      A  +  +MV+     C PD+ T+N++I  LC    +++A 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG---CLPDITTFNTLIAALCTGNRLEEAL 376

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  Q+  + ++P+V T+N LI   C V D   A  LF EM ++G  PD VT+N +I+  
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  GK+ K   LL+ M   G    T+TYN+++DG C   RI  A E+F  M  +G   + 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            ++N LI+  CKD+K++DA  L  +M+SE ++P+ ITYN++L+   + G++  A  +++ 
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  N    D  T+ T I+GLCK G    A++V + +R        + YN ++  L +   
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 616

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK-EGQMDKANDLLLDMEAKNCVPSEVTFC 543
           ++ A  LF  +   G  PD +T   +   LC+  G + +A D +L+M  K  +P   +F 
Sbjct: 617 IRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFR 676

Query: 544 TLLRGFV 550
            L  G +
Sbjct: 677 MLAEGLL 683



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 246/452 (54%), Gaps = 4/452 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +TV +N L+N L    ++     ++ ++      P+VVTFNTL+  LCR      A+ + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           EEM +   A   PD  T+ +++ G  ++G ++ A  +  +M +   +   +T N LI G+
Sbjct: 205 EEMSSRGVA---PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C +   ++A     + + +G +PD +T+N  +N  C++  +    +++++M+Q G +PD 
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN +++  C  G++  A+ +   MV +GC  D+ ++N LI A C   ++E+A+ L R+
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           +  + + P V T+N L++ L +VG+   AL+L ++M+ +   PD  T+ T ID LC  G 
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A+ + + + +  C     TYN +I+GLCK  R++ A ++F ++  +G   + +T +T
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I  LCK+ ++D A +L+  M ++   P+ +T+ ++L  + +     K   +L  M A  
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             V D+     +++ L K  + +  L   R +
Sbjct: 562 FEV-DVVTYGTLINGLCKAGRTQVALKVLRGM 592



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 216/402 (53%), Gaps = 5/402 (1%)

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKD 237
           +F    + V +N L+N L         +KL E + +E GA   KPDVVT+N+++  LC+ 
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSK----MKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             V  A  +L +M  R + P+  T+ +L+ GF      + A  +   M++ G     VT 
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +IN  CK G+++     ++  I  G  PD +TYN+ ++G C    +  A ++   MV 
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +G   DV++YNI++N  CK+ ++E+A  +  +M+     P + T+NTL++ L     L +
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           AL L  ++ +  V PD +TF   I+ LCK G    A+++F+ ++N  C     TYN LI+
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
            LC +G+L  A  L   ++  G     +T +T+I  LCK+ ++++A ++   M+ +    
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           + +TF TL+ G  ++ K      L+++M +E L  ++++ +S
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 203/414 (49%), Gaps = 20/414 (4%)

Query: 207 KLFEEMVNEFGAICKPDVV-----------------TYNSIIDGLCKDGFVDKAKELLL- 248
           +++EE++ + GA+   D++                   +S +D        D A +L+L 
Sbjct: 75  EVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILN 134

Query: 249 QMKDR-NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
           Q++    I  + + YN L+         K  + ++ EM   G++PDVVTFN ++   C+ 
Sbjct: 135 QLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            ++     +LE M  RGV PD  T+ +LM GF   G I  A  +   M+  GC     + 
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N+LIN  CK  +VEDA+   ++ +++   P  ITYNT ++GL Q  ++G ALK++D M  
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
               PD FT+   ++ LCKNG + EA  +   + +  C   I T+N LI  LC   RL+ 
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  L  ++  KG  PDV T + +I+ LCK G    A  L  +M+   C P EVT+ TL+ 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                 K  K + LL  M +     S ++ ++ ++D L K  +  E    F  +
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNT-IIDGLCKKMRIEEAEEVFDQM 487



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 185/359 (51%), Gaps = 6/359 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +   EA    + M+     P +T+F  L+  L    + +  + L +++   G+ PD
Sbjct: 333 KNGQL--EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N+LIN LCK+G    A  +   +  S  TP+ VT+N LI+ LC+ G++ +A  L K
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +    C  + +T+NT+I+GLC+      A ++F++M  +   I + + +T+N++IDGLC
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM--DLQGISR-NAITFNTLIDGLC 507

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           KD  +D A EL+ QM    + PN ITYNS++  +C   D K+A  +   M  NG + DVV
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +IN  CK G+     ++L  M  +G+ P    YN ++        I  A  LF  M
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627

Query: 356 VSKGCRHDVYSYNILINANCK-DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
              G   D  +Y I+    C+    +++A     EM+ +   P   ++  L  GL  +G
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 68/314 (21%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + +F IL+  L K       + LF+ + ++G  PD    N LI+ LC +G    A  
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +  +    +T+T+N +I+GLC + RI EA  +F ++++     N +TFNTLI+GLC
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 198 RTRNTLVALKLFEEMVNE--------FGAI----CKP--------------------DVV 225
           + +    A +L  +M++E        + +I    CK                     DVV
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF--- 282
           TY ++I+GLCK G    A ++L  M+ + + P    YN ++      ++ ++A  LF   
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627

Query: 283 ---------------------------------IEMMDNGVQPDVVTFNAMINYNCKDGK 309
                                            +EM+D G  P+  +F  +       G 
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687

Query: 310 MDKVNRLLELMIQR 323
            D   R +E+++++
Sbjct: 688 DDYFIRAIEIIMEK 701


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 160/509 (31%), Positives = 271/509 (53%), Gaps = 8/509 (1%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F+D T + K  +   +SGN    E+++  + M++   +P +   T L+      +     
Sbjct: 87  FRD-TQMLKIFHRSCRSGNYI--ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA 143

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           V + + L   G  PD+F  N LIN  CKM     A  VL R+    F+P+TVT+N +I  
Sbjct: 144 VRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
           LC+ G++  A ++  +L    C P V+T+  LI           ALKL +EM++      
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG---L 259

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           KPD+ TYN+II G+CK+G VD+A E++  ++ +   P+VI+YN L+        W+E + 
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L  +M      P+VVT++ +I   C+DGK+++   LL+LM ++G+ PD  +Y+ L+  FC
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GR+  A E   +M+S GC  D+ +YN ++   CK+ K + A+ ++ ++      P+  
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YNT+ S L+  G+   AL +I +M  N + PD  T+ + I  LC+ G V EA ++   +
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           R+C+    + TYN ++ G CK  R++ A  +   +   G  P+  T + +I  +   G  
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +A +L  D+   + + SE +F  L R F
Sbjct: 560 AEAMELANDLVRIDAI-SEYSFKRLHRTF 587



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 224/441 (50%), Gaps = 4/441 (0%)

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           C+ G    +  +L  ++R  + P+ +    LI G      I +A R+ + L  F   P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
             +N LING C+      A ++ + M ++  +   PD VTYN +I  LC  G +D A ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFS---PDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L Q+   N  P VITY  LI          EA  L  EM+  G++PD+ T+N +I   CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G +D+   ++  +  +G  PD ++YN L+      G+     +L   M S+ C  +V +
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y+ILI   C+D K+E+A+ L + M  + + P   +Y+ L++   + G L  A++ ++ M 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            +  +PD   + T +  LCKNG   +A+++F  +    C     +YN + + L   G   
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A  +   +   G  PD +T ++MI  LC+EG +D+A +LL+DM +    PS VT+  +L
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 547 RGFVQNNKKSKVVVLLHKMAA 567
            GF + ++    + +L  M  
Sbjct: 516 LGFCKAHRIEDAINVLESMVG 536



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 192/385 (49%), Gaps = 4/385 (1%)

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR+ N + +L L E MV +      PDV+    +I G      + KA  ++ ++ ++   
Sbjct: 100 CRSGNYIESLHLLETMVRKG---YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQ 155

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+V  YN+LI GFC ++   +A  +   M      PD VT+N MI   C  GK+D   ++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L  ++     P  +TY  L++   L G +  A +L   M+S+G + D+++YN +I   CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           +  V+ A  + R +  +   P VI+YN LL  L   G   +  KL+ KM      P+  T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++  I  LC++G + EA+ + + ++         +Y+ LI   C+ GRL  A +    + 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G +PD+V  +T++  LCK G+ D+A ++   +    C P+  ++ T+      +  K 
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKV 581
           + + ++ +M +  +   +++ +S +
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMI 480


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/444 (35%), Positives = 248/444 (55%), Gaps = 26/444 (5%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  D+  L++LIN    +   + AF VL +IL+  + P+TVT   L+ GLC    + +A
Sbjct: 5   GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKA 64

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
                 +       + V++ TLINGLC++                 G    PD   Y+ I
Sbjct: 65  LHFHDDVIAKGFRLDNVSYGTLINGLCKS-----------------GETKAPDQFMYSMI 107

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           I+ LCKD  V  A +L  +M  + I P+V+TYN+LI GFC V   ++A  LF EM    +
Sbjct: 108 INRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNI 167

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P+V +FN +I+  CK+G +     +L +MI++ V PD VT +SL+DG+ LV + ++AR 
Sbjct: 168 VPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARY 227

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +F +M   G   D+ SYNI+IN   K + V++AV L++EM  + + P  ITY+TL+ GL 
Sbjct: 228 IFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLG 287

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           ++G +     LID+M+      +  T+++ ++ LCK+G    A+++F  I++   E  + 
Sbjct: 288 KLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMV 347

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYN L++GLCK GRLK A ++FH L  KG   DV   + MI+ LC+E   D         
Sbjct: 348 TYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFD--------- 398

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNK 554
           EA  C P+ VT+  ++R   +N+K
Sbjct: 399 EAYGCTPNAVTYEIIIRALFKNDK 422



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 195/382 (51%), Gaps = 17/382 (4%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           ++K+   P   + T LL  L  N +    +     + + G   D      LIN LCK G 
Sbjct: 36  ILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGE 95

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T                P+   ++ +IN LC +  +++A  L+ ++ V    P+VVT+NT
Sbjct: 96  TKA--------------PDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNT 141

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI G C       A++LF EM      I  P+V ++N +IDGLCK+G V   K +L  M 
Sbjct: 142 LIYGFCIVGQLEDAIRLFNEM--RLKNIV-PNVCSFNILIDGLCKEGDVKGGKSVLAVMI 198

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            +++ P+V+T +SLI G+  V    +A+ +F  M  NGV  D+ ++N MIN   K   +D
Sbjct: 199 KQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVD 258

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   L + M  + + PDT+TY++L+DG   +GRIS   +L   M + G   +V +Y+ L+
Sbjct: 259 EAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLL 318

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N  CK    + A+ ++ ++  +   P+++TYN L+ GL + G L DA ++   + +    
Sbjct: 319 NVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYR 378

Query: 432 PDSFTFATYIDGLCKNGFVLEA 453
            D   +   I+GLC+     EA
Sbjct: 379 LDVRLYTVMINGLCREALFDEA 400



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 174/372 (46%), Gaps = 18/372 (4%)

Query: 40  HFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT 99
           HF D      F  D    G + +        C      +P    +++++  L K+K    
Sbjct: 66  HFHDDVIAKGFRLDNVSYGTLINGL------CKSGETKAPDQFMYSMIINRLCKDKLVVD 119

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
              L+  +    +FPD+   N LI   C +G    A  +   +      PN  +FN LI+
Sbjct: 120 AYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILID 179

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
           GLC EG +     +   +   +  P+VVT ++LI+G    +    A  +F  M      I
Sbjct: 180 GLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTI 239

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
              D+ +YN +I+GL K   VD+A  L  +M+ +++ P+ ITY++LI G   +       
Sbjct: 240 ---DLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVW 296

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L  EM   G   +V+T+++++N  CK G  D   R+   +  +G  P+ VTYN L+DG 
Sbjct: 297 DLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGL 356

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  GR+  A+E+F  ++ KG R DV  Y ++IN  C++   ++A             P+ 
Sbjct: 357 CKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAYGC---------TPNA 407

Query: 400 ITYNTLLSGLFQ 411
           +TY  ++  LF+
Sbjct: 408 VTYEIIIRALFK 419



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 174/346 (50%), Gaps = 16/346 (4%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           +PD VT  +++ GLC +  V KA      +  +    + ++Y +LI G C   + K    
Sbjct: 42  QPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETK---- 97

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDG-KMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
                      PD   ++ +IN  CKD   +D  +   E++++R + PD VTYN+L+ GF
Sbjct: 98  ----------APDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKR-IFPDVVTYNTLIYGF 146

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C+VG++  A  LF  M  K    +V S+NILI+  CK+  V+    +   M+ + ++P V
Sbjct: 147 CIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDV 206

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +T ++L+ G F V     A  + + M  N V  D  ++   I+GL K   V EAV +F+ 
Sbjct: 207 VTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKE 266

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           ++         TY+ LI+GL K+GR+     L   ++  G   +V+T S++++ LCK G 
Sbjct: 267 MQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGH 326

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            D A  +   ++ K   P+ VT+  L+ G  +N +      + H +
Sbjct: 327 FDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDL 372



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 184/388 (47%), Gaps = 50/388 (12%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+ R I  ++I  + LI  F  +     A  +  +++  G QPD VT   ++   C + +
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + K     + +I +G   D V+Y +L++G C  G  ++A + F+             Y++
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGE-TKAPDQFM-------------YSM 106

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           +IN  CKD+ V DA  LY EM+ +RI P V+TYNTL+ G   VG L DA++L ++M+L +
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 430 VVPDSFTFATYIDGLCKNGFVL-----------------------------------EAV 454
           +VP+  +F   IDGLCK G V                                    +A 
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +F A+      + + +YN +INGL K   +  A  LF  +Q K   PD +T ST+I  L
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGL 286

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
            K G++    DL+ +M A     + +T+ +LL    ++      + +  K+  +K    +
Sbjct: 287 GKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKI-KDKGFEPN 345

Query: 575 LSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +   + +VD L K+ + ++    F  LL
Sbjct: 346 MVTYNILVDGLCKNGRLKDAQEIFHDLL 373


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 160/509 (31%), Positives = 271/509 (53%), Gaps = 8/509 (1%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F+D T + K  +   +SGN    E+++  + M++   +P +   T L+      +     
Sbjct: 87  FRD-TQMLKIFHRSCRSGNYI--ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA 143

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           V + + L   G  PD+F  N LIN  CKM     A  VL R+    F+P+TVT+N +I  
Sbjct: 144 VRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
           LC+ G++  A ++  +L    C P V+T+  LI           ALKL +EM++      
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG---L 259

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           KPD+ TYN+II G+CK+G VD+A E++  ++ +   P+VI+YN L+        W+E + 
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEK 319

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L  +M      P+VVT++ +I   C+DGK+++   LL+LM ++G+ PD  +Y+ L+  FC
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GR+  A E   +M+S GC  D+ +YN ++   CK+ K + A+ ++ ++      P+  
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YNT+ S L+  G+   AL +I +M  N + PD  T+ + I  LC+ G V EA ++   +
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           R+C+    + TYN ++ G CK  R++ A  +   +   G  P+  T + +I  +   G  
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +A +L  D+   + + SE +F  L R F
Sbjct: 560 AEAMELANDLVRIDAI-SEYSFKRLHRTF 587



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 223/441 (50%), Gaps = 4/441 (0%)

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           C+ G    +  +L  ++R  + P+ +    LI G      I +A R+ + L  F   P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
             +N LING C+      A ++ + M ++      PD VTYN +I  LC  G +D A ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSK---DFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L Q+   N  P VITY  LI          EA  L  EM+  G++PD+ T+N +I   CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G +D+   ++  +  +G  PD ++YN L+      G+     +L   M S+ C  +V +
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y+ILI   C+D K+E+A+ L + M  + + P   +Y+ L++   + G L  A++ ++ M 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            +  +PD   + T +  LCKNG   +A+++F  +    C     +YN + + L   G   
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A  +   +   G  PD +T ++MI  LC+EG +D+A +LL+DM +    PS VT+  +L
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 547 RGFVQNNKKSKVVVLLHKMAA 567
            GF + ++    + +L  M  
Sbjct: 516 LGFCKAHRIEDAINVLESMVG 536



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 192/385 (49%), Gaps = 4/385 (1%)

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR+ N + +L L E MV +      PDV+    +I G      + KA  ++ ++ ++   
Sbjct: 100 CRSGNYIESLHLLETMVRKG---YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQ 155

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+V  YN+LI GFC ++   +A  +   M      PD VT+N MI   C  GK+D   ++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L  ++     P  +TY  L++   L G +  A +L   M+S+G + D+++YN +I   CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           +  V+ A  + R +  +   P VI+YN LL  L   G   +  KL+ KM      P+  T
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++  I  LC++G + EA+ + + ++         +Y+ LI   C+ GRL  A +    + 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G +PD+V  +T++  LCK G+ D+A ++   +    C P+  ++ T+      +  K 
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKV 581
           + + ++ +M +  +   +++ +S +
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMI 480


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 161/471 (34%), Positives = 244/471 (51%), Gaps = 5/471 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +++F IL+  L K  Q    + + + + + GL PD      L+    +     GA  +
Sbjct: 197 PDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRI 256

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              ++ S     +V+ N L+NGLC EGRI EA R   +   F   P+ VTFN L+NGLCR
Sbjct: 257 KELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFC--PDQVTFNALVNGLCR 314

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           T +    L++ + M+ +   +   DV TYNS+I GLCK G +D+A E+L  M  R+  PN
Sbjct: 315 TGHIKQGLEMMDFMLEKGFEL---DVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPN 371

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +TYN+LI   C  +  + A  L   +   GV PDV TFN++I   C     +    L E
Sbjct: 372 TVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFE 431

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M ++G +PD  TY+ L++  C   R+  A  L   M   GC  +V  YN LI+  CK+ 
Sbjct: 432 EMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNN 491

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +V DA  ++ +M    +  S +TYNTL++GL +   + +A +L+D+M +  + PD FT+ 
Sbjct: 492 RVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYT 551

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T +   C+ G +  A  + Q +    CE  I TY  LI GLCK GR+  A KL   +Q K
Sbjct: 552 TMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMK 611

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           G +      + +I  LCK  +  +A  L  +M  K   P  +T+  + RG 
Sbjct: 612 GMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGL 662



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 253/487 (51%), Gaps = 5/487 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    + + L++L K  +   V +L  ++ ++ + PD+   N+LI  LCK      A ++
Sbjct: 162 PDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILM 221

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +      P+  TF  L+ G   E  +  A R+ + +    C+   V+ N L+NGLC+
Sbjct: 222 LEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCK 281

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 AL+     + E    C PD VT+N++++GLC+ G + +  E++  M ++    +
Sbjct: 282 EGRIEEALRF----IYEEEGFC-PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELD 336

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TYNSLI G C + +  EA  +   M+    +P+ VT+N +I   CK+  ++    L  
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELAR 396

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           ++  +GV PD  T+NSL+ G CL      A ELF  M  KGC  D ++Y+ILI + C ++
Sbjct: 397 VLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSER 456

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           ++++A+ L +EM       +V+ YNTL+ GL +   +GDA  + D+M++  V   S T+ 
Sbjct: 457 RLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYN 516

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T I+GLCK+  V EA Q+   +     +    TY  ++   C+ G +K A  +   +   
Sbjct: 517 TLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLN 576

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PD+VT  T+I  LCK G++D A+ LL  ++ K  V +   +  +++   +  +  + 
Sbjct: 577 GCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEA 636

Query: 559 VVLLHKM 565
           + L  +M
Sbjct: 637 MRLFREM 643



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 250/489 (51%), Gaps = 6/489 (1%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD    N+ ++ L K         +  +++     P+  TFN LI  LC   ++  A  +
Sbjct: 162 PDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILM 221

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            + +  +   P+  TF TL+ G     +   AL++ E MV E G  C+   V+ N +++G
Sbjct: 222 LEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMV-ESG--CELTSVSVNVLVNG 278

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK+G +++A   + +  +    P+ +T+N+L+ G C     K+   +   M++ G + D
Sbjct: 279 LCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELD 336

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           V T+N++I+  CK G++D+   +L  M+ R   P+TVTYN+L+   C    +  A EL  
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELAR 396

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            + SKG   DV ++N LI   C     E A+ L+ EM  +   P   TY+ L+  L    
Sbjct: 397 VLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSER 456

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L +AL L+ +M+L+    +   + T IDGLCKN  V +A  +F  +          TYN
Sbjct: 457 RLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYN 516

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LINGLCK  R++ A +L  ++  +G  PD  T +TM+ + C++G + +A D++ +M   
Sbjct: 517 TLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLN 576

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            C P  VT+ TL+ G  +  +      LL  +  + +V++  + +  V+  L K K+ +E
Sbjct: 577 GCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNP-VIQALCKRKRTKE 635

Query: 594 CLNQFRHLL 602
            +  FR ++
Sbjct: 636 AMRLFREMM 644



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 208/422 (49%), Gaps = 4/422 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +F  L+  L +       + +   +   G   D++  N LI+ LCK+G    A  +
Sbjct: 300 PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEI 359

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  ++     PNTVT+N LI  LC E  +  A  L + L      P+V TFN+LI GLC 
Sbjct: 360 LHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCL 419

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           T N  +A++LFEEM  E G  C PD  TY+ +I+ LC +  + +A  LL +M+      N
Sbjct: 420 TSNREIAMELFEEM-KEKG--CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARN 476

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+ YN+LI G C  +   +A+ +F +M   GV    VT+N +IN  CK  ++++  +L++
Sbjct: 477 VVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMD 536

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MI  G+ PD  TY +++  FC  G I RA ++  +M   GC  D+ +Y  LI   CK  
Sbjct: 537 QMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAG 596

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +V+ A  L R +  + +  +   YN ++  L +     +A++L  +M      PD  T+ 
Sbjct: 597 RVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYK 656

Query: 439 TYIDGLCKNGF-VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
               GLC  G  + EAV     +          ++  L  GLC +    T  +L + +  
Sbjct: 657 IVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVME 716

Query: 498 KG 499
           KG
Sbjct: 717 KG 718



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 174/355 (49%), Gaps = 6/355 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  +EAV     M+     P   ++  L+  L K    +    L + L S G+ PD
Sbjct: 349 KLGEI--DEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPD 406

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N LI  LC       A  +   +      P+  T++ LI  LC+E R+ EA  L K
Sbjct: 407 VCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLK 466

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++ +  C  NVV +NTLI+GLC+      A  +F++M  E   + +   VTYN++I+GLC
Sbjct: 467 EMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQM--EMLGVSRSS-VTYNTLINGLC 523

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   V++A +L+ QM    + P+  TY +++  FC   D K A  +   M  NG +PD+V
Sbjct: 524 KSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIV 583

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I   CK G++D  ++LL  +  +G+      YN ++   C   R   A  LF  M
Sbjct: 584 TYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREM 643

Query: 356 VSKGCRHDVYSYNILINANCK-DQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           + KG   DV +Y I+    C     +++AV    EML + I P   ++  L  GL
Sbjct: 644 MEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGL 698



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 161/319 (50%), Gaps = 2/319 (0%)

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           LL  +D  + P+   YN  +      +  K  + L  +M+ + V PDV TFN +I   CK
Sbjct: 152 LLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCK 211

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
             ++     +LE M   G+ PD  T+ +LM GF     +  A  +   MV  GC     S
Sbjct: 212 AHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVS 271

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
            N+L+N  CK+ ++E+A+    E   E   P  +T+N L++GL + G++   L+++D M 
Sbjct: 272 VNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFML 329

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                 D +T+ + I GLCK G + EAV++   + +  CE    TYN LI  LCK   ++
Sbjct: 330 EKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVE 389

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +L   L  KG +PDV T +++I  LC     + A +L  +M+ K C P E T+  L+
Sbjct: 390 AATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILI 449

Query: 547 RGFVQNNKKSKVVVLLHKM 565
                  +  + ++LL +M
Sbjct: 450 ESLCSERRLKEALMLLKEM 468



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 213/450 (47%), Gaps = 8/450 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           ++ +   F+ L+  L   G       L ++++      +  TF   +     + +    +
Sbjct: 88  YSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEI 147

Query: 207 -KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
             LF  M  +F    KPD   YN  +  L K   +   + L  +M    + P+V T+N L
Sbjct: 148 NPLFLLMERDFAV--KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNIL 205

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I   C     + A  +  +M + G++PD  TF  ++    ++  ++   R+ ELM++ G 
Sbjct: 206 IRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGC 265

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
              +V+ N L++G C  GRI  A         +G   D  ++N L+N  C+   ++  + 
Sbjct: 266 ELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLE 323

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           +   ML +     V TYN+L+SGL ++G + +A++++  M   D  P++ T+ T I  LC
Sbjct: 324 MMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLC 383

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K   V  A ++ + + +      + T+N LI GLC     + A +LF  ++ KG  PD  
Sbjct: 384 KENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEF 443

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T S +I  LC E ++ +A  LL +ME   C  + V + TL+ G  +NN+      +  +M
Sbjct: 444 TYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQM 503

Query: 566 AAEKLVVSDLSLS-SKVVDLLSKDKKYREC 594
             E L VS  S++ + +++ L K K+  E 
Sbjct: 504 --EMLGVSRSSVTYNTLINGLCKSKRVEEA 531



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 160/343 (46%), Gaps = 41/343 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F  L+  L      +  + LF+ +   G  PD F  ++LI  LC       A ++
Sbjct: 405 PDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALML 464

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +  S    N V +N LI+GLC   R+ +A  +F ++ +     + VT+NTLINGLC+
Sbjct: 465 LKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCK 524

Query: 199 TRNTLVALKLFEEMVNEF------------------GAI--------------CKPDVVT 226
           ++    A +L ++M+ E                   G I              C+PD+VT
Sbjct: 525 SKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVT 584

Query: 227 YNSIIDGLCKDGFVDKAKELL--LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           Y ++I GLCK G VD A +LL  +QMK   + P    YN +I   C     KEA  LF E
Sbjct: 585 YGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQA--YNPVIQALCKRKRTKEAMRLFRE 642

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGK--MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
           MM+ G  PDV+T+  +    C  G    + V+  +E M+++G+ P+  ++  L +G C +
Sbjct: 643 MMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVE-MLEKGILPEFPSFGFLAEGLCSL 701

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
                  +L   ++ KG      S   +I    K QK  DA+ 
Sbjct: 702 SMEDTLIQLINMVMEKG--RFSQSETSIIRGFLKIQKFNDALA 742



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 6/212 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A   FD M  +  S    ++  L+  L K+K+ +    L  ++   GL PD F    +
Sbjct: 494 GDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTM 553

Query: 123 INCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +   C+ G I   A +V    L  C  P+ VT+  LI GLC  GR+  A++L + + +  
Sbjct: 554 LKYFCQQGDIKRAADIVQNMTLNGC-EPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKG 612

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF-V 240
                  +N +I  LC+ + T  A++LF EM+ +      PDV+TY  +  GLC  G  +
Sbjct: 613 MVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDP---PDVITYKIVFRGLCNGGGPI 669

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
            +A +  ++M ++ I P   ++  L  G C +
Sbjct: 670 QEAVDFTVEMLEKGILPEFPSFGFLAEGLCSL 701


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/508 (31%), Positives = 263/508 (51%), Gaps = 6/508 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI +   P   ++  ++    K +    V  L   +  + L P  +   ++IN LC+ G 
Sbjct: 402 MIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGS 461

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  V   ++     PN V +  LI G   EGR  EA R+ K ++     P+V+ +N+
Sbjct: 462 IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNS 521

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I GLC++R    A     EM+ E G   KP+V TY ++I G CK G +  A     +M 
Sbjct: 522 VIIGLCKSRKMEEAKDYLVEMI-ERG--LKPNVYTYGALIHGYCKSGEMQVADRYFKEML 578

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              I PN +   +LI G+C      EA  +F  M+   V PDV T++A+I+   ++GK+ 
Sbjct: 579 GCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQ 638

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               LL   +++G+ PD  TYNS++ GFC  G I +A +L   M  KG   ++ +YN LI
Sbjct: 639 GAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALI 698

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N  CK  ++E A  L+  +  + +  + +TY T++ G  + GNL  A +L D+M L  V 
Sbjct: 699 NGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVP 758

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           PDSF ++  IDG  K G   +A+ +F ++++  K      + N L++G CK G++  A +
Sbjct: 759 PDSFVYSALIDGCRKEGNTEKALSLFLESVQ--KGFASTSSLNALMDGFCKSGKVIEANQ 816

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L   +  K   PD VT + +I + CK G + +A    +DM+ +N +P+ +T+  LL G+ 
Sbjct: 817 LLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYN 876

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
              ++S++  L  +M A+ +    ++ S
Sbjct: 877 MAGRRSEMFALFDEMIAKDIEPDGVTWS 904



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 156/562 (27%), Positives = 271/562 (48%), Gaps = 40/562 (7%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           L ++   D  +    +N   ++GN    + + F   M +   SP + ++ +++  L +  
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFE--MEEKGCSPSLVTYNVVIGGLCRAG 285

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           + D    L K ++  GL  D+F  ++LI+   K    + A ++L  +      P  V + 
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+G   +G   EA R+ +++       N+ T+N L+ G+C+  +   A  L  EM+  
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM- 404

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                KPD  TYN++I+G  K+    + K+LL +MK  N+ P   T   +I G C     
Sbjct: 405 --VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSI 462

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           ++A  +F  M+  GV+P+ V +  +I  + ++G+  +  R+L++M ++GV PD + YNS+
Sbjct: 463 EDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE-------------- 381
           + G C   ++  A++  V M+ +G + +VY+Y  LI+  CK  +++              
Sbjct: 523 IIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGI 582

Query: 382 ---DAVC------------------LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
              D VC                  ++R ML   + P V TY+ L+ GL + G L  A++
Sbjct: 583 APNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAME 642

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L+ +     +VPD FT+ + I G CK G + +A Q+ + +        I TYN LINGLC
Sbjct: 643 LLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLC 702

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G ++ A +LF  +  KG   + VT +T+I   CK G + KA  L  +M  K   P   
Sbjct: 703 KAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSF 762

Query: 541 TFCTLLRGFVQNNKKSKVVVLL 562
            +  L+ G  +     K + L 
Sbjct: 763 VYSALIDGCRKEGNTEKALSLF 784



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 159/516 (30%), Positives = 255/516 (49%), Gaps = 7/516 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   F+ M+ +   P    +T L+    +  ++   V + K ++  G+ PD+   N +I
Sbjct: 464 DASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVI 523

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LCK      A   L  ++     PN  T+  LI+G C  G +  A R FK++      
Sbjct: 524 IGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIA 583

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN V    LI+G C+  +T  A  +F  M+   G    PDV TY+++I GL ++G +  A
Sbjct: 584 PNDVVCTALIDGYCKEGSTTEATSIFRCML---GRSVHPDVRTYSALIHGLLRNGKLQGA 640

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ELL +  ++ + P+V TYNS+I GFC      +A  L   M   G+ P+++T+NA+IN 
Sbjct: 641 MELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING 700

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G++++   L + +  +G+  + VTY +++DG+C  G +S+A  LF  M  KG   D
Sbjct: 701 LCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPD 760

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            + Y+ LI+   K+   E A+ L+ E + +    S  + N L+ G  + G + +A +L++
Sbjct: 761 SFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLE 819

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M    V PD  T+   ID  CK GF+ EA Q F  ++         TY  L++G    G
Sbjct: 820 DMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAG 879

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R      LF  +  K   PD VT S MI    KEG   K   L+ DM  K    S+    
Sbjct: 880 RRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCH 939

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            L+    +    S+V+ +L K+  + L   +LSL++
Sbjct: 940 VLIDPLCRKEHVSEVLKVLEKIEEQGL---NLSLAT 972



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 246/540 (45%), Gaps = 37/540 (6%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
             EAV     M K    P +  +  ++  L K+++ +        +   GL P+++    L
Sbjct: 498  QEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGAL 557

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I+  CK G    A      +L     PN V    LI+G C EG   EA  +F+ +   + 
Sbjct: 558  IHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSV 617

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             P+V T++ LI+GL R      A++L  E + E G +  PDV TYNSII G CK G + K
Sbjct: 618  HPDVRTYSALIHGLLRNGKLQGAMELLSEFL-EKGLV--PDVFTYNSIISGFCKQGGIGK 674

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            A +L   M  + I+PN+ITYN+LI G C   + + A+ LF  +   G+  + VT+  +I+
Sbjct: 675  AFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIID 734

Query: 303  YNCKDGKMDKVNRLLELMIQRGVNPDTVTY------------------------------ 332
              CK G + K  RL + M  +GV PD+  Y                              
Sbjct: 735  GYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS 794

Query: 333  ----NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
                N+LMDGFC  G++  A +L   MV K  + D  +Y ILI+ +CK   +++A   + 
Sbjct: 795  TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFV 854

Query: 389  EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            +M    + P+ +TY  LLSG    G   +   L D+M   D+ PD  T++  ID   K G
Sbjct: 855  DMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEG 914

Query: 449  FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
              ++ +++   +      +     + LI+ LC+   +    K+  +++ +G    + TCS
Sbjct: 915  DHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCS 974

Query: 509  TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            T++    K G+MD A  +L  M     VP       L+     +         L +MA E
Sbjct: 975  TLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQMAWE 1034



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 223/489 (45%), Gaps = 38/489 (7%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V  LLI+   K G+   A        R+ F    +  N L++ L    ++    R +  +
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                  +V T+  LIN   R  N     +L  EM  E G  C P +VTYN +I GLC+ 
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEM-EEKG--CSPSLVTYNVVIGGLCRA 284

Query: 238 GFVDKAKEL-----------------------------------LLQMKDRNINPNVITY 262
           G VD+A EL                                   L +M  + + P  + Y
Sbjct: 285 GEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAY 344

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            +LI GF    D  EA  +  EM+  GV+ ++ T+NA++   CK G M+K + LL  MI 
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM 404

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G+ PDT TYN++++G+      SR ++L   M         Y+  ++IN  C+   +ED
Sbjct: 405 VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIED 464

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  ++  M+S  ++P+ + Y TL+ G  Q G   +A++++  M    V PD   + + I 
Sbjct: 465 ASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVII 524

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK+  + EA      +     +  + TY  LI+G CK G ++ A + F  +   G  P
Sbjct: 525 GLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAP 584

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           + V C+ +I   CKEG   +A  +   M  ++  P   T+  L+ G ++N K    + LL
Sbjct: 585 NDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELL 644

Query: 563 HKMAAEKLV 571
            +   + LV
Sbjct: 645 SEFLEKGLV 653



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 214/470 (45%), Gaps = 39/470 (8%)

Query: 61   TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
            ++ EA   F CM+     P + +++ L+  L +N +    + L       GL PD+F  N
Sbjct: 601  STTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYN 660

Query: 121  LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
             +I+  CK G    AF +   + +   +PN +T+N LINGLC  G I  A  LF  +   
Sbjct: 661  SIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGK 720

Query: 181  ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
                N VT+ T+I+G C++ N   A +LF+EM  +      PD   Y+++IDG  K+G  
Sbjct: 721  GLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG---VPPDSFVYSALIDGCRKEGNT 777

Query: 241  DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +KA  L L+   +    +  + N+L+ GFC      EA  L  +M+D  V+PD VT+  +
Sbjct: 778  EKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTIL 836

Query: 301  INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
            I+Y+CK G + +  +    M +R + P+ +TY +L+ G+ + GR S    LF  M++K  
Sbjct: 837  IDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDI 896

Query: 361  RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
              D  +++++I+A+ K+                                   G+    LK
Sbjct: 897  EPDGVTWSVMIDAHLKE-----------------------------------GDHVKTLK 921

Query: 421  LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
            L+D M               ID LC+   V E ++V + I      L + T + L+    
Sbjct: 922  LVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFH 981

Query: 481  KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            K G++  A ++   +     +PD    + +I+        + A D L  M
Sbjct: 982  KAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 261/553 (47%), Gaps = 43/553 (7%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           +F     +M  S  + SF+IL  +L  ++       LF R +S        V+N +I   
Sbjct: 87  FFNWVQFQMGFSQKLQSFSILALILCNSR-------LFSRADS--------VVNQMI--- 128

Query: 127 CKMGITSGAFVVLGRILRSC---------------FTPNTVTFNFLINGLCAEGRIMEAA 171
             M  + G   +L  +++SC                    V F  LI+G   +G   EA 
Sbjct: 129 --MMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAV 186

Query: 172 RLF--KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
             F   K N F     ++  N L++ L +     +  + +  M+    A    DV TY  
Sbjct: 187 SFFLGAKRNGFVV--GLLCCNGLLSDLLKANKLELFWRFYNGMLE---ANVLHDVYTYTH 241

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+   + G   + K LL +M+++  +P+++TYN +I G C   +  EA  L   M   G
Sbjct: 242 LINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKG 301

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           +  DV T++ +I+   K  +  +   +LE M  +G+ P  V Y +L+DGF   G    A 
Sbjct: 302 LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAF 361

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            +   M+++G + ++++YN L+   CK   +E A  L  EM+   I+P   TYN ++ G 
Sbjct: 362 RVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGY 421

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            +  N      L+ +M+ +++VP ++T    I+GLC++G + +A +VF+ + +   +   
Sbjct: 422 LKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNA 481

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
             Y  LI G  + GR + A ++   +  KG  PDV+  +++I  LCK  +M++A D L++
Sbjct: 482 VIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVE 541

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           M  +   P+  T+  L+ G+ ++ +         +M    +  +D+ + + ++D   K+ 
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV-VCTALIDGYCKEG 600

Query: 590 KYRECLNQFRHLL 602
              E  + FR +L
Sbjct: 601 STTEATSIFRCML 613



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 148/338 (43%), Gaps = 6/338 (1%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            K+G I    A   FD +     +    ++  ++    K+        LF  +   G+ PD
Sbjct: 703  KAGEI--ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPD 760

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             FV + LI+   K G T  A  +    ++  F  +T + N L++G C  G+++EA +L +
Sbjct: 761  SFVYSALIDGCRKEGNTEKALSLFLESVQKGFA-STSSLNALMDGFCKSGKVIEANQLLE 819

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
             +      P+ VT+  LI+  C+T     A + F +M         P+ +TY +++ G  
Sbjct: 820  DMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRN---LMPNALTYTALLSGYN 876

Query: 236  KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
              G   +   L  +M  ++I P+ +T++ +I       D  +   L  +M+  G      
Sbjct: 877  MAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKN 936

Query: 296  TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
              + +I+  C+   + +V ++LE + ++G+N    T ++L+  F   G++  A  +  SM
Sbjct: 937  VCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSM 996

Query: 356  VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            V      D    N LIN        E+A    ++M  E
Sbjct: 997  VRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQMAWE 1034


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 154/471 (32%), Positives = 248/471 (52%), Gaps = 3/471 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F  L+  L +  Q  T V + + ++S G+ PD      L+    + G    A  V
Sbjct: 87  PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             R+L    +   VT N LING C  GR+ +A    ++      +P+ +T+NT +NGLC+
Sbjct: 147 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 206

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   ALK+ + MV E      PDV TYN +++ LCK+G +++AK +L QM DR   P+
Sbjct: 207 NDHVGHALKVMDVMVQEGH---DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 263

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           + T+N+LI   C  +  +EA  L  ++   GV PDV TFN +IN  CK G      RL E
Sbjct: 264 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 323

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M   G  PD VTYN+L+D  C +G++ +A +L   M S GC     +YN +I+  CK  
Sbjct: 324 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM 383

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           ++E+A  ++ +M  + I  + IT+NTL+ GL +   + DA +LI++M    + P++ T+ 
Sbjct: 384 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 443

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +   CK G + +A  + + +     E+ + TY  LINGLCK GR + A K+   ++ K
Sbjct: 444 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 503

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           G  P     + ++  L +   +  A  L  +M      P  +T+  + RG 
Sbjct: 504 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 554



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 251/487 (51%), Gaps = 4/487 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV   + M     +P  T+FT L+    +    +  + +  R+   G       +N+LIN
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK+G    A   + + +   F P+ +T+N  +NGLC    +  A ++   +     DP
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T+N ++N LC+      A  +  +MV+     C PD+ T+N++I  LC    +++A 
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG---CLPDITTFNTLIAALCTGNRLEEAL 284

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  Q+  + ++P+V T+N LI   C V D   A  LF EM ++G  PD VT+N +I+  
Sbjct: 285 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 344

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  GK+ K   LL+ M   G    T+TYN+++DG C   RI  A E+F  M  +G   + 
Sbjct: 345 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 404

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            ++N LI+  CKD+K++DA  L  +M+SE ++P+ ITYN++L+   + G++  A  +++ 
Sbjct: 405 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 464

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  N    D  T+ T I+GLCK G    A++V + +R        + YN ++  L +   
Sbjct: 465 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 524

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK-EGQMDKANDLLLDMEAKNCVPSEVTFC 543
           ++ A  LF  +   G  PD +T   +   LC+  G + +A D +L+M  K  +P   +F 
Sbjct: 525 IRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFR 584

Query: 544 TLLRGFV 550
            L  G +
Sbjct: 585 MLAEGLL 591



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 246/452 (54%), Gaps = 4/452 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +TV +N L+N L    ++     ++ ++      P+VVTFNTL+  LCR      A+ + 
Sbjct: 53  DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 112

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           EEM +   A   PD  T+ +++ G  ++G ++ A  +  +M +   +   +T N LI G+
Sbjct: 113 EEMSSRGVA---PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 169

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C +   ++A     + + +G +PD +T+N  +N  C++  +    +++++M+Q G +PD 
Sbjct: 170 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 229

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN +++  C  G++  A+ +   MV +GC  D+ ++N LI A C   ++E+A+ L R+
Sbjct: 230 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 289

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           +  + + P V T+N L++ L +VG+   AL+L ++M+ +   PD  T+ T ID LC  G 
Sbjct: 290 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 349

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A+ + + + +  C     TYN +I+GLCK  R++ A ++F ++  +G   + +T +T
Sbjct: 350 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 409

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I  LCK+ ++D A +L+  M ++   P+ +T+ ++L  + +     K   +L  M A  
Sbjct: 410 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 469

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             V D+     +++ L K  + +  L   R +
Sbjct: 470 FEV-DVVTYGTLINGLCKAGRTQVALKVLRGM 500



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 216/402 (53%), Gaps = 5/402 (1%)

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKD 237
           +F    + V +N L+N L         +KL E + +E GA   KPDVVT+N+++  LC+ 
Sbjct: 47  LFGIQADTVVYNHLLNVLVEGSK----MKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 102

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             V  A  +L +M  R + P+  T+ +L+ GF      + A  +   M++ G     VT 
Sbjct: 103 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 162

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +IN  CK G+++     ++  I  G  PD +TYN+ ++G C    +  A ++   MV 
Sbjct: 163 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 222

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +G   DV++YNI++N  CK+ ++E+A  +  +M+     P + T+NTL++ L     L +
Sbjct: 223 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 282

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           AL L  ++ +  V PD +TF   I+ LCK G    A+++F+ ++N  C     TYN LI+
Sbjct: 283 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 342

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
            LC +G+L  A  L   ++  G     +T +T+I  LCK+ ++++A ++   M+ +    
Sbjct: 343 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 402

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           + +TF TL+ G  ++ K      L+++M +E L  ++++ +S
Sbjct: 403 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 444



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 197/396 (49%), Gaps = 6/396 (1%)

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL-QMKDR-NINPNVITYNSL 265
           L  EM  E G   K  VV  +S +D        D A +L+L Q++    I  + + YN L
Sbjct: 4   LVAEMRRE-GHQVKLGVV--HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHL 60

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           +         K  + ++ EM   G++PDVVTFN ++   C+  ++     +LE M  RGV
Sbjct: 61  LNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGV 120

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD  T+ +LM GF   G I  A  +   M+  GC     + N+LIN  CK  +VEDA+ 
Sbjct: 121 APDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG 180

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
             ++ +++   P  ITYNT ++GL Q  ++G ALK++D M      PD FT+   ++ LC
Sbjct: 181 YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 240

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           KNG + EA  +   + +  C   I T+N LI  LC   RL+ A  L  ++  KG  PDV 
Sbjct: 241 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 300

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T + +I+ LCK G    A  L  +M+   C P EVT+ TL+       K  K + LL  M
Sbjct: 301 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            +     S ++ ++ ++D L K  +  E    F  +
Sbjct: 361 ESTGCPRSTITYNT-IIDGLCKKMRIEEAEEVFDQM 395



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 181/352 (51%), Gaps = 4/352 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA    + M+     P +T+F  L+  L    + +  + L +++   G+ PD++  N+L
Sbjct: 246 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 305

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LCK+G    A  +   +  S  TP+ VT+N LI+ LC+ G++ +A  L K +    C
Sbjct: 306 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 365

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + +T+NT+I+GLC+      A ++F++M  +   I + + +T+N++IDGLCKD  +D 
Sbjct: 366 PRSTITYNTIIDGLCKKMRIEEAEEVFDQM--DLQGISR-NAITFNTLIDGLCKDKKIDD 422

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL+ QM    + PN ITYNS++  +C   D K+A  +   M  NG + DVVT+  +IN
Sbjct: 423 AFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLIN 482

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+     ++L  M  +G+ P    YN ++        I  A  LF  M   G   
Sbjct: 483 GLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 542

Query: 363 DVYSYNILINANCK-DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
           D  +Y I+    C+    +++A     EM+ +   P   ++  L  GL  +G
Sbjct: 543 DALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 594



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 68/314 (21%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + +F IL+  L K       + LF+ + ++G  PD    N LI+ LC +G    A  
Sbjct: 296 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 355

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +  +    +T+T+N +I+GLC + RI EA  +F ++++     N +TFNTLI+GLC
Sbjct: 356 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 415

Query: 198 RTRNTLVALKLFEEMVNE--------FGAI----CKP--------------------DVV 225
           + +    A +L  +M++E        + +I    CK                     DVV
Sbjct: 416 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 475

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF--- 282
           TY ++I+GLCK G    A ++L  M+ + + P    YN ++      ++ ++A  LF   
Sbjct: 476 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 535

Query: 283 ---------------------------------IEMMDNGVQPDVVTFNAMINYNCKDGK 309
                                            +EM+D G  P+  +F  +       G 
Sbjct: 536 AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 595

Query: 310 MDKVNRLLELMIQR 323
            D   R +E+++++
Sbjct: 596 DDYFIRAIEIIMEK 609


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 166/527 (31%), Positives = 264/527 (50%), Gaps = 77/527 (14%)

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           +N+++  LC+ G    A  ++  + R   +P+ V++N LINGLC   ++ EA  L  ++ 
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-FGAICKPDVVTYNSIIDGLCKD 237
              C PN VT  TL++GLC+      A++L E M  + F A    DVV Y ++I G C +
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDA----DVVLYGTLISGFCNN 116

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G +D+ KEL  +M  + I+ NV+TY+ L+ G C +  WKEA  +   M ++G+ PDVVT+
Sbjct: 117 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 176

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
             +I+  CKDG+      LL LM+++G  P  VTYN L+ G C  G +  A ++   M+ 
Sbjct: 177 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 236

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER--IRPSVITYNTLLSGLFQVGNL 415
           KG + DV +YN L+   C   KV++A+ L+  M      + P+V T+N L+ GL + G L
Sbjct: 237 KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 296

Query: 416 GDALKLIDKM---------------------------------QLNDV--VPDSFTFATY 440
             A+K+  KM                                 Q+ D+  VP+SFT++  
Sbjct: 297 TKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSIL 356

Query: 441 IDG-----------------------------------LCKNGFVLEAVQVFQAIRNCKC 465
           IDG                                   LCK G + +A  +FQ + N  C
Sbjct: 357 IDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 416

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           E  I ++N +I+G  K G  +   +L  ++   G  PD +T ST+I+ L K G++D+A  
Sbjct: 417 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 476

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            L  M A    P  + + +LL+G       ++++ LLH+MAA+  V+
Sbjct: 477 ALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL 523



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 229/459 (49%), Gaps = 5/459 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+   + M K      +  +  L++    N   D    LF  +   G+  ++   + L
Sbjct: 85  DEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCL 144

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LC++G    A  VL  +      P+ VT+  LI+GLC +GR   A  L   +     
Sbjct: 145 VHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGE 204

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+ VT+N L++GLC+    + A K+   M+ E G   K DVVTYN+++ GLC  G VD+
Sbjct: 205 EPSNVTYNVLLSGLCKEGLVIDAFKILRMMI-EKGK--KADVVTYNTLMKGLCDKGKVDE 261

Query: 243 AKELLLQMKDRN--INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           A +L   M D    + PNV T+N LI G C      +A  +  +M+  G   ++VT+N +
Sbjct: 262 ALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNML 321

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +    K GK+ +   L + ++  G  P++ TY+ L+DGFC +  ++ A+ LF  M + G 
Sbjct: 322 LGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGL 381

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
              ++ YN L+ + CK+  +E A  L++EM +    P +I++NT++ G  + G+     +
Sbjct: 382 NPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKE 441

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  KM    + PD+ TF+T I+ L K G + EA    + +           Y+ L+ GL 
Sbjct: 442 LQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLS 501

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
             G       L H++  KG + D    ST++  LC   Q
Sbjct: 502 SKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQ 540



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 217/417 (52%), Gaps = 7/417 (1%)

Query: 44  GTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL 103
           GT I+ F N+    GN+   + +  FD M+    S  + +++ L+  L +  Q+    ++
Sbjct: 107 GTLISGFCNN----GNLDRGKEL--FDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTV 160

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
              +  +G+ PD+     LI+ LCK G  + A  +L  ++     P+ VT+N L++GLC 
Sbjct: 161 LNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 220

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           EG +++A ++ + +       +VVT+NTL+ GLC       ALKLF  M +    + +P+
Sbjct: 221 EGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCL-EPN 279

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V T+N +I GLCK+G + KA ++  +M  +    N++TYN L+ G       KEA  L+ 
Sbjct: 280 VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWK 339

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +++D G  P+  T++ +I+  CK   ++    L   M   G+NP    YN+LM   C  G
Sbjct: 340 QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 399

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            + +A+ LF  M +  C  D+ S+N +I+   K    +    L  +M+   +RP  +T++
Sbjct: 400 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 459

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TL++ L ++G L +A   +++M  +   PD+  + + + GL   G   E + +   +
Sbjct: 460 TLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 516



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 174/350 (49%), Gaps = 5/350 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL--NSNGLFPDLFVLNL 121
           +A      MI+      + ++  L+  L    + D  + LF  +  N N L P++F  N+
Sbjct: 226 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 285

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI  LCK G  + A  +  ++++     N VT+N L+ G    G+I EA  L+K++    
Sbjct: 286 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 345

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN  T++ LI+G C+ R   +A  LF EM         P +  YN+++  LCK+G ++
Sbjct: 346 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG---LNPALFDYNTLMASLCKEGSLE 402

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +AK L  +M + N  P++I++N++I G     D++  K L ++M++ G++PD +TF+ +I
Sbjct: 403 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 462

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N   K G++D+    LE M+  G  PD + Y+SL+ G    G  +    L   M +KG  
Sbjct: 463 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 522

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
            D    + ++   C   +  D + L           + I+ N LL  L Q
Sbjct: 523 LDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQLHQ 572



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 134/269 (49%), Gaps = 1/269 (0%)

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N ++ G C  G +  A  L   M  K    D+ SYN LIN  CK +K+++AV L  EM +
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
               P+ +T  TL+ GL + G + +A++L++ M+      D   + T I G C NG +  
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
             ++F  +        + TY+CL++GLC++G+ K A  + + +   G  PDVVT + +I 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            LCK+G+   A DLL  M  K   PS VT+  LL G  +         +L +M  EK   
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL-RMMIEKGKK 240

Query: 573 SDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +D+   + ++  L    K  E L  F  +
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSM 269


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/531 (30%), Positives = 271/531 (51%), Gaps = 4/531 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  F   M+     P   ++  L+   +   Q+   V +FK +  + + PD+  L++L
Sbjct: 271 DKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 330

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LCK G    A  V   +      PN  ++  ++NG   +G +++   LF  +     
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++ TFN LI           A+ +F EM +      KPDVVTY ++I  LC+ G +D 
Sbjct: 391 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG---VKPDVVTYRTVIAALCRIGKMDD 447

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E   QM D+ + P+   Y+ LI GFC      +AK L  E+M+NG+  D+V F+++IN
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++     + +L +  G++P  V Y+ LMDG+CLVG++ +A  +F +MVS G   
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +   Y  L+N  CK  ++++ + L+REML + I+PS I YN ++ GLF+ G    A    
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 627

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M  + +  +  T+   + GL KN    EA+ +F+ +R    ++ I T N +I G+ + 
Sbjct: 628 HEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQT 687

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            R++ A  LF  +   G +P VVT S MI  L KEG +++A D+   M+   C P     
Sbjct: 688 RRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 747

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             ++R  ++ N+  +    L K+      +  L+ +  +VDL S     RE
Sbjct: 748 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT-TMLLVDLFSSKGTCRE 797



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 259/491 (52%), Gaps = 6/491 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           SP   ++ IL+    +  + +  ++ F +L   GL  ++ + N L+   C+   T  A  
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALD 167

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           ++L R       P+  +++ L+  LC +G+  +A  L + +      C P+VV ++T+I+
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVID 227

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A  LF+EMV        PD VTY+S++  LCK   +DKA+  L QM ++ 
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRG---IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TYN+LI G+     WKEA  +F EM  + + PDVVT + ++   CK GK+ +  
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + M  +G NP+  +Y  +++G+   G +    +LF  M+  G   D+Y++N+LI A 
Sbjct: 345 DVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 404

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
                ++ A+ ++ EM    ++P V+TY T+++ L ++G + DA++  ++M    V PD 
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           + +   I G C +G +L+A ++   I N    L I  ++ +IN LCK+GR+  A  +F  
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 524

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             + G  P  V  S ++   C  G+M+KA  +   M +    P++V + TL+ G+ +  +
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGR 584

Query: 555 KSKVVVLLHKM 565
             + + L  +M
Sbjct: 585 IDEGLSLFREM 595



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 211/445 (47%), Gaps = 13/445 (2%)

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVV-----TFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           C  G  +  A LF +    A  P V+     T+  L++   R     +AL  F +++   
Sbjct: 83  CRSGPALAVA-LFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTG 141

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLL-QMKDRNINPNVITYNSLICGFCCVDDW 275
               + +++  N ++ G C+    D+A ++LL +  +    P+V +Y+ L+   C     
Sbjct: 142 ---LRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKS 198

Query: 276 KEAKCLFIEMMDNGV--QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
            +A  L   M + G    PDVV ++ +I+   K+G ++K   L + M+QRG+ PD VTY+
Sbjct: 199 GQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYS 258

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           S++   C    + +A      MV+KG   + ++YN LI       + ++AV +++EM   
Sbjct: 259 SVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH 318

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            I P V+T + L+  L + G + +A  + D M +    P+ F++   ++G    G +++ 
Sbjct: 319 SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDM 378

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             +F  +        I T+N LI      G L  A  +F+ ++  G  PDVVT  T+I  
Sbjct: 379 TDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAA 438

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           LC+ G+MD A +    M  +   P +  +  L++GF  +    K   L+ ++    + + 
Sbjct: 439 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHL- 497

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQF 598
           D+   S +++ L K  +  +  N F
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIF 522



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 181/397 (45%), Gaps = 3/397 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F+ M      P + ++  ++  L +  + D  +  F ++   G+ PD +  + L
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C  G    A  ++  I+ +    + V F+ +IN LC  GR+M+A  +F        
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P  V ++ L++G C       AL++F+ MV+   A  +P+ V Y ++++G CK G +D+
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS---AGIEPNDVVYGTLVNGYCKIGRIDE 587

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              L  +M  + I P+ I YN +I G         AK  F EM ++G+  +  T+N ++ 
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLR 647

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+   D+   L + +    V  + +T N+++ G     R+  A++LF S+   G   
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 707

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V +Y+I+I    K+  VE+A  ++  M +    P     N ++  L +   +  A   +
Sbjct: 708 CVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYL 767

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            K+   +   +  T    +D     G   E ++   A
Sbjct: 768 SKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPA 804


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 276/531 (51%), Gaps = 11/531 (2%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           T I + L DR + G     EA+   D M+     P + ++T+LL  + K+  +   + + 
Sbjct: 149 TPIIRGLCDRGRVG-----EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 203

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
             + + G  P++   N++IN +C+ G    A   L R+    F P+TV++  ++ GLCA 
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
            R  +   LF ++    C PN VTF+ L+   CR      A+++ E+M    G  C  + 
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS---GHGCAANT 320

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
              N +I+ +CK G VD A + L  M     +P+ I+Y +++ G C  + W++AK L  E
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+     P+ VTFN  I   C+ G +++   L+E M + G   + VTYN+L++GFC+ GR
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A ELF SM    C+ +  +Y  L+   C  ++++ A  L  EML +   P+V+T+N 
Sbjct: 441 VDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+S   Q G + +A++L+++M  +   P+  T+ T +DG+  +    EA+++   + +  
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I TY+ +I  L +  R++ A K+FH +Q  G  P  V  + ++  LCK    D A 
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           D    M +  C+P+E+T+ TL+ G    +   +   LL ++ +  ++  +L
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNL 668



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 252/500 (50%), Gaps = 10/500 (2%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L  R  S G  PD+++   LI  LC+ G TS A  VL    RS    +   +N L+ G C
Sbjct: 65  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 124

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G++  A RL   + V    P+  T+  +I GLC       AL L ++M++     C+P
Sbjct: 125 RYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG---CQP 178

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            VVTY  +++ +CK     +A E+L +M+ +   PN++TYN +I G C      +A+   
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             +   G QPD V++  ++   C   + + V  L   M+++   P+ VT++ L+  FC  
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G + RA ++   M   GC  +    NI+IN  CK  +V+DA      M S    P  I+Y
Sbjct: 299 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 358

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            T+L GL +     DA +L+ +M   +  P+  TF T+I  LC+ G + +A  + + +  
Sbjct: 359 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
             CE+ I TYN L+NG C  GR+ +A +LF+ +  K   P+ +T +T++  LC   ++D 
Sbjct: 419 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDA 475

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A +LL +M  K+C P+ VTF  L+  F Q     + + L+ +M  E     +L   + ++
Sbjct: 476 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM-MEHGCTPNLITYNTLL 534

Query: 583 DLLSKDKKYRECLNQFRHLL 602
           D ++ D    E L     L+
Sbjct: 535 DGITNDCNSEEALELLHGLV 554



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 145/328 (44%), Gaps = 38/328 (11%)

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           DD  EA  L       G  PDV     +I   C+ G+     R+L    + G   D   Y
Sbjct: 57  DDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAY 116

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N+L+ G+C  G++  AR L  SM       D Y+Y  +I   C   +V +A+ L  +ML 
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
              +PSV+TY  LL  + +    G A++++D+M+     P+  T+   I+G+C+ G V +
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT------ 506
           A +    + +   +    +Y  ++ GLC   R +   +LF  +  K  +P+ VT      
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR 293

Query: 507 -----------------------------CSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
                                        C+ +I+ +CK+G++D A   L +M +  C P
Sbjct: 294 FFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 353

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             +++ T+L+G  +  +      LL +M
Sbjct: 354 DTISYTTVLKGLCRAERWEDAKELLKEM 381



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 5/167 (2%)

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N  L  L    +L +A +L+D+       PD +     I  LC+ G   +A +V +A   
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI-PDVVTCSTMIHWLCKEGQMD 521
               + +  YN L+ G C+ G+L  A     RL    P+ PD  T + +I  LC  G++ 
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAA----RRLIASMPVAPDAYTYTPIIRGLCDRGRVG 162

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +A  LL DM  + C PS VT+  LL    ++    + + +L +M A+
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK 209


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 154/471 (32%), Positives = 247/471 (52%), Gaps = 3/471 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F  L+  L +  Q  T V + + ++S G+ PD      L+    + G    A  V
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             R+L    +   VT N LING C  GR+ +A    ++      +P+ +T+NT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   ALK+ + MV E      PDV TYN +++ LCK+G +++AK +L QM DR   P+
Sbjct: 299 NDHVGHALKVMDVMVQEG---HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 355

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           + T+N+LI   C  +  +EA  L  ++   GV PDV TFN +IN  CK G      RL E
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M   G  PD VTYN+L+D  C +G++ +A +L   M S GC     +YN +I+  CK  
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM 475

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           ++E+A  ++ +M  + I  + IT+NTL+ GL +   + DA  LI++M    + P++ T+ 
Sbjct: 476 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYN 535

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +   CK G + +A  + + +     E+ + TY  LINGLCK GR + A K+   ++ K
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           G  P     + ++  L +   +  A  L  +M      P  +T+  + RG 
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 646



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 251/487 (51%), Gaps = 4/487 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV   + M     +P  T+FT L+    +    +  + +  R+   G       +N+LIN
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK+G    A   + + +   F P+ +T+N  +NGLC    +  A ++   +     DP
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T+N ++N LC+      A  +  +MV+     C PD+ T+N++I  LC    +++A 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG---CLPDITTFNTLIAALCTGNRLEEAL 376

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  Q+  + ++P+V T+N LI   C V D   A  LF EM ++G  PD VT+N +I+  
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  GK+ K   LL+ M   G    T+TYN+++DG C   RI  A E+F  M  +G   + 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            ++N LI+  CKD+K++DA  L  +M+SE ++P+ ITYN++L+   + G++  A  +++ 
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  N    D  T+ T I+GLCK G    A++V + +R        + YN ++  L +   
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 616

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK-EGQMDKANDLLLDMEAKNCVPSEVTFC 543
           ++ A  LF  +   G  PD +T   +   LC+  G + +A D +L+M  K  +P   +F 
Sbjct: 617 IRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFR 676

Query: 544 TLLRGFV 550
            L  G +
Sbjct: 677 MLAEGLL 683



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 245/452 (54%), Gaps = 4/452 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +TV +N L+N L    ++     ++ ++      P+VVTFNTL+  LCR      A+ + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           EEM +   A   PD  T+ +++ G  ++G ++ A  +  +M +   +   +T N LI G+
Sbjct: 205 EEMSSRGVA---PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C +   ++A     + + +G +PD +T+N  +N  C++  +    +++++M+Q G +PD 
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN +++  C  G++  A+ +   MV +GC  D+ ++N LI A C   ++E+A+ L R+
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           +  + + P V T+N L++ L +VG+   AL+L ++M+ +   PD  T+ T ID LC  G 
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A+ + + + +  C     TYN +I+GLCK  R++ A ++F ++  +G   + +T +T
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I  LCK+ ++D A  L+  M ++   P+ +T+ ++L  + +     K   +L  M A  
Sbjct: 502 LIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             V D+     +++ L K  + +  L   R +
Sbjct: 562 FEV-DVVTYGTLINGLCKAGRTQVALKVLRGM 592



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 216/402 (53%), Gaps = 5/402 (1%)

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKD 237
           +F    + V +N L+N L         +KL E + +E GA   KPDVVT+N+++  LC+ 
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSK----MKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             V  A  +L +M  R + P+  T+ +L+ GF      + A  +   M++ G     VT 
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +IN  CK G+++     ++  I  G  PD +TYN+ ++G C    +  A ++   MV 
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +G   DV++YNI++N  CK+ ++E+A  +  +M+     P + T+NTL++ L     L +
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           AL L  ++ +  V PD +TF   I+ LCK G    A+++F+ ++N  C     TYN LI+
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
            LC +G+L  A  L   ++  G     +T +T+I  LCK+ ++++A ++   M+ +    
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           + +TF TL+ G  ++ K      L+++M +E L  ++++ +S
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNS 536



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 203/414 (49%), Gaps = 20/414 (4%)

Query: 207 KLFEEMVNEFGAICKPDVV-----------------TYNSIIDGLCKDGFVDKAKELLL- 248
           +++EE++ + GA+   D++                   +S +D        D A +L+L 
Sbjct: 75  EVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILN 134

Query: 249 QMKDR-NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
           Q++    I  + + YN L+         K  + ++ EM   G++PDVVTFN ++   C+ 
Sbjct: 135 QLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            ++     +LE M  RGV PD  T+ +LM GF   G I  A  +   M+  GC     + 
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N+LIN  CK  +VEDA+   ++ +++   P  ITYNT ++GL Q  ++G ALK++D M  
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
               PD FT+   ++ LCKNG + EA  +   + +  C   I T+N LI  LC   RL+ 
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  L  ++  KG  PDV T + +I+ LCK G    A  L  +M+   C P EVT+ TL+ 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                 K  K + LL  M +     S ++ ++ ++D L K  +  E    F  +
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNT-IIDGLCKKMRIEEAEEVFDQM 487



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 184/359 (51%), Gaps = 6/359 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +   EA    + M+     P +T+F  L+  L    + +  + L +++   G+ PD
Sbjct: 333 KNGQL--EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N+LIN LCK+G    A  +   +  S  TP+ VT+N LI+ LC+ G++ +A  L K
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +    C  + +T+NT+I+GLC+      A ++F++M  +   I + + +T+N++IDGLC
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM--DLQGISR-NAITFNTLIDGLC 507

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           KD  +D A  L+ QM    + PN ITYNS++  +C   D K+A  +   M  NG + DVV
Sbjct: 508 KDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +IN  CK G+     ++L  M  +G+ P    YN ++        I  A  LF  M
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627

Query: 356 VSKGCRHDVYSYNILINANCK-DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
              G   D  +Y I+    C+    +++A     EM+ +   P   ++  L  GL  +G
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 137/314 (43%), Gaps = 68/314 (21%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + +F IL+  L K       + LF+ + ++G  PD    N LI+ LC +G    A  
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +  +    +T+T+N +I+GLC + RI EA  +F ++++     N +TFNTLI+GLC
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 198 RTRNTLVALKLFEEMVNE--------FGAI----CKP--------------------DVV 225
           + +    A  L  +M++E        + +I    CK                     DVV
Sbjct: 508 KDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF--- 282
           TY ++I+GLCK G    A ++L  M+ + + P    YN ++      ++ ++A  LF   
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627

Query: 283 ---------------------------------IEMMDNGVQPDVVTFNAMINYNCKDGK 309
                                            +EM+D G  P+  +F  +       G 
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687

Query: 310 MDKVNRLLELMIQR 323
            D   R +E+++++
Sbjct: 688 DDYFIRAIEIIMEK 701


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 153/380 (40%), Positives = 217/380 (57%), Gaps = 3/380 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  F+ M+ M+P P    F  +L+ L KNK Y TV+SLFK+  SNG+ P+L  LN+LIN
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
           C C +   + AF V   IL+  + P+ +T N LI GLC  G I  A     K+       
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + V++ TLINGLC+   T    +L  ++    G   KPDVV Y +II  LCK+  V  A 
Sbjct: 197 DQVSYGTLINGLCKAGETKAVARLLRKLE---GHSVKPDVVMYTTIIHCLCKNKRVGDAC 253

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  +M  + I+PNV TYN+LI GFC + + KEA  L  EM    + PDV TFN +I+  
Sbjct: 254 DLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDAL 313

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K+GK+D+   L E M  + + P+ VTY SL+DG C    + RA  L   M  +G + DV
Sbjct: 314 GKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 373

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           YSY IL++A CK  ++E+A   ++ +L +    +V TYN +++GL + G  GD + L  K
Sbjct: 374 YSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSK 433

Query: 425 MQLNDVVPDSFTFATYIDGL 444
           M+    +PD+ TF T I  L
Sbjct: 434 MEGKGCMPDAITFKTIICAL 453



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 203/402 (50%), Gaps = 3/402 (0%)

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A   F ++ +    P    F+ +++ L + ++ L  + LF++  +       P++ T N 
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNG---VTPNLCTLNI 133

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+  C    +  A  +   +  R  +P+ IT N+LI G C   + K A     +++  G
Sbjct: 134 LINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQG 193

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
            Q D V++  +IN  CK G+   V RLL  +    V PD V Y +++   C   R+  A 
Sbjct: 194 FQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDAC 253

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L+  M+ KG   +V++YN LI   C    +++A  L  EM  + I P V T+N L+  L
Sbjct: 254 DLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDAL 313

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            + G + +A+ L ++M+  ++ P+  T+ + IDGLCKN  +  A+ + + ++    +  +
Sbjct: 314 GKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 373

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            +Y  L++ LCK GRL+ A + F  L  KG   +V T + MI+ LCK G      DL   
Sbjct: 374 YSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSK 433

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           ME K C+P  +TF T++    + ++  K    L +M A  L+
Sbjct: 434 MEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 2/158 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  +EA+  F+ M      P + ++T L+  L KN   +  ++L K++   G+ PD
Sbjct: 315 KEGKI--DEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 372

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++   +L++ LCK G    A      +L   +  N  T+N +INGLC  G   +   L  
Sbjct: 373 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKS 432

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
           K+    C P+ +TF T+I  L        A K   EM+
Sbjct: 433 KMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMI 470


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 160/509 (31%), Positives = 271/509 (53%), Gaps = 8/509 (1%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F+D T + K  +   +SGN    E+++  + M++   +P +   T L+      +     
Sbjct: 83  FRD-TQMLKIFHRSCRSGNYI--ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKA 139

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           V + + L   G  PD+F  N LIN  CKM     A  VL R+    F+P+TVT+N +I  
Sbjct: 140 VRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 198

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
           LC+ G++  A ++  +L    C P V+T+  LI           ALKL +EM++      
Sbjct: 199 LCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG---L 255

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           KPD+ TYN+II G+CK+G VD+A E++  ++ +   P+VI+YN L+        W+E + 
Sbjct: 256 KPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 315

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L  +M      P+VVT++ +I   C+DGK+++   LL+LM ++G+ PD  +Y+ L+  FC
Sbjct: 316 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 375

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GR+  A E   +M+S GC  D+ +YN ++   CK+ K + A+ ++ ++      P+  
Sbjct: 376 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 435

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YNT+ S L+  G+   AL +I +M  N + PD  T+ + I  LC+ G V +A ++   +
Sbjct: 436 SYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDM 495

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           R+C+    + TYN ++ G CK  R++ A  +   +   G  P+  T + +I  +   G  
Sbjct: 496 RSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYR 555

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +A +L  D+   N + SE +F  L R F
Sbjct: 556 AEAMELANDLVRINAI-SEYSFKRLHRTF 583



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 224/441 (50%), Gaps = 4/441 (0%)

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           C+ G    +  +L  ++R  + P+ +    LI G      + +A R+ + L  F   P+V
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
             +N LING C+      A ++ + M ++  +   PD VTYN +I  LC  G +D A ++
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFS---PDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L Q+   N  P VITY  LI          EA  L  EM+  G++PD+ T+N +I   CK
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G +D+   ++  +  +G  PD ++YN L+      G+     +L   M S+ C  +V +
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y+ILI   C+D K+E+A+ L + M  + + P   +Y+ L++   + G L  A++ ++ M 
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            +  +PD   + T +  LCKNG   +A+++F  +    C     +YN + + L   G   
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A  +   +   G  PD +T ++MI  LC+EG +DKA +LL+DM +    PS VT+  +L
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL 511

Query: 547 RGFVQNNKKSKVVVLLHKMAA 567
            GF + ++    + +L  M  
Sbjct: 512 LGFCKAHRIEDAIDVLDSMVG 532



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 193/385 (50%), Gaps = 4/385 (1%)

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR+ N + +L L E MV +      PDV+    +I G      V KA  ++ ++ ++   
Sbjct: 96  CRSGNYIESLHLLETMVRKG---YNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQ 151

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+V  YN+LI GFC ++   +A  +   M      PD VT+N MI   C  GK+D   ++
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L+ ++     P  +TY  L++   L G +  A +L   M+S+G + D+++YN +I   CK
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           +  V+ A  + R +  +   P VI+YN LL  L   G   +  KL+ KM      P+  T
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++  I  LC++G + EA+ + + ++         +Y+ LI   C+ GRL  A +    + 
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G +PD+V  +T++  LCK G+ D+A ++   +    C P+  ++ T+      +  K 
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKV 581
           + + ++ +M +  +   +++ +S +
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMI 476


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 157/474 (33%), Positives = 247/474 (52%), Gaps = 6/474 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            E   F + M     SP + + T L+    K  +      +   L  +G   D+   N+L
Sbjct: 96  EEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVL 155

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK G    A  VL R+     +PN  T++ ++  LC  G++ +A ++  +     C
Sbjct: 156 ISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKC 212

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VVT   LI+  C+      A+KLF EM N+    CKPDVVTYN +I G CK G +D+
Sbjct: 213 YPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKG---CKPDVVTYNVLIKGFCKGGRLDE 269

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A   L ++      P+VI++N ++   C    W +A  L   M+  G  P VVTFN +IN
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           + C+ G + K   +LE+M + G  P++ ++N L+ GFC    I RA E    MVS+GC  
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP 389

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +YNIL+ A CKD KV+DAV +  ++ S+   PS+I+YNT++ GL +VG    A++L+
Sbjct: 390 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 449

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M    + PD  T  + + GL + G V EA++ F  ++          YN +I GLCK 
Sbjct: 450 EEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKS 509

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            +   A      +  KG  P   T +T+I  +  EG  + A+ L  ++ ++  V
Sbjct: 510 QQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLV 563



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 241/490 (49%), Gaps = 10/490 (2%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L  L +N + +      + + + G  PD+     LI   CK+G T  A  ++G +  S  
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
             +  ++N LI+G C  G I EA R+  ++ V    PN  T++ ++  LC       A++
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRMGV---SPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +    +    + C PDVVT   +ID  CK+  V +A +L  +M+++   P+V+TYN LI 
Sbjct: 203 VLGRQLQ---SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIK 259

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GFC      EA     ++   G QPDV++ N ++   C  G+     +LL  M+++G  P
Sbjct: 260 GFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLP 319

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             VT+N L++  C  G + +A  +   M   G   +  S+N LI   C  + ++ A+   
Sbjct: 320 SVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYL 379

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             M+S    P ++TYN LL+ L + G + DA+ ++ ++      P   ++ T IDGL K 
Sbjct: 380 EIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKV 439

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNC--LINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           G    AV++ + +  C   L+ +   C  ++ GL + G+++ A K FH L+     P+  
Sbjct: 440 GKAELAVELLEEM--CYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAF 497

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             +++I  LCK  Q   A D L DM AK C P+E T+ TL++G            L +++
Sbjct: 498 IYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNEL 557

Query: 566 AAEKLVVSDL 575
            +  LV   L
Sbjct: 558 YSRGLVKRSL 567



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 205/438 (46%), Gaps = 12/438 (2%)

Query: 23  WCSFGRPPNPKTDLS----SHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS 78
           +C  GR  N    +     S    D TS    ++   KSG I   EA+   D   +M  S
Sbjct: 124 FCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEI--EEALRVLD---RMGVS 178

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  +L  L    +    + +  R   +  +PD+    +LI+  CK      A  +
Sbjct: 179 PNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL 238

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +      P+ VT+N LI G C  GR+ EA R  KKL  + C P+V++ N ++  LC 
Sbjct: 239 FNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCS 298

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
               + A+KL   M+ +    C P VVT+N +I+ LC+ G + KA  +L  M      PN
Sbjct: 299 GGRWMDAMKLLATMLRKG---CLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 355

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             ++N LI GFC       A      M+  G  PD+VT+N ++   CKDGK+D    +L 
Sbjct: 356 SRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 415

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            +  +G +P  ++YN+++DG   VG+   A EL   M  KG + D+ +   ++    ++ 
Sbjct: 416 QLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREG 475

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           KV +A+  +  +    IRP+   YN++++GL +      A+  +  M      P   T+ 
Sbjct: 476 KVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYT 535

Query: 439 TYIDGLCKNGFVLEAVQV 456
           T I G+   G   +A ++
Sbjct: 536 TLIKGITYEGLAEDASKL 553



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 207/396 (52%), Gaps = 9/396 (2%)

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +  E M N+  +   PDV+   ++I   CK G    A +++  +++     +V +YN LI
Sbjct: 100 RFLEYMTNKGKS---PDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLI 156

Query: 267 CGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
            G+C   + +EA    + ++D  GV P+  T++A++   C  GK+ +  ++L   +Q   
Sbjct: 157 SGYCKSGEIEEA----LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKC 212

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD VT   L+D  C    + +A +LF  M +KGC+ DV +YN+LI   CK  ++++A+ 
Sbjct: 213 YPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIR 272

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
             +++ S   +P VI++N +L  L   G   DA+KL+  M     +P   TF   I+ LC
Sbjct: 273 FLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLC 332

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           + G + +A+ V + +          ++N LI G C    +  A +    +  +G  PD+V
Sbjct: 333 QKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIV 392

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T + ++  LCK+G++D A  +L  + +K C PS +++ T++ G ++  K    V LL +M
Sbjct: 393 TYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 452

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             + L   DL   + VV  LS++ K RE +  F +L
Sbjct: 453 CYKGL-KPDLITCTSVVGGLSREGKVREAMKFFHYL 487


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 172/561 (30%), Positives = 276/561 (49%), Gaps = 47/561 (8%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV----- 100
            + +F+ + ++SG++   +A+  FD +++      + +   LLT +A+     +V     
Sbjct: 64  ELEQFIGECYRSGDLGPEDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPA 123

Query: 101 --VSLFKRLNSNG---LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
             VS+F R+   G   + PD+    +LI+C C  G  +  F  LG+I+++      VTF 
Sbjct: 124 LAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFT 183

Query: 156 FLINGLCAEGRIMEAARL-FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
            L+  LCAE R  +A  +  +++    C P+V ++ TL+ GLC  +    A +L   M+ 
Sbjct: 184 PLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELI-HMMA 242

Query: 215 EFGAICKPDVVTY-----------------------------------NSIIDGLCKDGF 239
           E G  C P+VV+Y                                   NS+IDGLCK   
Sbjct: 243 EDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA 302

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +DKA+ +L QM D +I PN  TYNSLI G+     W EA  +  EM  +G +P+VVT++ 
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSM 362

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  CK G   +   +   MIQ G  P+  TY SL+ G+   G +     +   MV  G
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG 422

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            R   + +NI I A CK  ++++A   + +M  +   P ++ Y T++ GL ++G L DA+
Sbjct: 423 MRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAM 482

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
               +M  + + PD  TF T I G   +G   +A ++F  + +      + T+N +I+ L
Sbjct: 483 SRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKL 542

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
            K G++  A KLF  +   G  P+VV+ +TMIH     G++ +   LL DM      P+ 
Sbjct: 543 FKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTA 602

Query: 540 VTFCTLLRGFVQNNKKSKVVV 560
           VTF TLL G V    K  VV 
Sbjct: 603 VTFNTLLDGMVSMGLKPDVVT 623



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 190/366 (51%), Gaps = 22/366 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A      MI     P  T++  L+     + Q+   V + K ++ +G  P++   ++L
Sbjct: 304 DKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSML 363

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+CLCK G+ + A  +   +++S   PN  T+  L++G   EG +++   +   +     
Sbjct: 364 IDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGM 423

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P    FN  I   C+      A   F +M  + G +  PD+V Y ++IDGLCK G +D 
Sbjct: 424 RPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQ-GFM--PDIVAYTTVIDGLCKIGRLDD 480

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A     QM D  ++P++IT+N+LI GF     W++A+ LF EMMD G+ P+V TFN+MI+
Sbjct: 481 AMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMID 540

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV--------- 353
              K+GK+ +  +L +LM + G  P+ V+YN+++ G+ + G +    +L           
Sbjct: 541 KLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKP 600

Query: 354 ----------SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
                      MVS G + DV +   LI++ C+D ++ED + L+REML +  +   IT N
Sbjct: 601 TAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 660

Query: 404 TLLSGL 409
             L G+
Sbjct: 661 IKLRGV 666


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 256/488 (52%), Gaps = 3/488 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+    + ++       F+ L S G    +   N L+  L K+     A+ V   ++
Sbjct: 51  FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           RS    N  T N ++N LC +G+  +      ++       ++VT+NTLI   CR     
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A ++   M ++     KP + TYN+II+GLCK G   +AK +L++M +  ++P+  TYN
Sbjct: 171 EAFEIMNSMADKG---LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYN 227

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +L+   C  D++ EAK +F EM+  GV PD+V+F+++I    ++  +D+       M + 
Sbjct: 228 TLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKF 287

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD V Y  LM G+C  G +  A ++   M+ +GC  DV +YN ++N  CK++ + DA
Sbjct: 288 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA 347

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+ EM+     P   T+ TL+ G  Q GN+  AL L   M   ++ PD   + T IDG
Sbjct: 348 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDG 407

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK G + +A +++  + + K      TY  LIN  C +G +  A +L+  +  KG  P 
Sbjct: 408 FCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 467

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +VTC+T+I   C+ G   KA++ L  M AK   P  +++ TL+ GFV+ +   K  + ++
Sbjct: 468 LVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWIN 527

Query: 564 KMAAEKLV 571
           KM  E L+
Sbjct: 528 KMEKEGLL 535



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 247/471 (52%), Gaps = 3/471 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++  L K+ ++D V S    +  NG++ D+   N LI   C+ G+   AF ++  +
Sbjct: 120 TLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSM 179

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P+  T+N +INGLC +GR   A  +  ++      P+  T+NTL+   CR  N 
Sbjct: 180 ADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNF 239

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A ++F EM+ + G +  PD+V+++S+I    ++  +D+A      MK   + P+ + Y
Sbjct: 240 SEAKEIFGEMLRQ-GVV--PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 296

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             L+ G+C   +  EA  +  EM++ G   DV+ +N ++N  CK+  +   ++L + M++
Sbjct: 297 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 356

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RG  PD  T+ +L+ G C  G +++A  LF +M  +  + D+ +YN LI+  CK  ++E 
Sbjct: 357 RGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEK 416

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+  M+S +I P+ ITY  L++    VG++ +A +L D M    + P   T  T I 
Sbjct: 417 ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 476

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G C++G   +A +    +          +YN LING  +   +  A    ++++ +G +P
Sbjct: 477 GYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLP 536

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           D++T + +++  C++G+M +A  +L  M  K   P   T+  L+ G V  +
Sbjct: 537 DIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQD 587



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 237/460 (51%), Gaps = 3/460 (0%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           M ++  L+    +    +    +   +   GL P LF  N +IN LCK G  + A  +L 
Sbjct: 153 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 212

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            +L    +P+T T+N L+   C      EA  +F ++      P++V+F++LI    R R
Sbjct: 213 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNR 272

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           +   AL  F +M  +FG +  PD V Y  ++ G C++G + +A ++  +M ++    +VI
Sbjct: 273 HLDQALVYFRDM-KKFGLV--PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 329

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            YN+++ G C      +A  LF EM++ G  PD  TF  +I+ +C+DG M K   L   M
Sbjct: 330 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 389

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            QR + PD V YN+L+DGFC VG + +A EL+  M+S+    +  +Y ILINA C    V
Sbjct: 390 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 449

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
            +A  L+  M+ + I+P+++T NT++ G  + G+   A + + +M    V PD  ++ T 
Sbjct: 450 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 509

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+G  +   + +A      +        I TYN ++NG C+ GR++ A  +  ++  KG 
Sbjct: 510 INGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGI 569

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
            PD  T + +I+    +  +++A     +M  +   P +V
Sbjct: 570 NPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 219/442 (49%), Gaps = 3/442 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    + M      P + ++  ++  L K  +Y     +   + + GL PD    N L+
Sbjct: 171 EAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 230

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+    S A  + G +LR    P+ V+F+ LI        + +A   F+ +  F   
Sbjct: 231 VESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLV 290

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ V +  L++G CR  N L ALK+ +EM+ +    C  DV+ YN+I++GLCK+  +  A
Sbjct: 291 PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG---CVLDVIAYNTILNGLCKEKMLTDA 347

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L  +M +R   P+  T+ +LI G C   +  +A  LF  M    ++PD+V +N +I+ 
Sbjct: 348 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDG 407

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+M+K + L + MI R + P+ +TY  L++ +C VG +S A  L+  M+ KG +  
Sbjct: 408 FCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 467

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + + N +I   C+      A      M+++ + P  I+YNTL++G  +  N+  A   I+
Sbjct: 468 LVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWIN 527

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           KM+   ++PD  T+   ++G C+ G + EA  V + +          TY  LING     
Sbjct: 528 KMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQD 587

Query: 484 RLKTACKLFHRLQHKGPIPDVV 505
            L  A +    +  +G  PD V
Sbjct: 588 NLNEAFRFHDEMLQRGFAPDDV 609



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 196/371 (52%), Gaps = 3/371 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M++    P + SF+ L+ + ++N+  D  +  F+ +   GL PD  +  +L
Sbjct: 240 SEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVL 299

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C+ G    A  +   +L      + + +N ++NGLC E  + +A +LF ++     
Sbjct: 300 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 359

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  TF TLI+G C+  N   AL LF  M        KPD+V YN++IDG CK G ++K
Sbjct: 360 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN---IKPDIVAYNTLIDGFCKVGEMEK 416

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL   M  R I PN ITY  LI  +C V    EA  L+  M++ G++P +VT N +I 
Sbjct: 417 ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 476

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ G   K +  L  MI +GV PD ++YN+L++GF     + +A      M  +G   
Sbjct: 477 GYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLP 536

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +YN+++N  C+  ++++A  + R+M+ + I P   TY  L++G     NL +A +  
Sbjct: 537 DIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFH 596

Query: 423 DKMQLNDVVPD 433
           D+M      PD
Sbjct: 597 DEMLQRGFAPD 607



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 1/257 (0%)

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           NSL+ G   +  +  A E+   +V  G   +VY+ NI++NA CKD K +D      EM  
Sbjct: 87  NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG 146

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I   ++TYNTL+    + G L +A ++++ M    + P  FT+   I+GLCK G    
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A  +   + N        TYN L+   C+      A ++F  +  +G +PD+V+ S++I 
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA 266

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
              +   +D+A     DM+    VP  V +  L+ G+ +N    + + +  +M  E+  V
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM-LEQGCV 325

Query: 573 SDLSLSSKVVDLLSKDK 589
            D+   + +++ L K+K
Sbjct: 326 LDVIAYNTILNGLCKEK 342



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 116/244 (47%)

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + + ++ L+  +    ++    E F  + SKG    + + N L+    K   VE A  ++
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           RE++   I  +V T N +++ L + G   D    + +M+ N +  D  T+ T I   C+ 
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + EA ++  ++ +   +  + TYN +INGLCK GR   A  +   + + G  PD  T 
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +T++   C+     +A ++  +M  +  VP  V+F +L+  F +N    + +V    M  
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286

Query: 568 EKLV 571
             LV
Sbjct: 287 FGLV 290



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 66/141 (46%)

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           E  + F+ +R+    + I   N L+ GL K+  ++ A ++   +   G   +V T + M+
Sbjct: 66  EGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMV 125

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           + LCK+G+ D     L +ME        VT+ TL+  + +     +   +++ MA + L 
Sbjct: 126 NALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLK 185

Query: 572 VSDLSLSSKVVDLLSKDKKYR 592
            S  + ++ +  L  K +  R
Sbjct: 186 PSLFTYNAIINGLCKKGRYAR 206


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 174/560 (31%), Positives = 278/560 (49%), Gaps = 42/560 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F  L+  L +  Q  T V + + ++S+G+ PD      L+    + G    A  V
Sbjct: 183 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV 242

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             R+L    +P  VT N LING C  GR+ +A    ++      +P+ +T+NT +NGLC+
Sbjct: 243 KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQ 302

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   ALK+ + MV E      PDV TYN +++ LCK+G +++AK +L QM +R   P+
Sbjct: 303 NGHVGHALKVMDVMVQEGH---DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPD 359

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           + T+N+LI   C  +  +EA  L  ++   G+ PDV TFN +IN  CK G      RL E
Sbjct: 360 ITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFE 419

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M   G  PD VTYN+L+D  C +G++ +A +L   M S GC     +YN +I+  CK  
Sbjct: 420 EMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKM 479

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           ++E+A  ++ +M  + I  + IT+NTL+ GL +   + DA +LI +M    + P++ T+ 
Sbjct: 480 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYN 539

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +   CK G + +A  + Q +     E+ + TY  LINGLCK GR + A KL   ++ K
Sbjct: 540 SILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 599

Query: 499 G---------PI--------------------------PDVVTCSTMIHWLCK-EGQMDK 522
           G         P+                          PD  T   +   LC+  G + +
Sbjct: 600 GMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIRE 659

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A D LL+M  K  +P   +F  L  G + N       +   ++  EK  + D  +S+  +
Sbjct: 660 AFDFLLEMVDKGFIPEFSSFRMLAEGLL-NLGMDDYFIRAIEIIIEKADLGDSDVSA--I 716

Query: 583 DLLSKDKKYRECLNQFRHLL 602
               K +K+ + L  F  LL
Sbjct: 717 RGYLKIRKFYDALATFGRLL 736



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 247/452 (54%), Gaps = 4/452 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +TV +N L+N L    ++     ++ ++      P+VVTFNTL+  LCR      A+ + 
Sbjct: 149 DTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLML 208

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           EEM +   A   PD  T+ +++ G  ++G +  A  +  +M +   +P  +T N LI G+
Sbjct: 209 EEMSSSGVA---PDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGY 265

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C +   ++A     + + NG +PD +T+N  +N  C++G +    +++++M+Q G +PD 
Sbjct: 266 CKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDV 325

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN +++  C  G++  A+ +   MV +GC  D+ ++N LI A C   ++E+A+ L R+
Sbjct: 326 FTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQ 385

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           +  + + P V T+N L++ L +VG+   AL+L ++M+ +   PD  T+ T ID LC  G 
Sbjct: 386 VTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGK 445

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A+ + + + +  C     TYN +I+GLCK  R++ A ++F ++  +G   + +T +T
Sbjct: 446 LGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 505

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I  LCK+ ++D AN L+  M ++   P+ +T+ ++L  + +     K   +L  M A  
Sbjct: 506 LIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANG 565

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             V D+     +++ L K  + +  L   R +
Sbjct: 566 FEV-DVVTYGTLINGLCKAGRTQVALKLLRGM 596



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 186/365 (50%), Gaps = 4/365 (1%)

Query: 239 FVDKAKELLLQMKDR--NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           FVD A +L+L   D    I  + + YN L+         K  + ++ EM + G++PDVVT
Sbjct: 129 FVD-AVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVT 187

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           FN ++   C+  ++     +LE M   GV PD  T+ +LM GF   G I  A  +   M+
Sbjct: 188 FNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARML 247

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             GC     + N+LIN  CK  +VEDA+   ++ ++    P  ITYNT ++GL Q G++G
Sbjct: 248 EMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVG 307

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            ALK++D M      PD FT+   ++ LCKNG + EA  +   +    C   I T+N LI
Sbjct: 308 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLI 367

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
             LC   RL+ A  L  ++  KG  PDV T + +I+ LCK G    A  L  +M++  C 
Sbjct: 368 VALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCT 427

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           P EVT+ TL+       K  K + LL +M +     S ++ ++ ++D L K  +  E   
Sbjct: 428 PDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNT-IIDGLCKKMRIEEAEE 486

Query: 597 QFRHL 601
            F  +
Sbjct: 487 VFDQM 491



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 185/359 (51%), Gaps = 6/359 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +   EA    + M++    P +T+F  L+  L    + +  + L +++   GL PD
Sbjct: 337 KNGQL--EEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPD 394

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N+LIN LCK+G    A  +   +  S  TP+ VT+N LI+ LC+ G++ +A  L K
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 454

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++    C  + VT+NT+I+GLC+      A ++F++M  +   I + + +T+N++IDGLC
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQM--DLQGISR-NAITFNTLIDGLC 511

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           KD  +D A +L+ QM    + PN ITYNS++  +C   D K+A  +   M  NG + DVV
Sbjct: 512 KDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVV 571

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +IN  CK G+     +LL  M  +G+      YN ++           A  LF  M
Sbjct: 572 TYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREM 631

Query: 356 VSKGCRHDVYSYNILINANCK-DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
              G   D ++Y I+    C+    + +A     EM+ +   P   ++  L  GL  +G
Sbjct: 632 TEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLG 690


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 166/539 (30%), Positives = 272/539 (50%), Gaps = 7/539 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  F   M+     P   ++  L+   +   Q+   V +FK +    + PD+  LN L
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL 332

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LCK G    A  V   +      P+  ++  ++NG   +G +++   LF  +     
Sbjct: 333 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P + TFN LI           A+ +F EM +      KP VVTY ++I  LC+ G +D 
Sbjct: 393 APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG---VKPHVVTYMTVIAALCRIGKMDD 449

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E   QM D+ + P+   Y+ LI GFC      +AK L  E+M+NG++ D+V F ++IN
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++     + +L +  G++PD V YN LMDG+CLVG++ +A  +F +MVS G   
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V  Y  L+N  CK  ++++ + L+REML + I+PS I YN ++ GLF+ G    A    
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 629

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M  + +  +  T++  + GL KN    EA+ +F+ +R    ++ I T N +I G+ + 
Sbjct: 630 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 689

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            R++ A  LF  +   G +P  VT S MI  L KEG +++A D+   M+   C P     
Sbjct: 690 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 749

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             ++R  ++ N+  +    L K+      +  L+ +  +VDL S     RE   Q R L
Sbjct: 750 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT-AMLLVDLFSSKGTCRE---QIRFL 804



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 255/491 (51%), Gaps = 6/491 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           SP   ++ IL+    +  + +  ++ F +L   GL  D  + + L+   C+   T  A  
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           ++L R       P+  ++N L+  LC +G+  +A  L + +      C P+VV +NT+I+
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A  LF+EMV        PD+VTY+S++  LCK   +DKA+  L QM ++ 
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRG---IPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + P+  TYN+LI G+     WKEA  +F EM    + PDVV  N ++   CK GK+ +  
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + M  +G NPD  +Y  +++G+   G +    +LF  M+  G    + ++N+LI A 
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 406

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
                ++ A+ ++ EM    ++P V+TY T+++ L ++G + DA++  ++M    VVPD 
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 466

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           + +   I G C +G +L+A ++   I N    L I  +  +IN LCK+GR+  A  +F  
Sbjct: 467 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL 526

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             + G  PD V  + ++   C  G+M+KA  +   M +    P+ V + TL+ G+ +  +
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 586

Query: 555 KSKVVVLLHKM 565
             + + L  +M
Sbjct: 587 IDEGLSLFREM 597



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 181/397 (45%), Gaps = 3/397 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F+ M      P + ++  ++  L +  + D  +  F ++   G+ PD +  + L
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 472

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C  G    A  ++  I+ +    + V F  +IN LC  GR+M+A  +F        
Sbjct: 473 IQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL 532

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ V +N L++G C       AL++F+ MV+   A  +P+VV Y ++++G CK G +D+
Sbjct: 533 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS---AGIEPNVVGYGTLVNGYCKIGRIDE 589

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              L  +M  + I P+ I YN +I G         AK  F EM ++G+  +  T++ ++ 
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 649

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+   D+   L + +    V  D +T N+++ G     R+  A++LF S+   G   
Sbjct: 650 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
              +Y+I+I    K+  VE+A  ++  M +    P     N ++  L +   +  A   +
Sbjct: 710 CAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYL 769

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            K+   +   +  T    +D     G   E ++   A
Sbjct: 770 SKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPA 806



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 38/266 (14%)

Query: 323 RGVNPDTVTYNSLMD-----------------------------------GFCLVGRISR 347
           R ++P + TY  LMD                                   GFC   R   
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 348 ARELFVSMVSK-GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI--RPSVITYNT 404
           A ++ +    + GC  DV+SYNIL+ + C   K   A  L R M        P V+ YNT
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           ++ G F+ G++  A  L  +M    + PD  T+++ +  LCK   + +A    + + N  
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                 TYN LI G    G+ K A ++F  ++ +  +PDVV  +T++  LCK G++ +A 
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFV 550
           D+   M  K   P   ++  +L G+ 
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYA 372



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 4/237 (1%)

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK-LID 423
           Y+Y IL++   +  + E A+  + ++L   +R   I  + LL G  +     +AL  L+ 
Sbjct: 114 YTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLH 173

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ--AIRNCKCELRIETYNCLINGLCK 481
           +      VPD F++   +  LC  G   +A  + +  A     C   +  YN +I+G  K
Sbjct: 174 RTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFK 233

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G +  AC LF  +  +G  PD+VT S+++H LCK   MDKA   L  M  K  +P   T
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           +  L+ G+    +  + V +  +M  + ++   ++L++ ++  L K  K +E  + F
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT-LMGSLCKYGKIKEARDVF 349


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 278/532 (52%), Gaps = 11/532 (2%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           T + + L DR +       +A+   D M++    P + ++T+LL  + +N  ++  +++ 
Sbjct: 147 TPLIRVLCDRGRVA-----DALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVL 201

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
             + + G  P++   N++IN +C+ G    A  +L R+    F P+TV++  L+ GLCA 
Sbjct: 202 DEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCAS 261

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
            R  +   LF ++    C PN VTF+ LI   CR      A+++ E+M  E G  C  + 
Sbjct: 262 KRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT-EHG--CATNT 318

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
              N +I+ +CK G VD A +LL  M     NP+ I+Y +++ G C  + W +AK L  E
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNE 378

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+ N   P+ VTFN  I   C+ G +++   L+E M + G     VTYN+L++GFC+ G 
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           I  A ELF SM    C+ +  +Y  L+   C  ++++ A  L  EML     P+V+T+N 
Sbjct: 439 IDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNV 495

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+S   Q G L +A++L+++M  +   P+  T+ T +DG+ K+    +A+++   + +  
Sbjct: 496 LVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKG 555

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + T++ +I  L K  R++ A +LFH +Q  G  P  V  + ++  LCK  ++D A 
Sbjct: 556 VSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAI 615

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           D    M +  C+P+E T+  L+ G        +   LL  + +  ++  +L+
Sbjct: 616 DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNLT 667



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 151/522 (28%), Positives = 266/522 (50%), Gaps = 10/522 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P +   T L+  L +  +      + +    +G   D+F  N L+   C+ G    A  
Sbjct: 73  APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 132

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           ++G +      P+  T+  LI  LC  GR+ +A  L   +    C PNVVT+  L+  +C
Sbjct: 133 LIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 189

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R      A+ + +EM  +    C P++VTYN II+G+C++G VD A+ELL ++      P
Sbjct: 190 RNSGFEQAMAVLDEMRAKG---CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQP 246

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + ++Y +L+ G C    W + + LF EMM+    P+ VTF+ +I + C+ G +++  ++L
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 306

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M + G   +T   N +++  C  GR+  A +L   M S GC  D  SY  ++   C+ 
Sbjct: 307 EQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRA 366

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           ++ +DA  L  EM+     P+ +T+NT +  L Q G +  A+ LI++M  +       T+
Sbjct: 367 ERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTY 426

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              ++G C  G +  A+++F   R+  C+    TY  L+ GLC   RL  A +L   +  
Sbjct: 427 NALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLR 483

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
               P+VVT + ++ + C++G +++A +L+  M    C P+ +T+ TLL G  ++     
Sbjct: 484 GDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSED 543

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
            + LLH + + K V  D+   S ++ +LSK+ +  E +  F 
Sbjct: 544 ALELLHGLVS-KGVSPDVITFSSIIGILSKEDRIEEAVQLFH 584



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 237/496 (47%), Gaps = 41/496 (8%)

Query: 89  TMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT 148
           T++A   +Y  + +  + + S  + PD +    LI  LC  G  + A  +L  +LR    
Sbjct: 116 TLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ 175

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN VT+  L+  +C      +A  +  ++    C PN+VT+N +ING+CR      A +L
Sbjct: 176 PNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREL 235

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
              + + +G   +PD V+Y +++ GLC     D  +EL  +M ++N  PN +T++ LI  
Sbjct: 236 LNRLPS-YGF--QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           FC     + A  +  +M ++G   +    N +IN  CK G++D   +LL  M   G NPD
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMV-------------------------------- 356
           T++Y +++ G C   R   A+EL   MV                                
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 412

Query: 357 ---SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
                GC   V +YN L+N  C    ++ A+ L+R M     +P+ ITY TLL+GL    
Sbjct: 413 QMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAE 469

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L  A +L+ +M   D  P+  TF   +   C+ GF+ EA+++ + +    C   + TYN
Sbjct: 470 RLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYN 529

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            L++G+ K    + A +L H L  KG  PDV+T S++I  L KE ++++A  L   ++  
Sbjct: 530 TLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDI 589

Query: 534 NCVPSEVTFCTLLRGF 549
              P  V +  +L G 
Sbjct: 590 GMRPKAVVYNKILLGL 605


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 149/459 (32%), Positives = 251/459 (54%), Gaps = 5/459 (1%)

Query: 97  YDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT--PNTVTF 154
           + + V + + L+  G   D+   NL++N +C  G +    + L R L + F   P+ V++
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N ++ GLC   R      L +++    C PNVVTFNTLI  LCR        ++  +MV+
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                C PD+  Y +++DG+CK+G ++ A E+L +M    + PNV+ YN+++ G C  + 
Sbjct: 289 HG---CTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAER 345

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           W++A+ L  EM DN    D VTFN ++++ C++G + +V  LLE M++ G  PD +TY +
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTT 405

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           +++GFC  G I  A  L  SM + GCR +  SY I++   C  ++  DA  L  +M+ + 
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQG 465

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
             P+ +T+NT+++ L + G +  A++L+ +M LN   PD  +++T IDGL K G   EA+
Sbjct: 466 CSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEAL 525

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           ++   + N         Y+ + + L K GR+    ++F  +Q      D V  + +I  L
Sbjct: 526 ELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSL 585

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           CK G  D+A + L  M +  C+P+E T+  L+RG     
Sbjct: 586 CKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEG 624



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 241/484 (49%), Gaps = 6/484 (1%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N +++  C+ G  + A  +   +      PN  T+  ++  LCA GRI +A  +  ++  
Sbjct: 87  NAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMRR 143

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC-KDG 238
             C P    ++ ++   C              + +  G  C  DV   N +++ +C + G
Sbjct: 144 RGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGG 203

Query: 239 FVDKAKELLLQMKDR-NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
            VD+A  LL  +      +P+V++YN+++ G C    W   + L  EM+  G  P+VVTF
Sbjct: 204 SVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTF 263

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +I Y C++G  ++V+++L  M+  G  PD   Y +++DG C  G +  A E+   M S
Sbjct: 264 NTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            G + +V  YN ++   C  ++ E A  L  EM         +T+N L+    Q G +  
Sbjct: 324 YGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYR 383

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
            ++L+++M  +  VPD  T+ T I+G CK G + EAV + +++  C C     +Y  ++ 
Sbjct: 384 VIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLK 443

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           GLC   R   A  L  ++  +G  P+ VT +T+I++LCK+G +++A +LL  M    C P
Sbjct: 444 GLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSP 503

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
             +++ T++ G  +  K  + + LL+ M  + +  + +  SS +   LSK+ +    +  
Sbjct: 504 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS-IASALSKEGRINRVIQM 562

Query: 598 FRHL 601
           F ++
Sbjct: 563 FDNI 566



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 208/389 (53%), Gaps = 3/389 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+++   P + +F  L+  L +N  ++ V  +  ++  +G  PD+ +   +++ +CK G 
Sbjct: 251 MVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGH 310

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L R+      PN V +N ++ GLC+  R  +A  L  ++    C  + VTFN 
Sbjct: 311 LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNI 370

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++  C+       ++L E+M+ E G  C PDV+TY ++I+G CK+G +D+A  LL  M 
Sbjct: 371 LVDFFCQNGLVYRVIELLEQML-EHG--CVPDVITYTTVINGFCKEGLIDEAVMLLKSMA 427

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                PN I+Y  ++ G C  + W +A+ L  +M++ G  P+ VTFN +IN+ CK G ++
Sbjct: 428 ACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVE 487

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL+ M+  G +PD ++Y++++DG    G+   A EL   MV+KG   +   Y+ + 
Sbjct: 488 QAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 547

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +A  K+ ++   + ++  +    IR   + YN ++S L + G    A++ +  M  +  +
Sbjct: 548 SALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCM 607

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           P+  T+   I GL   GFV EA ++   +
Sbjct: 608 PNESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 213/423 (50%), Gaps = 3/423 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+  +L  L   K++  V  L + +   G  P++   N LI  LC+ G+      V
Sbjct: 223 PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQV 282

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L +++    TP+   +  +++G+C EG +  A  +  ++  +   PNVV +NT++ GLC 
Sbjct: 283 LAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCS 342

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A +L  EM   F   C  D VT+N ++D  C++G V +  ELL QM +    P+
Sbjct: 343 AERWEQAEELLAEM---FDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPD 399

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           VITY ++I GFC      EA  L   M   G +P+ +++  ++   C   +      L+ 
Sbjct: 400 VITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMS 459

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MI++G +P+ VT+N++++  C  G + +A EL   M+  GC  D+ SY+ +I+   K  
Sbjct: 460 QMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAG 519

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K ++A+ L   M+++ + P+ I Y+++ S L + G +   +++ D +Q   +  D+  + 
Sbjct: 520 KTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYN 579

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I  LCK G    A++    + +  C     TY  LI GL   G +K A ++   L  K
Sbjct: 580 AVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSK 639

Query: 499 GPI 501
           G +
Sbjct: 640 GAL 642



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 189/417 (45%), Gaps = 44/417 (10%)

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN+++ G C+ G +  A+ L   +    + PN  TY  ++   C      +A  +  EM 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 287 DNGVQP--------------------------------------DVVTFNAMINYNC-KD 307
             G  P                                      DV   N ++N  C + 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 308 GKMDKVNRLL-ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           G +D+  RLL +L    G +PD V+YN+++ G C+  R  R ++L   MV  GC  +V +
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           +N LI   C++   E    +  +M+     P +  Y T+L G+ + G+L  A +++D+M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              + P+   + T + GLC      +A ++   + +  C L   T+N L++  C+ G + 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
              +L  ++   G +PDV+T +T+I+  CKEG +D+A  LL  M A  C P+ +++  +L
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
           +G     +      L+ +M  +    + ++ ++ V++ L K     + +   + +L 
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNT-VINFLCKKGLVEQAIELLKQMLL 498



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 3/227 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV     M      P   S+TI+L  L   +++     L  ++   G  P+    N +
Sbjct: 417 DEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTV 476

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LCK G+   A  +L ++L +  +P+ ++++ +I+GL   G+  EA  L   +     
Sbjct: 477 INFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 536

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN + ++++ + L +       +++F+ + +      + D V YN++I  LCK G  D+
Sbjct: 537 SPNTIIYSSIASALSKEGRINRVIQMFDNIQD---VTIRSDAVLYNAVISSLCKRGGTDR 593

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           A E L  M      PN  TY  LI G       KEA+ +  E+   G
Sbjct: 594 AIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 2/135 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  ++   K+G   ++EA+   + M+    SP    ++ + + L+K  + + V+ 
Sbjct: 504 DLISYSTVIDGLGKAGK--TDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQ 561

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +    +  D  + N +I+ LCK G T  A   L  ++ S   PN  T+  LI GL 
Sbjct: 562 MFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLA 621

Query: 163 AEGRIMEAARLFKKL 177
           +EG + EA  +  +L
Sbjct: 622 SEGFVKEAQEMLTEL 636


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 169/574 (29%), Positives = 288/574 (50%), Gaps = 41/574 (7%)

Query: 65  AVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           A+ FFD   +       + S+  LL +L K+  +     ++K L  +G  P+L    +LI
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CK G    A   L  +      P+   FN LI+GL  +G   +A +LF+ +      
Sbjct: 70  RGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVK 129

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID----------- 232
           P +VT+NT+I+GLC++ N   A +L EEM+ + G    PD+VTYN++I+           
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEMIRK-GGKSAPDIVTYNTLINAFYRASRIREA 188

Query: 233 ------------------------GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
                                   G+CKDG V++A E+L  MK     P+VITYNS+I  
Sbjct: 189 CAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHA 248

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C      EA  +   M      PD+VTFN +++  CK G + +   +LE M +  + PD
Sbjct: 249 LCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +TY  L++G C VG++  A  L   +V +G   DV +Y  L++  CK  ++E+A  L +
Sbjct: 306 VITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVK 365

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM     R  V+ Y++L+SG  + GN+  A +++ +M   ++VP  FT+   + GL K+G
Sbjct: 366 EMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDG 425

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + +AV +   +        + TYN LI+GLCK  R++ AC L   +  +G  P+ VT  
Sbjct: 426 SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLG 485

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +++  LC+ G++D A  L+++M  K   P+ V + +L+ G  ++++     ++L  M  +
Sbjct: 486 SVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQ 545

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            + + D +    +V  +S   +  E +  +  ++
Sbjct: 546 GVALDDFAYRKLIVS-MSHGGRVAEAMAMYDEMV 578



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 165/546 (30%), Positives = 272/546 (49%), Gaps = 21/546 (3%)

Query: 37  SSHHFKDGTSIAKFLNDRHKSGNIT-------------SNEAVYFFDCMIKMKPSPGMTS 83
           S HHF+ G      L+       +T             +  A+ F   + +   +P +  
Sbjct: 40  SGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYI 99

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+  L K+   D  V LF+ + S+ + P++   N +I+ LCK G    A  +L  ++
Sbjct: 100 FNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMI 159

Query: 144 RSC--FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           R      P+ VT+N LIN      RI EA    +K+     +P+V+T N L++G+C+  +
Sbjct: 160 RKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGD 219

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              AL++ + M    G +  PDV+TYNSII  LC  G V +A E+L  M   + +P+++T
Sbjct: 220 VEEALEILDGM-KLAGPV--PDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVT 273

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +N+L+ GFC       A  +  EM    + PDV+T+  ++N  C+ G++     LLE ++
Sbjct: 274 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 333

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           ++G  PD + Y SL+DG C  G I  A +L   M  +GCR  V  Y+ L++  C+   V 
Sbjct: 334 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVH 393

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A  +  EM+S  + P + TYN +L GL + G++  A+ LI  +     VPD  T+ T I
Sbjct: 394 KAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLI 453

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCK   V EA  +   + +  C     T   ++ GLC++GR+  A  L   +  K   
Sbjct: 454 DGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHA 513

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P+VV  +++I  LCK  +MD A  +L  M  +     +  +  L+       + ++ + +
Sbjct: 514 PNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAM 573

Query: 562 LHKMAA 567
             +M A
Sbjct: 574 YDEMVA 579


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 154/471 (32%), Positives = 256/471 (54%), Gaps = 11/471 (2%)

Query: 99  TVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF-TPNTVTFNFL 157
             + L + + S G  PD F    +I  +   G   GA       LRS    PN VT+  L
Sbjct: 8   AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM----DHLRSMGCDPNVVTYTAL 63

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           I       ++ EA +L +++    C PN+VT+N L++ LC+      A  + ++M+    
Sbjct: 64  IAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 123

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
           A   P+V+T+NS++DG CK G VD A++LL  M  + + PNV+TY++LI G C    + E
Sbjct: 124 A---PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           AK +  EM  +GV PD  T++A+I+  CK  K+++  ++L  M   G  PD V Y+S++ 
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML-SERIR 396
            FC  G++  A++    M  +    DV +YN +I+  CK  K+ +A  +  +M  S  + 
Sbjct: 241 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVL 300

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P V+TY+T+++GL +   L +A KL+D+M      PD  T+ T IDGLCK G + EA  +
Sbjct: 301 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL 360

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
            Q ++   C   + TY  LI+GLCK  ++  A ++   +++ G  P++VT +TM++ LC 
Sbjct: 361 LQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCV 420

Query: 517 EGQMDKANDLLLDME--AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            G++ +A  L+  M+     C P   T+ T++   + ++   +   LL +M
Sbjct: 421 SGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 233/427 (54%), Gaps = 35/427 (8%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
            D +  M   P + ++T L+   A+ K+ +  + L + +   G  P+L   N+L++ LCK
Sbjct: 45  MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 104

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
           + +   A  V+ +++   F PN +TFN L++G C  G + +A +L   +      PNVVT
Sbjct: 105 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 164

Query: 189 FNTLINGLCRTRNTLVALKLFEEM------------------------VNE--------F 216
           ++ LI+GLC+++  L A ++ EEM                        + E         
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 224

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
           G+ C PDVV Y+SII   CK G + +A++ L +M+ +  +P+V+TYN++I G C +    
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 284

Query: 277 EAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           EA+ +  +M ++G V PDVVT++ +IN  CK   + +  +LL+ M + G NPD VTY ++
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 344

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +DG C  GR+  A  L   M   GC  +V +Y  LI+  CK +KV++A  +  EM +   
Sbjct: 345 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 404

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQ--LNDVVPDSFTFATYIDGLCKNGFVLEA 453
            P+++TYNT+++GL   G + +A +L+ +M+    +  PD+ T+ T ++ L  +  V EA
Sbjct: 405 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 464

Query: 454 VQVFQAI 460
            Q+ + +
Sbjct: 465 EQLLEQM 471



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 201/370 (54%), Gaps = 7/370 (1%)

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C   +   AL+L EEM +   A   PD  T+  II  +   G +D A + L  M     +
Sbjct: 1   CNAGDLHAALELLEEMKSAGFA---PDAFTHTPIITAMANAGDLDGAMDHLRSM---GCD 54

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PNV+TY +LI  F      +EA  L  EM + G  P++VT+N +++  CK   +     +
Sbjct: 55  PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           ++ MI+ G  P+ +T+NSL+DGFC  G +  AR+L   MV+KG R +V +Y+ LI+  CK
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
            QK  +A  +  EM +  + P   TY+ L+ GL +   + +A +++ +M  +   PD   
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +++ I   CK+G +LEA +  Q +R  +    + TYN +I+GLCK+G++  A  +  ++Q
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ 294

Query: 497 HKGPI-PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             G + PDVVT ST+I+ LCK   + +A  LL  M    C P  VT+ T++ G  +  + 
Sbjct: 295 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRL 354

Query: 556 SKVVVLLHKM 565
            +   LL  M
Sbjct: 355 EEAEYLLQGM 364



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 166/322 (51%), Gaps = 11/322 (3%)

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVT----FNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           C   D   A  L  EM   G  PD  T      AM N    DG MD +  +       G 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM-------GC 53

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
           +P+ VTY +L+  F    ++  A +L   M  +GC  ++ +YN+L++A CK   V  A  
Sbjct: 54  DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQD 113

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           + ++M+     P+V+T+N+L+ G  + GN+ DA KL+  M    + P+  T++  IDGLC
Sbjct: 114 VVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 173

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K+   LEA +V + ++         TY+ LI+GLCK  +++ A ++  R+   G  PDVV
Sbjct: 174 KSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 233

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             S++IH  CK G++ +A   L +M  +   P  VT+ T++ G  +  K ++  V+L +M
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQM 293

Query: 566 AAEKLVVSDLSLSSKVVDLLSK 587
                V+ D+   S V++ L K
Sbjct: 294 QESGDVLPDVVTYSTVINGLCK 315



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 4/262 (1%)

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  G +  A EL   M S G   D +++  +I A      ++ A+   R M  +   P+V
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD---PNV 57

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TY  L++   +   L +A+KL+++M+     P+  T+   +D LCK   V  A  V + 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +        + T+N L++G CK G +  A KL   +  KG  P+VVT S +I  LCK  +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
             +A ++L +M+A    P   T+  L+ G  + +K  +   +L +MA       D+ + S
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG-CTPDVVVYS 236

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            ++    K  K  E     + +
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEM 258


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 145/451 (32%), Positives = 248/451 (54%), Gaps = 4/451 (0%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT-SGAFVVLGRILRSCFTPNTVTFNF 156
           D  +S+     ++G  P +   N +++   +     S A  V   +L+S  +PN  T+N 
Sbjct: 151 DKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNI 210

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           LI G C  G +  A R F ++    C PNVVT+NTLI+G C+ R      +L   M  + 
Sbjct: 211 LIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG 270

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
               +P++++YN +I+GLC++G + +   +L +M  R  + + +TYN+LI G+C   ++ 
Sbjct: 271 ---LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFH 327

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  +  EM+ +G+ P V+T+ ++I+  CK G M++    L+ M  RG+ P+  TY +L+
Sbjct: 328 QALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLV 387

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           DGF   G ++ A  +   M+  G    V +YN LIN +C   K+ DA+ +  +M  + + 
Sbjct: 388 DGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLT 447

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P V++Y+T+LSG  +  ++ +AL++  KM    + PD+ T+++ I G C+     EA  +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDL 507

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F  +          TY  LIN  C  G L+ A +L + +  KG +PDVVT S +I+ L K
Sbjct: 508 FDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           + +  +A  LLL +  +  VPS+VT+ TL+ 
Sbjct: 568 QARTREAKRLLLKLFYEESVPSDVTYHTLIE 598



 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 163/538 (30%), Positives = 266/538 (49%), Gaps = 56/538 (10%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           NI+  E V  F  M++ + SP + ++ IL+         D  +  F R+   G  P++  
Sbjct: 185 NISFAENV--FKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVT 242

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            N LI+  CK+      F +L  +      PN +++N +INGLC EGR+ E + +  ++N
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMN 302

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                 + VT+NTLI G C+  N   AL +  EM+        P V+TY S+I  +CK G
Sbjct: 303 KRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG---LSPSVITYTSLIHSMCKAG 359

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +++A E L QM+ R + PN  TY +L+ GF       EA  +  EM+DNG  P VVT+N
Sbjct: 360 NMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYN 419

Query: 299 AMINYNCKDGKM-----------------------------------DKVNRLLELMIQR 323
           A+IN +C  GKM                                   D+  R+   M+ +
Sbjct: 420 ALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAK 479

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PDT+TY+SL+ GFC   R   A +LF  M+  G   D ++Y  LINA C +  ++ A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKA 539

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID- 442
           + L+ EM+ + + P V+TY+ L++GL +     +A +L+ K+   + VP   T+ T I+ 
Sbjct: 540 IQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN 599

Query: 443 --------------GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
                         G C  G + EA QVF+++     +     YN +I+G C+ G ++ A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKA 659

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
             L+  +   G +   VT   ++  L KEG++++ N ++ ++  ++C  SE     +L
Sbjct: 660 YSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANV-LRSCELSEAEQAKVL 716



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 141/460 (30%), Positives = 235/460 (51%), Gaps = 4/460 (0%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR-IMEAARLFKK 176
           V +L++    ++ +   A  ++       F P  +++N +++      R I  A  +FK+
Sbjct: 136 VFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      PNV T+N LI G C   N  VAL+ F+ M  +    C P+VVTYN++IDG CK
Sbjct: 196 MLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKG---CLPNVVTYNTLIDGYCK 252

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              +D   ELL  M  + + PN+I+YN +I G C     KE   +  EM   G   D VT
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I   CK+G   +   +   M++ G++P  +TY SL+   C  G ++RA E    M 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +G   +  +Y  L++   +   + +A  + +EM+     PSV+TYN L++G    G + 
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           DA+ +++ M+   + PD  +++T + G C++  V EA++V + +     +    TY+ LI
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            G C+  R K AC LF  +   G  PD  T + +I+  C EG + KA  L  +M  K  +
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           P  VT+  L+ G  +  +  +   LL K+  E+ V SD++
Sbjct: 553 PDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVT 592



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 195/377 (51%), Gaps = 20/377 (5%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN   ++A+     M++   SP + ++T L+  + K    +       ++   GL P+
Sbjct: 322 KEGNF--HQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPN 379

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 L++   + G  + A+ VL  ++ + F+P+ VT+N LING C  G++++A  + +
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLE 439

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      P+VV+++T+++G CR+ +   AL++  +MV       KPD +TY+S+I G C
Sbjct: 440 DMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMV---AKGIKPDTITYSSLIQGFC 496

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           +     +A +L  +M    + P+  TY +LI  +C   D ++A  L  EM++ GV PDVV
Sbjct: 497 EQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVV 556

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD---------------GFC 340
           T++ +IN   K  +  +  RLL  +      P  VTY++L++               GFC
Sbjct: 557 TYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
           + G ++ A ++F SM+ K  + D  +YN++I+ +C+   +  A  LY+EM+        +
Sbjct: 617 MKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTV 676

Query: 401 TYNTLLSGLFQVGNLGD 417
           T   L+  L + G + +
Sbjct: 677 TVIALVKTLHKEGKVNE 693



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 184/382 (48%), Gaps = 37/382 (9%)

Query: 222 PDVVTYNSIIDGLCKDGF-VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           P V++YN+++D   +    +  A+ +  +M    ++PNV TYN LI GFC   +   A  
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALR 226

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            F  M   G  P+VVT+N +I+  CK  K+D    LL  M  +G+ P+ ++YN +++G C
Sbjct: 227 FFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLC 286

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GR+     +   M  +G   D  +YN LI   CK+     A+ ++ EML   + PSVI
Sbjct: 287 REGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVI 346

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TY +L+  + + GN+  A + +D+M+              + GLC N             
Sbjct: 347 TYTSLIHSMCKAGNMNRATEFLDQMR--------------VRGLCPNE------------ 380

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                     TY  L++G  + G +  A ++   +   G  P VVT + +I+  C  G+M
Sbjct: 381 ---------RTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKM 431

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
             A  +L DM+ K   P  V++ T+L GF ++    + + +  KM A+ +    ++ SS 
Sbjct: 432 VDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSS- 490

Query: 581 VVDLLSKDKKYRECLNQFRHLL 602
           ++    + ++ +E  + F  +L
Sbjct: 491 LIQGFCEQRRTKEACDLFDEML 512



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 171/390 (43%), Gaps = 49/390 (12%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN+  N A  F D M      P   ++T L+   ++    +    + K +  NG  P 
Sbjct: 357 KAGNM--NRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPS 414

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N LIN  C  G    A  VL  +     TP+ V+++ +++G C    + EA R+ +
Sbjct: 415 VVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKR 474

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV------NEF------GAICK-- 221
           K+      P+ +T+++LI G C  R T  A  LF+EM+      +EF       A C   
Sbjct: 475 KMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEG 534

Query: 222 ------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
                             PDVVTY+ +I+GL K     +AK LLL++      P+ +TY+
Sbjct: 535 DLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYH 594

Query: 264 ---------------SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
                          SLI GFC      EA  +F  M++   +PD   +N MI+ +C+ G
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGG 654

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            + K   L + M++ G    TVT  +L+      G+++    +  +++      +     
Sbjct: 655 DIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAK 714

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +L+  N ++  ++  + +  EM  +   P+
Sbjct: 715 VLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 149/452 (32%), Positives = 240/452 (53%), Gaps = 6/452 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            E + F + MI     P + + T L+    ++ +      + + L ++G  PD+   N+L
Sbjct: 124 EEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVL 183

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   CK G    A  VL R+      P+ VT+N ++  LC  G++ EA  +  +     C
Sbjct: 184 IGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQREC 240

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V+T+  LI   C       A+KL +EM  +    CKPDVVTYN +I+G+CK+G +D+
Sbjct: 241 YPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG---CKPDVVTYNVLINGICKEGRLDE 297

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A + L  M      PNVIT+N ++   C    W +A+ L  +M+  G  P VVTFN +IN
Sbjct: 298 AIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILIN 357

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           + C+   + +   +LE M + G  P++++YN L+ GFC   ++ RA E    MVS+GC  
Sbjct: 358 FLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 417

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +YN L+ A CKD K + AV +  ++ S+   P +ITYNT++ GL +VG    A +L+
Sbjct: 418 DIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELL 477

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+   + PD  T++T + GL   G V EA+++F  +     +    TYN ++ GLCK 
Sbjct: 478 EEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 537

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +   A      +  KG  P   T + +I  +
Sbjct: 538 QQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 144/449 (32%), Positives = 232/449 (51%), Gaps = 6/449 (1%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           F  N+ +  L + G        L R++     P+ +    LI G C  G+  +A R+ + 
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           L      P+V+T+N LI G C++     AL++ E M         PDVVTYN+I+  LC 
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS------VAPDVVTYNTILRSLCD 221

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G + +A E+L +   R   P+VITY  LI   C      +A  L  EM   G +PDVVT
Sbjct: 222 SGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT 281

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +IN  CK+G++D+  + L  M   G  P+ +T+N ++   C  GR   A  L   M+
Sbjct: 282 YNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADML 341

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KGC   V ++NILIN  C+ + +  A+ +  +M      P+ ++YN LL G  Q   + 
Sbjct: 342 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMD 401

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A++ ++ M      PD  T+ T +  LCK+G    AV++   + +  C   + TYN +I
Sbjct: 402 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVI 461

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +GL K+G+ + A +L   ++ KG  PD++T ST++  L  EG++D+A  +  DME  +  
Sbjct: 462 DGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIK 521

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           PS VT+  ++ G  +  + S+ +  L  M
Sbjct: 522 PSAVTYNAIMLGLCKAQQTSRAIDFLAYM 550



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 241/465 (51%), Gaps = 6/465 (1%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           I L  L +N + +  +   +R+   G  PD+     LI   C+ G T  A  ++  +  S
Sbjct: 112 IHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENS 171

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
              P+ +T+N LI G C  G I +A ++ ++++V    P+VVT+NT++  LC +     A
Sbjct: 172 GAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKEA 228

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
           +++ +  +      C PDV+TY  +I+  C D  V +A +LL +M+ +   P+V+TYN L
Sbjct: 229 MEVLDRQMQRE---CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVL 285

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G C      EA      M   G QP+V+T N ++   C  G+     RLL  M+++G 
Sbjct: 286 INGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGC 345

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
           +P  VT+N L++  C    + RA ++   M   GC  +  SYN L++  C+++K++ A+ 
Sbjct: 346 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIE 405

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
               M+S    P ++TYNTLL+ L + G    A+++++++      P   T+ T IDGL 
Sbjct: 406 YLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLT 465

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G    A ++ + +R    +  I TY+ L+ GL   G++  A K+FH ++     P  V
Sbjct: 466 KVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAV 525

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           T + ++  LCK  Q  +A D L  M  K C P++ T+  L+ G  
Sbjct: 526 TYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIA 570



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 235/438 (53%), Gaps = 6/438 (1%)

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N  +  L   G + E  +  +++      P+V+   +LI G CR+  T  A ++ E + N
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
             GA+  PDV+TYN +I G CK G +DKA ++L +M   ++ P+V+TYN+++   C    
Sbjct: 171 S-GAV--PDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
            KEA  +    M     PDV+T+  +I   C D  + +  +LL+ M ++G  PD VTYN 
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++G C  GR+  A +   +M   GC+ +V ++NI++ + C   +  DA  L  +ML + 
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
             PSV+T+N L++ L +   LG A+ +++KM  +  +P+S ++   + G C+   +  A+
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           +  + + +  C   I TYN L+  LCK G+   A ++ ++L  KG  P ++T +T+I  L
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
            K G+ + A +LL +M  K   P  +T+ TLLRG     K  + + + H M    +  S 
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSA 524

Query: 575 LSLSSKVVDLLSKDKKYR 592
           ++ ++ ++ L    +  R
Sbjct: 525 VTYNAIMLGLCKAQQTSR 542



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 193/388 (49%), Gaps = 3/388 (0%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
            G   S E       + +M  +P + ++  +L  L  + +    + +  R      +PD+
Sbjct: 185 GGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDV 244

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
               +LI   C       A  +L  + +    P+ VT+N LING+C EGR+ EA +    
Sbjct: 245 ITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNN 304

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           + ++ C PNV+T N ++  +C T   + A +L  +M+ +    C P VVT+N +I+ LC+
Sbjct: 305 MPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG---CSPSVVTFNILINFLCR 361

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              + +A ++L +M      PN ++YN L+ GFC       A      M+  G  PD+VT
Sbjct: 362 KRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 421

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N ++   CKDGK D    +L  +  +G +P  +TYN+++DG   VG+   A EL   M 
Sbjct: 422 YNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMR 481

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KG + D+ +Y+ L+     + KV++A+ ++ +M    I+PS +TYN ++ GL +     
Sbjct: 482 RKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTS 541

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGL 444
            A+  +  M      P   T+   I+G+
Sbjct: 542 RAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 21/206 (10%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ + + M+     P + ++  LLT L K+ + D  V +  +L+S G  P L   N +
Sbjct: 401 DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTV 460

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K+G T  A  +L  + R    P+ +T++ L+ GL  EG++ EA ++F  +   + 
Sbjct: 461 IDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSI 520

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL-------- 234
            P+ VT+N ++ GLC+ + T  A+     MV +    CKP   TY  +I+G+        
Sbjct: 521 KPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG---CKPTKATYTILIEGIADEGLAEE 577

Query: 235 --------CKDGFVDK--AKELLLQM 250
                   C  GFV K  A+++ ++M
Sbjct: 578 ALELLNELCSRGFVKKSSAEQVAVKM 603


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 170/525 (32%), Positives = 271/525 (51%), Gaps = 34/525 (6%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           SGN     A  F+D M+  K  P + +F +++  L    + D+ +S+ + +  +G  P+ 
Sbjct: 188 SGNCHKVAANVFYD-MLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNS 246

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            +   LI+ L K    + A  +L  +      P+  TFN +I GLC   RI EAA++  +
Sbjct: 247 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 306

Query: 177 LNVFACDPNVVTFNTLINGLCRTR--------------------NTLV-----------A 205
           + +    P+ +T+  L+NGLC+                      NTL+           A
Sbjct: 307 MLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDA 366

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
             +  +MV  +G +  PDV TYNS+I G  K G V  A E+L  M+++   PNV +Y  L
Sbjct: 367 KAVLSDMVTSYGIV--PDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTIL 424

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + GFC +    EA  L  EM  +G++P+ V FN +I+  CK+ ++ +   +   M ++G 
Sbjct: 425 VDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 484

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD  T+NSL+ G C V  I  A  L   M+S+G   +  +YN LINA  +  ++++A  
Sbjct: 485 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 544

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L  EM+ +      ITYN+L+ GL + G +  A  L +KM  + +VP S +    I+GLC
Sbjct: 545 LVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLC 604

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           ++G V EAV+  + +        I T+N LINGLC+ GR++    +F +LQ +G  PD V
Sbjct: 605 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 664

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           T +T++ WLCK G +  A  LL +      VP++ T+  LL+  V
Sbjct: 665 TYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLV 709



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 257/495 (51%), Gaps = 10/495 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   S+ ++L +L     +    ++F  + S  + P LF   +++  LC +     A  
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VL  + +    PN+V +  LI+ L    R+ EA +L +++ +  C P+  TFN +I GLC
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292

Query: 198 RTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           +      A K+   M +  F     PD +TY  +++GLCK G VD AK+L  ++      
Sbjct: 293 KFDRINEAAKMVNRMLIRGF----TPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----K 344

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNR 315
           P  + +N+LI GF       +AK +  +M+ + G+ PDV T+N++I    K G +     
Sbjct: 345 PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALE 404

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           +L  M  +G  P+  +Y  L+DGFC +G+I  A  L   M + G + +   +N LI+A C
Sbjct: 405 VLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFC 464

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K+ ++ +AV ++REM  +  +P V T+N+L+SGL +V  +  AL L+  M    VV ++ 
Sbjct: 465 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 524

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+ T I+   + G + EA ++   +      L   TYN LI GLC+ G +  A  LF ++
Sbjct: 525 TYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G +P  ++C+ +I+ LC+ G +++A +   +M  +   P  VTF +L+ G  +  + 
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644

Query: 556 SKVVVLLHKMAAEKL 570
              + +  K+ AE +
Sbjct: 645 EDGLTMFRKLQAEGI 659



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 151/461 (32%), Positives = 240/461 (52%), Gaps = 8/461 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+   + M  M   P   +F  ++  L K  + +    +  R+   G  PD      L
Sbjct: 263 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYL 322

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA-ARLFKKLNVFA 181
           +N LCK+G    A  +  RI +    P +V FN LI+G    GR+ +A A L   +  + 
Sbjct: 323 MNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 378

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V T+N+LI G  +     +AL++  +M N+    CKP+V +Y  ++DG CK G +D
Sbjct: 379 IVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKG---CKPNVYSYTILVDGFCKLGKID 435

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  LL +M    + PN + +N LI  FC      EA  +F EM   G +PDV TFN++I
Sbjct: 436 EAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 495

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C+  ++     LL  MI  GV  +TVTYN+L++ F   G I  AR+L   MV +G  
Sbjct: 496 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSL 555

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YN LI   C+  +V+ A  L+ +ML + + PS I+ N L++GL + G + +A++ 
Sbjct: 556 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEF 615

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
             +M L    PD  TF + I+GLC+ G + + + +F+ ++         TYN L++ LCK
Sbjct: 616 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
            G +  AC L       G +P+  T S ++  L  +  +D+
Sbjct: 676 GGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 246/502 (49%), Gaps = 23/502 (4%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC---KMGI--TSGAFVV 138
           + +L+  L  N ++ T+  L  ++   G+   +F  +L I+ +    K G    +   ++
Sbjct: 108 YQVLIGKLGSNGEFKTIDRLLMQMKDEGI---VFKESLFISIMRDYDKAGFPGQTTRLML 164

Query: 139 LGRILRSC---FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             R + SC   F    V    L++G C +     AA +F  +      P + TF  ++  
Sbjct: 165 EMRNVYSCEPTFKSYNVVLEILVSGNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKA 220

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           LC       AL +  +M       C P+ V Y ++I  L K   V++A +LL +M     
Sbjct: 221 LCAVNEVDSALSVLRDMTKHG---CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 277

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P+  T+N +I G C  D   EA  +   M+  G  PD +T+  ++N  CK G++D    
Sbjct: 278 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKD 337

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGCRHDVYSYNILINAN 374
           L      R   P +V +N+L+ GF   GR+  A+ +   MV S G   DV +YN LI   
Sbjct: 338 LF----YRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 393

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K   V  A+ + R+M ++  +P+V +Y  L+ G  ++G + +A  L+++M  + + P++
Sbjct: 394 WKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNT 453

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             F   I   CK   + EAV++F+ +    C+  + T+N LI+GLC++  +K A  L   
Sbjct: 454 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 513

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  +G + + VT +T+I+   + G++ +A  L+ +M  +  +  E+T+ +L++G  +  +
Sbjct: 514 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGE 573

Query: 555 KSKVVVLLHKMAAEKLVVSDLS 576
             K   L  KM  + LV S +S
Sbjct: 574 VDKARSLFEKMLRDGLVPSSIS 595



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 217/451 (48%), Gaps = 17/451 (3%)

Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL----VALKLF 209
           +  LI  L + G      RL  ++     D  +V   +L   + R  +         +L 
Sbjct: 108 YQVLIGKLGSNGEFKTIDRLLMQMK----DEGIVFKESLFISIMRDYDKAGFPGQTTRLM 163

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            EM N +   C+P   +YN +++ L        A  +   M  R I P + T+  ++   
Sbjct: 164 LEMRNVYS--CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAL 221

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C V++   A  +  +M  +G  P+ V +  +I+   K  ++++  +LLE M   G  PD 
Sbjct: 222 CAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 281

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            T+N ++ G C   RI+ A ++   M+ +G   D  +Y  L+N  CK  +V+ A    ++
Sbjct: 282 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAA----KD 337

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN-DVVPDSFTFATYIDGLCKNG 448
           +     +P+ + +NTL+ G    G L DA  ++  M  +  +VPD  T+ + I G  K G
Sbjct: 338 LFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKG 397

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            V  A++V + +RN  C+  + +Y  L++G CK+G++  A  L + +   G  P+ V  +
Sbjct: 398 LVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFN 457

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +I   CKE ++ +A ++  +M  K C P   TF +L+ G  + ++    + LL  M +E
Sbjct: 458 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 517

Query: 569 KLVVSDLSLSSKVVDLLSKD--KKYRECLNQ 597
            +V + ++ ++ +   L +   K+ R+ +N+
Sbjct: 518 GVVANTVTYNTLINAFLRRGEIKEARKLVNE 548


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 162/517 (31%), Positives = 272/517 (52%), Gaps = 8/517 (1%)

Query: 33  KTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLA 92
           +T + S  FK+   + K LN   ++G    NE++YF +CM+    +P +   T L+    
Sbjct: 59  QTHVLSFDFKE-VHLMKLLNRSCRAGKY--NESLYFLECMVDKGYTPDVILCTKLIKGFF 115

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
            ++       + + L   G  PD+F  N LI+   K      A  VL R+    F P+ V
Sbjct: 116 NSRNIGKATRVMEILERYGK-PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVV 174

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T+N +I   C+ G++  A  +F++L    C+P V+T+  LI          VA+KL +EM
Sbjct: 175 TYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEM 234

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           +++     +PD +TYN+II G+CK+  VDKA ELL  +  R   P++ITYN L+      
Sbjct: 235 LSKG---LEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSR 291

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
             W E + L  EM+  G +P+VVT + +I   C+DGK+++   LL  M ++G+ PD   Y
Sbjct: 292 GKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCY 351

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           + L+ GFC  GR+  A E    M+S GC  D+ +YN ++   C+  K + A+ ++ ++  
Sbjct: 352 DPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDE 411

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
               P+V +YNTL S L+  G+   AL++I K+    + PD  T+ + I  LC++G V E
Sbjct: 412 VGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDE 471

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A+++   +++ +    + +YN ++ GLCK+ R   A ++   +  KG  P+  T   +I 
Sbjct: 472 AIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIE 531

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +   G   +A +L   +   N + SE +F  L + F
Sbjct: 532 GIGFSGLRAEAMELANSLHGMNAI-SEDSFNRLNKTF 567



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 235/447 (52%), Gaps = 4/447 (0%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N  C+ G  + +   L  ++   +TP+ +    LI G      I +A R+ + L  + 
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V  +N LI+G  +      A ++ + M +  G +  PDVVTYN +I   C  G +D
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSR-GFL--PDVVTYNIMIGSFCSRGKLD 190

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A E+  ++   N  P VITY  LI           A  L  EM+  G++PD +T+NA+I
Sbjct: 191 LALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAII 250

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              CK+  +DK   LL  +  RG  PD +TYN L+      G+ S   +L   M+S GC+
Sbjct: 251 RGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCK 310

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +V +++ILI   C+D KVE+AV L R M  + ++P    Y+ L++G  + G L  A + 
Sbjct: 311 PNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEF 370

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ++ M  +  +PD   + T + GLC+ G   +A++VF+ +    C   + +YN L + L  
Sbjct: 371 LEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWS 430

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G    A ++  +L ++G  PD +T +++I  LC++G +D+A +LL+DM++    P+ V+
Sbjct: 431 SGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVS 490

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +  +L G  + N+ +  + +L  M  +
Sbjct: 491 YNIILLGLCKVNRANDAIEVLAAMTEK 517


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 170/571 (29%), Positives = 288/571 (50%), Gaps = 37/571 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G++  N+A   F  M++    P   +++ ++  L K +  D   +  +++ + G+ P+
Sbjct: 231 KEGDV--NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +  N LI      G    A  V   + R    P+ VTFN L+  LC  G+I EA  +F 
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALK-LFEEMVNEFGA--IC------------ 220
            + +   +P+V ++N ++NG   T+  LV +  LF+ M+ +  A  IC            
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYA-TKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 407

Query: 221 ------------------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
                             KP+V+TY ++I  LC+ G +D A E   QM D+ + P+   Y
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + LI GFC      +AK L  E+M+NG+  D+V F+++IN  CK G++     + +L + 
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G++P  V Y+ LMDG+CLVG++ +A  +F +MVS G   +   Y  L+N  CK  ++++
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
            + L+REML + I+PS I YN ++ GLF+ G    A     +M  + +  +  T++  + 
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 647

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GL KN    EA+ +F+ +R    ++ I T N +I G+ +  R++ A  LF  +   G +P
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 707

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
            VVT S MI  L KEG +++A D+   M+   C P       ++R  ++ N+  +    L
Sbjct: 708 CVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYL 767

Query: 563 HKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            K+      +  L+ +  +VDL S     RE
Sbjct: 768 SKIDERNFSLEHLT-TMLLVDLFSSKGTCRE 797



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/491 (29%), Positives = 259/491 (52%), Gaps = 6/491 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           SP   ++ IL+    +  + +  ++ F +L   GL  D+ + N L+   C+   T  A  
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 167

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           ++L R       P+  +++ L+  LC +G+  +A  L + +      C P+VV +NT+I+
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVID 227

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +   A  LF+EMV        PD VTY+S++  LCK   +DKA+  L QM ++ 
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRG---IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TYN+LI G+     WKEA  +F EM    + PDVVTFN ++   CK GK+ +  
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + M  +G NPD  +YN +++G+   G +    +LF  M+  G    + ++N+LI A 
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
                ++ A+ ++ EM    ++P+V+TY T+++ L ++G + DA++  ++M    V PD 
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           + +   I G C +G +L+A ++   I N    L I  ++ +IN LCK+GR+  A  +F  
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDL 524

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             + G  P  V  S ++   C  G+M+KA  +   M +    P++V + TL+ G+ +  +
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGR 584

Query: 555 KSKVVVLLHKM 565
             + + L  +M
Sbjct: 585 IDEGLSLFREM 595



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 182/397 (45%), Gaps = 3/397 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F+ M      P + ++T ++  L +  + D  +  F ++   G+ PD +  + L
Sbjct: 411 DKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C  G    A  ++  I+ +    + V F+ +IN LC  GR+M+A  +F        
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P  V ++ L++G C       AL++F+ MV+   A  +P+ V Y ++++G CK G +D+
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS---AGIEPNDVVYGTLVNGYCKIGRIDE 587

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              L  +M  + I P+ I YN +I G         AK  F EM ++G+  +  T++ ++ 
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 647

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+   D+   L + +    V  D +T N+++ G     R+  A++LF S+   G   
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 707

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V +Y+I+I    K+  VE+A  ++  M +    P     N ++  L +   +  A   +
Sbjct: 708 CVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYL 767

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            K+   +   +  T    +D     G   E ++   A
Sbjct: 768 SKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPA 804



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 4/237 (1%)

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK-LID 423
           ++Y IL++   +  + E A+  + ++L   +R  +I  N LL G  +     +AL  L+ 
Sbjct: 112 HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLH 171

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ--AIRNCKCELRIETYNCLINGLCK 481
           +      VPD F+++  +  LC  G   +A  + +  A     C   +  YN +I+G  K
Sbjct: 172 RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFK 231

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G +  AC LF  +  +G  PD VT S+++H LCK   MDKA   L  M  K  +P+  T
Sbjct: 232 EGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT 291

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           +  L+ G+    +  + V +  +M  +  ++ D+   + ++  L K  K +E  + F
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRQS-ILPDVVTFNMLMGSLCKYGKIKEARDVF 347


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 156/486 (32%), Positives = 254/486 (52%), Gaps = 5/486 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E+VY  + M      P + +   L+  L +  Q  T V + + ++S+G+ PD      L+
Sbjct: 182 ESVY--NEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLM 239

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
               + G    A  V  +++ +  +P  VT N LING C  GR+ +A    ++      +
Sbjct: 240 QGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFE 299

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+NT ++GLC+  +   ALK+ + M+ E      PDV TYN++I+ L K+G +D+A
Sbjct: 300 PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEG---HDPDVFTYNTVINCLSKNGELDEA 356

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K ++ QM DR   P+  T+N+LI      +  +EA  L  E+   G+ PDV TFN +IN 
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINA 416

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G      RL E M   G  PD VTYN L+D  C +G++  A +L   M S GC   
Sbjct: 417 LCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRS 476

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN +I+A CK  ++E+A  ++ +M ++ I  S +T+NTL+ GL +   + DA +LI+
Sbjct: 477 TVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIE 536

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M    + P++ T+ + +   CK G + +A  + + +     E+ + TY  LINGLCK G
Sbjct: 537 QMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAG 596

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R + A KL   ++ KG  P     + +I  L +   +  A +L  +M      P  +T+ 
Sbjct: 597 RTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYK 656

Query: 544 TLLRGF 549
            + R  
Sbjct: 657 IVFRSL 662



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 245/487 (50%), Gaps = 4/487 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV   + M     +P  T+FT L+    +    +  + +  ++   G  P    +N+LIN
Sbjct: 216 AVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLIN 275

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CKMG    A   + + +   F P+ VT+N  ++GLC  G +  A ++   +     DP
Sbjct: 276 GYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDP 335

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T+NT+IN L +      A  +  +MV+     C PD  T+N++I  L     +++A 
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRG---CLPDTTTFNTLIVALSSQNRLEEAL 392

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  ++  + ++P+V T+N LI   C V D      LF EM  +G  PD VT+N +I++ 
Sbjct: 393 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHL 452

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  GK+     LL  M   G    TVTYN+++D  C   RI  A E+F  M ++G     
Sbjct: 453 CSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSA 512

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            ++N LI+  CK ++++DA  L  +M+ E ++P+ ITYN++L+   + GN+  A  +++ 
Sbjct: 513 VTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILET 572

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  N    D  T+ T I+GLCK G    A+++ + +R        + YN +I  L +   
Sbjct: 573 MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNN 632

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK-EGQMDKANDLLLDMEAKNCVPSEVTFC 543
           L+ A  LF  +   G  PD +T   +   LC+  G + +A D L++M  K  +P   +F 
Sbjct: 633 LRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFR 692

Query: 544 TLLRGFV 550
            L  G +
Sbjct: 693 MLAEGLL 699



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 225/442 (50%), Gaps = 8/442 (1%)

Query: 44  GTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL 103
           G ++   +N   K G +   +A+ +    I     P   ++   +  L +N      + +
Sbjct: 267 GVTVNVLINGYCKMGRV--EDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKV 324

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLC 162
              +   G  PD+F  N +INCL K G    A  ++ +++ R C  P+T TFN LI  L 
Sbjct: 325 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCL-PDTTTFNTLIVALS 383

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
           ++ R+ EA  L ++L V    P+V TFN LIN LC+  +  + ++LFEEM +   + C P
Sbjct: 384 SQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS---SGCTP 440

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D VTYN +ID LC  G +  A +LL +M+      + +TYN++I   C     +EA+ +F
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M   G+    VTFN +I+  CK  ++D    L+E M++ G+ P+ +TYNS++  +C  
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQ 560

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G I +A ++  +M + G   DV +Y  LIN  CK  + + A+ L R M  + IRP+   Y
Sbjct: 561 GNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 620

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF-VLEAVQVFQAIR 461
           N ++  LF+  NL DAL L  +M      PD+ T+      LC+ G  + EA      + 
Sbjct: 621 NPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMV 680

Query: 462 NCKCELRIETYNCLINGLCKMG 483
           N        ++  L  GL  +G
Sbjct: 681 NKGFMPEFSSFRMLAEGLLNLG 702



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 248/493 (50%), Gaps = 6/493 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           +P    +  ++  L     +D +  L + +   G      V+   +    ++     A  
Sbjct: 86  APSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVD 145

Query: 137 VVLGRILRSCF--TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           +VL ++    F    +TV FN L+N L    ++     ++ ++      P+VVT NTLI 
Sbjct: 146 LVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIK 205

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
            LCR      A+ + EEM +   A   PD  T+ +++ G  ++G ++ A  +  +M +  
Sbjct: 206 ALCRAHQVRTAVLMLEEMSSHGVA---PDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG 262

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
            +P  +T N LI G+C +   ++A     + + +G +PD VT+N  ++  C++G +    
Sbjct: 263 CSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHAL 322

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           ++++LM+Q G +PD  TYN++++     G +  A+ +   MV +GC  D  ++N LI A 
Sbjct: 323 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 382

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
               ++E+A+ L RE+  + + P V T+N L++ L +VG+    ++L ++M+ +   PD 
Sbjct: 383 SSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDE 442

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   ID LC  G +  A+ +   + +  C     TYN +I+ LCK  R++ A ++F +
Sbjct: 443 VTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQ 502

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  +G     VT +T+I  LCK  ++D A +L+  M  +   P+ +T+ ++L  + +   
Sbjct: 503 MDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGN 562

Query: 555 KSKVVVLLHKMAA 567
             K   +L  M A
Sbjct: 563 IKKAADILETMTA 575



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 210/403 (52%), Gaps = 5/403 (1%)

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF-GAICKPDVVTYNSIIDGLCK 236
           + F    + V FN L+N L         LKL E + NE  G   +PDVVT N++I  LC+
Sbjct: 154 DTFGVQADTVVFNHLLNVLVEGSK----LKLLESVYNEMTGRGIQPDVVTLNTLIKALCR 209

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              V  A  +L +M    + P+  T+ +L+ GF      + A  +  +MM+ G  P  VT
Sbjct: 210 AHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVT 269

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
            N +IN  CK G+++     ++  I  G  PD VTYN+ + G C  G +S A ++   M+
Sbjct: 270 VNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLML 329

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +G   DV++YN +IN   K+ ++++A  +  +M+     P   T+NTL+  L     L 
Sbjct: 330 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLE 389

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +AL L  ++ +  + PD +TF   I+ LCK G     +++F+ +++  C     TYN LI
Sbjct: 390 EALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILI 449

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           + LC MG+L  A  L + ++  G     VT +T+I  LCK+ ++++A ++   M+A+   
Sbjct: 450 DHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGIS 509

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            S VTF TL+ G  +  +      L+ +M  E L  ++++ +S
Sbjct: 510 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS 552



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 199/424 (46%), Gaps = 13/424 (3%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF---GAICKPDVVTYNSIIDGLCKDGFV 240
           P+   +  ++  L     T  A  L E +V E    G   +  VV   S ++   +    
Sbjct: 87  PSSAVYEEIVQKL----GTAGAFDLMEGLVREMRREGHQVRAVVV--RSFVESYARLRRF 140

Query: 241 DKAKELLLQMKDRN---INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           D A +L+L   D +   +  + + +N L+         K  + ++ EM   G+QPDVVT 
Sbjct: 141 DDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTL 200

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +I   C+  ++     +LE M   GV PD  T+ +LM GF   G I  A  +   M+ 
Sbjct: 201 NTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMME 260

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            GC     + N+LIN  CK  +VEDA+   ++ +++   P  +TYNT + GL Q G++  
Sbjct: 261 AGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSH 320

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           ALK++D M      PD FT+ T I+ L KNG + EA  +   + +  C     T+N LI 
Sbjct: 321 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 380

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
            L    RL+ A  L   L  KG  PDV T + +I+ LCK G       L  +M++  C P
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
            EVT+  L+       K    + LL++M +     S ++ ++ ++D L K  +  E    
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNT-IIDALCKKMRIEEAEEV 499

Query: 598 FRHL 601
           F  +
Sbjct: 500 FDQM 503


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 166/479 (34%), Positives = 257/479 (53%), Gaps = 8/479 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    +  L+  L+K  + + V+ L + +   G  PD+   N  I+ LCKM     A  +
Sbjct: 268 PNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL 327

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING-LC 197
           + R+L   FTPN+ T+  L++GLC  G++ EA  L  K+     +PNVV FNTLING + 
Sbjct: 328 VDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVS 383

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R R       + E M++     C PD+ TYN++I GLCK G++  A+EL+ +M+ +   P
Sbjct: 384 RGRLDEAKAVMHESMLS---VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 440

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NVITY  LI  FC     +EA+ +  EM   G+  + V +N +I+  CKD K+     + 
Sbjct: 441 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 500

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M  +G  PD  T+NSL+ G C V +   A  L+  M+ +G   +  +YN LI+A  + 
Sbjct: 501 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 560

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             +++A+ L  +ML        ITYN L+  L + GN+   L L + M    + P++ + 
Sbjct: 561 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 620

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I+GLC+ G +  A++  + + +      I TYN LINGLCK GR + A  LF +LQ 
Sbjct: 621 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 680

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
           +G  PD +T +T+I W CKEG  D A+ LL        +P+EVT+  L+  F++   + 
Sbjct: 681 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 258/495 (52%), Gaps = 10/495 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   S+ ++L +L        V ++F  + S G+ P ++   +++  LC +     A  
Sbjct: 197 EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACA 256

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  + R    PN + +  LI+ L   GR+ E  +L +++ +  C P+V TFN  I+GLC
Sbjct: 257 LLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC 316

Query: 198 RTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           +      A KL + M+   F     P+  TY  ++ GLC+ G VD+A+ LL    ++  N
Sbjct: 317 KMLRIHEAAKLVDRMLLRGF----TPNSFTYGVLMHGLCRMGKVDEARMLL----NKVPN 368

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIE-MMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           PNV+ +N+LI G+       EAK +  E M+  G  PD+ T+N +I   CK G +     
Sbjct: 369 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 428

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L+  M  +G  P+ +TY  L+D FC  GR+  AR +   M  KG   +   YN LI+A C
Sbjct: 429 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALC 488

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           KD+KV+DA+ ++ +M S+  +P + T+N+L+ GL +V    +AL L   M L  V+ ++ 
Sbjct: 489 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 548

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+ T I    + G + EA+++   +    C L   TYN LI  LC+ G ++    LF  +
Sbjct: 549 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 608

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             KG  P+ ++C+ +I+ LC+ G +  A + L DM  +   P  VT+ +L+ G  +  + 
Sbjct: 609 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 668

Query: 556 SKVVVLLHKMAAEKL 570
            + + L  K+  E +
Sbjct: 669 QEALNLFDKLQVEGI 683



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 205/392 (52%), Gaps = 8/392 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    D M+    +P   ++ +L+  L +  + D    L  ++ +    P++ + N L
Sbjct: 322 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTL 377

Query: 123 INCLCKMGITSGAFVVLGRILRSCF-TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           IN     G    A  V+   + S    P+  T+N LI GLC +G ++ A  L  ++ +  
Sbjct: 378 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 437

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C+PNV+T+  LI+  C+      A  + +EM  +  A+   + V YN +I  LCKD  V 
Sbjct: 438 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL---NAVGYNCLISALCKDEKVQ 494

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  +   M  +   P++ T+NSLI G C V+ ++EA  L+ +M+  GV  + +T+N +I
Sbjct: 495 DALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLI 554

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   + G M +  +L+  M+ RG   D +TYN L+   C  G I +   LF  M+SKG  
Sbjct: 555 HAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN 614

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  S NILIN  C+   ++ A+   R+M+   + P ++TYN+L++GL + G   +AL L
Sbjct: 615 PNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNL 674

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            DK+Q+  + PD+ T+ T I   CK G   +A
Sbjct: 675 FDKLQVEGICPDAITYNTLISWHCKEGMFDDA 706



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 190/373 (50%), Gaps = 4/373 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVS-LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
           P+P +  F  L+       + D   + + + + S G  PD+F  N LI  LCK G    A
Sbjct: 367 PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 426

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             ++  +      PN +T+  LI+  C EGR+ EA  +  +++      N V +N LI+ 
Sbjct: 427 RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISA 486

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           LC+      AL +F +M ++    CKPD+ T+NS+I GLCK    ++A  L   M    +
Sbjct: 487 LCKDEKVQDALNMFGDMSSKG---CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 543

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
             N ITYN+LI  F      +EA  L  +M+  G   D +T+N +I   C+ G ++K   
Sbjct: 544 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 603

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L E M+ +G+NP+ ++ N L++G C  G I  A E    M+ +G   D+ +YN LIN  C
Sbjct: 604 LFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC 663

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K  + ++A+ L+ ++  E I P  ITYNTL+S   + G   DA  L+ +   +  +P+  
Sbjct: 664 KTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEV 723

Query: 436 TFATYIDGLCKNG 448
           T+   +    K G
Sbjct: 724 TWYILVSNFIKEG 736



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 206/410 (50%), Gaps = 9/410 (2%)

Query: 169 EAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
           +A RL   +  V++C+P   ++N +++ L       V   +F EM+++      P V T+
Sbjct: 182 QATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKG---ISPTVYTF 238

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
             ++  LC    VD A  LL  M      PN I Y +LI     V    E   L  EM+ 
Sbjct: 239 GVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLL 298

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G  PDV TFN  I+  CK  ++ +  +L++ M+ RG  P++ TY  LM G C +G++  
Sbjct: 299 MGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDE 358

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA-VCLYREMLSERIRPSVITYNTLL 406
           AR L    ++K    +V  +N LIN      ++++A   ++  MLS    P + TYNTL+
Sbjct: 359 ARML----LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLI 414

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL + G L  A +L+++MQ+    P+  T+   ID  CK G + EA  V   +      
Sbjct: 415 LGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLA 474

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           L    YNCLI+ LCK  +++ A  +F  +  KG  PD+ T +++I  LCK  + ++A  L
Sbjct: 475 LNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGL 534

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
             DM  +  + + +T+ TL+  F++     + + L++ M      + D++
Sbjct: 535 YQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 584



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 241/496 (48%), Gaps = 11/496 (2%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL--GR 141
           + +L+  L    ++ T  +L  ++   G+     +  L++    + G+   A  +L   R
Sbjct: 132 YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMR 191

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
            + SC  P   ++N +++ L A         +F ++      P V TF  ++  LC    
Sbjct: 192 GVYSC-EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 250

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A  L ++M       C P+ + Y ++I  L K G V++  +LL +M      P+V T
Sbjct: 251 VDSACALLKDMTRHG---CVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNT 307

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +N  I G C +    EA  L   M+  G  P+  T+  +++  C+ GK+D+   LL    
Sbjct: 308 FNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL---- 363

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARE-LFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            +  NP+ V +N+L++G+   GR+  A+  +  SM+S GC  D+++YN LI   CK   +
Sbjct: 364 NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYL 423

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
             A  L  EM  +   P+VITY  L+    + G L +A  ++D+M    +  ++  +   
Sbjct: 424 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCL 483

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I  LCK+  V +A+ +F  + +  C+  I T+N LI GLCK+ + + A  L+  +  +G 
Sbjct: 484 ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 543

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           I + +T +T+IH   + G M +A  L+ DM  + C   ++T+  L++   +     K + 
Sbjct: 544 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 603

Query: 561 LLHKMAAEKLVVSDLS 576
           L   M ++ L  +++S
Sbjct: 604 LFEDMMSKGLNPNNIS 619



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 181/365 (49%), Gaps = 4/365 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N     G +   +AV   + M+ +   P + ++  L+  L K     +   L   +  
Sbjct: 377 LINGYVSRGRLDEAKAV-MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 435

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G  P++    +LI+  CK G    A  VL  +       N V +N LI+ LC + ++ +
Sbjct: 436 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQD 495

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  +F  ++   C P++ TFN+LI GLC+      AL L+++M+ E G I   + +TYN+
Sbjct: 496 ALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE-GVIA--NTITYNT 552

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I    + G + +A +L+  M  R    + ITYN LI   C   + ++   LF +MM  G
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           + P+ ++ N +IN  C+ G +      L  MI RG+ PD VTYNSL++G C  GR   A 
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            LF  +  +G   D  +YN LI+ +CK+   +DA  L    +     P+ +T+  L+S  
Sbjct: 673 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 732

Query: 410 FQVGN 414
            + G+
Sbjct: 733 IKEGD 737



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 184/370 (49%), Gaps = 7/370 (1%)

Query: 236 KDGFVDKAKELLLQMKD-RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           + G   +A  LLL M+   +  P   +YN ++      +  K    +F EM+  G+ P V
Sbjct: 176 RAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTV 235

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            TF  ++   C   ++D    LL+ M + G  P+ + Y +L+     VGR++   +L   
Sbjct: 236 YTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEE 295

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M+  GC  DV ++N  I+  CK  ++ +A  L   ML     P+  TY  L+ GL ++G 
Sbjct: 296 MLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK 355

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCELRIETYN 473
           + +A  L++K+      P+   F T I+G    G + EA  V  +++ +  C   I TYN
Sbjct: 356 VDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYN 411

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI GLCK G L +A +L + +Q KG  P+V+T + +I   CKEG++++A ++L +M  K
Sbjct: 412 TLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK 471

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
               + V +  L+    ++ K    + +   M++ K    D+   + ++  L K  K+ E
Sbjct: 472 GLALNAVGYNCLISALCKDEKVQDALNMFGDMSS-KGCKPDIFTFNSLIFGLCKVNKFEE 530

Query: 594 CLNQFRHLLF 603
            L  ++ +L 
Sbjct: 531 ALGLYQDMLL 540



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 3/249 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M      P + +F  L+  L K  +++  + L++ +   G+  +    N L
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   + G    A  ++  +L      + +T+N LI  LC  G I +   LF+ +     
Sbjct: 554 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 613

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +PN ++ N LINGLCRT N   AL+   +M++       PD+VTYNS+I+GLCK G   +
Sbjct: 614 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRG---LTPDIVTYNSLINGLCKTGRAQE 670

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +++   I P+ ITYN+LI   C    + +A  L    +D+G  P+ VT+  +++
Sbjct: 671 ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 730

Query: 303 YNCKDGKMD 311
              K+G  +
Sbjct: 731 NFIKEGDQE 739


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 167/537 (31%), Positives = 274/537 (51%), Gaps = 33/537 (6%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +L+ + AK    +  + +F ++ +NGL PD+   N ++  L    + +    V   +++ 
Sbjct: 142 LLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKC 201

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL--------- 196
              P  VTFN +++  C EG +  A  +   + +F CDPN V++N L+NGL         
Sbjct: 202 QIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRA 261

Query: 197 ---------------CRTRNTLVALKLFEEMVNE--------FGAICKPDVVTYNSIIDG 233
                            T N L+     +EM  E         G    P VVTYN+I+  
Sbjct: 262 KELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYS 321

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LC+ G V  A+  L  M + ++ P++++YN+LI G+  + ++ EA  LF E+    + P 
Sbjct: 322 LCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPS 381

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VVT+N +I+  C+ G +D    + + MI+ G+ PD VT+  L+ GFC +G +  A+ELF 
Sbjct: 382 VVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFD 441

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+S+G + D  +Y   I    K      A  +  EM +E   P +ITYN L++GL ++G
Sbjct: 442 EMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLG 501

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           N  DA +L+ KM+L  +VPD  T+ + I     +G + +A +VF  +        + TY 
Sbjct: 502 NFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYT 561

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI+     GRL  A K F  +Q KG  P+V+T + +I+ LCKE  MD A +L  +ME+K
Sbjct: 562 VLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESK 621

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
              P++ T+ T+L     N +  +  + L+K   ++ +  D    S ++  LSKD K
Sbjct: 622 GVSPNKYTY-TILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYK 677



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 160/539 (29%), Positives = 267/539 (49%), Gaps = 24/539 (4%)

Query: 31  NPKTDLSSH-HFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS--PGMTSFTIL 87
           NP+ D S + HF    +  +FL     S       A+ FF  + K +P+     T+F  +
Sbjct: 33  NPQIDNSVNPHFHSAVTQPEFLLRVLNSVKHRPLTALRFFRWVEK-QPNFHRSETAFVAI 91

Query: 88  LTMLAKN---KQYDTVVSLFKRLNSNGLFPDLFV--------------LNLLINCLCKMG 130
           L +LAKN   K    V+     +  +G   D+ V              L+LLI    K  
Sbjct: 92  LDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQVFAKKL 151

Query: 131 ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
           I     +V  +++ +   P+    N ++  L  +  + E   ++  +      P +VTFN
Sbjct: 152 ILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFN 211

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           T+++  C+      A+++ + M   FG  C P+ V+YN +++GL   G  D+AKEL+ QM
Sbjct: 212 TMMDSRCKEGEVGRAVEVLDVM-RMFG--CDPNDVSYNVLVNGLSGKGEFDRAKELIEQM 268

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
               +  +  TYN LI GFC  + ++EA  L  EM+  G  P VVT+N ++   C+ G++
Sbjct: 269 SMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRV 328

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
               R L++M+   + PD V+YN+L+ G+  +G  + A  LF  + SK     V +YN L
Sbjct: 329 SDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTL 388

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+  C+   ++ A  +  +M+   + P V+T+  L+ G  Q+GNL  A +L D+M    +
Sbjct: 389 IDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGL 448

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD   + T I G  K G   +A  + + ++       + TYN LINGLCK+G    A +
Sbjct: 449 KPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANE 508

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           L  +++ +G +PD VT +++IH     G + KA ++  DM  K   PS VT+  L+  +
Sbjct: 509 LVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSY 567



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 211/409 (51%), Gaps = 3/409 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++  L+    K + ++    L + +   G  P +   N ++  LC++G  S A   L  +
Sbjct: 279 TYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVM 338

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +     P+ V++N LI G    G   EA  LF +L      P+VVT+NTLI+G CRT N 
Sbjct: 339 VNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNL 398

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            +A  + ++M+     +C PDVVT+  ++ G C+ G +  AKEL  +M  R + P+ I Y
Sbjct: 399 DIAKGMKDDMIKH--GLC-PDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAY 455

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            + I G   + +  +A  +  EM   G  PD++T+N +IN  CK G  D  N L++ M  
Sbjct: 456 TTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRL 515

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G+ PD VTY S++    + G + +A E+F  M+ KG    V +Y +LI++     +++ 
Sbjct: 516 EGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDF 575

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A   + EM  + + P+VITYN L+ GL +   +  A  L  +M+   V P+ +T+   I+
Sbjct: 576 AKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
                 +  +A+++++ + + + +    T++ L+  L K  +L    +L
Sbjct: 636 ENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 197/398 (49%), Gaps = 6/398 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  + D M+     P + S+  L+   ++   +   + LF  L S  L P +   N L
Sbjct: 329 SDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTL 388

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C+ G    A  +   +++    P+ VTF  L+ G C  G +  A  LF ++     
Sbjct: 389 IDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGL 448

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ + + T I G  +  N   A  + EEM  E      PD++TYN +I+GLCK G  D 
Sbjct: 449 KPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEG---FPPDLITYNVLINGLCKLGNFDD 505

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL+ +M+   I P+ +TY S+I         ++A+ +F +M+  G+ P VVT+  +I+
Sbjct: 506 ANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIH 565

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                G++D   +  + M  +GV+P+ +TYN+L+ G C    +  A  LF  M SKG   
Sbjct: 566 SYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSP 625

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           + Y+Y ILIN N   Q  +DA+ LY++ML   I+P   T++ L+  L +   L   L+L 
Sbjct: 626 NKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL- 684

Query: 423 DKMQLNDVVPDSFTFATYIDGL--CKNGFVLEAVQVFQ 458
           + + L  V  +S   A     L   KN     A+ VF+
Sbjct: 685 ENLPLAIVEINSTWIAEGFVKLEESKNNSHFRAIHVFE 722



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 1/234 (0%)

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           ++LI    K   +E  + ++ +M++  + P V   N +L  L     + +  ++   M  
Sbjct: 141 DLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIK 200

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + P   TF T +D  CK G V  AV+V   +R   C+    +YN L+NGL   G    
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDR 260

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A +L  ++   G      T + +I   CK+   ++ANDL  +M  +  +P+ VT+ T++ 
Sbjct: 261 AKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMY 320

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              +  + S     L  M  E L + DL   + ++   S+   + E L  F  L
Sbjct: 321 SLCRLGRVSDARRYLDVMVNEDL-MPDLVSYNTLIYGYSRLGNFAEALLLFSEL 373


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 169/559 (30%), Positives = 269/559 (48%), Gaps = 40/559 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++   +  L +    D  + + K +   GL PD     LL++  CK   +  A ++
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +  S   PN  T+  LI+G   EG I EA R+  ++       NVVT+N +I G+ +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+ LF EM+    A  +PD  TYN +IDG  K   + KA ELL +MK R + P+
Sbjct: 394 AGEMAKAMSLFNEMLM---AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPS 450

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             TY+ LI G C   D ++A  +  +M+ NGV+P+V  +  +I    ++ + +    LL+
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           +MI  GV PD   YN L+ G C   ++  A+ L V M  KG + + ++Y   IN   K  
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG 570

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK----LIDKMQLND----- 429
           +++ A   +++MLS  I P+ + Y  L+ G   VGN  +AL     +++K  + D     
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630

Query: 430 --------------------------VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
                                     VVPD F + + I G CK G + +A Q++  + + 
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                I  YN LINGLCK+G +  A +LF  ++ K  +PDVVT ST+I   CK G + +A
Sbjct: 691 GINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEA 750

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             L  +M +K   P    +C L+ G  +     K + L H+  A++  V  LS  + ++D
Sbjct: 751 FKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE--AQQKSVGSLSAFNSLID 808

Query: 584 LLSKDKKYRECLNQFRHLL 602
              K  K  E    F  ++
Sbjct: 809 SFCKHGKVIEARELFDDMV 827



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 165/570 (28%), Positives = 282/570 (49%), Gaps = 43/570 (7%)

Query: 32  PKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTML 91
           P + L+ + F     I  F+    K GNI   EA+   D MI       + ++  ++  +
Sbjct: 338 PSSGLNPNRFTYTALIDGFI----KEGNI--EEALRIKDEMITRGLKLNVVTYNAMIGGI 391

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
           AK  +    +SLF  +   GL PD +  NLLI+   K    + A  +L  +     TP+ 
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            T++ LI+GLC    + +A  +  ++      PNV  + TLI    +     +A++L + 
Sbjct: 452 FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M+   G +  PD+  YN +I GLC+   V++AK LL+ M ++ I PN  TY + I  +  
Sbjct: 512 MIAN-GVL--PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
             + + A+  F +M+ +G+ P+ V +  +I  +C  G   +     + M+++G+ PD   
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y++++      G+   A  +F+  +  G   DV+ YN LI+  CK+  +E A  LY EML
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
              I P+++ YNTL++GL ++G +  A +L D+++  D+VPD  T++T IDG CK+G + 
Sbjct: 689 HNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLT 748

Query: 452 EAVQVFQA----------------IRNCKCELRIE------------------TYNCLIN 477
           EA ++F                  I  C  E  +E                   +N LI+
Sbjct: 749 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLID 808

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
             CK G++  A +LF  +  K   P++VT + +I    K   M++A  L LDME +N +P
Sbjct: 809 SFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP 868

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + +T+ +LL  + Q   + K++ L   M A
Sbjct: 869 NTLTYTSLLLSYNQIGNRFKMISLFKDMEA 898



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 256/556 (46%), Gaps = 69/556 (12%)

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG------ 165
           + PD++    +I   CK+G      +VL  + + C  PN  T+N  I GLC  G      
Sbjct: 238 IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLCQTGAVDEAL 296

Query: 166 -----------------------------RIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
                                        R  EA  +F+ +     +PN  T+  LI+G 
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356

Query: 197 CRTRNTLVALKLFEEMVNE------------FGAICK--------------------PDV 224
            +  N   AL++ +EM+               G I K                    PD 
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDT 416

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
            TYN +IDG  K   + KA ELL +MK R + P+  TY+ LI G C   D ++A  +  +
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+ NGV+P+V  +  +I    ++ + +    LL++MI  GV PD   YN L+ G C   +
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A+ L V M  KG + + ++Y   IN   K  +++ A   +++MLS  I P+ + Y  
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ G   VGN  +AL     M    ++PD   ++  I  L KNG   EA+ VF       
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               +  YN LI+G CK G ++ A +L+  + H G  P++V  +T+I+ LCK G++ KA 
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           +L  ++E K+ VP  VT+ T++ G+ ++   ++   L  +M + K +  D  +   ++D 
Sbjct: 717 ELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMIS-KGISPDGYIYCILIDG 775

Query: 585 LSKDKKYRECLNQFRH 600
             K+    + L+ F  
Sbjct: 776 CGKEGNLEKALSLFHE 791



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/531 (30%), Positives = 260/531 (48%), Gaps = 12/531 (2%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           H S    +NE +   D MI+    P +  +  L+    +  +Y+  + L K + +NG+ P
Sbjct: 463 HSSDLQKANEVL---DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           DLF  N LI  LC+      A ++L  +      PN  T+   IN     G I  A R F
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           K +      PN V +  LI G C   NT+ AL  F+ M+ E G I  PD+  Y++II  L
Sbjct: 580 KDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML-EKGLI--PDIRAYSAIIHSL 636

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
            K+G   +A  + L+     + P+V  YNSLI GFC   D ++A  L+ EM+ NG+ P++
Sbjct: 637 SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNI 696

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           V +N +IN  CK G++ K   L + + ++ + PD VTY++++DG+C  G ++ A +LF  
Sbjct: 697 VVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDE 756

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M+SKG   D Y Y ILI+   K+  +E A+ L+ E   + +  S+  +N+L+    + G 
Sbjct: 757 MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGK 815

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           + +A +L D M    + P+  T+   ID   K   + EA Q+F  +          TY  
Sbjct: 816 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTS 875

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L+    ++G       LF  ++ +G   D +    M    CKEG+  +A  LL     + 
Sbjct: 876 LLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEG 935

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
               +  F  L+    +  + S V+ LL +M  E     +LSLSSK  + L
Sbjct: 936 IKLEDDVFDALIFHLCKEKQISTVLELLSEMGKE-----ELSLSSKTCNTL 981



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 254/501 (50%), Gaps = 6/501 (1%)

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
           K+ PSP   ++++L++ L  +        +  ++  NG+ P++F+   LI    +     
Sbjct: 446 KLTPSP--FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYE 503

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            A  +L  ++ +   P+   +N LI GLC   ++ EA  L   +      PN  T+   I
Sbjct: 504 MAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           N   ++    VA + F++M++  G +  P+ V Y  +I G C  G   +A      M ++
Sbjct: 564 NLYSKSGEIQVAERYFKDMLSS-GIV--PNNVIYTILIKGHCDVGNTVEALSTFKCMLEK 620

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            + P++  Y+++I         KEA  +F++ +  GV PDV  +N++I+  CK+G ++K 
Sbjct: 621 GLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKA 680

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           ++L + M+  G+NP+ V YN+L++G C +G +++ARELF  +  K    DV +Y+ +I+ 
Sbjct: 681 SQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDG 740

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK   + +A  L+ EM+S+ I P    Y  L+ G  + GNL  AL L  + Q   V   
Sbjct: 741 YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSL 800

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           S  F + ID  CK+G V+EA ++F  + + K    I TY  LI+   K   ++ A +LF 
Sbjct: 801 S-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFL 859

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            ++ +  IP+ +T ++++    + G   K   L  DMEA+      + +  +   + +  
Sbjct: 860 DMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 919

Query: 554 KKSKVVVLLHKMAAEKLVVSD 574
           K  + + LL+K   E + + D
Sbjct: 920 KSLEALKLLNKSLVEGIKLED 940



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 246/505 (48%), Gaps = 9/505 (1%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D++V  ++    +    +L V ++ I+    +G  + A  V    +   F P  +  N L
Sbjct: 158 DSLVRCYREFGGS----NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNL 213

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           +  L     +    +++  +      P+V T+  +I   C+  + +    +  EM  E  
Sbjct: 214 MRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-- 271

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
             CKP++ TYN+ I GLC+ G VD+A E+   M ++ + P+  TY  L+ GFC     KE
Sbjct: 272 --CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           AK +F  M  +G+ P+  T+ A+I+   K+G +++  R+ + MI RG+  + VTYN+++ 
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G    G +++A  LF  M+  G   D ++YN+LI+   K   +  A  L  EM + ++ P
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           S  TY+ L+SGL    +L  A +++D+M  N V P+ F + T I    +      A+++ 
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +        +  YNCLI GLC+  +++ A  L   +  KG  P+  T    I+   K 
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G++  A     DM +   VP+ V +  L++G        + +    K   EK ++ D+  
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF-KCMLEKGLIPDIRA 628

Query: 578 SSKVVDLLSKDKKYRECLNQFRHLL 602
            S ++  LSK+ K +E +  F   L
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFL 653



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 213/398 (53%), Gaps = 4/398 (1%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            EA+  F CM++    P + +++ ++  L+KN +    + +F +    G+ PD+F+ N LI
Sbjct: 609  EALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLI 668

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
            +  CK G    A  +   +L +   PN V +N LINGLC  G + +A  LF ++      
Sbjct: 669  SGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLV 728

Query: 184  PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            P+VVT++T+I+G C++ N   A KLF+EM+++      PD   Y  +IDG  K+G ++KA
Sbjct: 729  PDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKG---ISPDGYIYCILIDGCGKEGNLEKA 785

Query: 244  KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
              L  + + +++  ++  +NSLI  FC      EA+ LF +M+D  + P++VT+  +I+ 
Sbjct: 786  LSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 844

Query: 304  NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
              K   M++  +L   M  R + P+T+TY SL+  +  +G   +   LF  M ++G   D
Sbjct: 845  YGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACD 904

Query: 364  VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              +Y ++ +A CK+ K  +A+ L  + L E I+     ++ L+  L +   +   L+L+ 
Sbjct: 905  AIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLS 964

Query: 424  KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
            +M   ++   S T  T + G  K+G   EA +V   ++
Sbjct: 965  EMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQ 1002


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 166/479 (34%), Positives = 256/479 (53%), Gaps = 8/479 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    +  L+  L K  + + V+ L + +   G  PD+   N  I+ LCKM     A  +
Sbjct: 250 PNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL 309

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING-LC 197
           + R+L   FTPN+ T+  L++GLC  G++ EA  L  K+     +PNVV FNTLING + 
Sbjct: 310 VDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVS 365

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R R       + E M++     C PD+ TYN++I GLCK G++  A+EL+ +M+ +   P
Sbjct: 366 RGRLDEAKAVMHESMLS---VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 422

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NVITY  LI  FC     +EA+ +  EM   G+  + V +N +I+  CKD K+     + 
Sbjct: 423 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 482

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M  +G  PD  T+NSL+ G C V +   A  L+  M+ +G   +  +YN LI+A  + 
Sbjct: 483 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 542

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             +++A+ L  +ML        ITYN L+  L + GN+   L L + M    + P++ + 
Sbjct: 543 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 602

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I+GLC+ G +  A++  + + +      I TYN LINGLCK GR + A  LF +LQ 
Sbjct: 603 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 662

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
           +G  PD +T +T+I W CKEG  D A+ LL        +P+EVT+  L+  F++   + 
Sbjct: 663 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 153/494 (30%), Positives = 257/494 (52%), Gaps = 8/494 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   S+ ++L +L        V ++F  + S G+ P ++   +++  LC +     A  
Sbjct: 179 EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACA 238

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  + R    PN + +  LI+ L   GR+ E  +L +++ +  C P+V TFN  I+GLC
Sbjct: 239 LLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC 298

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +      A KL + M+        P+  TY  ++ GLC+ G VD+A+ LL    ++  NP
Sbjct: 299 KMLRIHEAAKLVDRMLLRG---FTPNSFTYGVLMHGLCRMGKVDEARMLL----NKVPNP 351

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIE-MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           NV+ +N+LI G+       EAK +  E M+  G  PD+ T+N +I   CK G +     L
Sbjct: 352 NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 411

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           +  M  +G  P+ +TY  L+D FC  GR+  AR +   M  KG   +   YN LI+A CK
Sbjct: 412 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 471

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           D+KV+DA+ ++ +M S+  +P + T+N+L+ GL +V    +AL L   M L  V+ ++ T
Sbjct: 472 DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTIT 531

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + T I    + G + EA+++   +    C L   TYN LI  LC+ G ++    LF  + 
Sbjct: 532 YNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 591

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG  P+ ++C+ +I+ LC+ G +  A + L DM  +   P  VT+ +L+ G  +  +  
Sbjct: 592 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 651

Query: 557 KVVVLLHKMAAEKL 570
           + + L  K+  E +
Sbjct: 652 EALNLFDKLQVEGI 665



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 205/392 (52%), Gaps = 8/392 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    D M+    +P   ++ +L+  L +  + D    L  ++ +    P++ + N L
Sbjct: 304 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTL 359

Query: 123 INCLCKMGITSGAFVVLGRILRSCF-TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           IN     G    A  V+   + S    P+  T+N LI GLC +G ++ A  L  ++ +  
Sbjct: 360 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 419

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C+PNV+T+  LI+  C+      A  + +EM  +  A+   + V YN +I  LCKD  V 
Sbjct: 420 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL---NAVGYNCLISALCKDEKVQ 476

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  +   M  +   P++ T+NSLI G C V+ ++EA  L+ +M+  GV  + +T+N +I
Sbjct: 477 DALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLI 536

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   + G M +  +L+  M+ RG   D +TYN L+   C  G I +   LF  M+SKG  
Sbjct: 537 HAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN 596

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  S NILIN  C+   ++ A+   R+M+   + P ++TYN+L++GL + G   +AL L
Sbjct: 597 PNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNL 656

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            DK+Q+  + PD+ T+ T I   CK G   +A
Sbjct: 657 FDKLQVEGICPDAITYNTLISWHCKEGMFDDA 688



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 190/373 (50%), Gaps = 4/373 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVS-LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
           P+P +  F  L+       + D   + + + + S G  PD+F  N LI  LCK G    A
Sbjct: 349 PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 408

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             ++  +      PN +T+  LI+  C EGR+ EA  +  +++      N V +N LI+ 
Sbjct: 409 RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISA 468

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           LC+      AL +F +M ++    CKPD+ T+NS+I GLCK    ++A  L   M    +
Sbjct: 469 LCKDEKVQDALNMFGDMSSKG---CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 525

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
             N ITYN+LI  F      +EA  L  +M+  G   D +T+N +I   C+ G ++K   
Sbjct: 526 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 585

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L E M+ +G+NP+ ++ N L++G C  G I  A E    M+ +G   D+ +YN LIN  C
Sbjct: 586 LFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC 645

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K  + ++A+ L+ ++  E I P  ITYNTL+S   + G   DA  L+ +   +  +P+  
Sbjct: 646 KTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEV 705

Query: 436 TFATYIDGLCKNG 448
           T+   +    K G
Sbjct: 706 TWYILVSNFIKEG 718



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 208/415 (50%), Gaps = 9/415 (2%)

Query: 169 EAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
           +A RL   +  V++C+P   ++N +++ L       V   +F EM+++      P V T+
Sbjct: 164 QATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKG---ISPTVYTF 220

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
             ++  LC    VD A  LL  M      PN I Y +LI     V    E   L  EM+ 
Sbjct: 221 GVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLL 280

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G  PDV TFN  I+  CK  ++ +  +L++ M+ RG  P++ TY  LM G C +G++  
Sbjct: 281 MGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDE 340

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA-VCLYREMLSERIRPSVITYNTLL 406
           AR L    ++K    +V  +N LIN      ++++A   ++  MLS    P + TYNTL+
Sbjct: 341 ARML----LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLI 396

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL + G L  A +L+++MQ+    P+  T+   ID  CK G + EA  V   +      
Sbjct: 397 LGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLA 456

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           L    YNCLI+ LCK  +++ A  +F  +  KG  PD+ T +++I  LCK  + ++A  L
Sbjct: 457 LNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGL 516

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
             DM  +  + + +T+ TL+  F++     + + L++ M      + D++ +  +
Sbjct: 517 YQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 571



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 242/496 (48%), Gaps = 11/496 (2%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL--GR 141
           + +L+  L    ++ T+ +L  ++   G+     +  L++    + G+   A  +L   R
Sbjct: 114 YYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMR 173

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
            + SC  P   ++N +++ L A         +F ++      P V TF  ++  LC    
Sbjct: 174 GVYSC-EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A  L ++M       C P+ + Y ++I  L K G V++  +LL +M      P+V T
Sbjct: 233 VDSACALLKDMTRHG---CVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNT 289

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +N  I G C +    EA  L   M+  G  P+  T+  +++  C+ GK+D+   LL    
Sbjct: 290 FNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL---- 345

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARE-LFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            +  NP+ V +N+L++G+   GR+  A+  +  SM+S GC  D+++YN LI   CK   +
Sbjct: 346 NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYL 405

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
             A  L  EM  +   P+VITY  L+    + G L +A  ++D+M    +  ++  +   
Sbjct: 406 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCL 465

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I  LCK+  V +A+ +F  + +  C+  I T+N LI GLCK+ + + A  L+  +  +G 
Sbjct: 466 ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 525

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           I + +T +T+IH   + G M +A  L+ DM  + C   ++T+  L++   +     K + 
Sbjct: 526 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 585

Query: 561 LLHKMAAEKLVVSDLS 576
           L   M ++ L  +++S
Sbjct: 586 LFEDMMSKGLNPNNIS 601



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 181/365 (49%), Gaps = 4/365 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N     G +   +AV   + M+ +   P + ++  L+  L K     +   L   +  
Sbjct: 359 LINGYVSRGRLDEAKAV-MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 417

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G  P++    +LI+  CK G    A  VL  +       N V +N LI+ LC + ++ +
Sbjct: 418 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQD 477

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  +F  ++   C P++ TFN+LI GLC+      AL L+++M+ E G I   + +TYN+
Sbjct: 478 ALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE-GVIA--NTITYNT 534

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I    + G + +A +L+  M  R    + ITYN LI   C   + ++   LF +MM  G
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           + P+ ++ N +IN  C+ G +      L  MI RG+ PD VTYNSL++G C  GR   A 
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            LF  +  +G   D  +YN LI+ +CK+   +DA  L    +     P+ +T+  L+S  
Sbjct: 655 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 714

Query: 410 FQVGN 414
            + G+
Sbjct: 715 IKEGD 719



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 183/370 (49%), Gaps = 7/370 (1%)

Query: 236 KDGFVDKAKELLLQMKD-RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           + G   +A  LLL M+   +  P   +YN ++      +  K    +F EM+  G+ P V
Sbjct: 158 RAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTV 217

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            TF  ++   C   ++D    LL+ M + G  P+ + Y +L+     VGR++   +L   
Sbjct: 218 YTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEE 277

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M+  GC  DV ++N  I+  CK  ++ +A  L   ML     P+  TY  L+ GL ++G 
Sbjct: 278 MLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK 337

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCELRIETYN 473
           + +A  L++K+      P+   F T I+G    G + EA  V  +++ +  C   I TYN
Sbjct: 338 VDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYN 393

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI GLCK G L +A +L + +Q KG  P+V+T + +I   CKEG++++A ++L +M  K
Sbjct: 394 TLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK 453

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
               + V +  L+    ++ K    + +   M+++       + +S +   L K  K+ E
Sbjct: 454 GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG-LCKVNKFEE 512

Query: 594 CLNQFRHLLF 603
            L  ++ +L 
Sbjct: 513 ALGLYQDMLL 522



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 3/249 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F  M      P + +F  L+  L K  +++  + L++ +   G+  +    N L
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   + G    A  ++  +L      + +T+N LI  LC  G I +   LF+ +     
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 595

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +PN ++ N LINGLCRT N   AL+   +M++       PD+VTYNS+I+GLCK G   +
Sbjct: 596 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRG---LTPDIVTYNSLINGLCKTGRAQE 652

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +++   I P+ ITYN+LI   C    + +A  L    +D+G  P+ VT+  +++
Sbjct: 653 ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 712

Query: 303 YNCKDGKMD 311
              K+G  +
Sbjct: 713 NFIKEGDQE 721


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 163/508 (32%), Positives = 269/508 (52%), Gaps = 19/508 (3%)

Query: 91  LAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP 149
           + ++ + D  +  F      +G   D+   N L++ L K G       V   +L S  +P
Sbjct: 1   MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSP 60

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           N VTF  LI G C  G+   A    + L+ F+  P+V  FN LI+GL +  N   A+KLF
Sbjct: 61  NLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLF 120

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN--PNVITYNSLI- 266
           E M +   +   PD+ TYN++I GLCK G ++KA+ELL +M  R     P+++TYN+LI 
Sbjct: 121 ENMES---SRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLIN 177

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C   D +EA  +   M   G  PDV+T+N++I+  C  G++ +   +L+ M     +
Sbjct: 178 AGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCS 234

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD VT+N+L+DGFC  G + RA E+   M  +    DV +Y IL+N  C+  +V+ A  L
Sbjct: 235 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL 294

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV---------VPDSFTF 437
             E++ +   P VI Y +L+ GL + G + +A KL+ +M   ++         VP  FT+
Sbjct: 295 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTY 354

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              + GL K+G + +AV +   +        + TYN LI+GLCK  R++ AC L   +  
Sbjct: 355 NIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMAS 414

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G  P+ VT  +++  LC+ G++D A  L+++M  K   P+ V + +L+ G  ++++   
Sbjct: 415 LGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDD 474

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
             V+L  M  + + + D +    +V ++
Sbjct: 475 ACVVLDAMRGQGVALDDFAYRKLIVSMI 502



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 165/514 (32%), Positives = 264/514 (51%), Gaps = 15/514 (2%)

Query: 65  AVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           A+ FFD   +       + S+  LL +L K+        ++K L  +G  P+L    +LI
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CK G  + A   L  +      P+   FNFLI+GL  +G   +A +LF+ +     +
Sbjct: 70  RGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVN 129

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID-GLCKDGFVDK 242
           P++ T+NT+I+GLC++ N   A +L EEM+   G    PD+VTYN++I+ G+CKDG V++
Sbjct: 130 PDIFTYNTVISGLCKSGNLEKARELLEEMIRR-GGKSAPDIVTYNTLINAGICKDGDVEE 188

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+L  MK     P+VITYNS+I   C      EA  +   M      PD+VTFN +++
Sbjct: 189 ALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLD 245

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G + +   +LE M +  + PD +TY  L++G C VG++  A  L   +V +G   
Sbjct: 246 GFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP 305

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIR---------PSVITYNTLLSGLFQVG 413
           DV +Y  L++  CK  ++E+A  L +EM +  I          P + TYN +L GL + G
Sbjct: 306 DVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDG 365

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           ++  A+ LI  +     VPD  T+ T IDGLCK   V EA  +   + +  C     T  
Sbjct: 366 SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLG 425

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            ++ GLC++GR+  A  L   +  K   P+VV  +++I  LCK  +MD A  +L  M  +
Sbjct: 426 SVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQ 485

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
                +  +  L+   +   + ++ + +  +M A
Sbjct: 486 GVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVA 519



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/467 (31%), Positives = 245/467 (52%), Gaps = 20/467 (4%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G  T   A+ F   + +   +P +  F  L+  L K+   D  V LF+ + S+ + PD
Sbjct: 74  KAGQAT--RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPD 131

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSC--FTPNTVTFNFLIN-GLCAEGRIMEAAR 172
           +F  N +I+ LCK G    A  +L  ++R      P+ VT+N LIN G+C +G + EA  
Sbjct: 132 IFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALE 191

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           +   + +    P+V+T+N++I+ LC     + A ++ + M       C PD+VT+N+++D
Sbjct: 192 ILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS------CSPDLVTFNTLLD 245

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G CK G + +A E+L +M   NI P+VITY  L+ G C V   + A  L  E++  G  P
Sbjct: 246 GFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP 305

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV---------NPDTVTYNSLMDGFCLVG 343
           DV+ + ++++  CK G++++ ++L++ M  R +          P   TYN ++ G    G
Sbjct: 306 DVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDG 365

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            IS+A  L   +V++G   DV +YN LI+  CK  +V +A  L  EM S    P+ +T  
Sbjct: 366 SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLG 425

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +++ GL +VG + DA  L+ +M      P+   + + IDGLCK+  + +A  V  A+R  
Sbjct: 426 SVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQ 485

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
              L    Y  LI  +   GR+  A  ++  +  +G +PD  T  T+
Sbjct: 486 GVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 206/436 (47%), Gaps = 49/436 (11%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG--LF 113
           K GN   ++AV  F+ M   + +P + ++  +++ L K+   +    L + +   G    
Sbjct: 109 KDGN--PDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSA 166

Query: 114 PDLFVLNLLINC-LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
           PD+   N LIN  +CK G    A  +L  +  +   P+ +T+N +I+ LC  GR++EAA 
Sbjct: 167 PDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAE 226

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------FGAIC 220
           + K +   +C P++VTFNTL++G C+      AL++ EEM  E               +C
Sbjct: 227 ILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 283

Query: 221 K--------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR------- 253
           +                    PDV+ Y S++DGLCK G +++A +L+ +M  R       
Sbjct: 284 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMV 343

Query: 254 --NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             N+ P + TYN ++ G        +A  L  +++  G  PDVVT+N +I+  CK  ++ 
Sbjct: 344 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 403

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   L + M   G  P+ VT  S++ G C VGR+  A  L V M  K    +V  Y  LI
Sbjct: 404 EACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 463

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CK  +++DA  +   M  + +      Y  L+  +   G + +A+ + D+M     +
Sbjct: 464 DGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFL 523

Query: 432 PDSFTFATYIDGLCKN 447
           PD  T  T  +    N
Sbjct: 524 PDGSTSKTLEEAAMSN 539



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 165/310 (53%), Gaps = 7/310 (2%)

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           +G + DV ++N +++   K G   +  ++ + ++  G +P+ VT+  L+ G C  G+ +R
Sbjct: 21  DGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATR 80

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A E   ++       DVY +N LI+   KD   + AV L+  M S R+ P + TYNT++S
Sbjct: 81  ALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVIS 140

Query: 408 GLFQVGNLGDALKLIDKM--QLNDVVPDSFTFATYID-GLCKNGFVLEAVQVFQAIRNCK 464
           GL + GNL  A +L+++M  +     PD  T+ T I+ G+CK+G V EA+++   ++   
Sbjct: 141 GLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAG 200

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + TYN +I+ LC  GR+  A ++   +      PD+VT +T++   CK G + +A 
Sbjct: 201 PAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRAL 257

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           ++L +M  +N +P  +T+  L+ G  +  +      LL ++  +   + D+   + +VD 
Sbjct: 258 EVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY-IPDVIAYTSLVDG 316

Query: 585 LSKDKKYREC 594
           L K  +  E 
Sbjct: 317 LCKSGEIEEA 326


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 174/587 (29%), Positives = 273/587 (46%), Gaps = 66/587 (11%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+ + D   +  P  G+ ++T LL  L K     TV+  + ++   GL P+L + N +I
Sbjct: 176 QALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVI 235

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N LCK G    A  ++ ++ +S   P+T T+  +I G C    +  A  +F +++   C+
Sbjct: 236 NALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCE 295

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEM--------VNEFGAI---------------- 219
           PN  T++TLINGLC +     AL    EM        V+ F A                 
Sbjct: 296 PNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKI 355

Query: 220 --------CKPDVVTYNSIIDG-------------LCKDGFV------------------ 240
                   CKP+V TY S+I G             + +DG V                  
Sbjct: 356 FIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENME 415

Query: 241 -DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
            D A  +   M      PN  +YN LI G+C + D ++A  +   M+     P +VT+N 
Sbjct: 416 IDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNI 475

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I   C  G  D   R+LELM   G  PD  +Y  L+ GFC + ++  A  +F  M+ +G
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              +  +Y  LI+  CKD+K++ A  +   M     RP+V TYN L+ GL +  N   A 
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 595

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +L   M    + PD  T++T I+GLC NG +  A+++F  +    C   + TY+ LI  L
Sbjct: 596 ELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQAL 655

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
            + GR++ A ++F  L+ +G IPD VT   MI      G++D+A D L +M    C P+ 
Sbjct: 656 GQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTL 715

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
            T+  L++G        K+V L +  AA      D  ++  V+ +LS
Sbjct: 716 QTYDVLIKGLQNEMVYHKLVALPN--AASTSTFDDQIINKDVISVLS 760



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 246/548 (44%), Gaps = 60/548 (10%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           SG   S  A+  F  M +    P   ++  L+ +L +N + D+ + +F  +  +G  P+ 
Sbjct: 376 SGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNT 435

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              N LI   C +G T  A  +L  +L+   TP  VT+N +I G C  G    A R+ + 
Sbjct: 436 SSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLEL 495

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +    C P+  ++  LI+G C+     +A  +F EM++    +C P+ VTY ++I G CK
Sbjct: 496 MKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDR--GLC-PNEVTYTALISGYCK 552

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           D  +D A  +L +MK     PNV TYN LI G    +++  A+ L   M++  + PDVVT
Sbjct: 553 DEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVT 612

Query: 297 --------------------FNAMINYNC---------------KDGKMDKVNRLLELMI 321
                               FN M+ + C               ++G++++   +   + 
Sbjct: 613 YSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELK 672

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI---------- 371
           ++G+ PD VTY  +++   + G++ RA +    M++ GC+  + +Y++LI          
Sbjct: 673 KQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYH 732

Query: 372 ----------NANCKDQKV-EDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDAL 419
                      +   DQ + +D + +    L+E     S   Y+ LLS L + G   +A 
Sbjct: 733 KLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEAN 792

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L   M      P+  T+  ++  L +   V  A+ VF+ + + +CEL +  Y  LI  L
Sbjct: 793 NLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTL 852

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C++ R K A  +F ++  +    D +  + +I+ L   G  D   + L  ME     PS 
Sbjct: 853 CQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSS 912

Query: 540 VTFCTLLR 547
                L R
Sbjct: 913 HARTILAR 920



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 183/365 (50%), Gaps = 4/365 (1%)

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TY +++  L K        +   Q+    + PN++ YNS+I   C   + ++A+ +  ++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
             +G++PD  T+ +MI   C++  +D    +   M + G  P+  TY++L++G C  GR+
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
           + A +    M   G    V+++   I A C   ++EDA  ++ +M  +  +P+V TY +L
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           +SG  +V  +  A+ L  +M  + VVP++ T+   ++ L +N  +  A+ VF  +    C
Sbjct: 375 ISGQ-RVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGC 431

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                +YN LI G C +G  + A  +   +    P P +VT + +I   C  G  D A  
Sbjct: 432 LPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIR 491

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           +L  M+A  C P E ++  L+ GF + +K      + ++M    L  ++++ ++ ++   
Sbjct: 492 VLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTA-LISGY 550

Query: 586 SKDKK 590
            KD+K
Sbjct: 551 CKDEK 555



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 131/298 (43%), Gaps = 32/298 (10%)

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           MI       +M +    L++  QRG      TY +L+     +   S   + +  ++ +G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + ++  YN +INA CKD  V DA  +  ++    ++P   TY +++ G  +  +L  A 
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           ++ ++M      P++ T++T I+GLC +G V EA+     +        + T+   I  L
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 480 CKMGRLKTACK--------------------------------LFHRLQHKGPIPDVVTC 507
           C MGR++ A K                                LFHR+   G +P+ VT 
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTY 403

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           + +++ L +  ++D A  +   M    C+P+  ++  L+RG+       K + +L  M
Sbjct: 404 NALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 2/197 (1%)

Query: 390 MLSERIRPSVITYNT--LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           +L  R RP+ +      ++        +  AL  +D           FT+ T +  L K 
Sbjct: 147 LLESRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKL 206

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
                 +  +  I     +  +  YN +IN LCK G ++ A  + +++   G  PD  T 
Sbjct: 207 NMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTY 266

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           ++MI   C+   +D A ++   M+ + C P+  T+ TL+ G   + + ++ +  + +M  
Sbjct: 267 TSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTR 326

Query: 568 EKLVVSDLSLSSKVVDL 584
             ++ +  + ++ +V L
Sbjct: 327 HGVLPTVHTFTAPIVAL 343


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/505 (31%), Positives = 255/505 (50%), Gaps = 5/505 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA      + +    P   ++T L+    +N   D   ++F R+  +G  P+    + L
Sbjct: 219 QEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL 278

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LC  G    A  +L  +++    P   T+   +  LC  G   EA  L  K+    C
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ TF  LI+GL R     +A+ L+ +M+ + G +  P  VTYN++I+ LC +G  + 
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD-GLV--PTTVTYNALINQLCVEGRFET 395

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +   M      P+  TYN +I  FC + D ++A  +F +M+  G  P+V+T+N +I 
Sbjct: 396 AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIY 455

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G ++   RLLE+M   G+ PD  TY  L+ GF   G++  A  LF  M+  G   
Sbjct: 456 GYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISP 515

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  +Y  +I+      KV+DA+ L+ +M+     PS  TYN ++SG  +  ++ +A    
Sbjct: 516 NHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            KM    ++P+  T+ ++IDGLC+NG    A ++F  +        + TY+ LI GLC+ 
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQE 635

Query: 483 GRLKTA--CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           GR + A    L  RL H G  P+V T +T++  LC EG+  +A+ L++ M+ K   PSE 
Sbjct: 636 GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE 695

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
            +  LL G  +N K    + + + M
Sbjct: 696 IYRALLIGECKNLKVESALNIFYSM 720



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 151/488 (30%), Positives = 245/488 (50%), Gaps = 5/488 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S+EAV     M K    P + +FT L++ L+++ +++  + L+ ++ ++GL P     N 
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LIN LC  G    AF +   +L     P+T T+N +I   C  G I +A  +F K+    
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PNV+T+NTLI G C+  N   A++L E M    G   KPD  TY  +I G  + G ++
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK---GNGLKPDAWTYTELISGFSRGGKLE 499

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  L   M +  I+PN +TY ++I G+  +    +A  LF +M+++G  P   T+N MI
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K   + +       M+++G+ P+ +TY S +DG C  GR   A ++F  M  +   
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF 619

Query: 362 HDVYSYNILINANCKDQKVEDAVC--LYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            ++Y+Y+ LI   C++ + EDA    L   +      P+V TY TL+ GL   G   +A 
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +L+  MQ   + P    +   + G CKN  V  A+ +F ++     +L +  Y  LI  L
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICAL 739

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK   ++ A  +F  +  K    D V  + ++  L KEG+ D    LL  ME++NC  + 
Sbjct: 740 CKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNF 799

Query: 540 VTFCTLLR 547
            T+  L R
Sbjct: 800 QTYVMLAR 807



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 230/449 (51%), Gaps = 3/449 (0%)

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           ++L S   P+ +TFN +IN LC +GR+ EA  +   +  +   PN  T+ +LI G CR  
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           N  +A  +F+ MV +    C P+ VTY+++I+GLC +G +++A ++L +M  + I P V 
Sbjct: 252 NLDLAFAMFDRMVKDG---CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVY 308

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY   +   C      EA  L  +M   G  P++ TF A+I+   +DGK +    L   M
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           +  G+ P TVTYN+L++  C+ GR   A  +F  M+S G      +YN +I   C    +
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           + A+ ++ +ML     P+VITYNTL+ G  + GNL +A++L++ M+ N + PD++T+   
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I G  + G +  A  +F  +          TY  +I+G   + ++  A  LF ++   G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           +P   T + MI    K   + +A +    M  +  +P+ +T+ + + G  +N +      
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           + H+M       +  + SS +  L  + +
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 210/430 (48%), Gaps = 5/430 (1%)

Query: 138 VLGRILRS-CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV-FACDPNVVTFNTLING 195
           +L R++R   F P       +I     EG +    +   ++N  +     + +F TL+  
Sbjct: 117 MLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQ 176

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           L +     +A  ++ +M+N   +  +P ++T+N++I+ LCK G V +AK ++  +   + 
Sbjct: 177 LGKFDMVDLARDMYIKMLN---SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PN  TY SLI G C   +   A  +F  M+ +G  P+ VT++ +IN  C +G++++   
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           +LE M+Q+G+ P   TY   +   C  G  S A EL   M  +GC  ++ ++  LI+   
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLS 353

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           +D K E A+ LY +ML++ + P+ +TYN L++ L   G    A  +   M  +  +P + 
Sbjct: 354 RDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ 413

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+   I   C  G + +A+ +F  +        + TYN LI G CK G L  A +L   +
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +  G  PD  T + +I    + G+++ A  L   M      P+ VT+  ++ G+    K 
Sbjct: 474 KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKV 533

Query: 556 SKVVVLLHKM 565
              + L  KM
Sbjct: 534 DDALALFWKM 543



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 136/261 (52%), Gaps = 2/261 (0%)

Query: 343 GRISRARELFVSMVSK-GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           G + R  +    + SK    + + S+  L+    K   V+ A  +Y +ML+  IRPS++T
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +NT+++ L + G + +A  ++  +   D  P++FT+ + I G C+N  +  A  +F  + 
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
              C+    TY+ LINGLC  GRL+ A  +   +  KG  P V T +  +  LC  G   
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A +LL  M+ + CVP+  TF  L+ G  ++ K    + L HKM A+ LV + ++ ++ +
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA-L 383

Query: 582 VDLLSKDKKYRECLNQFRHLL 602
           ++ L  + ++      F+ +L
Sbjct: 384 INQLCVEGRFETAFTIFKWML 404


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/505 (31%), Positives = 255/505 (50%), Gaps = 5/505 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA      + +    P   ++T L+    +N   D   ++F R+  +G  P+    + L
Sbjct: 219 QEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL 278

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LC  G    A  +L  +++    P   T+   +  LC  G   EA  L  K+    C
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ TF  LI+GL R     +A+ L+ +M+ + G +  P  VTYN++I+ LC +G  + 
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD-GLV--PTTVTYNALINQLCVEGRFET 395

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +   M      P+  TYN +I  FC + D ++A  +F +M+  G  P+V+T+N +I 
Sbjct: 396 AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIY 455

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G ++   RLLE+M   G+ PD  TY  L+ GF   G++  A  LF  M+  G   
Sbjct: 456 GYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISP 515

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  +Y  +I+      KV+DA+ L+ +M+     PS  TYN ++SG  +  ++ +A    
Sbjct: 516 NHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            KM    ++P+  T+ ++IDGLC+NG    A ++F  +        + TY+ LI GLC+ 
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQE 635

Query: 483 GRLKTA--CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           GR + A    L  RL H G  P+V T +T++  LC EG+  +A+ L++ M+ K   PSE 
Sbjct: 636 GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE 695

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
            +  LL G  +N K    + + + M
Sbjct: 696 IYRALLIGECKNLKVESALNIFYSM 720



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 151/488 (30%), Positives = 245/488 (50%), Gaps = 5/488 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S+EAV     M K    P + +FT L++ L+++ +++  + L+ ++ ++GL P     N 
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LIN LC  G    AF +   +L     P+T T+N +I   C  G I +A  +F K+    
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PNV+T+NTLI G C+  N   A++L E M    G   KPD  TY  +I G  + G ++
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK---GNGLKPDAWTYTELISGFSRGGKLE 499

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  L   M +  I+PN +TY ++I G+  +    +A  LF +M+++G  P   T+N MI
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K   + +       M+++G+ P+ +TY S +DG C  GR   A ++F  M  +   
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF 619

Query: 362 HDVYSYNILINANCKDQKVEDAVC--LYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            ++Y+Y+ LI   C++ + EDA    L   +      P+V TY TL+ GL   G   +A 
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +L+  MQ   + P    +   + G CKN  V  A+ +F ++     +L +  Y  LI  L
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICAL 739

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK   ++ A  +F  +  K    D V  + ++  L KEG+ D    LL  ME++NC  + 
Sbjct: 740 CKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNF 799

Query: 540 VTFCTLLR 547
            T+  L R
Sbjct: 800 QTYVMLAR 807



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 228/444 (51%), Gaps = 3/444 (0%)

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           ++L S   P+ +TFN +IN LC +GR+ EA  +   +  +   PN  T+ +LI G CR  
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           N  +A  +F+ MV +    C P+ VTY+++I+GLC +G +++A ++L +M  + I P V 
Sbjct: 252 NLDLAFAMFDRMVKDG---CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVY 308

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY   +   C      EA  L  +M   G  P++ TF A+I+   +DGK +    L   M
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           +  G+ P TVTYN+L++  C+ GR   A  +F  M+S G      +YN +I   C    +
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           + A+ ++ +ML     P+VITYNTL+ G  + GNL +A++L++ M+ N + PD++T+   
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I G  + G +  A  +F  +          TY  +I+G   + ++  A  LF ++   G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           +P   T + MI    K   + +A +    M  +  +P+ +T+ + + G  +N +      
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDL 584
           + H+M       +  + SS +  L
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGL 632



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 210/430 (48%), Gaps = 5/430 (1%)

Query: 138 VLGRILRS-CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV-FACDPNVVTFNTLING 195
           +L R++R   F P       +I     EG +    +   ++N  +     + +F TL+  
Sbjct: 117 MLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQ 176

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           L +     +A  ++ +M+N   +  +P ++T+N++I+ LCK G V +AK ++  +   + 
Sbjct: 177 LGKFDMVDLARDMYIKMLN---SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PN  TY SLI G C   +   A  +F  M+ +G  P+ VT++ +IN  C +G++++   
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           +LE M+Q+G+ P   TY   +   C  G  S A EL   M  +GC  ++ ++  LI+   
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLS 353

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           +D K E A+ LY +ML++ + P+ +TYN L++ L   G    A  +   M  +  +P + 
Sbjct: 354 RDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ 413

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+   I   C  G + +A+ +F  +        + TYN LI G CK G L  A +L   +
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +  G  PD  T + +I    + G+++ A  L   M      P+ VT+  ++ G+    K 
Sbjct: 474 KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKV 533

Query: 556 SKVVVLLHKM 565
              + L  KM
Sbjct: 534 DDALALFWKM 543



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 136/261 (52%), Gaps = 2/261 (0%)

Query: 343 GRISRARELFVSMVSK-GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           G + R  +    + SK    + + S+  L+    K   V+ A  +Y +ML+  IRPS++T
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +NT+++ L + G + +A  ++  +   D  P++FT+ + I G C+N  +  A  +F  + 
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
              C+    TY+ LINGLC  GRL+ A  +   +  KG  P V T +  +  LC  G   
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A +LL  M+ + CVP+  TF  L+ G  ++ K    + L HKM A+ LV + ++ ++ +
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA-L 383

Query: 582 VDLLSKDKKYRECLNQFRHLL 602
           ++ L  + ++      F+ +L
Sbjct: 384 INQLCVEGRFETAFTIFKWML 404


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/505 (30%), Positives = 268/505 (53%), Gaps = 5/505 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    +  +L +L        V     +++  G+ PD+   N+LI  LC+      A ++
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +      P+  TF  ++ G   EG +  A R+ +++  F C  + V+ N +++G C+
Sbjct: 212 LEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 AL   +EM N+ G    PD  T+N++++GLCK G V  A E++  M     +P+
Sbjct: 272 EGRVEDALNFIQEMSNQDGFF--PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TYNS+I G C + + KEA     +M+     P+ VT+N +I+  CK+ ++++   L  
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           ++  +G+ PD  T+NSL+ G CL      A ELF  M SKGC  D ++YN+LI++ C   
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K+++A+ + ++M       SVITYNTL+ G  +   + +A ++ D+M+++ V  +S T+ 
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYN 509

Query: 439 TYIDGLCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           T IDGLCK+  V +A Q+  Q I   +   +  TYN L+   C+ G +K A  +   +  
Sbjct: 510 TLIDGLCKSRRVEDASQLMDQMIMEGQKPDKF-TYNSLLTHFCRGGDIKKAADIVQAMTS 568

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G  PD+VT  T+I  LCK G+++ A+ LL  ++ K    +   +  +++G  +  K ++
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTE 628

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVV 582
            + L  +M  +     D ++S ++V
Sbjct: 629 AINLFREMLEQNEAAPD-AVSYRIV 652



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 153/473 (32%), Positives = 247/473 (52%), Gaps = 5/473 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +++F +L+  L +  Q    + + + + S GL PD      ++    + G   GA  +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLC 197
             +++    + + V+ N +++G C EGR+ +A    +++ N     P+  TFNTL+NGLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  +   A+++ + M+ E      PDV TYNS+I GLCK G V +A E L QM  R+ +P
Sbjct: 307 KAGHVKHAIEIMDVMLQEG---YDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N +TYN+LI   C  +  +EA  L   +   G+ PDV TFN++I   C          L 
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M  +G  PD  TYN L+D  C  G++  A  +   M   GC   V +YN LI+  CK 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            K+ +A  ++ EM    +  + +TYNTL+ GL +   + DA +L+D+M +    PD FT+
Sbjct: 484 NKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTY 543

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            + +   C+ G + +A  + QA+ +  CE  I TY  LI+GLCK GR++ A KL   +Q 
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM-EAKNCVPSEVTFCTLLRGF 549
           KG        + +I  L ++ +  +A +L  +M E     P  V++  + RG 
Sbjct: 604 KGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGL 656



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/423 (34%), Positives = 226/423 (53%), Gaps = 5/423 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +F  L+  L K       + +   +   G  PD++  N +I+ LCK+G    A   
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L +++    +PNTVT+N LI+ LC E ++ EA  L + L      P+V TFN+LI GLC 
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           TRN  VA++LFEEM ++    C+PD  TYN +ID LC  G +D+A  +L QM+      +
Sbjct: 413 TRNHRVAMELFEEMRSKG---CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           VITYN+LI GFC  +  +EA+ +F EM  +GV  + VT+N +I+  CK  +++  ++L++
Sbjct: 470 VITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMD 529

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MI  G  PD  TYNSL+  FC  G I +A ++  +M S GC  D+ +Y  LI+  CK  
Sbjct: 530 QMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTF 437
           +VE A  L R +  + I  +   YN ++ GLF+     +A+ L  +M + N+  PD+ ++
Sbjct: 590 RVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSY 649

Query: 438 ATYIDGLCKNGF-VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
                GLC  G  + EAV     +          +   L  GL  +   +T  KL + + 
Sbjct: 650 RIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVM 709

Query: 497 HKG 499
            K 
Sbjct: 710 QKA 712



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 180/626 (28%), Positives = 295/626 (47%), Gaps = 38/626 (6%)

Query: 6   SHRSFSLASKAGYRCNFWCSFGRPPNPKTDLSSHHFK---------DGTSIAKFLNDRHK 56
           +H SFSL            SF  P +    LSS   K         D ++  +  N   K
Sbjct: 21  THHSFSLKLTPPSST---ISFASPNSAA--LSSSDVKLLDSLRSQADDSAALRLFNLASK 75

Query: 57  SGNITSNEAVY-----------FFDCMIK----MKPSP---GMTSFTILLTMLAKNKQYD 98
             N +   A+Y            FD M K    MK S    G + F IL+   A+ +  D
Sbjct: 76  KPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQD 135

Query: 99  TVVSLFK-RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
            ++ +    ++  GL PD    N ++N L          +   ++      P+  TFN L
Sbjct: 136 EILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVL 195

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           I  LC   ++  A  + + +  +   P+  TF T++ G     +   AL++ E+MV EFG
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMV-EFG 254

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVITYNSLICGFCCVDDWK 276
             C    V+ N I+ G CK+G V+ A   + +M +++   P+  T+N+L+ G C     K
Sbjct: 255 --CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
            A  +   M+  G  PDV T+N++I+  CK G++ +    L+ MI R  +P+TVTYN+L+
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLI 372

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
              C   ++  A EL   + SKG   DV ++N LI   C  +    A+ L+ EM S+   
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P   TYN L+  L   G L +AL ++ +M+L+       T+ T IDG CK   + EA ++
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEI 492

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F  +          TYN LI+GLCK  R++ A +L  ++  +G  PD  T ++++   C+
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCR 552

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            G + KA D++  M +  C P  VT+ TL+ G  +  +      LL  +  + + ++  +
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHA 612

Query: 577 LSSKVVDLLSKDKKYRECLNQFRHLL 602
            +  V+  L + +K  E +N FR +L
Sbjct: 613 YNP-VIQGLFRKRKTTEAINLFREML 637



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 200/409 (48%), Gaps = 13/409 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV F D MI    SP   ++  L++ L K  Q +    L + L S G+ PD+   N LI
Sbjct: 348 EAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC       A  +   +      P+  T+N LI+ LC++G++ EA  + K++ +  C 
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            +V+T+NTLI+G C+      A ++F+EM  E   + + + VTYN++IDGLCK   V+ A
Sbjct: 468 RSVITYNTLIDGFCKANKIREAEEIFDEM--EVHGVSR-NSVTYNTLIDGLCKSRRVEDA 524

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L+ QM      P+  TYNSL+  FC   D K+A  +   M  NG +PD+VT+  +I+ 
Sbjct: 525 SQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-CRH 362
            CK G+++  ++LL  +  +G+      YN ++ G     + + A  LF  M+ +     
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAP 644

Query: 363 DVYSYNILINANCK-DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
           D  SY I+    C     + +AV    E+L +   P   +   L  GL  +      +KL
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKL 704

Query: 422 ID----KMQLND----VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           ++    K + ++    +V        + D L   G VL++ Q  +  R+
Sbjct: 705 VNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTYRS 753


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 264/499 (52%), Gaps = 5/499 (1%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           Q+     +F+ +   GL PD+F  N  ++ LCK G +  A      +      P+ VT++
Sbjct: 312 QWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYS 371

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            L++G  AEG +++   LF  +       +   +N LI+   +      A+ +F +M  E
Sbjct: 372 VLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQM-QE 430

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            G +  PD  TY ++I    + G +  A +   QM    + P+ I YNSLI GFC   + 
Sbjct: 431 RGVM--PDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNL 488

Query: 276 KEAKCLFIEMMDNGV-QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
            +AK L  EMM  G+ +P+ V FN++IN  CK+G++ +   + +L+I  G  PD +T+NS
Sbjct: 489 VKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNS 548

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L+DG+ LVG++ +A  +  +M+S G   DV +Y+ L++  C++ +++D + L+REMLS+ 
Sbjct: 549 LIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKG 608

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           ++P+ ITY  +L GLF  G    A K+  +M  +    D  T    + GLC+N    EA+
Sbjct: 609 VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAI 668

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +F+ +     +  I   N +I+ + K+ + + A +LF  +   G +P+  T   MI  L
Sbjct: 669 ALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNL 728

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
            KEG +++A+++   ME   C PS      ++R  ++  + SK    L K+   K +  +
Sbjct: 729 LKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDG-KTISLE 787

Query: 575 LSLSSKVVDLLSKDKKYRE 593
            S +S ++ L S+  KYRE
Sbjct: 788 ASTASLMLSLFSRKGKYRE 806



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 169/553 (30%), Positives = 276/553 (49%), Gaps = 33/553 (5%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS-- 78
            F  +  R P      SS   +DG S+A  L +R                C  + +P   
Sbjct: 77  GFLTALARAP------SSATCRDGPSLAVALFNR---------------ICREEARPRVA 115

Query: 79  -PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
            P + ++ IL+    +  +     +LF R    GL  D+ V N+L+ CLC    +  A  
Sbjct: 116 LPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVN 175

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           V+L R+      P+T++++ ++  LC + R   A  L   +      C PNVV++NT+I+
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  R      A  LF EM+ + G +  PDVVTY+S ID LCK   +DKA+ +L QM    
Sbjct: 236 GFFREGEVSKACNLFHEMMQQ-GVV--PDVVTYSSYIDALCKARAMDKAELVLRQMISNG 292

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             P+ +TYN +I G+  +  WKE   +F EM   G+ PD+ T N+ ++  CK GK  +  
Sbjct: 293 FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAA 352

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
              + M  +G  PD VTY+ L+ G+   G +     LF SM   G   D   YNILI+A 
Sbjct: 353 EFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAY 412

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K   +++A+ ++ +M    + P   TY T+++   ++G L DA+   ++M    + PD+
Sbjct: 413 GKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDT 472

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET--YNCLINGLCKMGRLKTACKLF 492
             + + I G C +G +++A ++   + + +   R  T  +N +IN LCK GR+  A  +F
Sbjct: 473 IVYNSLIQGFCMHGNLVKAKELISEMMS-RGIPRPNTVFFNSIINSLCKEGRVVEAQDIF 531

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             + H G  PDV+T +++I      G+M+KA  +L  M +    P  VT+  LL G+ +N
Sbjct: 532 DLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRN 591

Query: 553 NKKSKVVVLLHKM 565
            +    ++L  +M
Sbjct: 592 GRIDDGLILFREM 604



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 238/461 (51%), Gaps = 8/461 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S EA  FFD M      P + ++++LL   A       +++LF  +  NG+  D  V N+
Sbjct: 348 SKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNI 407

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+   K G+   A ++  ++      P+  T+  +I      GR+ +A   F ++    
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ + +N+LI G C   N + A +L  EM++    I +P+ V +NSII+ LCK+G V 
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSR--GIPRPNTVFFNSIINSLCKEGRVV 525

Query: 242 KAK---ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
           +A+   +L++ + +R   P+VIT+NSLI G+  V   ++A  +   M+  G++PDVVT++
Sbjct: 526 EAQDIFDLVIHIGER---PDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYS 582

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+++  C++G++D    L   M+ +GV P T+TY  ++ G    GR   A+++   M+  
Sbjct: 583 ALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   D+ +  I++   C++   ++A+ L++++ +  ++ ++   NT++  +++V    +A
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            +L D +    +VP++ T+   I  L K G V EA  +F  +    C       N +I  
Sbjct: 703 NELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRV 762

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           L + G +  A     ++  K    +  T S M+    ++G+
Sbjct: 763 LLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGK 803



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 197/418 (47%), Gaps = 6/418 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P V T+N L++  CR     V   LF   +       K DV+  N ++  LC     D A
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTG---LKTDVIVANILLKCLCHAKRSDDA 173

Query: 244 KELLL-QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM--DNGVQPDVVTFNAM 300
             +LL +M +  + P+ I+Y++++   C     + A  L   M+    G  P+VV++N +
Sbjct: 174 VNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTV 233

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+   ++G++ K   L   M+Q+GV PD VTY+S +D  C    + +A  +   M+S G 
Sbjct: 234 IHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGF 293

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D  +YN +I+      + ++   ++REM    + P + T N+ +S L + G   +A +
Sbjct: 294 EPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAE 353

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
             D M      PD  T++  + G    G+V++ + +F ++           YN LI+   
Sbjct: 354 FFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYG 413

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G +  A  +F ++Q +G +PD  T  T+I    + G++  A D    M A    P  +
Sbjct: 414 KRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTI 473

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            + +L++GF  +    K   L+ +M +  +   +    + +++ L K+ +  E  + F
Sbjct: 474 VYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIF 531


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/471 (32%), Positives = 259/471 (54%), Gaps = 6/471 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   S+T+++  L  +++ D  V+L + + ++G+  D+     LI  LC      GA  +
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           LG +  S   PN + ++ L+ G C  GR  + +++F++++    +P+V+ F   I+ LC+
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+K+ + MV       +P+VVTYN +I+ LCK+G V +A  L  +M D+ + P+
Sbjct: 233 KGRIGKAVKVKDIMVQRG---LEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPD 289

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMM--DNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           V+TYN+LI G   V +   A  L  EM+  D  V+PDVVTFN++I+  CK G+M +   +
Sbjct: 290 VVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISV 349

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
            E+M +RG   + VTYN L+ GF  V +++ A  L   ++S G   D ++Y+ILIN   K
Sbjct: 350 REMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSK 409

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             +V+ A    R M    IR  +  Y  LL+ L Q+G +  A+ L ++M +N  + D+  
Sbjct: 410 LWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL-DAVA 468

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++T + G CK+G +  A Q+ Q + +        TY+ LIN   K+G L+ A ++  ++ 
Sbjct: 469 YSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMA 528

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
             G +PDV    ++I     EGQ++K  DL+ +M AKN        CTL+R
Sbjct: 529 ASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTLVR 579



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/552 (29%), Positives = 270/552 (48%), Gaps = 16/552 (2%)

Query: 28  RPPNPKTDLSSHHFKDGTS-IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTI 86
           +P  P     +   + G +  A  LN R ++  +T  EA      +  ++ +    S+ I
Sbjct: 27  KPVRPAAPFLAVLLRRGRADAAALLNRRLRAAPVT--EACSLLSALPDVRDA---VSYNI 81

Query: 87  LLTMLAKN----KQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +L  L +     +Q  ++++   R       P+     +++  LC    T  A  +L  +
Sbjct: 82  VLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSM 141

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
             S    + VT+  LI GLC    +  A  L  ++      PNV+ ++ L+ G CR+   
Sbjct: 142 QASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRW 201

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
               K+FEEM +  G   +PDV+ +   ID LCK G + KA ++   M  R + PNV+TY
Sbjct: 202 QDVSKVFEEM-SRLG--VEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTY 258

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N LI   C     +EA  L  EM D GV PDVVT+N +I       +MD    LLE MIQ
Sbjct: 259 NVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQ 318

Query: 323 RG--VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
               V PD VT+NS++ G C +GR+ +A  +   M  +GC  ++ +YN LI    +  KV
Sbjct: 319 GDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKV 378

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
             A+ L  E++S  + P   TY+ L++G  ++  +  A   +  M    +  + F +   
Sbjct: 379 NMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPL 438

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           +  LC+ G + +A+ +F  + +  C L    Y+ ++ G CK G +K A +L   +  +G 
Sbjct: 439 LAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGL 497

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            PD VT S +I+   K G +++A  +L  M A   VP    F +L++G+    + +K++ 
Sbjct: 498 APDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILD 557

Query: 561 LLHKMAAEKLVV 572
           L+H+M A+ + +
Sbjct: 558 LIHEMRAKNVAI 569


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 170/534 (31%), Positives = 275/534 (51%), Gaps = 5/534 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD MIK + SP + +   +L +L         V +++ +   G+ P +   N L++  CK
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCK 246

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G       +L  + R    PN VT+N LINGL  +G   +A  L  ++       +  T
Sbjct: 247 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N LI G         AL L EEMV + GA   P V TYNS I GLCK G +  A + L 
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLK-GA--SPTVATYNSFIYGLCKLGRMSDAMQQLS 363

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M   N+ P+V++YN+LI G+C + +  +A  LF E+    + P +VT+N +++  C+ G
Sbjct: 364 DMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQG 423

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +++   +L   MI  G+ PD VTY  L++G C +G +S A+E F  M+ +G   D Y+Y 
Sbjct: 424 ELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYA 483

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
             I    K      A  L  EML++   P +I YN ++ GL ++GNL +A +L+ KM  +
Sbjct: 484 TRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSD 543

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V+PD  T+ + I    +NG + +  ++F  + +      + TY  LI+G    GRL+ A
Sbjct: 544 GVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERA 603

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
              F  +Q KG +P+V+T +++I+ LCK  +MD+A +   +M  K   P++ ++  L+  
Sbjct: 604 FIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINE 663

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
              N    +  + L+K   ++ V  D    S ++  L KD K  + + Q   LL
Sbjct: 664 NC-NMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL-QAVRQLESLL 715



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 249/485 (51%), Gaps = 4/485 (0%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +L+LLI    K  +      V  ++++S  +P+    N ++  L  +  + +A  +++ +
Sbjct: 166 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM 225

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
             F   P +VT+NTL++  C+       L L  EM       C P+ VTYN +I+GL K 
Sbjct: 226 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG---CAPNDVTYNVLINGLSKK 282

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G  ++AK L+ +M    +  +  TYN LI G+       EA  L  EM+  G  P V T+
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N+ I   CK G+M    + L  M+   + PD V+YN+L+ G+C +G + +A  LF  + S
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
                 + +YN L++  C+  ++E A  L  EM++E I P ++TY  L++G  ++G+L  
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A +  D+M    +  DS+ +AT I G  K G    A  + + +        +  YN +++
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           GLCK+G L+ A +L  ++   G IPD VT +++IH   + G++ K  ++  +M +K   P
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
           S VT+  L+ G     +  +  +   +M  EK ++ ++   + +++ L K ++  +  N 
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEM-QEKGILPNVITYNSLINGLCKVRRMDQAYNF 641

Query: 598 FRHLL 602
           F  ++
Sbjct: 642 FAEMV 646



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 238/485 (49%), Gaps = 3/485 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  +  M +    P + ++  LL    K  +    + L   +   G  P+    N+L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN L K G    A  ++G +L++    +  T+N LI G   +G + EA  L +++ +   
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P V T+N+ I GLC+      A++   +M+        PDVV+YN++I G C+ G + K
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDML---ANNLLPDVVSYNTLIYGYCRLGNLMK 392

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +++   + P ++TYN+L+ G C   + + A+ L +EM++ G+ PD+VT+  ++N
Sbjct: 393 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
            +CK G +       + M+  G+  D+  Y + + G   +G  SRA  L   M++KG   
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 512

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  YN++++  CK   +E+A  L ++M+S+ + P  +TY +++    + G L    ++ 
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M    + P   T+   I G    G +  A   F  ++       + TYN LINGLCK+
Sbjct: 573 YEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKV 632

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            R+  A   F  +  KG  P+  + + +I+  C  G   +A  L   M  +   P   T 
Sbjct: 633 RRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTH 692

Query: 543 CTLLR 547
             LL+
Sbjct: 693 SALLK 697



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 191/378 (50%), Gaps = 32/378 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+   + M+    SP + ++   +  L K  +    +     + +N L PD+   N LI
Sbjct: 322 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLI 381

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C++G    AF++   +      P  VT+N L++GLC +G +  A +L  ++      
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------------FGAICK---- 221
           P++VT+  L+NG C+  +  +A + F+EM++E                   G   +    
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501

Query: 222 ----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
                     PD++ YN ++DGLCK G +++A ELL +M    + P+ +TY S+I     
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
               ++ + +F EM+  G+ P VVT+  +I+ +   G++++       M ++G+ P+ +T
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YNSL++G C V R+ +A   F  MV KG   + YSY ILIN NC     ++A+ LY++ML
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML 681

Query: 392 SERIRPSVITYNTLLSGL 409
              ++P   T++ LL  L
Sbjct: 682 DRGVQPDSCTHSALLKQL 699


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 162/488 (33%), Positives = 257/488 (52%), Gaps = 6/488 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+     M K    P    +  L+  L+K  + +  + L + +   G  PD    N +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  LCK    + A  ++ R+L   F P+ +T+ +L+NGLC  GR+  A  LF ++     
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP---- 349

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P +V FNTLI+G         A  +  +MV  +G +  PDV TYNS+I G  K+G V  
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV--PDVCTYNSLIYGYWKEGLVGL 407

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+L  M+++   PNV +Y  L+ GFC +    EA  +  EM  +G++P+ V FN +I+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+ ++ +   +   M ++G  PD  T+NSL+ G C V  I  A  L   M+S+G   
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  +YN LINA  +  ++++A  L  EM+ +      ITYN+L+ GL + G +  A  L 
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           +KM  +   P + +    I+GLC++G V EAV+  + +        I T+N LINGLC+ 
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GR++    +F +LQ +G  PD VT +T++ WLCK G +  A  LL +      VP+  T+
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707

Query: 543 CTLLRGFV 550
             LL+  +
Sbjct: 708 SILLQSII 715



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 266/519 (51%), Gaps = 8/519 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   S+ ++L +L     +    ++F  + S  + P LF   +++   C +     A  
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  + +    PN+V +  LI+ L    R+ EA +L +++ +  C P+  TFN +I GLC
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +      A K+   M+    A   PD +TY  +++GLCK G VD AK+L  ++      P
Sbjct: 299 KFDRINEAAKMVNRMLIRGFA---PDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KP 351

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRL 316
            ++ +N+LI GF       +AK +  +M+ + G+ PDV T+N++I    K+G +     +
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L  M  +G  P+  +Y  L+DGFC +G+I  A  +   M + G + +   +N LI+A CK
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           + ++ +AV ++REM  +  +P V T+N+L+SGL +V  +  AL L+  M    VV ++ T
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + T I+   + G + EA ++   +      L   TYN LI GLC+ G +  A  LF ++ 
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G  P  ++C+ +I+ LC+ G +++A +   +M  +   P  VTF +L+ G  +  +  
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
             + +  K+ AE +    ++ ++ +  L      Y  CL
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/461 (32%), Positives = 238/461 (51%), Gaps = 8/461 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+   + M  M   P   +F  ++  L K  + +    +  R+   G  PD      L
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA-ARLFKKLNVFA 181
           +N LCK+G    A  +  RI +    P  V FN LI+G    GR+ +A A L   +  + 
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V T+N+LI G  +     +AL++  +M N+    CKP+V +Y  ++DG CK G +D
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG---CKPNVYSYTILVDGFCKLGKID 441

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  +L +M    + PN + +N LI  FC      EA  +F EM   G +PDV TFN++I
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C+  ++     LL  MI  GV  +TVTYN+L++ F   G I  AR+L   MV +G  
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YN LI   C+  +V+ A  L+ +ML +   PS I+ N L++GL + G + +A++ 
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF 621

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
             +M L    PD  TF + I+GLC+ G + + + +F+ ++         T+N L++ LCK
Sbjct: 622 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
            G +  AC L       G +P+  T S ++  +  +  +D+
Sbjct: 682 GGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 242/502 (48%), Gaps = 23/502 (4%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC---KMGITSGA--FVV 138
           + +L+  L  N ++ T+  L  ++   G+   +F  +L I+ +    K G        ++
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGI---VFKESLFISIMRDYDKAGFPGQTTRLML 170

Query: 139 LGRILRSC---FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             R + SC   F    V    L++G C +     AA +F  +      P + TF  ++  
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKA 226

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            C       AL L  +M       C P+ V Y ++I  L K   V++A +LL +M     
Sbjct: 227 FCAVNEIDSALSLLRDMTKHG---CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P+  T+N +I G C  D   EA  +   M+  G  PD +T+  ++N  CK G++D    
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGCRHDVYSYNILINAN 374
           L      R   P+ V +N+L+ GF   GR+  A+ +   MV S G   DV +YN LI   
Sbjct: 344 LF----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K+  V  A+ +  +M ++  +P+V +Y  L+ G  ++G + +A  ++++M  + + P++
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             F   I   CK   + EAV++F+ +    C+  + T+N LI+GLC++  +K A  L   
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  +G + + VT +T+I+   + G++ +A  L+ +M  +     E+T+ +L++G  +  +
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579

Query: 555 KSKVVVLLHKMAAEKLVVSDLS 576
             K   L  KM  +    S++S
Sbjct: 580 VDKARSLFEKMLRDGHAPSNIS 601



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 217/451 (48%), Gaps = 17/451 (3%)

Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL----VALKLF 209
           +  LI  L A G      RL  ++     D  +V   +L   + R  +         +L 
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMK----DEGIVFKESLFISIMRDYDKAGFPGQTTRLM 169

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            EM N +   C+P   +YN +++ L        A  +   M  R I P + T+  ++  F
Sbjct: 170 LEMRNVYS--CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAF 227

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C V++   A  L  +M  +G  P+ V +  +I+   K  ++++  +LLE M   G  PD 
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            T+N ++ G C   RI+ A ++   M+ +G   D  +Y  L+N  CK  +V+ A    ++
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KD 343

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN-DVVPDSFTFATYIDGLCKNG 448
           +     +P ++ +NTL+ G    G L DA  ++  M  +  +VPD  T+ + I G  K G
Sbjct: 344 LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            V  A++V   +RN  C+  + +Y  L++G CK+G++  A  + + +   G  P+ V  +
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +I   CKE ++ +A ++  +M  K C P   TF +L+ G  + ++    + LL  M +E
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523

Query: 569 KLVVSDLSLSSKVVDLLSKD--KKYRECLNQ 597
            +V + ++ ++ +   L +   K+ R+ +N+
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNE 554



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 141/272 (51%), Gaps = 5/272 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    F  L++   K  +    V +F+ +   G  PD++  N LI+ LC++     A  +
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 516

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP-NVVTFNTLINGLC 197
           L  ++      NTVT+N LIN     G I EA +L  ++ VF   P + +T+N+LI GLC
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM-VFQGSPLDEITYNSLIKGLC 575

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R      A  LFE+M+ +  A   P  ++ N +I+GLC+ G V++A E   +M  R   P
Sbjct: 576 RAGEVDKARSLFEKMLRDGHA---PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +++T+NSLI G C     ++   +F ++   G+ PD VTFN ++++ CK G +     LL
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           +  I+ G  P+  T++ L+        + R R
Sbjct: 693 DEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 160/499 (32%), Positives = 265/499 (53%), Gaps = 41/499 (8%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+++ P+P +  F  +L  L K   Y T +SLF++L  NG+                   
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGI------------------- 41

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
                            P+ VT   L+N  C  G I     +  K+     +PN +TF T
Sbjct: 42  ----------------KPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTT 85

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI G+C       AL LF + V   G   K D V+Y  +++GLCK G    A ++L   +
Sbjct: 86  LIKGMCLNGQAYEAL-LFHDHVVAHG--FKLDQVSYAILMNGLCKMGETRAAMQML---R 139

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              +N +V+ Y+++I   C      +A  L+ EM+  G+ P+V TF+ +++  CKD K  
Sbjct: 140 KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGK 199

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL +M+++GV P+ VTY ++MDG+CLV ++++A  +F  MV +G   +V+ YNI+I
Sbjct: 200 QAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIII 259

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N  CK ++V++A+ L++EM  ++I P V+TYN L+ GL ++G +  +L+L+D+M+     
Sbjct: 260 NGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKT 319

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            D  T+ + +  LCKN  + +A+ + + I++   +  + TY  LI+GLCK GRL+ A  +
Sbjct: 320 VDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVI 379

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F  +  +G    V T + MI+ LCK+G  D+A  LL  ME   C+P  V++ T++    +
Sbjct: 380 FQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSE 439

Query: 552 NNKKSKVVVLLHKMAAEKL 570
             +  K   LL  M    L
Sbjct: 440 KGETVKTNKLLCAMIVRGL 458



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 160/297 (53%), Gaps = 5/297 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   +  MI     P + +F+IL+  L K+++    ++L   +   G+ P++     ++
Sbjct: 165 DAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIM 224

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C +   + A  +   +++    PN   +N +INGLC + R+ EA  LFK+++    +
Sbjct: 225 DGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKIN 284

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP-DVVTYNSIIDGLCKDGFVDK 242
           P+VVT+N LI+GLC+      +L    E+V+E  +I K  D++TYNS++  LCK+  +D+
Sbjct: 285 PDVVTYNILIDGLCKLGKISTSL----ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQ 340

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L+ ++KD+ I PNV TY +LI G C     ++A  +F E++  G    V T+N MIN
Sbjct: 341 AITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMIN 400

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             CK G  D+   LL  M      PD V+Y +++      G   +  +L  +M+ +G
Sbjct: 401 GLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRG 457



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 181/381 (47%), Gaps = 39/381 (10%)

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P ++ +N ++     ++ +  A  LF ++  NG++P +VT   ++N  C  G +  +  +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L  +++ G  P+++T+ +L+ G CL G+   A      +V+ G + D  SY IL+N  CK
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             +   A+ + R+     +   V+ Y+T++  L +   + DA +L  +M    + P+ +T
Sbjct: 128 MGETRAAMQMLRKTW---VNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 437 FATYIDGLCK------------------------------NGFVL-----EAVQVFQAIR 461
           F+  +D LCK                              +G+ L     +A+ +F  + 
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               E  +  YN +INGLCK  R+  A  LF  +  K   PDVVT + +I  LCK G++ 
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIS 304

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            + +L+ +M +       +T+ +LL    +N+   + + L+ K   ++ +  ++   + +
Sbjct: 305 TSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLV-KEIKDQGIQPNVCTYTTL 363

Query: 582 VDLLSKDKKYRECLNQFRHLL 602
           +D L KD +  +    F+ +L
Sbjct: 364 IDGLCKDGRLEDAYVIFQEIL 384



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 115/204 (56%), Gaps = 3/204 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A+  F+ M++    P +  + I++  L K K+ D  ++LFK ++   + PD+   N+L
Sbjct: 234 NKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNIL 293

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK+G  S +  ++  +     T + +T+N L++ LC    + +A  L K++     
Sbjct: 294 IDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGI 353

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV T+ TLI+GLC+      A  +F+E++ E   I    V TYN +I+GLCK G  D+
Sbjct: 354 QPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHIT---VWTYNVMINGLCKKGLFDE 410

Query: 243 AKELLLQMKDRNINPNVITYNSLI 266
           A  LL +M+D    P+ ++Y ++I
Sbjct: 411 ALALLSRMEDNACIPDAVSYETII 434



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 106/279 (37%), Gaps = 68/279 (24%)

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           ML     P ++ +N +L+ L ++ +   A+ L  +++ N + P   T    ++  C  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLI--------------------------------- 476
           +     +   I     E    T+  LI                                 
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 477 --NGLCKMGRLKTA-----------------------CK---------LFHRLQHKGPIP 502
             NGLCKMG  + A                       CK         L+  +  KG  P
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP 180

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           +V T S ++  LCK+ +  +A +LL  M  K   P+ VT+  ++ G+   N+ +K + + 
Sbjct: 181 NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIF 240

Query: 563 HKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + M  E  V  ++   + +++ L K K+  E +N F+ +
Sbjct: 241 NVMVQEG-VEPNVWCYNIIINGLCKKKRVDEAMNLFKEM 278


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 247/471 (52%), Gaps = 3/471 (0%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           I++  L K  + +    L +     G  P++   N LI+  CK G    A  +   +   
Sbjct: 209 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 268

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
            F P   T+  +ING C +G      RL  ++N      NV  +NT+I+   +  + + A
Sbjct: 269 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 328

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
           ++  E M+ E G  CKPD+VTYN++I G C+DG V +A +LL Q   + + PN  +Y  L
Sbjct: 329 VETIEGMI-ECG--CKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPL 385

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I  +C    +  A    IEM + G +PD+VT+ A+++     G++D    + E M++RGV
Sbjct: 386 IHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGV 445

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD   YN LM G C   ++  A+ L   M+ +    D + Y  L++   ++  +++A  
Sbjct: 446 FPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARK 505

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L+   + + + P ++ YN ++ G  + G + DA+  I++M+   + PD FT++T IDG  
Sbjct: 506 LFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYV 565

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K   +  A ++F+ +   KC+  + TY  LING C+ G L  + K+F  +Q  G +P+VV
Sbjct: 566 KQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVV 625

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
           T S +I   CKE ++  A     +M    CVP++VTF  L+ GF +N  ++
Sbjct: 626 TYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRA 676



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 256/507 (50%), Gaps = 10/507 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFK-RLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           SP   + +I++   + +   +  + L+   L +   FPD+   N L+N L K+G    A 
Sbjct: 126 SPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIAR 185

Query: 137 VVLGRILRSCFTPNTVTFNF----LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
            +   +L      +    N+    ++ GLC EG++ E  +L +      C PN++ +NTL
Sbjct: 186 KLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTL 245

Query: 193 INGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           I+G C+  +  +A  LF E+ +  F     P V TY +II+G CK G       LL++M 
Sbjct: 246 IDGYCKKGDMEMANGLFIELKLKGF----LPTVETYGAIINGFCKKGDFKAIDRLLMEMN 301

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R +  NV  YN++I          +A      M++ G +PD+VT+N +I+ +C+DGK+ 
Sbjct: 302 SRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVS 361

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           + ++LLE  + +G+ P+  +Y  L+  +C  G   RA    + M  +G + D+ +Y  L+
Sbjct: 362 EADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALV 421

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +      +V+ A+ +  +ML   + P    YN L+SGL +   L  A  L+ +M    V+
Sbjct: 422 HGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVL 481

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD+F +AT +DG  +NG + EA ++F+          I  YN +I G CK G +K A   
Sbjct: 482 PDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMAC 541

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            +R++ +   PD  T ST+I    K+  +D A  +  +M    C P+ VT+ +L+ GF +
Sbjct: 542 INRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCR 601

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLS 578
                + + +  +M A  LV + ++ S
Sbjct: 602 KGDLHRSLKIFREMQACGLVPNVVTYS 628



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 237/498 (47%), Gaps = 52/498 (10%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  ++    K   +  +  L   +NS GL  ++ V N +I+   K G    A   
Sbjct: 272 PTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVET 331

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  ++     P+ VT+N LI+G C +G++ EA +L ++       PN  ++  LI+  C+
Sbjct: 332 IEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCK 391

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A     EM  E G   KPD+VTY +++ GL   G VD A  +  +M +R + P+
Sbjct: 392 QGGYDRASNWLIEMT-ERGH--KPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPD 448

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              YN L+ G C       AK L  EM+D  V PD   +  +++   ++G +D+  +L E
Sbjct: 449 AGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFE 508

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           L I++G+NP  V YN+++ G+C  G +  A      M  +    D ++Y+ +I+   K  
Sbjct: 509 LTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQH 568

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++ A  ++REM+  + +P+V+TY +L++G  + G+L  +LK+  +MQ   +VP+  T++
Sbjct: 569 DLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYS 628

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING-------------------- 478
             I   CK   +++A   F+ +   KC     T+N L+NG                    
Sbjct: 629 ILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENK 688

Query: 479 -----------------------------LCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
                                        LC+ G  +TA +L +++  KG IPD V+   
Sbjct: 689 QSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVA 748

Query: 510 MIHWLCKEGQMDKANDLL 527
           ++H +C EG+  +  +++
Sbjct: 749 LLHGVCLEGRSKEWKNIV 766



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 159/349 (45%), Gaps = 17/349 (4%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    + IL++ L K  +      L   +    + PD FV   L++   + G    A  +
Sbjct: 447 PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKL 506

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
               +     P  V +N +I G C  G + +A     ++      P+  T++T+I+G  +
Sbjct: 507 FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVK 566

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   A K+F EMV      CKP+VVTY S+I+G C+ G + ++ ++  +M+   + PN
Sbjct: 567 QHDLDGAQKMFREMVK---MKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPN 623

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM---DKVNR 315
           V+TY+ LI  FC      +A   F EM+ N   P+ VTFN ++N   K+G     +K N 
Sbjct: 624 VVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNE 683

Query: 316 LLE-----------LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
             E            MI  G  P +  YNS++   C  G    A +L   M SKGC  D 
Sbjct: 684 FQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDS 743

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            S+  L++  C + + ++   +    L+ER     + Y+++L      G
Sbjct: 744 VSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQG 792



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 183/376 (48%), Gaps = 8/376 (2%)

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKP-DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           L R R+  + LK F+ +    G    P +   Y+S++  L +     + + +L  M+   
Sbjct: 67  LDRIRDVELGLKFFDWVSR--GQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEE 124

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ-PDVVTFNAMINYNCKDGKMDKV 313
           ++P     + +I  +      ++A  L+  ++      PDV+  N+++N   K G+++  
Sbjct: 125 MSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIA 184

Query: 314 NRLLELMIQRGVNPDTVTYNS----LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
            +L + M++     D    N     ++ G C  G++   R+L      +GC  ++  YN 
Sbjct: 185 RKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNT 244

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+  CK   +E A  L+ E+  +   P+V TY  +++G  + G+     +L+ +M    
Sbjct: 245 LIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRG 304

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           +  +   + T ID   K+G +++AV+  + +  C C+  I TYN LI+G C+ G++  A 
Sbjct: 305 LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEAD 364

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           +L  +   KG +P+  + + +IH  CK+G  D+A++ L++M  +   P  VT+  L+ G 
Sbjct: 365 QLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGL 424

Query: 550 VQNNKKSKVVVLLHKM 565
           V   +    + +  KM
Sbjct: 425 VVAGEVDVALTIREKM 440



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 17/287 (5%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+     P    +  L+    +N   D    LF+     G+ P +   N +I   CK G+
Sbjct: 475 MLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGM 534

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A   + R+ +    P+  T++ +I+G   +  +  A ++F+++    C PNVVT+ +
Sbjct: 535 MKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTS 594

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LING CR  +   +LK+F EM    G +  P+VVTY+ +I   CK+  +  A     +M 
Sbjct: 595 LINGFCRKGDLHRSLKIFREM-QACGLV--PNVVTYSILIGSFCKEAKLIDAASFFEEML 651

Query: 252 DRNINPNVITYNSLICGFC---------CVDDWKEAKC-----LFIEMMDNGVQPDVVTF 297
                PN +T+N L+ GF            ++++E K       F  M+ +G  P    +
Sbjct: 652 MNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAY 711

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           N+++   C+ G      +L   M  +G  PD+V++ +L+ G CL GR
Sbjct: 712 NSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGR 758



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 150/331 (45%), Gaps = 20/331 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           ++GN+  +EA   F+  I+   +PG+  +  ++    K       ++   R+    L PD
Sbjct: 496 RNGNL--DEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPD 553

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            F  + +I+   K     GA  +   +++    PN VT+  LING C +G +  + ++F+
Sbjct: 554 EFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFR 613

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PNVVT++ LI   C+    + A   FEEM+      C P+ VT+N +++G  
Sbjct: 614 EMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMN---KCVPNDVTFNYLVNGFS 670

Query: 236 KDG----------FVDKAKELLLQMKDRNIN----PNVITYNSLICGFCCVDDWKEAKCL 281
           K+G          F +  + + L    R I+    P    YNS++   C    ++ A  L
Sbjct: 671 KNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQL 730

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             +M   G  PD V+F A+++  C +G+  +   ++   +        V Y+S++D +  
Sbjct: 731 SNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLP 790

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILIN 372
            G  S A  +  +M  +   H     NI ++
Sbjct: 791 QG-TSEASVILQTMFEECQSHSKVGDNIQVS 820


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 266/507 (52%), Gaps = 8/507 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P    T F ++  +  + +  D + ++   + S    P   + +++I   C+ G  S A 
Sbjct: 113 PPNAYTYFPVVRGLCGRGRIADAL-AVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSAL 171

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            VL  +     T +T   N +IN +C +G + E   + +KL +F C+ ++V++N ++ GL
Sbjct: 172 RVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGL 231

Query: 197 CRTRNTLVALKLFEEMVNEFGAI-------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           C  +      +L +EMV    A+       C PD+  Y +IIDG+CK+G  + A E+L +
Sbjct: 232 CAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSR 291

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M    + PNV+ YN+++ G C  D W++A+ L  EM       D VTFN ++++ C++G 
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGL 351

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+V  LLE M++ G  PD +TY ++++GFC  G I  A  L  +M S GC+ +  SY I
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTI 411

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           ++   C  ++  DA  L   M+ +   P+ +T+NT+++ L + G +  A++L+ +M +N 
Sbjct: 412 VLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG 471

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
             PD  +++T IDGL K G   EA+++   + N      + TY+ +   L + GR+    
Sbjct: 472 CNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVI 531

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++F  +Q      D V  + +I  LCK  + D A D L  M +  C+P+E T+  L++G 
Sbjct: 532 QMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGL 591

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLS 576
                  +   LL ++ + + V   L+
Sbjct: 592 ASEGLLCEAQDLLSELCSRRAVRKHLT 618



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 247/491 (50%), Gaps = 19/491 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M      P    + +++    ++  Y + + + + L++ G   D    NL+I
Sbjct: 134 DALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVI 193

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL---------- 173
           N +C  G       +L ++       + V++N ++ GLCA  R  +   L          
Sbjct: 194 NAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEA 253

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             ++    C P++  + T+I+G+C+  +  VA ++   M + +G   KP+VV YN+++ G
Sbjct: 254 LSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPS-YG--LKPNVVCYNTVLKG 310

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC---CVDDWKEAKCLFIEMMDNGV 290
           +C     +KA+ELL +M  +N   + +T+N L+  FC    VD   E   L  +M+++G 
Sbjct: 311 ICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIE---LLEQMLEHGC 367

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PDV+T+  +IN  CK+G +D+   LL+ M   G  P+T++Y  ++ G C   R   A E
Sbjct: 368 MPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEE 427

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           L   M+ +GC  +  ++N +IN  CK   VE A+ L ++ML     P +I+Y+T++ GL 
Sbjct: 428 LMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLG 487

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + G   +AL+L++ M    + P+  T+++    L + G + + +Q+F  I++        
Sbjct: 488 KAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAV 547

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            YN +I+ LCK      A      +   G +P+  T + +I  L  EG + +A DLL ++
Sbjct: 548 LYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607

Query: 531 EAKNCVPSEVT 541
            ++  V   +T
Sbjct: 608 CSRRAVRKHLT 618



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/481 (22%), Positives = 202/481 (41%), Gaps = 89/481 (18%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
            + LI  LC    T  A++  +   N  G      VV YN+++ G C+ G V+ A+ L  
Sbjct: 55  LSALIRSLCVAGRTADAVRALDAAGNAAG------VVDYNAMVAGYCRVGQVEAARRLAA 108

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            +    + PN  TY  ++ G C      +A  +  EM      P    ++ +I   C+ G
Sbjct: 109 AVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSG 165

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
                 R+LE +  +G   DT   N +++  C  G +    E+   +   GC  D+ SYN
Sbjct: 166 GYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYN 225

Query: 369 ILINANCKDQK-----------------------------------VEDAVC-------- 385
            ++   C  ++                                   + D +C        
Sbjct: 226 AVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVA 285

Query: 386 --LYREMLSERIRPSVITYNTLLSGL---------------------------------- 409
             +   M S  ++P+V+ YNT+L G+                                  
Sbjct: 286 NEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDF 345

Query: 410 -FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             Q G +   ++L+++M  +  +PD  T+ T I+G CK G + EAV + + + +C C+  
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
             +Y  ++ GLC   R   A +L  R+  +G +P+ VT +T+I++LCK+G +++A +LL 
Sbjct: 406 TISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLK 465

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            M    C P  +++ T++ G  +  K  + + LL+ M  + +  + ++ SS    L  + 
Sbjct: 466 QMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREG 525

Query: 589 K 589
           +
Sbjct: 526 R 526



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 135/264 (51%), Gaps = 4/264 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +  +   + M++    P + ++T ++    K    D  V L K + S G  P+     ++
Sbjct: 353 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIV 412

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC       A  ++ R+++    PN VTFN +IN LC +G + +A  L K++ V  C
Sbjct: 413 LKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGC 472

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P++++++T+I+GL +   T  AL+L   M+N+      P+V+TY+S+   L ++G +DK
Sbjct: 473 NPDLISYSTVIDGLGKAGKTEEALELLNVMINKG---ITPNVITYSSMAFALAREGRIDK 529

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
             ++   ++D  I  + + YN++I   C   +   A      M+ NG  P+  T+ A+I 
Sbjct: 530 VIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIK 589

Query: 303 YNCKDGKMDKVNRLL-ELMIQRGV 325
               +G + +   LL EL  +R V
Sbjct: 590 GLASEGLLCEAQDLLSELCSRRAV 613



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 2/135 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  ++   K+G   + EA+   + MI    +P + +++ +   LA+  + D V+ 
Sbjct: 475 DLISYSTVIDGLGKAGK--TEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQ 532

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +    +  D  + N +I+ LCK   T  A   L  ++ +   PN  T+  LI GL 
Sbjct: 533 MFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLA 592

Query: 163 AEGRIMEAARLFKKL 177
           +EG + EA  L  +L
Sbjct: 593 SEGLLCEAQDLLSEL 607


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 269/512 (52%), Gaps = 9/512 (1%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F+D M+    SP + +F +++  L    + D+  SL + +  +G  P+  +   LI+ LC
Sbjct: 193 FYD-MLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALC 251

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           +    S A  +L  +   C  P+  TFN +I+GLC  GRI EAA+L  ++ +     + +
Sbjct: 252 ENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDAL 311

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+  L++GLCR      A  L  ++ N       P+ V YN++I G    G  ++AK+LL
Sbjct: 312 TYGYLMHGLCRMGQVDEARALLNKIPN-------PNTVLYNTLISGYVASGRFEEAKDLL 364

Query: 248 L-QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
              M      P+  T+N +I G         A  L  EM+    +P+V+T+  +IN  CK
Sbjct: 365 YNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCK 424

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G++++   ++  M  +G++ +TV YN L+   C  G I  A +LF  M  KGC+ D+Y+
Sbjct: 425 QGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYT 484

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           +N LIN  CK+ K+E+A+ LY +M  E +  + +TYNTL+       ++  A KL+D+M 
Sbjct: 485 FNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEML 544

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                 D+ T+   I  LCK G V + + +F+ +        I + N LI+GLC+ G++ 
Sbjct: 545 FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVN 604

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A K    + H+G  PD+VT +++I+ LCK G + +A++L   ++++   P  +T+ TL+
Sbjct: 605 DALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
                    +   +LL+K      + ++++ S
Sbjct: 665 SRHCHEGMFNDACLLLYKGVDSGFIPNEVTWS 696



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 159/456 (34%), Positives = 246/456 (53%), Gaps = 8/456 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+   + M  M   P + +F  ++  L +  +      L  R+   G   D      L
Sbjct: 257 SEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYL 316

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLNVFA 181
           ++ LC+MG    A  +L +I      PNTV +N LI+G  A GR  EA  L +  + +  
Sbjct: 317 MHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAG 372

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +P+  TFN +I+GL +    + AL+L  EMV +     +P+V+TY  +I+G CK G ++
Sbjct: 373 YEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKR---FEPNVITYTILINGFCKQGRLE 429

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A E++  M  + ++ N + YN LIC  C   + +EA  LF EM   G +PD+ TFN++I
Sbjct: 430 EAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLI 489

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N  CK+ KM++   L   M   GV  +TVTYN+L+  F +   I +A +L   M+ +GC 
Sbjct: 490 NGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCP 549

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YN LI A CK   VE  + L+ EML + I P++I+ N L+SGL + G + DALK 
Sbjct: 550 LDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKF 609

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +  M    + PD  T+ + I+GLCK G V EA  +F  +++        TYN LI+  C 
Sbjct: 610 LQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCH 669

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
            G    AC L ++    G IP+ VT S +I+++ K+
Sbjct: 670 EGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 153/494 (30%), Positives = 258/494 (52%), Gaps = 10/494 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   S+ ++L +L          ++F  + S G+ P ++   +++  LC +     A  +
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  + +    PN+V +  LI+ LC   R+ EA +L + + +  C+P+V TFN +I+GLCR
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCR 287

Query: 199 TRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                 A KL + M+   F      D +TY  ++ GLC+ G VD+A+ LL ++     NP
Sbjct: 288 AGRIHEAAKLLDRMLLRGFST----DALTYGYLMHGLCRMGQVDEARALLNKIP----NP 339

Query: 258 NVITYNSLICGFCCVDDWKEAK-CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           N + YN+LI G+     ++EAK  L+  M+  G +PD  TFN MI+   K G +     L
Sbjct: 340 NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALEL 399

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L  M+ +   P+ +TY  L++GFC  GR+  A E+  SM +KG   +   YN LI A CK
Sbjct: 400 LNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCK 459

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           D  +E+A+ L+ EM  +  +P + T+N+L++GL +   + +AL L   M L  V+ ++ T
Sbjct: 460 DGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVT 519

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + T +        + +A ++   +    C L   TYN LI  LCK G ++    LF  + 
Sbjct: 520 YNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEML 579

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG  P +++C+ +I  LC+ G+++ A   L DM  +   P  VT+ +L+ G  +     
Sbjct: 580 GKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQ 639

Query: 557 KVVVLLHKMAAEKL 570
           +   L +K+ +E +
Sbjct: 640 EASNLFNKLQSEGI 653



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 249/515 (48%), Gaps = 26/515 (5%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI--L 143
           +L+  L     +  +  L K++   GL     +  L++    K G+   A  +L  +  +
Sbjct: 104 LLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGV 163

Query: 144 RSC---FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            SC   F    V  + L++G C   R+  A  +F  +      P V TF  ++  LC   
Sbjct: 164 YSCDPTFKSYNVVLDILVDGDCP--RV--APNVFYDMLSRGVSPTVYTFGVVMKALCMVS 219

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A  L  +M       C P+ V Y ++I  LC++  V +A +LL  M      P+V 
Sbjct: 220 EVDSACSLLRDMAKHG---CVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQ 276

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           T+N +I G C      EA  L   M+  G   D +T+  +++  C+ G++D+   LL   
Sbjct: 277 TFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALL--- 333

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRAREL-FVSMVSKGCRHDVYSYNILINANCKDQK 379
             +  NP+TV YN+L+ G+   GR   A++L + +MV  G   D Y++NI+I+   K   
Sbjct: 334 -NKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGY 392

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +  A+ L  EM+++R  P+VITY  L++G  + G L +A ++++ M    +  ++  +  
Sbjct: 393 LVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNC 452

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I  LCK+G + EA+Q+F  +    C+  I T+N LINGLCK  +++ A  L+H +  +G
Sbjct: 453 LICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG 512

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            I + VT +T++H       + +A  L+ +M  + C    +T+  L++   +     K +
Sbjct: 513 VIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGL 572

Query: 560 VLLHKMAAE---------KLVVSDLSLSSKVVDLL 585
            L  +M  +          +++S L  + KV D L
Sbjct: 573 GLFEEMLGKGIFPTIISCNILISGLCRTGKVNDAL 607



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 192/370 (51%), Gaps = 5/370 (1%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C P   +YN ++D L        A  +   M  R ++P V T+  ++   C V +   A 
Sbjct: 166 CDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSAC 225

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L  +M  +G  P+ V +  +I+  C++ ++ +  +LLE M      PD  T+N ++ G 
Sbjct: 226 SLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGL 285

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  GRI  A +L   M+ +G   D  +Y  L++  C+  +V++A    R +L++   P+ 
Sbjct: 286 CRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEA----RALLNKIPNPNT 341

Query: 400 ITYNTLLSGLFQVGNLGDALKLI-DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           + YNTL+SG    G   +A  L+ + M +    PD++TF   IDGL K G+++ A+++  
Sbjct: 342 VLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLN 401

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +   + E  + TY  LING CK GRL+ A ++ + +  KG   + V  + +I  LCK+G
Sbjct: 402 EMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDG 461

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +++A  L  +M  K C P   TF +L+ G  +N+K  + + L H M  E ++ + ++ +
Sbjct: 462 NIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYN 521

Query: 579 SKVVDLLSKD 588
           + V   L +D
Sbjct: 522 TLVHAFLMRD 531


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 157/478 (32%), Positives = 253/478 (52%), Gaps = 3/478 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD MIK + SP + +   +L +L         V +++ +   G+ P +   N L++  CK
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCK 246

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G       +L  + R    PN VT+N LINGL  +G   +A  L  ++       +  T
Sbjct: 247 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N LI G         AL L EEMV + GA   P V TYNS I GLCK G +  A + L 
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLK-GA--SPTVATYNSFIYGLCKLGRMSDAMQQLS 363

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M   N+ P+V++YN+LI G+C + +  +A  LF E+    + P +VT+N +++  C+ G
Sbjct: 364 DMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQG 423

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +++   +L   MI  G+ PD VTY  L++G C +G +S A+E F  M+ +G   D Y+Y 
Sbjct: 424 ELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYA 483

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
             I    K      A  L  EML++   P +I YN ++ GL ++GNL +A +L+ KM  +
Sbjct: 484 TRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSD 543

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V+PD  T+ + I    +NG + +  ++F  + +      + TY  LI+G    GRL+ A
Sbjct: 544 GVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERA 603

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
              F  +Q KG +P+V+T +++I+ LCK  +MD+A +   +M  K   P++ ++  L+
Sbjct: 604 FIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 249/485 (51%), Gaps = 4/485 (0%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +L+LLI    K  +      V  ++++S  +P+    N ++  L  +  + +A  +++ +
Sbjct: 166 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM 225

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
             F   P +VT+NTL++  C+       L L  EM       C P+ VTYN +I+GL K 
Sbjct: 226 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG---CAPNDVTYNVLINGLSKK 282

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G  ++AK L+ +M    +  +  TYN LI G+       EA  L  EM+  G  P V T+
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N+ I   CK G+M    + L  M+   + PD V+YN+L+ G+C +G + +A  LF  + S
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
                 + +YN L++  C+  ++E A  L  EM++E I P ++TY  L++G  ++G+L  
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A +  D+M    +  DS+ +AT I G  K G    A  + + +        +  YN +++
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           GLCK+G L+ A +L  ++   G IPD VT +++IH   + G++ K  ++  +M +K   P
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
           S VT+  L+ G     +  +  +   +M  EK ++ ++   + +++ L K ++  +  N 
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEM-QEKGILPNVITYNSLINGLCKVRRMDQAYNF 641

Query: 598 FRHLL 602
           F  ++
Sbjct: 642 FAEMV 646



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 238/485 (49%), Gaps = 3/485 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  +  M +    P + ++  LL    K  +    + L   +   G  P+    N+L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN L K G    A  ++G +L++    +  T+N LI G   +G + EA  L +++ +   
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P V T+N+ I GLC+      A++   +M+        PDVV+YN++I G C+ G + K
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDML---ANNLLPDVVSYNTLIYGYCRLGNLMK 392

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +++   + P ++TYN+L+ G C   + + A+ L +EM++ G+ PD+VT+  ++N
Sbjct: 393 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
            +CK G +       + M+  G+  D+  Y + + G   +G  SRA  L   M++KG   
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 512

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  YN++++  CK   +E+A  L ++M+S+ + P  +TY +++    + G L    ++ 
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M    + P   T+   I G    G +  A   F  ++       + TYN LINGLCK+
Sbjct: 573 YEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKV 632

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            R+  A   F  +  KG  P+  + + +I+  C  G   +A  L   M  +   P   T 
Sbjct: 633 RRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTH 692

Query: 543 CTLLR 547
             LL+
Sbjct: 693 SALLK 697



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 191/378 (50%), Gaps = 32/378 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+   + M+    SP + ++   +  L K  +    +     + +N L PD+   N LI
Sbjct: 322 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLI 381

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C++G    AF++   +      P  VT+N L++GLC +G +  A +L  ++      
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------------FGAICK---- 221
           P++VT+  L+NG C+  +  +A + F+EM++E                   G   +    
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501

Query: 222 ----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
                     PD++ YN ++DGLCK G +++A ELL +M    + P+ +TY S+I     
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
               ++ + +F EM+  G+ P VVT+  +I+ +   G++++       M ++G+ P+ +T
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YNSL++G C V R+ +A   F  MV KG   + YSY ILIN NC     ++A+ LY++ML
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML 681

Query: 392 SERIRPSVITYNTLLSGL 409
              ++P   T++ LL  L
Sbjct: 682 DRGVQPDSCTHSALLKQL 699



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 186/390 (47%), Gaps = 11/390 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   FD +  +   P + ++  LL  L +  + +    L   + + G+ PD+    +L+
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 451

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  CKMG  S A      +L      ++  +   I G    G    A  L +++      
Sbjct: 452 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFP 511

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+++ +N +++GLC+  N   A +L ++MV++ G I  PD VTY SII    ++G + K 
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSD-GVI--PDYVTYTSIIHAHLENGRLRKG 568

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +E+  +M  + + P+V+TY  LI G       + A   F EM + G+ P+V+T+N++IN 
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLING 628

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK  +MD+       M+++G+ P+  +Y  L++  C +G    A  L+  M+ +G + D
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIR--PSVITYNTLLSGLFQVGNLGDALKL 421
             +++ L+    KD K++ AV     M + ++      +   T L+ +  +   G     
Sbjct: 689 SCTHSALLKQLGKDCKLQ-AVHGTSTMPTAKVDLLSQTVGAATALTSVSSIAENGH---- 743

Query: 422 IDKMQLNDVVPDSFTFA-TYIDGLCKNGFV 450
           I K QL   +P    F   Y  GL   G V
Sbjct: 744 ITKEQLRQNIPTKKQFVDPYRQGLIVEGGV 773


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 161/527 (30%), Positives = 266/527 (50%), Gaps = 7/527 (1%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN-CLCKMGITSGAFVVL 139
           +  F   LT L K  Q+ T ++LF +   N       +   +I  C   +G  S +F + 
Sbjct: 36  LAHFNKHLTCLMKTNQHSTAIALFNQNEYNNFITPCIITLTIIITCFFHLGHVSFSFSIF 95

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
           G+IL+  +  +TV  N ++ GLC  G +++A     ++       N V++  LINGLC  
Sbjct: 96  GKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCEN 155

Query: 200 RNTLVALKLFEEMVNEF-----GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
                A+ L   +  E      G   K +VV Y+ +ID LC++GFVD+  E   +M    
Sbjct: 156 GRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNG 215

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TY SLI G C V  + E   L  EM+  G+   V  F  +I+  CK+G + +  
Sbjct: 216 VCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAR 275

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + M+ RG  P+ VT  +LM G+CL G +  ARELF ++   G + DV++YN+ I+  
Sbjct: 276 EMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGY 335

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK  +V DAV ++ EM  E + P+++TYN+L+  L + G +  A +++  M  + + PD 
Sbjct: 336 CKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDI 395

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T    +DGLCK+  + +A+ +F  +        + +Y  LI+G C   R+  A  L   
Sbjct: 396 VTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRD 455

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  K  +P +VT S +I  LC+ G++  A  LL +M  K  +P  +T+  LL    +   
Sbjct: 456 MHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQH 515

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             + V L ++M    L   D+   + ++D   K ++  E +N FR +
Sbjct: 516 LDEAVFLFNQMIKRGL-EPDVMCYTIMIDGYCKSERIDEAINLFREM 561



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 250/464 (53%), Gaps = 11/464 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS------NGLF--PD 115
           +A+ F D ++    S    S+ IL+  L +N + +  V+L + +        +G F   +
Sbjct: 125 KALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGN 184

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           + + +++I+CLC+ G     F     ++ +   PN  T+  LI GLC  G+ +E   L  
Sbjct: 185 VVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVD 244

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++     D +V  F  LI+GLC+    + A ++F+EMVN      +P++VT  +++ G C
Sbjct: 245 EMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG---YEPNIVTCTALMGGYC 301

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
             G VD A+EL   + +     +V TYN  I G+C V   ++A  +F EM   GV P++V
Sbjct: 302 LKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIV 361

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N++I+  CK G++     +++ M + G+ PD VT   L+DG C   R+ +A  LF  +
Sbjct: 362 TYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQL 421

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V  G   DV+SY ILI+  C  +++ +A+ L R+M  + + P ++TY+ L+ GL + G +
Sbjct: 422 VESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRI 481

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A +L+++M +   +PD+ T++  +D L K   + EAV +F  +     E  +  Y  +
Sbjct: 482 SNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIM 541

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           I+G CK  R+  A  LF  +  K  +PD+VT + + + + K G 
Sbjct: 542 IDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 219/444 (49%), Gaps = 6/444 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E   F++ M+     P   ++  L+  L    ++     L   +   GL   ++V  +L
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G+   A  +   ++   + PN VT   L+ G C +G +  A  LF  +  +  
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +V T+N  I+G C+      A+++F+EM  E G +  P++VTYNS+ID LCK G V  
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCRE-GVV--PNIVTYNSLIDCLCKAGEVSG 378

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E++  M    + P+++T   L+ G C      +A  LF +++++G+ PDV ++  +I+
Sbjct: 379 AWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIH 438

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   +M +   LL  M  + + P  VTY+ L+DG C  GRIS A  L   M  KG   
Sbjct: 439 GCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLP 498

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +Y+IL++A  K Q +++AV L+ +M+   + P V+ Y  ++ G  +   + +A+ L 
Sbjct: 499 DTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLF 558

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M + ++VPD  T+    + + K+G      +    IR+     R+  Y   +  LCK 
Sbjct: 559 REMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY---LAALCKS 615

Query: 483 GRLKTACKLFHRLQHKGPIPDVVT 506
             L   C       + G +   V+
Sbjct: 616 EHLDYKCLASEFASYAGSLQTSVS 639



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 235/508 (46%), Gaps = 23/508 (4%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           ++I++  L +N   D     +  +  NG+ P+ F    LI  LC +G     F ++  ++
Sbjct: 188 YSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMI 247

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R     +   F  LI+GLC  G ++EA  +F ++     +PN+VT   L+ G C   N  
Sbjct: 248 RRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVD 307

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           +A +LF+  + E+G   K DV TYN  I G CK G V  A  +  +M    + PN++TYN
Sbjct: 308 MARELFDA-IGEWGF--KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYN 364

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           SLI   C   +   A  +   M  +G+ PD+VT   +++  CK  ++D+   L   +++ 
Sbjct: 365 SLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVES 424

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD  +Y  L+ G C   R+  A  L   M  K     + +Y+ LI+  C+  ++ +A
Sbjct: 425 GLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNA 484

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EM  +   P  ITY+ LL  L++  +L +A+ L ++M    + PD   +   IDG
Sbjct: 485 WRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDG 544

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK+  + EA+ +F+ +        I TY  L N + K G      K  + ++   P P 
Sbjct: 545 YCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPR 604

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           V+     +  LCK   +D             C+ SE        G +Q +    +   + 
Sbjct: 605 VL---KYLAALCKSEHLD-----------YKCLASEFASYA---GSLQTSVSQHIKATME 647

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
            M    L +  + LS+   + L + KKY
Sbjct: 648 MMYMHCLAIHPVRLSN---NALIRGKKY 672


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 162/511 (31%), Positives = 264/511 (51%), Gaps = 4/511 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++ A   FD M++    P +T+F  L+  L K         LF ++   G+ P+LF  N+
Sbjct: 276 NDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNI 335

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            I  LCK G    A  +LG + R    P+ VT+N +I GLC + R++EA     K+    
Sbjct: 336 FIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGG 395

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +PN  T+N++I+G C+    + A ++ ++ V  F    KPD  TY S+++G C+DG  D
Sbjct: 396 FEPNDFTYNSIIDGYCKKGMVVDANRILKDAV--FKGF-KPDEFTYCSLVNGFCQDGDPD 452

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  +      + + P++I YN+LI G C       A  L  EM + G +PD+ T+N +I
Sbjct: 453 QAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLII 512

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N  CK G +   N L+   I +G  PD  TYN+L+DG+C   ++  A EL   M S+G  
Sbjct: 513 NGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMT 572

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            DV +YN L+N  CK  K E+ + +++ M  +   P++ITYNT++  L     + +A+ L
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDL 632

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNCLINGLC 480
           + +M+   + PD  +F T I G CK G +  A  +F+ + +         TYN +I+   
Sbjct: 633 LGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFS 692

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           +   +K A +LF  ++  G  PD  T   +I   CK G +++    LL+   K  +PS  
Sbjct: 693 EQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLT 752

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           TF  +L      +K  + V ++H M  + +V
Sbjct: 753 TFGRVLNCLCVEHKVQEAVGIIHLMVQKDIV 783



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 255/488 (52%), Gaps = 3/488 (0%)

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
            +  +    V  F+R++     P ++  N ++N L + G  + A  V  R+       + 
Sbjct: 166 GRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDV 225

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            T+   I   C  GR   A RL + + V  C  N V + T++ G     +   A +LF+E
Sbjct: 226 YTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDE 285

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M+     +C PDV T+N ++  LCK GFV +++ L  ++  R + PN+ T+N  I G C 
Sbjct: 286 MLE--CCLC-PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCK 342

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
                 A  L   +   G++PDVVT+N +I   C+  ++ +    L  M+  G  P+  T
Sbjct: 343 EGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFT 402

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YNS++DG+C  G +  A  +    V KG + D ++Y  L+N  C+D   + A+ ++++ L
Sbjct: 403 YNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL 462

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
            + +RPS+I YNTL+ GL Q G +  AL+L+++M      PD +T+   I+GLCK G + 
Sbjct: 463 GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLS 522

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A  +        C   I TYN L++G C+  +L +A +L +R+  +G  PDV+T +T++
Sbjct: 523 DANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL 582

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           + LCK  + ++  ++   M  K C P+ +T+ T++     + K ++ V LL +M ++ L 
Sbjct: 583 NGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLT 642

Query: 572 VSDLSLSS 579
              +S  +
Sbjct: 643 PDVVSFGT 650



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/526 (29%), Positives = 259/526 (49%), Gaps = 39/526 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EAV  F+ M      P + S+  ++ +L +   ++    ++ R+    +  D++   + 
Sbjct: 172 QEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIR 231

Query: 123 INCLCKMGITSGAF--------------------VVLG---------------RILRSCF 147
           I   C+ G    A                     VV G                +L  C 
Sbjct: 232 IKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCL 291

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+  TFN L++ LC +G ++E+ RLF K+      PN+ TFN  I GLC+  +   A++
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L   +  E     +PDVVTYN++I GLC+   V +A+E L +M +    PN  TYNS+I 
Sbjct: 352 LLGCVSREG---LRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIID 408

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G+C      +A  +  + +  G +PD  T+ +++N  C+DG  D+   + +  + +G+ P
Sbjct: 409 GYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRP 468

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             + YN+L+ G C  G I  A +L   M  KGC+ D+++YN++IN  CK   + DA  L 
Sbjct: 469 SIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLI 528

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            + +++   P + TYNTL+ G  +   L  A++L+++M    + PD  T+ T ++GLCK 
Sbjct: 529 GDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKT 588

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
               E +++F+A+    C   I TYN +I  LC   ++  A  L   ++ KG  PDVV+ 
Sbjct: 589 AKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSF 648

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVP-SEVTFCTLLRGFVQN 552
            T+I   CK G +D A  L   ME +  V  +  T+  ++  F + 
Sbjct: 649 GTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQ 694



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 258/499 (51%), Gaps = 6/499 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D T+  K ++   K G +  +E +  FD ++K    P + +F I +  L K    D  V 
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERL--FDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L   ++  GL PD+   N +I  LC+      A   L +++   F PN  T+N +I+G C
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 411

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            +G +++A R+ K        P+  T+ +L+NG C+  +   A+ +F++     G   +P
Sbjct: 412 KKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD---GLGKGLRP 468

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            ++ YN++I GLC+ G +  A +L+ +M ++   P++ TYN +I G C +    +A  L 
Sbjct: 469 SIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLI 528

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            + +  G  PD+ T+N +++  C+  K+D    L+  M  +G+ PD +TYN+L++G C  
Sbjct: 529 GDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKT 588

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            +     E+F +M  KGC  ++ +YN +I + C  +KV +AV L  EM S+ + P V+++
Sbjct: 589 AKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSF 648

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLN-DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
            TL++G  +VG+L  A  L   M+   DV   + T+   I    +   +  A+++F  ++
Sbjct: 649 GTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMK 708

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
              C+    TY  LI+G CK G +    K       KG IP + T   +++ LC E ++ 
Sbjct: 709 KNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQ 768

Query: 522 KANDLLLDMEAKNCVPSEV 540
           +A  ++  M  K+ VP  V
Sbjct: 769 EAVGIIHLMVQKDIVPDTV 787



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 232/448 (51%), Gaps = 4/448 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+  ++N ++N L   G   +A +++ ++     + +V T+   I   CRT     AL+L
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
              M    G  C  + V Y +++ G  + G  D+A+EL  +M +  + P+V T+N L+  
Sbjct: 248 LRNM-PVLG--CFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHA 304

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C      E++ LF +++  GV P++ TFN  I   CK+G +D+  RLL  + + G+ PD
Sbjct: 305 LCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPD 364

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            VTYN+++ G C   R+  A E    MV+ G   + ++YN +I+  CK   V DA  + +
Sbjct: 365 VVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILK 424

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           + + +  +P   TY +L++G  Q G+   A+ +        + P    + T I GLC+ G
Sbjct: 425 DAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQG 484

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            +L A+Q+   +    C+  I TYN +INGLCKMG L  A  L      KG IPD+ T +
Sbjct: 485 LILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYN 544

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T++   C++ ++D A +L+  M ++   P  +T+ TLL G  +  K  +V+ +   M  E
Sbjct: 545 TLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM-TE 603

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           K    ++   + +++ L   KK  E ++
Sbjct: 604 KGCAPNIITYNTIIESLCNSKKVNEAVD 631



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 174/331 (52%), Gaps = 6/331 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  +  L+  L +       + L   +   G  PD++  NL+IN LCKMG  S A  +
Sbjct: 468 PSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHL 527

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +G  +     P+  T+N L++G C + ++  A  L  ++      P+V+T+NTL+NGLC+
Sbjct: 528 IGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCK 587

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           T  +   +++F+ M  +    C P+++TYN+II+ LC    V++A +LL +MK + + P+
Sbjct: 588 TAKSEEVMEIFKAMTEKG---CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           V+++ +LI GFC V D   A  LF  M     V     T+N +I+   +   M    RL 
Sbjct: 645 VVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLF 704

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + G +PD  TY  L+DGFC  G +++  +  +  + KG    + ++  ++N  C +
Sbjct: 705 SEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVE 764

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            KV++AV +   M+ + I P   T NT+   
Sbjct: 765 HKVQEAVGIIHLMVQKDIVPD--TVNTIFEA 793



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 166/344 (48%), Gaps = 3/344 (0%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI--TYNSLICGFCCVDDWKEA 278
           K  + TY S++  L   G  ++ + LL +M+  N++  ++   Y   +  +      +EA
Sbjct: 116 KHTLFTYKSMLQKLGFHGKFNEMENLLSEMRS-NLDNTLLEGVYVEAMRFYGRKGKIQEA 174

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
              F  M      P V ++NA++N   + G  ++ +++   M  + V  D  TY   +  
Sbjct: 175 VDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKS 234

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           FC  GR   A  L  +M   GC  +  +Y  ++    +    + A  L+ EML   + P 
Sbjct: 235 FCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPD 294

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           V T+N L+  L + G + ++ +L DK+    V P+ FTF  +I GLCK G +  AV++  
Sbjct: 295 VTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLG 354

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +        + TYN +I GLC+  R+  A +  H++ + G  P+  T +++I   CK+G
Sbjct: 355 CVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKG 414

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
            +  AN +L D   K   P E T+C+L+ GF Q+    + + + 
Sbjct: 415 MVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVF 458



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 181/433 (41%), Gaps = 49/433 (11%)

Query: 156 FLINGLCA----EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           F  NG+CA    + R+ME  +   K      D   V    L+    RT+++     L   
Sbjct: 13  FKNNGICAAHGRKTRMMEKVQSMLKAKESGNDE--VWRARLMESELRTKSSFKNAILIAG 70

Query: 212 MVNEFGAICKPDVVTYNSIIDGLC---KDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             ++ G +      T   ++D  C   +D  +   +  L++   +     + TY S++  
Sbjct: 71  EDDDLGEVKMEGRRTDRDLVDVFCMKYEDVCIRNLQ--LIKKTKQGFKHTLFTYKSMLQK 128

Query: 269 FCCVDDWKEAKCLFIEMMDN--GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
                 + E + L  EM  N      + V   AM  Y  + GK+ +     E M     +
Sbjct: 129 LGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYG-RKGKIQEAVDTFERMDLFNCD 187

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P   +YN++M+     G  ++A ++++ M  K    DVY+Y I I + C+  +   A+ L
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            R M       + + Y T+++G ++ G+   A +L D+M    + PD             
Sbjct: 248 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPD------------- 294

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
                                 + T+N L++ LCK G +  + +LF ++  +G  P++ T
Sbjct: 295 ----------------------VTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFT 332

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            +  I  LCKEG +D+A  LL  +  +   P  VT+ T++ G  + ++  +    LHKM 
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMV 392

Query: 567 AEKLVVSDLSLSS 579
                 +D + +S
Sbjct: 393 NGGFEPNDFTYNS 405



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 7/281 (2%)

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK---GCRHDVYSYNILINANCKDQ 378
           ++G      TY S++      G+ +    L   M S         VY   +      +  
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYG--RKG 169

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K+++AV  +  M      PSV +YN +++ L + G    A K+  +M+   V  D +T+ 
Sbjct: 170 KIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYT 229

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I   C+ G    A+++ + +    C      Y  ++ G  + G    A +LF  +   
Sbjct: 230 IRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLEC 289

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
              PDV T + ++H LCK+G + ++  L   +  +   P+  TF   ++G  +     + 
Sbjct: 290 CLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRA 349

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK--KYRECLNQ 597
           V LL  ++ E L    ++ ++ +  L  K +  +  ECL++
Sbjct: 350 VRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHK 390


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 170/544 (31%), Positives = 273/544 (50%), Gaps = 48/544 (8%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L +L +  Q+   V LF+        P+ F    LI+ LCK G    A+ +L  +     
Sbjct: 5   LNLLVRAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P     N +I GLC  GR  +A   FK +    C P+++TFN L++ L ++     A +
Sbjct: 62  PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +FE M     + C P+VVTY ++I+GLCKDG +D+A ELL  M +    PNVITY+ L+ 
Sbjct: 122 IFESM--HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C      +   L  EM   G QPDV+ +N ++N  CK  ++D+   L++LMI+ G  P
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             VTYNSLM+ FC   ++ RA  L   M  +GC  DV +YN +I   C+D +++DA  L 
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299

Query: 388 REMLSERIRPSVITYNTLLSGLF----------------------QVG---NLG------ 416
           ++M++ R  P VITY+T++ GL                       Q G   N G      
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359

Query: 417 ----------DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
                      AL L+ +M  ++VVPD  +F+  I  LCK+  +  A ++F  +   +C+
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
                Y  LI+GL K G +  A ++F  L  +   P V T ++++  LC  G++++A  +
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIEEAVRM 478

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           +  M  K C P   ++  L+RG  + +   +   L   + A+   + ++ + + +V+ L 
Sbjct: 479 VEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAM-EVGVYNVLVNELC 537

Query: 587 KDKK 590
           K K+
Sbjct: 538 KKKR 541



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 151/451 (33%), Positives = 242/451 (53%), Gaps = 13/451 (2%)

Query: 56  KSGNITSNEAVYFFDCM-IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           KSG +   EA   F+ M    +  P + ++T ++  L K+ + D  + L   +N  G  P
Sbjct: 112 KSGRV--EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCP 169

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           ++   ++L+  LCK G T   F +L  + R  F P+ + +N L+NGLC   R+ EA  L 
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           + +    C P VVT+N+L+   CR++    A +L + M +E G  C PDV+ YN++I GL
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM-SERG--CPPDVINYNTVIAGL 286

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC---VD-DWK-EAKCLFIEMM-DN 288
           C+D  +D A+ LL QM      P+VITY+++I G C    VD DWK EA C  +EMM   
Sbjct: 287 CRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G  P+  T+  +I   C+  K  +   LL  MI   V PD  +++ ++   C    +  A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            ++F  M  + C+ +  +Y  LI+   K  +V+ AV ++ E++ E  RP V TYN++L G
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDG 465

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L  VG + +A+++++ M   +  PD  ++   I GLC+   V EA ++FQA+      + 
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
           +  YN L+N LCK  RL  A  + ++L   G
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 254/471 (53%), Gaps = 11/471 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLN-SNGLFPDLFVLNL 121
            +A+ +F  +   K +P + +F IL+  L K+ + +    +F+ ++ S+   P++     
Sbjct: 82  GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +IN LCK G    A  +L  +  +   PN +T++ L+ GLC  GR  +   L +++    
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V+ +NTL+NGLC++R    AL+L + M+    + C P VVTYNS+++  C+   VD
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR---SGCYPTVVTYNSLMELFCRSKQVD 258

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  L+  M +R   P+VI YN++I G C      +A+ L  +M+     PDV+T++ +I
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318

Query: 302 NYNCKDGKMDKVNRL------LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           +  CKD ++D   +L      LE+M Q G  P+  TY  +++G C   +  +A  L   M
Sbjct: 319 DGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +      D+ S++++I + CK   ++ A  ++  M     +P+ + Y  L+ GL + G +
Sbjct: 379 IDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEV 438

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             A+++ + M +    P   T+ + +DGLC  G + EAV++ + + + +C     +Y  L
Sbjct: 439 DKAVRVFELM-VESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL 497

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           I GLC++  ++ A +LF  ++ KG   +V   + +++ LCK+ ++  A+ +
Sbjct: 498 IRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGV 548


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 170/544 (31%), Positives = 273/544 (50%), Gaps = 48/544 (8%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L +L +  Q+   V LF+        P+ F    LI+ LCK G    A+ +L  +     
Sbjct: 5   LNLLVRAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P     N +I GLC  GR  +A   FK +    C P+++TFN L++ L ++     A +
Sbjct: 62  PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +FE M     + C P+VVTY ++I+GLCKDG +D+A ELL  M +    PNVITY+ L+ 
Sbjct: 122 IFESM--HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C      +   L  EM   G QPDV+ +N ++N  CK  ++D+   L++LMI+ G  P
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             VTYNSLM+ FC   ++ RA  L   M  +GC  DV +YN +I   C+D +++DA  L 
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299

Query: 388 REMLSERIRPSVITYNTLLSGLF----------------------QVG---NLG------ 416
           ++M++ R  P VITY+T++ GL                       Q G   N G      
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359

Query: 417 ----------DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
                      AL L+ +M  ++VVPD  +F+  I  LCK+  +  A ++F  +   +C+
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
                Y  LI+GL K G +  A ++F  L  +   P V T ++++  LC  G++++A  +
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIEEAVRM 478

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           +  M  K C P   ++  L+RG  + +   +   L   + A+   + ++ + + +V+ L 
Sbjct: 479 VEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAM-EVGVYNVLVNELC 537

Query: 587 KDKK 590
           K K+
Sbjct: 538 KKKR 541



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 151/451 (33%), Positives = 242/451 (53%), Gaps = 13/451 (2%)

Query: 56  KSGNITSNEAVYFFDCM-IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           KSG +   EA   F+ M    +  P + ++T ++  L K+ + D  + L   +N  G  P
Sbjct: 112 KSGRV--EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCP 169

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           ++   ++L+  LCK G T   F +L  + R  F P+ + +N L+NGLC   R+ EA  L 
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           + +    C P VVT+N+L+   CR++    A +L + M +E G  C PDV+ YN++I GL
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM-SERG--CPPDVINYNTVIAGL 286

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC---VD-DWK-EAKCLFIEMM-DN 288
           C+D  +D A+ LL QM      P+VITY+++I G C    VD DWK EA C  +EMM   
Sbjct: 287 CRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G  P+  T+  +I   C+  K  +   LL  MI   V PD  +++ ++   C    +  A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            ++F  M  + C+ +  +Y  LI+   K  +V+ AV ++ E++ E  RP V TYN++L G
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDG 465

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L  VG + +A+++++ M   +  PD  ++   I GLC+   V EA ++FQA+      + 
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
           +  YN L+N LCK  RL  A  + ++L   G
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 254/471 (53%), Gaps = 11/471 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLN-SNGLFPDLFVLNL 121
            +A+ +F  +   K +P + +F IL+  L K+ + +    +F+ ++ S+   P++     
Sbjct: 82  GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +IN LCK G    A  +L  +  +   PN +T++ L+ GLC  GR  +   L +++    
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V+ +NTL+NGLC++R    AL+L + M+    + C P VVTYNS+++  C+   VD
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR---SGCYPTVVTYNSLMELFCRSKQVD 258

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  L+  M +R   P+VI YN++I G C      +A+ L  +M+     PDV+T++ +I
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318

Query: 302 NYNCKDGKMDKVNRL------LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           +  CKD ++D   +L      LE+M Q G  P+  TY  +++G C   +  +A  L   M
Sbjct: 319 DGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +      D+ S++++I + CK   ++ A  ++  M     +P+ + Y  L+ GL + G +
Sbjct: 379 IDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEV 438

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             A+++ + M +    P   T+ + +DGLC  G + EAV++ + + + +C     +Y  L
Sbjct: 439 DKAVRVFELM-VESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL 497

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           I GLC++  ++ A +LF  ++ KG   +V   + +++ LCK+ ++  A+ +
Sbjct: 498 IRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGV 548


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 160/500 (32%), Positives = 261/500 (52%), Gaps = 3/500 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F   IK+       SF IL+       ++   + +  ++   G  PD    N +++ LCK
Sbjct: 185 FTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCK 244

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G  + A  +L  +      PN  TFN L+ G C  G + EAA + + ++  +  P+  T
Sbjct: 245 KGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWT 304

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N +I+G C+      A++L EEM N       PDVVTYN++I+G  + G  ++  +L+ 
Sbjct: 305 YNVMISGFCKQGRIAEAMRLREEMEN---LKLSPDVVTYNTLINGCFEHGSSEEGFKLIE 361

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M+ R + PN +TYN ++  F       E      +M ++G  PD+VT+N +I+++CK G
Sbjct: 362 EMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVG 421

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           KMD+  RL++ M ++G+  D VT N+++   C   ++  A +L  S   +G   D  SY 
Sbjct: 422 KMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYG 481

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI    K +K   A+ L+ EM  + I PS+ITYN++++GL Q+G    A+  +D++  +
Sbjct: 482 TLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLES 541

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            +VPD  T+ T I G C+ G V +A Q    +     +  + T N L+ GLCK G L+ A
Sbjct: 542 GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKA 601

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            KLF+    KG   D V+ +T+I  LCKE +  +A DLL +ME K   P   T+  +L G
Sbjct: 602 LKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGG 661

Query: 549 FVQNNKKSKVVVLLHKMAAE 568
                +       + K+A +
Sbjct: 662 LTDAGRMKDAEEFISKIAEK 681



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 155/514 (30%), Positives = 258/514 (50%), Gaps = 51/514 (9%)

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP--------NT 151
              +F R+   G+ P L   N L+N L +   +        R+ ++ FT         NT
Sbjct: 143 AAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSI-----RLSKAVFTDFIKIGVKINT 197

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR------------- 198
            +FN LI+G C E R  EA R+  K+  + C P+ +T+NT+++GLC+             
Sbjct: 198 NSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257

Query: 199 -----------TRNTLVA----LKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGF 239
                      T N LV     L   +E  N    + +    PD  TYN +I G CK G 
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           + +A  L  +M++  ++P+V+TYN+LI G       +E   L  EM   G++P+ VT+N 
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNV 377

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           M+ +  K GKMD+V++ +  M + G  PD VTYN+L+   C VG++  A  L   M  KG
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP---SVITYNTLLSGLFQVGNLG 416
            + D  + N ++ A C+++K+++A  L   + S R R      ++Y TL+ G F+     
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDL---LCSARRRGYFVDEVSYGTLIIGYFKHEKAS 494

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            AL+L D+M+  +++P   T+ + I GLC+ G   +A+     +          TYN +I
Sbjct: 495 QALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTII 554

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G C+ G+++ A +  +++  K   PDVVTC+T++  LCKEG ++KA  L     +K   
Sbjct: 555 HGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKD 614

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
              V++ T++    +  +  +   LL +M  +KL
Sbjct: 615 VDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKL 648



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 239/514 (46%), Gaps = 61/514 (11%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+     M      P   ++  +L  L K  + +    L   + + GLFP+    N+L+
Sbjct: 215 EAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILV 274

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C++G    A  V+  + ++   P+  T+N +I+G C +GRI EA RL +++      
Sbjct: 275 VGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLS 334

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VVT+NTLING     ++    KL EEM    G   KP+ VTYN ++    K G +D+ 
Sbjct: 335 PDVVTYNTLINGCFEHGSSEEGFKLIEEME---GRGMKPNSVTYNVMVKWFVKKGKMDEV 391

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            + + +M++    P+++TYN+LI   C V    EA  L  EM   G++ D VT N M+  
Sbjct: 392 DKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRA 451

Query: 304 NCKDGKMDKVN-----------------------------------RLLELMIQRGVNPD 328
            C++ K+D+ +                                   RL + M ++ + P 
Sbjct: 452 LCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPS 511

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +TYNS++ G C +G+ ++A +    ++  G   D  +YN +I+  C++ +VE A   + 
Sbjct: 512 IITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHN 571

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           +M+ +  +P V+T NTLL GL + G L  ALKL +         D+ ++ T I  LCK  
Sbjct: 572 KMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEK 631

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG--------- 499
              EA  + + +   K      TYN ++ GL   GR+K A +   ++  KG         
Sbjct: 632 RFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLEL 691

Query: 500 --------------PIPDVVTCSTMIHWLCKEGQ 519
                         P P+ +  S  I+ LC +G+
Sbjct: 692 GKRQDARTSEIPQEPHPNAIAYSNKINELCSQGR 725



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 222/440 (50%), Gaps = 35/440 (7%)

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
           SC   +    +  I    A GR  +AA++F ++      P ++T NTL+N L R  ++  
Sbjct: 118 SCLHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSH- 176

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           +++L + +  +F  I                                   +  N  ++N 
Sbjct: 177 SIRLSKAVFTDFIKI----------------------------------GVKINTNSFNI 202

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI G C  + + EA  +  +M D G  PD +T+N +++  CK G++++   LL  M  +G
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKG 262

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + P+  T+N L+ G C +G +  A  +   M       D ++YN++I+  CK  ++ +A+
Sbjct: 263 LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM 322

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L  EM + ++ P V+TYNTL++G F+ G+  +  KLI++M+   + P+S T+   +   
Sbjct: 323 RLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWF 382

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K G + E  +  + +    C   I TYN LI+  CK+G++  A +L   +  KG   D 
Sbjct: 383 VKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDD 442

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           VT +TM+  LC+E ++D+A+DLL     +     EV++ TL+ G+ ++ K S+ + L  +
Sbjct: 443 VTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDE 502

Query: 565 MAAEKLVVSDLSLSSKVVDL 584
           M  ++++ S ++ +S +  L
Sbjct: 503 MKEKEIIPSIITYNSMIAGL 522


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 152/450 (33%), Positives = 246/450 (54%), Gaps = 6/450 (1%)

Query: 100 VVSLFKRLNSNGLF---PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNF 156
           V+ +F+++N++G F   P L   N ++  L K  +      V   +L +  +PN  TFN 
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           ++NG C  G ++EA     K+      P+  T+ +LI G CR +    A ++F  M  + 
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
              C+ + V+Y ++I GLC+ G +++A +L   M + N  P V TY  LI          
Sbjct: 260 ---CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           EA  LF EM + G +P+V T+  +I+  CK+ KMD+  ++L  M ++G+ P  VTYN+L+
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           DG+C  G I  A E+   M S  C  +  +YN LI   CK +KV  A+ L  +ML  ++ 
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           PS+ITYN+L+ G  +V +L  A +L+  M  N +VPD +T++ +ID LCK G V EA  +
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F +++    +     Y  LI+G CK+G++  A  L  R+ +   +P+  T + +I  LCK
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           E +M +A+ L+  M      P+ VT+  L+
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILI 586



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 245/499 (49%), Gaps = 5/499 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+   EA  +   +++    P   ++T L+    +NK  D    +F  +   G   +
Sbjct: 206 KIGNVV--EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRN 263

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 LI+ LC+ G  + A  +   +      P   T+  LI  L   GR +EA  LF 
Sbjct: 264 EVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++    C+PNV T+  LI+GLC+      A K+  EM +E G I  P VVTYN++IDG C
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM-SEKGLI--PSVVTYNALIDGYC 380

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G +D A E+L  M+  +  PN  TYN LICG C      +A  L  +M++  + P ++
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N++I+  CK   ++   RLL LM + G+ PD  TY+  +D  C  GR+  A  LF S+
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            +KG + +   Y  LI+  CK  K++ A  L   ML++   P+  TYN L+ GL +   +
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A  L+ KM    V P   T+   I  + K+G    A++VF  + +   +  + TY   
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           ++     G L+    +  ++  +G +PD+VT + +I    + G   +A D L  M    C
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680

Query: 536 VPSEVTFCTLLRGFVQNNK 554
            PS      L++     N+
Sbjct: 681 KPSLYIVSILIKNLSHENR 699



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 241/520 (46%), Gaps = 34/520 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           ++G I  NEA+  F  M +    P + ++T+L+  L+ + +    ++LF  +   G  P+
Sbjct: 276 EAGRI--NEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +    +LI+ LCK      A  +L  +      P+ VT+N LI+G C EG I +A  +  
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +   +C PN  T+N LI GLC+ R    A+ L  +M+        P ++TYNS+I G C
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK---LSPSLITYNSLIHGQC 450

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   ++ A  LL  M +  + P+  TY+  I   C     +EA  LF  +   GV+ + V
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            + A+I+  CK GK+D    LLE M+     P++ TYN L++G C   ++  A  L   M
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           ++ G +  V +Y ILI    KD   + A+ ++  M+S   +P V TY   L   F  G L
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML 630

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +   +I KM    ++PD  T+   IDG  + G    A    + + +  C+  +   + L
Sbjct: 631 EEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSIL 690

Query: 476 INGLCKMGRLKT-----------------------------ACKLFHRLQHKGPIPDVVT 506
           I  L    R+K                              A KLF ++   G   DV  
Sbjct: 691 IKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSI 750

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
              +I   C++ ++++A  L+  M+ +   PSE  + +LL
Sbjct: 751 YGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLL 790



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 248/534 (46%), Gaps = 34/534 (6%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           SG+    EA+  F+ M +    P + ++T+L+  L K  + D    +   ++  GL P +
Sbjct: 310 SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              N LI+  CK G+   AF +L  +  +   PNT T+N LI GLC + ++ +A  L  K
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P+++T+N+LI+G C+  +   A +L   ++NE G +  PD  TY+  ID LCK
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS-LMNENGLV--PDQWTYSVFIDTLCK 486

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +G V++A  L   +K + +  N + Y +LI G+C V     A  L   M+++   P+  T
Sbjct: 487 EGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYT 546

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I   CK+ KM + + L+  M+  GV P  VTY  L+      G    A ++F  MV
Sbjct: 547 YNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV 606

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           S G + DV +Y   ++A      +E+   +  +M  E I P ++TY  L+ G  ++G   
Sbjct: 607 SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTH 666

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE------------------------ 452
            A   +  M      P  +  +  I  L     + E                        
Sbjct: 667 RAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKT 726

Query: 453 -----AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
                A+++F+ +    C + +  Y  LI G C+  RL+ A  L H ++ +G  P     
Sbjct: 727 LEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY 786

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV--QNNKKSKVV 559
           ++++   CK G   +A  L+  M     +P   ++  L+ G     +N+K+K V
Sbjct: 787 NSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAV 840



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 226/439 (51%), Gaps = 36/439 (8%)

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           ++I   C   + L  L++F +M  +     KP +  YN+I+  L K   +D+ K + L++
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
            +  I+PN+ T+N+++ G+C + +  EA+    +++  G+ PD  T+ ++I  +C++  +
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGV 245

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS------------- 357
           D    +  +M Q+G   + V+Y +L+ G C  GRI+ A +LF  M               
Sbjct: 246 DNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305

Query: 358 ----------------------KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
                                 KGC  +V++Y +LI+  CK+ K+++A  +  EM  + +
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            PSV+TYN L+ G  + G + DA +++D M+ N   P++ T+   I GLCK   V +A+ 
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +   +   K    + TYN LI+G CK+  L++A +L   +   G +PD  T S  I  LC
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLC 485

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           KEG++++A  L   ++AK    +EV +  L+ G+ +  K      LL +M  +  + +  
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545

Query: 576 SLSSKVVDLLSKDKKYREC 594
           + +  +++ L K+KK +E 
Sbjct: 546 TYNV-LIEGLCKEKKMKEA 563



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 241/533 (45%), Gaps = 35/533 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  ++A    D M      P   ++  L+  L K ++    ++L  ++    L P 
Sbjct: 381 KEGMI--DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           L   N LI+  CK+     A+ +L  +  +   P+  T++  I+ LC EGR+ EA  LF 
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +       N V +  LI+G C+     VA  L E M+N+    C P+  TYN +I+GLC
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND---ACLPNSYTYNVLIEGLC 555

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+  + +A  L+ +M    + P V+TY  LI        +  A  +F  M+  G QPDV 
Sbjct: 556 KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+ A ++     G +++V+ ++  M + G+ PD VTY  L+DG+  +G   RA +    M
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675

Query: 356 VSKGCRHDVYSYNILI----------------------NANCKD-------QKVEDAVCL 386
           V  GC+  +Y  +ILI                      N N  D        + E A+ L
Sbjct: 676 VDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKL 735

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + +M+       V  Y  L++G  Q   L +A  L+  M+   + P    + + +D  CK
Sbjct: 736 FEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCK 795

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G   EAV++  A+        +E+Y  L+ GL   G  + A  +FH L   G   D V 
Sbjct: 796 LGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVA 855

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVP-SEVTFCTLLRGFVQNNKKSKV 558
              +I  L K   +D+ ++L+  ME K+    +++    L+R    N+ K  +
Sbjct: 856 WKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTKGAL 908



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 58/273 (21%)

Query: 359 GCRHDVYSY----NILINAN----------------CKDQKVEDAVCLYREM-------- 390
           G +H+V+SY    NILI A                 C  + V   + ++R+M        
Sbjct: 96  GFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKF 155

Query: 391 ------------------------------LSERIRPSVITYNTLLSGLFQVGNLGDALK 420
                                         L+ +I P++ T+N +++G  ++GN+ +A  
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
              K+    + PD+FT+ + I G C+N  V  A +VF  +    C+    +Y  LI+GLC
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + GR+  A KLF  +      P V T + +I+ L   G+  +A +L  +M+ K C P+  
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           T+  L+ G  + NK  +   +L +M+ + L+ S
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/528 (31%), Positives = 269/528 (50%), Gaps = 42/528 (7%)

Query: 63  NEAVYFFDCMIKMKPS--PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           +E++  F   ++  P+  P  +S   L+  L K K YD V+S+  ++ S  +FP    L+
Sbjct: 39  SESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLS 98

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
            LI         S AF VLG I++  F  N   FN L+ G C  G   +A  LF  +   
Sbjct: 99  ALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRN 158

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+ V++NT+INGLC+ +  + A +LF+EM    G  CKP+ VT++++IDG CK+G V
Sbjct: 159 CLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK---GGECKPNSVTFSALIDGFCKNGDV 215

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           ++   LL +M+   +  +V  Y++LI GFC   D +  K LF EM+   V P+VVT++ +
Sbjct: 216 EEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCL 275

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +N  CK  K  +  ++L+ M    V PD V Y  L DG    GR S A ++   MV +G 
Sbjct: 276 MNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE 335

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +  +YN +IN  CK+ +V+DA+ +   M  +  +P V+TY+TL+ GL  VG + +A+ 
Sbjct: 336 EPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVD 395

Query: 421 LIDKMQLND--VVPDSFTFATYIDGLCKN------------------------------- 447
           L++ +   +  + PD F F   I  LCK                                
Sbjct: 396 LLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDG 455

Query: 448 ----GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
               G + +A+++++   +        TY  LINGLCKM  L  A  LF++ +  G  P 
Sbjct: 456 YLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPT 515

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           V   +T++  LC+E  +++A +L  +M   N  P  V+F  ++ G ++
Sbjct: 516 VSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLK 563



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 242/485 (49%), Gaps = 5/485 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F  M   +  P   +F+ L+    KN   +    L + +   GL  D+FV + LI
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C  G       +   +LR   TPN VT++ L+N LC + +  EAA++   +      
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVR 301

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VV +  L +GL +      A+K+ + MV       +P+ VTYN+II+GLCK+G VD A
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE---EPNNVTYNAIINGLCKEGRVDDA 358

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN--GVQPDVVTFNAMI 301
             +L  M  +   P+V+TY++L+ G C V    EA  L   +M     ++PDV  FN +I
Sbjct: 359 LGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVI 418

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              CK  ++    R+   M++RG   + VTYN L+DG+   G++++A EL+   V  G  
Sbjct: 419 QELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGIS 478

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  +Y +LIN  CK Q +  A  L+ +  +   RP+V  YNTL++ L +  ++  A  L
Sbjct: 479 PNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNL 538

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
             +M+  +  PD  +F   IDG  K G V  A ++   + N        T++ LIN   K
Sbjct: 539 FQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLK 598

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
           +G+L  A  L+ R+   G +PD V   +++     +G+ +K   +L  M  K+ V     
Sbjct: 599 LGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKL 658

Query: 542 FCTLL 546
             T+L
Sbjct: 659 TSTIL 663



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 209/419 (49%), Gaps = 13/419 (3%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+  + N LI+ L           +  K+   +  P   + + LI     T+    A  +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 209 FEEMVNEFGAICKP----DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
                   G I K     +V  +N ++ G C+ G   KA +L   MK   + P+ ++YN+
Sbjct: 117 L-------GLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNT 169

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           +I G C      EAK LF EM     +P+ VTF+A+I+  CK+G +++   LLE M + G
Sbjct: 170 VINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMG 229

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           +  D   Y++L+ GFC  G I R +ELF  M+ K    +V +Y+ L+NA CK QK ++A 
Sbjct: 230 LEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAA 289

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            +   M   ++RP V+ Y  L  GL + G   DA+K++D M      P++ T+   I+GL
Sbjct: 290 QMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGL 349

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK--GPIP 502
           CK G V +A+ + + +     +  + TY+ L+ GLC +G++  A  L + L  K     P
Sbjct: 350 CKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKP 409

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           DV   + +I  LCK+ ++  A  +   M  +    + VT+  L+ G++   K +K + L
Sbjct: 410 DVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALEL 468



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 221/460 (48%), Gaps = 2/460 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            F+ M++   +P + +++ L+  L K +++     +   +    + PD+    +L + L 
Sbjct: 256 LFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLS 315

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G  S A  VL  +++    PN VT+N +INGLC EGR+ +A  + + +      P+VV
Sbjct: 316 KNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVV 375

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T++TL+ GLC       A+ L   ++++   I KPDV  +N +I  LCK   +  AK + 
Sbjct: 376 TYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHI-KPDVFAFNLVIQELCKQRRLRHAKRVY 434

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M +R    N++TYN LI G+       +A  L+ + +D+G+ P+  T+  +IN  CK 
Sbjct: 435 YTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKM 494

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             +     L       G  P    YN+LM   C    + +AR LF  M +     DV S+
Sbjct: 495 QMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSF 554

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           NI+I+   K   VE A  L  EML+  + P  IT++ L++   ++G L +A  L ++M  
Sbjct: 555 NIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVS 614

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
              VPD+  F + + G    G   + V + Q + +    L  +  + ++  LC M +   
Sbjct: 615 CGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVD 674

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
             K+  +      +   + C+ ++  L K    D AN L+
Sbjct: 675 IEKILPKFSQHTSVGASIKCNELLMKLNKV-HPDNANILV 713



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 180/374 (48%), Gaps = 1/374 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P   + N++ID L K    D    +  +M   ++ P   + ++LI  F        A  +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              +M  G   +V  FN ++   C+ G   K   L  +M +  + PD V+YN++++G C 
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             R+  A+ELF  M    C+ +  +++ LI+  CK+  VE+   L  EM    +   V  
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+ L+SG    G++    +L ++M   +V P+  T++  ++ LCK     EA Q+   + 
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
            CK    +  Y  L +GL K GR   A K+   +  +G  P+ VT + +I+ LCKEG++D
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVD 356

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH-KMAAEKLVVSDLSLSSK 580
            A  +L  M  K   P  VT+ TL++G     K  + V LL+  M+ E  +  D+   + 
Sbjct: 357 DALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNL 416

Query: 581 VVDLLSKDKKYREC 594
           V+  L K ++ R  
Sbjct: 417 VIQELCKQRRLRHA 430


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 173/561 (30%), Positives = 268/561 (47%), Gaps = 43/561 (7%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+     P +++F IL+  L +  Q    + L + +   GL PD      ++    + G 
Sbjct: 186 MVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGN 245

Query: 132 TSGA-------------------------FVVLGRI-----------LRSCFTPNTVTFN 155
             GA                         F   GRI           LR  F P+  TFN
Sbjct: 246 LDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFN 305

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            L+NGL   G +  A  +   +     DP++ T+N+LI+GLC+      A+K+  +M+  
Sbjct: 306 MLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER 365

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
               C P+ VTYN+II  LCK+  V++A +L L +  + I P+V TYNSLI G C   + 
Sbjct: 366 ---DCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNH 422

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
             A  L+ EM   G  PD  T+N +I+  C  GK+ +   LL+ M   G   + +TYN+L
Sbjct: 423 TVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTL 482

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +DGFC   RI+ A E+F  M  +G   +  +YN LI+  CK ++VE+A  L  +M+ E +
Sbjct: 483 IDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGL 542

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
           RP   TYN+LL+   + G++  A  ++  M  +   PD  T+ T I GLCK G V  A +
Sbjct: 543 RPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATK 602

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           + + I+     L    YN +I  L +  R K A +LF  +  K   PD VT   +   LC
Sbjct: 603 LLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLC 662

Query: 516 K-EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           +  G + +A D +++M  +  VP   +F  L  G         ++ L+  M  EK   SD
Sbjct: 663 QGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLI-DMVMEKAKFSD 721

Query: 575 LSLSSKVVDLLSKDKKYRECL 595
             ++  ++    K  KY++ L
Sbjct: 722 NEVT--MIRGFLKISKYQDAL 740



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 164/526 (31%), Positives = 271/526 (51%), Gaps = 15/526 (2%)

Query: 63  NEAVYFFDCM-IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           NE + F D M ++         +  LL +L    +   V      + S G+ PD+   N+
Sbjct: 141 NEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNI 200

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI  LC+      A +++  +      P+  TF  ++ G   EG +  A R+ +++    
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAG 260

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C    VT N L+NG C+      AL+  EEM    G    PD  T+N +++GL K G V 
Sbjct: 261 CVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFF--PDKYTFNMLVNGLSKTGHVK 318

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A E++  M     +P++ TYNSLI G C + +  EA  +  +M++    P+ VT+N +I
Sbjct: 319 HALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTII 378

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK+ ++++  +L  ++  +G+ PD  TYNSL+ G CL    + A EL+  M +KGC 
Sbjct: 379 STLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCH 438

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D ++YN+LI++ C   K+++A+ L +EM       +VITYNTL+ G  +   + +A ++
Sbjct: 439 PDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEI 498

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ-----VFQAIRNCKCELRIETYNCLI 476
            D+M+L  V  +S T+ T IDGLCK+  V EA Q     + + +R  K      TYN L+
Sbjct: 499 FDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKF-----TYNSLL 553

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
              CK G +K A  +   +   G  PD+VT  T+I  LCK G+++ A  LL  ++ K   
Sbjct: 554 TYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGIN 613

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
            +   +  +++   +  K+SK  V L +   EK    D +++ K+V
Sbjct: 614 LTPHAYNPVIQALFR-RKRSKEAVRLFREMIEKAEAPD-AVTYKIV 657



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 204/455 (44%), Gaps = 41/455 (9%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T   L++ L R  ++   + LF     +     KP    +  ++  L K G  D  
Sbjct: 52  PNF-TPTQLLHSLRREEDSSAVIHLFYWASKQ--PNFKPSSSIFKEVLHKLGKAGEFDAM 108

Query: 244 KELLLQMK------------------------------------DRNINPNVITYNSLIC 267
           K++L +MK                                    +  +  N   YN L+ 
Sbjct: 109 KDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLN 168

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                +  K  +     M+  G++PDV TFN +I   C+  ++     L+E M   G+ P
Sbjct: 169 VLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLP 228

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  T+ ++M GF   G +  A  +   MV  GC     + N+L+N  CK+ ++E+A+   
Sbjct: 229 DEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFI 288

Query: 388 REM-LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            EM L E   P   T+N L++GL + G++  AL+++D M      PD +T+ + I GLCK
Sbjct: 289 EEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCK 348

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G V EAV+V   +    C     TYN +I+ LCK  +++ A KL   L  KG +PDV T
Sbjct: 349 LGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCT 408

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            +++I  LC       A +L  +M+ K C P E T+  L+       K  + + LL +M 
Sbjct: 409 YNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEME 468

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                 + ++ ++ ++D   K+K+  E    F  +
Sbjct: 469 VSGCARNVITYNT-LIDGFCKNKRIAEAEEIFDQM 502



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 4/207 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   FD M     S    ++  L+  L K+++ +    L  ++   GL PD F  N L+
Sbjct: 494 EAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLL 553

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CK G    A  ++  +      P+ VT+  LI GLC  GR+  A +L + + +   +
Sbjct: 554 TYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGIN 613

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF-VDK 242
                +N +I  L R + +  A++LF EM+ +  A   PD VTY  +  GLC+ G  + +
Sbjct: 614 LTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEA---PDAVTYKIVFRGLCQGGGPIGE 670

Query: 243 AKELLLQMKDRNINPNVITYNSLICGF 269
           A + +++M +R   P   ++  L  G 
Sbjct: 671 AVDFVMEMLERGYVPEFSSFYMLAEGL 697


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 162/589 (27%), Positives = 287/589 (48%), Gaps = 38/589 (6%)

Query: 30  PNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK------------- 76
           PNPK     HH     +       R +S N+  N A      +I  +             
Sbjct: 17  PNPK----PHHLAAAAAT------RPESPNVAPNPASARLRRLIAREDLAGAARLVELSA 66

Query: 77  ----PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
                +P +   T L+  L +  +      + +    +G   D+F  N L+   C+ G  
Sbjct: 67  SRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHL 126

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
             A  ++G +      P+  T+  LI  LC  GR+ +A  L   +    C PNVVT+  L
Sbjct: 127 DAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVL 183

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           +  +C+      A+ + +EM  +    C P++VTYN II+G+C++G VD A++LL ++  
Sbjct: 184 LEAMCKNSGFEQAMAVLDEMRAKG---CTPNIVTYNVIINGMCREGRVDDARDLLNRLFS 240

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
               P+ ++Y +L+ G C    W + + LF EMM+    P+ VTF+ +I + C+ G +++
Sbjct: 241 YGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVER 300

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             ++L+ M +     +T   N +++  C  GR+  A +   +M S GC  D  SY  ++ 
Sbjct: 301 AIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLK 360

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             C+ ++  DA  L +EM+     P+ +T+NT +  L Q G +  A+ LI++MQ +    
Sbjct: 361 GLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTV 420

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
              T+   ++G C  G +  A+++F   R+  C+    TY  L+ GLC   RL  A +L 
Sbjct: 421 GVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDAAAELV 477

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             + H+   P+VVT + ++++ C++G +D+A +L+  M    C P+ +T+ TL  G  ++
Sbjct: 478 AEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKD 537

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                 + LLH + + K V  D+   S ++ +LSK+ +  E +  F HL
Sbjct: 538 CSSEDALELLHGLVS-KGVSPDVITFSSIIGILSKEDRVEEAIQMF-HL 584



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 273/531 (51%), Gaps = 11/531 (2%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           T + + L DR +       +A+   D M++    P + ++T+LL  + KN  ++  +++ 
Sbjct: 146 TPLIRVLCDRGRVA-----DALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVL 200

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
             + + G  P++   N++IN +C+ G    A  +L R+      P+TV++  L+ GLCA 
Sbjct: 201 DEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCAS 260

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
            R  +   LF ++    C PN VTF+ LI   CR      A+++ ++M       C  + 
Sbjct: 261 KRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHE---CATNT 317

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
              N +I+ +CK G VD A + L  M     NP+ I+Y +++ G C  + W +AK L  E
Sbjct: 318 TLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKE 377

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+ N   P+ VTFN  I   C+ G +++   L+E M + G     VTYN+L++GFC+ G 
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH 437

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           I  A ELF SM    C+ +  +Y  L+   C  ++++ A  L  EML     P+V+T+N 
Sbjct: 438 IDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNV 494

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L++   Q G L +A++L+++M  +   P+  T+ T  DG+ K+    +A+++   + +  
Sbjct: 495 LVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG 554

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + T++ +I  L K  R++ A ++FH  Q  G  P  +  + ++  LCK  ++D A 
Sbjct: 555 VSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAI 614

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           D L  M +  C+P+E T+  L+ G  +     +   LL  + +  +V  +L
Sbjct: 615 DFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNL 665



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 184/369 (49%), Gaps = 18/369 (4%)

Query: 22  FWCSFG---RPPNPKTDLSSHHFKDGTSIAKF-LNDRHKSGNITSNEAVYFFDCMIKMKP 77
           F+C  G   R       ++ H     T++    +N   K G +  ++A  F + M     
Sbjct: 291 FFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRV--DDAFKFLNNMGSYGC 348

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P   S+T +L  L + ++++    L K +  N   P+    N  I  LC+ G+   A +
Sbjct: 349 NPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 408

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           ++ ++     T   VT+N L+NG C +G I  A  LF+ +    C PN +T+ TL+ GLC
Sbjct: 409 LIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLC 465

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                  A +L  EM++     C P+VVT+N +++  C+ GF+D+A EL+ QM +    P
Sbjct: 466 NAERLDAAAELVAEMLHR---DCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTP 522

Query: 258 NVITYNSLICGF---CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           N+ITYN+L  G    C  +D  E   L   ++  GV PDV+TF+++I    K+ ++++  
Sbjct: 523 NLITYNTLFDGITKDCSSEDALE---LLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAI 579

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           ++  L    G+ P  + YN ++ G C    I  A +    MVS GC  +  +Y ILI   
Sbjct: 580 QMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGL 639

Query: 375 CKDQKVEDA 383
            ++  +++A
Sbjct: 640 AREGLLKEA 648


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 170/608 (27%), Positives = 295/608 (48%), Gaps = 77/608 (12%)

Query: 59  NITSNEAVYFFDCMIKMKP--SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           N  S  A+  F  M K     SP + ++  ++    K  +     SLF  +   G+ PD+
Sbjct: 241 NSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDV 300

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              NL+I+ LCK      A +VL ++  +   P+TVT+N +I+G    GR+ EAA++F+K
Sbjct: 301 VTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRK 360

Query: 177 L-------NVFACD----------------------------PNVVTFNTLINGL----- 196
           +       N+  C+                            P++V++ TL++G      
Sbjct: 361 MKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGW 420

Query: 197 -------------------CRTRNTLV-----------ALKLFEEMVNEFGAICKPDVVT 226
                              CR  N L+           A+ +F EM  +      PDVVT
Sbjct: 421 FADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG---VSPDVVT 477

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+++I    + G +  A E   QM  R I PN   Y+S+I GFC      +AK L  EM+
Sbjct: 478 YSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMI 537

Query: 287 DNGV-QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           + G+ +PD+V FN++IN  CKDG++   + + +L+   G  PD +T+ SL+DG+CLVG++
Sbjct: 538 NKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKM 597

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
            +A ++  +M   G   D+ +Y+ L++   K+ ++ D + L+REM  + ++P+ +TY  +
Sbjct: 598 DKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIM 657

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           L+GLF+ G    A K   +M  +        +   + GLC+N    EA+ +FQ +     
Sbjct: 658 LAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNV 717

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +  I   N +IN + K+ R + A +LF  +   G +P+  T   MI  L K+G ++ AN+
Sbjct: 718 KFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANN 777

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           +   ME    VP       ++R  ++  + +K    L K+  +++++ + S +S ++ L 
Sbjct: 778 MFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILL-EASTTSLMLSLF 836

Query: 586 SKDKKYRE 593
           S+  KY E
Sbjct: 837 SRKGKYHE 844



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 278/565 (49%), Gaps = 53/565 (9%)

Query: 52  NDRHKSGNITSNEAVYFFDCMIKMK-PSPGMTSFTILLTMLAKNKQYDT--------VVS 102
            +R ++G ++ ++A + FD + +   P PG  S    LT LA+               ++
Sbjct: 80  TERVRAGTLSRDDAHHMFDELFRQATPVPG-RSLNGFLTALARATSSSACITDGPALALA 138

Query: 103 LFKRLNSNGLFPDLFVL-----NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           LF R+      P +  L     ++L++C C+        V+ G ILR+    + +T + L
Sbjct: 139 LFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTL 198

Query: 158 INGLCAEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           +  LC   R  EA   L  +++   C PNV +++ ++ GLC    +  AL LF+ M  E 
Sbjct: 199 LKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEG 258

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
           GA C P+VV YN++I G  K+G   KA  L  +M  + + P+V+TYN +I   C      
Sbjct: 259 GA-CSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD 317

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A+ +  +M  NG QPD VT+N MI+     G++ +  ++   M  RG+ P+ V  NS +
Sbjct: 318 KAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFL 377

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSY----------------------------- 367
              C  GR   A E+F SM +KG + D+ SY                             
Sbjct: 378 ASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIA 437

Query: 368 ------NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
                 NILI+A  K   V+DA+ ++ EM  + + P V+TY+T++S   ++G L DA++ 
Sbjct: 438 ADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEK 497

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ-VFQAIRNCKCELRIETYNCLINGLC 480
            ++M    + P++  + + I G C +G +++A + V + I        I  +N +IN LC
Sbjct: 498 FNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLC 557

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K GR+  A  +F  +   G  PDV+T +++I   C  G+MDKA  +L  ME        V
Sbjct: 558 KDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIV 617

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
           T+ TLL G+ +N + +  + L  +M
Sbjct: 618 TYSTLLDGYFKNGRINDGLTLFREM 642



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 202/466 (43%), Gaps = 37/466 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S EA   FD M      P + S+  LL   A    +  ++ LF  + SNG+  D  V N+
Sbjct: 386 SKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNI 445

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+   K G+   A ++   + +   +P+ VT++ +I+     GR+ +A   F ++    
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN   ++++I G C     + A +L  EM+N+   I +PD+V +NS+I+ LCKDG V 
Sbjct: 506 IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINK--GIPRPDIVFFNSVINSLCKDGRVM 563

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA----------------------- 278
            A ++   + D    P+VIT+ SLI G+C V    +A                       
Sbjct: 564 DAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLL 623

Query: 279 ------------KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
                         LF EM   GV+P+ VT+  M+    + G+     +    MI+ G  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
                Y  ++ G C       A  LF  + +   +  +   N +INA  K Q+ E+A  L
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           +  + +  + P+  TY  ++  L + G + DA  +   M+ + +VP S      I  L +
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE 803

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
            G + +A      +   +  L   T + +++   + G+     KL 
Sbjct: 804 KGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 212/441 (48%), Gaps = 19/441 (4%)

Query: 170 AARLFKKLNVFACDPNVV-----TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           A  LF ++      P VV     T++ L++  CR R   + L LF       G I +  +
Sbjct: 136 ALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLF-------GCILRTGL 188

Query: 225 ----VTYNSIIDGLCKDGFVDKAKELLL-QMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
               +T ++++  LC     ++A  +LL +M +    PNV +Y+ ++ G C     + A 
Sbjct: 189 KIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRAL 248

Query: 280 CLFIEMMDNG--VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
            LF  M   G    P+VV +N +I+   K+G+  K   L   M ++GV PD VTYN ++D
Sbjct: 249 DLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIID 308

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
             C    + +A  +   M + G + D  +YN +I+      ++++A  ++R+M S  + P
Sbjct: 309 ALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIP 368

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +++  N+ L+ L + G   +A ++ D M      PD  ++ T + G    G+  + + +F
Sbjct: 369 NIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLF 428

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
            ++++         +N LI+   K G +  A  +F  +Q +G  PDVVT ST+I    + 
Sbjct: 429 NSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRM 488

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G++  A +    M A+   P+   + ++++GF  +    K   L+ +M  + +   D+  
Sbjct: 489 GRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVF 548

Query: 578 SSKVVDLLSKDKKYRECLNQF 598
            + V++ L KD +  +  + F
Sbjct: 549 FNSVINSLCKDGRVMDAHDIF 569



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 190/401 (47%), Gaps = 4/401 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M +   SP + +++ +++  ++  +    +  F ++ + G+ P+  V + +
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSI 516

Query: 123 INCLC-KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I   C   G+     +V   I +    P+ V FN +IN LC +GR+M+A  +F  +    
Sbjct: 517 IQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIG 576

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V+TF +LI+G C       A K+ + M  E   + + D+VTY++++DG  K+G ++
Sbjct: 577 ERPDVITFTSLIDGYCLVGKMDKAFKILDAM--EVVGV-ETDIVTYSTLLDGYFKNGRIN 633

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
               L  +M+ + + PN +TY  ++ G         A+  F EM+++G    V  +  ++
Sbjct: 634 DGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIIL 693

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C++   D+   L + +    V       N++++    V R   A+ELF ++ + G  
Sbjct: 694 GGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLL 753

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  +Y ++I    KD  VEDA  ++  M    I P     N ++  L + G +  A   
Sbjct: 754 PNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNY 813

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           + K+    ++ ++ T +  +    + G   E +++  A  N
Sbjct: 814 LSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLLPAKYN 854


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 260/511 (50%), Gaps = 2/511 (0%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +S + +   ++  F  ++ ++  P   +F +L+            +S    +   GL PD
Sbjct: 179 RSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPD 238

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N L+N  C+ G+   A  +L R+ +    P   T+N L++     G I +A ++ +
Sbjct: 239 AVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVE 298

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +     +P++ T+N L  GLC+      A +L +EM    G +  PDVVTYN++ D   
Sbjct: 299 AMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEM-ERLGTLL-PDVVTYNTLADACF 356

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K      A  LL +M+++ +   ++T+N +I G C   + + A     +M D+G+ PDV+
Sbjct: 357 KCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVI 416

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I+ +CK G + K   L++ M++RG+  DT T N+++   C   R   A+ L  S 
Sbjct: 417 TYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSP 476

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +G   D  SY  ++ A  K+   E A+ L+ EM+ +++ PS+ TYNTL+ GL ++G L
Sbjct: 477 PQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRL 536

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A+  ++++    +VPD  T+   I   CK G +  A Q    +     +  + T N L
Sbjct: 537 KEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTL 596

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           +NGLC  G+L  A KLF     KG   DV+T +T+I  +CK+G +D A     DMEA+  
Sbjct: 597 MNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGL 656

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            P   T+  +L    +  +  +   +LHK+A
Sbjct: 657 QPDAFTYNVVLSALSEAGRTEEAQNMLHKLA 687



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 240/551 (43%), Gaps = 88/551 (15%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    LN   + G +   EA      M K   +P   ++  L++  A+         
Sbjct: 238 DAVTYNTLLNAHCRKGML--GEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATK 295

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV------LGRILRSCFTPNT----- 151
           + + + +NG  PDL+  N+L   LC+ G    AF +      LG +L    T NT     
Sbjct: 296 VVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADAC 355

Query: 152 -------------------------VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
                                    VT N +I GLC +G +  A     K+      P+V
Sbjct: 356 FKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDV 415

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNE------------FGAICK------------- 221
           +T+NTLI+  C+  N   A  L +EMV                 +CK             
Sbjct: 416 ITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQS 475

Query: 222 -------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                  PD V+Y +++    K+   + A  L  +M ++ + P++ TYN+LI G   +  
Sbjct: 476 PPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGR 535

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
            KEA     E+M+ G+ PD  T+N +I+  CK+G ++   +    M++    PD VT N+
Sbjct: 536 LKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNT 595

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           LM+G CL G++ +A +LF S V KG + DV +YN LI   CKD  V+ A+  + +M +  
Sbjct: 596 LMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARG 655

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           ++P   TYN +LS L + G   +A  ++ K+  +  +  SF+       L K   V EA 
Sbjct: 656 LQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFS-----SPLLKPSSVDEA- 709

Query: 455 QVFQAIRNCKCELRI---------ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
              ++ ++ K E            E Y  L+NGLC  G+ K A  +   +  KG   D  
Sbjct: 710 ---ESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSS 766

Query: 506 TCSTMIHWLCK 516
           T  T++  L K
Sbjct: 767 TYITLMEGLVK 777



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 189/451 (41%), Gaps = 76/451 (16%)

Query: 184 PNVVTFNTLINGLCRTRNT--LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           P++   N +++ L R+ +T    +L  F  +V        P+  T+N ++   C  G + 
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIV---ALRLHPNHYTFNLLVHTHCSKGTLA 221

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A   L  M+   ++P+ +TYN+L+   C      EA+ L   M  +GV P   T+N ++
Sbjct: 222 DALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLV 281

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   + G + +  +++E M   G  PD  TYN L  G C  G++  A  L   M   G  
Sbjct: 282 SAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTL 341

Query: 362 -HDVYSYN-----------------------------------ILINANCKDQKVEDAVC 385
             DV +YN                                   I+I   CKD ++E A+ 
Sbjct: 342 LPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALG 401

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
              +M  + + P VITYNTL+    + GN+  A  L+D+M    +  D+FT  T +  LC
Sbjct: 402 CLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLC 461

Query: 446 KNGFVLEAVQVFQAIR----------------------NCKCELR-------------IE 470
           K     EA  + Q+                        N +  LR             I 
Sbjct: 462 KEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIS 521

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYN LI GL +MGRLK A    + L  KG +PD  T + +IH  CKEG ++ A      M
Sbjct: 522 TYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKM 581

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
              +  P  VT  TL+ G   N K  K + L
Sbjct: 582 VENSFKPDVVTCNTLMNGLCLNGKLDKALKL 612



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 3/301 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   S+  ++    K    +  + L+  +    L P +   N LI  L +MG    A   
Sbjct: 483 PDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDK 542

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  ++     P+  T+N +I+  C EG +  A +   K+   +  P+VVT NTL+NGLC 
Sbjct: 543 LNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCL 602

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 ALKLFE  V +   +   DV+TYN++I  +CKDG VD A      M+ R + P+
Sbjct: 603 NGKLDKALKLFESWVEKGKKV---DVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPD 659

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             TYN ++         +EA+ +  ++ ++G      +   +   +  + +  K  +  E
Sbjct: 660 AFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEE 719

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
             ++   +  +  Y  L++G C  G+   A+ +   M+ KG   D  +Y  L+    K Q
Sbjct: 720 ETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQ 779

Query: 379 K 379
           K
Sbjct: 780 K 780



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 4/308 (1%)

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRL--LELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           V+P +   NA+++   +         L     ++   ++P+  T+N L+   C  G ++ 
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A     +M   G   D  +YN L+NA+C+   + +A  L   M  + + P+  TYNTL+S
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
              ++G +  A K+++ M  N   PD +T+     GLC+ G V EA ++   +      L
Sbjct: 283 AYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLL 342

Query: 468 R-IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + TYN L +   K      A +L   ++ KG    +VT + +I  LCK+G+++ A   
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           L  M      P  +T+ TL+    +    +K   L+ +M    L +   +L++ + + L 
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYN-LC 461

Query: 587 KDKKYREC 594
           K+K+Y E 
Sbjct: 462 KEKRYEEA 469



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 394 RIRPSVITYNTLLSGLFQVGNLG-----DALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           R+RPS+   N +LS L +  +       DA + I  ++L+   P+ +TF   +   C  G
Sbjct: 162 RVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLH---PNHYTFNLLVHTHCSKG 218

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + +A+     ++         TYN L+N  C+ G L  A  L  R++  G  P   T +
Sbjct: 219 TLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYN 278

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T++    + G + +A  ++  M A    P   T+  L  G  Q  K  +   L  +M
Sbjct: 279 TLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEM 335


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 158/479 (32%), Positives = 254/479 (53%), Gaps = 40/479 (8%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           +I   +A   F  M+  +P P +  FT LLT  A  ++Y+TV+   +++   G+  DL+ 
Sbjct: 49  SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
             +LI+C C+    S A  VLG++++  + P+ VTF  L++G C   RI +A  L   + 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-FGAICKPDVVTYNSIIDGLCKD 237
               +PNVV +NTLI+GLC+     +AL+L  EM  +  GA    DVVTYN+++ GLC  
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA----DVVTYNTLLTGLCYS 224

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G    A  +L  M  R+INP+V+T+ +LI  F    +  EA+ L+ EM+ + V P+ VT+
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N++IN  C  G++    +  +LM  +G  P+ VTYN+L+ GFC    +    +LF  M  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +G   D+++YN LI+  C+  K+  A+ ++  M+S R+ P +IT+  LL G         
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG--------- 395

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
                                     LC NG +  A+  F  +R  +  + I  YN +I+
Sbjct: 396 --------------------------LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIH 429

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           GLCK  +++ A +LF RL  +G  PD  T + MI  LCK G   +A++L+  M+ +  +
Sbjct: 430 GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 215/437 (49%), Gaps = 3/437 (0%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           AF +   ++ S   P+ V F  L+       R        +K+ ++    ++ +F  LI+
Sbjct: 55  AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             CR      AL +  +M+ + G   +P +VT+ S++ G C    +  A  L++ M    
Sbjct: 115 CFCRCSRLSFALSVLGKMM-KLGY--EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PNV+ YN+LI G C   +   A  L  EM   G+  DVVT+N ++   C  G+     
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           R+L  M++R +NPD VT+ +L+D F   G +  A+EL+  M+      +  +YN +IN  
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   ++ DA   +  M S+   P+V+TYNTL+SG  +   + + +KL  +M       D 
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           FT+ T I G C+ G +  A+ +F  + + +    I T+  L++GLC  G +++A   F  
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           ++       +V  + MIH LCK  +++KA +L   +  +   P   T+  ++ G  +N  
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471

Query: 555 KSKVVVLLHKMAAEKLV 571
           + +   L+ +M  E ++
Sbjct: 472 RREADELIRRMKEEGII 488



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 189/385 (49%), Gaps = 3/385 (0%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A  LF EMV+   +   P +V +  ++         +       +M+   I+ ++ ++  
Sbjct: 55  AFALFFEMVH---SQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI  FC       A  +  +MM  G +P +VTF ++++  C   ++     L+ LM++ G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             P+ V YN+L+DG C  G ++ A EL   M  KG   DV +YN L+   C   +  DA 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            + R+M+   I P V+T+  L+    + GNL +A +L  +M  + V P++ T+ + I+GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C +G + +A + F  + +  C   + TYN LI+G CK   +    KLF R+  +G   D+
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
            T +T+IH  C+ G++  A D+   M ++   P  +T C LL G   N +    +V    
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDK 589
           M   +  +  ++ +  +  L   DK
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADK 436



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 155/327 (47%), Gaps = 11/327 (3%)

Query: 253 RNINPNVITYNS-----------LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           R +NPN++   +           L  GF     +++A  LF EM+ +   P +V F  ++
Sbjct: 19  RVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLL 78

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
                  + + V    + M   G++ D  ++  L+  FC   R+S A  +   M+  G  
Sbjct: 79  TATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYE 138

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             + ++  L++  C   ++ DA  L   M+     P+V+ YNTL+ GL + G L  AL+L
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +++M+   +  D  T+ T + GLC +G   +A ++ + +        + T+  LI+   K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G L  A +L+  +      P+ VT +++I+ LC  G++  A      M +K C P+ VT
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           + TL+ GF +     + + L  +M+ E
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCE 345


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 165/522 (31%), Positives = 264/522 (50%), Gaps = 23/522 (4%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           NI+  E V  F  M++ + SP + ++ IL+         D  ++LF ++ + G  P++  
Sbjct: 185 NISFAENV--FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            N LI+  CK+      F +L  +      PN +++N +INGLC EGR+ E + +  ++N
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                 + VT+NTLI G C+  N   AL +  EM+        P V+TY S+I  +CK G
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG---LTPSVITYTSLIHSMCKAG 359

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +++A E L QM+ R + PN  TY +L+ GF       EA  +  EM DNG  P VVT+N
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+IN +C  GKM+    +LE M ++G++PD V+Y++++ GFC    +  A  +   MV K
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G + D  +Y+ LI   C+ ++ ++A  LY EML   + P   TY  L++     G+L  A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA----------------VQVFQAIRN 462
           L+L ++M    V+PD  T++  I+GL K     EA                V     I N
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
           C   +  ++   LI G C  G +  A ++F  +  K   PD    + MIH  C+ G + K
Sbjct: 600 C-SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV-VVLLH 563
           A  L  +M     +   VT   L++   +  K +++  V++H
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVH 700



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 266/556 (47%), Gaps = 55/556 (9%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT-SGAFVVLGRILRSCFTPNTVTFNF 156
           D  +S+     ++G  P +   N +++   +     S A  V   +L S  +PN  T+N 
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           LI G C  G I  A  LF K+    C PNVVT+NTLI+G C+ R      KL   M  + 
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
               +P++++YN +I+GLC++G + +   +L +M  R  + + +TYN+LI G+C   ++ 
Sbjct: 271 ---LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  +  EM+ +G+ P V+T+ ++I+  CK G M++    L+ M  RG+ P+  TY +L+
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           DGF   G ++ A  +   M   G    V +YN LIN +C   K+EDA+ +  +M  + + 
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P V++Y+T+LSG  +  ++ +AL++  +M    + PD+ T+++ I G C+     EA  +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL-- 514
           ++ +          TY  LIN  C  G L+ A +L + +  KG +PDVVT S +I+ L  
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 515 ------------------------------------------------CKEGQMDKANDL 526
                                                           C +G M +A+ +
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
              M  KN  P    +  ++ G  +     K   L  +M     ++  +++ + +V  L 
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA-LVKALH 686

Query: 587 KDKKYRECLNQFRHLL 602
           K+ K  E  +   H+L
Sbjct: 687 KEGKVNELNSVIVHVL 702



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/460 (30%), Positives = 236/460 (51%), Gaps = 4/460 (0%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR-IMEAARLFKK 176
           V +L++    ++ +   A  ++       F P  +++N +++      R I  A  +FK+
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      PNV T+N LI G C   N  VAL LF++M  +    C P+VVTYN++IDG CK
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG---CLPNVVTYNTLIDGYCK 252

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              +D   +LL  M  + + PN+I+YN +I G C     KE   +  EM   G   D VT
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I   CK+G   +   +   M++ G+ P  +TY SL+   C  G ++RA E    M 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +G   +  +Y  L++   +   + +A  + REM      PSV+TYN L++G    G + 
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           DA+ +++ M+   + PD  +++T + G C++  V EA++V + +     +    TY+ LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            G C+  R K AC L+  +   G  PD  T + +I+  C EG ++KA  L  +M  K  +
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           P  VT+  L+ G  + ++  +   LL K+  E+ V SD++
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 174/393 (44%), Gaps = 49/393 (12%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN+  N A+ F D M      P   ++T L+   ++    +    + + +N NG  P 
Sbjct: 357 KAGNM--NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N LIN  C  G    A  VL  +     +P+ V+++ +++G C    + EA R+ +
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV------NEF------GAICK-- 221
           ++      P+ +T+++LI G C  R T  A  L+EEM+      +EF       A C   
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534

Query: 222 ------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
                             PDVVTY+ +I+GL K     +AK LLL++      P+ +TY+
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594

Query: 264 ---------------SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
                          SLI GFC      EA  +F  M+    +PD   +N MI+ +C+ G
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            + K   L + M++ G    TVT  +L+      G+++    + V ++      +     
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAK 714

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           +L+  N ++  ++  + +  EM  +   P+ I+
Sbjct: 715 VLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 153/471 (32%), Positives = 254/471 (53%), Gaps = 6/471 (1%)

Query: 100 VVSLFKRLNSNGLF---PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNF 156
           V+ +F+++N++G F   P L   N ++  L K  +      V   +L +  +PN  TFN 
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           ++NG C  G ++EA     K+      P+  T+ +LI G CR +    A ++F  M  + 
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
              C+ + V+Y ++I GLC+ G +++A +L   M + N  P V TY  LI          
Sbjct: 260 ---CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           EA  LF EM + G +P+V T+  +I+  CK+ KMD+  ++L  M ++G+ P  VTYN+L+
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           DG+C  G I  A E+   M S  C  +  +YN LI   CK +KV  A+ L  +ML  ++ 
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           PS+ITYN+L+ G  +V +L  A +L+  M  N +VPD +T++ +ID LCK G V EA  +
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F +++    +     Y  LI+G CK+G++  A  L  R+ +   +P+  T + +I  LCK
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           E +M +A+ L+  M      P+ VT+  L+   +++      + + + M +
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 245/499 (49%), Gaps = 5/499 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+   EA  +   +++    P   ++T L+    +NK  D    +F  +   G   +
Sbjct: 206 KIGNVV--EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRN 263

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 LI+ LC+ G  + A  +   +      P   T+  LI  L   GR +EA  LF 
Sbjct: 264 EVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++    C+PNV T+  LI+GLC+      A K+  EM +E G I  P VVTYN++IDG C
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM-SEKGLI--PSVVTYNALIDGYC 380

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G +D A E+L  M+  +  PN  TYN LICG C      +A  L  +M++  + P ++
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N++I+  CK   ++   RLL LM + G+ PD  TY+  +D  C  GR+  A  LF S+
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            +KG + +   Y  LI+  CK  K++ A  L   ML++   P+  TYN L+ GL +   +
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A  L+ KM    V P   T+   I  + K+G    A++VF  + +   +  + TY   
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           ++     G L+    +  ++  +G +PD+VT + +I    + G   +A D L  M    C
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680

Query: 536 VPSEVTFCTLLRGFVQNNK 554
            PS      L++     N+
Sbjct: 681 KPSLYIVSILIKNLSHENR 699



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 237/502 (47%), Gaps = 21/502 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+  F  M +    P + ++T+L+  L+ + +    ++LF  +   G  P++    +L
Sbjct: 281 NEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVL 340

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK      A  +L  +      P+ VT+N LI+G C EG I +A  +   +   +C
Sbjct: 341 IDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSC 400

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN  T+N LI GLC+ R    A+ L  +M+        P ++TYNS+I G CK   ++ 
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLER---KLSPSLITYNSLIHGQCKVNDLES 457

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL  M +  + P+  TY+  I   C     +EA  LF  +   GV+ + V + A+I+
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK GK+D    LLE M+     P++ TYN L++G C   ++  A  L   M++ G + 
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V +Y ILI    KD   + A+ ++  M+S   +P V TY   L   F  G L +   +I
Sbjct: 578 TVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            KM    ++PD  T+   IDG  + G    A    + + +  C+  +   + LI  L   
Sbjct: 638 AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697

Query: 483 GRLKT------------------ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            R+K                   A KLF ++   G   DV     +I   C++ ++++A 
Sbjct: 698 NRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQ 757

Query: 525 DLLLDMEAKNCVPSEVTFCTLL 546
            L+  M+ +   PSE  + +LL
Sbjct: 758 GLVHHMKERGMSPSEDIYNSLL 779



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 239/512 (46%), Gaps = 23/512 (4%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  ++A    D M      P   ++  L+  L K ++    ++L  ++    L P 
Sbjct: 381 KEGMI--DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           L   N LI+  CK+     A+ +L  +  +   P+  T++  I+ LC EGR+ EA  LF 
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +       N V +  LI+G C+     VA  L E M+N+    C P+  TYN +I+GLC
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND---ACLPNSYTYNVLIEGLC 555

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+  + +A  L+ +M    + P V+TY  LI        +  A  +F  M+  G QPDV 
Sbjct: 556 KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+ A ++     G +++V+ ++  M + G+ PD VTY  L+DG+  +G   RA +    M
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675

Query: 356 VSKGCRHDVYSYNILINANCKDQKVED------------------AVCLYREMLSERIRP 397
           V  GC+  +Y  +ILI     + ++++                  A+ L+ +M+      
Sbjct: 676 VDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTI 735

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            V  Y  L++G  Q   L +A  L+  M+   + P    + + +D  CK G   EAV++ 
Sbjct: 736 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 795

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
            A+        +E+Y  L+ GL   G  + A  +FH L   G   D V    +I  L K 
Sbjct: 796 DAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKR 855

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
             +D+ ++L+  ME K C P+ +T+  L+ G 
Sbjct: 856 DLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 226/438 (51%), Gaps = 36/438 (8%)

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           ++I   C   + L  L++F +M  +     KP +  YN+I+  L K   +D+ K + L++
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
            +  I+PN+ T+N+++ G+C + +  EA+    +++  G+ PD  T+ ++I  +C++  +
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGV 245

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS------------- 357
           D    +  +M Q+G   + V+Y +L+ G C  GRI+ A +LF  M               
Sbjct: 246 DNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305

Query: 358 ----------------------KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
                                 KGC  +V++Y +LI+  CK+ K+++A  +  EM  + +
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            PSV+TYN L+ G  + G + DA +++D M+ N   P++ T+   I GLCK   V +A+ 
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +   +   K    + TYN LI+G CK+  L++A +L   +   G +PD  T S  I  LC
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLC 485

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           KEG++++A  L   ++AK    +EV +  L+ G+ +  K      LL +M  +  + +  
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545

Query: 576 SLSSKVVDLLSKDKKYRE 593
           + +  +++ L K+KK +E
Sbjct: 546 TYNV-LIEGLCKEKKMKE 562



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 58/273 (21%)

Query: 359 GCRHDVYSY----NILINAN----------------CKDQKVEDAVCLYREM-------- 390
           G +H+V+SY    NILI A                 C  + V   + ++R+M        
Sbjct: 96  GFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKF 155

Query: 391 ------------------------------LSERIRPSVITYNTLLSGLFQVGNLGDALK 420
                                         L+ +I P++ T+N +++G  ++GN+ +A  
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
              K+    + PD+FT+ + I G C+N  V  A +VF  +    C+    +Y  LI+GLC
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + GR+  A KLF  +      P V T + +I+ L   G+  +A +L  +M+ K C P+  
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           T+  L+ G  + NK  +   +L +M+ + L+ S
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 51/122 (41%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP    +  LL    K   Y   V L   +  NGL P L    LL+  L   G    A  
Sbjct: 769 SPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKA 828

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V   +L   +  + V +  LI+GL     + E + L   +    C PN +T++ LI GL 
Sbjct: 829 VFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLE 888

Query: 198 RT 199
           RT
Sbjct: 889 RT 890


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/557 (29%), Positives = 275/557 (49%), Gaps = 80/557 (14%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   S+ ++L +L          ++F  + S G+ P ++   +++   C +     A  
Sbjct: 162 EPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACS 221

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  + +    PN++ +  LI+ L    R+ EA +L +++ +  C+P+V TFN +I+GLC
Sbjct: 222 LLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLC 281

Query: 198 RTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           +      A KL + M+  +F A    D +    ++ GLC+ G VD+A+ +L ++     N
Sbjct: 282 KAGRIHEAAKLHDRMLLRDFTA----DALIQGYLMHGLCRMGKVDEARAMLSKIP----N 333

Query: 257 PNVITYNSLICGFCCVDDWKEAK-CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           PN + YN+LI G+     ++EAK  L+  M+  G +PD  TFN MI+  CK G +     
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393

Query: 316 LLELMIQRGVNPDTVTYNSLMDGF-----------------------------CLV---- 342
            L+ M+++G  P+ +TY  L+DGF                             CL+    
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453

Query: 343 --GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G+I  A +++  M SKGC+ D+Y++N LI   CK+ K+E+A+ LYR+ML E +  + +
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV------ 454
           TYNTL+    ++  +  A KL+ +M+      D+ T+   I  LCK G   + +      
Sbjct: 514 TYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQM 573

Query: 455 ---QVFQAIRNCKCELR--------------------------IETYNCLINGLCKMGRL 485
              ++F +I +C   +                           I TYN LINGLCKMGR 
Sbjct: 574 FGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRF 633

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A  LF+ LQ KG  PD VT +T+I   C EG  + A  LL    +   +P+E+T+  L
Sbjct: 634 QEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSIL 693

Query: 546 LRGFVQNNKKSKVVVLL 562
           +  FV+NN  S+   +L
Sbjct: 694 INYFVKNNSDSEQFTIL 710



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 150/461 (32%), Positives = 236/461 (51%), Gaps = 8/461 (1%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           S N   NEA+   + M  M   P + +F  ++  L K  +      L  R+       D 
Sbjct: 246 SENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADA 305

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FK 175
            +   L++ LC+MG    A  +L +I      PNTV +N LING    GR  EA  L +K
Sbjct: 306 LIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYK 361

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            + +   +P+  TFN +I+GLC+    + AL+  +EMV +     +P+V+TY  +IDG C
Sbjct: 362 NMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG---FEPNVITYTILIDGFC 418

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G  ++A +++  M  + ++ N + YN LI   C     ++A  ++ EM   G +PD+ 
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           TFN++I   CK+ KM++   L   M+  GV  +TVTYN+L+  F  +  I +A +L   M
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM 538

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +GC  D  +YN LI A CK    E  + L  +M  E I PS+ + N L++   + G +
Sbjct: 539 RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKV 598

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            DAL+ +  M    + PD  T+ + I+GLCK G   EA+ +F  ++         TYN L
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTL 658

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           I+  C  G    AC+L  +    G IP+ +T S +I++  K
Sbjct: 659 ISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 196/378 (51%), Gaps = 4/378 (1%)

Query: 71  CMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL-FKRLNSNGLFPDLFVLNLLINCLCKM 129
            M+   P+P    +  L+     + +++    L +K +   G  PD F  N++I+ LCK 
Sbjct: 326 AMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKK 385

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G    A   L  +++  F PN +T+  LI+G C +G   EA+++   ++      N V +
Sbjct: 386 GYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGY 445

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N LI  LC+      AL+++ EM ++    CKPD+ T+NS+I GLCK+  +++A  L   
Sbjct: 446 NCLIGALCKDGKIQDALQMYGEMSSKG---CKPDIYTFNSLIYGLCKNDKMEEALGLYRD 502

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M    +  N +TYN+LI  F  ++  ++A  L  EM   G   D +T+N +I   CK G 
Sbjct: 503 MLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGA 562

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
            +K   L+E M    + P   + N L++ FC  G+++ A +    M+ +G   D+ +YN 
Sbjct: 563 TEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNS 622

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN  CK  + ++A+ L+  + ++ I P  +TYNTL+S     G   DA +L+ K   N 
Sbjct: 623 LINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNG 682

Query: 430 VVPDSFTFATYIDGLCKN 447
            +P+  T++  I+   KN
Sbjct: 683 FIPNEITWSILINYFVKN 700



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 237/492 (48%), Gaps = 9/492 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + +L+  L    ++  +  L K++   G      +  L++    K G+   A  +L  + 
Sbjct: 97  YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156

Query: 144 R-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
              CF P   ++N ++  L A      A  +F  +      P V TF  ++   C     
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEV 216

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A  L  +M       C P+ + Y  +I  L ++  V++A +LL +M      P+V T+
Sbjct: 217 DSACSLLRDMTKHG---CVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N +I G C      EA  L   M+      D +    +++  C+ GK+D+       M+ 
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA----MLS 329

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRAREL-FVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           +  NP+TV YN+L++G+ + GR   A++L + +MV  G   D +++NI+I+  CK   + 
Sbjct: 330 KIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLV 389

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A+    EM+ +   P+VITY  L+ G  + G+  +A K+++ M    +  ++  +   I
Sbjct: 390 SALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLI 449

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
             LCK+G + +A+Q++  + +  C+  I T+N LI GLCK  +++ A  L+  +  +G I
Sbjct: 450 GALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVI 509

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            + VT +T+IH   +   + +A+ L+ +M  + C    +T+  L++   +     K + L
Sbjct: 510 ANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGL 569

Query: 562 LHKMAAEKLVVS 573
           + +M  E++  S
Sbjct: 570 IEQMFGEEIFPS 581



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 48/284 (16%)

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC-------------------- 360
           +QRG       Y  L+D    VG      +L   M  +GC                    
Sbjct: 86  LQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLP 145

Query: 361 ---------RHDVY-------SYN----ILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                       VY       SYN    IL+  NC   KV   V  + +MLS  I P+V 
Sbjct: 146 GQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCP--KVAPNV--FYDMLSRGISPTVY 201

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T+  ++     V  +  A  L+  M  +  VP+S  +   I  L +N  V EA+++ + +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
               CE  ++T+N +I+GLCK GR+  A KL  R+  +    D +    ++H LC+ G++
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKV 321

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           D+A  +L    +K   P+ V + TL+ G+V + +  +   LL+K
Sbjct: 322 DEARAML----SKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYK 361


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/381 (38%), Positives = 217/381 (56%), Gaps = 3/381 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  F+ M+ M+P P    F  +L+ L KNK+Y TV+SLFK+   NG+ PDL  L++LI
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           NC C +   + AF V   IL+  + PN +T N LI GLC  G I  A     K+      
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            + V++ TLINGLC+   T    +L  ++    G   KPD+V Y +II  LCK+  +  A
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLE---GHSVKPDLVMYTTIIHCLCKNKLLGDA 220

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L  +M  + I+PNV TY +LI GFC + + KEA  L  EM    + PDV TFN +I+ 
Sbjct: 221 CDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDA 280

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K+GK+D+   L E M  + + P+ VTY SL+DG C    + RA  L   M  +G + +
Sbjct: 281 LAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPN 340

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           VYSY IL++A CK  ++E+A   ++ +L +    +V TYN +++GL + G  GD + L  
Sbjct: 341 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKS 400

Query: 424 KMQLNDVVPDSFTFATYIDGL 444
           KM+    +P++ TF T I  L
Sbjct: 401 KMEGKGCMPNAITFKTIICAL 421



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 204/403 (50%), Gaps = 3/403 (0%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A   F ++ +    P    FN +++ L + +     + LF++   E   I  PD+ T +
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQF--EPNGI-TPDLCTLS 100

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +I+  C    +  A  +   +  R  +PN IT N+LI G C   + K A     +++  
Sbjct: 101 ILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQ 160

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G Q D V++  +IN  CK G+   V RLL  +    V PD V Y +++   C    +  A
Sbjct: 161 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDA 220

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            +L+  M+ KG   +V++Y  LI+  C    +++A  L  EM  + I P V T+N L+  
Sbjct: 221 CDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDA 280

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G + +A+ L ++M+  ++ P+  T+ + IDGLCKN  +  A+ + + ++    +  
Sbjct: 281 LAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPN 340

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + +Y  L++ LCK GRL+ A + F  L  KG   +V T + MI+ LCK G      DL  
Sbjct: 341 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKS 400

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            ME K C+P+ +TF T++   ++ ++  K    L +M A  L+
Sbjct: 401 KMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLL 443



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 2/158 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  +EA+  F+ M      P + ++T L+  L KN   +  ++L K++   G+ P+
Sbjct: 283 KEGKI--DEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPN 340

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++   +L++ LCK G    A      +L   +  N  T+N +INGLC  G   +   L  
Sbjct: 341 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKS 400

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
           K+    C PN +TF T+I  L        A K   EM+
Sbjct: 401 KMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMI 438


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 164/510 (32%), Positives = 254/510 (49%), Gaps = 4/510 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E    F  M+    S  +++F  LL +L K         L  ++   G+ P+LF  N  
Sbjct: 198 DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFF 257

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  LC+ G    A  ++GR++     P+ VT+N+LI GLC   +  EA     KL     
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL 317

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+  T+NTLI G C+     +A ++   +VN       PD  TY S+IDGLC +G  ++
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERI---LVNAVFNGFVPDEFTYRSLIDGLCHEGETNR 374

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +   + I PNVI YN+LI G        EA  L  EM + G+ P+V TFN ++N
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVN 434

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G +   + L+++MI +G  PD  T+N L+ G+    ++  A E+   M+  G   
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDP 494

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DVY+YN L+N  CK  K ED +  Y+ M+ +   P++ T+N LL  L +   L  AL L+
Sbjct: 495 DVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLL 554

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK-CELRIETYNCLINGLCK 481
           ++M+   V PD+ TF T IDG CKNG +  A  +F+ +           TYN +I+   +
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTE 614

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              +  A KLF  +  +   PD  T   M+   CK G +D     LL+M     +PS  T
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTT 674

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
              ++      ++  +   ++H+M  + LV
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/534 (28%), Positives = 258/534 (48%), Gaps = 6/534 (1%)

Query: 38  SHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQY 97
            +H  +G  +    N   K       EAV  F+ M      P + S+  ++++L  +  +
Sbjct: 71  GNHMLEGVYVGAMKNYGRKG---KVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYF 127

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D    ++ R+   G+ PD++   + +   C+      A  +L  +       N V +  +
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           + G   E    E   LF K+        + TFN L++ LC+  +     KL ++++   G
Sbjct: 188 VGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKR-G 246

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
            +  P++ TYN  I GLC+ G +D A  ++ ++ D+   P+V+TYN LI G C    ++E
Sbjct: 247 VL--PNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQE 304

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A+    ++++ G++PD  T+N +I   CK G +    R+L   +  G  PD  TY SL+D
Sbjct: 305 AEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLID 364

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C  G  +RA  LF   + KG + +V  YN LI        + +A  L  EM  + + P
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIP 424

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            V T+N L++GL ++G + DA  L+  M      PD FTF   I G      +  A+++ 
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             + +   +  + TYN L+NGLCK  + +   + +  +  KG  P++ T + ++  LC+ 
Sbjct: 485 DVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            ++DKA  LL +M+ K+  P  VTF TL+ GF +N        L  KM    +V
Sbjct: 545 HKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMV 598



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 173/340 (50%), Gaps = 4/340 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +N A+  F+  +     P +  +  L+  L+          L   ++  GL P++   N+
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNI 431

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N LCKMG  S A  ++  ++   + P+  TFN LI+G   + ++  A  +   +    
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNG 491

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            DP+V T+N+L+NGLC+T      ++ ++ MV +    C P++ T+N +++ LC+   +D
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKG---CAPNLFTFNILLESLCRYHKLD 548

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-NGVQPDVVTFNAM 300
           KA  LL +MK++++NP+ +T+ +LI GFC   D   A  LF +M +   V     T+N +
Sbjct: 549 KALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNII 608

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+   +   +    +L + M+ R + PD  TY  ++DGFC  G +    +  + M+  G 
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGF 668

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
              + +   +IN  C + +V +A  +   M+ + + P  +
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 187/367 (50%), Gaps = 5/367 (1%)

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
           ++ + AL++F  M  E G   K  + TY SII+ L   G  +  +E+L+ M+ +N+  ++
Sbjct: 18  KDPMKALEMFNSMRKEDGF--KHTLSTYRSIIEKLGLYGKFEAMEEVLVDMR-QNVGNHM 74

Query: 260 I--TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +   Y   +  +      +EA  +F  M     +P V ++NA+++     G  D+ +++ 
Sbjct: 75  LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVY 134

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M  RG+ PD  ++   M  FC   R   A  L  +M S+GC  +V +Y  ++    ++
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
              ++   L+ +ML+  +   + T+N LL  L + G++ +  KL+DK+    V+P+ FT+
Sbjct: 195 NFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
             +I GLC+ G +  AV++   + +   +  + TYN LI GLCK  + + A     +L +
Sbjct: 255 NFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVN 314

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +G  PD  T +T+I   CK G +  A  +L++      VP E T+ +L+ G     + ++
Sbjct: 315 EGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNR 374

Query: 558 VVVLLHK 564
            + L ++
Sbjct: 375 ALALFNE 381



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 6/202 (2%)

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL---CKNGFVLE 452
           + ++ TY +++  L   G      +++  M+ N  V +      Y+  +    + G V E
Sbjct: 37  KHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQN--VGNHMLEGVYVGAMKNYGRKGKVQE 94

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           AV VF+ +    CE  + +YN +++ L   G    A K++ R++ +G  PDV + +  + 
Sbjct: 95  AVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             C+  +   A  LL +M ++ C  + V +CT++ GF + N K +   L  KM A  + +
Sbjct: 155 SFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSL 214

Query: 573 SDLSLSSKVVDLLSKDKKYREC 594
             LS  +K++ +L K    +EC
Sbjct: 215 C-LSTFNKLLHVLCKKGDVKEC 235


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 157/486 (32%), Positives = 251/486 (51%), Gaps = 5/486 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E+VY  + M      P + +   L+  L +  Q  T V + + ++S+ + PD      L+
Sbjct: 180 ESVY--NEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLM 237

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
               + G    A  V  +++ +  +P  VT N LING C  GR+ +A    +K      +
Sbjct: 238 QGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFE 297

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+NT ++ LC+  +   ALK+ + M+ E      PDV TYN++I+ L K+G +D+A
Sbjct: 298 PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGH---DPDVFTYNTVINCLSKNGELDEA 354

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K ++ QM DR   P+  T+N+LI   C  +  +EA  L  E+   G+ PDV TFN +IN 
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G      RL E M   G  PD VTYN L+D  C +G++  A +L   M S GC   
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN +I+A CK  ++E+A  ++ +M +  I  S +T+NTL+ GL +   + DA +LI+
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIE 534

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M    + P + T+ + +   CK G + +A  + + +     E+ + TY  LINGLCK G
Sbjct: 535 QMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAG 594

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R + A KL   ++ KG  P     + +I  L +   +  A  L  +M      P  +T+ 
Sbjct: 595 RTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYK 654

Query: 544 TLLRGF 549
            + RG 
Sbjct: 655 IVFRGL 660



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 264/542 (48%), Gaps = 13/542 (2%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV   + M     +P  T+FT L+    +    +  + +  ++   G  P    +N+LIN
Sbjct: 214 AVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLIN 273

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CKMG    A   + + +   F P+ VT+N  ++ LC  G +  A ++   +     DP
Sbjct: 274 GYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDP 333

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T+NT+IN L +      A  +  +MV+     C PD  T+N++I  LC    +++A 
Sbjct: 334 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRG---CLPDTTTFNTLIVALCSQNRLEEAL 390

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  ++  + ++P+V T+N LI   C V D      LF EM  +G  PD VT+N +I++ 
Sbjct: 391 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHL 450

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  GK+     LL+ M   G    TVTYN+++D  C   RI  A E+F  M + G     
Sbjct: 451 CSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSA 510

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            ++N LI+  CK ++++DA  L  +M+ E ++PS ITYN++L+   + G+L  A  +++ 
Sbjct: 511 VTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILET 570

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  N    D  T+ T I+GLCK G    A+++ + +R        + YN +I  L +   
Sbjct: 571 MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNN 630

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK-EGQMDKANDLLLDMEAKNCVPSEVTFC 543
           L+ A  LF  +   G  PD +T   +   LC+  G + +A D L++M  K  +P   +F 
Sbjct: 631 LRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFR 690

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS---KDKKYRECLNQFRH 600
            L  G +       ++      +A +L++         V  +    K +KY + L  F  
Sbjct: 691 MLAEGLLNLGMDDYLI------SAIELIIEKAKFRESDVSAIRGYLKIRKYYDALATFGR 744

Query: 601 LL 602
           LL
Sbjct: 745 LL 746



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/511 (30%), Positives = 254/511 (49%), Gaps = 5/511 (0%)

Query: 92  AKNKQYDTVVSLFK-RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
           A+ +++D  V L + +LN+ G+  D  V N L+N L +         V   +      P+
Sbjct: 135 ARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPD 194

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
            VT N LI  LC   ++  A  + ++++  A  P+  TF TL+ G     +   AL++  
Sbjct: 195 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKT 254

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           +M+ E G  C P  VT N +I+G CK G V+ A   + +       P+ +TYN+ +   C
Sbjct: 255 KMM-ETG--CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLC 311

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                  A  +   M+  G  PDV T+N +IN   K+G++D+   ++  M+ RG  PDT 
Sbjct: 312 QNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 371

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           T+N+L+   C   R+  A +L   +  KG   DVY++NILINA CK       + L+ EM
Sbjct: 372 TFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 431

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
            S    P  +TYN L+  L  +G L +AL L+ +M+ N     + T+ T ID LCK   +
Sbjct: 432 KSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRI 491

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            EA +VF  +          T+N LI+GLCK  R+  A +L  ++  +G  P  +T +++
Sbjct: 492 EEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSI 551

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           +   CK+G + KA D+L  M A       VT+ TL+ G  +  +    + LL  M  + +
Sbjct: 552 LTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 611

Query: 571 VVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             +  + +  V+  L +    R+ L+ FR +
Sbjct: 612 RPTPKAYNP-VIQSLFRRNNLRDALSLFREM 641



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 230/486 (47%), Gaps = 42/486 (8%)

Query: 35  DLSSHHFK-DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK 93
           ++SSH    D T+    +    + G+I +  A+     M++   SP   +  +L+    K
Sbjct: 220 EMSSHAVAPDETTFTTLMQGFIEEGSIEA--ALRVKTKMMETGCSPTRVTVNVLINGYCK 277

Query: 94  NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVT 153
             + +  +   ++  ++G  PD    N  ++CLC+ G  S A  V+  +L+    P+  T
Sbjct: 278 MGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFT 337

Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL--------------------- 192
           +N +IN L   G + EA  +  ++    C P+  TFNTL                     
Sbjct: 338 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELT 397

Query: 193 --------------INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                         IN LC+  +  + ++LFEEM +   + C PD VTYN +ID LC  G
Sbjct: 398 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS---SGCAPDEVTYNILIDHLCSMG 454

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +  A +LL +M+      + +TYN++I   C     +EA+ +F +M  +G+    VTFN
Sbjct: 455 KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFN 514

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I+  CK  ++D    L+E M++ G+ P  +TYNS++  +C  G + +A ++  +M + 
Sbjct: 515 TLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTAN 574

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   DV +Y  LIN  CK  + + A+ L R M  + IRP+   YN ++  LF+  NL DA
Sbjct: 575 GFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDA 634

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGF-VLEAVQVFQAIRNCKCELRIETYNCLIN 477
           L L  +M      PD+ T+     GLC+ G  + EA      + N        ++  L  
Sbjct: 635 LSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAE 694

Query: 478 GLCKMG 483
           GL  +G
Sbjct: 695 GLLNLG 700



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 232/483 (48%), Gaps = 18/483 (3%)

Query: 21  NFWCSFGRPPNP----KTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           N +C  GR  +     + +++     D  +   F++   ++G+++   A+   D M++  
Sbjct: 273 NGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVS--HALKVMDLMLQEG 330

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
             P + ++  ++  L+KN + D    +  ++   G  PD    N LI  LC       A 
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEAL 390

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +   +     +P+  TFN LIN LC  G      RLF+++    C P+ VT+N LI+ L
Sbjct: 391 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHL 450

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C     + AL L +EM +     C    VTYN+IID LCK   +++A+E+  QM    I+
Sbjct: 451 CSMGKLVNALDLLKEMESNG---CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGIS 507

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
            + +T+N+LI G C      +A  L  +M+  G+QP  +T+N+++ + CK G + K   +
Sbjct: 508 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADI 567

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           LE M   G   D VTY +L++G C  GR   A +L   M  KG R    +YN +I +  +
Sbjct: 568 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 627

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN-LGDALKLIDKMQLNDVVPDSF 435
              + DA+ L+REM      P  +TY  +  GL + G  + +A   + +M     +P+  
Sbjct: 628 RNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFS 687

Query: 436 TFATYIDGLCKNG---FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           +F    +GL   G   +++ A+++       K + R E+    I G  K+ +   A   F
Sbjct: 688 SFRMLAEGLLNLGMDDYLISAIELIIE----KAKFR-ESDVSAIRGYLKIRKYYDALATF 742

Query: 493 HRL 495
            RL
Sbjct: 743 GRL 745



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 222/470 (47%), Gaps = 4/470 (0%)

Query: 122 LINCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           L+  L +      A  +L   L R  F P+   +  +I  L   G       L +++   
Sbjct: 59  LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRRE 118

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
             +       + +    R R    A+ L    +N FG   + D   YN +++ L +   +
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFG--VQADTAVYNHLLNVLAEGSRM 176

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
              + +  +M DR I P+V+T N+LI   C     + A  +  EM  + V PD  TF  +
Sbjct: 177 KLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTL 236

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +    ++G ++   R+   M++ G +P  VT N L++G+C +GR+  A       ++ G 
Sbjct: 237 MQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGF 296

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D  +YN  ++  C++  V  A+ +   ML E   P V TYNT+++ L + G L +A  
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKG 356

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           ++++M     +PD+ TF T I  LC    + EA+ + + +        + T+N LIN LC
Sbjct: 357 IVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 416

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K+G      +LF  ++  G  PD VT + +I  LC  G++  A DLL +ME+  C  S V
Sbjct: 417 KVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTV 476

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           T+ T++    +  +  +   +  +M A  +  S ++ ++ ++D L K K+
Sbjct: 477 TYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNT-LIDGLCKAKR 525


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 156/456 (34%), Positives = 242/456 (53%), Gaps = 9/456 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFK-RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           LL  L K +++     +F+  L       +    N LI   CK G    AF +L  +   
Sbjct: 75  LLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKER 134

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
             +P+ VT + ++  LC  G +  A + F++     C P+ V FN L++GLC+      A
Sbjct: 135 GHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQLSEA 192

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
            ++ EEM +E G +  PDVVTYNS+IDGLCK   +++A++LL  M  R + PN++TYN+L
Sbjct: 193 RQMIEEM-SERGIV--PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTL 249

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G+C       A  L   M+ +G  PDVVTFN++I+  C+  K+DK   +L LM +   
Sbjct: 250 IYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLC 309

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P+ VTYN L+ G C  GR + A EL   M  +G   D+ +YN LI   C++ ++E A  
Sbjct: 310 APNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQ 369

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           +   M+   + P  I+Y TL   L +     +A  L+D M     +P+ FTF + ++GLC
Sbjct: 370 IQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLC 429

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
            +  + EA  +   +R   C+    TY  L+ GLCK GR+  A ++   +  +G  P V 
Sbjct: 430 CSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVS 489

Query: 506 TCSTMIHWLCKEGQMDKA---NDLLLDMEAKNCVPS 538
           +  T++H L +EG+ D A    D ++  E+K C PS
Sbjct: 490 SSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPS 525



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 190/369 (51%), Gaps = 7/369 (1%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           +GN++   A+ +F   ++  P   +  F IL+  L K  Q      + + ++  G+ PD+
Sbjct: 153 TGNLS--RAMQYFRESVECAPDSVL--FNILVHGLCKANQLSEARQMIEEMSERGIVPDV 208

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              N LI+ LCK      A  +L  +++    PN VT+N LI G C  G    A +L ++
Sbjct: 209 VTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIER 268

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P+VVTFN+LI+G C+      A ++   M      +C P++VTYN +I GLC 
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKK---GLCAPNLVTYNVLISGLCD 325

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G  ++A ELL +M  R I P++ITYNSLI  FC     ++A  +   M++ GV PD ++
Sbjct: 326 AGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGIS 385

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +     K  + D+   LL+ M   G  P+  T+NSLM+G C   R+  AR L   M 
Sbjct: 386 YCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMR 445

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             GC     +Y +L+   CK  +V+DA  +   M+SE I+P V +  T++  L + G   
Sbjct: 446 RVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQD 505

Query: 417 DALKLIDKM 425
            AL   D++
Sbjct: 506 LALHYFDQV 514



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 178/345 (51%), Gaps = 3/345 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    + M +    P + ++  L+  L K+ + +    L + +    + P+L   N L
Sbjct: 190 SEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTL 249

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   CK G T  A  ++ R+++S   P+ VTFN LI+G C + +I +A  +   +    C
Sbjct: 250 IYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLC 309

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+VT+N LI+GLC       A +L  EM    G    PD++TYNS+I   C++  +++
Sbjct: 310 APNLVTYNVLISGLCDAGRANEACELLSEM---DGRGILPDIITYNSLIGIFCRNFQIEQ 366

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++   M +R + P+ I+Y +L       + + EA  L   M D G  P++ TFN+++ 
Sbjct: 367 AFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLME 426

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   ++D+   LL +M + G +P   TY  L+ G C  GR+  A+E+ V MVS+G + 
Sbjct: 427 GLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQP 486

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
            V S   +++   ++ K + A+  + ++++   +    +Y  LL 
Sbjct: 487 LVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLE 531



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 163/306 (53%), Gaps = 2/306 (0%)

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           E++      + +T+N +I   CK G M++  +LL  M +RG +PD VT++S++   C  G
Sbjct: 95  ELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTG 154

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            +SRA + F   V   C  D   +NIL++  CK  ++ +A  +  EM    I P V+TYN
Sbjct: 155 NLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYN 212

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +L+ GL +   + +A +L++ M    V P+  T+ T I G CK G    A Q+ + +   
Sbjct: 213 SLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQS 272

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                + T+N LI+G C+  ++  AC++ H ++     P++VT + +I  LC  G+ ++A
Sbjct: 273 GTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEA 332

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            +LL +M+ +  +P  +T+ +L+  F +N +  +   + + M    ++   +S  +  V 
Sbjct: 333 CELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVA 392

Query: 584 LLSKDK 589
           LL  ++
Sbjct: 393 LLKSER 398



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 119/234 (50%), Gaps = 3/234 (1%)

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYR-EMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
           H+ ++ N L+    K ++   A  ++R E+L +    + ITYNTL+ G  + G++  A +
Sbjct: 67  HNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQ 126

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L+ +M+     PD  T ++ +  LC  G +  A+Q F+   + +C      +N L++GLC
Sbjct: 127 LLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVECAPDSVLFNILVHGLC 184

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K  +L  A ++   +  +G +PDVVT +++I  LCK  +M++A  LL  M  +   P+ V
Sbjct: 185 KANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLV 244

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           T+ TL+ G+ +         L+ +M         ++ +S +     K K  + C
Sbjct: 245 TYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 159/533 (29%), Positives = 272/533 (51%), Gaps = 21/533 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI    S  + S+ IL+         +  +  F+ +  N   P++   N +I   CK+  
Sbjct: 194 MIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR 253

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              AF +L  +      PN +T+N +INGLC  GRI E + +  +++     P+ VT+NT
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+NG C+  N   AL L  EM+        PDVVTY S+I+ +CK G +++A E   QM 
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNG---LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMH 370

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R + PN +TY SLI GF       EA  ++ EM+ +G  P +VT+NA++N +C  G+M+
Sbjct: 371 VRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRME 430

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL  M  +G++PD V+Y++++ GFC    + RA ++   MV KG   D  +Y+ LI
Sbjct: 431 EAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLI 490

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              C+ +++ +A  L++EML++ + P   TY +L++G  + G+L +AL L D+M     +
Sbjct: 491 QGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFL 550

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVF----------------QAIRNCKCELRIETYNCL 475
           PD+ T+   I+GL K     EA ++                   I +C  ++  ++   L
Sbjct: 551 PDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCS-DIEFKSVVAL 609

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I G C  G +  A ++F  +  +   P+    + +IH  C++G + KA+ L  +M     
Sbjct: 610 IKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGF 669

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +P  VT   L++         ++ +++  +      +SD  LS  +V +  K+
Sbjct: 670 IPHTVTIIALVKALYSEGMDEQLNLVIRDI-LRSCKLSDAELSKALVQINHKE 721



 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 162/527 (30%), Positives = 278/527 (52%), Gaps = 30/527 (5%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF+ M + +  P + ++  ++    K K+ D    L + +   GL P+L   N++IN LC
Sbjct: 225 FFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLC 284

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           ++G       VL  + R  F P+ VT+N L+NG C  G   +A  L  ++      P+VV
Sbjct: 285 RVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVV 344

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+ +LIN +C+  N   A++ F++M        +P+ VTY S+I+G  + GF+D+A  + 
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQM---HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIW 401

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M      P ++TYN+L+ G C     +EA  L   M   G+ PDVV+++ +I   C+ 
Sbjct: 402 DEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRY 461

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            ++D+  ++   M+++GV+PD +TY+SL+ G C   R++ A +LF  M++K    D ++Y
Sbjct: 462 QELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTY 521

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             LIN  CK+  + +A+ L+ EM+ +   P  +TYN L++GL +     +A +L+ K+  
Sbjct: 522 TSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFY 581

Query: 428 NDVVPDSFTFATYID---------------GLCKNGFVLEAVQVFQAI--RNCKCELRIE 470
           ++ +P+  T+ T I+               G C  G + EA QVF+++  RN K    + 
Sbjct: 582 DESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAV- 640

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            YN +I+G C+ G +  A KL+  +   G IP  VT   ++  L  EG MD+  +L++  
Sbjct: 641 -YNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG-MDEQLNLVIRD 698

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKS----KVVVLLHKMAAEKLVVS 573
             ++C  S+     L +  VQ N K      V  LL +MA +  + S
Sbjct: 699 ILRSCKLSD---AELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPS 742



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 205/377 (54%), Gaps = 4/377 (1%)

Query: 222 PDVVTYNSIIDGL--CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           P V++YN+I+D +  C+   +  A+++  +M    ++ NV +YN LI GFC   + +   
Sbjct: 165 PGVLSYNAILDSIVRCRKPVI-FAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGL 223

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
             F EM  N   P+VVT+N +I   CK  ++D+  +LL  M   G+ P+ +TYN +++G 
Sbjct: 224 RFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGL 283

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C VGRI     +   M  KG   D  +YN L+N  CK      A+ L+ EML   + P V
Sbjct: 284 CRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDV 343

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TY +L++ + + GNL  A++  D+M +  + P+  T+ + I+G  + GF+ EA +++  
Sbjct: 344 VTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDE 403

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +        I TYN L+NG C  GR++ A  L   ++ KG  PDVV+ ST+I   C+  +
Sbjct: 404 MIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +D+A  +  +M  K   P  +T+ +L++G  +  + ++   L  +M  + L+  + + +S
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTS 523

Query: 580 KVVDLLSKDKKYRECLN 596
            +++   K+    E LN
Sbjct: 524 -LINGYCKEGDLNEALN 539



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 230/420 (54%), Gaps = 7/420 (1%)

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLV-ALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           KLN F   P V+++N +++ + R R  ++ A K++ EM+    ++   +V +YN +I G 
Sbjct: 159 KLNGFM--PGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSL---NVFSYNILIRGF 213

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           C  G ++       +M+     PNV+TYN++I  +C +    EA  L   M   G++P++
Sbjct: 214 CAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNL 273

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +T+N +IN  C+ G++++ + +L  M ++G  PD VTYN+L++G+C VG   +A  L   
Sbjct: 274 LTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSE 333

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M+  G   DV +Y  LIN  CK   +  A+  + +M    +RP+ +TY +L++G  Q G 
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGF 393

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           + +A ++ D+M  +   P   T+   ++G C +G + EA+ + + +        + +Y+ 
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +I G C+   L  A ++   +  KG  PD +T S++I  LC++ ++++A DL  +M  K+
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            +P E T+ +L+ G+ +    ++ +  LH    +K  + D    + +++ L+K  + RE 
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALN-LHDEMIKKGFLPDTVTYNVLINGLNKQARTREA 572



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 206/412 (50%), Gaps = 24/412 (5%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFK----DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           N  C  GR       L+    K    DG +    +N   K GN   ++A+     M++  
Sbjct: 281 NGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNF--HQALVLHSEMLRNG 338

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
             P + ++T L+  + K    +  +  F +++  GL P+      LIN   + G    A+
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAY 398

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +   ++RS F P  VT+N L+NG C  GR+ EA  L + +      P+VV+++T+I G 
Sbjct: 399 RIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGF 458

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR +    A ++  EMV E G    PD +TY+S+I GLC+   +++A +L  +M ++++ 
Sbjct: 459 CRYQELDRAFQMNAEMV-EKGV--SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+  TY SLI G+C   D  EA  L  EM+  G  PD VT+N +IN   K  +  +  RL
Sbjct: 516 PDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRL 575

Query: 317 LELMIQRGVNPDTVTYNSLMD---------------GFCLVGRISRARELFVSMVSKGCR 361
           L  +      P+ +TY++L++               GFC+ G ++ A ++F SM+ +  +
Sbjct: 576 LLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQK 635

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            +   YN++I+ +C+D  V  A  LY+EM+     P  +T   L+  L+  G
Sbjct: 636 PNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG 687


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 159/511 (31%), Positives = 265/511 (51%), Gaps = 4/511 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+    + ++       F+ L S GL   +   N L+  L K+G    A+ +   ++
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           RS    N  T N +IN LC   +I         +      P+VVT+NTLIN  CR     
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A +L + M    G   KP V TYN+II+GLCK G   +AK +L +M    ++P+  TYN
Sbjct: 411 EAFELMDSMS---GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 467

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            L+   C  D+  +A+ +F EM   GV PD+V+F+A+I    K+G +D+  +    M   
Sbjct: 468 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 527

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD V Y  L+ GFC  G +S A ++   M+ +GC  DV +YN ++N  CK++ + +A
Sbjct: 528 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEA 587

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+ EM    + P   T+ TL++G  + GN+  A+ L + M   ++ PD  T+ T IDG
Sbjct: 588 DELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 647

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK   + +  +++  + + +      +Y  LING C MG +  A +L+  +  KG    
Sbjct: 648 FCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 707

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           ++TC+T++   C+ G   KA++ L +M  K  VP  +T+ TL+ GF++     +   L++
Sbjct: 708 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 767

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           KM    L + D+   + +++  S+  + +E 
Sbjct: 768 KMENSGL-LPDVITYNVILNGFSRQGRMQEA 797



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 258/492 (52%), Gaps = 3/492 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++  L KN++ +   S    +   G+FPD+   N LIN  C+ G+   AF ++  +
Sbjct: 360 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 419

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P   T+N +INGLC  G+ + A  +  ++      P+  T+N L+   CR  N 
Sbjct: 420 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 479

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           + A ++F+EM ++ G +  PD+V+++++I  L K+G +D+A +    MK+  + P+ + Y
Sbjct: 480 MDAERIFDEMPSQ-GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 536

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             LI GFC      EA  +  EM++ G   DVVT+N ++N  CK+  + + + L   M +
Sbjct: 537 TILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTE 596

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RGV PD  T+ +L++G+   G +++A  LF  M+ +  + DV +YN LI+  CK  ++E 
Sbjct: 597 RGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 656

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
              L+ +M+S RI P+ I+Y  L++G   +G + +A +L D+M          T  T + 
Sbjct: 657 VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVK 716

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G C+ G  ++A +    +          TYN LING  K   +  A  L +++++ G +P
Sbjct: 717 GYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP 776

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           DV+T + +++   ++G+M +A  ++L M  +   P   T+ +L+ G V  N   +   + 
Sbjct: 777 DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 836

Query: 563 HKMAAEKLVVSD 574
            +M     V  D
Sbjct: 837 DEMLQRGFVPDD 848



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 197/370 (53%), Gaps = 3/370 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   FD M      P + SF+ L+ +L+KN   D  +  F+ + + GL PD  +  +LI
Sbjct: 481 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 540

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+ G+ S A  V   +L      + VT+N ++NGLC E  + EA  LF ++      
Sbjct: 541 GGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 600

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+  TF TLING  +  N   A+ LFE M+       KPDVVTYN++IDG CK   ++K 
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN---LKPDVVTYNTLIDGFCKGSEMEKV 657

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            EL   M  R I PN I+Y  LI G+C +    EA  L+ EM++ G +  ++T N ++  
Sbjct: 658 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 717

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G   K +  L  M+ +G+ PD +TYN+L++GF     + RA  L   M + G   D
Sbjct: 718 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 777

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN+++N   +  ++++A  +  +M+   + P   TY +L++G     NL +A ++ D
Sbjct: 778 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 837

Query: 424 KMQLNDVVPD 433
           +M     VPD
Sbjct: 838 EMLQRGFVPD 847



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 235/487 (48%), Gaps = 9/487 (1%)

Query: 21  NFWCSFGRPPNPKTDLSSHH----FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           N  C   +  N K+ LS       F D  +    +N   + G +   EA    D M    
Sbjct: 366 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL--EEAFELMDSMSGKG 423

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
             P + ++  ++  L K  +Y     +   +   G+ PD    N+L+   C+      A 
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 483

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +   +      P+ V+F+ LI  L   G + +A + F+ +      P+ V +  LI G 
Sbjct: 484 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 543

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR      ALK+ +EM+ +    C  DVVTYN+I++GLCK+  + +A EL  +M +R + 
Sbjct: 544 CRNGVMSEALKVRDEMLEQG---CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 600

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+  T+ +LI G+    +  +A  LF  M+   ++PDVVT+N +I+  CK  +M+KVN L
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 660

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              MI R + P+ ++Y  L++G+C +G +S A  L+  MV KG    + + N ++   C+
Sbjct: 661 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 720

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
                 A      ML + I P  ITYNTL++G  +  N+  A  L++KM+ + ++PD  T
Sbjct: 721 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 780

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   ++G  + G + EA  +   +          TY  LING      LK A ++   + 
Sbjct: 781 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 840

Query: 497 HKGPIPD 503
            +G +PD
Sbjct: 841 QRGFVPD 847



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 208/395 (52%), Gaps = 3/395 (0%)

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C  N + F+ L+    + R      + F  + ++   +C   +   NS++ GL K G+VD
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK--GLC-VSINACNSLLGGLVKVGWVD 340

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A E+  ++    +  NV T N +I   C     +  K    +M + GV PDVVT+N +I
Sbjct: 341 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 400

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N  C+ G +++   L++ M  +G+ P   TYN++++G C  G+  RA+ +   M+  G  
Sbjct: 401 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 460

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YNIL+   C++  + DA  ++ EM S+ + P +++++ L+  L + G L  ALK 
Sbjct: 461 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 520

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
              M+   + PD+  +   I G C+NG + EA++V   +    C L + TYN ++NGLCK
Sbjct: 521 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCK 580

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              L  A +LF  +  +G  PD  T +T+I+   K+G M+KA  L   M  +N  P  VT
Sbjct: 581 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVT 640

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           + TL+ GF + ++  KV  L + M + ++  + +S
Sbjct: 641 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 675



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 158/352 (44%), Gaps = 35/352 (9%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
           N   N + ++ L+  +      +E    F  +   G+   +   N+++    K G +D  
Sbjct: 283 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 342

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             + + +++ GV  +  T N +++  C   +I   +     M  KG   DV +YN LINA
Sbjct: 343 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG-------------------- 413
            C+   +E+A  L   M  + ++P V TYN +++GL + G                    
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462

Query: 414 ---------------NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
                          N+ DA ++ D+M    VVPD  +F+  I  L KNG + +A++ F+
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            ++N         Y  LI G C+ G +  A K+   +  +G   DVVT +T+++ LCKE 
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            + +A++L  +M  +   P   TF TL+ G+ ++   +K V L   M    L
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL 634


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/489 (30%), Positives = 247/489 (50%), Gaps = 32/489 (6%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++  L K+++++ V+     +   G+F D+   N LIN  C+ G+   AF +L   
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P  +T+N ++ GLC  G+   A  +  ++      PN  T+NTL+  +CR  N 
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 203 LVALKLFEEMVNE------------FGAICK--------------------PDVVTYNSI 230
           L A ++F+EM                G + +                    PD V Y  +
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           IDG C++G +  A ++  +M  R    +V+TYN+ + G C    + +A  LF EM++ G+
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PD  TF  +I   CKDG MDK   L E M++  + PD VTYN+L+DGFC  G + RA+E
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           L+  M+ K    D  SY  ++N  C    + +A+ L  +ML + IRP+++T NTL+ G  
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + G++  A + + KM  N ++PDSF++ T IDG  K   + +A  +   +     +  I 
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYN ++NG C  G+++ A ++  ++   G  PD  T S++I+    +  M +A     +M
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738

Query: 531 EAKNCVPSE 539
             +  VP +
Sbjct: 739 LQRGLVPDD 747



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 258/541 (47%), Gaps = 40/541 (7%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + +L+    + K+       F+ L   G+   +   N L+  L + G    A+ + G ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R     N  T N ++N LC + +          +       ++VT+NTLIN  CR     
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 204 VALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            A +L    +N F +   +P ++TYN+I+ GLCK G  D+AK++L++M    + PN  TY
Sbjct: 310 EAFQL----LNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN--------YN---------- 304
           N+L+   C  D+  EA+ +F EM   GV PD+V+F+++I         Y           
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425

Query: 305 -----------------CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
                            C++G +    ++ + M+ RG   D VTYN+ ++G C     + 
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFAD 485

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A  LF  MV +G   D Y++  LI   CKD  ++ A+ L+  M+   ++P  +TYNTL+ 
Sbjct: 486 ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G  + G +G A +L D M   D++PD  ++ T ++G C +G + EA+ +   +       
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + T N LI G C+ G +  A +   ++   G IPD  + +T+I    KE  ++KA  L+
Sbjct: 606 NLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILI 665

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            +ME +    + +T+  +L GF    K  +   +L KM    +     + SS +   +S+
Sbjct: 666 NEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQ 725

Query: 588 D 588
           D
Sbjct: 726 D 726



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 250/491 (50%), Gaps = 8/491 (1%)

Query: 91  LAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
           +++ K  ++++S      S GL  DL V   +     + G  S AF +L    R   + +
Sbjct: 167 VSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREG--SEAFQIL---RRKGVSVS 221

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
               N L+ GL   G +  A  ++ ++     + NV T N ++N LC+ R     +    
Sbjct: 222 INACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLS 281

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           +M    G     D+VTYN++I+  C++G V++A +LL     R + P ++TYN+++ G C
Sbjct: 282 DME---GKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            +  +  AK + IEM+  G+ P+  T+N ++   C+   + +   + + M +RGV PD V
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           +++SL+      G + +A   F  M   G   D   Y ILI+  C++  + DA+ +  EM
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           L+      V+TYNT L+GL +     DA  L ++M    +VPD +TF T I G CK+G +
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            +A+ +F+A+     +    TYN LI+G CK G +  A +L+  +  K  IPD ++  T+
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           ++  C  G + +A +L   M  K   P+ VT  TL++G+ ++    K    L KM +  +
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI 638

Query: 571 VVSDLSLSSKV 581
           +    S ++ +
Sbjct: 639 IPDSFSYNTLI 649



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 5/238 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+  ++A+  F+ M++    P   ++  L+    K  +      L+  +    + PD
Sbjct: 514 KDGNM--DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 ++N  C  G+   A  +  ++L     PN VT N LI G C  G + +A     
Sbjct: 572 HISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLS 631

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+      P+  ++NTLI+G  +  N   A  L  EM        + +++TYN I++G C
Sbjct: 632 KMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG---LQFNIITYNLILNGFC 688

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            +G + +A+++L +M +  INP+  TY+SLI G    D+ KEA     EM+  G+ PD
Sbjct: 689 AEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 117/236 (49%), Gaps = 3/236 (1%)

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y++L+    + +K+ +    ++ +  + +  S+   N LL GL + G +  A ++  ++ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR-IETYNCLINGLCKMGRL 485
              +  + +T    ++ LCK+    E V  F +    K     I TYN LIN  C+ G +
Sbjct: 250 RGGIELNVYTLNIMVNALCKDR-KFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A +L +    +G  P ++T + +++ LCK G+ D+A D+L++M      P+  T+ TL
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L    + +   +   +  +M + + V+ DL   S ++ +L+++    + L  FR +
Sbjct: 369 LVEICRRDNILEAQEIFDEM-SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 6/182 (3%)

Query: 33  KTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLA 92
           + D+   H   GT +  F +    SG +   EA+   D M++    P + +   L+    
Sbjct: 565 RKDIIPDHISYGTVLNGFCS----SGLLP--EALNLCDQMLEKGIRPNLVTCNTLIKGYC 618

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           ++           ++ SNG+ PD F  N LI+   K      AF+++  + +     N +
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T+N ++NG CAEG++ EA ++ +K+     +P+  T+++LING     N   A +  +EM
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738

Query: 213 VN 214
           + 
Sbjct: 739 LQ 740


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 167/542 (30%), Positives = 267/542 (49%), Gaps = 48/542 (8%)

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           T++  + A    Y+    LF  +    +FPD+   N +++ LC+ G    +  +L ++L+
Sbjct: 181 TVVRGLYAHGHGYNAR-HLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLK 239

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
              + N  T N  I GLC +GR+ EA  L +++  +   P+VVT+NTL+ GLC+      
Sbjct: 240 RGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVA-PDVVTYNTLMRGLCKDSKVQE 298

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A +    M+N+    C PD  TYN+IIDG CK G + +A ELL     +   P+ +TY S
Sbjct: 299 AAQYLGRMMNQG---CIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCS 355

Query: 265 LICGFCCVDDWKEAKCLFIE-----------------------------------MMDNG 289
           LI G C   D + A  LF E                                   M++ G
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             PD+ T+N +IN  CK G +     ++   I +G  PD  T+N+L+DG+C   ++  A 
Sbjct: 416 CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSAL 475

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   M + G   DV +YN ++N  CK  K ++    + EM+ +  RP+ ITYN L+   
Sbjct: 476 QLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 535

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            ++  L +A  +I +M  + +VPD+ +F T I G C+NG +  A  +FQ +         
Sbjct: 536 CKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATA 595

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
           +T+N LI        ++ A K+F  +  KG  PD+ T   ++  LCK   +D+A   L +
Sbjct: 596 DTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAE 655

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD-LLSKD 588
           M +K  VPS  TF  +L     N++ S+ V ++H M         + +  +VVD +LS D
Sbjct: 656 MISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMV-------RMGVVPEVVDTILSTD 708

Query: 589 KK 590
           KK
Sbjct: 709 KK 710



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 253/504 (50%), Gaps = 10/504 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  F+ M      P   ++  ++  L     +D    ++ R+ + G+ PD     + + 
Sbjct: 90  AVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLK 149

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL---NVFA 181
             C  G    A  +L  +           +  ++ GL A G    A  LF ++   +VF 
Sbjct: 150 SFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVF- 208

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V TFN +++ LC+  + + +  L  +++    +  K    T N  I GLC+DG ++
Sbjct: 209 --PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANK---FTCNIWIRGLCEDGRLE 263

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  L+ +M    + P+V+TYN+L+ G C     +EA      MM+ G  PD  T+N +I
Sbjct: 264 EAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTII 322

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK G + +   LL+  + +G  PD VTY SL++G C  G I RA ELF    +K  +
Sbjct: 323 DGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLK 382

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+  YN L+   C+   +  A+ +  EM+ E   P + TYN +++GL ++GN+ DA  +
Sbjct: 383 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVV 442

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ++   +   +PD FTF T IDG CK   +  A+Q+ + +        + TYN ++NGLCK
Sbjct: 443 MNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCK 502

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G+ K   + F  +  KG  P+ +T + +I   CK  Q+++A+ +++ M     VP  V+
Sbjct: 503 AGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVS 562

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
           F TL+ GF +N       +L  K+
Sbjct: 563 FNTLIHGFCRNGDLDGAYLLFQKL 586



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 222/452 (49%), Gaps = 41/452 (9%)

Query: 144 RSCFTPNTVTFNFL--INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL----- 196
           RS   P+++   ++  I      GR+  A   F+++++FAC P    +N +++ L     
Sbjct: 62  RSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAY 121

Query: 197 ------------------------------CRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
                                         C T    VAL+L   + +E G   KP    
Sbjct: 122 HDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSL-SERGCDAKP--AA 178

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y +++ GL   G    A+ L  +M  R++ P+V T+N+++   C   D  E+  L  +++
Sbjct: 179 YCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVL 238

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G+  +  T N  I   C+DG++++   L+E M    V PD VTYN+LM G C   ++ 
Sbjct: 239 KRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQ 297

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A +    M+++GC  D ++YN +I+  CK   +++A  L ++ + +   P  +TY +L+
Sbjct: 298 EAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLI 357

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           +GL   G++  AL+L ++ Q  D+ PD   + + + GLC+ G +L A+QV   +    C 
Sbjct: 358 NGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCH 417

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             I TYN +INGLCKMG +  A  + +    KG +PDV T +T+I   CK  ++D A  L
Sbjct: 418 PDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQL 477

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           +  M      P  +T+ ++L G  +  K  +V
Sbjct: 478 VERMWTYGIAPDVITYNSVLNGLCKAGKAKEV 509



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 203/419 (48%), Gaps = 44/419 (10%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + ++  L+  L K+ +         R+ + G  PD F  N +I+  CK G+   A  
Sbjct: 277 APDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATE 336

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK---------LNVF-------- 180
           +L   +   F P+ VT+  LINGLCAEG I  A  LF +         L V+        
Sbjct: 337 LLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLC 396

Query: 181 ------------------ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK- 221
                              C P++ T+N +INGLC+  N   A  +  +      AI K 
Sbjct: 397 RQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMND------AIVKG 450

Query: 222 --PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             PDV T+N++IDG CK   +D A +L+ +M    I P+VITYNS++ G C     KE  
Sbjct: 451 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVN 510

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
             F EM+  G +P+ +T+N +I   CK  ++++ + ++  M Q G+ PD V++N+L+ GF
Sbjct: 511 ETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGF 570

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  G +  A  LF  +  KG      ++NILI A      ++ A  ++ EM+S+  +P +
Sbjct: 571 CRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDL 630

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            TY  L+ GL +  N+  A   + +M     VP   TF   ++ L  N  V EAV +  
Sbjct: 631 YTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIH 689



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 139/322 (43%), Gaps = 39/322 (12%)

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG----- 338
            +  + +QP    + A I    + G++       E M      P    YN++MD      
Sbjct: 64  HLAPDSLQP---LYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAA 120

Query: 339 ------------------------------FCLVGRISRARELFVSMVSKGCRHDVYSYN 368
                                         FCL GR   A  L  S+  +GC     +Y 
Sbjct: 121 YHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYC 180

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            ++          +A  L+ EML   + P V T+N +L  L Q G++ ++  L+ K+   
Sbjct: 181 TVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKR 240

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            +  + FT   +I GLC++G + EAV + + +        + TYN L+ GLCK  +++ A
Sbjct: 241 GMSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEA 299

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +   R+ ++G IPD  T +T+I   CK G + +A +LL D   K  VP  VT+C+L+ G
Sbjct: 300 AQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLING 359

Query: 549 FVQNNKKSKVVVLLHKMAAEKL 570
                   + + L ++  A+ L
Sbjct: 360 LCAEGDIERALELFNEAQAKDL 381



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 2/236 (0%)

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y   I A  +  ++  AV  +  M      P+   YN ++  L        A K+  +M 
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              V PD+ T    +   C  G    A+++ +++    C+ +   Y  ++ GL   G   
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A  LF  +  +   PDV T + ++H LC++G + ++  LL  +  +    ++ T    +
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           RG  ++ +  + V L+ +M A   V  D+   + ++  L KD K +E       ++
Sbjct: 254 RGLCEDGRLEEAVALVERMGA--YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMM 307


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 142/442 (32%), Positives = 242/442 (54%), Gaps = 16/442 (3%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +LL +L K  +++ +  +++ + SNGL P +     LI+  C+ G    A  +   +   
Sbjct: 152 VLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK 211

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
              P  + +  LI GLC++ +I EA  + + +      PNV T+NTL++G C+  N   A
Sbjct: 212 GIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQA 271

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
           L+L+++M+ E G +  PDVVT+  +IDGLCK G +  A+ L + M   ++ PN+  YNSL
Sbjct: 272 LRLYQDMLGE-GLV--PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSL 328

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I  +C V D  EA  LF+E+    V PDV T++ +I   C   + ++   + E M + G+
Sbjct: 329 IDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGI 388

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             ++VTYNSL+DG C  G++ +A E+   M   G   +V +++ LI+  CK + ++ A+ 
Sbjct: 389 LANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMG 448

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           +Y EM+ + + P V+TY  ++ G  + G++ +ALKL   M  N + P+ +T +  +DGLC
Sbjct: 449 IYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLC 508

Query: 446 KNGFVLEAVQVFQ---AIRNCKCELRIE----------TYNCLINGLCKMGRLKTACKLF 492
           K+G + +A+++F      +  +C +              Y  LI+GLC+ G+   A KLF
Sbjct: 509 KDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLF 568

Query: 493 HRLQHKGPIPDVVTCSTMIHWL 514
             ++  G  PD V    M+  L
Sbjct: 569 SDMRRYGLQPDEVIYVVMLRGL 590



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/431 (32%), Positives = 224/431 (51%), Gaps = 16/431 (3%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK----LNVFACDPNVVTFN 190
           AF  L R+  S FTPN   +  LI  LC    + EA  ++ K    L + AC       N
Sbjct: 101 AFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYHKVGAALTIQAC-------N 151

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
            L+  L +T    +  +++EEM++       P V+T+ ++IDG C+ G + +A+E+  +M
Sbjct: 152 VLLYVLVKTGRFELLWRIYEEMISNG---LSPSVITFGTLIDGCCRQGDLLRAQEMFDEM 208

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
           + + I P VI Y  LI G C  +  +EA+ +   M + GV P+V T+N +++  CK    
Sbjct: 209 RVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANA 268

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
            +  RL + M+  G+ PD VT+  L+DG C  G +  AR LFV+M+      ++  YN L
Sbjct: 269 KQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSL 328

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+A CK   V +A+ L+ E+    + P V TY+ L+ GL  V    +A  + +KM    +
Sbjct: 329 IDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGI 388

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           + +S T+ + IDG CK G + +A+++   +     E  + T++ LI+G CK+  L+ A  
Sbjct: 389 LANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMG 448

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           ++  +  K   PDVVT + MI   CK G M +A  L  DM      P+  T   LL G  
Sbjct: 449 IYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLC 508

Query: 551 QNNKKSKVVVL 561
           ++ K S  + L
Sbjct: 509 KDGKISDALEL 519



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 207/404 (51%), Gaps = 18/404 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA      M ++   P + ++  L+    K       + L++ +   GL PD+    +L
Sbjct: 234 EEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGIL 293

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G    A  +   +++   TPN   +N LI+  C  G + EA  LF +L  F  
Sbjct: 294 IDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEV 353

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V T++ LI GLC    T  A  +FE+M  E G +   + VTYNS+IDG CK+G +DK
Sbjct: 354 SPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKE-GILA--NSVTYNSLIDGCCKEGKMDK 410

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+  QM +  + PNVIT+++LI G+C + + + A  ++ EM+   + PDVVT+ AMI+
Sbjct: 411 ALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMID 470

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV------ 356
            +CK G M +  +L   M+  G+ P+  T + L+DG C  G+IS A ELF   +      
Sbjct: 471 GHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPR 530

Query: 357 -------SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
                  SK    +  +Y  LI+  C+D +   AV L+ +M    ++P  + Y  +L GL
Sbjct: 531 CNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
           FQV  +   + L   M    V+P+S       +   ++GF+  A
Sbjct: 591 FQVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSA 632



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 213/466 (45%), Gaps = 57/466 (12%)

Query: 174 FKKLNVFACDP--NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
           +K L  F   P  N+  ++ +I+ L  ++    A  L  ++V       KP    Y++  
Sbjct: 44  WKALEFFNAAPEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKP----YHA-- 97

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
              C+  F +     L ++K     PNV  Y  LI   C ++  +EA  ++ ++   G  
Sbjct: 98  ---CQLAFSE-----LSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYHKV---GAA 144

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
             +   N ++    K G+ + + R+ E MI  G++P  +T+ +L+DG C  G + RA+E+
Sbjct: 145 LTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEM 204

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M  KG    V  Y ILI   C D K+E+A  ++R M    + P+V TYNTL+ G  +
Sbjct: 205 FDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCK 264

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF---------------------- 449
           + N   AL+L   M    +VPD  TF   IDGLCK G                       
Sbjct: 265 LANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAV 324

Query: 450 -------------VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
                        V EA+ +F  +   +    + TY+ LI GLC + R + A  +F ++ 
Sbjct: 325 YNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMT 384

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +G + + VT +++I   CKEG+MDKA ++   M      P+ +TF TL+ G+ +     
Sbjct: 385 KEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQ 444

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             + +  +M  + L   D+   + ++D   K    +E L  +  +L
Sbjct: 445 AAMGIYSEMVIKSL-SPDVVTYTAMIDGHCKYGSMKEALKLYSDML 489



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 169/325 (52%), Gaps = 16/325 (4%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A+  +  M+     P + +F IL+  L K  +     +LF  +    + P++ V N 
Sbjct: 268 AKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNS 327

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+  CK+G  S A  +   + R   +P+  T++ LI GLC+  R  EA  +F+K+    
Sbjct: 328 LIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEG 387

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              N VT+N+LI+G C+      AL++  +M  E G   +P+V+T++++IDG CK   + 
Sbjct: 388 ILANSVTYNSLIDGCCKEGKMDKALEICSQM-TENGV--EPNVITFSTLIDGYCKIRNLQ 444

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  +  +M  ++++P+V+TY ++I G C     KEA  L+ +M+DNG+ P+  T + ++
Sbjct: 445 AAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLL 504

Query: 302 NYNCKDGKMDKVNRL----LELMIQR------GVNP---DTVTYNSLMDGFCLVGRISRA 348
           +  CKDGK+     L    +E    R      G  P   + V Y +L+ G C  G+ S+A
Sbjct: 505 DGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKA 564

Query: 349 RELFVSMVSKGCRHDVYSYNILINA 373
            +LF  M   G + D   Y +++  
Sbjct: 565 VKLFSDMRRYGLQPDEVIYVVMLRG 589


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 148/489 (30%), Positives = 247/489 (50%), Gaps = 32/489 (6%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++  L K+++++ V+     +   G+F D+   N LIN  C+ G+   AF +L   
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P  +T+N ++ GLC  G+   A  +  ++      PN  T+NTL+  +CR  N 
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 203 LVALKLFEEMVNE------------FGAICK--------------------PDVVTYNSI 230
           L A ++F+EM                G + +                    PD V Y  +
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           IDG C++G +  A ++  +M  R    +V+TYN+ + G C    + +A  LF EM++ G+
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PD  TF  +I   CKDG MDK   L E M++  + PD VTYN+L+DGFC  G + RA+E
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           L+  M+ K    D  SY  ++N  C    + +A+ L  +ML + IRP+++T NTL+ G  
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + G++  A + + KM  N ++PDSF++ T IDG  K   + +A  +   +     +  I 
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYN ++NG C  G+++ A ++  ++   G  PD  T S++I+    +  M +A     +M
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738

Query: 531 EAKNCVPSE 539
             +  VP +
Sbjct: 739 LQRGLVPDD 747



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/489 (31%), Positives = 252/489 (51%), Gaps = 7/489 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + +L+    + K+       F+ L   G+   +   N L+  L + G    A+ + G ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R     N  T N ++N LC + +          +       ++VT+NTLIN  CR     
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 204 VALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            A +L    +N F +   +P ++TYN+I+ GLCK G  D+AK++L++M    + PN  TY
Sbjct: 310 EAFQL----LNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N+L+   C  D+  EA+ +F EM   GV PD+V+F+++I    ++G + +       M +
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G+ PD V Y  L+DGFC  G +S A ++   M+++GC  DV +YN  +N  CK +   D
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFAD 485

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+ EM+   + P   T+ TL+ G  + GN+  AL L + M   ++ PD  T+ T ID
Sbjct: 486 ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545

Query: 443 GLCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           G CK G +  A +++   IR       I +Y  ++NG C  G L  A  L  ++  KG  
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHI-SYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P++VTC+T+I   C+ G M KA + L  M +   +P   ++ TL+ G+++     K  +L
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664

Query: 562 LHKMAAEKL 570
           +++M    L
Sbjct: 665 INEMEKRGL 673



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 205/371 (55%), Gaps = 5/371 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   FD M +    P + SF+ L+ +LA+N      +  F+ +  +G+ PD  +  +LI
Sbjct: 380 EAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILI 439

Query: 124 NCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  C+ G  S A  +   +L R CF  + VT+N  +NGLC +    +A  LF ++     
Sbjct: 440 DGFCRNGALSDALKMRDEMLARGCFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  TF TLI G C+  N   AL LFE MV       KPD VTYN++IDG CK G + +
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR---TNLKPDKVTYNTLIDGFCKAGEMGR 555

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AKEL   M  ++I P+ I+Y +++ GFC      EA  L  +M++ G++P++VT N +I 
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ G M K    L  MI  G+ PD+ +YN+L+DG+     + +A  L   M  +G + 
Sbjct: 616 GYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQF 675

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++ +YN+++N  C + K+++A  + R+M+   I P   TY++L++G     N+ +A +  
Sbjct: 676 NIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFH 735

Query: 423 DKMQLNDVVPD 433
           D+M    +VPD
Sbjct: 736 DEMLQRGLVPD 746



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 250/491 (50%), Gaps = 8/491 (1%)

Query: 91  LAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
           +++ K  ++++S      S GL  DL V   +     + G  S AF +L    R   + +
Sbjct: 167 VSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREG--SEAFQIL---RRKGVSVS 221

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
               N L+ GL   G +  A  ++ ++     + NV T N ++N LC+ R     +    
Sbjct: 222 INACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLS 281

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           +M    G     D+VTYN++I+  C++G V++A +LL     R + P ++TYN+++ G C
Sbjct: 282 DME---GKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            +  +  AK + IEM+  G+ P+  T+N ++   C+   + +   + + M +RGV PD V
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           +++SL+      G + +A   F  M   G   D   Y ILI+  C++  + DA+ +  EM
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           L+      V+TYNT L+GL +     DA  L ++M    +VPD +TF T I G CK+G +
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            +A+ +F+A+     +    TYN LI+G CK G +  A +L+  +  K  IPD ++  T+
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           ++  C  G + +A +L   M  K   P+ VT  TL++G+ ++    K    L KM +  +
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI 638

Query: 571 VVSDLSLSSKV 581
           +    S ++ +
Sbjct: 639 IPDSFSYNTLI 649



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 201/372 (54%), Gaps = 3/372 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+++  +P   ++  LL  + +         +F  ++  G+ PDL   + LI  L + G 
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A +    + RS   P+ V +  LI+G C  G + +A ++  ++    C  +VVT+NT
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
            +NGLC+ +    A  LF EMV E G +  PD  T+ ++I G CKDG +DKA  L   M 
Sbjct: 473 FLNGLCKKKMFADADMLFNEMV-ERGMV--PDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             N+ P+ +TYN+LI GFC   +   AK L+ +M+   + PD +++  ++N  C  G + 
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLP 589

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   L + M+++G+ P+ VT N+L+ G+C  G + +A E    M+S G   D +SYN LI
Sbjct: 590 EALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +   K+  +E A  L  EM    ++ ++ITYN +L+G    G + +A +++ KM    + 
Sbjct: 650 DGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGIN 709

Query: 432 PDSFTFATYIDG 443
           PD  T+++ I+G
Sbjct: 710 PDGATYSSLING 721



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 215/440 (48%), Gaps = 3/440 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    +        PG+ ++  +L  L K  +YD    +   +   GL P+    N L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             +C+      A  +   + R    P+ V+F+ LI  L   G + +A   F+++      
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ V +  LI+G CR      ALK+ +EM+      C  DVVTYN+ ++GLCK      A
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEML---ARGCFMDVVTYNTFLNGLCKKKMFADA 486

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L  +M +R + P+  T+ +LI G+C   +  +A  LF  M+   ++PD VT+N +I+ 
Sbjct: 487 DMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+M +   L + MI++ + PD ++Y ++++GFC  G +  A  L   M+ KG R +
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + + N LI   C+   +  A     +M+S  I P   +YNTL+ G  +  NL  A  LI+
Sbjct: 607 LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILIN 666

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+   +  +  T+   ++G C  G + EA QV + +          TY+ LING     
Sbjct: 667 EMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQD 726

Query: 484 RLKTACKLFHRLQHKGPIPD 503
            +K A +    +  +G +PD
Sbjct: 727 NMKEAFRFHDEMLQRGLVPD 746



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 5/238 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+  ++A+  F+ M++    P   ++  L+    K  +      L+  +    + PD
Sbjct: 514 KDGNM--DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 ++N  C  G+   A  +  ++L     PN VT N LI G C  G + +A     
Sbjct: 572 HISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLS 631

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+      P+  ++NTLI+G  +  N   A  L  EM        + +++TYN I++G C
Sbjct: 632 KMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG---LQFNIITYNLILNGFC 688

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            +G + +A+++L +M +  INP+  TY+SLI G    D+ KEA     EM+  G+ PD
Sbjct: 689 AEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 117/236 (49%), Gaps = 3/236 (1%)

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y++L+    + +K+ +    ++ +  + +  S+   N LL GL + G +  A ++  ++ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR-IETYNCLINGLCKMGRL 485
              +  + +T    ++ LCK+    E V  F +    K     I TYN LIN  C+ G +
Sbjct: 250 RGGIELNVYTLNIMVNALCKDR-KFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A +L +    +G  P ++T + +++ LCK G+ D+A D+L++M      P+  T+ TL
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L    + +   +   +  +M + + V+ DL   S ++ +L+++    + L  FR +
Sbjct: 369 LVEICRRDNILEAQEIFDEM-SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 161/538 (29%), Positives = 279/538 (51%), Gaps = 14/538 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +  A+Y FD M ++   PG+ S + LL  L +  +    V +F ++   G+ PD+++ ++
Sbjct: 172 TKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSI 231

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++N  C++G    A  VL ++++    PN VT+N L+NG    G      R+ + ++   
Sbjct: 232 VVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERG 291

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              NVVT   L+ G C+      A KL  E+  E   +   D   Y  ++DG C+ G ++
Sbjct: 292 VSRNVVTCTMLMRGYCKKGKMDEAEKLLREV--EEDELLVVDERVYGVLVDGYCQMGRME 349

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  +  +M    +  N++  N+LI G+C +    EA+ +F+ M+D  ++PD  ++N ++
Sbjct: 350 DAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLL 409

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C++GK+ K   L E M+  G+ P  VTYN+++ G   VG    A  L+  MV +G  
Sbjct: 410 DGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVT 469

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  S   +++   K    + A+ L++E+L      S + +NT++SGL ++G L +A  +
Sbjct: 470 PNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAV 529

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            D+M+   + PD  T+ T  DG CKNG V EA Q+   +        IE YN LI+GL K
Sbjct: 530 FDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFK 589

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
           + +L     L   +Q +G  P+VVT  T+I   C E ++DKA  L  +M  +   P+ V 
Sbjct: 590 IRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVV 649

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM-----------AAEKLVVSDLSLSS-KVVDLLSK 587
              ++    ++++ S+  V+L KM            ++KLV +DL+L + K+ D L K
Sbjct: 650 CSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDK 707



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 244/533 (45%), Gaps = 45/533 (8%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP-DLFVLNLLINCLCKMGITSGAF 136
           S  + + T+L+    K  + D    L + +  + L   D  V  +L++  C+MG    A 
Sbjct: 293 SRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAV 352

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +   +LR     N V  N LI G C  G++ EA R+F  +  +   P+  ++NTL++G 
Sbjct: 353 RIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGY 412

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR      A  L EEM+   G    P VVTYN++I GL   G  D A  L   M +R + 
Sbjct: 413 CREGKVSKAFMLCEEML---GDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVT 469

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN I+  +++  F  + D   A  L+ E++  G     V FN MI+  CK GK+ +   +
Sbjct: 470 PNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAV 529

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRA---------------------------- 348
            + M + G++PD +TY +L DG+C  G +  A                            
Sbjct: 530 FDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFK 589

Query: 349 -------RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
                   +L V M ++G   +V +Y  LI+  C +QK++ A  LY EM+     P+V+ 
Sbjct: 590 IRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVV 649

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
            + ++S L++   + +A  ++DKM   D++          D L KN   LEA ++  ++ 
Sbjct: 650 CSKIVSSLYRDDRISEATVILDKMLDFDILA---VHNKCSDKLVKNDLTLEAQKIADSLD 706

Query: 462 N---CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
               C        YN  I+GLCK G+L  A  +   L  +G +PD  T  T+IH     G
Sbjct: 707 KSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSG 766

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +D+A  L  +M  K  +P+   +  L+ G  +     +   L +K+  + LV
Sbjct: 767 NVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLV 819



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 215/425 (50%), Gaps = 9/425 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + ++  ++  L     YD  + L+  +   G+ P+      +++C  KMG +  A +
Sbjct: 434 TPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMM 493

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   IL   FT +TV FN +I+GLC  G++MEA  +F ++      P+ +T+ TL +G C
Sbjct: 494 LWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYC 553

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  N   A ++  + V E  A+    +  YNS+IDGL K   ++   +LL++M+ R ++P
Sbjct: 554 KNGNVQEAFQI--KGVMERQAM-SASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSP 610

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV+TY +LI G+C      +A  L+ EM++ G  P+VV  + +++   +D ++ +   +L
Sbjct: 611 NVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVIL 670

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS---YNILINAN 374
           + M+   +      +N   D          A+++  S+      + + +   YNI I+  
Sbjct: 671 DKMLDFDI---LAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGL 727

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK  K+++A  +   ++S    P   TY TL+      GN+ +A KL D+M    ++P+ 
Sbjct: 728 CKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNI 787

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             +   I+GLCK G +  A ++F  +          TYN LI   C++G L  A +L  +
Sbjct: 788 TIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREK 847

Query: 495 LQHKG 499
           +  +G
Sbjct: 848 MTEEG 852



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 201/441 (45%), Gaps = 19/441 (4%)

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
           S + P++++++ L++ L       EA  + ++L    C  N              R   V
Sbjct: 95  SHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNY-------------RAYAV 141

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
              +F  +  EFG  C      ++ ++    + G    A  +  +M      P + + + 
Sbjct: 142 CNHVFS-VYKEFG-FCSG---VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSF 196

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+       + + A  +F +++  G+ PDV   + ++N +C+ G++D    +LE M++ G
Sbjct: 197 LLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEG 256

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + P+ VTYN L++G+   G       +   M  +G   +V +  +L+   CK  K+++A 
Sbjct: 257 LEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAE 316

Query: 385 CLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
            L RE+   E +      Y  L+ G  Q+G + DA+++ D+M    +  +     T I G
Sbjct: 317 KLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKG 376

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK G V EA +VF  + +   +    +YN L++G C+ G++  A  L   +   G  P 
Sbjct: 377 YCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPT 436

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           VVT +T+I  L   G  D A  L   M  +   P+E++ CT+L  F +     + ++L  
Sbjct: 437 VVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWK 496

Query: 564 KMAAEKLVVSDLSLSSKVVDL 584
           ++       S ++ ++ +  L
Sbjct: 497 EILGRGFTKSTVAFNTMISGL 517



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 166/374 (44%), Gaps = 38/374 (10%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S+ A+  +  ++    +    +F  +++ L K  +     ++F R+   GL PD      
Sbjct: 488 SDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRT 547

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L +  CK G    AF + G + R   + +   +N LI+GL    ++ +   L  ++    
Sbjct: 548 LSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRG 607

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PNVVT+ TLI+G C  +    A  L+ EM+ E G    P+VV  + I+  L +D  + 
Sbjct: 608 LSPNVVTYGTLISGWCDEQKLDKAFHLYFEMI-ERGF--TPNVVVCSKIVSSLYRDDRIS 664

Query: 242 KAKELLLQMKDRNINP-----------------------------------NVITYNSLI 266
           +A  +L +M D +I                                     N I YN  I
Sbjct: 665 EATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAI 724

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C      EA+ +   +M  G  PD  T+  +I+     G +D+  +L + M+++G+ 
Sbjct: 725 DGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLI 784

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P+   YN+L++G C +G I RA+ LF  +  KG   +  +YNILI   C+   ++ A  L
Sbjct: 785 PNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRL 844

Query: 387 YREMLSERIRPSVI 400
             +M  E I   +I
Sbjct: 845 REKMTEEGISTRII 858



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 149/306 (48%), Gaps = 9/306 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN+   EA      M +   S  +  +  L+  L K ++ + V  L   + + GL P+
Sbjct: 554 KNGNV--QEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPN 611

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI+  C       AF +   ++   FTPN V  + +++ L  + RI EA  +  
Sbjct: 612 VVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILD 671

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP--DVVTYNSIIDG 233
           K+  F     +   N   + L +   TL A K+ + +  +   IC    + + YN  IDG
Sbjct: 672 KMLDFDI---LAVHNKCSDKLVKNDLTLEAQKIADSL--DKSDICNSLSNNIVYNIAIDG 726

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK G +D+A+ +L  +  R   P+  TY +LI       +  EA  L  EM++ G+ P+
Sbjct: 727 LCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPN 786

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           +  +NA+IN  CK G +D+  RL   + Q+G+ P+ VTYN L+  +C +G + +A  L  
Sbjct: 787 ITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLRE 846

Query: 354 SMVSKG 359
            M  +G
Sbjct: 847 KMTEEG 852


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 160/525 (30%), Positives = 278/525 (52%), Gaps = 26/525 (4%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF  M +    P + ++  ++    K K+ D      + +   GL P+L   N++IN LC
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           + G       VL  + R  + P+ VT+N L+NG C EG   +A  L  ++      PNVV
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+ +LIN +C+  N   A++ F++M      +C P+  TY +II+G  + G +D+A  +L
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQM--HVRGLC-PNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M      P+++TYN+LI G C +   +EA  L  +M+  GV PDVV+++ +I+   ++
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            ++D+  ++   MI + V PD VTY+SL+ G C   R++ A ++F  M++     D ++Y
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             LINA CK+  +  A+ L+ EM+ +   P  +TYN L++GL +     +A +L+ K+  
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFY 361

Query: 428 NDVVPDSFTFATYID---------------GLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           +D +P + T+ T I+               G C  G + EA QVF+++ N   +     Y
Sbjct: 362 DDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIY 421

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N +I+G C++G +  A KL+  + H   +P  VT   ++  L  EG   + N+++ D+  
Sbjct: 422 NVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDI-L 480

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSK----VVVLLHKMAAEKLVVS 573
           ++C   ++T   L +  V+ N+K      V  LL +MA + L+ S
Sbjct: 481 RSC---KLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPS 522



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/376 (33%), Positives = 216/376 (57%), Gaps = 3/376 (0%)

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
           R FK++    C PNVVT+NT+I+G C+ + T  A      M  +     +P+++T+N II
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKG---LEPNLITFNMII 60

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           +GLC+DG + +  E+L++M  +   P+ +TYN+L+ G+C   ++ +A  L  EM+ NG+ 
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           P+VVT+ ++IN  CK G +++     + M  RG+ P+  TY ++++GF   G +  A  +
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              M   G    + +YN LIN +C   ++E+A+ L ++M+ + + P V++Y+T++SG  +
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
              L  A ++  +M    V+PD+ T+++ I GLC+   + EA  +FQ +   K      T
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFT 300

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y  LIN  CK G L  A  L   +  KG +PD VT + +I+ L K+ +  +A  LLL + 
Sbjct: 301 YTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLF 360

Query: 532 AKNCVPSEVTFCTLLR 547
             + +PS VT+ TL+ 
Sbjct: 361 YDDSIPSAVTYNTLIE 376



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 197/376 (52%), Gaps = 3/376 (0%)

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           + L+ F+EM       C P+VVTYN++IDG CK    D+A   L  M  + + PN+IT+N
Sbjct: 1   MGLRFFKEMERNG---CLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFN 57

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            +I G C     KE   + +EM   G  PD VT+N ++N  CK+G   +   L   M++ 
Sbjct: 58  MIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRN 117

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G++P+ VTY SL++  C  G ++RA E F  M  +G   +  +Y  +IN   +   +++A
Sbjct: 118 GLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEA 177

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             +  EM      PS++TYN L++G   +G + +A+ L+  M    V+PD  +++T I G
Sbjct: 178 YRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG 237

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             +N  +  A Q+   +          TY+ LI GLC+  RL  AC +F  +      PD
Sbjct: 238 FARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPD 297

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
             T +T+I+  CKEG ++KA  L  +M  K  +P  VT+  L+ G  +  +  +   LL 
Sbjct: 298 EFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLL 357

Query: 564 KMAAEKLVVSDLSLSS 579
           K+  +  + S ++ ++
Sbjct: 358 KLFYDDSIPSAVTYNT 373



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 176/406 (43%), Gaps = 55/406 (13%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           +    +N   K+GN+  N A+ FFD M      P   ++T ++   A+    D    +  
Sbjct: 125 TYTSLINSMCKAGNL--NRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMG--------------------------ITSG----- 134
            +  +G  P +   N LIN  C +G                          I SG     
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242

Query: 135 ----AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
               AF +   ++     P+ VT++ LI GLC + R+ EA  +F+++      P+  T+ 
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           TLIN  C+  +   AL L +EM+ + G +  PD VTYN +I+GL K     +A+ LLL++
Sbjct: 303 TLINAYCKEGDLNKALHLHDEMIQK-GFL--PDAVTYNVLINGLNKQARSKEARRLLLKL 359

Query: 251 KDRNINPNVITYNSLI---C------------GFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
              +  P+ +TYN+LI   C            GFC      EA  +F  M++   +P+  
Sbjct: 360 FYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEA 419

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            +N +I+ +C+ G + K  +L + M+     P TVT  +L+      G      E+   +
Sbjct: 420 IYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDI 479

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           +      D     +L+  N K+  ++    L  EM  + + PS  T
Sbjct: 480 LRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 161/540 (29%), Positives = 270/540 (50%), Gaps = 8/540 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EAV  F+ + +    P   ++T L+    +N++ D    +F R+  +G  P+    + L
Sbjct: 214 QEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTL 273

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LC  G    A  +L  +      P   T+   I+ LC  GR+ +A  L + +    C
Sbjct: 274 INGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGC 333

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V T+  +I+GL R     +A+ ++ +M+ E G +  P+ VTYN++I+ LC +G    
Sbjct: 334 SPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE-GLV--PNTVTYNALINELCTEGRFGI 390

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++   M+      N  TYN +I G   +DD ++A  +F +M+ +G  P VVT+N +I 
Sbjct: 391 ALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIV 450

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
            N K G ++   R L +M +    PD  TY  L+ GFC  G++  A   F  M+  G   
Sbjct: 451 ENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISP 510

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           + ++Y  +I+  CK+ K++ A+ L+  M       S+ TYN ++SGL +     +A K  
Sbjct: 511 NQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFC 570

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            KM    + P++ T+ + I+GLCKN     A ++F  +    C     TY  LI GLC+ 
Sbjct: 571 AKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQE 630

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G++  A     RL   G  P + T ST++  LC+EG+ ++A+ L+ +M+ K   PS   +
Sbjct: 631 GKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIY 686

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           C+LL    ++ K    + + + MA  K     L +   ++  L    +  E LN F+ LL
Sbjct: 687 CSLLVAHCKSLKVDCALEIFNLMAV-KGFQPHLFIYKVLICALCGVSRAEEALNIFQSLL 745



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 148/483 (30%), Positives = 242/483 (50%), Gaps = 39/483 (8%)

Query: 108 NSNGLFP-DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           + +GLF   L+  N L+  L K  + + A  V  +I  S   P+ +TFN +IN LC +G+
Sbjct: 153 SDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGK 212

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           + EA  +F K+  F   P+  T+ +LI G CR R    A ++F+ MV +    C P+ VT
Sbjct: 213 VQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDG---CNPNSVT 269

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+++I+GLC +G + +A ++L +M ++ I P V TY   I   C +    +A  L   M 
Sbjct: 270 YSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMG 329

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G  P V T+ A+I+   + GKM+    +   M++ G+ P+TVTYN+L++  C  GR  
Sbjct: 330 KKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFG 389

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT-- 404
            A ++F  M   G   +  +YN +I        +E A+ ++ +ML +   P+V+TYNT  
Sbjct: 390 IALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLI 449

Query: 405 ---------------------------------LLSGLFQVGNLGDALKLIDKMQLNDVV 431
                                            L+SG  + G L  A     +M    + 
Sbjct: 450 VENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGIS 509

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+ +T+   IDG CK G +  A+ +F+ +    C   IETYN +I+GL K  R   A K 
Sbjct: 510 PNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKF 569

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
             ++  +G  P+ +T +++I+ LCK    + A  +  +ME KNC+P+  T+ +L+ G  Q
Sbjct: 570 CAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ 629

Query: 552 NNK 554
             K
Sbjct: 630 EGK 632



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 240/519 (46%), Gaps = 42/519 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+   + M +    P + ++T+ ++ L    + D  ++L + +   G  P +     +I
Sbjct: 285 EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAII 344

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L + G    A  +  ++L+    PNTVT+N LIN LC EGR   A ++F  +      
Sbjct: 345 SGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTL 404

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            N  T+N +I GL    +   A+ +F +M+ +  +   P VVTYN++I    K G+++ A
Sbjct: 405 ANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPS---PTVVTYNTLIVENLKRGYLNNA 461

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
              L  MK+ N  P+  TY  LI GFC       A   F EM+  G+ P+  T+ AMI+ 
Sbjct: 462 TRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDG 521

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK+GK+D    L E M + G +    TYN+++ G     R S A +    M  +G + +
Sbjct: 522 YCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPN 581

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y  LIN  CK+     A  ++ EM  +   P+  TY +L+ GL Q G +  A +L +
Sbjct: 582 TITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE 641

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR-----------------NCK-- 464
               N   P   T++T + GLC+ G   EA Q+ + ++                 +CK  
Sbjct: 642 ----NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSL 697

Query: 465 ---CELRIET-------------YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
              C L I               Y  LI  LC + R + A  +F  L  K    D++  +
Sbjct: 698 KVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWT 757

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
            ++  L +EG  D     L  ME++NC PS  T+  L R
Sbjct: 758 VLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILAR 796



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 186/342 (54%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           + ++N+++  L K   V  A+ +  Q+    + P+++T+N++I   C     +EA  +F 
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           ++    + PD  T+ ++I  +C++ K+DK   + + M++ G NP++VTY++L++G C  G
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           RI  A ++   M  KG    VY+Y + I++ C   +V+DA+ L R M  +   PSV TY 
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYT 341

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            ++SGLF+ G +  A+ +  KM    +VP++ T+   I+ LC  G    A+++F  +   
Sbjct: 342 AIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGH 401

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                 +TYN +I GL  M  ++ A  +F+++   GP P VVT +T+I    K G ++ A
Sbjct: 402 GTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNA 461

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
              L  M+  NC P E T+C L+ GF +  K        ++M
Sbjct: 462 TRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEM 503



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 200/399 (50%), Gaps = 9/399 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  F+ M+K  PSP + ++  L+    K    +        +  +   PD      LI
Sbjct: 425 KAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELI 484

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G    A      +L+   +PN  T+  +I+G C EG+I  A  LF+++    C 
Sbjct: 485 SGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCS 544

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            ++ T+N +I+GL +      A K   +M  +     +P+ +TY S+I+GLCK+   + A
Sbjct: 545 ASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG---LQPNTITYTSLINGLCKNTATNLA 601

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE-MMDNGVQPDVVTFNAMIN 302
            ++  +M+ +N  PN  TY SLI G C     +E K    E + +NG +P + T++ +++
Sbjct: 602 FKIFHEMEKKNCLPNAHTYTSLIYGLC-----QEGKVDAAERLTENGCEPTIDTYSTLVS 656

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C++G+ ++ ++L+E M ++G++P    Y SL+   C   ++  A E+F  M  KG + 
Sbjct: 657 GLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQP 716

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            ++ Y +LI A C   + E+A+ +++ +L ++    +I +  L+ GL Q G+    +K +
Sbjct: 717 HLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFL 776

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
             M+  +  P   T+      L K G  +   Q+   +R
Sbjct: 777 YLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLR 815



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 200/468 (42%), Gaps = 42/468 (8%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+  +  M+K    P   ++  L+  L    ++   + +F  +  +G   +    N +I 
Sbjct: 356 AIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIK 415

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLI-------------------------- 158
            L  M     A VV  ++L+   +P  VT+N LI                          
Sbjct: 416 GLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEP 475

Query: 159 ---------NGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
                    +G C  G++  A   F ++      PN  T+  +I+G C+     VAL LF
Sbjct: 476 DERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLF 535

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           E M  E G  C   + TYN+II GL K     +A++   +M ++ + PN ITY SLI G 
Sbjct: 536 ERM-EENG--CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGL 592

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C       A  +F EM      P+  T+ ++I   C++GK+D   RL E     G  P  
Sbjct: 593 CKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE----NGCEPTI 648

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TY++L+ G C  GR + A +L  +M  KG    +  Y  L+ A+CK  KV+ A+ ++  
Sbjct: 649 DTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNL 708

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M  +  +P +  Y  L+  L  V    +AL +   +       D   +   +DGL + G 
Sbjct: 709 MAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGD 768

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
               ++    + +  C   + TY  L   L K+G+     ++ +RL+ 
Sbjct: 769 SDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLRE 816



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 61/142 (42%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           SNEA    + M +   SP M  +  LL    K+ + D  + +F  +   G  P LF+  +
Sbjct: 664 SNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKV 723

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI  LC +     A  +   +L+  +  + + +  L++GL  EG      +    +    
Sbjct: 724 LICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRN 783

Query: 182 CDPNVVTFNTLINGLCRTRNTL 203
           C P++ T+  L   L +   ++
Sbjct: 784 CTPSLHTYIILARELSKVGKSI 805


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 248/453 (54%), Gaps = 8/453 (1%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R+   PN+VTFN L+NG   +GR  +  RL + +      PNVV++N L+ GLC+     
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH 62

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A +L  +M++  G    PD+VTY++++ G CK G V++++ELL ++  R + P+ + Y 
Sbjct: 63  EAEELVRDMISR-GGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYT 121

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            ++   C      EA  L  EM+  G  P ++TFN +I+  C++  ++  + LL+ M   
Sbjct: 122 KVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAAS 181

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           GV  D VTYN+LMDG C  GR+  A +L   M + GC  DV +Y+  +   CK  KV DA
Sbjct: 182 GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDA 241

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP-DSFTFATYID 442
             +  +M      P+V+TYNT+L GL + G +  AL+++++M  +D    +   ++T +D
Sbjct: 242 HQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVD 301

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK G   EA  V +A+    C   + TY+ L+NGLCK G+++ A +    +  +G  P
Sbjct: 302 GLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP 361

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDM-----EAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           + VT  +++H LC  G++ +A  ++ +M        +C PS  T+  L+ G  +  +   
Sbjct: 362 NAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDD 421

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            +    +M ++      +S S+ +V+ L++  +
Sbjct: 422 ALKFFQRMRSQGCDPDGVSYST-IVEGLARSGR 453



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/396 (32%), Positives = 209/396 (52%), Gaps = 17/396 (4%)

Query: 76  KPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
           + +P M +++ LL+   K  + +    L K + S GL PD  +   ++  LCK      A
Sbjct: 77  RSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEA 136

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             +L  ++R+   P  +TFN LI+G C E  +  A  L +K+       +VVT+NTL++G
Sbjct: 137 LELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDG 196

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           LC+      A +L E M     + C PDVV Y+S + GLCK G V  A ++L QM+D + 
Sbjct: 197 LCKAGRLQEAEQLLERM---KASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHH 253

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD-----VVTFNAMINYNCKDGKM 310
           +PNV+TYN+++ G C       A    +EMM+     D     VV ++ +++  CK G+ 
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTA----LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
            +   ++E M + G  PD VTY+SL++G C  G+I  A E    M  +GC+ +  +Y  L
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369

Query: 371 INANCKDQKVEDAVCLYREMLSERIR-----PSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           ++  C   ++ +A  +  EM S         PSV TYN L+ GL + G + DALK   +M
Sbjct: 370 VHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRM 429

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +     PD  +++T ++GL ++G  L+A  +   +R
Sbjct: 430 RSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 178/330 (53%), Gaps = 12/330 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI+    P + +F  L++   + K  +   SL +++ ++G+  D+   N L++ LCK G 
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGR 202

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L R+  S   P+ V ++  + GLC  G++++A ++ +++     DPNVVT+NT
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNT 262

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +++GLC++     AL++ E+M +  G  C  +VV Y++++DGLCK G   +A+ ++  M 
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDG--CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                P+V+TY+SL+ G C     +EA     EM   G +P+ VT+ ++++  C  G++ 
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380

Query: 312 KVNRLLELMIQRGVN-----PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +  R++E M   G       P   TYN+L+ G C  GRI  A + F  M S+GC  D  S
Sbjct: 381 EAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIR 396
           Y+ ++    +  +      L  EM+   +R
Sbjct: 441 YSTIVEGLARSGRA-----LQAEMILSEVR 465



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 154/311 (49%), Gaps = 37/311 (11%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M + G  P++VT+N+L++GF   GR      L  +M ++  + +V SYN L+   CK ++
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 380 VEDAVCLYREMLSE--RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF-- 435
             +A  L R+M+S   R  P ++TY+TLLSG  + G + ++ +L+ ++    + PD+   
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 436 ---------------------------------TFATYIDGLCKNGFVLEAVQVFQAIRN 462
                                            TF T I G C+   +  A  + Q +  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              +  + TYN L++GLCK GRL+ A +L  R++  G  PDVV  S+ ++ LCK G++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A+ +L  M   +  P+ VT+ T+L G  ++ K    + ++ +MA+      ++   S VV
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 583 DLLSKDKKYRE 593
           D L K  + +E
Sbjct: 301 DGLCKLGRTQE 311


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 164/556 (29%), Positives = 277/556 (49%), Gaps = 45/556 (8%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + S+T ++    K        S +  +    + PD+   + +I  LCK      A  
Sbjct: 193 APDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAME 252

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN-----VVTFNTL 192
           VL  ++++   PN  T+  +++G C+ G+  EA    KK+     +P+     + T+ TL
Sbjct: 253 VLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTL 312

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGA----------ICK--------------------- 221
           + G   T+  LV +    +++   G           IC                      
Sbjct: 313 LQGYA-TKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG 371

Query: 222 --PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             PD VTY ++I  LCK G V+ A     QM D  ++P  I YNSLI G C  + W+ A+
Sbjct: 372 LNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 431

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L +EM+D G+  + + FN++I+ +CK+G++ +  +L +LM++ GV PD +TY++L+DG+
Sbjct: 432 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 491

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           CL G++  A +L   MVS G + +  +Y  LIN  CK  ++ DA+ L++EM S  + P +
Sbjct: 492 CLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDI 551

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           ITYN +L GLFQ      A +L  ++  +    +  T+   + GLCKN    +A+++FQ 
Sbjct: 552 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQN 611

Query: 460 IRNCKCELRIE--TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           +  C  +L++E  T+N +I+ L K+GR   A  LF      G +P+  T   M   +  +
Sbjct: 612 L--CLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 669

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G +++ + L L ME   C         ++R  +Q  + ++    L  M  EK    + S 
Sbjct: 670 GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEAST 728

Query: 578 SSKVVDLLSKDKKYRE 593
           +S  +DLLS   KY+E
Sbjct: 729 ASLFIDLLS-GGKYQE 743



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/583 (26%), Positives = 273/583 (46%), Gaps = 46/583 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVL 119
            +A + FD +++      +      L  +A++      VS + R+   G   + P +   
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKVTPTVHTY 90

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLN 178
            +LI C C+       F  LG +++  F    +TF  L+ GLCA+ R  +A  +  +++ 
Sbjct: 91  AILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
             +C P+V +   L+ GLC    +  AL+L   M +  G    PDVV+Y ++I+G  K+G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEG 210

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
              KA     +M DR I+P+V+TY+S+I   C      +A  +   M+ NGV P+  T+ 
Sbjct: 211 DSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYT 270

Query: 299 AMINYNCKDGK-------MDKV---------------------------------NRLLE 318
           ++++  C  G+       + KV                                 + LL+
Sbjct: 271 SIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLD 330

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           LM++ G++PD   YN L+  +   G++  A  +F  M  +G   D  +Y  +I   CK  
Sbjct: 331 LMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSG 390

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +VEDA+  + +M+ E + P  I YN+L+ GL        A +LI +M    +  ++  F 
Sbjct: 391 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 450

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + ID  CK G V+E+ ++F  +     +  I TY+ LI+G C  G++  A KL   +   
Sbjct: 451 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSV 510

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P+ VT  T+I+  CK  +M  A  L  +ME+    P  +T+  +L+G  Q  +++  
Sbjct: 511 GLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQ-TRRTAA 569

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              L+    E     +LS  + ++  L K+K   + L  F++L
Sbjct: 570 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNL 612


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 155/494 (31%), Positives = 256/494 (51%), Gaps = 38/494 (7%)

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
           V      ++  G    L+  N L+  L K  +  GA  +  ++L S   P+ +TFN LIN
Sbjct: 147 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLIN 206

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
            L  +G++ EA  +  ++  +   P+V T+ +LI G CR RN  +A  +F+ MV E    
Sbjct: 207 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG--- 263

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C P+ VTY+++I+GLC +G VD+A ++L +M ++ I P V TY   I   C ++  +EA 
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L   M   G +P+V T+ A+I+   + GK++    L   M++ G+ P+TVTYN+L++  
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C+ GR S A ++F  M   G   +  +YN +I   C    +E A+ L+ +ML     P+V
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT----------------------- 436
           +TYNTL++G    GN+ +A +L+D M+ N   PD +T                       
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 437 ------------FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
                       +   IDG  K+G V  A+ + + +    C   +E+YN +INGL K  R
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
              A K+  ++  +G +P+V+T +T+I  LC+ G+   A  +  DME + C+P+  T+ +
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623

Query: 545 LLRGFVQNNKKSKV 558
           L+ G  Q  K  + 
Sbjct: 624 LIYGLCQEGKADEA 637



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 171/553 (30%), Positives = 271/553 (49%), Gaps = 10/553 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K G +   EA      + +   SP + ++T L+    +N+  D    +F R+  
Sbjct: 204 LINILSKKGKV--REAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 261

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G  P+    + LIN LC  G    A  +L  ++     P   T+   I  LCA     E
Sbjct: 262 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEE 321

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  L  ++    C PNV T+  LI+GL R     VA+ L+ +M+ E G +  P+ VTYN+
Sbjct: 322 AIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE-GLV--PNTVTYNA 378

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+ LC  G    A ++   M+      N  TYN +I G C   D ++A  LF +M+  G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             P VVT+N +IN     G ++   RLL+LM + G  PD  TYN L+ GF   G++  A 
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
             F  MV  G   +  SY  LI+ + KD KV+ A+ L + M      P+V +YN +++GL
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            +     +A K+ DKM    ++P+  T+ T IDGLC+NG    A ++F  +   KC   +
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY+ LI GLC+ G+   A     R+   G  P + T ST++  LC++G+  +A  L+ D
Sbjct: 619 YTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKD 674

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           M+ +   P    + +LL    +N +    + + H + A+   +  LS+   ++  L K  
Sbjct: 675 MKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL-HLSIYRALICALCKAG 733

Query: 590 KYRECLNQFRHLL 602
           +  E    F ++L
Sbjct: 734 QVEEAQALFDNML 746



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 160/521 (30%), Positives = 263/521 (50%), Gaps = 44/521 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+   + MI+    P + ++T+ +T L   +  +  + L  R+   G  P++     L
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L ++G    A  +  ++L+    PNTVT+N LIN LC  GR   A ++F  +     
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N  T+N +I GLC   +   A+ LFE+M+ + G +  P VVTYN++I+G    G V+ 
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKML-KMGPL--PTVVTYNTLINGYLTKGNVNN 461

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL  MK+    P+  TYN L+ GF      + A   F EM++ G+ P+ V++ A+I+
Sbjct: 462 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALID 521

Query: 303 YNCKDGKMD-----------------------------KVNRLLEL------MIQRGVNP 327
            + KDGK+D                             K NR  E       M+++G+ P
Sbjct: 522 GHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLP 581

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + +TY +L+DG C  GR   A ++F  M  + C  ++Y+Y+ LI   C++ K ++A    
Sbjct: 582 NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA---- 637

Query: 388 REMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            E +SE    P++ TY+TL+SGL + G   +A +L+  M+     PD   + + +   CK
Sbjct: 638 -ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCK 696

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           N  V  A+++F +I     +L +  Y  LI  LCK G+++ A  LF  +  K    D + 
Sbjct: 697 NLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIV 756

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
            + ++  L KEG++D    LL  ME+KN  P+  T+  L R
Sbjct: 757 WTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGR 797


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 158/505 (31%), Positives = 262/505 (51%), Gaps = 4/505 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +  A+Y FD M K    P + S   LL  L KN +  T   +++++   G+ PD+F++++
Sbjct: 172 TKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSI 231

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++N  CK G    A   + ++      PN VT++ LING  + G +  A  + K ++   
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              NVVT+  LI G C+      A K+   M  E  A   PD   Y  +IDG C+ G +D
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE--AALVPDERAYGVLIDGYCRTGKID 349

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  LL +M    +  N+   NSLI G+C   +  EA+ +   M+D  ++PD  ++N ++
Sbjct: 350 DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLL 409

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C++G   +   L + M+Q G+ P  +TYN+L+ G C VG    A +++  M+ +G  
Sbjct: 410 DGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVA 469

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D   Y+ L++   K +  E A  L++++L+     S IT+NT++SGL ++G + +A ++
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 529

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            DKM+     PD  T+ T IDG CK   V +A +V  A+        IE YN LI+GL K
Sbjct: 530 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFK 589

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             RL     L   +  +G  P++VT   +I   CKEG +DKA     +M  +N + + + 
Sbjct: 590 SRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM-TENGLSANII 648

Query: 542 FC-TLLRGFVQNNKKSKVVVLLHKM 565
            C T++ G  +  +  +  +L+ KM
Sbjct: 649 ICSTMVSGLYRLGRIDEANLLMQKM 673



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 156/527 (29%), Positives = 269/527 (51%), Gaps = 16/527 (3%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EA    D M++    P + ++  LL  L +   +D  + ++  +   G+ PD    + 
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++ L KM    GA  +   IL   FT + +TFN +I+GLC  G+++EA  +F K+    
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P+ +T+ TLI+G C+  N   A K+   M  E      P +  YNS+I GL K   + 
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMERE---PISPSIEMYNSLISGLFKSRRLV 594

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +  +LL +M  R + PN++TY +LI G+C      +A   + EM +NG+  +++  + M+
Sbjct: 595 EVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMV 654

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   + G++D+ N L++ M+  G  PD   +      +  + +I+ +       + + C+
Sbjct: 655 SGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADS-------LDESCK 707

Query: 362 HDVYS----YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
             +      YNI I   CK  KV+DA   +  +  +   P   TY TL+ G    GN+ +
Sbjct: 708 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 767

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A +L D+M    +VP+  T+   I+GLCK+  V  A ++F  +        + TYN LI+
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G CK+G +  A KL  ++  +G  P VVT S +I+ LCK G ++++  LL  M       
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS 887

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
             + +CTL++G++++ +  K+  L   M    L  S  ++S K VDL
Sbjct: 888 KLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCL--STTAISHKQVDL 932



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 267/590 (45%), Gaps = 73/590 (12%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN+  K+G   ++ A Y +  MI++   P +   +I++    K+ + D      K++ +
Sbjct: 197 LLNNLVKNGE--THTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN 254

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ P++   + LIN    +G    A  VL  +     + N VT+  LI G C + ++ E
Sbjct: 255 LGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDE 314

Query: 170 AARLFKKLNVFAC-DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           A ++ + +   A   P+   +  LI+G CRT     A++L +EM+   G   K ++   N
Sbjct: 315 AEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML-RLG--LKTNLFICN 371

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           S+I+G CK G + +A+ ++ +M D N+ P+  +YN+L+ G+C      EA  L  +M+  
Sbjct: 372 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 431

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD----------- 337
           G++P V+T+N ++   C+ G  D   ++  LM++RGV PD V Y++L+D           
Sbjct: 432 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGA 491

Query: 338 ------------------------GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
                                   G C +G++  A E+F  M   GC  D  +Y  LI+ 
Sbjct: 492 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK   V  A  +   M  E I PS+  YN+L+SGLF+   L +   L+ +M +  + P+
Sbjct: 552 YCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPN 611

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   IDG CK G + +A   +  +        I   + +++GL ++GR+  A  L  
Sbjct: 612 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQ 671

Query: 494 RLQHKGPIPDV---------------------VTCSTM-----------IHWLCKEGQMD 521
           ++   G  PD                       +C T            I  LCK G++D
Sbjct: 672 KMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVD 731

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            A      +  K  VP   T+CTL+ G+       +   L  +M    LV
Sbjct: 732 DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 259/528 (49%), Gaps = 9/528 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN+  +E V  +    +   SP  T F ++L +  +       + +F  +   G  P L 
Sbjct: 138 GNVIWDELVGVYR---EFAFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLR 192

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N L+N L K G T  A  V  +++R    P+    + ++N  C +G++ EAA   KK+
Sbjct: 193 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 252

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                +PN+VT+++LING     +   A  + + M +E G     +VVTY  +I G CK 
Sbjct: 253 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM-SEKGV--SRNVVTYTLLIKGYCKQ 309

Query: 238 GFVDKAKELLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
             +D+A+++L  M++   + P+   Y  LI G+C      +A  L  EM+  G++ ++  
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
            N++IN  CK G++ +   ++  M+   + PD+ +YN+L+DG+C  G  S A  L   M+
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +G    V +YN L+   C+    +DA+ ++  M+   + P  + Y+TLL GLF++ N  
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 489

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A  L   +          TF T I GLCK G ++EA ++F  +++  C     TY  LI
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G CK   +  A K+   ++ +   P +   +++I  L K  ++ +  DLL +M  +   
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 609

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           P+ VT+  L+ G+ +     K      +M    L  + +  S+ V  L
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 195/419 (46%), Gaps = 19/419 (4%)

Query: 184 PNVVTFNTLINGLCRTR---------NTLVAL--------KLFEEMVNEFGAICKPDVVT 226
           PNV ++  L++ L R R         N LV L         +++E+V  +        V 
Sbjct: 100 PNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTV- 158

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           ++ I+    + G    A  +   M      P++ + NSL+       +   A  ++ +M+
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G+ PDV   + M+N  CKDGK+D+    ++ M   GV P+ VTY+SL++G+  +G + 
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVITYNTL 405
            A+ +   M  KG   +V +Y +LI   CK  K+++A  + R M  E  + P    Y  L
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + G  + G + DA++L+D+M    +  + F   + I+G CK G + EA  V   + +   
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +    +YN L++G C+ G    A  L  ++  +G  P V+T +T++  LC+ G  D A  
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           +   M  +   P EV + TLL G  +         L   + A     S ++ ++ +  L
Sbjct: 459 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 152/473 (32%), Positives = 247/473 (52%), Gaps = 5/473 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +++F +L+  L +  Q    + + + + S GL PD      ++    + G   GA  +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLC 197
             +++    + + V+ N +++G C EGR+ +A    +++ N     P+  TFNTL+NGLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  +   A+++ + M+ E      PDV TYNS+I GLCK G V +A E+L QM  R+ +P
Sbjct: 307 KAGHVKHAIEIMDVMLQEG---YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N +TYN+LI   C  +  +EA  L   +   G+ PDV TFN++I   C          L 
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M  +G  PD  TYN L+D  C  G++  A  +   M   GC   V +YN LI+  CK 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            K  +A  ++ EM    +  + +TYNTL+ GL +   + DA +L+D+M +    PD +T+
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            + +   C+ G + +A  + QA+ +  CE  I TY  LI+GLCK GR++ A KL   +Q 
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM-EAKNCVPSEVTFCTLLRGF 549
           KG        + +I  L ++ +  +A +L  +M E     P  V++  + RG 
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 148/423 (34%), Positives = 226/423 (53%), Gaps = 5/423 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +F  L+  L K       + +   +   G  PD++  N +I+ LCK+G    A  V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L +++    +PNTVT+N LI+ LC E ++ EA  L + L      P+V TFN+LI GLC 
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           TRN  VA++LFEEM ++    C+PD  TYN +ID LC  G +D+A  +L QM+      +
Sbjct: 413 TRNHRVAMELFEEMRSKG---CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           VITYN+LI GFC  +  +EA+ +F EM  +GV  + VT+N +I+  CK  +++   +L++
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MI  G  PD  TYNSL+  FC  G I +A ++  +M S GC  D+ +Y  LI+  CK  
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTF 437
           +VE A  L R +  + I  +   YN ++ GLF+     +A+ L  +M + N+  PD+ ++
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649

Query: 438 ATYIDGLCKNGF-VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
                GLC  G  + EAV     +          +   L  GL  +   +T  KL + + 
Sbjct: 650 RIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVM 709

Query: 497 HKG 499
            K 
Sbjct: 710 QKA 712



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 175/586 (29%), Positives = 288/586 (49%), Gaps = 36/586 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVY-----------FFDCMIK----MKPSP---GMTSF 84
           D ++  +  N   K  N +   A+Y            FD M K    MK S    G ++F
Sbjct: 62  DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTF 121

Query: 85  TILLTMLAKNKQYDTVVSLFK-RLNSNGLFPDLF----VLNLLI--NCLCKMGITSGAFV 137
            IL+   A+ +  D ++S+    ++  GL PD      +LNLL+  N L  + I+     
Sbjct: 122 LILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMS 181

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V G        P+  TFN LI  LC   ++  A  + + +  +   P+  TF T++ G  
Sbjct: 182 VWG------IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI 235

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-IN 256
              +   AL++ E+MV EFG  C    V+ N I+ G CK+G V+ A   + +M +++   
Sbjct: 236 EEGDLDGALRIREQMV-EFG--CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+  T+N+L+ G C     K A  +   M+  G  PDV T+N++I+  CK G++ +   +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L+ MI R  +P+TVTYN+L+   C   ++  A EL   + SKG   DV ++N LI   C 
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
            +    A+ L+ EM S+   P   TYN L+  L   G L +AL ++ +M+L+       T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + T IDG CK     EA ++F  +          TYN LI+GLCK  R++ A +L  ++ 
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +G  PD  T ++++   C+ G + KA D++  M +  C P  VT+ TL+ G  +  +  
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
               LL  +  + + ++  + +  V+  L + +K  E +N FR +L
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNP-VIQGLFRKRKTTEAINLFREML 637



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 186/393 (47%), Gaps = 42/393 (10%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV   D MI    SP   ++  L++ L K  Q +    L + L S G+ PD+   N LI
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC       A  +   +      P+  T+N LI+ LC++G++ EA  + K++ +  C 
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            +V+T+NTLI+G C+   T  A ++F+EM  E   + + + VTYN++IDGLCK   V+ A
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEM--EVHGVSR-NSVTYNTLIDGLCKSRRVEDA 524

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L+ QM      P+  TYNSL+  FC   D K+A  +   M  NG +PD+VT+  +I+ 
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584

Query: 304 NCKDGKMDKVNRLLELMIQRGVN------------------------------------P 327
            CK G+++  ++LL  +  +G+N                                    P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644

Query: 328 DTVTYNSLMDGFC-LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           D V+Y  +  G C   G I  A +  V ++ KG   +  S  +L         +E+ +  
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG-LLTLSMEETLVK 703

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              M+ ++ R S     +++ GL ++    DAL
Sbjct: 704 LVNMVMQKARFSEEEV-SMVKGLLKIRKFQDAL 735



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 5/199 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + EA   FD M     S    ++  L+  L K+++ +    L  ++   G  PD +  N 
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545

Query: 122 LINCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           L+   C+ G I   A +V       C  P+ VT+  LI+GLC  GR+  A++L + + + 
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGC-EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF- 239
             +     +N +I GL R R T  A+ LF EM+ +  A   PD V+Y  +  GLC  G  
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA--PPDAVSYRIVFRGLCNGGGP 662

Query: 240 VDKAKELLLQMKDRNINPN 258
           + +A + L+++ ++   P 
Sbjct: 663 IREAVDFLVELLEKGFVPE 681


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 144/453 (31%), Positives = 249/453 (54%), Gaps = 8/453 (1%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R+   PN+VTFN L+NG   +GR  +  RL + +      PNVV++N L+ GLC+     
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWH 62

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A +L  +M++  G    PD+VTY++++ G CK G V++++ELL ++  R + P+ + Y 
Sbjct: 63  EAEELVRDMISR-GGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYT 121

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            ++   C      EA  L  EM+  G  P ++TFN +I+  C++  ++  + LL+ M   
Sbjct: 122 KVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAAS 181

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           GV  D VTYN+LMDG C  GR+  A +L   M + GC  DV +Y+  +   CK  KV +A
Sbjct: 182 GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNA 241

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP-DSFTFATYID 442
             +  +M      P+V+TYNT+L GL + G +  AL+++++M  +D    +   ++T +D
Sbjct: 242 HQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVD 301

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK G   EA  V +A+    C   + TY+ L+NGLCK G+++ A +    +  +G  P
Sbjct: 302 GLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP 361

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAK-----NCVPSEVTFCTLLRGFVQNNKKSK 557
           + VT  +++H LC  G++ +A  ++ +M +      +C PS  T+  L+ G  +  +   
Sbjct: 362 NAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDD 421

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            +    +M ++      +S S+ +V+ L++  +
Sbjct: 422 ALKFFQRMRSQGCDPDGVSYST-IVEGLARSGR 453



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 246/455 (54%), Gaps = 15/455 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +F  L+   +K  +      L + + + G+ P++   N L+  LCK+     A  +
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 139 ----LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
               + R  RS  TP+ VT++ L++G C  G++ E+  L K++      P+ + +  ++ 
Sbjct: 68  VRDMISRGGRS--TPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
            LC++     AL+L EEM+    A C P ++T+N++I G C++  ++ A  LL  M    
Sbjct: 126 SLCKSARLGEALELLEEMIR---AGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASG 182

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           +  +V+TYN+L+ G C     +EA+ L   M  +G  PDVV +++ +   CK GK+   +
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAH 242

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-GCRHDVYSYNILINA 373
           ++LE M     +P+ VTYN+++DG C  G+I  A E+   M S  GC  +V  Y+ +++ 
Sbjct: 243 QVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG 302

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK  + ++A  +   M     RP V+TY++L++GL + G + +A++ + +M +    P+
Sbjct: 303 LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNC-----KCELRIETYNCLINGLCKMGRLKTA 488
           + T+ + + GLC  G + EA ++ + + +       C   + TYN LI GLCK GR+  A
Sbjct: 363 AVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDA 422

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
            K F R++ +G  PD V+ ST++  L + G+  +A
Sbjct: 423 LKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 207/388 (53%), Gaps = 17/388 (4%)

Query: 76  KPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
           + +P + +++ LL+   K  + +    L K + S GL PD  +   ++  LCK      A
Sbjct: 77  RSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEA 136

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             +L  ++R+   P  +TFN LI+G C E  +  A  L + +       +VVT+NTL++G
Sbjct: 137 LELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDG 196

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           LC+      A +L E M     + C PDVV Y+S + GLCK G V  A ++L QM+D + 
Sbjct: 197 LCKAGRLQEAEQLLERM---KASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDH 253

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-----NGVQPDVVTFNAMINYNCKDGKM 310
           +PNV+TYN+++ G C       A    +EMM+     +G   +VV ++ +++  CK G+ 
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTA----LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
            +   ++E M + G  PD VTY+SL++G C  G+I  A E    M  +GC+ +  +Y  L
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369

Query: 371 INANCKDQKVEDAVCLYREM-----LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           ++  C   ++ +A  +  EM       +   PSV TYN L+ GL + G + DALK   +M
Sbjct: 370 VHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRM 429

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEA 453
           +     PD  +++T ++GL ++G  L+A
Sbjct: 430 RSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 168/307 (54%), Gaps = 7/307 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI+    P + +F  L++   + K  +   SL + + ++G+  D+   N L++ LCK G 
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGR 202

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L R+  S   P+ V ++  + GLC  G+++ A ++ +++     DPNVVT+NT
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNT 262

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +++GLC++     AL++ E+M +  G  C  +VV Y++++DGLCK G   +A+ ++  M 
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDG--CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                P+V+TY+SL+ G C     +EA     EM   G +P+ VT+ ++++  C  G++ 
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380

Query: 312 KVNRLLELMIQRGVN-----PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +  R++E M   G       P   TYN+L+ G C  GRI  A + F  M S+GC  D  S
Sbjct: 381 EAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440

Query: 367 YNILINA 373
           Y+ ++  
Sbjct: 441 YSTIVEG 447



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 155/311 (49%), Gaps = 37/311 (11%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M + G  P++VT+N+L++GF   GR      L  +M ++G + +V SYN L+   CK ++
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 380 VEDAVCLYREMLSE--RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF-- 435
             +A  L R+M+S   R  P ++TY+TLLSG  + G + ++ +L+ ++    + PD+   
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 436 ---------------------------------TFATYIDGLCKNGFVLEAVQVFQAIRN 462
                                            TF T I G C+   +  A  + Q +  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              +  + TYN L++GLCK GRL+ A +L  R++  G  PDVV  S+ ++ LCK G++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A+ +L  M   +  P+ VT+ T+L G  ++ K    + ++ +MA+      ++   S VV
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 583 DLLSKDKKYRE 593
           D L K  + +E
Sbjct: 301 DGLCKLGRTQE 311


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 158/505 (31%), Positives = 262/505 (51%), Gaps = 4/505 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +  A+Y FD M K    P + S   LL  L KN +  T   +++++   G+ PD+F++++
Sbjct: 138 TKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSI 197

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++N  CK G    A   + ++      PN VT++ LING  + G +  A  + K ++   
Sbjct: 198 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              NVVT+  LI G C+      A K+   M  E  A   PD   Y  +IDG C+ G +D
Sbjct: 258 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE--AALVPDERAYGVLIDGYCRTGKID 315

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  LL +M    +  N+   NSLI G+C   +  EA+ +   M+D  ++PD  ++N ++
Sbjct: 316 DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLL 375

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C++G   +   L + M+Q G+ P  +TYN+L+ G C VG    A +++  M+ +G  
Sbjct: 376 DGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVA 435

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D   Y+ L++   K +  E A  L++++L+     S IT+NT++SGL ++G + +A ++
Sbjct: 436 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 495

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            DKM+     PD  T+ T IDG CK   V +A +V  A+        IE YN LI+GL K
Sbjct: 496 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFK 555

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             RL     L   +  +G  P++VT   +I   CKEG +DKA     +M  +N + + + 
Sbjct: 556 SRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM-TENGLSANII 614

Query: 542 FC-TLLRGFVQNNKKSKVVVLLHKM 565
            C T++ G  +  +  +  +L+ KM
Sbjct: 615 ICSTMVSGLYRLGRIDEANLLMQKM 639



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 267/590 (45%), Gaps = 73/590 (12%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN+  K+G   ++ A Y +  MI++   P +   +I++    K+ + D      K++ +
Sbjct: 163 LLNNLVKNGE--THTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN 220

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ P++   + LIN    +G    A  VL  +     + N VT+  LI G C + ++ E
Sbjct: 221 LGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDE 280

Query: 170 AARLFKKLNVFAC-DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           A ++ + +   A   P+   +  LI+G CRT     A++L +EM+   G   K ++   N
Sbjct: 281 AEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML-RLG--LKTNLFICN 337

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           S+I+G CK G + +A+ ++ +M D N+ P+  +YN+L+ G+C      EA  L  +M+  
Sbjct: 338 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 397

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD----------- 337
           G++P V+T+N ++   C+ G  D   ++  LM++RGV PD V Y++L+D           
Sbjct: 398 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGA 457

Query: 338 ------------------------GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
                                   G C +G++  A E+F  M   GC  D  +Y  LI+ 
Sbjct: 458 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 517

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK   V  A  +   M  E I PS+  YN+L+SGLF+   L +   L+ +M +  + P+
Sbjct: 518 YCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPN 577

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   IDG CK G + +A   +  +        I   + +++GL ++GR+  A  L  
Sbjct: 578 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQ 637

Query: 494 RLQHKGPIPDV---------------------VTCSTM-----------IHWLCKEGQMD 521
           ++   G  PD                       +C T            I  LCK G++D
Sbjct: 638 KMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVD 697

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            A      +  K  VP   T+CTL+ G+       +   L  +M    LV
Sbjct: 698 DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 747



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 259/528 (49%), Gaps = 9/528 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN+  +E V  +    +   SP  T F ++L +  +       + +F  +   G  P L 
Sbjct: 104 GNVIWDELVGVYR---EFAFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLR 158

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N L+N L K G T  A  V  +++R    P+    + ++N  C +G++ EAA   KK+
Sbjct: 159 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 218

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                +PN+VT+++LING     +   A  + + M +E G     +VVTY  +I G CK 
Sbjct: 219 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM-SEKGV--SRNVVTYTLLIKGYCKQ 275

Query: 238 GFVDKAKELLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
             +D+A+++L  M++   + P+   Y  LI G+C      +A  L  EM+  G++ ++  
Sbjct: 276 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 335

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
            N++IN  CK G++ +   ++  M+   + PD+ +YN+L+DG+C  G  S A  L   M+
Sbjct: 336 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 395

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +G    V +YN L+   C+    +DA+ ++  M+   + P  + Y+TLL GLF++ N  
Sbjct: 396 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 455

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A  L   +          TF T I GLCK G ++EA ++F  +++  C     TY  LI
Sbjct: 456 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 515

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G CK   +  A K+   ++ +   P +   +++I  L K  ++ +  DLL +M  +   
Sbjct: 516 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 575

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           P+ VT+  L+ G+ +     K      +M    L  + +  S+ V  L
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 623



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 235/489 (48%), Gaps = 8/489 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K G I   E V     M+     P   S+  LL    +        +L  ++  
Sbjct: 339 LINGYCKRGEIHEAEGV--ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 396

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ P +   N L+  LC++G    A  +   +++    P+ V ++ L++GL        
Sbjct: 397 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 456

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A+ L+K +       + +TFNT+I+GLC+    + A ++F++M  + G  C PD +TY +
Sbjct: 457 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM-KDLG--CSPDGITYRT 513

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +IDG CK   V +A ++   M+   I+P++  YNSLI G        E   L  EM   G
Sbjct: 514 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 573

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           + P++VT+ A+I+  CK+G +DK       M + G++ + +  ++++ G   +GRI  A 
Sbjct: 574 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 633

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            L   MV  G   D   +   + ++ +   ++       E     + P+ I YN  ++GL
Sbjct: 634 LLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 690

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            + G + DA +    + L   VPD+FT+ T I G    G V EA ++   +        I
Sbjct: 691 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 750

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TYN LINGLCK   +  A +LFH+L  KG  P+VVT +T+I   CK G MD A  L   
Sbjct: 751 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 810

Query: 530 MEAKNCVPS 538
           M  +   PS
Sbjct: 811 MIEEGISPS 819



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 242/496 (48%), Gaps = 14/496 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++ +L+    +  + D  V L   +   GL  +LF+ N LIN  CK G    A  V
Sbjct: 296 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 355

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           + R++     P++ ++N L++G C EG   EA  L  K+     +P V+T+NTL+ GLCR
Sbjct: 356 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 415

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 AL+++  M+    A   PD V Y++++DGL K    + A  L   +  R    +
Sbjct: 416 VGAFDDALQIWHLMMKRGVA---PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKS 472

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            IT+N++I G C +    EA+ +F +M D G  PD +T+  +I+  CK   + +  ++  
Sbjct: 473 RITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKG 532

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M +  ++P    YNSL+ G     R+    +L   M  +G   ++ +Y  LI+  CK+ 
Sbjct: 533 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 592

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++ A   Y EM    +  ++I  +T++SGL+++G + +A  L+ KM  +   PD   F 
Sbjct: 593 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF- 651

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE----TYNCLINGLCKMGRLKTACKLFHR 494
                  K+     A+Q      +  C+  +      YN  I GLCK G++  A + F  
Sbjct: 652 ------LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 705

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           L  KG +PD  T  T+IH     G +D+A  L  +M  +  VP+ VT+  L+ G  ++  
Sbjct: 706 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 765

Query: 555 KSKVVVLLHKMAAEKL 570
             +   L HK+  + L
Sbjct: 766 VDRAQRLFHKLHQKGL 781



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 233/466 (50%), Gaps = 16/466 (3%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    L+   + G+  ++EA    D M++    P + ++  LL  L +   +D  + 
Sbjct: 367 DSYSYNTLLDGYCREGH--TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 424

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           ++  +   G+ PD    + L++ L KM    GA  +   IL   FT + +TFN +I+GLC
Sbjct: 425 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 484

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G+++EA  +F K+    C P+ +T+ TLI+G C+  N   A K+   M  E      P
Sbjct: 485 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMERE---PISP 541

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            +  YNS+I GL K   + +  +LL +M  R + PN++TY +LI G+C      +A   +
Sbjct: 542 SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 601

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM +NG+  +++  + M++   + G++D+ N L++ M+  G  PD   +      +  +
Sbjct: 602 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI 661

Query: 343 GRISRARELFVSMVSKGCRHDVYS----YNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            +I+ +       + + C+  +      YNI I   CK  KV+DA   +  +  +   P 
Sbjct: 662 QKIADS-------LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 714

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
             TY TL+ G    GN+ +A +L D+M    +VP+  T+   I+GLCK+  V  A ++F 
Sbjct: 715 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 774

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            +        + TYN LI+G CK+G +  A KL  ++  +G  P +
Sbjct: 775 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 195/419 (46%), Gaps = 19/419 (4%)

Query: 184 PNVVTFNTLINGLCRTR---------NTLVAL--------KLFEEMVNEFGAICKPDVVT 226
           PNV ++  L++ L R R         N LV L         +++E+V  +        V 
Sbjct: 66  PNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTV- 124

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           ++ I+    + G    A  +   M      P++ + NSL+       +   A  ++ +M+
Sbjct: 125 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 184

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G+ PDV   + M+N  CKDGK+D+    ++ M   GV P+ VTY+SL++G+  +G + 
Sbjct: 185 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 244

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVITYNTL 405
            A+ +   M  KG   +V +Y +LI   CK  K+++A  + R M  E  + P    Y  L
Sbjct: 245 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 304

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + G  + G + DA++L+D+M    +  + F   + I+G CK G + EA  V   + +   
Sbjct: 305 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 364

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +    +YN L++G C+ G    A  L  ++  +G  P V+T +T++  LC+ G  D A  
Sbjct: 365 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 424

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           +   M  +   P EV + TLL G  +         L   + A     S ++ ++ +  L
Sbjct: 425 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 483


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 159/511 (31%), Positives = 265/511 (51%), Gaps = 4/511 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+    + ++       F+ L S GL   +   N L+  L K+G    A+ +   ++
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 246

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           RS    N  T N +IN LC   +I         +      P+VVT+NTLIN  CR     
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 306

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A +L + M    G   KP V TYN+II+GLCK G   +AK +L +M    ++P+  TYN
Sbjct: 307 EAFELMDSMS---GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 363

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            L+   C  D+  +A+ +F EM   GV PD+V+F+A+I    K+G +D+  +    M   
Sbjct: 364 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 423

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD V Y  L+ GFC  G +S A ++   M+ +GC  DV +YN ++N  CK++ + +A
Sbjct: 424 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 483

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+ EM    + P   T+ TL++G  + GN+  A+ L + M   ++ PD  T+ T IDG
Sbjct: 484 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 543

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK   + +  +++  + + +      +Y  LING C MG +  A +L+  +  KG    
Sbjct: 544 FCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 603

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           ++TC+T++   C+ G   KA++ L +M  K  VP  +T+ TL+ GF++     +   L++
Sbjct: 604 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 663

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           KM    L + D+   + +++  S+  + +E 
Sbjct: 664 KMENSGL-LPDVITYNVILNGFSRQGRMQEA 693



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 258/492 (52%), Gaps = 3/492 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++  L KN++ +   S    +   G+FPD+   N LIN  C+ G+   AF ++  +
Sbjct: 256 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 315

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P   T+N +INGLC  G+ + A  +  ++      P+  T+N L+   CR  N 
Sbjct: 316 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 375

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           + A ++F+EM ++ G +  PD+V+++++I  L K+G +D+A +    MK+  + P+ + Y
Sbjct: 376 MDAERIFDEMPSQ-GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 432

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             LI GFC      EA  +  EM++ G   DVVT+N ++N  CK+  + + + L   M +
Sbjct: 433 TILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTE 492

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RGV PD  T+ +L++G+   G +++A  LF  M+ +  + DV +YN LI+  CK  ++E 
Sbjct: 493 RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 552

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
              L+ +M+S RI P+ I+Y  L++G   +G + +A +L D+M          T  T + 
Sbjct: 553 VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVK 612

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G C+ G  ++A +    +          TYN LING  K   +  A  L +++++ G +P
Sbjct: 613 GYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP 672

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           DV+T + +++   ++G+M +A  ++L M  +   P   T+ +L+ G V  N   +   + 
Sbjct: 673 DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 732

Query: 563 HKMAAEKLVVSD 574
            +M     V  D
Sbjct: 733 DEMLQRGFVPDD 744



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 197/370 (53%), Gaps = 3/370 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   FD M      P + SF+ L+ +L+KN   D  +  F+ + + GL PD  +  +LI
Sbjct: 377 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 436

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+ G+ S A  V   +L      + VT+N ++NGLC E  + EA  LF ++      
Sbjct: 437 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 496

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+  TF TLING  +  N   A+ LFE M+       KPDVVTYN++IDG CK   ++K 
Sbjct: 497 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN---LKPDVVTYNTLIDGFCKGSEMEKV 553

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            EL   M  R I PN I+Y  LI G+C +    EA  L+ EM++ G +  ++T N ++  
Sbjct: 554 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 613

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G   K +  L  M+ +G+ PD +TYN+L++GF     + RA  L   M + G   D
Sbjct: 614 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 673

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN+++N   +  ++++A  +  +M+   + P   TY +L++G     NL +A ++ D
Sbjct: 674 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 733

Query: 424 KMQLNDVVPD 433
           +M     VPD
Sbjct: 734 EMLQRGFVPD 743



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 235/487 (48%), Gaps = 9/487 (1%)

Query: 21  NFWCSFGRPPNPKTDLSSHH----FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           N  C   +  N K+ LS       F D  +    +N   + G +   EA    D M    
Sbjct: 262 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL--EEAFELMDSMSGKG 319

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
             P + ++  ++  L K  +Y     +   +   G+ PD    N+L+   C+      A 
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 379

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +   +      P+ V+F+ LI  L   G + +A + F+ +      P+ V +  LI G 
Sbjct: 380 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR      ALK+ +EM+ +    C  DVVTYN+I++GLCK+  + +A EL  +M +R + 
Sbjct: 440 CRNGVMSEALKVRDEMLEQG---CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 496

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+  T+ +LI G+    +  +A  LF  M+   ++PDVVT+N +I+  CK  +M+KVN L
Sbjct: 497 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 556

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              MI R + P+ ++Y  L++G+C +G +S A  L+  MV KG    + + N ++   C+
Sbjct: 557 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 616

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
                 A      ML + I P  ITYNTL++G  +  N+  A  L++KM+ + ++PD  T
Sbjct: 617 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 676

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   ++G  + G + EA  +   +          TY  LING      LK A ++   + 
Sbjct: 677 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 736

Query: 497 HKGPIPD 503
            +G +PD
Sbjct: 737 QRGFVPD 743



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 159/352 (45%), Gaps = 35/352 (9%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
           N   N + ++ L+  +      +E    F  +   G+   +   N+++    K G +D  
Sbjct: 179 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 238

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             + + +++ GV  +  T N +++  C   +I   +     M  KG   DV +YN LINA
Sbjct: 239 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG-------------------- 413
            C+   +E+A  L   M  + ++P V TYN +++GL + G                    
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358

Query: 414 ---------------NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
                          N+ DA ++ D+M    VVPD  +F+  I  L KNG + +A++ F+
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            ++N         Y  LI G C+ G +  A K+   +  +G + DVVT +T+++ LCKE 
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            + +A++L  +M  +   P   TF TL+ G+ ++   +K V L   M    L
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 530


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 144/384 (37%), Positives = 218/384 (56%), Gaps = 3/384 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F+ M+ M  +P +  F  +L  LAK K Y T +SL K++   G+ P+L  LN+L
Sbjct: 34  DDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNIL 93

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C +G  S +F VLG+IL+  + PNT+T   L+ GLC +G + ++     K+     
Sbjct: 94  INCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGF 153

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V++ TL+NGLC+   T  A+K    + +    +   +VV YN+IIDGLCKD  V++
Sbjct: 154 QMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGL---NVVMYNTIIDGLCKDKLVNE 210

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +   +M  R I PNVITY +LI GFC       A  L  EM+   + P+V T+  +I+
Sbjct: 211 AYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILID 270

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+ +   LL  M  RG   D VTY SL+DGFC    + +A  LF+ M   G + 
Sbjct: 271 ALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQP 330

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           + Y+Y  LI+  CK  +++DA  L++++L +     V TYN ++ GL + G L +AL + 
Sbjct: 331 NKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIK 390

Query: 423 DKMQLNDVVPDSFTFATYIDGLCK 446
            KM+ N  +P+  TF   I  L K
Sbjct: 391 SKMEDNGCIPNVVTFEIIIRSLFK 414



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 203/387 (52%), Gaps = 3/387 (0%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           TP  V F  ++  L        A  L K++ V   +PN+VT N LIN  C       +  
Sbjct: 49  TPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFS 108

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +  +++ + G   +P+ +T  +++ GLC  G V K+     ++  +    N ++Y +L+ 
Sbjct: 109 VLGKIL-KLGY--QPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLN 165

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C + + + A      + D+    +VV +N +I+  CKD  +++       M  RG+ P
Sbjct: 166 GLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFP 225

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + +TY +L+ GFCL G+++ A  L   M+ K    +VY+Y ILI+A CK+ KV++A  L 
Sbjct: 226 NVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLL 285

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            EM        V+TY +LL G  +  NL  A  L  KM+   + P+ +T+   IDGLCK 
Sbjct: 286 AEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKG 345

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + +A ++FQ +    C + + TYN +I GLCK G L  A  +  +++  G IP+VVT 
Sbjct: 346 GRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTF 405

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKN 534
             +I  L K+ + DKA  LL +M AK 
Sbjct: 406 EIIIRSLFKKDENDKAEKLLHEMIAKG 432



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 205/403 (50%), Gaps = 3/403 (0%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A   F  + +    P +V F  ++  L + ++   A+ L ++M  E   I +P++VT N
Sbjct: 35  DAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQM--EVKGI-EPNLVTLN 91

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +I+  C  G +  +  +L ++      PN IT  +L+ G C   + +++     +++  
Sbjct: 92  ILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQ 151

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G Q + V++  ++N  CK G+     + L ++       + V YN+++DG C    ++ A
Sbjct: 152 GFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEA 211

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            + +  M ++G   +V +Y  LI   C   ++  A  L  EM+ + I P+V TY  L+  
Sbjct: 212 YDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDA 271

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G + +A  L+ +M       D  T+ + +DG CKN  + +A  +F  ++    +  
Sbjct: 272 LCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPN 331

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
             TY  LI+GLCK GRLK A KLF  L  KG   DV T + MI  LCKEG +D+A  +  
Sbjct: 332 KYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKS 391

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            ME   C+P+ VTF  ++R   + ++  K   LLH+M A+ L+
Sbjct: 392 KMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 6/158 (3%)

Query: 24  CSFGRPPNPKTDLSSHHFK----DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           C  G+    K  L+  H++    D  +    L+   K+ N+  ++A   F  M +    P
Sbjct: 273 CKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNL--DKATALFMKMKEWGIQP 330

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
              ++T L+  L K  +      LF+ L   G   D+   N++I  LCK G+   A  + 
Sbjct: 331 NKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIK 390

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
            ++  +   PN VTF  +I  L  +    +A +L  ++
Sbjct: 391 SKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM 428


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 159/486 (32%), Positives = 257/486 (52%), Gaps = 8/486 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K    P    +  L+  L+K  + +  + L + +   G  PD+   N +I  LC++  
Sbjct: 234 MTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNR 293

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
                 ++ R+L   FTPN +T+  L+NGLC  G++ EA  L  K+      PN V F  
Sbjct: 294 IHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTI 349

Query: 192 LINGLCRT-RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           LING  ++ R       L+++M+      C+PDV T+N++I GLCK G +  A +++  M
Sbjct: 350 LINGYVKSGRLDEANAFLYDKMIKNG---CRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
                 PN+ITY +L+ GFC  +  +EA  +  EM   G + +++ +N ++   CK+GK+
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
            K   +L  M  +G  PD  T+N+L+ G C V R   A  L+  M+  G   +  +YN L
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+A  +   +++A+ L  +ML        ITYN L+    ++G    AL L D+M   D+
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           VP + +    I+GLC+ G V  A+++ + + +      + TYN LINGLCKMG ++ A  
Sbjct: 587 VPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFN 646

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           LF++LQ +G  PD +T +T+I W C+ G  D A  LLL       +P++VT+  L+  F+
Sbjct: 647 LFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFI 706

Query: 551 QNNKKS 556
           +   K 
Sbjct: 707 KEIGKE 712



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 154/457 (33%), Positives = 236/457 (51%), Gaps = 10/457 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+   + M  M   P + +F  ++  L +  +      L  R+   G  P+     +L
Sbjct: 260 NEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVL 319

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA-ARLFKKLNVFA 181
           +N LC++G    A V+L ++     TPN V F  LING    GR+ EA A L+ K+    
Sbjct: 320 MNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNG 375

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA-ICKPDVVTYNSIIDGLCKDGFV 240
           C P+V TFNTLI+GLC+      A+    +MVN+  A  C P+++TY +++DG CK   +
Sbjct: 376 CRPDVFTFNTLIHGLCKKGLMGSAV----DMVNDMSANGCTPNLITYTTLLDGFCKKNQL 431

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           ++A  +L +M  +    N++ YN L+   C      +A  +  EM D G +PD+ TFN +
Sbjct: 432 EEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTL 491

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I   CK  + +    L   M+  GV  +TVTYN+L+  F   G I  A +L   M+ +GC
Sbjct: 492 IFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGC 551

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D  +YN LI A CK    E A+ L+ EM+ + + PS I+ N L++GL +VG + +AL+
Sbjct: 552 PLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALE 611

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L+  M    + PD  T+ + I+GLCK G + EA  +F  ++    +    TYN LI   C
Sbjct: 612 LLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHC 671

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + G    A  L  R      IP+ VT   ++    KE
Sbjct: 672 RAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 148/489 (30%), Positives = 235/489 (48%), Gaps = 9/489 (1%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P     N++++ L      S A  V   +L     P   TF  ++  LC    +  A  L
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            + +    C PN V + TLI+ L +      ALKL EEM   F   C PDV T+N +I G
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEM---FLMGCLPDVDTFNDVIYG 287

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LC+   + +  +L+ +M  R   PN ITY  L+ G C V    EA+ L    ++    P+
Sbjct: 288 LCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL----LNKVPTPN 343

Query: 294 VVTFNAMINYNCKDGKMDKVNRLL-ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
            V F  +IN   K G++D+ N  L + MI+ G  PD  T+N+L+ G C  G +  A ++ 
Sbjct: 344 DVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMV 403

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M + GC  ++ +Y  L++  CK  ++E+A  +  EM ++    +++ YN LL  L + 
Sbjct: 404 NDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKN 463

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G +  AL ++ +M      PD FTF T I GLCK     +A+ +++ +          TY
Sbjct: 464 GKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTY 523

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI+   + G ++ A KL + +  +G   D +T + +I   CK G  +KA  L  +M  
Sbjct: 524 NTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVR 583

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           K+ VPS ++   L+ G  +  K    + LL  M    L   D+   + +++ L K    R
Sbjct: 584 KDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGL-APDVVTYNSLINGLCKMGNIR 642

Query: 593 ECLNQFRHL 601
           E  N F  L
Sbjct: 643 EAFNLFNKL 651



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 202/399 (50%), Gaps = 9/399 (2%)

Query: 169 EAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
           +A R+   +  V+ C+P   ++N +++ L       VA  +F EM+++ G I  P V T+
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSK-GVI--PTVYTF 211

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
             ++  LC    VD A  LL  M      PN + Y +LI      D   EA  L  EM  
Sbjct: 212 GVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFL 271

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G  PDV TFN +I   C+  ++ +  +L++ M+ RG  P+ +TY  LM+G C VG++  
Sbjct: 272 MGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDE 331

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA-VCLYREMLSERIRPSVITYNTLL 406
           A+ L   + +    H    + ILIN   K  ++++A   LY +M+    RP V T+NTL+
Sbjct: 332 AQVLLNKVPTPNDVH----FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLI 387

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL + G +G A+ +++ M  N   P+  T+ T +DG CK   + EA  V   +     E
Sbjct: 388 HGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFE 447

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           L I  YN L+  LCK G++  A  +   +  KG  PD+ T +T+I  LCK  + + A  L
Sbjct: 448 LNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALAL 507

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             DM     + + VT+ TL+  F++     + + L++ M
Sbjct: 508 YRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 193/385 (50%), Gaps = 6/385 (1%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C+P   +YN ++D L        A  +  +M  + + P V T+  ++   C V++   A 
Sbjct: 169 CEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNAC 228

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L  +M  +G  P+ V +  +I+   K  ++++  +LLE M   G  PD  T+N ++ G 
Sbjct: 229 SLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGL 288

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C + RI    +L   M+ +G   +  +Y +L+N  C+  KV++A    + +L++   P+ 
Sbjct: 289 CRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA----QVLLNKVPTPND 344

Query: 400 ITYNTLLSGLFQVGNLGDALK-LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           + +  L++G  + G L +A   L DKM  N   PD FTF T I GLCK G +  AV +  
Sbjct: 345 VHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVN 404

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +    C   + TY  L++G CK  +L+ A  + + +  KG   +++  + ++  LCK G
Sbjct: 405 DMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNG 464

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
           ++ KA D+L +M  K C P   TF TL+ G  + ++K   + L   M  + ++ + ++ +
Sbjct: 465 KVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYN 524

Query: 579 SKVVDLLSKDKKYRECLNQFRHLLF 603
           + +   L +    +E L     +LF
Sbjct: 525 TLIHAFL-RGGAIQEALKLVNDMLF 548



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 184/415 (44%), Gaps = 37/415 (8%)

Query: 17  GYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           G   N  C  G+    +  L+     +       +N   KSG +    A + +D MIK  
Sbjct: 317 GVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANA-FLYDKMIKNG 375

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
             P + +F  L+  L K     + V +   +++NG  P+L     L++  CK      A 
Sbjct: 376 CRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAG 435

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            VL  +    F  N + +N L+  LC  G++ +A  +  +++   C P++ TFNTLI GL
Sbjct: 436 YVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGL 495

Query: 197 CRTRNTLVALKLFEEM---------------VNEF---GAI--------------CKPDV 224
           C+      AL L+ +M               ++ F   GAI              C  D 
Sbjct: 496 CKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDE 555

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           +TYN +I   CK G  +KA  L  +M  +++ P+ I+ N LI G C V     A  L  +
Sbjct: 556 ITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRD 615

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+  G+ PDVVT+N++IN  CK G + +   L   +   G+ PD +TYN+L+   C  G 
Sbjct: 616 MIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGM 675

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
              A  L +  V      +  ++ IL++   K+   E+ +       + ++ PS+
Sbjct: 676 FDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGISFG----TAKVIPSI 726


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 259/491 (52%), Gaps = 5/491 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P M  + ++L    ++  +   V + + +++ G   D    NL++N +C+ G    A 
Sbjct: 144 PIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +L ++       + V++N ++ GLC   R  +   L  ++    C PN+VTFNTLI  L
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR        ++  +M +E G  C PD+  Y +IIDG+CK+G ++ A E+L +M    + 
Sbjct: 262 CRNGLFERVHEVLAQM-SEHG--CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PNV+ YN+++ G C  + WKEA+ L  EM       D VTFN ++++ C++G +D+V  L
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           LE M+  G  PD +TY ++++GFC  G I  A  L  SM S GC+ +  SY I++   C 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             +  DA  L  +M+ +   P+ +T+NTL++ L + G +  A++L+ +M +N   PD  +
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 498

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++T IDGL K G   EA+++   + N         Y+ +   L + GR+    ++F  ++
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
                 D V  + +I  LCK  + D+A D    M +  C+P+E T+  L++G        
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAK 618

Query: 557 KVVVLLHKMAA 567
           +   LL ++ +
Sbjct: 619 EAQELLSELCS 629



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 239/453 (52%), Gaps = 4/453 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN  TF  ++ GLC  GRI +A  +  +++   C P    ++ ++   CR+     ++++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            E M       C  D    N +++ +C+ G VD+A  LL ++       ++++YN+++ G
Sbjct: 169 LEAM---HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C    W + + L  EM+     P++VTFN +I Y C++G  ++V+ +L  M + G  PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
              Y +++DG C  G +  A E+   M S G + +V  YN ++   C  ++ ++A  L  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM  +      +T+N L+    Q G +   ++L+++M  +  +PD  T+ T I+G CK G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EAV + +++ +C C+    +Y  ++ GLC  GR   A +L  ++  +G  P+ VT +
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I++LCK+G +++A +LL  M    C P  +++ T++ G  +  K  + + LL+ M   
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM-VN 524

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           K +  +  + S +   LS++ +  + +  F ++
Sbjct: 525 KGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 209/434 (48%), Gaps = 9/434 (2%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF C         + S+  +L  L   K++  V  L   +      P++   N LI  LC
Sbjct: 209 FFGC------EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           + G+      VL ++     TP+   +  +I+G+C EG +  A  +  ++  +   PNVV
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            +NT++ GLC       A +L  EM   F   C  D VT+N ++D  C++G VD+  ELL
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEM---FQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            QM      P+VITY ++I GFC      EA  L   M   G +P+ V++  ++   C  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G+      L+  MIQ+G  P+ VT+N+L++  C  G + +A EL   M+  GC  D+ SY
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           + +I+   K  K E+A+ L   M+++ I P+ I Y+++   L + G +   +++ D ++ 
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             +  D+  +   I  LCK      A+  F  + +  C     TY  LI GL   G  K 
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 488 ACKLFHRLQHKGPI 501
           A +L   L  +G +
Sbjct: 620 AQELLSELCSRGAL 633



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 155/307 (50%), Gaps = 3/307 (0%)

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+ YN+++ G+C       A+ L   +    V P+  TF  ++   C  G++     +L+
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M  +G  P    Y+ +++  C  G    +  +  +M +KGC  D  + N+++NA C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            V++AV L R++        +++YN +L GL      GD  +L+D+M   D  P+  TF 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T I  LC+NG      +V   +    C   I  Y  +I+G+CK G L+ A ++ +R+   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P+VV  +T++  LC   +  +A +LL +M  K+C   +VTF  L+  F QN    +V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 559 VVLLHKM 565
           + LL +M
Sbjct: 376 IELLEQM 382



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 162/344 (47%), Gaps = 3/344 (0%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           VV YN+++ G C+ G   +            + PN  T+  ++ G C      +A  +  
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM   G  P    ++ ++   C+ G      R+LE M  +G   DT   N +++  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            +  A  L   +   GC  D+ SYN ++   C  ++  D   L  EM+     P+++T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL+  L + G      +++ +M  +   PD   +AT IDG+CK G +  A ++   + + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +  +  YN ++ GLC   R K A +L   +  K    D VT + ++ + C+ G +D+ 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            +LL  M +  C+P  +T+ T++ GF +     + V+LL  M++
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 5/255 (1%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           LS     D  +    +N   K G I  +EAV     M      P   S+TI+L  L    
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLI--DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           ++     L  ++   G  P+    N LIN LCK G+   A  +L ++L +  +P+ ++++
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I+GL   G+  EA  L   +      PN + ++++   L R       +++F+ + + 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD- 559

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                + D V YN++I  LCK    D+A +    M      PN  TY  LI G       
Sbjct: 560 --TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 276 KEAKCLFIEMMDNGV 290
           KEA+ L  E+   G 
Sbjct: 618 KEAQELLSELCSRGA 632


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 272/520 (52%), Gaps = 34/520 (6%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  +  M++ +  P   +F +    L +  +    ++L + +  +G  PD  +   +I
Sbjct: 160 DALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVI 219

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L   G  + A ++L  +L      +  TFN L+ GLC  GR+ EAARL  ++    C 
Sbjct: 220 HALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCM 279

Query: 184 PNVVTFNTLINGLCRTR--------------------NTLV-----------ALKLFEEM 212
           P+VVT+  L+ GLCRTR                    NT++           A +L+E M
Sbjct: 280 PSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMM 339

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
            ++    C PDV TY+ ++ GLCK G    A  +L +M+++   PN++TY++L+  FC  
Sbjct: 340 GSKG---CPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRN 396

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
             W +A+ +  +M+  G   +   +N +I   CKDGK+D+  RL++ M  +G  PD  TY
Sbjct: 397 GMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTY 456

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N+++   C    +  A  +F +++ +G   +  +YN LI+A  ++ + ++ + L  EML 
Sbjct: 457 NTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLL 516

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
              +  VI+YN L+  L + GN+  ++ L+++M    + P++F++   I+ LCK G V +
Sbjct: 517 HGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRD 576

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A+++ + + N      I TYN LINGLCK+G    A  L  +L ++   PD+VT + +I 
Sbjct: 577 ALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 636

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           W CK   +D A  LL    +   VP+E T+  +++ FV+ 
Sbjct: 637 WHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/509 (29%), Positives = 258/509 (50%), Gaps = 12/509 (2%)

Query: 63  NEAVYFFDCMIK-MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
             A++  D M +    SP   S+ ++L+ LA+   +   + L++R+  + + P  F   +
Sbjct: 123 GRALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 182

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
               LC++G    A  +L  + R    P+ V +  +I+ L A+G + EAA L  ++ +  
Sbjct: 183 AARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG 242

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C  +V TFN L+ GLC       A +L + M+ +    C P VVTY  ++ GLC+    D
Sbjct: 243 CAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQG---CMPSVVTYGFLLQGLCRTRQAD 299

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC--LFIEMMDNGVQPDVVTFNA 299
           +A  +L ++ +     NV+  N++I G  C+ + K A+   L+  M   G  PDV T++ 
Sbjct: 300 EACAMLGRLPE----VNVVMLNTVIRG--CLTEGKLARATELYEMMGSKGCPPDVHTYSI 353

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +++  CK G+     R+L+ M ++G  P+ VTY++L+  FC  G    AR +   M++KG
Sbjct: 354 LMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKG 413

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              +   YN +I A CKD K++ A  L +EM S+  +P + TYNT++  L     + +A 
Sbjct: 414 FSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAE 473

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            +   +    VV +  T+ T I  L +NG   E +++   +    C+L + +YN LI  L
Sbjct: 474 HIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKAL 533

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK G +  +  L   +  KG  P+  + + +I+ LCK G++  A +L  +M  +   P  
Sbjct: 534 CKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDI 593

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           VT+ TL+ G  +       + LL K+  E
Sbjct: 594 VTYNTLINGLCKVGWTHAALNLLEKLPNE 622



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 201/421 (47%), Gaps = 34/421 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL---------------- 107
           EA    D M+     P + ++  LL  L + +Q D   ++  RL                
Sbjct: 265 EAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCL 324

Query: 108 ---------------NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
                           S G  PD+   ++L++ LCK+G    A  +L  +      PN V
Sbjct: 325 TEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIV 384

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T++ L++  C  G   +A  +  ++       N   +N +I  LC+      A +L +EM
Sbjct: 385 TYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEM 444

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
            ++    CKPD+ TYN++I  LC +  +++A+ +   + +  +  N ITYN+LI      
Sbjct: 445 KSQG---CKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRN 501

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
             W+E   L  EM+ +G Q DV+++N +I   CK+G +D+   LLE M+ +G+ P+  +Y
Sbjct: 502 GRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSY 561

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N L++  C  G++  A EL   M+++G   D+ +YN LIN  CK      A+ L  ++ +
Sbjct: 562 NMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPN 621

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           E + P ++TYN L+S   +V  L DA  L+DK     +VP+  T+   +    +    LE
Sbjct: 622 ENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQTVNLE 681

Query: 453 A 453
            
Sbjct: 682 G 682



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 221/459 (48%), Gaps = 8/459 (1%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R   +P+  ++N +++ L       +A  L++++      P   TF      LCR     
Sbjct: 135 RFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAG 194

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            AL L   M       C PD V Y ++I  L   G V +A  LL +M       +V T+N
Sbjct: 195 DALALLRGMARHG---CVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFN 251

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            L+ G C +   +EA  L   MM  G  P VVT+  ++   C+  + D+       M+ R
Sbjct: 252 DLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA----MLGR 307

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
               + V  N+++ G    G+++RA EL+  M SKGC  DV++Y+IL++  CK  +   A
Sbjct: 308 LPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSA 367

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           V +  EM  +   P+++TY+TLL    + G   DA  ++D+M       +S  +   I  
Sbjct: 368 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYA 427

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LCK+G + +A ++ Q +++  C+  I TYN +I  LC    ++ A  +F  L  +G + +
Sbjct: 428 LCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVAN 487

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            +T +T+IH L + G+  +   L  +M    C    +++  L++   +     + + LL 
Sbjct: 488 GITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLE 547

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +M  + +  ++ S  + +++ L K  K R+ L   + +L
Sbjct: 548 EMVTKGIKPNNFSY-NMLINELCKAGKVRDALELSKEML 585



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 142/278 (51%), Gaps = 5/278 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A    D M+    S     +  ++  L K+ + D    L + + S G  PD+   N +
Sbjct: 400 DDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTM 459

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  LC   +   A  +   ++      N +T+N LI+ L   GR  E  RL  ++ +  C
Sbjct: 460 IYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGC 519

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +V+++N LI  LC+  N   ++ L EEMV +     KP+  +YN +I+ LCK G V  
Sbjct: 520 QLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG---IKPNNFSYNMLINELCKAGKVRD 576

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMI 301
           A EL  +M ++ + P+++TYN+LI G C V  W  A    +E + N  V PD+VT+N +I
Sbjct: 577 ALELSKEMLNQGLTPDIVTYNTLINGLCKV-GWTHAALNLLEKLPNENVHPDIVTYNILI 635

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
           +++CK   +D    LL+  I  G+ P+  T+  ++  F
Sbjct: 636 SWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF 673



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 3/215 (1%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           H   N    EA + F  +I+        ++  L+  L +N ++   + L   +  +G   
Sbjct: 462 HLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQL 521

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D+   N LI  LCK G    +  +L  ++     PN  ++N LIN LC  G++ +A  L 
Sbjct: 522 DVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELS 581

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           K++      P++VT+NTLINGLC+   T  AL L E++ NE      PD+VTYN +I   
Sbjct: 582 KEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN---VHPDIVTYNILISWH 638

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           CK   +D A  LL +     I PN  T+  ++  F
Sbjct: 639 CKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF 673


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 259/491 (52%), Gaps = 5/491 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P M  + ++L    ++  +   V + + +++ G   D    NL++N +C+ G    A 
Sbjct: 144 PIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +L ++       + V++N ++ GLC   R  +   L  ++    C PN+VTFNTLI  L
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR        ++  +M +E G  C PD+  Y +IIDG+CK+G ++ A E+L +M    + 
Sbjct: 262 CRNGLFERVHEVLAQM-SEHG--CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PNV+ YN+++ G C  + WKEA+ L  EM       D VTFN ++++ C++G +D+V  L
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           LE M+  G  PD +TY ++++GFC  G I  A  L  SM S GC+ +  SY I++   C 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             +  DA  L  +M+ +   P+ +T+NTL++ L + G +  A++L+ +M +N   PD  +
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 498

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++T IDGL K G   EA+++   + N         Y+ +   L + GR+    ++F  ++
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
                 D V  + +I  LCK  + D+A D    M +  C+P+E T+  L++G        
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAK 618

Query: 557 KVVVLLHKMAA 567
           +   LL ++ +
Sbjct: 619 EAQELLSELCS 629



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 239/453 (52%), Gaps = 4/453 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN  TF  ++ GLC  GRI +A  +  +++   C P    ++ ++   CR+     ++++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            E M       C  D    N +++ +C+ G VD+A  LL ++       ++++YN+++ G
Sbjct: 169 LEAM---HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C    W + + L  EM+     P++VTFN +I Y C++G  ++V+ +L  M + G  PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
              Y +++DG C  G +  A E+   M S G + +V  YN ++   C  ++ ++A  L  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM  +      +T+N L+    Q G +   ++L+++M  +  +PD  T+ T I+G CK G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EAV + +++ +C C+    +Y  ++ GLC  GR   A +L  ++  +G  P+ VT +
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I++LCK+G +++A +LL  M    C P  +++ T++ G  +  K  + + LL+ M   
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM-VN 524

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           K +  +  + S +   LS++ +  + +  F ++
Sbjct: 525 KGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 209/434 (48%), Gaps = 9/434 (2%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF C         + S+  +L  L   K++  V  L   +      P++   N LI  LC
Sbjct: 209 FFGC------EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           + G+      VL ++     TP+   +  +I+G+C EG +  A  +  ++  +   PNVV
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            +NT++ GLC       A +L  EM   F   C  D VT+N ++D  C++G VD+  ELL
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEM---FQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            QM      P+VITY ++I GFC      EA  L   M   G +P+ V++  ++   C  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G+      L+  MIQ+G  P+ VT+N+L++  C  G + +A EL   M+  GC  D+ SY
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           + +I+   K  K E+A+ L   M+++ I P+ I Y+++   L + G +   +++ D ++ 
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             +  D+  +   I  LCK      A+  F  + +  C     TY  LI GL   G  K 
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 488 ACKLFHRLQHKGPI 501
           A +L   L  +G +
Sbjct: 620 AQELLSELCSRGAL 633



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 155/307 (50%), Gaps = 3/307 (0%)

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+ YN+++ G+C       A+ L   +    V P+  TF  ++   C  G++     +L+
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M  +G  P    Y+ +++  C  G    +  +  +M +KGC  D  + N+++NA C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            V++AV L R++        +++YN +L GL      GD  +L+D+M   D  P+  TF 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T I  LC+NG      +V   +    C   I  Y  +I+G+CK G L+ A ++ +R+   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P+VV  +T++  LC   +  +A +LL +M  K+C   +VTF  L+  F QN    +V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 559 VVLLHKM 565
           + LL +M
Sbjct: 376 IELLEQM 382



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 162/344 (47%), Gaps = 3/344 (0%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           VV YN+++ G C+ G   +            + PN  T+  ++ G C      +A  +  
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM   G  P    ++ ++   C+ G      R+LE M  +G   DT   N +++  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            +  A  L   +   GC  D+ SYN ++   C  ++  D   L  EM+     P+++T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL+  L + G      +++ +M  +   PD   +AT IDG+CK G +  A ++   + + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +  +  YN ++ GLC   R K A +L   +  K    D VT + ++ + C+ G +D+ 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            +LL  M +  C+P  +T+ T++ GF +     + V+LL  M++
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 5/255 (1%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           LS     D  +    +N   K G I  +EAV     M      P   S+TI+L  L    
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLI--DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           ++     L  ++   G  P+    N LIN LCK G+   A  +L ++L +  +P+ ++++
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I+GL   G+  EA  L   +      PN + ++++   L R       +++F+ + + 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD- 559

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                + D V YN++I  LCK    D+A +    M      PN  TY  LI G       
Sbjct: 560 --TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 276 KEAKCLFIEMMDNGV 290
           KEA+ L  E+   G 
Sbjct: 618 KEAQELLSELCSRGA 632


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/489 (30%), Positives = 258/489 (52%), Gaps = 5/489 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P M  + ++L    ++  +   V + + +++ G   D    NL++N +C+ G    A 
Sbjct: 144 PIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +L ++       + V++N ++ GLC   R  +   L  ++    C PN+VTFNTLI  L
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR        ++  +M +E G  C PD+  Y +IIDG+CK+G ++ A E+L +M    + 
Sbjct: 262 CRNGLFERVHEVLAQM-SEHG--CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PNV+ YN+++ G C  + WKEA+ L  EM       D VTFN ++++ C++G +D+V  L
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           LE M+  G  PD +TY ++++GFC  G I  A  L  SM S GC+ +  SY I++   C 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             +  DA  L  +M+ +   P+ +T+NTL++ L + G +  A++L+ +M +N   PD  +
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 498

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++T IDGL K G   EA+++   + N         Y+ +   L + GR+    ++F  ++
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
                 D V  + +I  LCK  + D+A D    M +  C+P+E T+  L++G        
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAK 618

Query: 557 KVVVLLHKM 565
           +   LL ++
Sbjct: 619 EAQELLSEL 627



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 239/453 (52%), Gaps = 4/453 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN  TF  ++ GLC  GRI +A  +  +++   C P    ++ ++   CR+     ++++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            E M       C  D    N +++ +C+ G VD+A  LL ++       ++++YN+++ G
Sbjct: 169 LEAM---HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C    W + + L  EM+     P++VTFN +I Y C++G  ++V+ +L  M + G  PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
              Y +++DG C  G +  A E+   M S G + +V  YN ++   C  ++ ++A  L  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM  +      +T+N L+    Q G +   ++L+++M  +  +PD  T+ T I+G CK G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EAV + +++ +C C+    +Y  ++ GLC  GR   A +L  ++  +G  P+ VT +
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I++LCK+G +++A +LL  M    C P  +++ T++ G  +  K  + + LL+ M   
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM-VN 524

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           K +  +  + S +   LS++ +  + +  F ++
Sbjct: 525 KGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 209/434 (48%), Gaps = 9/434 (2%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF C         + S+  +L  L   K++  V  L   +      P++   N LI  LC
Sbjct: 209 FFGC------EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           + G+      VL ++     TP+   +  +I+G+C EG +  A  +  ++  +   PNVV
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            +NT++ GLC       A +L  EM   F   C  D VT+N ++D  C++G VD+  ELL
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEM---FQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            QM      P+VITY ++I GFC      EA  L   M   G +P+ V++  ++   C  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G+      L+  MIQ+G  P+ VT+N+L++  C  G + +A EL   M+  GC  D+ SY
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           + +I+   K  K E+A+ L   M+++ I P+ I Y+++   L + G +   +++ D ++ 
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             +  D+  +   I  LCK      A+  F  + +  C     TY  LI GL   G  K 
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 488 ACKLFHRLQHKGPI 501
           A +L   L  +G +
Sbjct: 620 AQELLSELCSRGAL 633



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 152/307 (49%), Gaps = 3/307 (0%)

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+ YN+++ G+C      +            V P+  TF  ++   C  G++     +L+
Sbjct: 79  VVAYNAMVAGYC---RAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M  +G  P    Y+ +++  C  G    +  +  +M +KGC  D  + N+++NA C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            V++AV L R++        +++YN +L GL      GD  +L+D+M   D  P+  TF 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T I  LC+NG      +V   +    C   I  Y  +I+G+CK G L+ A ++ +R+   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P+VV  +T++  LC   +  +A +LL +M  K+C   +VTF  L+  F QN    +V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 559 VVLLHKM 565
           + LL +M
Sbjct: 376 IELLEQM 382



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 162/344 (47%), Gaps = 3/344 (0%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           VV YN+++ G C+ G   +            + PN  T+  ++ G C      +A  +  
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM   G  P    ++ ++   C+ G      R+LE M  +G   DT   N +++  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            +  A  L   +   GC  D+ SYN ++   C  ++  D   L  EM+     P+++T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL+  L + G      +++ +M  +   PD   +AT IDG+CK G +  A ++   + + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +  +  YN ++ GLC   R K A +L   +  K    D VT + ++ + C+ G +D+ 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            +LL  M +  C+P  +T+ T++ GF +     + V+LL  M++
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 5/255 (1%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           LS     D  +    +N   K G I  +EAV     M      P   S+TI+L  L    
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLI--DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           ++     L  ++   G  P+    N LIN LCK G+   A  +L ++L +  +P+ ++++
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I+GL   G+  EA  L   +      PN + ++++   L R       +++F+ + + 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD- 559

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                + D V YN++I  LCK    D+A +    M      PN  TY  LI G       
Sbjct: 560 --TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 276 KEAKCLFIEMMDNGV 290
           KEA+ L  E+   G 
Sbjct: 618 KEAQELLSELCSRGA 632


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/489 (30%), Positives = 258/489 (52%), Gaps = 5/489 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P M  + ++L    ++  +   V + + +++ G   D    NL++N +C+ G    A 
Sbjct: 144 PIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +L ++       + V++N ++ GLC   R  +   L  ++    C PN+VTFNTLI  L
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR        ++  +M +E G  C PD+  Y +IIDG+CK+G ++ A E+L +M    + 
Sbjct: 262 CRNGLFERVHEVLAQM-SEHG--CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PNV+ YN+++ G C  + WKEA+ L  EM       D VTFN ++++ C++G +D+V  L
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           LE M+  G  PD +TY ++++GFC  G I  A  L  SM S GC+ +  SY I++   C 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             +  DA  L  +M+ +   P+ +T+NTL++ L + G +  A++L+ +M +N   PD  +
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 498

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++T IDGL K G   EA+++   + N         Y+ +   L + GR+    ++F  ++
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
                 D V  + +I  LCK  + D+A D    M +  C+P+E T+  L++G        
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAK 618

Query: 557 KVVVLLHKM 565
           +   LL ++
Sbjct: 619 EAQELLSEL 627



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 239/453 (52%), Gaps = 4/453 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN  TF  ++ GLC  GRI +A  +  +++   C P    ++ ++   CR+     ++++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            E M       C  D    N +++ +C+ G VD+A  LL ++       ++++YN+++ G
Sbjct: 169 LEAM---HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C    W + + L  EM+     P++VTFN +I Y C++G  ++V+ +L  M + G  PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
              Y +++DG C  G +  A E+   M S G + +V  YN ++   C  ++ ++A  L  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM  +      +T+N L+    Q G +   ++L+++M  +  +PD  T+ T I+G CK G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EAV + +++ +C C+    +Y  ++ GLC  GR   A +L  ++  +G  P+ VT +
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I++LCK+G +++A +LL  M    C P  +++ T++ G  +  K  + + LL+ M   
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM-VN 524

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           K +  +  + S +   LS++ +  + +  F ++
Sbjct: 525 KGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 209/434 (48%), Gaps = 9/434 (2%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF C         + S+  +L  L   K++  V  L   +      P++   N LI  LC
Sbjct: 209 FFGC------EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           + G+      VL ++     TP+   +  +I+G+C EG +  A  +  ++  +   PNVV
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            +NT++ GLC       A +L  EM   F   C  D VT+N ++D  C++G VD+  ELL
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEM---FQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            QM      P+VITY ++I GFC      EA  L   M   G +P+ V++  ++   C  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G+      L+  MIQ+G  P+ VT+N+L++  C  G + +A EL   M+  GC  D+ SY
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           + +I+   K  K E+A+ L   M+++ I P+ I Y+++   L + G +   +++ D ++ 
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             +  D+  +   I  LCK      A+  F  + +  C     TY  LI GL   G  K 
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 488 ACKLFHRLQHKGPI 501
           A +L   L  +G +
Sbjct: 620 AQELLSELCSRGAL 633



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 152/307 (49%), Gaps = 3/307 (0%)

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+ YN+++ G+C      +            V P+  TF  ++   C  G++     +L+
Sbjct: 79  VVAYNAMVAGYC---RAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M  +G  P    Y+ +++  C  G    +  +  +M +KGC  D  + N+++NA C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            V++AV L R++        +++YN +L GL      GD  +L+D+M   D  P+  TF 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T I  LC+NG      +V   +    C   I  Y  +I+G+CK G L+ A ++ +R+   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P+VV  +T++  LC   +  +A +LL +M  K+C   +VTF  L+  F QN    +V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 559 VVLLHKM 565
           + LL +M
Sbjct: 376 IELLEQM 382



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 162/344 (47%), Gaps = 3/344 (0%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           VV YN+++ G C+ G   +            + PN  T+  ++ G C      +A  +  
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM   G  P    ++ ++   C+ G      R+LE M  +G   DT   N +++  C  G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            +  A  L   +   GC  D+ SYN ++   C  ++  D   L  EM+     P+++T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL+  L + G      +++ +M  +   PD   +AT IDG+CK G +  A ++   + + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +  +  YN ++ GLC   R K A +L   +  K    D VT + ++ + C+ G +D+ 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            +LL  M +  C+P  +T+ T++ GF +     + V+LL  M++
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 5/255 (1%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           LS     D  +    +N   K G I  +EAV     M      P   S+TI+L  L    
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLI--DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           ++     L  ++   G  P+    N LIN LCK G+   A  +L ++L +  +P+ ++++
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I+GL   G+  EA  L   +      PN + ++++   L R       +++F+ + + 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD- 559

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                + D V YN++I  LCK    D+A +    M      PN  TY  LI G       
Sbjct: 560 --TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 276 KEAKCLFIEMMDNGV 290
           KEA+ L  E+   G 
Sbjct: 618 KEAQELLSELCSRGA 632


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 146/387 (37%), Positives = 217/387 (56%), Gaps = 6/387 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + AV  F+ M+ M+P P    F  +L+ L KNK+Y TV+SLFK+   NG+ PDL  L++L
Sbjct: 40  HHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSIL 99

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C     + AF V   IL+  F P+ +T N LI GLC  G I +      ++     
Sbjct: 100 INCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGF 159

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + V++ TLINGLC+   T    +L  ++    G   KPDVV YN+II+ LCK+  +  
Sbjct: 160 QLDQVSYGTLINGLCKAGETKAVARLLRKLE---GHSVKPDVVMYNTIINSLCKNKLLGD 216

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++  +M  + I+P+V+TY +LI GFC +   KEA  L  EM    + PDV TF+ +I+
Sbjct: 217 ACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLID 276

Query: 303 YNCKDGK---MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
              K+GK   +D+   L E M  + + PD VTYNSL+DG C    + RA  L   M   G
Sbjct: 277 ALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHG 336

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + DVYSY IL++  CK  ++E A   ++ +L +    +V  YN +++GL + G  G+A+
Sbjct: 337 IQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAM 396

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCK 446
            L  KM+    +P++ TF T I  L +
Sbjct: 397 DLKSKMEGKGCMPNAITFRTIICALSE 423



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 210/389 (53%), Gaps = 6/389 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P T  FN +++ L    R      LFK+       P++ T + LIN  C   +  +A  +
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F  ++        PD +T N++I GLC  G + K      Q+  +    + ++Y +LI G
Sbjct: 116 FANILKRG---FHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLING 172

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C   + K    L  ++  + V+PDVV +N +IN  CK+  +     +   MI +G++PD
Sbjct: 173 LCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPD 232

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK---VEDAVC 385
            VTY +L+ GFC++G++  A  L   M  K    DVY++++LI+A  K+ K   V++A+ 
Sbjct: 233 VVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMS 292

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L+ EM  + + P ++TYN+L+ GL +  +L  A+ L+ +M+ + + PD +++   +DGLC
Sbjct: 293 LFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLC 352

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G +  A + FQ +    C L +  YN +INGLCK G    A  L  +++ KG +P+ +
Sbjct: 353 KGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAI 412

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           T  T+I  L ++ + DKA  +L +M A+ 
Sbjct: 413 TFRTIICALSEKDENDKAEKILREMIARG 441



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 203/391 (51%), Gaps = 6/391 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P    FN +++ L + +     + LF++   E   I  PD+ T + +I+  C    +  A
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQF--EPNGIT-PDLCTLSILINCFCHQAHITLA 112

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +   +  R  +P+ IT N+LI G C   + K+      +++  G Q D V++  +IN 
Sbjct: 113 FSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLING 172

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+   V RLL  +    V PD V YN++++  C    +  A +++  M+ KG   D
Sbjct: 173 LCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPD 232

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN---LGDALK 420
           V +Y  LI+  C   K+++A  L  EM  + I P V T++ L+  L + G    + +A+ 
Sbjct: 233 VVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMS 292

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L ++M+  +++PD  T+ + IDGLCKN  +  A+ + + ++    +  + +Y  L++GLC
Sbjct: 293 LFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLC 352

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K GRL+ A + F  L  KG   +V   + MI+ LCK G   +A DL   ME K C+P+ +
Sbjct: 353 KGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAI 412

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           TF T++    + ++  K   +L +M A  L+
Sbjct: 413 TFRTIICALSEKDENDKAEKILREMIARGLL 443



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 2/285 (0%)

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           LM+     P T  +N+++       R      LF      G   D+ + +ILIN  C   
Sbjct: 48  LMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQA 107

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +  A  ++  +L     P  IT NTL+ GL   G +   L   D++       D  ++ 
Sbjct: 108 HITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYG 167

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T I+GLCK G      ++ + +     +  +  YN +IN LCK   L  AC ++  +  K
Sbjct: 168 TLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK 227

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PDVVT +T+IH  C  G+M +A  LL +M+ KN  P   TF  L+    +  KK  V
Sbjct: 228 GISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMV 287

Query: 559 --VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              + L +    K ++ D+   + ++D L K+      +   + +
Sbjct: 288 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEM 332



 Score = 42.4 bits (98), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 49/100 (49%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + S+TILL  L K  + +     F+ L   G   +++  N++IN LCK G+   A  
Sbjct: 338 QPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMD 397

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +  ++      PN +TF  +I  L  +    +A ++ +++
Sbjct: 398 LKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREM 437


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 159/511 (31%), Positives = 265/511 (51%), Gaps = 4/511 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+    + ++       F+ L S GL   +   N L+  L K+G    A+ +   ++
Sbjct: 30  FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 89

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           RS    N  T N +IN LC   +I         +      P+VVT+NTLIN  CR     
Sbjct: 90  RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A +L + M    G   KP V TYN+II+GLCK G   +AK +L +M    ++P+  TYN
Sbjct: 150 EAFELMDSMS---GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 206

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            L+   C  D+  +A+ +F EM   GV PD+V+F+A+I    K+G +D+  +    M   
Sbjct: 207 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 266

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD V Y  L+ GFC  G +S A ++   M+ +GC  DV +YN ++N  CK++ + +A
Sbjct: 267 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 326

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+ EM    + P   T+ TL++G  + GN+  A+ L + M   ++ PD  T+ T IDG
Sbjct: 327 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 386

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK   + +  +++  + + +      +Y  LING C MG +  A +L+  +  KG    
Sbjct: 387 FCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 446

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           ++TC+T++   C+ G   KA++ L +M  K  VP  +T+ TL+ GF++     +   L++
Sbjct: 447 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 506

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           KM    L + D+   + +++  S+  + +E 
Sbjct: 507 KMENSGL-LPDVITYNVILNGFSRQGRMQEA 536



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 258/492 (52%), Gaps = 3/492 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++  L KN++ +   S    +   G+FPD+   N LIN  C+ G+   AF ++  +
Sbjct: 99  TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 158

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P   T+N +INGLC  G+ + A  +  ++      P+  T+N L+   CR  N 
Sbjct: 159 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 218

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           + A ++F+EM ++ G +  PD+V+++++I  L K+G +D+A +    MK+  + P+ + Y
Sbjct: 219 MDAERIFDEMPSQ-GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 275

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             LI GFC      EA  +  EM++ G   DVVT+N ++N  CK+  + + + L   M +
Sbjct: 276 TILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTE 335

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RGV PD  T+ +L++G+   G +++A  LF  M+ +  + DV +YN LI+  CK  ++E 
Sbjct: 336 RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 395

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
              L+ +M+S RI P+ I+Y  L++G   +G + +A +L D+M          T  T + 
Sbjct: 396 VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVK 455

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G C+ G  ++A +    +          TYN LING  K   +  A  L +++++ G +P
Sbjct: 456 GYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP 515

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           DV+T + +++   ++G+M +A  ++L M  +   P   T+ +L+ G V  N   +   + 
Sbjct: 516 DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 575

Query: 563 HKMAAEKLVVSD 574
            +M     V  D
Sbjct: 576 DEMLQRGFVPDD 587



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 197/370 (53%), Gaps = 3/370 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   FD M      P + SF+ L+ +L+KN   D  +  F+ + + GL PD  +  +LI
Sbjct: 220 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 279

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+ G+ S A  V   +L      + VT+N ++NGLC E  + EA  LF ++      
Sbjct: 280 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 339

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+  TF TLING  +  N   A+ LFE M+       KPDVVTYN++IDG CK   ++K 
Sbjct: 340 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN---LKPDVVTYNTLIDGFCKGSEMEKV 396

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            EL   M  R I PN I+Y  LI G+C +    EA  L+ EM++ G +  ++T N ++  
Sbjct: 397 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 456

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G   K +  L  M+ +G+ PD +TYN+L++GF     + RA  L   M + G   D
Sbjct: 457 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 516

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN+++N   +  ++++A  +  +M+   + P   TY +L++G     NL +A ++ D
Sbjct: 517 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 576

Query: 424 KMQLNDVVPD 433
           +M     VPD
Sbjct: 577 EMLQRGFVPD 586



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 235/487 (48%), Gaps = 9/487 (1%)

Query: 21  NFWCSFGRPPNPKTDLSSHH----FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           N  C   +  N K+ LS       F D  +    +N   + G +   EA    D M    
Sbjct: 105 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL--EEAFELMDSMSGKG 162

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
             P + ++  ++  L K  +Y     +   +   G+ PD    N+L+   C+      A 
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 222

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +   +      P+ V+F+ LI  L   G + +A + F+ +      P+ V +  LI G 
Sbjct: 223 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 282

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR      ALK+ +EM+ +    C  DVVTYN+I++GLCK+  + +A EL  +M +R + 
Sbjct: 283 CRNGVMSEALKVRDEMLEQG---CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 339

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+  T+ +LI G+    +  +A  LF  M+   ++PDVVT+N +I+  CK  +M+KVN L
Sbjct: 340 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 399

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              MI R + P+ ++Y  L++G+C +G +S A  L+  MV KG    + + N ++   C+
Sbjct: 400 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 459

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
                 A      ML + I P  ITYNTL++G  +  N+  A  L++KM+ + ++PD  T
Sbjct: 460 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 519

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   ++G  + G + EA  +   +          TY  LING      LK A ++   + 
Sbjct: 520 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 579

Query: 497 HKGPIPD 503
            +G +PD
Sbjct: 580 QRGFVPD 586



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 159/352 (45%), Gaps = 35/352 (9%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
           N   N + ++ L+  +      +E    F  +   G+   +   N+++    K G +D  
Sbjct: 22  NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             + + +++ GV  +  T N +++  C   +I   +     M  KG   DV +YN LINA
Sbjct: 82  WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG-------------------- 413
            C+   +E+A  L   M  + ++P V TYN +++GL + G                    
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201

Query: 414 ---------------NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
                          N+ DA ++ D+M    VVPD  +F+  I  L KNG + +A++ F+
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            ++N         Y  LI G C+ G +  A K+   +  +G + DVVT +T+++ LCKE 
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 321

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            + +A++L  +M  +   P   TF TL+ G+ ++   +K V L   M    L
Sbjct: 322 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 373


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 273/535 (51%), Gaps = 10/535 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    +       +P +   T L+  L +  +      + +    +G   D+F  N L+
Sbjct: 53  EAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLV 112

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+ G    A  ++  +      P+  T+  LI GLC  GR+ +A  L   +    C 
Sbjct: 113 AGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQ 169

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VVT+  L+  +C++     A+K+ +EM  +    C P++VTYN II+G+C++  VD A
Sbjct: 170 PSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG---CTPNIVTYNVIINGMCREDRVDDA 226

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +++L ++      P+ ++Y +++ G C    W++ + LF EM++N   P+ VTF+ ++ +
Sbjct: 227 RQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRF 286

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G +++   +L+ M + G   +T   N +++  C  GR+  A E   +M S GC  D
Sbjct: 287 FCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPD 346

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             SY  ++   C+  + EDA  L  EM+ +   P+ +T+NT +  L Q G +  A+ LI+
Sbjct: 347 TISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIE 406

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M          T+   ++G C  G V  A+++F ++    CE    TY  L+ GLC   
Sbjct: 407 QMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAE 463

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           RL  A +L   +       +VVT + ++ + C++G +++A +L+  M    C P+ +TF 
Sbjct: 464 RLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFN 523

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           TLL G  ++    + + LLH + ++ + +  ++ SS +VD+LS++ +  E +  F
Sbjct: 524 TLLDGITEDCNSEEALELLHGLVSKGISLDTITYSS-IVDVLSREDRIEEAVQMF 577



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 285/557 (51%), Gaps = 15/557 (2%)

Query: 23  WCSFGRPPNPKTDLSSHHFKDG----TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS 78
           +C +GR    +  ++S          T + + L DR + G+     A+   D M++ +  
Sbjct: 115 YCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGD-----ALSLLDDMLRRECQ 169

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++T+LL  + K+  +   + +   + + G  P++   N++IN +C+      A  +
Sbjct: 170 PSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQI 229

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L R+    F P+TV++  ++ GLCA  R  +   LF ++    C PN VTF+ L+   CR
Sbjct: 230 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCR 289

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+++ + M +E G  C  +    N +I+ +CK G VD A E L  M     +P+
Sbjct: 290 GGMVERAIEVLDRM-SEHG--CTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPD 346

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            I+Y +++ G C    W++AK L  EM+     P+ VTFN  I   C+ G +D+   L+E
Sbjct: 347 TISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIE 406

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M + G +   VTYN+L++GFC+ GR+  A ELF S+    C  +  +Y  L+   C  +
Sbjct: 407 QMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAE 463

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +++ A  L  EM+      +V+T+N L+S   Q G + +A++L+ +M  +   P+  TF 
Sbjct: 464 RLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFN 523

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T +DG+ ++    EA+++   + +    L   TY+ +++ L +  R++ A ++FH +Q  
Sbjct: 524 TLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDM 583

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P  V  + ++  LCK  + D+A D    M + +C+P+E T+  L+ G  +     + 
Sbjct: 584 GMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEA 643

Query: 559 VVLLHKMAAEKLVVSDL 575
             +L ++ +  ++   L
Sbjct: 644 RYVLSELCSRGVLSKSL 660



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 145/328 (44%), Gaps = 38/328 (11%)

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           DD  EA  L       G  PDV     +I   C+ G+     R+L      G   D   Y
Sbjct: 49  DDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAY 108

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N+L+ G+C  GR+  AR L  SM       D Y+Y  LI   C   +V DA+ L  +ML 
Sbjct: 109 NTLVAGYCRYGRLDAARRLIASMPVP---PDAYTYTPLIRGLCDRGRVGDALSLLDDMLR 165

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
              +PSV+TY  LL  + +    G A+K++D+M+     P+  T+   I+G+C+   V +
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDD 225

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGL--------------------------------- 479
           A Q+   + +   +    +Y  ++ GL                                 
Sbjct: 226 ARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVR 285

Query: 480 --CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
             C+ G ++ A ++  R+   G   +   C+ +I+ +CK+G++D A + L +M +  C P
Sbjct: 286 FFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSP 345

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             +++ T+L+G  +  +      LL++M
Sbjct: 346 DTISYTTVLKGLCRAGRWEDAKELLNEM 373


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 157/563 (27%), Positives = 294/563 (52%), Gaps = 39/563 (6%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FFD M++  PSP + +F+ L+ +  K  + D   SL+  +   G+ PDL + ++LIN L 
Sbjct: 262 FFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321

Query: 128 K------------MGITSG-------------AFVVLG----------RILRSCFTPNTV 152
           +            M +  G             A+V +G          R+L+   +PN V
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T++ LINGLC  GR++EA  +F ++     +P+V+T+++LI+G C++ N      L+  M
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           + + G +  PDVV  + +I+GL + G +D+A     Q   R +  N   +N+LI G   +
Sbjct: 442 LRK-GHV--PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRL 498

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
              ++   ++I M    V PDVVT+  ++    + G++D+   L   ++++G +PD + Y
Sbjct: 499 KRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIY 558

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
            +L+DGFC     +   ++F  M S G   D+  YN+LIN   ++  VE+ + L RE++ 
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             + P ++TYNT++ G   +     A+KL + ++     P++ TF   ID  CK+G + +
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A+ +F ++     E  I TY+CLI+G  K    ++A +L+ ++      P++V+ S +I 
Sbjct: 679 AMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            LCK+G M++A+        ++ +P  + +  L+RG+ +  + ++ ++L   M    ++ 
Sbjct: 739 GLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMP 798

Query: 573 SDLSLSSKVVDLLSKDKKYRECL 595
            DL L   + +   +D + + C+
Sbjct: 799 DDL-LQKALAEYGFQDSQAKNCV 820



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 267/550 (48%), Gaps = 49/550 (8%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + SF  +  +L +++ +D    +F R+   G F +L VL          G   G+F   G
Sbjct: 89  VQSFCGIAHVLLRHRMFDPATRVFDRMV--GQFGNLEVL----------GEFHGSFRNYG 136

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
                   P+TV ++FL++  C  G +  A   F  ++      +    + +++ L  + 
Sbjct: 137 S------NPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSD 189

Query: 201 NTLVALKLFEEM-----VNEF--------GAICK--------------PDVVTYNSIIDG 233
              V L+ +EEM     V EF        G + K              P +V  N I+ G
Sbjct: 190 RIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LC    +  A +    M     +PN++T+++LI  +C      EA  L+  M++ G+ PD
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           +V ++ +IN   + GK+++ N L  + + RGV  D V ++S+MD +  VG + +A E++ 
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYT 369

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+ +G   +V +Y+ILIN  C++ +V +A  ++ ++L + + PSV+TY++L+ G  +  
Sbjct: 370 RMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ-VFQAIRNCKCELRIETY 472
           NL D   L   M     VPD    +  I+GL + G + EA++  FQA++     L    +
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKR-GLTLNNYLF 488

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI+G  ++ R +   K++  +     IPDVVT + ++  L ++G++D+A  L   +  
Sbjct: 489 NALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLK 548

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           K   P  + +CTL+ GF +    +  + +   M +   +  D+ + + ++++  ++    
Sbjct: 549 KGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNG-IFPDICIYNVLINMFFREGCVE 607

Query: 593 ECLNQFRHLL 602
             L   R ++
Sbjct: 608 NVLELLREII 617


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 161/528 (30%), Positives = 275/528 (52%), Gaps = 12/528 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A + FD M++    P + +F  +L  L +        +L  ++   G+  + F  N+ I
Sbjct: 98  DARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWI 157

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC+ G    A V L   + +   P+ VT+N L+ GLC + ++ EAA+  +++    C 
Sbjct: 158 RGLCEGGRLEEA-VALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCI 216

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+  T+NT+I+G C+      A +L ++ +  F     PD VTY S+I+GLC +G V++A
Sbjct: 217 PDDFTYNTIIDGYCKRDMLQEATELLKDAI--FKGFV-PDRVTYCSLINGLCAEGDVERA 273

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            EL  + + +++ P+++ YNSL+ G C       A  +  EM+++G  PD+ T+N +IN 
Sbjct: 274 LELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVING 333

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G +     ++   I +G  PD  T+N+++DG+C   ++  A +L   M   G   D
Sbjct: 334 LCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPD 393

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN ++N  CK  K ++    + EM+ +  RP+ ITYN L+    ++  L +A  +I 
Sbjct: 394 AITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIV 453

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M  + +VPD+ +F T I G C+NG +  A  +FQ +         +T+N LI       
Sbjct: 454 RMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKL 513

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            ++ A K+F  +  KG  PD+ T   ++   CK   +D+A   L +M +K  VPS  TF 
Sbjct: 514 NMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFG 573

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD-LLSKDKK 590
            +L     N++ S+ V ++H M    +V        +VVD +LS DKK
Sbjct: 574 RVLNSLAMNHRVSEAVAIIHIMVRMGVV-------PEVVDTILSTDKK 614



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 241/469 (51%), Gaps = 4/469 (0%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G  P     N +++ L        A  V  R+L +   P+  T    I   C  GR   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
            RL + L    CD   + + T++ GL    +   A  LF+EM+        PDV T+N++
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRD---VFPDVATFNNV 121

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           +  LC+ G + ++  LL ++  R ++ N  T N  I G C     +EA  L +E MD  +
Sbjct: 122 LHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVAL-VESMDAYI 180

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PDVVT+N ++   CKD K+ +  + L  M+ +G  PD  TYN+++DG+C    +  A E
Sbjct: 181 APDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATE 240

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           L    + KG   D  +Y  LIN  C +  VE A+ L+ E  ++ ++P ++ YN+L+ GL 
Sbjct: 241 LLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLC 300

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + G +  AL+++++M  +   PD +T+   I+GLCK G + +A  V            + 
Sbjct: 301 RQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVF 360

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           T+N +I+G CK  +L +A +L  R+   G  PD +T +++++ LCK G+  + N+   +M
Sbjct: 361 TFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEM 420

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
             K C P+ +T+  L+  F + N+  +   ++ +M+ + LV   +S ++
Sbjct: 421 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNT 469



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 201/416 (48%), Gaps = 37/416 (8%)

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +++F C P    +N +++ L  T     A K++  M++   A   PD  T+   I   C 
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLS---AGVAPDARTHTVRIKSFCI 57

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G    A  LL  + +R  +   + Y +++ G        +A+ LF EM+   V PDV T
Sbjct: 58  TGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVAT 117

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRG-------------------------------- 324
           FN +++  C+ G + +   LL  +++RG                                
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD 177

Query: 325 --VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
             + PD VTYN+LM G C   ++  A +    M+++GC  D ++YN +I+  CK   +++
Sbjct: 178 AYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQE 237

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L ++ + +   P  +TY +L++GL   G++  AL+L ++ Q  D+ PD   + + + 
Sbjct: 238 ATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVK 297

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLC+ G +L A+QV   +    C   I TYN +INGLCKMG +  A  + +    KG +P
Sbjct: 298 GLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLP 357

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           DV T +TMI   CK  ++D A  L+  M      P  +T+ ++L G  +  K  +V
Sbjct: 358 DVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEV 413



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 2/206 (0%)

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P+   YN ++  L        A K+  +M    V PD+ T    I   C  G    A+++
Sbjct: 8   PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
            +++    C+++   Y  ++ GL   G    A  LF  +  +   PDV T + ++H LC+
Sbjct: 68  LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +G + ++  LL  +  +    ++ T    +RG  +  +  + V L+  M A   +  D+ 
Sbjct: 128 KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDA--YIAPDVV 185

Query: 577 LSSKVVDLLSKDKKYRECLNQFRHLL 602
             + ++  L KD K +E     R ++
Sbjct: 186 TYNTLMRGLCKDSKVQEAAQYLRRMM 211


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 158/505 (31%), Positives = 261/505 (51%), Gaps = 4/505 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +  A+Y FD M K    P + S   LL  L KN +  T   +++++   G+ PD+F++++
Sbjct: 172 TKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSI 231

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++N  CK G    A   + ++      PN VT++ LING  + G +  A  + K ++   
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              NVVT+  LI G C+      A K+   M  E  A   PD   Y  +IDG C+ G +D
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE--AALVPDERAYGVLIDGYCRTGKID 349

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  LL +M    +  N+   NSLI G+C   +  EA+ +   M+D  ++PD  ++N ++
Sbjct: 350 DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLL 409

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C++G   +   L + M+Q G+ P  +TYN+L+ G C VG    A +++  M+  G  
Sbjct: 410 DGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVA 469

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D   Y+ L++   K +  E A  L++++L+     S IT+NT++SGL ++G + +A ++
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 529

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            DKM+     PD  T+ T IDG CK   V +A +V  A+        IE YN LI+GL K
Sbjct: 530 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFK 589

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             RL     L   +  +G  P++VT   +I   CKEG +DKA     +M  +N + + + 
Sbjct: 590 SRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM-TENGLSANII 648

Query: 542 FC-TLLRGFVQNNKKSKVVVLLHKM 565
            C T++ G  +  +  +  +L+ KM
Sbjct: 649 ICSTMVSGLYRLGRIDEANLLMQKM 673



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 258/510 (50%), Gaps = 16/510 (3%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    L+   + G+  ++EA    D M++    P + ++  LL  L +   +D  + 
Sbjct: 401 DSYSYNTLLDGYCREGH--TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           ++  +   G+ PD    + L++ L KM    GA  +   IL   FT + +TFN +I+GLC
Sbjct: 459 IWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 518

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G+++EA  +F K+    C P+ +T+ TLI+G C+  N   A K+   M  E      P
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMERE---XISP 575

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            +  YNS+I GL K   + +  +LL +M  R + PN++TY +LI G+C      +A   +
Sbjct: 576 SIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 635

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM +NG+  +++  + M++   + G++D+ N L++ M+  G  PD   +      +  +
Sbjct: 636 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI 695

Query: 343 GRISRARELFVSMVSKGCRHDVYS----YNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            +I+ +       + + C+  +      YNI I   CK  KV+DA   +  +  +   P 
Sbjct: 696 QKIADS-------LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
             TY TL+ G    GN+ +A +L D+M    +VP+  T+   I+GLCK+  V  A ++F 
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +        + TYN LI+G CK+G +  A KL  ++  +G  P VVT S +I+ LCK G
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHG 868

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            ++++  LL  M         + +CTL++G
Sbjct: 869 DIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 259/528 (49%), Gaps = 9/528 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN+  +E V  +    +   SP  T F ++L +  +       + +F  +   G  P L 
Sbjct: 138 GNVIWDELVGVYR---EFAFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLR 192

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N L+N L K G T  A  V  +++R    P+    + ++N  C +G++ EAA   KK+
Sbjct: 193 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 252

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                +PN+VT+++LING     +   A  + + M +E G     +VVTY  +I G CK 
Sbjct: 253 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM-SEKGV--SRNVVTYTLLIKGYCKQ 309

Query: 238 GFVDKAKELLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
             +D+A+++L  M++   + P+   Y  LI G+C      +A  L  EM+  G++ ++  
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
            N++IN  CK G++ +   ++  M+   + PD+ +YN+L+DG+C  G  S A  L   M+
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +G    V +YN L+   C+    +DA+ ++  M+   + P  + Y+TLL GLF++ N  
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFE 489

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A  L   +          TF T I GLCK G ++EA ++F  +++  C     TY  LI
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G CK   +  A K+   ++ +   P +   +++I  L K  ++ +  DLL +M  +   
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLT 609

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           P+ VT+  L+ G+ +     K      +M    L  + +  S+ V  L
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 156/590 (26%), Positives = 266/590 (45%), Gaps = 73/590 (12%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN+  K+G   ++ A Y +  MI++   P +   +I++    K+ + D      K++ +
Sbjct: 197 LLNNLVKNGE--THTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN 254

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ P++   + LIN    +G    A  VL  +     + N VT+  LI G C + ++ E
Sbjct: 255 LGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDE 314

Query: 170 AARLFKKLNVFAC-DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           A ++ + +   A   P+   +  LI+G CRT     A++L +EM+   G   K ++   N
Sbjct: 315 AEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML-RLG--LKTNLFICN 371

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           S+I+G CK G + +A+ ++ +M D N+ P+  +YN+L+ G+C      EA  L  +M+  
Sbjct: 372 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 431

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD----------- 337
           G++P V+T+N ++   C+ G  D   ++  LM++ GV PD V Y++L+D           
Sbjct: 432 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGA 491

Query: 338 ------------------------GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
                                   G C +G++  A E+F  M   GC  D  +Y  LI+ 
Sbjct: 492 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK   V  A  +   M  E I PS+  YN+L+SGLF+   L +   L+ +M +  + P+
Sbjct: 552 YCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPN 611

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   IDG CK G + +A   +  +        I   + +++GL ++GR+  A  L  
Sbjct: 612 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQ 671

Query: 494 RLQHKGPIPDV---------------------VTCSTM-----------IHWLCKEGQMD 521
           ++   G  PD                       +C T            I  LCK G++D
Sbjct: 672 KMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVD 731

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            A      +  K  VP   T+CTL+ G+       +   L  +M    LV
Sbjct: 732 DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 254/533 (47%), Gaps = 35/533 (6%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++ +L+    +  + D  V L   +   GL  +LF+ N LIN  CK G    A  V
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           + R++     P++ ++N L++G C EG   EA  L  K+     +P V+T+NTL+ GLCR
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 AL+++  M+    A   PD V Y++++DGL K    + A  L   +  R    +
Sbjct: 450 VGAFDDALQIWHLMMKXGVA---PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKS 506

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            IT+N++I G C +    EA+ +F +M D G  PD +T+  +I+  CK   + +  ++  
Sbjct: 507 RITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKG 566

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M +  ++P    YNSL+ G     R+    +L   M  +G   ++ +Y  LI+  CK+ 
Sbjct: 567 AMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 626

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM------------- 425
            ++ A   Y EM    +  ++I  +T++SGL+++G + +A  L+ KM             
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFL 686

Query: 426 ----------QLND---------VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
                     ++ D         ++P++  +   I GLCK G V +A + F  +      
Sbjct: 687 KSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFV 746

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
               TY  LI+G    G +  A +L   +  +G +P++VT + +I+ LCK   +D+A  L
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
              +  K   P+ VT+ TL+ G+ +         L  KM  E +  S ++ S+
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 183/382 (47%), Gaps = 16/382 (4%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG +    ++   K+ N+   +A      M +   SP +  +  L++ L K+++      
Sbjct: 541 DGITYRTLIDGYCKASNV--GQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTD 598

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L   +   GL P++     LI+  CK G+   AF     +  +  + N +  + +++GL 
Sbjct: 599 LLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLY 658

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK- 221
             GRI EA  L +K+      P+   F            + +     +++ +     CK 
Sbjct: 659 RLGRIDEANLLMQKMVDHGFFPDHECF----------LKSDIRYAAIQKIADSLDESCKT 708

Query: 222 ---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
              P+ + YN  I GLCK G VD A+     +  +   P+  TY +LI G+    +  EA
Sbjct: 709 FLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA 768

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             L  EM+  G+ P++VT+NA+IN  CK   +D+  RL   + Q+G+ P+ VTYN+L+DG
Sbjct: 769 FRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDG 828

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C +G +  A +L   M+ +G    V +Y+ LIN  CK   +E ++ L  +M+   +   
Sbjct: 829 YCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSK 888

Query: 399 VITYNTLLSGLFQVGNLGDALK 420
           +I Y TL+ G F+  N  +  K
Sbjct: 889 LIEYCTLVQGGFKTSNYNEMSK 910



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 194/419 (46%), Gaps = 19/419 (4%)

Query: 184 PNVVTFNTLINGLCRTR---------NTLVAL--------KLFEEMVNEFGAICKPDVVT 226
           PNV ++  L++ L R R         N LV L         +++E+V  +        V 
Sbjct: 100 PNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTV- 158

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           ++ I+    + G    A  +   M      P++ + NSL+       +   A  ++ +M+
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G+ PDV   + M+N  CKDGK+D+    ++ M   GV P+ VTY+SL++G+  +G + 
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVITYNTL 405
            A+ +   M  KG   +V +Y +LI   CK  K+++A  + R M  E  + P    Y  L
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + G  + G + DA++L+D+M    +  + F   + I+G CK G + EA  V   + +   
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +    +YN L++G C+ G    A  L  ++  +G  P V+T +T++  LC+ G  D A  
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           +   M      P EV + TLL G  +         L   + A     S ++ ++ +  L
Sbjct: 459 IWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 169/565 (29%), Positives = 283/565 (50%), Gaps = 46/565 (8%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++T L+  L K+   D   +L +++   G  P++     LI+ LCK      A   + 
Sbjct: 10  VVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVK 69

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLINGLCR 198
           R+LRS   P+ VT+N LI+GLC   R+ +A  + ++L  N FA  PN +T++TL+   CR
Sbjct: 70  RMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFA--PNHITYSTLVIWNCR 127

Query: 199 TRNTLVALKLFEEMVNEFGAICK-----------------------------------PD 223
            R    A  L  EM+   G++C                                    PD
Sbjct: 128 RRRLDQARGLIREMILR-GSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPD 186

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           VVTYN+ I GLCK G +DK  E+L +M    I P+V+T+ S+I G C  +   +A  +F 
Sbjct: 187 VVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFK 246

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM--IQRGVNPDTVTYNSLMDGFCL 341
            M++ G  PD +T++ M++   +  ++D V+ +LE M  ++ G   +  T+N+ +   C 
Sbjct: 247 GMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCR 306

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML-SERIRPSVI 400
            G+   A+ + + M+  G   ++ SYN +I+  CK   V+DA  L R+ML S   +P VI
Sbjct: 307 SGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVI 366

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDV-VPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            +NTL+SG  + G L  A +L+ +M+  ++ VPD  T+ T IDG  K G + +A  + Q 
Sbjct: 367 FFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQE 426

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           ++   C+  + TY  LING  K G  + A  LF  +  KG  PD++T +T++    K G 
Sbjct: 427 MQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGM 486

Query: 520 MDKANDLLLDMEAKN--CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           M KA  +   ++ K   C P  +T+  L+ G+ +     + + LL +M A        + 
Sbjct: 487 MSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTY 546

Query: 578 SSKVVDLLSKDKKYRECLNQFRHLL 602
           +  +  L   ++   + L  ++ +L
Sbjct: 547 NVLIAKLAETEEVPSKALAVYQQML 571



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 158/500 (31%), Positives = 245/500 (49%), Gaps = 58/500 (11%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           + +NG    +     LI+ LCK G    A  +L ++  +   PN VT+  LI+GLC   R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVV 225
             +A +  K++    C+P++VT+N+LI+GLC       A  + +E+V N F     P+ +
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFA----PNHI 116

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI-- 283
           TY++++   C+   +D+A+ L+ +M  R    N++ Y   I GFC      EA+C     
Sbjct: 117 TYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFC------EARCQSSRY 170

Query: 284 ------EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
                 EM+++G  PDVVT+N  I+  CK GK+DK   +LE M + G+ PD VT+ S++ 
Sbjct: 171 ECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIIS 230

Query: 338 GFCLVGRISRARELFVSMVSKGCRHD---------------------------------- 363
           G C   RI  A ++F  M+ +GC  D                                  
Sbjct: 231 GLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGC 290

Query: 364 ---VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
              VY++N  I A C+  K   A  +   M+     P++++YN ++ GL + GN+ DA K
Sbjct: 291 VMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWK 350

Query: 421 LIDKMQLNDVV-PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK-CELRIETYNCLING 478
           L  KM  +    PD   F T I G CK G + +A Q+   ++    C   + TYN LI+G
Sbjct: 351 LSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDG 410

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
             K G LK A  L   +Q  G  P+VVT + +I+   K G  ++A  L  +M AK C P 
Sbjct: 411 QSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPD 470

Query: 539 EVTFCTLLRGFVQNNKKSKV 558
            +T+ T+L  F +    SK 
Sbjct: 471 IITYNTVLSAFSKAGMMSKA 490



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 215/426 (50%), Gaps = 44/426 (10%)

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           D +VVT+ TLI+GLC++ +   A  L ++M +   A C P+VVTY ++IDGLCK      
Sbjct: 7   DASVVTYTTLIDGLCKSGDLDAAQALLQKMAD---AGCAPNVVTYTALIDGLCKARRPHD 63

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A + + +M      P+++TYNSLI G C  +   +A  +  E++ NG  P+ +T++ ++ 
Sbjct: 64  AIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVI 123

Query: 303 YNCKDGKMDKVNRLLELMIQRGVN------------------------------------ 326
           +NC+  ++D+   L+  MI RG                                      
Sbjct: 124 WNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGR 183

Query: 327 -PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD VTYN+ + G C  G++ +  E+   M   G   DV ++  +I+  CK  +++DA  
Sbjct: 184 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQ 243

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV--VPDSFTFATYIDG 443
           +++ ML     P  +TY+ +L  L +   L    ++++ MQ      V + +T   +I  
Sbjct: 244 VFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGA 303

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI-P 502
           LC++G    A  +   +        + +YN +I+GLCK G +  A KL  ++   G   P
Sbjct: 304 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKP 363

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN-CVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           DV+  +T+I   CK G++ +A+ LL++M+AKN CVP  VT+ TL+ G  +     +  +L
Sbjct: 364 DVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLL 423

Query: 562 LHKMAA 567
           L +M A
Sbjct: 424 LQEMQA 429



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 203/369 (55%), Gaps = 8/369 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS--NGLFPDLFVLN 120
           ++A   F  M++    P   +++I+L  L++  + DTV  + + + +   G   +++  N
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHN 298

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK-LNV 179
             I  LC+ G    A  +L  ++ S   PN +++NF+I+GLC  G + +A +L +K L+ 
Sbjct: 299 AFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS 358

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             C P+V+ FNTLI+G C+      A +L  EM  +   IC PDVVTYN++IDG  K G 
Sbjct: 359 GCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEM--KAKNICVPDVVTYNTLIDGQSKFGS 416

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           + +AK LL +M+     PNV+TY +LI G+     ++EA+ LF EM   G  PD++T+N 
Sbjct: 417 LKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNT 476

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGV--NPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           +++   K G M K   + + +  +    +PD +TY  L+DG+C      +   L   M +
Sbjct: 477 VLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTA 536

Query: 358 KGCRHDVYSYNILINANCKDQKV-EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           +G   D Y+YN+LI    + ++V   A+ +Y++ML +   PS   +N+L+    + G++ 
Sbjct: 537 RGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVN 596

Query: 417 DALKLIDKM 425
            A  ++ +M
Sbjct: 597 SARSMVQEM 605



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 138/288 (47%), Gaps = 4/288 (1%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M  NG    VVT+  +I+  CK G +D    LL+ M   G  P+ VTY +L+DG C   R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
              A +    M+  GC  D+ +YN LI+  C   +++DA  + +E++     P+ ITY+T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK---NGFVLEAVQVFQAIR 461
           L+    +   L  A  LI +M L   V +   +   I G C+        E     + I 
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           + +    + TYN  I+GLCK G+L    ++   +   G  PDVVT  ++I  LCK  ++D
Sbjct: 181 SGRIP-DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRID 239

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
            A  +   M  + CVP  +T+  +L    + N+   V  +L  M A K
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMK 287



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 43/293 (14%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR-LNSNGLFPDLFVLNLLINCLCKMG 130
           MI+    P + S+  ++  L K+   D    L ++ L+S    PD+   N LI+  CK G
Sbjct: 320 MIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAG 379

Query: 131 ITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
             S A  +L  +  ++   P+ VT+N LI+G    G + +A  L +++    C PNVVT+
Sbjct: 380 RLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTY 439

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
             LING  +      A  LF+EM  +    C PD++TYN+++    K G + KA+ +  Q
Sbjct: 440 AALINGYAKHGMYEEAESLFDEMSAKG---CFPDIITYNTVLSAFSKAGMMSKAEGVYQQ 496

Query: 250 MKDRN--INPNVITYNSLICGFCCVDD---------------WK---------------- 276
           +K++    +P+ ITY  LI G+C  +D               W                 
Sbjct: 497 LKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAET 556

Query: 277 -----EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
                +A  ++ +M+D    P    FN+++    + G ++    +++ M ++G
Sbjct: 557 EEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKG 609


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 270/535 (50%), Gaps = 10/535 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    +       +P +   T L+  L +  +      + +   ++G   D+F  N L+
Sbjct: 57  EAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLV 116

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+ G    A  ++  +      P+  T+  +I GLC  GR+ +A  L   +    C 
Sbjct: 117 AGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQ 173

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VVT+  L+  +C++     A+ + +EM  +    C P++VTYN II+G+C++G VD A
Sbjct: 174 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG---CTPNIVTYNVIINGMCREGRVDDA 230

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           KE+L ++      P++++Y +++ G C    W + K LF EM+D    P+ VTF+ ++ +
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G +++  ++L+ M Q G  P+T   N +++  C  GR+  A +   +M   GC  D
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             SY  ++   C+  + E A  L  EM+ +   P+ +T+NT +  L Q G +  A+KLI+
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 410

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M          T+   + G C  G V  A+++F    N  CE    TY  L+ GLC   
Sbjct: 411 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN---NLPCEPNTITYTTLLTGLCHAE 467

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           RL  A +L   +  K    + VT + ++ + C++G +++A +L+  M    C P+ +TF 
Sbjct: 468 RLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 527

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           TLL G  ++    + + LLH + ++ + +  ++ SS VVD+LS++ +  E +   
Sbjct: 528 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSS-VVDVLSREDRTEEAIQML 581



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 153/557 (27%), Positives = 284/557 (50%), Gaps = 15/557 (2%)

Query: 23  WCSFGRPPNPKTDLSSHHFKDG----TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS 78
           +C +GR    +  ++S          T I + L DR + G+     A+   D M++    
Sbjct: 119 YCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGD-----ALALLDDMLQRGCQ 173

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++T+LL  + K+  +   +++   + + G  P++   N++IN +C+ G    A  +
Sbjct: 174 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 233

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L R+    F P+ V++  ++ GLCA  R  +   LF ++    C PN VTF+ L+   CR
Sbjct: 234 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 293

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+++ ++M ++ G  C P+    N +I+ +CK G VD A + L  M     NP+
Sbjct: 294 GGMVERAIQVLQQM-SQHG--CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            I+Y +++ G C    W+ AK L  EM+     P+ VTFN  I   C+ G +++  +L+E
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 410

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           LM + G +   VTYN+L+ GFC+ GR+  A ELF ++    C  +  +Y  L+   C  +
Sbjct: 411 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAE 467

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +++ A  L   M+ +    + +T+N L+S   Q G + +A++L+++M  +   P+  TF 
Sbjct: 468 RLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 527

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T +DG+ K+    EA+++   + +    L   TY+ +++ L +  R + A ++ H +Q  
Sbjct: 528 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 587

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P V   + ++  LCK  + D+A D    M +  C+P+E T+  L+ G        + 
Sbjct: 588 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 647

Query: 559 VVLLHKMAAEKLVVSDL 575
             +L ++ A+ ++   L
Sbjct: 648 RYVLSELYAKGVLSKSL 664



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 146/328 (44%), Gaps = 38/328 (11%)

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           DD  EA  L       G  PDV     +I   C+ G+     R+L      G   D   Y
Sbjct: 53  DDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAY 112

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N+L+ G+C  GR+  AR L  SM       D Y+Y  +I   C   +V DA+ L  +ML 
Sbjct: 113 NTLVAGYCRYGRLDAARRLIASMPVP---PDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
              +PSV+TY  LL  + +    G+A+ ++D+M+     P+  T+   I+G+C+ G V +
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 229

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGL--------------------------------- 479
           A ++   + +   +  I +Y  ++ GL                                 
Sbjct: 230 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVR 289

Query: 480 --CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
             C+ G ++ A ++  ++   G  P+   C+ +I+ +CK+G++D A D L +M    C P
Sbjct: 290 FFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 349

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             +++ T+LRG  +  +      LL +M
Sbjct: 350 DTISYTTVLRGLCRAGRWEHAKELLPEM 377


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 179/632 (28%), Positives = 299/632 (47%), Gaps = 116/632 (18%)

Query: 63  NEAVYFFDCMIKMKPS--PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP------ 114
           ++AV  F   I   P+  P   + + L+  L K +QYD VVS++ ++ S  + P      
Sbjct: 22  SDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLS 81

Query: 115 -----------------------------DLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
                                        +++ LNL++   C+ G    A  +  ++ R+
Sbjct: 82  ALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN 141

Query: 146 --CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-CDPNVVTFNTLINGLCRTRNT 202
             C  P+ VT+N L+NG C   R+ EA  LF+ +     C PN+VT++ LI+  C++   
Sbjct: 142 YDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEV 201

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
              L L EEM  E     K DV  Y+S+I   C +G ++  +EL  +M  R ++PNV+TY
Sbjct: 202 GEGLGLLEEMEREG---LKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTY 258

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV--------------------------- 295
           + L+ G      W+EA  +  +M   GV+PDVV                           
Sbjct: 259 SCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQ 318

Query: 296 --------TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
                   T+N ++N  CK+ +MD    ++E+M+++G  PD VTYN+L+ G C  G+I  
Sbjct: 319 KGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHE 378

Query: 348 ARELFVSMVSKG--CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
           A +L+  ++S+    + DV++ N LI   CK+ +V DA  ++  M+   ++ +++TYN L
Sbjct: 379 AMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFL 438

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK------------------- 446
           + G      L +ALKL      +   P+S T++  I+GLCK                   
Sbjct: 439 IEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGI 498

Query: 447 -------NGFVL---------EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
                  N  +          +A  +FQ +RN    + + ++N +I+G  K G +K+A +
Sbjct: 499 RPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKE 558

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L   +     +PD VT S +I+   K G +D+A  L   M +   VP  V F +LL+G+ 
Sbjct: 559 LLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYG 618

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
              +  K++ LLH+M A+K VV D  L+S ++
Sbjct: 619 LKGETEKIISLLHQM-ADKDVVLDSKLTSTIL 649



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 210/417 (50%), Gaps = 1/417 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            FD M++ K SP + +++ L+  L +  ++     + K + + G+ PD+    +L + LC
Sbjct: 242 LFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLC 301

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    A  VL  +++    P T+T+N ++NGLC E R+ +A  + + +      P+ V
Sbjct: 302 KNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAV 361

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+NTL+ GLC       A+ L++ +++E   + KPDV T N++I GLCK+G V  A  + 
Sbjct: 362 TYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHV-KPDVFTCNNLIQGLCKEGRVHDAARIH 420

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M +  +  N++TYN LI G+       EA  L+   +++G  P+ +T++ MIN  CK 
Sbjct: 421 SSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKM 480

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             +     L   M   G+ P  + YN+LM   C    + +AR LF  M +     DV S+
Sbjct: 481 QMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSF 540

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           NI+I+   K   V+ A  L  EM    + P  +T++ L++   ++G L +A+ L +KM  
Sbjct: 541 NIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVS 600

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
              VP    F + + G    G   + + +   + +    L  +  + ++  LC M R
Sbjct: 601 CGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSR 657



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 179/389 (46%), Gaps = 40/389 (10%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N  + +A+   D M++    PG  ++ +++  L K  + D    + + +   G  PD   
Sbjct: 303 NGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVT 362

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCF--TPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            N L+  LC  G    A  +   +L   F   P+  T N LI GLC EGR+ +AAR+   
Sbjct: 363 YNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSS 422

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +       N+VT+N LI G    R  + ALKL++  V E G    P+ +TY+ +I+GLCK
Sbjct: 423 MVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAV-ESG--FSPNSMTYSVMINGLCK 479

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              +  A+ L  +MKD  I P VI YN+L+   C  D  ++A+ LF EM +     DVV+
Sbjct: 480 MQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVS 539

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           FN +I+   K G +     LL  M    + PD VT++ L++ F  +G +  A  L+  MV
Sbjct: 540 FNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMV 599

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           S  C H                                  P V+ +++LL G    G   
Sbjct: 600 S--CGH---------------------------------VPGVVVFDSLLKGYGLKGETE 624

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLC 445
             + L+ +M   DVV DS   +T +  LC
Sbjct: 625 KIISLLHQMADKDVVLDSKLTSTILACLC 653


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 258/526 (49%), Gaps = 7/526 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++   +  L +    D  + + K +   GL PD     LL++  CK   +  A ++
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +  S   PN  T+  LI+G   EG I EA R+  ++       NVVT+N +I G+ +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+ LF EM+    A  +PD  TYN +IDG  K   + KA ELL +MK R + P+
Sbjct: 394 AGEMAKAMSLFNEMLM---AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPS 450

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             TY+ LI G C   D ++A  +  +M+ NGV+P+V  +  +I    ++ + +    LL+
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           +MI  GV PD   YN L+ G C   ++  A+ L V M  KG + + ++Y   IN   K  
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG 570

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +++ A   +++MLS  I P+ + Y  L+ G   VGN  +AL     M    ++PD   ++
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I  L KNG   EA+ VF           +  YN LI+G CK G ++ A +L+  + H 
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690

Query: 499 GPIPDVVTCSTMI--HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
           G  P++V  +T+I  +  CK G + +A  L  +M +K   P    +C L+ G  +     
Sbjct: 691 GINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 750

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           K + L H+  A++  V  LS  + ++D   K  K  E    F  ++
Sbjct: 751 KALSLFHE--AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMV 794



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 274/542 (50%), Gaps = 12/542 (2%)

Query: 32  PKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTML 91
           P + L+ + F     I  F+    K GNI   EA+   D MI       + ++  ++  +
Sbjct: 338 PSSGLNPNRFTYTALIDGFI----KEGNI--EEALRIKDEMITRGLKLNVVTYNAMIGGI 391

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
           AK  +    +SLF  +   G+ PD +  NLLI+   K    + A  +L  +     TP+ 
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            T++ LI+GLC    + +A  +  ++      PNV  + TLI    +     +A++L + 
Sbjct: 452 FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M+   G +  PD+  YN +I GLC+   V++AK LL+ M ++ I PN  TY + I  +  
Sbjct: 512 MIAN-GVL--PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
             + + A+  F +M+ +G+ P+ V +  +I  +C  G   +     + M+++G+ PD   
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y++++      G+   A  +F+  +  G   DV+ YN LI+  CK+  +E A  LY EML
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 392 SERIRPSVITYNTLLS--GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
              I P+++ YNTL++  G  + GNL +A KL D+M    + PD + +   IDG  K G 
Sbjct: 689 HNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 748

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A+ +F   +  K    +  +N LI+  CK G++  A +LF  +  K   P++VT + 
Sbjct: 749 LEKALSLFHEAQQ-KSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTI 807

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I    K   M++A  L LDME +N +P+ +T+ +LL  + Q   + K++ L   M A  
Sbjct: 808 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 867

Query: 570 LV 571
           + 
Sbjct: 868 IA 869



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 263/531 (49%), Gaps = 13/531 (2%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           H S    +NE +   D MI+    P +  +  L+    +  +Y+  + L K + +NG+ P
Sbjct: 463 HSSDLQKANEVL---DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           DLF  N LI  LC+      A ++L  +      PN  T+   IN     G I  A R F
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           K +      PN V +  LI G C   NT+ AL  F+ M+ E G I  PD+  Y++II  L
Sbjct: 580 KDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML-EKGLI--PDIRAYSAIIHSL 636

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
            K+G   +A  + L+     + P+V  YNSLI GFC   D ++A  L+ EM+ NG+ P++
Sbjct: 637 SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNI 696

Query: 295 VTFNAMIN-YN-CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           V +N +IN Y  CK G + +  +L + MI +G++PD   Y  L+DG    G + +A  LF
Sbjct: 697 VVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 756

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
                K     + ++N LI++ CK  KV +A  L+ +M+ +++ P+++TY  L+    + 
Sbjct: 757 HEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKA 815

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI--RNCKCELRIE 470
             + +A +L   M+  +++P++ T+ + +    + G   + + +F+ +  R   C+    
Sbjct: 816 EMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAI-- 873

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            Y  + +  CK G+   A KL ++   +G   +      +I  LCKE Q+    +LL +M
Sbjct: 874 AYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 933

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
             +    S  T  TLL GF ++  + +   +L  M     V + LSL+  +
Sbjct: 934 GKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSI 984



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 246/505 (48%), Gaps = 9/505 (1%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D++V  ++    +    +L V ++ I+    +G  + A  V    +   F P  +  N L
Sbjct: 158 DSLVRCYREFGGS----NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNL 213

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           +  L     +    +++  +      P+V T+  +I   C+  + +    +  EM  E  
Sbjct: 214 MRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-- 271

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
             CKP++ TYN+ I GLC+ G VD+A E+   M ++ + P+  TY  L+ GFC     KE
Sbjct: 272 --CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           AK +F  M  +G+ P+  T+ A+I+   K+G +++  R+ + MI RG+  + VTYN+++ 
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G    G +++A  LF  M+  G   D ++YN+LI+   K   +  A  L  EM + ++ P
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           S  TY+ L+SGL    +L  A +++D+M  N V P+ F + T I    +      A+++ 
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +        +  YNCLI GLC+  +++ A  L   +  KG  P+  T    I+   K 
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G++  A     DM +   VP+ V +  L++G        + +    K   EK ++ D+  
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF-KCMLEKGLIPDIRA 628

Query: 578 SSKVVDLLSKDKKYRECLNQFRHLL 602
            S ++  LSK+ K +E +  F   L
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFL 653



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 214/418 (51%), Gaps = 8/418 (1%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           +   F+N   KSG I   E   +F  M+     P    +TIL+            +S FK
Sbjct: 558 TYGAFINLYSKSGEIQVAER--YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK 615

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            +   GL PD+   + +I+ L K G T  A  V  + L++   P+   +N LI+G C EG
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLIN--GLCRTRNTLVALKLFEEMVNEFGAICKPD 223
            I +A++L+ ++     +PN+V +NTLIN  G C++ N   A KLF+EM+++      PD
Sbjct: 676 DIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKG---ISPD 732

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
              Y  +IDG  K+G ++KA  L  + + +++  ++  +NSLI  FC      EA+ LF 
Sbjct: 733 GYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFD 791

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +M+D  + P++VT+  +I+   K   M++  +L   M  R + P+T+TY SL+  +  +G
Sbjct: 792 DMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIG 851

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
              +   LF  M ++G   D  +Y ++ +A CK+ K  +A+ L  + L E I+     ++
Sbjct: 852 NRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFD 911

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
            L+  L +   +   L+L+ +M   ++   S T  T + G  K+G   EA +V   ++
Sbjct: 912 ALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQ 969



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 213/448 (47%), Gaps = 39/448 (8%)

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL- 248
           + ++  L +TR     L++ + +V  +      ++  ++  ID     GF+++A  + + 
Sbjct: 140 DNMLEKLLQTRKP--PLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIA 197

Query: 249 ----------------------------------QMKDRNINPNVITYNSLICGFCCVDD 274
                                              M +  I P+V TY ++I   C V D
Sbjct: 198 SISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGD 257

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
             + K +  E M+   +P++ T+NA I   C+ G +D+   + +LM+++G+ PD  TY  
Sbjct: 258 VIKGKMVLSE-MEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTL 316

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L+DGFC   R   A+ +F SM S G   + ++Y  LI+   K+  +E+A+ +  EM++  
Sbjct: 317 LVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG 376

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           ++ +V+TYN ++ G+ + G +  A+ L ++M +  + PD++T+   IDG  K+  + +A 
Sbjct: 377 LKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKAC 436

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           ++   ++  K      TY+ LI+GLC    L+ A ++  ++   G  P+V    T+I   
Sbjct: 437 ELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAY 496

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
            +E + + A +LL  M A   +P    +  L+ G  +  K  +  +LL  M  EK +  +
Sbjct: 497 VQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM-GEKGIKPN 555

Query: 575 LSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                  ++L SK  + +     F+ +L
Sbjct: 556 AHTYGAFINLYSKSGEIQVAERYFKDML 583


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 169/588 (28%), Positives = 273/588 (46%), Gaps = 79/588 (13%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  F  M K   +P + ++T L+  L K  ++D    + + + + G  PD    + LI
Sbjct: 62  EALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLI 120

Query: 124 NCLCKMGITSGAF------------------------------------VVLGRILRSCF 147
           + LCK G    AF                                     VLG ++   F
Sbjct: 121 DGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF 180

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           TP  + FN +ING C    +  A +L + +    C PNV TF  LI GLC+      A +
Sbjct: 181 TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQ 240

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L E+MV      C P+VVTY+++I+GLCK G VD A EL   M+ RN  PNV+T+N LI 
Sbjct: 241 LLEKMVT---GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILID 297

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN- 326
           G C     +EA+ L+  M + G  PD++T+N++I+  CK  ++D+  +L + + + GV+ 
Sbjct: 298 GLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSA 357

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            + VTY++L  G+  +GR++ A  +F  +V KG   D+ +Y  LI   CK  +  + V L
Sbjct: 358 ANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVEL 417

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG--- 443
             EM S+   P V T + +L GLF+  +   A++L D M       D+  +   ++G   
Sbjct: 418 VEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMAR 477

Query: 444 -----------------------------------LCKNGFVLEAVQVFQAIRNCKCELR 468
                                              LC+ G   +A Q+   +        
Sbjct: 478 ASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAA 537

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + +YN L++GL ++ R   A ++F  +   GP P++ T + +I WLC   ++D A +L+ 
Sbjct: 538 VSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQ 597

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            M    C P   T  TL+ G+ ++ +      LL +M    L  +D +
Sbjct: 598 RMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTT 645



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/561 (26%), Positives = 266/561 (47%), Gaps = 39/561 (6%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++ IL+   +     D  + L + + SNG   +  V   L+  LC  G    A   
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              + + C  P+ +T+  L++ LC  G+  EA  + +++    C P+ VTF+TLI+GLC+
Sbjct: 67  FRAMAKDC-APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 199 TRNTLVALKLFEEMVNE--------FGAICK-------------------------PDVV 225
             +   A ++ E+++          F  I +                         P V+
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
            +N +I+G CK   +D A +LL  M ++   PNV T+  LI G C  +   EA+ L  +M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           +  G  P+VVT++ +IN  CK G++D    L +LM +R   P+ VT+N L+DG C   RI
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS-VITYNT 404
             AR+L+  M   GC  D+ +YN LI+  CK  +V++A  L++ +    +  +  +TY+T
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 365

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L  G   +G + DA ++   +      PD  T+ + I   CK    +E V++ + + +  
Sbjct: 366 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG 425

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
              R+ T + ++ GL +    + A +LF  +  +G   D +  + ++  + +  + +KA 
Sbjct: 426 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKAL 485

Query: 525 DLL---LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            +L   +D   +   PS      L+    Q  +      LLHKM +E+   + +S  + +
Sbjct: 486 AVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKM-SERGFAAAVSSYNGL 544

Query: 582 VDLLSKDKKYRECLNQFRHLL 602
           +  LS+ +++ E    F  ++
Sbjct: 545 LSGLSRLQRWDEATQVFEAMV 565



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 206/372 (55%), Gaps = 8/372 (2%)

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFV 240
           C PN  T+  LI G     +  +A++L EEM  N F    + + V + +++ GLC  G V
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGF----EGNAVVHTTLMKGLCDAGRV 60

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A E    M  ++  P+V+TY +L+   C    + EA+ +  EM+  G  PD VTF+ +
Sbjct: 61  VEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC-LVGRISRARELFVSMVSKG 359
           I+  CK G  ++  R+LE +IQRG+      + +++   C     +  A ++   +++KG
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
               V  +N++IN  CK + ++ A  L   M+ +   P+V T+  L++GL +   +G+A 
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 239

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +L++KM      P+  T++T I+GLCK G V +A ++FQ +    C   + T+N LI+GL
Sbjct: 240 QLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGL 299

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM-EAKNCVPS 538
           CK  R++ A +L+HR++  G  PD++T +++I  LCK  Q+D+A  L   + E+     +
Sbjct: 300 CKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 359

Query: 539 EVTFCTLLRGFV 550
            VT+ TL  G+ 
Sbjct: 360 AVTYSTLFHGYA 371



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 215/447 (48%), Gaps = 5/447 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A    + MI+    P + +FTIL+T L K  +      L +++ + G  P++   + +
Sbjct: 201 DSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTV 260

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LCK G    A+ +   + R    PN VT N LI+GLC   RI EA +L+ ++    C
Sbjct: 261 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGC 320

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+++T+N+LI+GLC++     A +LF + + E G +   + VTY+++  G    G +  
Sbjct: 321 APDIITYNSLIDGLCKSFQVDEAFQLF-QTIPESG-VSAANAVTYSTLFHGYAALGRMAD 378

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +   + D+  +P++ TY SLI  +C      E   L  EM   G  P V T +A++ 
Sbjct: 379 ACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLG 438

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              +    ++  +L + M  RG   D + YN +++G     + ++A  +   ++ K  R 
Sbjct: 439 GLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRK 498

Query: 363 ---DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
                 + + L+ + C+  + +DA  L  +M       +V +YN LLSGL ++    +A 
Sbjct: 499 FNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEAT 558

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           ++ + M      P+  T    I  LC    V +A ++ Q +    C   IET N LI G 
Sbjct: 559 QVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGY 618

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVT 506
           CK GR   A KL   +   G  P+  T
Sbjct: 619 CKSGRADLARKLLEEMTEAGLEPNDTT 645



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 178/335 (53%), Gaps = 2/335 (0%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           IC P+  TY  +I G    G +D A +LL +MK      N + + +L+ G C      EA
Sbjct: 4   ICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEA 63

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
              F  M  +   PDV+T+ A+++  CK GK D+   +L  MI RG  PDTVT+++L+DG
Sbjct: 64  LEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDG 122

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC-KDQKVEDAVCLYREMLSERIRP 397
            C  G   +A  +   ++ +G  +   ++  +I   C K   VE A  +   ++++   P
Sbjct: 123 LCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +V+ +N +++G  +  +L  A KL++ M     VP+ FTF   I GLCK   V EA Q+ 
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 242

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +    C   + TY+ +INGLCK G++  A +LF  ++ +   P+VVT + +I  LCK 
Sbjct: 243 EKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKA 302

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            ++++A  L   M    C P  +T+ +L+ G  ++
Sbjct: 303 KRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKS 337



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 172/391 (43%), Gaps = 38/391 (9%)

Query: 51  LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +N   K G +  ++A   F  M +    P + +  IL+  L K K+ +    L+ R+   
Sbjct: 261 INGLCKQGQV--DDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRET 318

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP-NTVTFNFLINGLCAEGRIME 169
           G  PD+   N LI+ LCK      AF +   I  S  +  N VT++ L +G  A GR+ +
Sbjct: 319 GCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMAD 378

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL--------VALKLFEEMVNEFGAI-- 219
           A R+F  L      P++ T+ +LI   C+T   +        +A K F   VN   A+  
Sbjct: 379 ACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLG 438

Query: 220 ----------------------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQM---KDRN 254
                                 C  D + YN +++G+ +    +KA  +L Q+   +DR 
Sbjct: 439 GLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRK 498

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
            NP+    ++L+   C V    +AK L  +M + G    V ++N +++   +  + D+  
Sbjct: 499 FNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEAT 558

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           ++ E M+  G  P+  T N ++   C   ++  A EL   M   GC  D+ + N LI   
Sbjct: 559 QVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGY 618

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
           CK  + + A  L  EM    + P+  T++ L
Sbjct: 619 CKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 7/213 (3%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL---NSNGLFP 114
           GN T   A+  FD M     +     + +++  +A+  +++  +++ +++         P
Sbjct: 443 GNHT-ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNP 501

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
               ++ L+  LC++G T  A  +L ++    F     ++N L++GL    R  EA ++F
Sbjct: 502 SSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVF 561

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           + +      P + T N +I+ LC       A +L + M ++ G  C PD+ T N++I G 
Sbjct: 562 EAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRM-SKLG--CCPDIETCNTLIGGY 618

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           CK G  D A++LL +M +  + PN  T++ L C
Sbjct: 619 CKSGRADLARKLLEEMTEAGLEPNDTTHDLLEC 651


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 159/514 (30%), Positives = 275/514 (53%), Gaps = 16/514 (3%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           FKD T + K L+   K+GN   NE++YF   ++     P +   T L+  L  +K  D  
Sbjct: 55  FKD-THLLKSLSRSCKAGNF--NESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKA 111

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           + +   L ++G  PDL   N +I   C+      A+ VL R+    F+P+ VT+N LI  
Sbjct: 112 IQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGS 170

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
           LC+ G +  A     +L    C P VVT+  LI           A+KL +EM+       
Sbjct: 171 LCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLE---INL 227

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           +PD+ TYNSII G+C++G+VD+A +++  +  +   P+VITYN L+ G      W+    
Sbjct: 228 QPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYE 287

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L  +M+  G + +VVT++ +I+  C+DGK+++   LL+ M ++G+ PD   Y+ L+   C
Sbjct: 288 LMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALC 347

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GR+  A E+   M+S GC  D+ +YN ++   CK ++ ++A+ ++ ++      P+  
Sbjct: 348 KEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNAS 407

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF--Q 458
           +YN++ S L+  G+   AL +I +M    V PD  T+ + I  LC++G V EA+++    
Sbjct: 408 SYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDM 467

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            + + +C+  + +YN ++ GLCK+ R+  A ++   +  KG  P+  T + +I  +   G
Sbjct: 468 EMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGG 527

Query: 519 QMDKANDL---LLDMEAKNCVPSEVTFCTLLRGF 549
            ++ A DL   L++M+A     SE +F  L + F
Sbjct: 528 CLNDARDLATTLVNMDAI----SEHSFERLYKTF 557



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 231/441 (52%), Gaps = 6/441 (1%)

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           CK G  + +   L  ++     P+ V    LI+GL     I +A ++   L      P++
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           + +N +I G CR      A ++ + M N+  +   PD+VTYN +I  LC  G +D A E 
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFS---PDIVTYNILIGSLCSRGMLDSALEF 183

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
             Q+   N  P V+TY  LI          EA  L  EM++  +QPD+ T+N++I   C+
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G +D+  +++  +  +G  PD +TYN L+ G    G+     EL   MV++GC  +V +
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y++LI++ C+D KVE+ V L ++M  + ++P    Y+ L++ L + G +  A++++D M 
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            +  VPD   + T +  LCK     EA+ +F+ +    C     +YN + + L   G   
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD--MEAKNCVPSEVTFCT 544
            A  +   +  KG  PD +T +++I  LC++G +D+A +LL+D  ME+  C PS V++  
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 545 LLRGFVQNNKKSKVVVLLHKM 565
           +L G  + ++ S  + +L  M
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAM 504



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 172/332 (51%), Gaps = 2/332 (0%)

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C   ++ E+      +++ G +PDVV    +I+       +DK  +++ ++   G +PD 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           + YN+++ GFC   RI  A ++   M +KG   D+ +YNILI + C    ++ A+    +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           +L E  +P+V+TY  L+      G + +A+KL+D+M   ++ PD FT+ + I G+C+ G+
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           V  A Q+  +I +      + TYN L+ GL   G+ +   +L   +  +G   +VVT S 
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I  +C++G++++   LL DM+ K   P    +  L+    +  +    + +L  M ++ 
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             V D+   + ++  L K K+  E L+ F  L
Sbjct: 367 -CVPDIVNYNTILACLCKQKRADEALSIFEKL 397



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 165/332 (49%), Gaps = 1/332 (0%)

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK G  +++   L  + ++   P+V+    LI G        +A    + +++N   PD+
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKA-IQVMHILENHGHPDL 126

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           + +NA+I   C+  ++D   ++L+ M  +G +PD VTYN L+   C  G +  A E    
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           ++ + C+  V +Y ILI A      +++A+ L  EML   ++P + TYN+++ G+ + G 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A ++I  +      PD  T+   + GL   G      ++   +    CE  + TY+ 
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI+ +C+ G+++    L   ++ KG  PD      +I  LCKEG++D A ++L  M +  
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
           CVP  V + T+L    +  +  + + +  K+ 
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKLG 398


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/534 (29%), Positives = 279/534 (52%), Gaps = 6/534 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G   + + +  F+ M++ +  P + +   +L +L         + +++ +   G+ P + 
Sbjct: 179 GGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVT 238

Query: 118 VLNLLINCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
             N +++  CK G    A  ++ ++  R C+ P+ VTFN LINGL  +G + +A  L ++
Sbjct: 239 TYNTMLHSFCKGGEVQRALDLVPKMQERGCY-PSEVTFNVLINGLSKKGELQQAKGLIQE 297

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +       +  T+N LI G C+    + AL L+EEMV        P V ++N+I+ G CK
Sbjct: 298 MAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG---VSPTVASHNTIMYGFCK 354

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +G +  A++ L  M  +N+ P++I+YN+LI GFC + +  EA  L  E+    +  ++VT
Sbjct: 355 EGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVT 414

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I+  C+ G ++   +L E MI RG++PD VTY  L++G C +G +  A+E F  M+
Sbjct: 415 YNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEML 474

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G   D ++Y   I    K      A  L  EML++   P VITYN  ++GL ++GNL 
Sbjct: 475 HVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLE 534

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +L+ KM  +  VPD  T+ +++    +NG + E  ++F  + +      + TY  LI
Sbjct: 535 EAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLI 594

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +     GRL  A   F  +Q KG +P+V+T + +I+  CK  +MD+A    ++M+ K   
Sbjct: 595 HAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIF 654

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           P++ T+  L+       K  + + L  +M  ++ +  D      ++  L KD K
Sbjct: 655 PNKYTYTILINENCNMGKWQEALRLYAQMLGKR-IRPDSCTHGALLKKLDKDYK 707



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 5/264 (1%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FFD M+ +  +P   ++T  +    K         L + + + G  PD+   N+ +N LC
Sbjct: 469 FFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLC 528

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K+G    A  +L +++R    P+ VT+   ++     G + E   +F  +      P VV
Sbjct: 529 KLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVV 588

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+  LI+          A+  F EM  E G +  P+V+TYN +I+G CK   +D+A +  
Sbjct: 589 TYTVLIHAHALNGRLDWAMAYFLEM-QEKGVV--PNVITYNVLINGFCKVRKMDQACKFF 645

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
           ++M+++ I PN  TY  LI   C +  W+EA  L+ +M+   ++PD  T  A++    KD
Sbjct: 646 IEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKD 705

Query: 308 GKMDKVNRLLELMI--QRGVNPDT 329
            K+  V  +  L++   R ++ +T
Sbjct: 706 YKVQAVQFIESLILDGDRTIDANT 729


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 257/498 (51%), Gaps = 7/498 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+K   +P   SF IL+   A+ ++ D  V+ F+ +      PDL    +L++CLCK G+
Sbjct: 145 MLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGM 204

Query: 132 TSGAFVVLGRILRSCFT-PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
              AF V   ++   F  P+      ++  L    R+ EA  +F ++      P+ + +N
Sbjct: 205 DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYN 264

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           T+I+GL +  +   ALK+ + M+ +    C P  VTY  +++ LCK G +++A+EL   M
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAK---ACVPTEVTYGILVNSLCKAGTLERAEELFRVM 321

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
                 PN + Y SLI GF      KEA  LF EM++ G +PDV+T   MI+  CK G  
Sbjct: 322 AASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF 381

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           ++  +  E M++ G  P+ VTY +++ G   +GR++ A  +   M++ GC  D  +Y  L
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICL 441

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL-KLIDKMQLND 429
           ++  CK  ++++A  L  E+      P++  Y++L++GL   G++   L  L ++ +   
Sbjct: 442 LDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAA 501

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM--GRLKT 487
              D     + I GLCK G + EA ++FQ + +  C+    TYN LINGLC+    R++ 
Sbjct: 502 ETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVER 561

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  L H L+  G +PD VT + +   LCK G++D+A  +L +  ++      V +  L  
Sbjct: 562 AFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCT 621

Query: 548 GFVQNNKKSKVVVLLHKM 565
           G     +  + V L  +M
Sbjct: 622 GLCYQGQVDRAVSLFQEM 639



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 271/562 (48%), Gaps = 46/562 (8%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    ++   K+G+  + EA+   D M+     P   ++ IL+  L K    +    
Sbjct: 259 DAIAYNTMIDGLAKAGH--AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF+ + ++G  P+  +   LI+   K G    A  +   ++ + + P+ +T   +I+GLC
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G   +AA+ F+++    C PNVVT+ T+I GL +      A ++ + M+      C P
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG---CFP 433

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC-------CVDD- 274
           D VTY  ++DG CK G +D+A +LL ++   + +PN+  Y+SL+ G C        +DD 
Sbjct: 434 DSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDL 493

Query: 275 ----------------------------WKEAKCLFIEMMDNGVQPDVVTFNAMINYNC- 305
                                         EA  +F  M+  G +PD  T+N +IN  C 
Sbjct: 494 FEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCR 553

Query: 306 -KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            ++ ++++   LL  + + G  PD VTY  L  G C +G + RA ++     S+G   DV
Sbjct: 554 SRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADV 613

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y  L    C   +V+ AV L++EM+ +   P    Y  +++GL +V  L DA K  D+
Sbjct: 614 VAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDE 673

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL--RIETYNCLINGLCKM 482
           M      P   T+   +  LC  G V EA   F+++   + EL   +  Y+ LI+G CK 
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESML-ARGELVGSVMIYDALIHGFCKA 732

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            ++  A KLF  +  +G +P  VT +++   L + G+ +KA +LL +M A    P   TF
Sbjct: 733 LKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATF 792

Query: 543 CTLLRGFVQNNKKSKVVVLLHK 564
             +L G  ++++  K++ L+ +
Sbjct: 793 TAILDGLRKSDESGKLLKLVQE 814



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 164/546 (30%), Positives = 252/546 (46%), Gaps = 46/546 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F  M K    P   ++  ++  LAK       + +   + +    P      +L
Sbjct: 242 KEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGIL 301

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G    A  +   +  S F PN+V +  LI+G    GR+ EA  LF ++     
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V+T   +I+GLC++ N   A K FEEM+      CKP+VVTY +II GL K G V  
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR---GGCKPNVVTYTTIIQGLSKIGRVAN 418

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  ++  M      P+ +TY  L+ GFC +    EA  L  E+      P++  +++++N
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVN 478

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYN---SLMDGFCLVGRISRARELFVSMVSKG 359
             C  G ++K   L +L  Q     +T+      S++ G C  GR+  A  +F  MVS+G
Sbjct: 479 GLCDGGSVEKT--LDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536

Query: 360 CRHDVYSYNILINANC--KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           C+ D  +YNILIN  C  ++ +VE A  L  ++      P  +TY  L  GL ++G +  
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDR 596

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A+K++++        D   +     GLC  G V  AV +FQ +           Y C+IN
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA-------------- 523
           GL K+ +L+ ACK F  +  KG  P V T + ++  LC  G +D+A              
Sbjct: 657 GLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELV 716

Query: 524 -----NDLLL-----------------DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
                 D L+                 DM ++  VP+ VT  +L  G V++ K  K   L
Sbjct: 717 GSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQEL 776

Query: 562 LHKMAA 567
           L +MAA
Sbjct: 777 LQEMAA 782



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 240/495 (48%), Gaps = 6/495 (1%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP-DLFVLNLLINCLCKMGITS 133
           + P  G    + +  +L   K   T +S F+       F  D+F  N L+N L      S
Sbjct: 77  LGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYS 136

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
             + +   +L++   PNT +FN LI       R  +A   F+ +    C P++ TF  L+
Sbjct: 137 QCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILV 196

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           + LC+      A ++F EM+        PD   + +++  L K   V +A+E+  QM+  
Sbjct: 197 DCLCKAGMDEKAFEVFHEMMAM--GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKC 254

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
              P+ I YN++I G       +EA  +   M+     P  VT+  ++N  CK G +++ 
Sbjct: 255 GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERA 314

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L  +M   G  P++V Y SL+ GF   GR+  A  LF  MV  G R DV ++ ++I+ 
Sbjct: 315 EELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDG 374

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK    E A   + EM+    +P+V+TY T++ GL ++G + +A +++  M  +   PD
Sbjct: 375 LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPD 434

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL-KTACKLF 492
           S T+   +DG CK G + EA Q+   +  C     ++ Y+ L+NGLC  G + KT   LF
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLF 494

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            + +      D   C ++I  LCK G++D+A  +   M ++ C P   T+  L+ G  ++
Sbjct: 495 EQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRS 554

Query: 553 --NKKSKVVVLLHKM 565
             N+  +   LLH +
Sbjct: 555 RENRVERAFALLHDL 569



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 210/463 (45%), Gaps = 45/463 (9%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           ++ F  +  T+N L+N L AE    +   + +++      PN  +FN LI    RTR   
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A+  FE M  +    CKPD+ T+  ++D LCK G  +KA E+                 
Sbjct: 172 DAVTCFEIMKRKR---CKPDLHTFLILVDCLCKAGMDEKAFEV----------------- 211

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
                             F EMM  G V PD     AM+    K  ++ +   +   M +
Sbjct: 212 ------------------FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEK 253

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G  PD + YN+++DG    G    A ++  +M++K C     +Y IL+N+ CK   +E 
Sbjct: 254 CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLER 313

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+R M +   RP+ + Y +L+ G  + G + +A  L D+M      PD  T    ID
Sbjct: 314 AEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK+G   +A + F+ +    C+  + TY  +I GL K+GR+  A ++   +   G  P
Sbjct: 374 GLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFP 433

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D VT   ++   CK G++D+A  LL +++  +  P+   + +L+ G        K +  L
Sbjct: 434 DSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDL 493

Query: 563 ---HKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
               K AAE L   D  L   ++  L K  +  E    F+ ++
Sbjct: 494 FEQSKAAAETL---DPGLCCSIIVGLCKTGRLDEACRIFQRMV 533


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 159/493 (32%), Positives = 251/493 (50%), Gaps = 9/493 (1%)

Query: 78  SPGMTSFTI--LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
           S G  SF    L+  L +++ ++   S ++++     F +   L+ L+ C  +M  T  A
Sbjct: 67  SGGSLSFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFA 126

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             VL  +L+  F  N   +N L+ GLC      +A  L +++   +  P+VV++NT+I G
Sbjct: 127 HGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRG 186

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            C  +    AL+L  EM    G+ C   +VT+  +ID  CK G +D+A  LL +MK + +
Sbjct: 187 FCEGKELEKALQLANEMQ---GSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGL 243

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
             ++I Y SLI GFC   +    K LF E+++ G  P  +T+N +I   CK G++ + + 
Sbjct: 244 EADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASE 303

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           + E M++RGV P+  TY  L+DG C VG+   A +L   M+ K    +V +YNI+IN  C
Sbjct: 304 IFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLC 363

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND---VVP 432
           KD  V DA+ +   M   R RP  ITYN+LL GL   G+L +A KL+  + L D     P
Sbjct: 364 KDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLL-YLMLKDSSYTDP 422

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D  +F   I GLCK   + +A+ ++  +        I T N L+N   K G +  A +L+
Sbjct: 423 DVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELW 482

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            ++ +   +P+  T +TMI   CK G ++ A  LL  M      PS   +  LL    + 
Sbjct: 483 KQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKK 542

Query: 553 NKKSKVVVLLHKM 565
               +   L  +M
Sbjct: 543 GTLDQAWRLFEEM 555



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 246/494 (49%), Gaps = 5/494 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           S  + ++ IL+    K  + D  + L K +   GL  DL V   LI   C  G       
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKA 268

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   +L    +P  +T+N LI G C  GR+ EA+ +F+ +      PNV T+  LI+GLC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLC 328

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
               T  AL+L   M+ +     +P+VVTYN II+ LCKD  V  A E++  MK R   P
Sbjct: 329 GVGKTKEALQLLNLMLQKDE---EPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRP 385

Query: 258 NVITYNSLICGFCCVDDWKEA-KCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNR 315
           + ITYNSL+ G C   D  EA K L++ + D+    PDV++FNA+I+  CK  ++ +   
Sbjct: 386 DNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALD 445

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           + +L++++    D VT N L++     G +++A EL+  + +     +  +Y  +I+  C
Sbjct: 446 IYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFC 505

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K   +  A  L  +M    + PSV  YN LLS L + G L  A +L ++MQ +D  PD  
Sbjct: 506 KTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVI 565

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           +F   IDG  K G +  A  +   + +      + TY+ LIN   K+G L  A   F ++
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G  PD   C +++ +   +G+ DK  + +  +  K+ V  +   CT++     ++  
Sbjct: 626 IDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGN 685

Query: 556 SKVVVLLHKMAAEK 569
             +   L ++A +K
Sbjct: 686 MDIAKRLLRVADDK 699



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 252/535 (47%), Gaps = 34/535 (6%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A  F+  M++        S + LL    + ++      +   +   G   +++  N+L+ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLK 150

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LC+      A  +L  + ++   P+ V++N +I G C    + +A +L  ++    C  
Sbjct: 151 GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSW 210

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNE----------------------------F 216
           ++VT+  LI+  C+      A+ L +EM ++                            F
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270

Query: 217 GAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
             + +    P  +TYN++I G CK G + +A E+   M +R + PNV TY  LI G C V
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGV 330

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
              KEA  L   M+    +P+VVT+N +IN  CKD  +     ++ELM +R   PD +TY
Sbjct: 331 GKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITY 390

Query: 333 NSLMDGFCLVGRISRARELFVSMV--SKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           NSL+ G C  G +  A +L   M+  S     DV S+N LI+  CK  ++  A+ +Y  +
Sbjct: 391 NSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLL 450

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           + +     ++T N LL+   + G++  A++L  ++  + +VP+S T+ T IDG CK G +
Sbjct: 451 VEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGML 510

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             A  +   +R  +    +  YNCL++ LCK G L  A +LF  +Q     PDV++ + M
Sbjct: 511 NVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIM 570

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           I    K G +  A  LL+ M      P   T+  L+  F++     + +    KM
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 263/530 (49%), Gaps = 8/530 (1%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N+   +AV     M +    P + S+  ++    + K+ +  + L   +  +G    L  
Sbjct: 155 NLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVT 214

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
             +LI+  CK G    A  +L  +       + + +  LI G C  G +     LF ++ 
Sbjct: 215 WGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVL 274

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                P  +T+NTLI G C+      A ++FE M+ E G   +P+V TY  +IDGLC  G
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMM-ERGV--RPNVYTYTGLIDGLCGVG 331

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTF 297
              +A +LL  M  ++  PNV+TYN +I    C D         +E+M     +PD +T+
Sbjct: 332 KTKEALQLLNLMLQKDEEPNVVTYN-IIINKLCKDSLVADALEIVELMKKRRTRPDNITY 390

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRG--VNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           N+++   C  G +D+ ++LL LM++     +PD +++N+L+ G C   R+ +A +++  +
Sbjct: 391 NSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLL 450

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V K    D+ + NIL+N+  K   V  A+ L++++ + +I P+  TY T++ G  + G L
Sbjct: 451 VEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGML 510

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             A  L+ KM+L+++ P  F +   +  LCK G + +A ++F+ ++       + ++N +
Sbjct: 511 NVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIM 570

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+G  K G +K+A  L   + H G  PD+ T S +I+   K G +D+A      M     
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGF 630

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
            P      ++L+  +   +  K+   + K+  +K VV D  L+  V+D +
Sbjct: 631 EPDAHICDSVLKYCISQGETDKLTEFVKKL-VDKDVVLDKELTCTVMDYM 679



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 206/389 (52%), Gaps = 5/389 (1%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N V+ + L+    + R T  A  +   M+    A    +V  YN ++ GLC++    KA 
Sbjct: 106 NFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAF---NVYNYNILLKGLCRNLEFGKAV 162

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            LL +M+  ++ P+V++YN++I GFC   + ++A  L  EM  +G    +VT+  +I+  
Sbjct: 163 SLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAF 222

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK GKMD+   LL+ M  +G+  D + Y SL+ GFC  G + R + LF  ++ +G     
Sbjct: 223 CKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN LI   CK  ++++A  ++  M+   +RP+V TY  L+ GL  VG   +AL+L++ 
Sbjct: 283 ITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M   D  P+  T+   I+ LCK+  V +A+++ + ++  +      TYN L+ GLC  G 
Sbjct: 343 MLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGD 402

Query: 485 LKTACKLFHRLQHKGPI--PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           L  A KL + +        PDV++ + +IH LCK  ++ +A D+   +  K      VT 
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTT 462

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             LL   +++   +K + L  +++  K+V
Sbjct: 463 NILLNSTLKSGDVNKAMELWKQISNSKIV 491



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 21/296 (7%)

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           +L LM++RG   +   YN L+ G C      +A  L   M       DV SYN +I   C
Sbjct: 129 VLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFC 188

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           + +++E A+ L  EM       S++T+  L+    + G + +A+ L+ +M+   +  D  
Sbjct: 189 EGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLI 248

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAI---RNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
            + + I G C  G +     +F  +    +  C +   TYN LI G CK+GRLK A ++F
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI---TYNTLIRGFCKLGRLKEASEIF 305

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +  +G  P+V T + +I  LC  G+  +A  LL  M  K+  P+ VT+  ++    ++
Sbjct: 306 EFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKD 365

Query: 553 NKKSKVVVLLHKMAAEKL---------------VVSDLSLSSKVVDLLSKDKKYRE 593
           +  +  + ++  M   +                   DL  +SK++ L+ KD  Y +
Sbjct: 366 SLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTD 421



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 130/278 (46%), Gaps = 38/278 (13%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  +D +++   +  + +  ILL    K+   +  + L+K+++++ + P+      +
Sbjct: 441 HQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTM 500

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK G+ + A  +L ++  S   P+   +N L++ LC +G + +A RLF+++     
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDS 560

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V++FN +I+G  +  +   A  L   M +   A   PD+ TY+ +I+   K G++D 
Sbjct: 561 FPDVISFNIMIDGSLKAGDIKSAESLLVGMSH---AGLSPDLFTYSKLINRFLKLGYLD- 616

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
                                             EA   F +M+D+G +PD    ++++ 
Sbjct: 617 ----------------------------------EAISFFDKMIDSGFEPDAHICDSVLK 642

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           Y    G+ DK+   ++ ++ + V  D     ++MD  C
Sbjct: 643 YCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMC 680


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 266/500 (53%), Gaps = 5/500 (1%)

Query: 68  FFDCMIKMKP--SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           FFD +   +    PG   F  L  +L      +     F ++N   + P +   N L++ 
Sbjct: 166 FFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHR 225

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           L K      A      ++ +  +P+  T+N +I  L  EG +  A  LF+++      P+
Sbjct: 226 LSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPD 285

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           +VT+N+LI+G  +      A+ +FEEM +   A C+PDV+TYNS+I+  CK   + +A E
Sbjct: 286 IVTYNSLIDGYGKVGMLTGAVSVFEEMKD---AGCEPDVITYNSLINCFCKFERIPQAFE 342

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
            L  MK R + PNV+TY++LI  FC      EA   F++M+  G+QP+  T+ ++I+ NC
Sbjct: 343 YLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANC 402

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           K G +++  +L   M Q GVN + VTY +L+DG C  GR+  A ELF +++  G   +  
Sbjct: 403 KIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQ 462

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            Y  L +   K + +E A+ +  EM  + ++P ++ Y T + GL +   + D++ +I +M
Sbjct: 463 IYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREM 522

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
               +  +S+ + T ID   K G   EAV + Q +++   ++ + TY  LI+GLCK+G +
Sbjct: 523 MDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLV 582

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A + F  +   G  P+++  + +I  LCK   +++A +L  +M  K   P ++ + +L
Sbjct: 583 QQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSL 642

Query: 546 LRGFVQNNKKSKVVVLLHKM 565
           + G +++    + + L ++M
Sbjct: 643 IDGNMKHGNPGEALSLRNRM 662



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 154/551 (27%), Positives = 256/551 (46%), Gaps = 38/551 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F  M K +  P + S   LL  L+K+ +    +S FK +   GL P +F  N++
Sbjct: 198 EEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMV 257

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I CL + G    A  +   +      P+ VT+N LI+G    G +  A  +F+++    C
Sbjct: 258 IGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGC 317

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+V+T+N+LIN  C+      A +    M        +P+VVTY+++ID  CK G + +
Sbjct: 318 EPDVITYNSLINCFCKFERIPQAFEYLHGMKQRG---LQPNVVTYSTLIDAFCKAGMLLE 374

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +  + M    + PN  TY SLI   C + D  EA  L  EM   GV  ++VT+ A+++
Sbjct: 375 ANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLD 434

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+DG+M +   L   +++ G   +   Y SL  G+     + +A ++   M  K  + 
Sbjct: 435 GLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKP 494

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  Y   I   C+  ++ED++ + REM+   +  +   Y TL+   F+VG   +A+ L+
Sbjct: 495 DLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLL 554

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +MQ   +     T+   IDGLCK G V +AV+ F  +     +  I  Y  LI+GLCK 
Sbjct: 555 QEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKN 614

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIH------------------------------ 512
             L+ A  LF+ +  KG  PD +  +++I                               
Sbjct: 615 DCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAY 674

Query: 513 ----W-LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
               W   + GQ+  A  LL +M  K  +P +V    LLR + +    ++ + L   MA 
Sbjct: 675 TSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMAR 734

Query: 568 EKLVVSDLSLS 578
             L+   + ++
Sbjct: 735 RGLISGTIDIT 745



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 159/333 (47%), Gaps = 1/333 (0%)

Query: 253 RNI-NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           RN+  P    +++L      +   +EA+  F +M    V P V + N +++   K  K  
Sbjct: 174 RNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGG 233

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
                 + M+  G++P   TYN ++      G +  AR LF  M +KG R D+ +YN LI
Sbjct: 234 LALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLI 293

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +   K   +  AV ++ EM      P VITYN+L++   +   +  A + +  M+   + 
Sbjct: 294 DGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQ 353

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  T++T ID  CK G +LEA + F  +     +    TY  LI+  CK+G L  A KL
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              +Q  G   ++VT + ++  LC++G+M +A +L   +       ++  + +L  G+++
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
                K + +L +M  + L    L   +K+  L
Sbjct: 474 AKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGL 506



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 3/199 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + EAV     M  +     + ++ +L+  L K       V  F  +  NGL P++ +   
Sbjct: 547 TTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTA 606

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+ LCK      A  +   +L    +P+ + +  LI+G    G   EA  L  ++    
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            + ++  + +LI G  R     +A  L +EM+ + G I  PD V    ++    + G ++
Sbjct: 667 MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRK-GII--PDQVLCICLLRKYYELGDIN 723

Query: 242 KAKELLLQMKDRNINPNVI 260
           +A  L   M  R +    I
Sbjct: 724 EALALHDDMARRGLISGTI 742


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 155/516 (30%), Positives = 271/516 (52%), Gaps = 5/516 (0%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +   +A+  F  M K+  SP + ++  L+  L K+   D      +++  +G+   
Sbjct: 325 KGGKV--EDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 382

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           L   ++LIN L K+   + A  VL   L   FTPN V +N LI+G C  G + +A R+  
Sbjct: 383 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 442

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +     +PN VT N++I G C+      A  + EEM++  G    P   T  +II  LC
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR-GFSINPGAFT--TIIHWLC 499

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            +   + A   L +M  RN+ PN     +L+ G C      +A  L+  +++ G   ++V
Sbjct: 500 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 559

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T NA+I+  CK G M +  RLL+ M++RG   D +TYN+L+ G C  G++    +L   M
Sbjct: 560 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 619

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V +G   D ++YN+LI+  C+  K+++AV L+ E  S  + P+V TY  ++ G  +   +
Sbjct: 620 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 679

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +  KL  ++   ++  +S  + T I   C+NG  +EA ++   +R+        TY+ L
Sbjct: 680 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 739

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+G+C +GR++ A  L   ++ +G +P+VV  + +I   CK GQMDK  ++L +M + + 
Sbjct: 740 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 799

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            P+++T+  ++ G+ ++        LLH+M  + +V
Sbjct: 800 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIV 835



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 157/544 (28%), Positives = 266/544 (48%), Gaps = 39/544 (7%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N+    A+  F  +      P + + T LL+ L K  + +    +F+ +   G+ PD+++
Sbjct: 257 NVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYL 315

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            +  IN  CK G    A  +   + +   +PN VT+N LI+GLC  G + EA R  +K+ 
Sbjct: 316 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV 375

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +  ++T++ LINGL +      A  + +E + +      P+ V YN++IDG CK G
Sbjct: 376 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG---FTPNEVVYNTLIDGYCKMG 432

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +  A  +   M  + INPN +T NS+I GFC +   ++A+C+  EM+  G   +   F 
Sbjct: 433 NLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT 492

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDT----------------------------- 329
            +I++ C + + +   R L  M+ R + P+                              
Sbjct: 493 TIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 552

Query: 330 ------VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
                 VT N+L+ G C  G +  A  L   M+ +G   D  +YN LI+  CK+ KVE+ 
Sbjct: 553 GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEG 612

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EM+ + I P   TYN L+ G+ ++G L +A+ L ++ +  D+VP+ +T+   IDG
Sbjct: 613 FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 672

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK   + E  ++F  +     EL    YN LI   C+ G    A KL   ++ KG  P 
Sbjct: 673 YCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT 732

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
             T S++IH +C  G+M+ A  L+ +M  +  +P+ V +  L+ G+ +  +  KVV +L 
Sbjct: 733 TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 792

Query: 564 KMAA 567
           +M++
Sbjct: 793 EMSS 796



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 258/499 (51%), Gaps = 5/499 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+  +EA  F + M+K   +  + ++++L+  L K ++++   S+ K     G  P+
Sbjct: 360 KHGNL--DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPN 417

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             V N LI+  CKMG    A  + G ++     PN+VT N +I G C  G++ +A  + +
Sbjct: 418 EVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILE 477

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++       N   F T+I+ LC       AL+   EM+       +P+     +++ GLC
Sbjct: 478 EMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN---MRPNDGLLTTLVGGLC 534

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G    A EL  ++ ++    N++T N+LI G C   + +EA  L  +M++ G   D +
Sbjct: 535 KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKI 594

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I+  CK+GK+++  +L   M+++G+ PDT TYN L+ G C +G++  A  L+   
Sbjct: 595 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 654

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            S+    +VY+Y ++I+  CK  K+E+   L+ E+L++ +  + + YNTL+    + GN 
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 714

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A KL D M+   + P + T+++ I G+C  G + +A  +   +R       +  Y  L
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 774

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I G CK+G++     +   +      P+ +T + MI    K G M  A  LL +M  K  
Sbjct: 775 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGI 834

Query: 536 VPSEVTFCTLLRGFVQNNK 554
           VP  VT+  L  GF +  K
Sbjct: 835 VPDTVTYNVLTNGFCKEGK 853



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 235/437 (53%), Gaps = 9/437 (2%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P   T  FL++ L     + ++  +F+ +      P+V  F+T IN  C+      A++L
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQL 335

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F +M  + G    P+VVTYN++I GLCK G +D+A     +M    +N  +ITY+ LI G
Sbjct: 336 FFDM-EKLGV--SPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLING 392

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
              ++ + EA  +  E ++ G  P+ V +N +I+  CK G +    R+   M+ +G+NP+
Sbjct: 393 LMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPN 452

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           +VT NS++ GFC +G++ +A  +   M+S+G   +  ++  +I+  C + + E A+   R
Sbjct: 453 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 512

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EML   +RP+     TL+ GL + G   DA++L  ++       +  T    I GLCK G
Sbjct: 513 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 572

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EAV++ + +      L   TYN LI+G CK G+++   KL   +  +G  PD  T +
Sbjct: 573 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 632

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +IH +C+ G++D+A +L  + ++++ VP+  T+  ++ G+ + +K  +   L       
Sbjct: 633 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLF-----T 687

Query: 569 KLVVSDLSLSSKVVDLL 585
           +L+  +L L+S V + L
Sbjct: 688 ELLTQNLELNSVVYNTL 704



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 223/451 (49%), Gaps = 8/451 (1%)

Query: 155 NFLINGLCAEGR---IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           + LI+  C + R      A  +F+ L      P V T   L++ L +      +  +FE 
Sbjct: 245 DLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFET 304

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M         PDV  +++ I+  CK G V+ A +L   M+   ++PNV+TYN+LI G C 
Sbjct: 305 MRQG----VSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCK 360

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
             +  EA     +M+ +GV   ++T++ +IN   K  K ++ N +L+  +++G  P+ V 
Sbjct: 361 HGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVV 420

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YN+L+DG+C +G +  A  +   MVSKG   +  + N +I   CK  ++E A C+  EML
Sbjct: 421 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 480

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
           S     +   + T++  L        AL+ + +M L ++ P+     T + GLCK G   
Sbjct: 481 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 540

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +AV+++  +        + T N LI+GLCK G ++ A +L  ++  +G + D +T +T+I
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
              CKEG++++   L  +M  +   P   T+  L+ G  +  K  + V L ++  +  L 
Sbjct: 601 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL- 659

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           V ++     ++D   K  K  E    F  LL
Sbjct: 660 VPNVYTYGVMIDGYCKADKIEEGEKLFTELL 690


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 150/452 (33%), Positives = 243/452 (53%), Gaps = 5/452 (1%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G  P L   N ++  L    + S A  +L  +LR    PN  T+N L+  LCA G+  EA
Sbjct: 115 GYAPSLLAYNAVLLALSDASLPS-ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 171 ARLF-KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
             +    +    C PNVVT+NTL+   CR      A +L   M  E G   +P +VT+N+
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVM-REGGV--RPSLVTFNT 230

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +++GLCK G ++ A+++  +M    + P+ ++YN+L+ G+C      EA  +F EM   G
Sbjct: 231 VVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG 290

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           V PDVVTF ++I+  C+ G +++   L+  M +RG+  +  T+ +L+DGFC  G +  A 
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL 350

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
                M     +  V  YN+LIN  CK  ++++A  L  EM ++ ++P V+TY+T+LSG 
Sbjct: 351 LAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            ++G+   A +L  KM    VVPD+ T+++ I GLC+   + +A ++F+ +     +   
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE 470

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY  LI+G CK G ++ A  L   +  KG +PDVVT S +I  L K  +  +A  LL  
Sbjct: 471 FTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFK 530

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           +  ++ VP  + +  L+        KS V +L
Sbjct: 531 LYYEDPVPDNIKYEALMHCCRTAEFKSVVALL 562



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 257/498 (51%), Gaps = 19/498 (3%)

Query: 72  MIKMKPSPGMTSFTILLTML-AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG 130
           M++   +P + ++ IL+  L A+ ++ + +  +   +   G  P++   N L+   C+ G
Sbjct: 145 MLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAG 204

Query: 131 ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
               A  ++G +      P+ VTFN ++NGLC  GR+ +A ++F ++      P+ V++N
Sbjct: 205 EVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYN 264

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           TL++G C+      AL +F EM  + G +  PDVVT+ S+I  +C+ G +++A  L+ QM
Sbjct: 265 TLVSGYCKAGCLHEALAVFAEMAQK-GVV--PDVVTFTSLIHAMCRAGNLERAVALVGQM 321

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
           ++R +  N  T+ +LI GFC      +A     EM +  +QP VV +N +IN  CK G+M
Sbjct: 322 RERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRM 381

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           D+   L+  M  +G+ PD VTY++++ G+C +G    A EL   M+ KG   D  +Y+ L
Sbjct: 382 DEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSL 441

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I   C+++++ DA  L+ +ML   ++P   TY TL+ G  + GN+  AL L D+M    V
Sbjct: 442 IRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGV 501

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQV---------------FQAIRNCKCELRIETYNCL 475
           +PD  T++  IDGL K+    EA ++               ++A+ +C      ++   L
Sbjct: 502 LPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVAL 561

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           + G    G +  A K++  +  +    D    S +IH  C+ G + KA      +     
Sbjct: 562 LKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGF 621

Query: 536 VPSEVTFCTLLRGFVQNN 553
            P+  +  +L+RG  +  
Sbjct: 622 SPNSTSTISLVRGLFEEG 639



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 119/345 (34%), Positives = 194/345 (56%), Gaps = 2/345 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA-KC 280
           P ++ YN+++  L  D  +  A+ LL  M    + PNV TYN L+   C     +EA   
Sbjct: 118 PSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +  +M   G  P+VVT+N ++   C+ G++D   RL+ +M + GV P  VT+N++++G C
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GR+  AR++F  M  +G   D  SYN L++  CK   + +A+ ++ EM  + + P V+
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T+ +L+  + + GNL  A+ L+ +M+   +  + FTF   IDG C+NGF+ +A+   + +
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           R C+ +  +  YN LING CK+GR+  A +L H ++ KG  PDVVT ST++   CK G  
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           D A +L   M  K  VP  +T+ +L+RG  +  +      L  KM
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKM 461



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 217/411 (52%), Gaps = 6/411 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+++ +N ++  L    +   A +L   M+ +  A   P+V TYN ++  LC  G  ++A
Sbjct: 118 PSLLAYNAVLLALSDA-SLPSARRLLASMLRDGVA---PNVYTYNILVRALCARGQREEA 173

Query: 244 KELLLQ-MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
             ++   M+     PNV+TYN+L+  FC   +   A+ L   M + GV+P +VTFN ++N
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+M+   ++ + M + G+ PD V+YN+L+ G+C  G +  A  +F  M  KG   
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV ++  LI+A C+   +E AV L  +M    +R +  T+  L+ G  + G L DAL  +
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M+   + P    +   I+G CK G + EA ++   +     +  + TY+ +++G CK+
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G   +A +L  ++  KG +PD +T S++I  LC+E ++  A +L   M      P E T+
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            TL+ G  +     K +  LH    +K V+ D+   S ++D LSK  + +E
Sbjct: 474 TTLIDGHCKEGNVQKALS-LHDEMIKKGVLPDVVTYSVLIDGLSKSARTKE 523



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 208/438 (47%), Gaps = 22/438 (5%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +   +A   FD M +   +P   S+  L++   K       +++F  +   G+ PD
Sbjct: 237 KAGRM--EDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI+ +C+ G    A  ++G++       N  TF  LI+G C  G + +A    K
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P+VV +N LING C+      A +L  EM  +     KPDVVTY++I+ G C
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG---MKPDVVTYSTILSGYC 411

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G  D A EL  +M  + + P+ ITY+SLI G C      +A  LF +M+  G+QPD  
Sbjct: 412 KIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEF 471

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+ +CK+G + K   L + MI++GV PD VTY+ L+DG     R   A+ L   +
Sbjct: 472 TYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCL----------------YREMLSERIRPSV 399
             +    D   Y  L++  C+  + +  V L                Y+ ML    +   
Sbjct: 532 YYEDPVPDNIKYEALMHC-CRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDG 590

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
             Y+ L+ G  + GN+  AL    ++      P+S +  + + GL + G  +EA  V Q 
Sbjct: 591 SVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQE 650

Query: 460 IRNCKCELRIETYNCLIN 477
           + NC      ET   LI+
Sbjct: 651 LLNCCSLADAETSKALID 668



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 225/453 (49%), Gaps = 28/453 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG S    ++   K+G +  +EA+  F  M +    P + +FT L+  + +    +  V+
Sbjct: 259 DGVSYNTLVSGYCKAGCL--HEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVA 316

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L  ++   GL  + F    LI+  C+ G    A + +  +      P+ V +N LING C
Sbjct: 317 LVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYC 376

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GR+ EA  L  ++      P+VVT++T+++G C+  +T  A +L  +M+ + G +  P
Sbjct: 377 KLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKK-GVV--P 433

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D +TY+S+I GLC++  +  A EL  +M    + P+  TY +LI G C   + ++A  L 
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLH 493

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD----- 337
            EM+  GV PDVVT++ +I+   K  +  +  RLL  +      PD + Y +LM      
Sbjct: 494 DEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTA 553

Query: 338 ----------GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
                     GF + G +++A +++ SM+ +  + D   Y++LI+ +C+   +  A+  +
Sbjct: 554 EFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFH 613

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           +++L     P+  +  +L+ GLF+ G   +A  +I ++     + D+ T    ID   K 
Sbjct: 614 KQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKE 673

Query: 448 GFVLEAVQVFQAIRNC---KCELRIETYNCLIN 477
           G     V  FQA       K  L +E +NC+++
Sbjct: 674 G-----VGYFQAQGELCMQKPALFVEHWNCMMS 701


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 277/532 (52%), Gaps = 14/532 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+    SP   +F +L+ +L  +   D    LF ++   G  P+ +   +L+   C+ G 
Sbjct: 47  MVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGF 106

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           TS    +LG + R  F+PN V +N LI+  C EG+  +A +L  ++      P+VVTFN 
Sbjct: 107 TSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNA 166

Query: 192 LINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
            I+ LC +   L A ++F +M ++E   + +P+++TYN ++ G CK+G +++A+ L  +M
Sbjct: 167 RISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKM 226

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
           K      N  +YN  + G   +    EA+ +  EM+D G++P+V ++N +++  CK+G +
Sbjct: 227 KVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVL 286

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
                L+ LM   GV PDTVTY +L+ G+C  G++S A  +   M+  GC  + Y+ NIL
Sbjct: 287 FDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNIL 346

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           + +  K+ ++ +A  L ++M  +      +T N ++ GL   G L  A+++++ M     
Sbjct: 347 LYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGM----- 401

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
               +T  +   G   N ++     V  +    KC   + +Y+ +I+GLCK GR+  A K
Sbjct: 402 ----WTHGSAALGNLGNSYI---GLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKK 454

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
            F  +  K   PD       IH  CKEG++  A  +L DME K C  +  T+ +L+ G  
Sbjct: 455 KFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLG 514

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             N+  ++  L+ +M  E+ V  D+S+ + V+  L +  + ++  +    +L
Sbjct: 515 SKNQIFEIYGLIDEM-RERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEML 565



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 262/533 (49%), Gaps = 40/533 (7%)

Query: 64  EAVYFFDCMIKMKPSPGM---TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           EA   F+   KMK S  +    S+ I L  L +  +      + K +   G+ P+++  N
Sbjct: 218 EARALFE---KMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYN 274

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           ++++ LCK G+   A +++  +  S   P+TVT+  L++G C  G++ EA  + +++   
Sbjct: 275 IVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRD 334

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            C PN  T N L+  L +      A +L ++M NE G +   D VT N +IDGLC +G +
Sbjct: 335 GCSPNNYTCNILLYSLWKEGRISEAEELLQKM-NEKGYVI--DTVTCNIVIDGLCNNGKL 391

Query: 241 DKAKELLLQM-----------------------KDRNINPNVITYNSLICGFCCVDDWKE 277
           DKA E++  M                         +   P++I+Y+++I G C      E
Sbjct: 392 DKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGE 451

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           AK  FIEMM   +QPD   ++  I+  CK+GK+    R+L+ M ++G N    TYNSL+ 
Sbjct: 452 AKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIM 511

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G     +I     L   M  +G   DV  YN ++++ C+  +V+DA  +  EML + I P
Sbjct: 512 GLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISP 571

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           ++ +++ L+    +  +   A+  I ++ LN        ++   + L   G V++A ++F
Sbjct: 572 NISSFSILIKAFCKACDF-SAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELF 630

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           +   +   ++    Y  LI+ LCK  +L  A  + H+L  KG   D  +   +I  L K 
Sbjct: 631 ETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKR 690

Query: 518 GQMDKANDL---LLDMEAKNCVPSEV---TFCTLLRGFVQNNKKSKVVVLLHK 564
           G   +A++L   +++M ++  V ++V     C+ ++G    + +S+   +LH+
Sbjct: 691 GNKHEADELAEKMMEMASEGKVKNKVHQNASCS-IQGKKNKDGESEWQTILHR 742



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 195/376 (51%), Gaps = 11/376 (2%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI---CGFCCVDDWKEA 278
           P +  YN ++    K+G VD    L   M    ++P   T+N LI   C   C+DD +E 
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE- 77

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             LF +M + G +P+  +F  ++   C+ G   K   LL  M + G +P+ V YN+L+  
Sbjct: 78  --LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISS 135

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI--- 395
           FC  G+   A +L   M   G   DV ++N  I+A C   KV +A  ++R+M  + +   
Sbjct: 136 FCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGL 195

Query: 396 -RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
            +P++ITYN +L G  + G L +A  L +KM++++ + +  ++  ++ GL + G +LEA 
Sbjct: 196 PQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQ 255

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            V + + +   E  + +YN +++GLCK G L  A  L   +   G +PD VT +T++H  
Sbjct: 256 LVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGY 315

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C  G++ +AN++L +M    C P+  T   LL    +  + S+   LL KM  EK  V D
Sbjct: 316 CHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM-NEKGYVID 374

Query: 575 LSLSSKVVDLLSKDKK 590
               + V+D L  + K
Sbjct: 375 TVTCNIVIDGLCNNGK 390



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 18/341 (5%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN+ ++      D   + K  P + S++ +++ L K  +       F  +    L PD  
Sbjct: 410 GNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSA 469

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           + ++ I+  CK G  S AF VL  + +        T+N LI GL ++ +I E   L  ++
Sbjct: 470 IYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEM 529

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P+V  +N +++ LC       A  + +EM+ +      P++ +++ +I   CK 
Sbjct: 530 RERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKG---ISPNISSFSILIKAFCKA 586

Query: 238 ---GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
                VD+  E+ L +         +T+N L+ G   V    +AK LF   +D       
Sbjct: 587 CDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVV----KAKELFETALDRSFDVGN 642

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
             +  +I++ CKD K+D  + +L  +I +G   D  ++  ++DG    G    A EL   
Sbjct: 643 FLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEK 702

Query: 355 MVSKGCRHDVYSYNILINANC-------KDQKVEDAVCLYR 388
           M+       V +  +  NA+C       KD + E    L+R
Sbjct: 703 MMEMASEGKVKN-KVHQNASCSIQGKKNKDGESEWQTILHR 742


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 155/516 (30%), Positives = 271/516 (52%), Gaps = 5/516 (0%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +   +A+  F  M K+  SP + ++  L+  L K+   D      +++  +G+   
Sbjct: 258 KGGKV--EDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 315

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           L   ++LIN L K+   + A  VL   L   FTPN V +N LI+G C  G + +A R+  
Sbjct: 316 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +     +PN VT N++I G C+      A  + EEM++  G    P   T  +II  LC
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR-GFSINPGAFT--TIIHWLC 432

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            +   + A   L +M  RN+ PN     +L+ G C      +A  L+  +++ G   ++V
Sbjct: 433 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 492

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T NA+I+  CK G M +  RLL+ M++RG   D +TYN+L+ G C  G++    +L   M
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V +G   D ++YN+LI+  C+  K+++AV L+ E  S  + P+V TY  ++ G  +   +
Sbjct: 553 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 612

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +  KL  ++   ++  +S  + T I   C+NG  +EA ++   +R+        TY+ L
Sbjct: 613 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 672

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+G+C +GR++ A  L   ++ +G +P+VV  + +I   CK GQMDK  ++L +M + + 
Sbjct: 673 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 732

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            P+++T+  ++ G+ ++        LLH+M  + +V
Sbjct: 733 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIV 768



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 271/526 (51%), Gaps = 5/526 (0%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+  +EA  F + M+K   +  + ++++L+  L K ++++   S+ K     G  P+
Sbjct: 293 KHGNL--DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPN 350

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             V N LI+  CKMG    A  + G ++     PN+VT N +I G C  G++ +A  + +
Sbjct: 351 EVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILE 410

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++       N   F T+I+ LC       AL+   EM+       +P+     +++ GLC
Sbjct: 411 EMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN---MRPNDGLLTTLVGGLC 467

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G    A EL  ++ ++    N++T N+LI G C   + +EA  L  +M++ G   D +
Sbjct: 468 KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKI 527

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I+  CK+GK+++  +L   M+++G+ PDT TYN L+ G C +G++  A  L+   
Sbjct: 528 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 587

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            S+    +VY+Y ++I+  CK  K+E+   L+ E+L++ +  + + YNTL+    + GN 
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A KL D M+   + P + T+++ I G+C  G + +A  +   +R       +  Y  L
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 707

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I G CK+G++     +   +      P+ +T + MI    K G M  A  LL +M  K  
Sbjct: 708 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGI 767

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           VP  VT+  L  GF +  K  +   +   M+ E L + +++ ++ V
Sbjct: 768 VPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 157/544 (28%), Positives = 266/544 (48%), Gaps = 39/544 (7%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N+    A+  F  +      P + + T LL+ L K  + +    +F+ +   G+ PD+++
Sbjct: 190 NVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYL 248

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            +  IN  CK G    A  +   + +   +PN VT+N LI+GLC  G + EA R  +K+ 
Sbjct: 249 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV 308

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +  ++T++ LINGL +      A  + +E + +      P+ V YN++IDG CK G
Sbjct: 309 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG---FTPNEVVYNTLIDGYCKMG 365

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +  A  +   M  + INPN +T NS+I GFC +   ++A+C+  EM+  G   +   F 
Sbjct: 366 NLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT 425

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDT----------------------------- 329
            +I++ C + + +   R L  M+ R + P+                              
Sbjct: 426 TIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 485

Query: 330 ------VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
                 VT N+L+ G C  G +  A  L   M+ +G   D  +YN LI+  CK+ KVE+ 
Sbjct: 486 GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEG 545

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EM+ + I P   TYN L+ G+ ++G L +A+ L ++ +  D+VP+ +T+   IDG
Sbjct: 546 FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 605

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK   + E  ++F  +     EL    YN LI   C+ G    A KL   ++ KG  P 
Sbjct: 606 YCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT 665

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
             T S++IH +C  G+M+ A  L+ +M  +  +P+ V +  L+ G+ +  +  KVV +L 
Sbjct: 666 TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 725

Query: 564 KMAA 567
           +M++
Sbjct: 726 EMSS 729



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 223/451 (49%), Gaps = 8/451 (1%)

Query: 155 NFLINGLCAEGR---IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           + LI+  C + R      A  +F+ L      P V T   L++ L +      +  +FE 
Sbjct: 178 DLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFET 237

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M         PDV  +++ I+  CK G V+ A +L   M+   ++PNV+TYN+LI G C 
Sbjct: 238 MRQG----VSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCK 293

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
             +  EA     +M+ +GV   ++T++ +IN   K  K ++ N +L+  +++G  P+ V 
Sbjct: 294 HGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVV 353

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YN+L+DG+C +G +  A  +   MVSKG   +  + N +I   CK  ++E A C+  EML
Sbjct: 354 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 413

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
           S     +   + T++  L        AL+ + +M L ++ P+     T + GLCK G   
Sbjct: 414 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 473

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +AV+++  +        + T N LI+GLCK G ++ A +L  ++  +G + D +T +T+I
Sbjct: 474 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 533

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
              CKEG++++   L  +M  +   P   T+  L+ G  +  K  + V L ++  +  L 
Sbjct: 534 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL- 592

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           V ++     ++D   K  K  E    F  LL
Sbjct: 593 VPNVYTYGVMIDGYCKADKIEEGEKLFTELL 623


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 137/349 (39%), Positives = 213/349 (61%), Gaps = 3/349 (0%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           + PNT+T N LI GLC +G+I +A     KL       + V++ TLI+GLC+   T  AL
Sbjct: 3   YHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAAL 62

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            L + +    G + + + V YN++I G+CKD  V+ A +L  +M  + I+PNV+TY++LI
Sbjct: 63  DLLQRVD---GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 119

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            GF  V   K+A  LF +++   ++PD  TFN +++  CKD KM +   +  +M+++G+ 
Sbjct: 120 SGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGII 179

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD VTYNSL+DG+ LV  ++ A+ +F +M   G   D+ SYNILIN  CK +KV+ A+ L
Sbjct: 180 PDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNL 239

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + EM  + I P+V+TYN+L+ GL + G +  AL+L+D+M    V P+  T+ + ID L K
Sbjct: 240 FNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFK 299

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
              V +A+ +    ++   +  + TY  LI+GLCK GRLK A  +F  L
Sbjct: 300 THQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 189/348 (54%), Gaps = 3/348 (0%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G  P+   LN LI  LC  G    AF+   +++   F  + V++  LI+GLC  G    A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L ++++      N V +NT+I G+C+ ++   A  L+ EMV++      P+VVTY+++
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG---ISPNVVTYSAL 118

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           I G    G +  A +L  ++   NI P+  T+N L+ GFC     KE K +F  MM  G+
Sbjct: 119 ISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGI 178

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PDVVT+N++++      +++    +   M Q GVNPD  +YN L++GFC + ++ +A  
Sbjct: 179 IPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMN 238

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF  M  K    +V +YN LI+   K  ++  A+ L  +M    + P+++TYN+++  LF
Sbjct: 239 LFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALF 298

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           +   +  A+ LI K +   + P  +T+   IDGLCK G + +A  +F+
Sbjct: 299 KTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFE 346



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 180/351 (51%), Gaps = 3/351 (0%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           M   P   +   L+  L    Q         +L + G   D      LI+ LCK+G T  
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  +L R+       N V +N +I G+C +  + +A  L+ ++      PNVVT++ LI+
Sbjct: 61  ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G         A+ LF +++ E     KPD  T+N ++DG CKD  + + K +   M  + 
Sbjct: 121 GFFVVGKLKDAIDLFNKIILEN---IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQG 177

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           I P+V+TYNSL+ G+  V +   AK +F  M   GV PD+ ++N +IN  CK  K+DK  
Sbjct: 178 IIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAM 237

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L   M  + + P+ VTYNSL+DG    GRIS A +L   M  +G   ++ +YN +I+A 
Sbjct: 238 NLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL 297

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            K  +V+ A+ L  +   + I+PS+ TY  L+ GL + G L DA  + + +
Sbjct: 298 FKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 182/333 (54%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+ +T N++I GLC  G + +A     ++     + + ++Y +LI G C V + + A  L
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              +    VQ + V +N +I   CKD  ++    L   M+ +G++P+ VTY++L+ GF +
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           VG++  A +LF  ++ +  + D Y++NIL++  CKD+K+++   ++  M+ + I P V+T
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN+L+ G   V  +  A  + + M    V PD  ++   I+G CK   V +A+ +F  + 
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 244

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                  + TYN LI+GL K GR+  A +L  ++  +G  P+++T +++I  L K  Q+D
Sbjct: 245 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVD 304

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           KA  L+   + +   PS  T+  L+ G  +  +
Sbjct: 305 KAIALITKFKDQGIQPSMYTYTILIDGLCKGGR 337



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 167/307 (54%), Gaps = 1/307 (0%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G  P+ +T N +I   C  G++ +     + ++  G + D V+Y +L+ G C VG    A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            +L   +  K  + +   YN +I   CKD+ V DA  LY EM+S+ I P+V+TY+ L+SG
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
            F VG L DA+ L +K+ L ++ PD +TF   +DG CK+  + E   VF  +        
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + TYN L++G   +  + TA  +F+ +   G  PD+ + + +I+  CK  ++DKA +L  
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +M  KN +P+ VT+ +L+ G  ++ + S  + L+ +M    +  + L+ +S ++D L K 
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNS-IIDALFKT 300

Query: 589 KKYRECL 595
            +  + +
Sbjct: 301 HQVDKAI 307



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 175/328 (53%), Gaps = 3/328 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  F D ++ +       S+  L+  L K  +    + L +R++   +  +  + N +
Sbjct: 24  HQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTV 83

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  +CK    + AF +   ++    +PN VT++ LI+G    G++ +A  LF K+ +   
Sbjct: 84  IYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENI 143

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  TFN L++G C+ R       +F  M+ + G I  PDVVTYNS++DG      V+ 
Sbjct: 144 KPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQ-GII--PDVVTYNSLVDGYRLVKEVNT 200

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK +   M    +NP++ +YN LI GFC +    +A  LF EM    + P+VVT+N++I+
Sbjct: 201 AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLID 260

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G++    +L++ M  RGV P+ +TYNS++D      ++ +A  L      +G + 
Sbjct: 261 GLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQP 320

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREM 390
            +Y+Y ILI+  CK  +++DA  ++ ++
Sbjct: 321 SMYTYTILIDGLCKGGRLKDARNIFEDL 348


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 229/423 (54%), Gaps = 6/423 (1%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD+ V N ++   C  G    A  ++  +      P+  T+N LI GLC  GR   A  +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            + +    C P+VVT+  L+   C+      A+KL +EM ++    C PD+VTYN +++G
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKG---CAPDIVTYNVVLNG 245

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           +C++G V+ A E L  +      PN ++YN ++ G    + W++A+ L  EM   G  P+
Sbjct: 246 ICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPN 305

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VVTFN +I++ C+ G ++    +LE M Q G  P++++YN L+  FC   +I +A E   
Sbjct: 306 VVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVE 365

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            MVS+GC  D+ SYN L+ A C++ +V+ A+ L  ++  +   P +I+YNT++ GL + G
Sbjct: 366 LMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAG 425

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
              +AL+L+D+M    + PD  T++T   GLC+   + EAV+ F  +++         YN
Sbjct: 426 KTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYN 485

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            ++ GLCK      A  LF  +   G +P+  T + ++  L  EG + +A +L   + ++
Sbjct: 486 AILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSR 545

Query: 534 NCV 536
             V
Sbjct: 546 GVV 548



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 202/387 (52%), Gaps = 5/387 (1%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           M   P   ++  L+  L    +    +++ + +   G  PD+    +L+   CK      
Sbjct: 160 MPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQ 219

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  +L  +      P+ VT+N ++NG+C EGR+ +A    K L  + C+PN V++N ++ 
Sbjct: 220 AMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLK 279

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           GL        A KL EEM ++    C P+VVT+N +I  LC+ G V+ A E+L QM    
Sbjct: 280 GLFTAERWEDAEKLMEEMAHKG---CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYG 336

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKV 313
             PN ++YN L+  FC      +A   F+E+M   G  PD+V++N ++   C++G++D  
Sbjct: 337 CTPNSLSYNPLLHAFCKQKKIHKAM-EFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVA 395

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             LL  +  +G +P  ++YN+++DG    G+   A EL   M SKG + D+ +Y+ + + 
Sbjct: 396 IELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASG 455

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C++ ++E+AV  + ++    IRP+   YN +L GL +     +A+ L   M  +  +P+
Sbjct: 456 LCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPN 515

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAI 460
             T+   ++GL   G V EA ++F  +
Sbjct: 516 ESTYTILVEGLAYEGLVKEARELFAQL 542



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 205/409 (50%), Gaps = 11/409 (2%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           LI  LCA GR  +A R+       A  P+V+ +N ++ G C       A +L  +M  E 
Sbjct: 110 LIKKLCASGRTADARRVLA-----ASGPDVMVYNAMVAGYCGAGQLDAARRLVADMPVE- 163

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
                PD  TYN++I GLC  G    A  +L  M  R   P+V+TY  L+   C    +K
Sbjct: 164 -----PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYK 218

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  L  EM D G  PD+VT+N ++N  C++G+++     L+ +   G  P+TV+YN ++
Sbjct: 219 QAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVL 278

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            G     R   A +L   M  KGC  +V ++N+LI+  C+   VE A+ +  +M      
Sbjct: 279 KGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCT 338

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P+ ++YN LL    +   +  A++ ++ M      PD  ++ T +  LC+NG V  A+++
Sbjct: 339 PNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIEL 398

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              +++  C   + +YN +I+GL K G+ K A +L   +  KG  PD++T ST+   LC+
Sbjct: 399 LHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCR 458

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           E ++++A      ++     P+   +  +L G  +  +    + L   M
Sbjct: 459 EDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYM 507



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 188/374 (50%), Gaps = 3/374 (0%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G   ++ A+   + M +    P + ++TILL    K   Y   + L   ++  G  PD+ 
Sbjct: 178 GRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIV 237

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N+++N +C+ G    A   L  +      PNTV++N ++ GL    R  +A +L +++
Sbjct: 238 TYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEM 297

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
               C PNVVTFN LI+ LCR      A+++ E+M  ++G  C P+ ++YN ++   CK 
Sbjct: 298 AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQM-PQYG--CTPNSLSYNPLLHAFCKQ 354

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             + KA E +  M  R   P++++YN+L+   C   +   A  L  ++ D G  P ++++
Sbjct: 355 KKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISY 414

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +I+   K GK  +   LL+ M  +G+ PD +TY+++  G C   RI  A   F  +  
Sbjct: 415 NTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQD 474

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            G R     YN ++   CK ++  +A+ L+  M+S    P+  TY  L+ GL   G + +
Sbjct: 475 MGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKE 534

Query: 418 ALKLIDKMQLNDVV 431
           A +L  ++    VV
Sbjct: 535 ARELFAQLCSRGVV 548



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 81/192 (42%), Gaps = 29/192 (15%)

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ-LNDVVPDSF-TFATYIDGLCKNGF 449
           + R + S  +    L  L + G L DAL+L+D +  LN   P +    A  I  LC +G 
Sbjct: 60  TPRRKASSASATERLRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGR 119

Query: 450 VLEAVQV-----------------------FQAIRNCKCELRIE----TYNCLINGLCKM 482
             +A +V                         A R    ++ +E    TYN LI GLC  
Sbjct: 120 TADARRVLAASGPDVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGR 179

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GR   A  +   +  +G +PDVVT + ++   CK     +A  LL +M  K C P  VT+
Sbjct: 180 GRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTY 239

Query: 543 CTLLRGFVQNNK 554
             +L G  Q  +
Sbjct: 240 NVVLNGICQEGR 251


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 270/553 (48%), Gaps = 43/553 (7%)

Query: 72  MIKMKPSPGMTSF-TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG 130
           +++  P  G  ++ T++  + A    +D    LF ++    +FP+L   N +++ LCK G
Sbjct: 143 LLRALPHRGAVAYCTVVCGLYAHGHTHD-ARQLFDQMLHTHVFPNLAAFNKVLHALCKRG 201

Query: 131 ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
               A ++LG++++   + N  T+N  I GLC  GR+ EA RL   +  +A  P+VVT+N
Sbjct: 202 DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYN 260

Query: 191 TLINGLCRTRNTLVALKLFEEMVNE------------FGAICK----------------- 221
           TLI GLC+      A+     M+N+                CK                 
Sbjct: 261 TLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK 320

Query: 222 ---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
              PD VTY S+I+GLC +G V++A EL  + + + I P+++ YNSL+ G C       A
Sbjct: 321 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 380

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             +  EM + G  PD+ T+N +IN  CK G +     ++   I +G  PD  T+N+L+DG
Sbjct: 381 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 440

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C   ++  A +L   M   G   D  +YN ++N  CK  KV +    ++EM+ +   P+
Sbjct: 441 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 500

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            ITYN L+    +   + +A K+I KM    + PD+ +F T I G C+NG +  A  +FQ
Sbjct: 501 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ 560

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +         +T+N LI        +  A K+F  +  KG   D  T   +I   CK  
Sbjct: 561 KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTA 620

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +D+A   L++M  K  +PS  TF  ++     N++  + V ++H M         + + 
Sbjct: 621 NVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK-------IGVV 673

Query: 579 SKVVD-LLSKDKK 590
            +VVD +L+ DKK
Sbjct: 674 PEVVDTILNADKK 686



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 248/517 (47%), Gaps = 35/517 (6%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  F+ M      P   ++  ++  L     +D    ++ R+ + G+ PDL    + +
Sbjct: 69  DAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRL 128

Query: 124 NCLC-------------------------------KMGITSGAFVVLGRILRSCFTPNTV 152
              C                                 G T  A  +  ++L +   PN  
Sbjct: 129 RSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLA 188

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            FN +++ LC  G ++EA  L  K+       N+ T+N  I GLC       A++L + M
Sbjct: 189 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 248

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                A   PDVVTYN++I GLCK     +A   L +M ++   P+  TYN++I G+C +
Sbjct: 249 ----RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKI 304

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
              +EA  L  + +  G  PD VT+ ++IN  C +G +++   L      +G+ PD V Y
Sbjct: 305 SMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVY 364

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           NSL+ G CL G I  A ++   M  +GC  D+ +YNI+IN  CK   + DA  +  + + 
Sbjct: 365 NSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM 424

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           +   P V T+NTL+ G  +   L  AL+L+++M    + PD+ T+ + ++GLCK G V E
Sbjct: 425 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 484

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
             + FQ +    C     TYN LI   C+  +++ A K+  ++  +G  PD V+ +T+I+
Sbjct: 485 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 544

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
             C+ G ++ A  L   +E K    +  TF TL+  F
Sbjct: 545 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 581



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 232/492 (47%), Gaps = 66/492 (13%)

Query: 144 RSCFTPNTVTFNFL--INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           RS  +P T+   ++  I      GR+ +A   F+++++FAC P    +N +++ L     
Sbjct: 42  RSRLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAY 101

Query: 202 TLVALKLFEEM---------------VNEFGAICKPDV-------------VTYNSIIDG 233
              A K++  M               +  F    +P +             V Y +++ G
Sbjct: 102 HDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCG 161

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           L   G    A++L  QM   ++ PN+  +N ++   C   D  EA  L  +++  G+  +
Sbjct: 162 LYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSIN 221

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           + T+N  I   C+ G++ +  RL++ M    V PD VTYN+L+ G C       A     
Sbjct: 222 LFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLR 280

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+++GC  D ++YN +I+  CK   V++A  L ++ + +   P  +TY +L++GL   G
Sbjct: 281 RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG 340

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           ++  AL+L ++ Q   + PD   + + + GLC  G +L A+QV   +    C   I+TYN
Sbjct: 341 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 400

Query: 474 CLINGLCKMG-----------------------------------RLKTACKLFHRLQHK 498
            +INGLCKMG                                   +L +A +L  R+   
Sbjct: 401 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 460

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PD +T +++++ LCK G++++ N+   +M  K C P+ +T+  L+  F ++NK  + 
Sbjct: 461 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 520

Query: 559 VVLLHKMAAEKL 570
             ++ KM+ E L
Sbjct: 521 SKVIVKMSQEGL 532



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 240/540 (44%), Gaps = 54/540 (10%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV   D M +    P + ++  L+  L K       +   +R+ + G  PD F  N +I
Sbjct: 240 EAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 298

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK------- 176
           +  CK+ +   A  +L   +   F P+ VT+  LINGLCAEG +  A  LF +       
Sbjct: 299 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 358

Query: 177 -------------------------LNVFA---CDPNVVTFNTLINGLCRTRNTLVALKL 208
                                    +N  A   C P++ T+N +INGLC+  N   A  +
Sbjct: 359 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 418

Query: 209 FEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
             +      AI K   PDV T+N++IDG CK   +D A +L+ +M +  I P+ ITYNS+
Sbjct: 419 MND------AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + G C      E    F EM+  G  P+ +T+N +I   C+  KM++ ++++  M Q G+
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
           +PD V++N+L+ GFC  G +  A  LF  +  KG      ++N LI A      +  A  
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 592

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           ++ EMLS+  R    TY  L+ G  +  N+  A   + +M     +P   TF   I+ L 
Sbjct: 593 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG----PI 501
            N  V +AV +   +   K  +  E  + ++N   K   +     L   L  KG    P 
Sbjct: 653 VNHRVFQAVGIIHIM--VKIGVVPEVVDTILNADKK--EIAAPKILVEDLMKKGHISYPT 708

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            +V+         C E    +A+D       + CV   V     LR  + N K S V +L
Sbjct: 709 YEVLHEGVQSTIYCLEYGKQRASDPKCRKTTEGCVEINVDGAQ-LRIMLTNLKVSPVWIL 767



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 5/218 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    LN   K+G +  NE    F  MI     P   ++ IL+    ++ + +    
Sbjct: 465 DTITYNSVLNGLCKAGKV--NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 522

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +  +++  GL PD    N LI   C+ G   GA+++  ++    ++    TFN LI    
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 582

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            +  +  A ++F ++       +  T+  LI+G C+T N   A     EM+ + G I  P
Sbjct: 583 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKK-GFI--P 639

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            + T+  +I+ L  +  V +A  ++  M    + P V+
Sbjct: 640 SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 154/543 (28%), Positives = 285/543 (52%), Gaps = 38/543 (6%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FFD M++  PSP + +F+ L+ +  K  + D   SL+  +   G+ PDL + ++LIN L 
Sbjct: 262 FFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321

Query: 128 K------------MGITSG-------------AFVVLG----------RILRSCFTPNTV 152
           +            M +  G             A+V +G          R+L+   +PN V
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T++ LINGLC  GR++EA  +F ++     +P+V+T+++LI+G C++ N      L+  M
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           + + G +  PDVV  + +I+GL + G +D+A     Q   R +  N   +N+LI G   +
Sbjct: 442 LRK-GHV--PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRL 498

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
              ++   ++I M    V PDVVT+  ++    + G++D+   L   ++++G +PD + Y
Sbjct: 499 KRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIY 558

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
            +L+DGFC     +   ++F  M S G   D+  YN+LIN   ++  VE+ + L RE++ 
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             + P ++TYNT++ G   +     A+KL + ++     P++ TF   ID  CK+G + +
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A+ +F ++     E  I TY+CLI+G  K    ++A +L+ ++      P++V+ S +I 
Sbjct: 679 AMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            LCK+G M++A+        ++ +P  + +  L+RG+ +  + ++ ++L   M    ++ 
Sbjct: 739 GLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMP 798

Query: 573 SDL 575
            DL
Sbjct: 799 DDL 801



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 223/481 (46%), Gaps = 51/481 (10%)

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI------ 219
           R  E A  F  L    C P V +F  + + L R R    A ++F+ MV +FG +      
Sbjct: 74  RFFEWAENFLGL----CHP-VQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEF 128

Query: 220 --------CKPDVVTYNSIIDGLCKDGFVDKAKELLL---------------QMKDRNIN 256
                     P  V Y+ ++   C++G VD+A +                  +M D  I+
Sbjct: 129 HGSFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLID 187

Query: 257 PNVI---------------TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            + I                Y  +   F    + ++       +++ G+ P +V  N ++
Sbjct: 188 SDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKIL 247

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C   ++   +   ++M++ G +P+ VT+++L++ +C   R+  A  L+  M+ KG  
Sbjct: 248 KGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIV 307

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+  Y+ILIN   +  K+E+   L+   L+  ++  V+ +++++    +VG+LG A+++
Sbjct: 308 PDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEV 367

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
             +M    + P+  T++  I+GLC+NG VLEA  VF  I     E  + TY+ LI+G CK
Sbjct: 368 YTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCK 427

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              L+    L+  +  KG +PDVV CS +I+ L ++G MD+A         +    +   
Sbjct: 428 SENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYL 487

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           F  L+ G  +  K+++  + ++ +     V+ D+   + +V  L++  +  E L  F  L
Sbjct: 488 FNALIDGCFR-LKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQL 546

Query: 602 L 602
           L
Sbjct: 547 L 547



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 177/415 (42%), Gaps = 67/415 (16%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F  ++K    P + +++ L+    K++       L+  +   G  PD+ V ++LI
Sbjct: 398 EACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI 457

Query: 124 NCLCKMGITSGAF---------------VVLGRILRSCF--------------------T 148
           N L + G+   A                 +   ++  CF                     
Sbjct: 458 NGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVI 517

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ VT+  L+ GL  +GR+ EA  LF +L      P+ + + TLI+G C+ R+    L++
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 209 FEEMVNE--FGAIC------------------------------KPDVVTYNSIIDGLCK 236
           F+ M +   F  IC                              +PD+VTYN++I G C 
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
                KA +L   +K     PN IT+  LI  +C      +A  +F  M++ G +P+++T
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           ++ +I+   K    +    L E M+   V+P+ V+Y+ L+DG C  G +  A   F   +
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAI 757

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
            +    DV +Y ILI   CK  ++ +A+ LY  ML   I P  +    L    FQ
Sbjct: 758 GRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQ 812



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 136/282 (48%), Gaps = 38/282 (13%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F  ++K   SP    +  L+    K +   T + +FK + SNG+FPD+ + N+L
Sbjct: 537 DEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVL 596

Query: 123 INCLCKMGITSGAFVVLGRILRSCF----------------------------------- 147
           IN   + G       +L  I++                                      
Sbjct: 597 INMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRT 656

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            PN +TF  LI+  C +GR+ +A  +F  +     +PN++T++ LI+G  +T NT  A +
Sbjct: 657 QPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFE 716

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L+E+M+   G    P++V+Y+ +IDGLCK G +++A         R++ P+VI Y  LI 
Sbjct: 717 LYEKML---GDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIR 773

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           G+C V    EA  L+  M+ NG+ PD +   A+  Y  +D +
Sbjct: 774 GYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQ 815


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 275/512 (53%), Gaps = 12/512 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+  ++  L K K+ +  V L   +  +   P+ F   +L++ LCK G    A  +
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           LG + R     + V ++ LI+G C++G +     LF ++      PNVV ++ LING C+
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +   M  E G   +PDV TY  +I GLCKDG   KA +L   M ++   P+
Sbjct: 128 KGLWREATAVLHTMT-ERG--IQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184

Query: 259 VITYNSLICGFC---CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            +TYN LI G C   C+ D   A  +F  M++ G + +VV++N +I   C +GK+D+  +
Sbjct: 185 TVTYNVLINGLCKEGCIGD---AFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 316 LLELMIQRG--VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           L   +++ G  V PD +T+N+++ G C  GR+ +A E++ +M+ +G   ++++ +ILI  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             K   ++ A+ L++ +    + PS  TY+ ++ G  ++  L  A  L  +M+++ + P 
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            F + T +  LCK   + +A ++FQ ++   CE    ++N +I+G  K G + +A +L +
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +Q  G  PD  T S+ I+ L K GQM++A      M A    P    + +L++GF  N+
Sbjct: 422 DMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLND 481

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           +  +V+ LL +M A+  V+ DL +++ ++  L
Sbjct: 482 EIEEVINLLRQM-ADMGVILDLEITNSILTFL 512



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 150/466 (32%), Positives = 241/466 (51%), Gaps = 44/466 (9%)

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            K++N+    P++V++NT+INGLC+ +    A+ L  EM    G+ C+P+  TY  ++DG
Sbjct: 1   MKRINIL---PDIVSYNTIINGLCKEKRLEKAVDLLVEME---GSSCEPNSFTYCILMDG 54

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK+G V++A  LL +MK + +  +V+ Y++LI GFC        K LF EM++ G+ P+
Sbjct: 55  LCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPN 114

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VV ++ +IN  CK G   +   +L  M +RG+ PD  TY  ++ G C  GR  +A +LF 
Sbjct: 115 VVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFD 174

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M  KG      +YN+LIN  CK+  + DA  ++  ML +  R  V++YNTL+ GL   G
Sbjct: 175 LMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNG 234

Query: 414 NLGDALKLIDKM--QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-------------- 457
            L +A+KL   +    N V PD  TF T I GLCK G + +AV+++              
Sbjct: 235 KLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFT 294

Query: 458 ------QAIRNCKCELRIE---------------TYNCLINGLCKMGRLKTACKLFHRLQ 496
                 + I++   +  +E               TY+ +I+G CKM  L  A  LF R++
Sbjct: 295 CHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMK 354

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G  P +   +T++  LCKE  +++A  L  +M+  NC P  ++F  ++ G ++     
Sbjct: 355 ISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIH 414

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
               LL+ M    L     + SS  ++ LSK  +  E    F  ++
Sbjct: 415 SAKELLNDMQQMGLTPDAYTYSS-FINRLSKLGQMEEAKGAFDSMI 459



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 202/413 (48%), Gaps = 1/413 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            FD M++   SP +  ++ L+    K   +    ++   +   G+ PD++    +I  LC
Sbjct: 102 LFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLC 161

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    A  +   +      P+TVT+N LINGLC EG I +A ++F+ +        VV
Sbjct: 162 KDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV 221

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           ++NTLI GLC       A+KLF  ++ E G   +PDV+T+N++I GLCK+G +DKA E+ 
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLL-EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIY 280

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M +R    N+ T + LI  +       +A  L+  +   G+ P   T++ MI+  CK 
Sbjct: 281 DTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM 340

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             ++    L   M   G++P    YN+LM   C    + +AR LF  M    C  D  S+
Sbjct: 341 HMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISF 400

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           NI+I+   K   +  A  L  +M    + P   TY++ ++ L ++G + +A    D M  
Sbjct: 401 NIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIA 460

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           + + PD+  + + I G   N  + E + + + + +    L +E  N ++  LC
Sbjct: 461 SGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC 513



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 147/315 (46%), Gaps = 5/315 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF--PDLFVLN 120
            +A   F+ M++      + S+  L+  L  N + D  + LF  L  +G +  PD+   N
Sbjct: 202 GDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFN 261

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
            +I  LCK G    A  +   ++      N  T + LI      G I +A  L+K+++  
Sbjct: 262 TVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKL 321

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+  T++ +I+G C+      A  LF  M  +   +  P +  YN+++  LCK+  +
Sbjct: 322 GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRM--KISGL-SPTLFDYNTLMASLCKESSL 378

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           ++A+ L  +MK+ N  P+ I++N +I G     D   AK L  +M   G+ PD  T+++ 
Sbjct: 379 EQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSF 438

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           IN   K G+M++     + MI  G+ PD   Y+SL+ GF L   I     L   M   G 
Sbjct: 439 INRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGV 498

Query: 361 RHDVYSYNILINANC 375
             D+   N ++   C
Sbjct: 499 ILDLEITNSILTFLC 513


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 259/494 (52%), Gaps = 8/494 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   S+ ++L +L          ++F  + S G+ P+ +   L++  LC +     A +
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  + +    PN++ +  LI+ L    R+ EA +L +++ +  C P+V TFNT+I G C
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R    L   KL + M+ +      P+ +TY  ++ GLCK   +D+A+ LL ++      P
Sbjct: 292 RLNRVLEGAKLVDRMILKG---FTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GP 344

Query: 258 NVITYNSLICGFCCVDDWKEAKC-LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           NV+ +N+L+ GF       EA   ++ +M++NG  PDV TF+ ++N  CK G       L
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           +  M  +G  P+  TY  L+DGFC  G++  A  +   M++KG   +   YN LI+A CK
Sbjct: 405 VNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCK 464

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             K+ +A+ ++ EM S+  +P + T+N+L+ GL +V  + DAL L   M L  V+ +S T
Sbjct: 465 HGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVT 524

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           F T I    + G + EA+++   +    C L   TYN LI  LCK G ++    LF  + 
Sbjct: 525 FNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMI 584

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG  P ++TC+ +I+  C  G++  A + + DM  +   P  VT+ +L+ G  +  +  
Sbjct: 585 RKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQ 644

Query: 557 KVVVLLHKMAAEKL 570
           + + L  K+ AE +
Sbjct: 645 EALNLFEKLQAEGI 658



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 158/539 (29%), Positives = 274/539 (50%), Gaps = 45/539 (8%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN  S  +  F+D M+    SP   +F +++  L    + D    L + +  +G  P+  
Sbjct: 188 GNCPSVASNVFYD-MLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSM 246

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +   LI+ L K      A  +L  +      P+  TFN +I G C   R++E A+L  ++
Sbjct: 247 IYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRM 306

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
            +    PN +T+  L++GLC+T     A  L  +       +  P+VV +N++++G  ++
Sbjct: 307 ILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSK-------VPGPNVVHFNTLVNGFVRN 359

Query: 238 GFVDKAKELLL-QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           G +++A   +  +M +    P+V T+++L+ G C    +  A  L  +M   G +P++ T
Sbjct: 360 GRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNT 419

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +I+  CK G++++   +L  M+ +G + +TV YN+L+   C  G+I  A ++F  M 
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           SKGC+ D++++N LI   C+  ++EDA+ LYR+M+ E +  + +T+NTL+    + G + 
Sbjct: 480 SKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQ 539

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ---------AIRNCKCEL 467
           +ALKL++ M       D  T+   I  LCK G V + + +F+         +I  C   +
Sbjct: 540 EALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILI 599

Query: 468 R--------------------------IETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
                                      I TYN LINGLCK GR++ A  LF +LQ +G  
Sbjct: 600 NGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQ 659

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF-VQNNKKSKVV 559
           PD +T +T+I WLC+EG  D A  LL        VP++VT+  L+  F  Q+N + + +
Sbjct: 660 PDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTI 718



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 200/385 (51%), Gaps = 6/385 (1%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C+P   +YN ++D L        A  +   M  + ++PN  T+  ++   C V++   A 
Sbjct: 171 CEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNAC 230

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L  +M  +G  P+ + +  +I+   K  ++D+  +LLE M   G  PD  T+N+++ GF
Sbjct: 231 LLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGF 290

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C + R+    +L   M+ KG   +  +Y  L++  CK  ++++A    + +LS+   P+V
Sbjct: 291 CRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEA----QALLSKVPGPNV 346

Query: 400 ITYNTLLSGLFQVGNLGDALKLI-DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           + +NTL++G  + G L +A   + DKM  N  VPD FTF+T ++GLCK G    A+++  
Sbjct: 347 VHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVN 406

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +    C+  + TY  LI+G CK G+L+ A  +   +  KG   + V  + +I  LCK G
Sbjct: 407 DMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHG 466

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
           ++ +A D+  +M +K C P   TF +L+ G  + ++    + L   M  E ++ + ++ +
Sbjct: 467 KIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFN 526

Query: 579 SKVVDLLSKDKKYRECLNQFRHLLF 603
           + +   L +  + +E L     +LF
Sbjct: 527 TLIHAFLRRG-EIQEALKLVNDMLF 550


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 158/535 (29%), Positives = 271/535 (50%), Gaps = 8/535 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+K   +P   SF IL+   A+ ++ D  V+ F+ +      PDL    +L++CLCK G+
Sbjct: 145 MLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGM 204

Query: 132 TSGAFVVLGRILRSCFT-PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
              AF V   ++   F  P+      ++  L    R+ EA  +F ++      P+ + +N
Sbjct: 205 DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYN 264

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           T+I+GL +  +   ALK+ + M+ +    C P  VTY  +++ LCK G +++A+EL   M
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAK---ACVPTEVTYGILVNSLCKAGTLERAEELFRVM 321

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
                 PN + Y SLI GF      KEA  LF EM++ G +PDV+T   MI+  CK G  
Sbjct: 322 AASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF 381

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           ++  +  E M++ G  P+ VTY +++ G   +GR++ A  +   M++ GC  D  +Y  L
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICL 441

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL-KLIDKMQLND 429
           ++  CK  ++++A  L  E+      P++  Y++L+ GL   G++ + L  L ++ +   
Sbjct: 442 LDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAA 501

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM--GRLKT 487
              D     + I GLCK G + EA ++FQ + +  C+    TYN LINGLC+    R++ 
Sbjct: 502 ENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVER 561

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  L H L+  G +PD VT + +   LCK G++D+A  +L +  ++      V +  L  
Sbjct: 562 AFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCT 621

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           G     +  + V L  +M  +     D +    +++ L K KK  +    F  ++
Sbjct: 622 GLCYQGQVDRAVSLFQEMVRQG-GAPDAAAYCCIINGLIKGKKLEDACKFFDEMI 675



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 156/562 (27%), Positives = 268/562 (47%), Gaps = 46/562 (8%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    ++   K+G+  + EA+   D M+     P   ++ IL+  L K    +    
Sbjct: 259 DAIAYNTMIDGLAKAGH--AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF+ + ++G  P+  +   LI+   K G    A  +   ++ + + P+ +T   +I+GLC
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G   +AA+ F+++    C PNVVT+ T+I GL +      A ++ + M+      C P
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG---CFP 433

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC-------CVDD- 274
           D VTY  ++DG CK G +D+A +LL ++   + +PN+  Y+SL+ G C        +DD 
Sbjct: 434 DSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDL 493

Query: 275 ----------------------------WKEAKCLFIEMMDNGVQPDVVTFNAMINYNC- 305
                                         EA  +F  M+  G +PD  T+N +IN  C 
Sbjct: 494 FEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCR 553

Query: 306 -KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            ++ ++++   LL  +   G  PD VTY  L  G C +G + RA ++     S+G   DV
Sbjct: 554 SRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADV 613

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y  L    C   +V+ AV L++EM+ +   P    Y  +++GL +   L DA K  D+
Sbjct: 614 VAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDE 673

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL--RIETYNCLINGLCKM 482
           M      P   T+   +  LC  G V EA   F+ +   + EL   +  Y+ LI+G CK 
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGML-ARGELVGSVMIYDALIHGFCKA 732

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            ++  A KLF  +  +G +P  VT +++   L + G+ +KA +LL +M A    P   TF
Sbjct: 733 LKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATF 792

Query: 543 CTLLRGFVQNNKKSKVVVLLHK 564
             +L G  ++++  K++ L+ +
Sbjct: 793 TAILDGLRKSDESGKLLKLVQE 814



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 247/532 (46%), Gaps = 41/532 (7%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP-DLFVLNLLINCLCKMGITS 133
           + P  G    + +  +L   K   T +S F+       F  D+F  N L+N L      S
Sbjct: 77  LGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYS 136

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
             + +   +L++   PNT +FN LI       R  +A   F+ +    C P++ TF  L+
Sbjct: 137 QCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILV 196

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           + LC+      A ++F EM+        PD   + +++  L K   V +A+E+  QM+  
Sbjct: 197 DCLCKAGMDEKAFEVFHEMMAM--GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKC 254

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
              P+ I YN++I G       +EA  +   M+     P  VT+  ++N  CK G +++ 
Sbjct: 255 GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERA 314

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L  +M   G  P++V Y SL+ GF   GR+  A  LF  MV  G R DV ++ ++I+ 
Sbjct: 315 EELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDG 374

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK    E A   + EM+    +P+V+TY T++ GL ++G + +A +++  M  +   PD
Sbjct: 375 LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPD 434

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN---------------- 477
           S T+   +DG CK G + EA Q+   +  C     ++ Y+ L+                 
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLF 494

Query: 478 --------------------GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC-- 515
                               GLCK GRL  AC++F R+  +G  PD  T + +I+ LC  
Sbjct: 495 EQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRS 554

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +E ++++A  LL D+E    +P  VT+  L  G  +  +  + V +L + ++
Sbjct: 555 RENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASS 606



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 162/544 (29%), Positives = 248/544 (45%), Gaps = 42/544 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F  M K    P   ++  ++  LAK       + +   + +    P      +L
Sbjct: 242 KEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGIL 301

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G    A  +   +  S F PN+V +  LI+G    GR+ EA  LF ++     
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V+T   +I+GLC++ N   A K FEEM+      CKP+VVTY +II GL K G V  
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR---GGCKPNVVTYTTIIQGLSKIGRVAN 418

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  ++  M      P+ +TY  L+ GFC +    EA  L  E+      P++  +++++ 
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVK 478

Query: 303 YNCKDGKMD-KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
             C  G ++  ++ L E       N D     S++ G C  GR+  A  +F  MVS+GC+
Sbjct: 479 GLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538

Query: 362 HDVYSYNILINANC--KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            D  +YNILIN  C  ++ +VE A  L  ++      P  +TY  L  GL ++G +  A+
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAV 598

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           K++++        D   +     GLC  G V  AV +FQ +           Y C+INGL
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA---------------- 523
            K  +L+ ACK F  +  KG  P V T + ++  LC  G +D+A                
Sbjct: 659 IKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGS 718

Query: 524 ---NDLLL-----------------DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
               D L+                 DM ++  VP+ VT  +L  G V++ K  K   LL 
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778

Query: 564 KMAA 567
           +MAA
Sbjct: 779 EMAA 782



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%)

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYNCL+N L           +   +   G  P+  + + +I    +  + D A      M
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           + K C P   TF  L+    +     K   + H+M A   V  D +L + +V  L K K+
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 591 YRECLNQFRHL 601
            +E    F  +
Sbjct: 241 VKEAREVFGQM 251


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 261/512 (50%), Gaps = 4/512 (0%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILL-TMLAKNKQYDTVVSLFKRLNSNGLFP 114
           +S +     ++  F  +I+++  P   +F +L+ T  +K    D + +L   +   GL P
Sbjct: 183 RSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATL-STMQGFGLSP 241

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D    N L+N  C+ G+   A  +L R+ R    P   T+N L++     G I +A ++ 
Sbjct: 242 DAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV 301

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           + +  +  +P++ T+N L  GLC+      A +L +EM  E  +   PDVVTYN+++D  
Sbjct: 302 ESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM--ERLSTALPDVVTYNTLVDAC 359

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
            K      A  LL +M+D+ + P ++T+N ++   C     +EA     ++ + G+ PDV
Sbjct: 360 FKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDV 419

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +T+N +I+  CK G + K   L++ M+ +G+  DT T N+++   C + R   A EL  S
Sbjct: 420 ITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHS 479

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
              +G   D  SY  ++ A  K+   E A+ L+ +M+  ++ PS+ TYNTL+ GL ++  
Sbjct: 480 PPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMER 539

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +A+  ++++    +VPD  T+   I   CK G +  A +    +     +  + T N 
Sbjct: 540 LKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNT 599

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L+NGLC  G+L  A KLF     KG   DV+T +T+I  +CK G +D A     DME K 
Sbjct: 600 LMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG 659

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
             P   T+  +L    +  +  +   +LHK+A
Sbjct: 660 LQPDAFTYNVVLSALSEAGRSEEAHNMLHKLA 691



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 230/492 (46%), Gaps = 44/492 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL---FKRLNSNGLFPDLFVLN 120
           +A    + M      P + ++ +L   L +  + D    L    +RL++    PD+   N
Sbjct: 296 QATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTA--LPDVVTYN 353

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
            L++   K   +S A  +L  +      P  VT N ++  LC EG++ EA    +K+   
Sbjct: 354 TLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEE 413

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+V+T+NTLI+  C+  N   A  L +EMV   G   K D  T N+++  LCK    
Sbjct: 414 GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMV---GKGLKMDTFTLNTVLYNLCKMKRY 470

Query: 241 DKAKELLL-----------------------------------QMKDRNINPNVITYNSL 265
           + A+ELL                                    QM +R + P++ TYN+L
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G C ++  KEA     E+++ G+ PD  T+N +I+  CK+G ++   R    M++   
Sbjct: 531 IKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSF 590

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD VT N+LM+G CL G++ +A +LF S V KG + DV +YN LI + CK   V+ A+ 
Sbjct: 591 KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALH 650

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
            + +M  + ++P   TYN +LS L + G   +A  ++ K+  +  +  SF          
Sbjct: 651 FFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSA 710

Query: 446 KNGFVLEAVQVFQAIRNCKCELR-IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
               V E     +A  + K +   +ETY   +NGLC  G+LK A  +   +  KG   D 
Sbjct: 711 DEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDS 770

Query: 505 VTCSTMIHWLCK 516
            T  T++  L K
Sbjct: 771 STYITLMEGLIK 782



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 213/457 (46%), Gaps = 43/457 (9%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARL--FKKLNVFACDPNVVTFNTLINGLCRTRN 201
           R    P+    N +++ L      +  A L  F+ L      PN  TFN L++  C    
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              AL     M   FG    PD VTYN++++  C+ G + +A+ LL +MK   I P   T
Sbjct: 224 LADALATLSTMQG-FG--LSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPT 280

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           YN+L+  F  +   K+A  +   M   G +PD+ T+N +    C+ GK+D+  RL + M 
Sbjct: 281 YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEME 340

Query: 322 QRGVN-PDTVTYNSLMDGFCLVGRISR-ARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           +     PD VTYN+L+D  C   R S  A  L   M  KG +  + ++NI++ + CK+ K
Sbjct: 341 RLSTALPDVVTYNTLVDA-CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +E+A+    ++  E + P VITYNTL+    + GN+  A  L+D+M    +  D+FT  T
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 440 YIDGLCK----------------NGFVLEAVQVFQAIR------NCKCELR--------- 468
            +  LCK                 GFV + V     +       N +  LR         
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 469 ----IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I TYN LI GLC+M RLK A    + L  KG +PD  T + +IH  CKEG ++ A 
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
                M   +  P  VT  TL+ G   + K  K + L
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKL 616



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 204/424 (48%), Gaps = 10/424 (2%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG--FVD 241
           P     +  ++   R R   +A +L   +    G   +P +   N+++  L +       
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRG--VRPSLQAANAVLSALSRSPSTLPQ 190

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            + ++   + +  ++PN  T+N L+   C      +A      M   G+ PD VT+N ++
Sbjct: 191 ASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL 250

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N +C+ G + +   LL  M + G+ P   TYN+L+  F  +G I +A ++  SM + G  
Sbjct: 251 NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE 310

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIR---PSVITYNTLLSGLFQVGNLGDA 418
            D+ +YN+L    C+  KV++A  L  EM  ER+    P V+TYNTL+   F+     DA
Sbjct: 311 PDLRTYNVLAVGLCQAGKVDEAFRLKDEM--ERLSTALPDVVTYNTLVDACFKWRCSSDA 368

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           L+L+++M+   V P   T    +  LCK G + EA+   + I        + TYN LI+ 
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK G +  A  L   +  KG   D  T +T+++ LCK  + + A +LL     +  VP 
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           EV++ T++  + +       + L  +M   KL+ S +S  + ++  L + ++ +E +++ 
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS-ISTYNTLIKGLCRMERLKEAIDKL 547

Query: 599 RHLL 602
             L+
Sbjct: 548 NELV 551



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 194/391 (49%), Gaps = 6/391 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTL--VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           P++   N +++ L R+ +TL   +L +F  ++        P+  T+N ++   C  G + 
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIE---LRLHPNHYTFNLLVHTHCSKGTLA 225

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A   L  M+   ++P+ +TYN+L+   C      EA+ L   M  +G+ P   T+N ++
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS-KGC 360
           +   + G + +  +++E M   G  PD  TYN L  G C  G++  A  L   M      
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTA 345

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             DV +YN L++A  K +   DA+ L  EM  + ++P+++T+N ++  L + G L +AL 
Sbjct: 346 LPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALG 405

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
            ++K+    + PD  T+ T ID  CK G V +A  +   +     ++   T N ++  LC
Sbjct: 406 KLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           KM R + A +L H    +G +PD V+  T++    KE   + A  L   M  +  +PS  
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           T+ TL++G  +  +  + +  L+++  + LV
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNELVEKGLV 556



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 76/175 (43%), Gaps = 4/175 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F+  ++      + ++  L+  + K    DT +  F  +   GL PD F  N++
Sbjct: 611 DKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVV 670

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME-AARLFKKLNVFA 181
           ++ L + G +  A  +L ++  S     +     L      E  + E   +   + +  A
Sbjct: 671 LSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKA 730

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
            D  + T+   +NGLC       A  + +EM+ +   +   D  TY ++++GL K
Sbjct: 731 QDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPV---DSSTYITLMEGLIK 782


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 164/605 (27%), Positives = 293/605 (48%), Gaps = 77/605 (12%)

Query: 62  SNEAVYFFDCMIKMKP--SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
           S  A+     M+K     SP + ++  ++  L +  +     +LF  +   G+ PD+   
Sbjct: 206 SQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTY 265

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
             +I+ LCK      A +VL +++ + F PN VT+N +I+G    G+  E A +F+++  
Sbjct: 266 TSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTS 325

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY------------ 227
               PN+VT N+ ++ LC+   +  A + F+ M  +     KP++VTY            
Sbjct: 326 QGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGH---KPNLVTYSVLLHGYATEGC 382

Query: 228 -----------------------NSIIDGLCKDGFVDKAKELLLQMKDRNINPNV----- 259
                                  N +ID   K G +D+   +  QM+++ + P+      
Sbjct: 383 FVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGI 442

Query: 260 ------------------------------ITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
                                         I Y+SLI GFC   +  +AK L  EMM  G
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRG 502

Query: 290 V-QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           + +P++V FN++IN  CK+G++ + + + + +I  G  PD +T+NSL+DG+ LVG+I +A
Sbjct: 503 IPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKA 562

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
             +  +M+S G   DV SYN LI+  C++ +++D + L+ EMLS+ ++P+ ITY  +L G
Sbjct: 563 FGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHG 622

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           LF  G    A K+  +M  +    D  T    + GLC+N    EA+ +F+ +     +  
Sbjct: 623 LFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFN 682

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           I   N +I+ + K+ + + A +LF  +   G +P+  T   MI  L KEG +++A+++  
Sbjct: 683 IAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFS 742

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            ME   C PS      ++R  ++  +  K    + K+  +++ + + S  S ++ L S++
Sbjct: 743 LMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISL-EASTVSLLMALFSRE 801

Query: 589 KKYRE 593
            KY E
Sbjct: 802 GKYWE 806



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 162/552 (29%), Positives = 273/552 (49%), Gaps = 31/552 (5%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS-- 78
            F+ +  R P      SS   +DG S+A  L +R                C  + +P   
Sbjct: 77  GFFTALARAP------SSAACRDGPSLAVALFNR---------------ICREEARPRVA 115

Query: 79  -PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
            P + ++ IL+    + ++     +LF R    GL  D+ V ++L+ CL     +     
Sbjct: 116 LPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVN 175

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           ++L R+      P+T+++N ++  LC + R   A  L   +      C PNVVT+NT+I+
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           GL R      A  LF EM+ + G +  PDVVTY SIID LCK   +DKA+ +L QM    
Sbjct: 236 GLFREGEVSKACNLFHEMMQQ-GVV--PDVVTYTSIIDALCKARAMDKAELVLRQMISNG 292

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PN +TYN +I G+     WKE   +F EM   G+ P++VT N+ ++  CK GK  +  
Sbjct: 293 FQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAA 352

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
              + M  +G  P+ VTY+ L+ G+   G       LF SM   G   D   +NI+I+A 
Sbjct: 353 EFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAY 412

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K   +++ + ++ +M  + + P   TY  +++   ++G L DA+   ++M    + P+ 
Sbjct: 413 GKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEG 472

Query: 435 FTFATYIDGLCKNGFVLEAVQ-VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             + + I G C +G +++A + V + +        I  +N +IN LCK GR+  A  +F 
Sbjct: 473 IVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFD 532

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            + H G  PDV+T +++I      G+++KA  +L  M +    P  V++ TL+ G+ +N 
Sbjct: 533 FVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNG 592

Query: 554 KKSKVVVLLHKM 565
           +    ++L  +M
Sbjct: 593 RIDDGLILFGEM 604



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 199/418 (47%), Gaps = 6/418 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P V T+N L++  CRTR   V   LF   +       K DV+  + ++  L      D  
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTG---LKMDVIVASILLKCLYHAKRSDDV 173

Query: 244 KELLL-QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM--DNGVQPDVVTFNAM 300
             LLL +M +  + P+ I+YN+++   C     + A  L   M+    G  P+VVT+N +
Sbjct: 174 VNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTV 233

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+   ++G++ K   L   M+Q+GV PD VTY S++D  C    + +A  +   M+S G 
Sbjct: 234 IHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGF 293

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
           + +  +YN +I+      + ++   ++REM S+ + P+++T N+ +S L + G   +A +
Sbjct: 294 QPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAE 353

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
             D M      P+  T++  + G    G  ++ + +F ++           +N +I+   
Sbjct: 354 FFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYG 413

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G +     +F ++Q +G IPD  T   +I    + G++  A D    M A    P  +
Sbjct: 414 KRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGI 473

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            + +L++GF  +    K   L+ +M +  +   ++   + +++ L K+ +  E  + F
Sbjct: 474 VYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIF 531



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 186/398 (46%), Gaps = 4/398 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E +  F  M +    P   ++ I++   ++  +    +  F ++ + GL P+  V + L
Sbjct: 419 DETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSL 478

Query: 123 INCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I   C  G +     +V   + R    PN V FN +IN LC EGR++EA  +F  +    
Sbjct: 479 IQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIG 538

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V+TFN+LI+G         A  + + M++   A  +PDVV+YN++IDG C++G +D
Sbjct: 539 ERPDVITFNSLIDGYGLVGKIEKAFGVLDAMIS---AGIEPDVVSYNTLIDGYCRNGRID 595

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
               L  +M  + + P  ITY  ++ G         AK +  EM+++G   D+ T   ++
Sbjct: 596 DGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIIL 655

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C++   D+   + + +    V  +    N+++D    V +   A+ELF S+ + G  
Sbjct: 656 GGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLV 715

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  +Y ++I    K+  VE+A  ++  M      PS    N ++  L + G +  A   
Sbjct: 716 PNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNY 775

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           + K+    +  ++ T +  +    + G   E V++  A
Sbjct: 776 MFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLLPA 813


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 170/588 (28%), Positives = 274/588 (46%), Gaps = 79/588 (13%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  F  M K   +P + ++T L+  L K  ++D    + + + + G  PD    + LI
Sbjct: 110 EALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLI 168

Query: 124 NCLCKMGITSGAF------------------------------------VVLGRILRSCF 147
           + LCK G    AF                                     VLG ++   F
Sbjct: 169 DGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF 228

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           TP  + FN +ING C    +  A +L + +    C PNV TF  LI GLC+      A +
Sbjct: 229 TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQ 288

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L E+MV   G  C P+VVTY+++I+GLCK G VD A EL   M+ RN  PNV+T+N LI 
Sbjct: 289 LLEKMV--MGG-CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILID 345

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN- 326
           G C     +EA+ L+  M + G  PD++T+N++I+  CK  ++D+  +L + + + GV+ 
Sbjct: 346 GLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSA 405

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            + VTY++L  G+  +GR++ A  +F  +V KG   D+ +Y  LI   CK  +  + V L
Sbjct: 406 ANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVEL 465

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG--- 443
             EM S+   P V T + +L GLF+  +   A++L D M       D+  +   ++G   
Sbjct: 466 VEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMAR 525

Query: 444 -----------------------------------LCKNGFVLEAVQVFQAIRNCKCELR 468
                                              LC+ G   +A Q+   +        
Sbjct: 526 ASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAA 585

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + +YN L++GL ++ R   A ++F  +   GP P++ T + +I WLC   ++D A +L+ 
Sbjct: 586 VSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQ 645

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            M    C P   T  TL+ G+ ++ +      LL +M    L  +D +
Sbjct: 646 RMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTT 693



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 156/518 (30%), Positives = 263/518 (50%), Gaps = 9/518 (1%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L ML +  +    ++LF+   +    P+ F   +LI      G    A  +L  +  S F
Sbjct: 29  LDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGF 88

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
             N V    L+ GLC  GR++EA   F+ +    C P+V+T+  L++ LC+      A  
Sbjct: 89  EGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQG 147

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +  EMV +    C PD VT++++IDGLCK G  ++A  +L  +  R +  +   + ++I 
Sbjct: 148 MLREMVAQG---CAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQ 204

Query: 268 GFCCVDDWKE--AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
             C   +  E  +K L + ++  G  P V+ FN +IN  CK   +D   +LLE+MI++G 
Sbjct: 205 RLCNKYNSVELASKVLGV-VIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGC 263

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P+  T+  L+ G C   R+  A++L   MV  GC  +V +Y+ +IN  CK  +V+DA  
Sbjct: 264 VPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYE 323

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L++ M      P+V+T+N L+ GL +   + +A +L  +M+     PD  T+ + IDGLC
Sbjct: 324 LFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLC 383

Query: 446 KNGFVLEAVQVFQAIRNCKCE-LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           K+  V EA Q+FQ I           TY+ L +G   +GR+  AC++F  L  KG  PD+
Sbjct: 384 KSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDL 443

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
            T +++I   CK  +  +  +L+ +M +K   P   T   +L G  + N   + + L   
Sbjct: 444 ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDS 503

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           MAA +    D  + + VV+ +++  K+ + L     ++
Sbjct: 504 MAA-RGCTDDALIYNLVVEGMARASKHDKALAVLEQVI 540



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 222/409 (54%), Gaps = 6/409 (1%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           RS    N  + N  ++ LC   R  EA  LF+      C PN  T+  LI G     +  
Sbjct: 15  RSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLD 74

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           +A++L EEM +   +  + + V + +++ GLC  G V +A E    M  ++  P+V+TY 
Sbjct: 75  IAIQLLEEMKS---SGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYT 130

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +L+   C    + EA+ +  EM+  G  PD VTF+ +I+  CK G  ++  R+LE +IQR
Sbjct: 131 ALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQR 190

Query: 324 GVNPDTVTYNSLMDGFC-LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           G+      + +++   C     +  A ++   +++KG    V  +N++IN  CK + ++ 
Sbjct: 191 GMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDS 250

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L   M+ +   P+V T+  L++GL +   +G+A +L++KM +    P+  T++T I+
Sbjct: 251 AYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVIN 310

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK G V +A ++FQ +    C   + T+N LI+GLCK  R++ A +L+HR++  G  P
Sbjct: 311 GLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAP 370

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDM-EAKNCVPSEVTFCTLLRGFV 550
           D++T +++I  LCK  Q+D+A  L   + E+     + VT+ TL  G+ 
Sbjct: 371 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYA 419



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 213/447 (47%), Gaps = 5/447 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A    + MI+    P + +FTIL+T L K  +      L +++   G  P++   + +
Sbjct: 249 DSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTV 308

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LCK G    A+ +   + R    PN VT N LI+GLC   RI EA +L+ ++    C
Sbjct: 309 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGC 368

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+++T+N+LI+GLC++     A +LF + + E G +   + VTY+++  G    G +  
Sbjct: 369 APDIITYNSLIDGLCKSFQVDEAFQLF-QTIPESG-VSAANAVTYSTLFHGYAALGRMAD 426

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +   + D+  +P++ TY SLI  +C      E   L  EM   G  P V T +A++ 
Sbjct: 427 ACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLG 486

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              +    ++  +L + M  RG   D + YN +++G     +  +A  +   ++ K  R 
Sbjct: 487 GLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRK 546

Query: 363 ---DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
                 + + L+ + C+  K +DA  L  +M       +V +YN LLSGL ++    +A 
Sbjct: 547 FNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEAT 606

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           ++ + M      P+  T    I  LC    V +A ++ Q +    C   IET N LI G 
Sbjct: 607 QVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGY 666

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVT 506
           CK GR   A KL   +   G  P+  T
Sbjct: 667 CKSGRADLARKLLEEMTEAGLEPNDTT 693



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 194/376 (51%), Gaps = 12/376 (3%)

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           NVF+C       N  ++ LCR      AL LF    N    IC P+  TY  +I G    
Sbjct: 21  NVFSC-------NCALDMLCRLNRRQEALALFR---NAMARICMPNKFTYGILIRGFSSA 70

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G +D A +LL +MK      N + + +L+ G C      EA   F  M  +   PDV+T+
Sbjct: 71  GDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTY 129

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
            A+++  CK GK D+   +L  M+ +G  PDTVT+++L+DG C  G   +A  +   ++ 
Sbjct: 130 TALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQ 189

Query: 358 KGCRHDVYSYNILINANC-KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           +G  +   ++  +I   C K   VE A  +   ++++   P+V+ +N +++G  +  +L 
Sbjct: 190 RGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLD 249

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A KL++ M     VP+ FTF   I GLCK   V EA Q+ + +    C   + TY+ +I
Sbjct: 250 SAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVI 309

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           NGLCK G++  A +LF  ++ +   P+VVT + +I  LCK  ++++A  L   M    C 
Sbjct: 310 NGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCA 369

Query: 537 PSEVTFCTLLRGFVQN 552
           P  +T+ +L+ G  ++
Sbjct: 370 PDIITYNSLIDGLCKS 385



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 179/383 (46%), Gaps = 38/383 (9%)

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           +  NV + N  +   C ++  +EA  LF   M     P+  T+  +I      G +D   
Sbjct: 18  VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAI 77

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           +LLE M   G   + V + +LM G C  GR+  A E F +M +K C  DV +Y  L++A 
Sbjct: 78  QLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHAL 136

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI-DKMQ------- 426
           CK  K ++A  + REM+++   P  +T++TL+ GL + G+   A +++ D +Q       
Sbjct: 137 CKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSD 196

Query: 427 -----------------------LNDVVPDSFT-----FATYIDGLCKNGFVLEAVQVFQ 458
                                  L  V+   FT     F   I+G CK   +  A ++ +
Sbjct: 197 AAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLE 256

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +    C   + T+  LI GLCK  R+  A +L  ++   G  P+VVT ST+I+ LCK+G
Sbjct: 257 VMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQG 316

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
           Q+D A +L   ME +NC P+ VT   L+ G  +  +  +   L H+M  E     D+   
Sbjct: 317 QVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM-RETGCAPDIITY 375

Query: 579 SKVVDLLSKDKKYRECLNQFRHL 601
           + ++D L K  +  E    F+ +
Sbjct: 376 NSLIDGLCKSFQVDEAFQLFQTI 398



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 172/391 (43%), Gaps = 38/391 (9%)

Query: 51  LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +N   K G +  ++A   F  M +    P + +  IL+  L K K+ +    L+ R+   
Sbjct: 309 INGLCKQGQV--DDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRET 366

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP-NTVTFNFLINGLCAEGRIME 169
           G  PD+   N LI+ LCK      AF +   I  S  +  N VT++ L +G  A GR+ +
Sbjct: 367 GCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMAD 426

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL--------VALKLFEEMVNEFGAI-- 219
           A R+F  L      P++ T+ +LI   C+T   +        +A K F   VN   A+  
Sbjct: 427 ACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLG 486

Query: 220 ----------------------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQM---KDRN 254
                                 C  D + YN +++G+ +    DKA  +L Q+   +DR 
Sbjct: 487 GLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRK 546

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
            NP+    ++L+   C V    +AK L  +M + G    V ++N +++   +  + D+  
Sbjct: 547 FNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEAT 606

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           ++ E M+  G  P+  T N ++   C   ++  A EL   M   GC  D+ + N LI   
Sbjct: 607 QVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGY 666

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
           CK  + + A  L  EM    + P+  T++ L
Sbjct: 667 CKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 104/197 (52%), Gaps = 1/197 (0%)

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF         H+V+S N  ++  C+  + ++A+ L+R  ++    P+  TY  L+ G  
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
             G+L  A++L+++M+ +    ++    T + GLC  G V+EA++ F+A+    C   + 
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVM 127

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  L++ LCK G+   A  +   +  +G  PD VT ST+I  LCK G  ++A  +L D+
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 531 EAKNCVPSEVTFCTLLR 547
             +    S+  F T+++
Sbjct: 188 IQRGMGNSDAAFETIIQ 204



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 1/204 (0%)

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           V L+ +    R+  +V + N  L  L ++    +AL L         +P+ FT+   I G
Sbjct: 7   VLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRG 66

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
               G +  A+Q+ + +++   E     +  L+ GLC  GR+  A + F R   K   PD
Sbjct: 67  FSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHF-RAMAKDCAPD 125

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           V+T + ++H LCK G+ D+A  +L +M A+ C P  VTF TL+ G  +   + +   +L 
Sbjct: 126 VMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLE 185

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSK 587
            +    +  SD +  + +  L +K
Sbjct: 186 DVIQRGMGNSDAAFETIIQRLCNK 209



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 7/214 (3%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL---NSNGLF 113
            GN T   A+  FD M     +     + +++  +A+  ++D  +++ +++         
Sbjct: 490 EGNHT-ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFN 548

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P    ++ L+  LC++G T  A  +L ++    F     ++N L++GL    R  EA ++
Sbjct: 549 PSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQV 608

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           F+ +      P + T N +I+ LC       A +L + M ++ G  C PD+ T N++I G
Sbjct: 609 FEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRM-SKLG--CCPDIETCNTLIGG 665

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
            CK G  D A++LL +M +  + PN  T++ L C
Sbjct: 666 YCKSGRADLARKLLEEMTEAGLEPNDTTHDLLEC 699


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 156/526 (29%), Positives = 274/526 (52%), Gaps = 11/526 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+     P   ++  L+   + +  +   V +FK ++S+ L PD+   N  +  LCK G 
Sbjct: 214 MVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGR 273

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD---PNVVT 188
              A  +   ++     P+ +++  L++G    G I     LF   NV  C+   P+   
Sbjct: 274 IKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLF---NVMVCEGVVPDRHV 330

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FNTLIN   R      +L +FE+M  +      PD++T++++I   C+ G +D A E   
Sbjct: 331 FNTLINAYARLGMMDKSLLMFEDMTKQG---VNPDIITFSTVISAFCRLGRLDDAMEKFN 387

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF-NAMINYNCKD 307
            M D  + P+   Y+ LI G C   D  +AK L  +M+  G+ P  + F  ++IN  CK+
Sbjct: 388 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKE 447

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G++ +   +++L+I  G  P+ +T+NSL+DG+CLVG +  A  L  SM S G   D+Y+Y
Sbjct: 448 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 507

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N L++  CK  +++DA+ L+R+ML +R+  + ++YN +L GLFQ      A ++  +M  
Sbjct: 508 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 567

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + +     T+AT + GLC+N    EA  + + + +   +  I T+N +I  + K+GR + 
Sbjct: 568 SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQE 627

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A +LF  +   G +P ++T   MI  L KE   + A++L   ME  +C P       ++R
Sbjct: 628 AKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIR 687

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             +   + +K    L K+  +K ++ + + +S ++ L S + KYRE
Sbjct: 688 MLLNKGEVAKAGNYLSKI-DKKGILPEATTTSLLIYLFSVNGKYRE 732



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 170/631 (26%), Positives = 298/631 (47%), Gaps = 86/631 (13%)

Query: 53  DRHKSGNITSNEAVYFFDCMIKMKPSPGMT-SFTILLTMLAKNKQYDT-------VVSLF 104
           +R +SG +  ++A + FD ++  + +P        LL+ LA+              V LF
Sbjct: 44  ERLRSGTLGPDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELF 103

Query: 105 KRLNS---NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           KR++        P ++  N+LINC  +         V GR+LR+   P+  ++N LI+G 
Sbjct: 104 KRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGF 163

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
             EG + +A  LF K+      PNVVT+++LINGLC+T+    A ++  +MV   GA  +
Sbjct: 164 SKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV---GAGVR 220

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+ +TYN +I G    G   ++  +  +M    + P+V   NS +   C     KEA+ +
Sbjct: 221 PNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDI 280

Query: 282 FIEMMDNGVQPDVVT-----------------------------------FNAMINYNCK 306
           F  M+  G +PDV++                                   FN +IN   +
Sbjct: 281 FDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYAR 340

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G MDK   + E M ++GVNPD +T+++++  FC +GR+  A E F  M+  G   D   
Sbjct: 341 LGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAV 400

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERI------------------------------- 395
           Y+ LI   C  + +  A  L  +MLS+ I                               
Sbjct: 401 YSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLI 460

Query: 396 -----RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
                RP++IT+N+L+ G   VGN+ +A+ L+D M+   V PD +T+ T +DG CK+G +
Sbjct: 461 IHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRI 520

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            +A+ +F+ + + +  L   +YN +++GL +  R   A ++FH +   G    + T +T+
Sbjct: 521 DDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATV 580

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           +  LC+    D+AN LL  + + N     +TF  ++R   +  ++ +   L   ++   L
Sbjct: 581 LGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGL 640

Query: 571 VVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           V + L+    + +L+ K++ + +  N F  +
Sbjct: 641 VPTILTYRVMITNLI-KEESFEDADNLFSSM 670



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 136/276 (49%), Gaps = 1/276 (0%)

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P   TYN L++ +    R      +F  ++  G   DV+SYN LI+   K+ +V+ A  L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + +M  + I P+V+TY++L++GL +   +  A +++ +M    V P++ T+   I G   
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           +G   E+V+VF+ + +      +   N  +  LCK GR+K A  +F  +  KGP PDV++
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              ++H     G +   ++L   M  +  VP    F TL+  + +     K +++   M 
Sbjct: 296 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 355

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +  V  D+   S V+    +  +  + + +F H++
Sbjct: 356 KQG-VNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 390



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 5/229 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  ++A+  F  M+  + +    S+ I+L  L + ++      +F  +  +G+   
Sbjct: 516 KHGRI--DDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVS 573

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     ++  LC+   T  A ++L ++       + +TFN +I  +   GR  EA  LF 
Sbjct: 574 IHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFA 633

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            ++ +   P ++T+  +I  L +  +   A  LF  M     + C PD    N II  L 
Sbjct: 634 AISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEK---SSCTPDSRILNEIIRMLL 690

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
             G V KA   L ++  + I P   T + LI  F     ++E   L  E
Sbjct: 691 NKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 168/566 (29%), Positives = 270/566 (47%), Gaps = 78/566 (13%)

Query: 76  KPSPGMTSFT--ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
           KP     ++T  +LL    K K+++    L K       FP+  +   +IN  CK G   
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            AF +L  +       + +  + LI GLC +GRI EA   FK +    C PNV+T+NT++
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVV 187

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAI--CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           NGLC+      AL+LF++M   + A   C+PDV++Y+++ID LCK   VDKA E   +M+
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR 247

Query: 252 DRNINPNVITYNSLICGFCCVD----------------------------------DWKE 277
                PNV+TY+SLI G C VD                                  D +E
Sbjct: 248 AVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQE 307

Query: 278 AKCLFIE-MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
             C F E ++ +G +P+VVT+N  ++  CK G++D+  R+L  M++  V PD +TY+S++
Sbjct: 308 KACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSII 367

Query: 337 DGFCLVGRISRARELFVSMVSKGC-RHDV------------------------------- 364
           DGFC  GR+ +A ++F  M+   C  H V                               
Sbjct: 368 DGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI 427

Query: 365 ---YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
               +YN+L++  C    VE A+ +Y +M  ++ +P   TY  L+  L +   + +A + 
Sbjct: 428 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEF 487

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +D M+ ++VVP+       ++ LCK G V EA  V   +    C+   ET+  L+  L  
Sbjct: 488 LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYL 547

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             + + A KL   L+  G + D  T S  +  +CK G+ D+A +++  M  K   P E T
Sbjct: 548 RKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGT 604

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +  +LR     ++    +    KMA+
Sbjct: 605 YVAVLRSLCGLDRVESAIAEFEKMAS 630



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 220/499 (44%), Gaps = 46/499 (9%)

Query: 63  NEAVYFFDCMIKMKPS-----PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           +EA+  FD M K   +     P + S++ ++  L K ++ D     FKR+ + G  P++ 
Sbjct: 197 DEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 256

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             + LI+ LCK+   S    +L  +    F  N + FN +++ L       +A + F++L
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 316

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 PNVVT+N  ++GLC+      A ++  EMV    +   PDV+TY+SIIDG CK 
Sbjct: 317 LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVE---SKVTPDVITYSSIIDGFCKA 373

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGF---------------------------- 269
           G +DKA ++  +M      P+ +T+ +L+ GF                            
Sbjct: 374 GRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTY 433

Query: 270 -------CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
                  C  D  + A  ++ +M     QPD  T+  +I   C+  ++D+    L++M  
Sbjct: 434 NVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEA 493

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
             V P+    ++L++  C  G +  A  +  ++V  GC+    ++ IL+      +K E 
Sbjct: 494 DNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEA 553

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L R   S        TY+  ++ + + G   +A+++I++M L  V PD  T+   + 
Sbjct: 554 ASKLLR---SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLR 610

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
            LC    V  A+  F+ + +  C   + TY  LI   C       A ++F  +   G  P
Sbjct: 611 SLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTP 670

Query: 503 DVVTCSTMIHWLCKEGQMD 521
              T  T+   L   G  D
Sbjct: 671 QAQTMRTLSSCLRDAGYQD 689



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 173/345 (50%), Gaps = 42/345 (12%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G Q +  T   ++N   K  + ++ +RLL+  ++    P+ + Y ++++GFC  G++ +A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            EL   M  +G + DV  ++ LI   C+  ++++A+  ++ M  E   P+VITYNT+++G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNG 189

Query: 409 LFQVGNLGDALKLIDKMQ-----LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           L +   + +AL+L D M+      +   PD  +++T ID LCK   V +A + F+ +R  
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 464 KCELRIETYNCLINGLCKMGR-----------------------------------LKTA 488
            C   + TY+ LI+GLCK+ R                                    + A
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           C+ F RL   G  P+VVT +  +H LCK G++D+A  +LL+M      P  +T+ +++ G
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           F +  +  K   +  +M   + +   ++  + ++   S+ KK RE
Sbjct: 370 FCKAGRMDKADDVFTRMMVHECIPHPVTFMT-LLHGFSEHKKSRE 413



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 135/241 (56%), Gaps = 6/241 (2%)

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G +H+ Y+  +L+NA  K ++ E+A  L +E L     P+ I Y T+++G  + G +  A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            +L+D+M+   V  D    +T I GLC+ G + EA++ F+++   +C   + TYN ++NG
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNG 189

Query: 479 LCKMGRLKTACKLFHRLQHK-----GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
           LCK  R+  A +LF  ++ +     G  PDV++ ST+I  LCK  ++DKA +    M A 
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            C P+ VT+ +L+ G  + ++ S+ + LL  M  +   ++ +  ++ +  L   D++ + 
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 594 C 594
           C
Sbjct: 310 C 310


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 270/553 (48%), Gaps = 43/553 (7%)

Query: 72  MIKMKPSPGMTSF-TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG 130
           +++  P  G  ++ T++  + A    +D    LF ++    +FP+L   N +++ LCK G
Sbjct: 145 LLRALPHRGAVAYCTVVCGLYAHGHTHDAR-QLFDQMLHTHVFPNLAAFNKVLHALCKRG 203

Query: 131 ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
               A ++LG++++   + N  T+N  I GLC  GR+ EA RL   +  +A  P+VVT+N
Sbjct: 204 DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYN 262

Query: 191 TLINGLCRTRNTLVALKLFEEMVNE------------FGAICK----------------- 221
           TLI GLC+      A+     M+N+                CK                 
Sbjct: 263 TLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK 322

Query: 222 ---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
              PD VTY S+I+GLC +G V++A EL  + + + I P+++ YNSL+ G C       A
Sbjct: 323 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 382

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             +  EM + G  PD+ T+N +IN  CK G +     ++   I +G  PD  T+N+L+DG
Sbjct: 383 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 442

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C   ++  A +L   M   G   D  +YN ++N  CK  KV +    ++EM+ +   P+
Sbjct: 443 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 502

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            ITYN L+    +   + +A K+I KM    + PD+ +F T I G C+NG +  A  +FQ
Sbjct: 503 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ 562

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +         +T+N LI        +  A K+F  +  KG   D  T   +I   CK  
Sbjct: 563 KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTA 622

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +D+A   L++M  K  +PS  TF  ++     N++  + V ++H M         + + 
Sbjct: 623 NVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV-------KIGVV 675

Query: 579 SKVVD-LLSKDKK 590
            +VVD +L+ DKK
Sbjct: 676 PEVVDTILNADKK 688



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 248/517 (47%), Gaps = 35/517 (6%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  F+ M      P   ++  ++  L     +D    ++ R+ + G+ PDL    + +
Sbjct: 71  DAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRL 130

Query: 124 NCLC-------------------------------KMGITSGAFVVLGRILRSCFTPNTV 152
              C                                 G T  A  +  ++L +   PN  
Sbjct: 131 RSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLA 190

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            FN +++ LC  G ++EA  L  K+       N+ T+N  I GLC       A++L + M
Sbjct: 191 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 250

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                A   PDVVTYN++I GLCK     +A   L +M ++   P+  TYN++I G+C +
Sbjct: 251 ----RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKI 306

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
              +EA  L  + +  G  PD VT+ ++IN  C +G +++   L      +G+ PD V Y
Sbjct: 307 SMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVY 366

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           NSL+ G CL G I  A ++   M  +GC  D+ +YNI+IN  CK   + DA  +  + + 
Sbjct: 367 NSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM 426

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           +   P V T+NTL+ G  +   L  AL+L+++M    + PD+ T+ + ++GLCK G V E
Sbjct: 427 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 486

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
             + FQ +    C     TYN LI   C+  +++ A K+  ++  +G  PD V+ +T+I+
Sbjct: 487 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 546

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
             C+ G ++ A  L   +E K    +  TF TL+  F
Sbjct: 547 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 583



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 236/501 (47%), Gaps = 66/501 (13%)

Query: 144 RSCFTPNTVTFNFL--INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           RS  +P T+   ++  I      GR+ +A   F+++++FAC P    +N +++ L     
Sbjct: 44  RSRLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAY 103

Query: 202 TLVALKLFEEM---------------VNEFGAICKPDV-------------VTYNSIIDG 233
              A K++  M               +  F    +P +             V Y +++ G
Sbjct: 104 HDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCG 163

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           L   G    A++L  QM   ++ PN+  +N ++   C   D  EA  L  +++  G+  +
Sbjct: 164 LYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSIN 223

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           + T+N  I   C+ G++ +  RL++ M    V PD VTYN+L+ G C       A     
Sbjct: 224 LFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLR 282

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+++GC  D ++YN +I+  CK   V++A  L ++ + +   P  +TY +L++GL   G
Sbjct: 283 RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG 342

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           ++  AL+L ++ Q   + PD   + + + GLC  G +L A+QV   +    C   I+TYN
Sbjct: 343 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 402

Query: 474 CLINGLCKMG-----------------------------------RLKTACKLFHRLQHK 498
            +INGLCKMG                                   +L +A +L  R+   
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 462

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PD +T +++++ LCK G++++ N+   +M  K C P+ +T+  L+  F ++NK  + 
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 522

Query: 559 VVLLHKMAAEKLVVSDLSLSS 579
             ++ KM+ E L    +S ++
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNT 543



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 204/430 (47%), Gaps = 39/430 (9%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV   D M +    P + ++  L+  L K       +   +R+ + G  PD F  N +I
Sbjct: 242 EAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 300

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK------- 176
           +  CK+ +   A  +L   +   F P+ VT+  LINGLCAEG +  A  LF +       
Sbjct: 301 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 360

Query: 177 -------------------------LNVFA---CDPNVVTFNTLINGLCRTRNTLVALKL 208
                                    +N  A   C P++ T+N +INGLC+  N   A  +
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 420

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             + + + G +  PDV T+N++IDG CK   +D A +L+ +M +  I P+ ITYNS++ G
Sbjct: 421 MNDAIMK-GYL--PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 477

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C      E    F EM+  G  P+ +T+N +I   C+  KM++ ++++  M Q G++PD
Sbjct: 478 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 537

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            V++N+L+ GFC  G +  A  LF  +  KG      ++N LI A      +  A  ++ 
Sbjct: 538 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFD 597

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EMLS+  R    TY  L+ G  +  N+  A   + +M     +P   TF   I+ L  N 
Sbjct: 598 EMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNH 657

Query: 449 FVLEAVQVFQ 458
            V +AV +  
Sbjct: 658 RVFQAVGIIH 667



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 5/218 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    LN   K+G +  NE    F  MI     P   ++ IL+    ++ + +    
Sbjct: 467 DTITYNSVLNGLCKAGKV--NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 524

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +  +++  GL PD    N LI   C+ G   GA+++  ++    ++    TFN LI    
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 584

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            +  +  A ++F ++       +  T+  LI+G C+T N   A     EM+ + G I  P
Sbjct: 585 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKK-GFI--P 641

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            + T+  +I+ L  +  V +A  ++  M    + P V+
Sbjct: 642 SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 154/470 (32%), Positives = 243/470 (51%), Gaps = 5/470 (1%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           +++F +L+  L K  Q    + + + + ++GL PD      L+    + G  +GA  +  
Sbjct: 158 VSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKK 217

Query: 141 RIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
           ++L   C   N V+   L+NG C EGR+ EA R   +++     P+ VTFN+L+NG CR 
Sbjct: 218 QMLGYGCLLTN-VSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRI 276

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
            N   AL + + M+ +      PDV TYNS+I G+CK G  +KA E+L QM  R  +PN 
Sbjct: 277 GNVNDALDIVDFMIEKG---FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNT 333

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TYN+LI   C  ++ + A  L   ++  G+ PDV TFN +I   C     D    + E 
Sbjct: 334 VTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEE 393

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M  +G  PD  TY+ L+D  C   R+  A  L   M S GC  +   YN LI+  CK ++
Sbjct: 394 MKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRR 453

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +EDA  ++ +M    +  S +TYNTL+ GL +   + +A +L+D+M +  + PD FT+ +
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNS 513

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +   C+ G + +A  + Q + +  CE  I TY  LI GLC+ GR+  A KL   +Q KG
Sbjct: 514 LLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKG 573

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +      + +I  L    +  +   L  +M  K+  P  +T   + RG 
Sbjct: 574 IVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGL 623



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 270/551 (49%), Gaps = 41/551 (7%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           LL  L ++  +D++ +L K+L S+G  P+      LI              +L   L   
Sbjct: 61  LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENEL--G 118

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F P+T  +N  +N L  + ++     L  K+       +V TFN LI  LC+      A+
Sbjct: 119 FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAI 178

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            + EEM N      KPD +T+ +++ G  ++G ++ A ++  QM         ++   L+
Sbjct: 179 LMLEEMANHG---LKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLV 235

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            GFC     +EA    +E+ + G  PD VTFN+++N  C+ G ++    +++ MI++G +
Sbjct: 236 NGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD 295

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD  TYNSL+ G C +G   +A E+   M+ + C  +  +YN LI+A CK+ ++E A  L
Sbjct: 296 PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDL 355

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            R ++S+ + P V T+NTL+ GL    N   A+++ ++M+     PD FT++  ID LC 
Sbjct: 356 ARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCY 415

Query: 447 NGFVLEAVQVFQAIRNCKC----------------ELRIE-------------------T 471
              + EA+ + + + +  C                  RIE                   T
Sbjct: 416 ERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVT 475

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN LI+GLCK  R++ A +L  ++  +G  PD  T ++++ + C+ G ++KA D++  M 
Sbjct: 476 YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA 535

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
           +  C P   T+ TL+ G  +  +      LL  +  + +V++  + +  V+  L   K+ 
Sbjct: 536 SNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNP-VIQALFMRKRT 594

Query: 592 RECLNQFRHLL 602
           +E +  FR ++
Sbjct: 595 KEGMRLFREMM 605



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 214/414 (51%), Gaps = 9/414 (2%)

Query: 35  DLSSHHFK-DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK 93
           ++S   F  D  +    +N   + GN+  N+A+   D MI+    P + ++  L++ + K
Sbjct: 253 EVSEEGFSPDQVTFNSLVNGFCRIGNV--NDALDIVDFMIEKGFDPDVYTYNSLISGMCK 310

Query: 94  NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS-CFTPNTV 152
             +++  + + +++      P+    N LI+ LCK      A   L RIL S    P+  
Sbjct: 311 LGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAA-TDLARILVSKGLLPDVC 369

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           TFN LI GLC       A  +F+++    C P+  T++ LI+ LC  R    AL L +EM
Sbjct: 370 TFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEM 429

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
            +   + C  + V YN++IDGLCK   ++ A+E+  QM+   ++ + +TYN+LI G C  
Sbjct: 430 ES---SGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKN 486

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
              +EA  L  +M+  G++PD  T+N+++ Y C+ G ++K   +++ M   G  PD  TY
Sbjct: 487 KRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTY 546

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
            +L+ G C  GR+  A +L  S+  KG     ++YN +I A    ++ ++ + L+REM+ 
Sbjct: 547 GTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMME 606

Query: 393 ERIRPSVITYNTLLSGLFQVGN-LGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           +   P  +T+  +  GL   G  + +A+    +M    ++P+  +F    +GLC
Sbjct: 607 KSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLC 660



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 98/205 (47%), Gaps = 9/205 (4%)

Query: 397 PSVITYN------TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           PS  T++      TLL  L Q  +      L+ +++ +  +P++ TFAT I        +
Sbjct: 47  PSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEI 106

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
              +++ +     K +     YN  +N L +  +LK    L  ++ ++G + DV T + +
Sbjct: 107 ENLLKILENELGFKPDTNF--YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVL 164

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           I  LCK  Q+  A  +L +M      P E+TF TL++GF++    +  + +  +M     
Sbjct: 165 IKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGC 224

Query: 571 VVSDLSLSSKVVDLLSKDKKYRECL 595
           +++++S+   +V+   K+ +  E L
Sbjct: 225 LLTNVSVKV-LVNGFCKEGRVEEAL 248


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 270/553 (48%), Gaps = 43/553 (7%)

Query: 72  MIKMKPSPGMTSF-TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG 130
           +++  P  G  ++ T++  + A    +D    LF ++    +FP+L   N +++ LCK G
Sbjct: 142 LLRALPHRGAVAYCTVVCGLYAHGHTHD-ARQLFDQMLHTHVFPNLAAFNKVLHALCKRG 200

Query: 131 ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
               A ++LG++++   + N  T+N  I GLC  GR+ EA RL   +  +A  P+VVT+N
Sbjct: 201 DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYN 259

Query: 191 TLINGLCRTRNTLVALKLFEEMVNE------------FGAICK----------------- 221
           TLI GLC+      A+     M+N+                CK                 
Sbjct: 260 TLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK 319

Query: 222 ---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
              PD VTY S+I+GLC +G V++A EL  + + + I P+++ YNSL+ G C       A
Sbjct: 320 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 379

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             +  EM + G  PD+ T+N +IN  CK G +     ++   I +G  PD  T+N+L+DG
Sbjct: 380 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 439

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C   ++  A +L   M   G   D  +YN ++N  CK  KV +    ++EM+ +   P+
Sbjct: 440 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 499

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            ITYN L+    +   + +A K+I KM    + PD+ +F T I G C+NG +  A  +FQ
Sbjct: 500 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ 559

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +         +T+N LI        +  A K+F  +  KG   D  T   +I   CK  
Sbjct: 560 KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTA 619

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +D+A   L++M  K  +PS  TF  ++     N++  + V ++H M         + + 
Sbjct: 620 NVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK-------IGVV 672

Query: 579 SKVVD-LLSKDKK 590
            +VVD +L+ DKK
Sbjct: 673 PEVVDTILNADKK 685



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 248/517 (47%), Gaps = 35/517 (6%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  F+ M      P   ++  ++  L     +D    ++ R+ + G+ PDL    + +
Sbjct: 68  DAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRL 127

Query: 124 NCLC-------------------------------KMGITSGAFVVLGRILRSCFTPNTV 152
              C                                 G T  A  +  ++L +   PN  
Sbjct: 128 RSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLA 187

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            FN +++ LC  G ++EA  L  K+       N+ T+N  I GLC       A++L + M
Sbjct: 188 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 247

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                A   PDVVTYN++I GLCK     +A   L +M ++   P+  TYN++I G+C +
Sbjct: 248 ----RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKI 303

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
              +EA  L  + +  G  PD VT+ ++IN  C +G +++   L      +G+ PD V Y
Sbjct: 304 SMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVY 363

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           NSL+ G CL G I  A ++   M  +GC  D+ +YNI+IN  CK   + DA  +  + + 
Sbjct: 364 NSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM 423

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           +   P V T+NTL+ G  +   L  AL+L+++M    + PD+ T+ + ++GLCK G V E
Sbjct: 424 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 483

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
             + FQ +    C     TYN LI   C+  +++ A K+  ++  +G  PD V+ +T+I+
Sbjct: 484 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 543

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
             C+ G ++ A  L   +E K    +  TF TL+  F
Sbjct: 544 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 580



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 232/492 (47%), Gaps = 66/492 (13%)

Query: 144 RSCFTPNTVTFNFL--INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           RS  +P T+   ++  I      GR+ +A   F+++++FAC P    +N +++ L     
Sbjct: 41  RSRLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAY 100

Query: 202 TLVALKLFEEM---------------VNEFGAICKPDV-------------VTYNSIIDG 233
              A K++  M               +  F    +P +             V Y +++ G
Sbjct: 101 HDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCG 160

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           L   G    A++L  QM   ++ PN+  +N ++   C   D  EA  L  +++  G+  +
Sbjct: 161 LYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSIN 220

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           + T+N  I   C+ G++ +  RL++ M    V PD VTYN+L+ G C       A     
Sbjct: 221 LFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLR 279

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+++GC  D ++YN +I+  CK   V++A  L ++ + +   P  +TY +L++GL   G
Sbjct: 280 RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG 339

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           ++  AL+L ++ Q   + PD   + + + GLC  G +L A+QV   +    C   I+TYN
Sbjct: 340 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 399

Query: 474 CLINGLCKMG-----------------------------------RLKTACKLFHRLQHK 498
            +INGLCKMG                                   +L +A +L  R+   
Sbjct: 400 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 459

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PD +T +++++ LCK G++++ N+   +M  K C P+ +T+  L+  F ++NK  + 
Sbjct: 460 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 519

Query: 559 VVLLHKMAAEKL 570
             ++ KM+ E L
Sbjct: 520 SKVIVKMSQEGL 531



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 203/433 (46%), Gaps = 45/433 (10%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV   D M +    P + ++  L+  L K       +   +R+ + G  PD F  N +I
Sbjct: 239 EAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 297

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK------- 176
           +  CK+ +   A  +L   +   F P+ VT+  LINGLCAEG +  A  LF +       
Sbjct: 298 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 357

Query: 177 -------------------------LNVFA---CDPNVVTFNTLINGLCRTRNTLVALKL 208
                                    +N  A   C P++ T+N +INGLC+  N   A  +
Sbjct: 358 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 417

Query: 209 FEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
             +      AI K   PDV T+N++IDG CK   +D A +L+ +M +  I P+ ITYNS+
Sbjct: 418 MND------AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + G C      E    F EM+  G  P+ +T+N +I   C+  KM++ ++++  M Q G+
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
           +PD V++N+L+ GFC  G +  A  LF  +  KG      ++N LI A      +  A  
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 591

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           ++ EMLS+  R    TY  L+ G  +  N+  A   + +M     +P   TF   I+ L 
Sbjct: 592 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651

Query: 446 KNGFVLEAVQVFQ 458
            N  V +AV +  
Sbjct: 652 VNHRVFQAVGIIH 664



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 5/218 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    LN   K+G +  NE    F  MI     P   ++ IL+    ++ + +    
Sbjct: 464 DTITYNSVLNGLCKAGKV--NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 521

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +  +++  GL PD    N LI   C+ G   GA+++  ++    ++    TFN LI    
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 581

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            +  +  A ++F ++       +  T+  LI+G C+T N   A     EM+ + G I  P
Sbjct: 582 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKK-GFI--P 638

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            + T+  +I+ L  +  V +A  ++  M    + P V+
Sbjct: 639 SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 156/526 (29%), Positives = 274/526 (52%), Gaps = 11/526 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+     P   ++  L+   + +  +   V +FK ++S+ L PD+   N  +  LCK G 
Sbjct: 285 MVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGR 344

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD---PNVVT 188
              A  +   ++     P+ +++  L++G    G I     LF   NV  C+   P+   
Sbjct: 345 IKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLF---NVMVCEGVVPDRHV 401

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FNTLIN   R      +L +FE+M  +      PD++T++++I   C+ G +D A E   
Sbjct: 402 FNTLINAYARLGMMDKSLLMFEDMTKQG---VNPDIITFSTVISAFCRLGRLDDAMEKFN 458

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF-NAMINYNCKD 307
            M D  + P+   Y+ LI G C   D  +AK L  +M+  G+ P  + F  ++IN  CK+
Sbjct: 459 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKE 518

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G++ +   +++L+I  G  P+ +T+NSL+DG+CLVG +  A  L  SM S G   D+Y+Y
Sbjct: 519 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 578

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N L++  CK  +++DA+ L+R+ML +R+  + ++YN +L GLFQ      A ++  +M  
Sbjct: 579 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 638

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + +     T+AT + GLC+N    EA  + + + +   +  I T+N +I  + K+GR + 
Sbjct: 639 SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQE 698

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A +LF  +   G +P ++T   MI  L KE   + A++L   ME  +C P       ++R
Sbjct: 699 AKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIR 758

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             +   + +K    L K+  +K ++ + + +S ++ L S + KYRE
Sbjct: 759 MLLNKGEVAKAGNYLSKI-DKKGILPEATTTSLLIYLFSVNGKYRE 803



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 170/631 (26%), Positives = 298/631 (47%), Gaps = 86/631 (13%)

Query: 53  DRHKSGNITSNEAVYFFDCMIKMKPSPGMT-SFTILLTMLAKNKQYDT-------VVSLF 104
           +R +SG +  ++A + FD ++  + +P        LL+ LA+              V LF
Sbjct: 115 ERLRSGTLGPDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELF 174

Query: 105 KRLNS---NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           KR++        P ++  N+LINC  +         V GR+LR+   P+  ++N LI+G 
Sbjct: 175 KRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGF 234

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
             EG + +A  LF K+      PNVVT+++LINGLC+T+    A ++  +MV   GA  +
Sbjct: 235 SKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV---GAGVR 291

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+ +TYN +I G    G   ++  +  +M    + P+V   NS +   C     KEA+ +
Sbjct: 292 PNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDI 351

Query: 282 FIEMMDNGVQPDVVT-----------------------------------FNAMINYNCK 306
           F  M+  G +PDV++                                   FN +IN   +
Sbjct: 352 FDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYAR 411

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G MDK   + E M ++GVNPD +T+++++  FC +GR+  A E F  M+  G   D   
Sbjct: 412 LGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAV 471

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERI------------------------------- 395
           Y+ LI   C  + +  A  L  +MLS+ I                               
Sbjct: 472 YSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLI 531

Query: 396 -----RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
                RP++IT+N+L+ G   VGN+ +A+ L+D M+   V PD +T+ T +DG CK+G +
Sbjct: 532 IHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRI 591

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            +A+ +F+ + + +  L   +YN +++GL +  R   A ++FH +   G    + T +T+
Sbjct: 592 DDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATV 651

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           +  LC+    D+AN LL  + + N     +TF  ++R   +  ++ +   L   ++   L
Sbjct: 652 LGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGL 711

Query: 571 VVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           V + L+    + +L+ K++ + +  N F  +
Sbjct: 712 VPTILTYRVMITNLI-KEESFEDADNLFSSM 741



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 136/276 (49%), Gaps = 1/276 (0%)

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P   TYN L++ +    R      +F  ++  G   DV+SYN LI+   K+ +V+ A  L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + +M  + I P+V+TY++L++GL +   +  A +++ +M    V P++ T+   I G   
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           +G   E+V+VF+ + +      +   N  +  LCK GR+K A  +F  +  KGP PDV++
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              ++H     G +   ++L   M  +  VP    F TL+  + +     K +++   M 
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +  V  D+   S V+    +  +  + + +F H++
Sbjct: 427 KQG-VNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 461



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 5/229 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  ++A+  F  M+  + +    S+ I+L  L + ++      +F  +  +G+   
Sbjct: 587 KHGRI--DDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVS 644

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     ++  LC+   T  A ++L ++       + +TFN +I  +   GR  EA  LF 
Sbjct: 645 IHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFA 704

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            ++ +   P ++T+  +I  L +  +   A  LF  M     + C PD    N II  L 
Sbjct: 705 AISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEK---SSCTPDSRILNEIIRMLL 761

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
             G V KA   L ++  + I P   T + LI  F     ++E   L  E
Sbjct: 762 NKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 155/514 (30%), Positives = 272/514 (52%), Gaps = 8/514 (1%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           L S+ F++ T + K LN   K+G    NE++YF +C++    +P +   T L+      K
Sbjct: 61  LQSYDFRE-THLMKLLNRSCKAGKF--NESLYFLECLVNKGYTPDVILCTKLIKGFFNFK 117

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
             +    + + L S+   PD+F  N +I+  CK+     A  VL R+    F P+ VT+N
Sbjct: 118 NIEKASRVMEILESH-TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYN 176

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I  LC   ++  A ++  +L +  C P V+T+  LI           A+KL EEM+  
Sbjct: 177 IMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR 236

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            G +  PD+ TYN+II G+CK+G V++A EL+  +  +   P+VI+YN L+  F     W
Sbjct: 237 -GLL--PDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKW 293

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            E + L  EM   G +P+ VT++ +I+  C+ G++D+   +L++MI++ + PDT +Y+ L
Sbjct: 294 DEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPL 353

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +   C  GR+  A  +   M+S GC  D+ +YN ++ A CK+     A+ ++ ++     
Sbjct: 354 ISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGC 413

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P+V +YNT++S L+  G+   AL ++  M    V PD  T+ + I  LC++G V EA+ 
Sbjct: 414 PPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIG 473

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +   +        + +YN ++ GLCK+ R+  A  +F  +  KG  P+  T   +I  + 
Sbjct: 474 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIG 533

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
             G   +A +L   + +++ + S+ +F  L + F
Sbjct: 534 FAGWRTEAMELANSLFSRDVI-SQDSFKRLNKTF 566



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 229/444 (51%), Gaps = 4/444 (0%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N  CK G  + +   L  ++   +TP+ +    LI G      I +A+R+ + L    
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +P+V  +N +I+G C+      A ++   M    G +  PD+VTYN +I  LC    + 
Sbjct: 134 -EPDVFAYNAVISGFCKVNRIEAATQVLNRM-KARGFL--PDIVTYNIMIGSLCNRRKLG 189

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A ++L Q+   N  P VITY  LI          EA  L  EM+  G+ PD+ T+NA+I
Sbjct: 190 LALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 249

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              CK+G +++   L+  +  +G  PD ++YN L+  F   G+     +L   M S+GC 
Sbjct: 250 RGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 309

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  +Y+ILI++ C+  ++++A+ + + M+ + + P   +Y+ L+S L + G L  A+ +
Sbjct: 310 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 369

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +D M  N  +PD   + T +  LCKNG   +A+++F  +R   C   + +YN +I+ L  
Sbjct: 370 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 429

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G    A  +   +  KG  PD +T +++I  LC++G +++A  LL DME     P+ ++
Sbjct: 430 CGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVIS 489

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
           +  +L G  +  +    + +  +M
Sbjct: 490 YNIVLLGLCKVRRIDDAIGMFAEM 513



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 201/404 (49%), Gaps = 5/404 (1%)

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+N  C+      +L   E +VN+      PDV+    +I G      ++KA  ++ ++ 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKG---YTPDVILCTKLIKGFFNFKNIEKASRVM-EIL 129

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           + +  P+V  YN++I GFC V+  + A  +   M   G  PD+VT+N MI   C   K+ 
Sbjct: 130 ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 189

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
              ++L+ ++     P  +TY  L++   + G I+ A +L   M+++G   D+Y+YN +I
Sbjct: 190 LALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 249

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              CK+  VE A  L   + S+  +P VI+YN LL      G   +  KL+ +M      
Sbjct: 250 RGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 309

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  T++  I  LC+ G + EA+ V + +   +      +Y+ LI+ LCK GRL  A  +
Sbjct: 310 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 369

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              +   G +PD+V  +T++  LCK G  ++A ++   +    C P+  ++ T++     
Sbjct: 370 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 429

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
              +S+ + ++  M ++ +   +++ +S ++  L +D    E +
Sbjct: 430 CGDRSRALGMVPAMISKGVDPDEITYNS-LISCLCRDGLVEEAI 472


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 257/485 (52%), Gaps = 8/485 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS--- 133
           P      F +++  L++       ++L    N +G  P +   N +++ L +   ++   
Sbjct: 128 PFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRD 187

Query: 134 --GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  V   ++R+  +PN  T+N +I G+ ++G + +     +K+      PNVVT+NT
Sbjct: 188 YDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+  C+ +    A+ L   M    G +   ++++YNS+I+GLC  G + +  EL+ +M+
Sbjct: 248 LIDASCKKKKVKEAMALLRAMA--VGGVAA-NLISYNSVINGLCGKGRMSEVGELVEEMR 304

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + + P+ +TYN+L+ GFC   +  +   L  EM+  G+ P+VVT+  +IN  CK G + 
Sbjct: 305 GKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLS 364

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   + + M  RG+ P+  TY +L+DGFC  G ++ A ++   M+  G    V +YN L+
Sbjct: 365 RAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALV 424

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  C   +V++AV + R M+   + P V++Y+T+++G  +   LG A ++ ++M    V+
Sbjct: 425 HGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVL 484

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD+ T+++ I GLC    ++EA  +F+ +          TY  LIN  C  G L  A +L
Sbjct: 485 PDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRL 544

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              +  +G +PD VT S +I+ L K+ +   A  LLL +  +  VP +VT+ TL+     
Sbjct: 545 HDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSN 604

Query: 552 NNKKS 556
           N  KS
Sbjct: 605 NEFKS 609



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 261/528 (49%), Gaps = 20/528 (3%)

Query: 54  RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
           R  S +   ++A   F  M++   SP + ++ +++  +      +  +   +++   G+ 
Sbjct: 180 RSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGIS 239

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P++   N LI+  CK      A  +L  +       N +++N +INGLC +GR+ E   L
Sbjct: 240 PNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGEL 299

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            +++      P+ VT+NTL+NG C+  N    L L  EMV   G    P+VVTY ++I+ 
Sbjct: 300 VEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMV---GKGLSPNVVTYTTLINC 356

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           +CK G + +A E+  QM+ R + PN  TY +LI GFC      EA  +  EM+ +G  P 
Sbjct: 357 MCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPS 416

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VVT+NA+++  C  G++ +   +L  M++RG+ PD V+Y++++ GFC    + +A ++  
Sbjct: 417 VVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKE 476

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            MV KG   D  +Y+ LI   C  QK+ +A  L+REM+   + P  +TY +L++     G
Sbjct: 477 EMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDG 536

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG----------------FVLEAVQVF 457
            L  AL+L D+M     +PD+ T++  I+GL K                   V + V   
Sbjct: 537 ELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYN 596

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             I NC      ++   L+ G C  G +  A ++F  +  +   P+    + MIH   + 
Sbjct: 597 TLIENCSNN-EFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRG 655

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           G + KA +L +++E  +     V    L++   +     ++  LL  +
Sbjct: 656 GNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNI 703



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 256/522 (49%), Gaps = 57/522 (10%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F   M K   SP + ++  L+    K K+    ++L + +   G+  +L   N +IN LC
Sbjct: 229 FMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLC 288

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
             G  S    ++  +      P+ VT+N L+NG C EG + +   L  ++      PNVV
Sbjct: 289 GKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVV 348

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+ TLIN +C+  N   A+++F++M        +P+  TY ++IDG C+ G +++A ++L
Sbjct: 349 TYTTLINCMCKAGNLSRAVEIFDQMRVRG---LRPNERTYTTLIDGFCQKGLMNEAYKVL 405

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M     +P+V+TYN+L+ G+C +   +EA  +   M++ G+ PDVV+++ +I   C++
Sbjct: 406 SEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRE 465

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            ++ K  ++ E M+++GV PDTVTY+SL+ G CL  ++  A +LF  M+ +G   D  +Y
Sbjct: 466 RELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             LINA C D ++  A+ L+ EM+     P  +TY+ L++GL +      A +L+ K+  
Sbjct: 526 TSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFY 585

Query: 428 NDVVPDSFTFATYID---------------GLCKNGFVLEAVQVFQAI--RNCKCELRIE 470
            + VPD  T+ T I+               G C  G + EA +VF+ +  RN K    I 
Sbjct: 586 EESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAI- 644

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC--------------- 515
            YN +I+G  + G +  A  L+  L+H       V    ++  L                
Sbjct: 645 -YNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNI 703

Query: 516 --------------------KEGQMDKANDLLLDMEAKNCVP 537
                               KEG MD   ++L +M     +P
Sbjct: 704 LRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLP 745



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 208/396 (52%), Gaps = 8/396 (2%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF-----VDKA 243
           F+ ++  L R      AL L   + N  G    P V++YN+++D L +         D A
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLH-LANRHG--FAPTVLSYNAVLDALLRRSSSNHRDYDDA 191

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           + +   M    ++PNV TYN +I G     D ++      +M   G+ P+VVT+N +I+ 
Sbjct: 192 ERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDA 251

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           +CK  K+ +   LL  M   GV  + ++YNS+++G C  GR+S   EL   M  KG   D
Sbjct: 252 SCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPD 311

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN L+N  CK+  +   + L  EM+ + + P+V+TY TL++ + + GNL  A+++ D
Sbjct: 312 EVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFD 371

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M++  + P+  T+ T IDG C+ G + EA +V   +        + TYN L++G C +G
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLG 431

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R++ A  +   +  +G  PDVV+ ST+I   C+E ++ KA  +  +M  K  +P  VT+ 
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYS 491

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +L++G     K  +   L  +M    L   +++ +S
Sbjct: 492 SLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTS 527



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 5/248 (2%)

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA-----NCKDQKVED 382
            +  ++ ++     +G + +A  L       G    V SYN +++A     +   +  +D
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDD 190

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  ++R+M+   + P+V TYN ++ G+   G+L   L  + KM+   + P+  T+ T ID
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
             CK   V EA+ + +A+        + +YN +INGLC  GR+    +L   ++ KG +P
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D VT +T+++  CKEG + +   LL +M  K   P+ VT+ TL+    +    S+ V + 
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370

Query: 563 HKMAAEKL 570
            +M    L
Sbjct: 371 DQMRVRGL 378


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 254/490 (51%), Gaps = 11/490 (2%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           ++L    +   + + V   + L++ G   D    NL+++ +C+ G       +L ++   
Sbjct: 148 VILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSF 207

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
              P+ V++N ++ GLC   R  +   L  ++    C PNV TFNTLI  LCR       
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRN------ 261

Query: 206 LKLFEEMVNEFGAI----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
             LFE++      +    C PD+  Y +IIDG+CKDG  + A ++L +M    + PNV+ 
Sbjct: 262 -GLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVC 320

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           YN+++ G C  + W+EA+ L  EM       D VTFN ++++ C++G +D+V  LLE M+
Sbjct: 321 YNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 380

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           + G  PD +TY ++++GFC  G +  A  L  +M + GC+ +  SY I++   C+ ++  
Sbjct: 381 EHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWV 440

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           DA  L   M+ +   P+ +T+NTL++ + + G +  A++L+ +M +N   PD  +++T I
Sbjct: 441 DAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 500

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGL K G   EA+++   + N         Y+ + + L + GR     ++F  +Q     
Sbjct: 501 DGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVR 560

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            D    + +I  LCK  + D+A D    M +  C+P+E T+  L+RG        +   L
Sbjct: 561 SDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDL 620

Query: 562 LHKMAAEKLV 571
           L ++ + + V
Sbjct: 621 LSELCSRRAV 630



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 247/497 (49%), Gaps = 13/497 (2%)

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
           + L++ G    +   N +I   C+ G  + A  +   +      PN  T+  ++  LCA 
Sbjct: 65  RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCAR 121

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT---RNTLVALKLFEEMVNEFGAICK 221
           G I +A  +  ++ +  C       + ++   CR    R+ + AL++           C 
Sbjct: 122 GLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH------AKGCT 175

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
            D    N ++  +C+ G VD+  ELL ++      P++++YN+++ G C    W + + L
Sbjct: 176 LDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEEL 235

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
            +EM+  G  P+V TFN +I Y C++G  ++V+  L  M + G  PD   Y +++DG C 
Sbjct: 236 MVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICK 295

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G    A ++   M S G + +V  YN ++   C  ++ E+A  L  EM  E      +T
Sbjct: 296 DGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVT 355

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +N L+    Q G +   ++L+++M  +  +PD  T+ T I+G CK G V EAV + + + 
Sbjct: 356 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 415

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
            C C+    +Y  ++ GLC+  R   A +L   +  +G +P+ VT +T+I+++CK+G ++
Sbjct: 416 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVE 475

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A +LL  M    C P  +++ T++ G  +  K  + + LL+ M   K +  +  + S +
Sbjct: 476 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM-INKGITPNTIIYSSM 534

Query: 582 VDLLSKDKKYRECLNQF 598
              LS++ +  + +  F
Sbjct: 535 ASALSREGRTDKIIQMF 551



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 197/382 (51%), Gaps = 3/382 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+++   P + +F  L+  L +N  ++ V     ++  +G  PDL +   +I+ +CK G 
Sbjct: 239 MVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGH 298

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L R+      PN V +N ++ GLC+  R  EA  L  ++    C  + VTFN 
Sbjct: 299 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNI 358

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++  C+       ++L E+M+ E G  C PDV+TY ++I+G CK+G VD+A  LL  M 
Sbjct: 359 LVDFFCQNGLVDRVIELLEQML-EHG--CIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 415

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                PN I+Y  ++ G C  + W +A+ L   M+  G  P+ VTFN +IN+ CK G ++
Sbjct: 416 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVE 475

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL+ M+  G +PD ++Y++++DG    G+   A EL   M++KG   +   Y+ + 
Sbjct: 476 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMA 535

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +A  ++ + +  + ++  +    +R     YN ++S L +      A+     M  N  +
Sbjct: 536 SALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCM 595

Query: 432 PDSFTFATYIDGLCKNGFVLEA 453
           P+  T+   I GL   G V EA
Sbjct: 596 PNESTYTILIRGLASEGLVREA 617



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 204/417 (48%), Gaps = 3/417 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+  +L  L   K++D V  L   +   G  P++   N LI  LC+ G+       
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEA 270

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L ++     TP+   +  +I+G+C +G    A  +  ++  +   PNVV +NT++ GLC 
Sbjct: 271 LSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCS 330

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  L  EM  E    C  D VT+N ++D  C++G VD+  ELL QM +    P+
Sbjct: 331 AERWEEAEDLLAEMFQED---CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 387

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           VITY ++I GFC      EA  L   M   G +P+ +++  ++   C+  +      L+ 
Sbjct: 388 VITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELIS 447

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MIQ+G  P+ VT+N+L++  C  G + +A EL   M+  GC  D+ SY+ +I+   K  
Sbjct: 448 HMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 507

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K E+A+ L   M+++ I P+ I Y+++ S L + G     +++ D +Q   V  D+  + 
Sbjct: 508 KTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYN 567

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
             I  LCK      A+  F  + +  C     TY  LI GL   G ++ A  L   L
Sbjct: 568 AVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 3/223 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV     M      P   S+TI+L  L + +++     L   +   G  P+    N L
Sbjct: 405 DEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTL 464

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN +CK G+   A  +L ++L +  +P+ ++++ +I+GL   G+  EA  L   +     
Sbjct: 465 INFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 524

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN + ++++ + L R   T   +++F+ + +   A  + D   YN++I  LCK    D+
Sbjct: 525 TPNTIIYSSMASALSREGRTDKIIQMFDSIQD---ATVRSDAALYNAVISSLCKRWETDR 581

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           A +    M      PN  TY  LI G       +EA+ L  E+
Sbjct: 582 AIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 2/135 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  ++   K+G   + EA+   + MI    +P    ++ + + L++  + D ++ 
Sbjct: 492 DLISYSTVIDGLGKAGK--TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQ 549

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +    +  D  + N +I+ LCK   T  A      ++ +   PN  T+  LI GL 
Sbjct: 550 MFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLA 609

Query: 163 AEGRIMEAARLFKKL 177
           +EG + EA  L  +L
Sbjct: 610 SEGLVREAQDLLSEL 624


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 266/518 (51%), Gaps = 5/518 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA  F + M K +  P + ++ +L+  L K +++D    + K ++  G  P+  V N L
Sbjct: 249 DEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTL 308

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C++G  S A  +   ++ +  +PN+VT N LI G C   ++  A  L +++     
Sbjct: 309 IDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGG 368

Query: 183 DPNVVTFNTLINGLC-RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             N  TF ++I+ LC + R     L + E ++  F    KP+      ++ GLC++G   
Sbjct: 369 VINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNF----KPNDGLLTLLVSGLCQNGKQS 424

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A EL  ++ ++    N +T N+LI G C     +EA  L  EM++ G+  D +++N +I
Sbjct: 425 EAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLI 484

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              CK+GK+++  +L E M++RG+ PD  TYN L+ G C +G+I  A  L+      G  
Sbjct: 485 LACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNF 544

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D Y+Y I+I+  CK  +VE+   L++EM++ +I  + + Y TL+    + GN+ +A +L
Sbjct: 545 PDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRL 604

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            D M+   +   S T+++ I GL   G V  A Q+   +R       +  Y  LI G CK
Sbjct: 605 RDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCK 664

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
           +G++     +   +      P+ +T + MI+  CK G M  A  LL +M  K  VP  VT
Sbjct: 665 LGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVT 724

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +  L  GF +  K  + + +   M+   + + D++ ++
Sbjct: 725 YNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTT 762



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 251/498 (50%), Gaps = 3/498 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD M     +P +  F+ ++       + D  + LF+++   G+ P++   N +I+ LCK
Sbjct: 185 FDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCK 244

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    AF    ++ +    P+ VT+  LINGL    R  EA  + K+++     PN V 
Sbjct: 245 NGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVV 304

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +NTLI+G CR  N   AL++ ++M++       P+ VT NS+I G CK   ++ A+ LL 
Sbjct: 305 YNTLIDGYCRIGNISTALQIRDDMISNG---ISPNSVTCNSLIQGYCKSNQMEHAEHLLE 361

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M       N  T+ S+I   C    +  A    +EM+    +P+      +++  C++G
Sbjct: 362 EMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNG 421

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           K  +   L   ++++G   +TVT N+L+ G C  G    A +L   M+ +G   D  SYN
Sbjct: 422 KQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYN 481

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI A CK+ KVE+   L  EM+   I+P + TYN LL GL  +G + +A  L  + + N
Sbjct: 482 TLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKN 541

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
              PD++T+   IDG CK   V E  ++FQ +   K E     Y  LI   C+ G ++ A
Sbjct: 542 GNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREA 601

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +L   ++ +G      T S++IH L   G +D AN LL +M  +   P+ V +  L+ G
Sbjct: 602 FRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGG 661

Query: 549 FVQNNKKSKVVVLLHKMA 566
           + +  +  KV  +L +M+
Sbjct: 662 YCKLGQMHKVDSILQEMS 679



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 232/471 (49%), Gaps = 38/471 (8%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+  T NFL++ L     +  + ++F  +      P+V  F+T++N  C       A++L
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F +M  + G    P+VVTYN+II GLCK+G +D+A +   +M+   + P+++TY  LI G
Sbjct: 220 FRKM-EKVGV--APNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLING 276

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
              ++ + EA C+  EM D G  P+ V +N +I+  C+ G +    ++ + MI  G++P+
Sbjct: 277 LVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPN 336

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKG------------------CRHDV------ 364
           +VT NSL+ G+C   ++  A  L   M++ G                  CR D       
Sbjct: 337 SVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIM 396

Query: 365 ------YSYN-----ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
                 +  N     +L++  C++ K  +A+ L+  +L +    + +T N L+ GL + G
Sbjct: 397 EMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAG 456

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           +  +A KL+ +M    +V DS ++ T I   CK G V E  ++ + +     +  + TYN
Sbjct: 457 SKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYN 516

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            L++GLC MG+++ A  L+H  +  G  PD  T   MI   CK  ++++   L  +M   
Sbjct: 517 MLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTM 576

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
               + V + TL+R + +N    +   L   M +  +  +  + SS +  L
Sbjct: 577 KIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGL 627



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 204/399 (51%), Gaps = 3/399 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +FT ++  L    ++D+ +     +      P+  +L LL++ LC+ G  S A  +  R+
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L   F  NTVT N LI+GLC  G   EAA+L K++       + +++NTLI   C+    
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV 493

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
               KL EEMV       +PD+ TYN ++ GLC  G +++A  L  + K     P+  TY
Sbjct: 494 EEGFKLKEEMVRRG---IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTY 550

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             +I G+C  +  +E + LF EM+   ++ + V +  +I   C++G M +  RL + M  
Sbjct: 551 GIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRS 610

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RG+   + TY+SL+ G   +G +  A +L   M  +G   +V  Y  LI   CK  ++  
Sbjct: 611 RGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHK 670

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
              + +EM    + P+ ITY  +++G  ++GN+  A KL+++M    +VPD+ T+    +
Sbjct: 671 VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTN 730

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           G CK G + EA++V   +      L   TY  LI+G  K
Sbjct: 731 GFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 166/337 (49%), Gaps = 35/337 (10%)

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           EL   + ++ + P++ T N L+      ++ K +  +F  M   GV PDV  F+ M+N  
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  G++D    L   M + GV P+ VTYN+++ G C  GR+  A +    M  +  +  +
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y +LIN   K ++ ++A C+ +EM      P+ + YNTL+ G  ++GN+  AL++ D 
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-----------------RNC-KC- 465
           M  N + P+S T  + I G CK+  +  A  + + +                 R C KC 
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387

Query: 466 ---------ELRIETY-------NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
                    E+ +  +         L++GLC+ G+   A +L++RL  KG   + VT + 
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNA 447

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           +IH LC+ G  ++A  LL +M  +  V   +++ TL+
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLI 484



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 133/268 (49%), Gaps = 3/268 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P M ++ +LL  L    + +    L+     NG FPD +   ++I+  CK   
Sbjct: 503 MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANR 562

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
                 +   ++      N V +  LI   C  G + EA RL   +          T+++
Sbjct: 563 VEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSS 622

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+GL        A +L +EM  E      P+VV Y ++I G CK G + K   +L +M 
Sbjct: 623 LIHGLSNIGLVDSANQLLDEMRKEG---LSPNVVCYTALIGGYCKLGQMHKVDSILQEMS 679

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             N++PN ITY  +I G C + + K A  L  EM   G+ PD VT+NA+ N  CK+GKM+
Sbjct: 680 INNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKME 739

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGF 339
           +  ++ +LM   G++ D +TY +L+DG+
Sbjct: 740 EALKVCDLMSTGGISLDDITYTTLIDGW 767



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 166/322 (51%), Gaps = 1/322 (0%)

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF  + + G+ P + T N +++   K  ++    ++ ++M   GV PD   ++++++ FC
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFC 208

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GR+  A ELF  M   G   +V +YN +I+  CK+ ++++A     +M  ER++PS++
Sbjct: 209 TGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLV 268

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TY  L++GL ++    +A  ++ +M      P++  + T IDG C+ G +  A+Q+   +
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            +        T N LI G CK  +++ A  L   +   G + +  T +++IH LC + + 
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRF 388

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           D A   +++M  +N  P++     L+ G  QN K+S+ + L +++  EK   ++   S+ 
Sbjct: 389 DSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL-LEKGFAANTVTSNA 447

Query: 581 VVDLLSKDKKYRECLNQFRHLL 602
           ++  L +     E     + +L
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEML 469



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 142/290 (48%), Gaps = 1/290 (0%)

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
           V  L  L+  +G+ P   T N L+        +  + ++F  M   G   DVY ++ ++N
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
           A C   +V+DA+ L+R+M    + P+V+TYN ++ GL + G L +A +  +KM+   V P
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
              T+   I+GL K     EA  + + + +         YN LI+G C++G + TA ++ 
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIR 325

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +   G  P+ VTC+++I   CK  QM+ A  LL +M     V ++ TF +++      
Sbjct: 326 DDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLK 385

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +    ++ + +M       +D  L + +V  L ++ K  E +  +  LL
Sbjct: 386 CRFDSALLFIMEMLLRNFKPND-GLLTLLVSGLCQNGKQSEAIELWYRLL 434



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 66/133 (49%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A    D M K   SP +  +T L+    K  Q   V S+ + ++ N + P+     ++
Sbjct: 634 DSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIM 693

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK+G    A  +L  + +    P+ VT+N L NG C EG++ EA ++   ++    
Sbjct: 694 INGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGI 753

Query: 183 DPNVVTFNTLING 195
             + +T+ TLI+G
Sbjct: 754 SLDDITYTTLIDG 766


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 139/382 (36%), Positives = 221/382 (57%), Gaps = 3/382 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++ V  F+ ++ ++ +P +  F  +L  L K K Y T +SL +++   G+ P+L  LN+L
Sbjct: 47  DDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNIL 106

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C +G  + +F VLG+IL+  + P+T+T N L+ GLC +G +  +     K+     
Sbjct: 107 INCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGF 166

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V++ TL+NGLC+   T  A+KL   M+ +     +PDVV Y++IIDGLCKD  V++
Sbjct: 167 QMNQVSYGTLLNGLCKIGETRCAVKLL-RMIEDRST--RPDVVMYSTIIDGLCKDKIVNQ 223

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +   +M  R I PNVITY++LI GFC       A  L  EM+   + P+V T+N +I+
Sbjct: 224 AYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILID 283

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+ +  +LL  M  +G   D VTYNS++DG C    + +A  LF+ M   G + 
Sbjct: 284 ALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQP 343

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           + Y+Y  LI+  CK  ++++A  L++ +L +     V TYN ++SGL + G    AL + 
Sbjct: 344 NKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMK 403

Query: 423 DKMQLNDVVPDSFTFATYIDGL 444
            KM+ N  +P++ TF   I  L
Sbjct: 404 SKMEDNGCIPNAVTFDIIIRSL 425



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 212/408 (51%), Gaps = 3/408 (0%)

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           E  + +    F +L +    P ++ F  ++  L + ++   A+ L  +M  E   I +P+
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQM--EVKGI-EPN 99

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           +VT N +I+  C  G +  +  +L ++      P+ IT N+L+ G C   + K +     
Sbjct: 100 LVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHD 159

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +++  G Q + V++  ++N  CK G+     +LL ++  R   PD V Y++++DG C   
Sbjct: 160 KVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDK 219

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            +++A + F  M ++G   +V +Y+ LI   C   ++  A  L  EM+ + I P+V TYN
Sbjct: 220 IVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYN 279

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            L+  L + G + +A KL+ +M       D  T+ + +DGLCK+  + +A  +F  ++  
Sbjct: 280 ILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKW 339

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +    TY  LI+GLCK GRLK A KLF  L  KG   DV T + MI  LCKEG  DKA
Sbjct: 340 GIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKA 399

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             +   ME   C+P+ VTF  ++R   + ++  K   LLH M A+ L+
Sbjct: 400 LAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++  +L  L K++  D   +LF ++   G+ P+ +    LI+ LCK G    A  +  
Sbjct: 310 VVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQ 369

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            +L      +  T+N +I+GLC EG   +A  +  K+    C PN VTF+ +I  L    
Sbjct: 370 HLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKD 429

Query: 201 NTLVALKLFEEMV 213
               A KL   M+
Sbjct: 430 ENDKAEKLLHGMI 442



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/222 (20%), Positives = 97/222 (43%), Gaps = 36/222 (16%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           V+D V  +  +L  R  P +I +  +L  L ++ +   A+ L  +M++  + P+      
Sbjct: 46  VDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPN------ 99

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
                                        + T N LIN  C +G++  +  +  ++   G
Sbjct: 100 -----------------------------LVTLNILINCFCHLGQMAFSFSVLGKILKLG 130

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             PD +T +T++  LC +G++ ++      + A+    ++V++ TLL G  +  + ++  
Sbjct: 131 YQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGE-TRCA 189

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           V L +M  ++    D+ + S ++D L KDK   +  + F  +
Sbjct: 190 VKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEM 231



 Score = 45.4 bits (106), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 6/155 (3%)

Query: 24  CSFGRPPNPKTDLSSHHFK----DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           C  G+    K  L+  H K    D  +    L+   KS N+  ++A   F  M K    P
Sbjct: 286 CKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNL--DKATALFMKMKKWGIQP 343

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
              ++T L+  L K  +      LF+ L   G   D+   N++I+ LCK G+   A  + 
Sbjct: 344 NKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMK 403

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
            ++  +   PN VTF+ +I  L  +    +A +L 
Sbjct: 404 SKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLL 438


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/482 (31%), Positives = 252/482 (52%), Gaps = 20/482 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F+ M +   SP   S+ IL+  LAK  + +   +LF++L  +G+ P       L
Sbjct: 305 DEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL 364

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC       A  +   + R    P+ VT+N +I+  C  G + EA  L KK+     
Sbjct: 365 IHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH 424

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD----- 237
            P+VVT+NT+++GLC++     AL LF EM    G  C P+  ++N+II GLC+      
Sbjct: 425 VPDVVTYNTVMDGLCKSSRVEEALLLFNEM-ERLG--CTPNRRSHNTIILGLCQQSKIDQ 481

Query: 238 ----GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
               G +D+A  LL +M D    P+V+TY++LI G C +    +A+ L  +M+    +P 
Sbjct: 482 ACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPT 541

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VVT N +I+  CK G++ +   +L+ M+  G +PD VTYN+L+ G C  G+  RAREL  
Sbjct: 542 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 601

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            MV++G   +V +Y  L++  CK  ++ +A  ++ +M S    P++ TY  L+ G    G
Sbjct: 602 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 661

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET-- 471
            +   LKL  +M    + PD   + T    LCK+G    A+++   +R  +  LR E   
Sbjct: 662 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI---LREGRESLRSEAWG 718

Query: 472 ---YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
              Y   ++GL + G+++ A      +   G +P    C++++  LCK GQ  +A  +L 
Sbjct: 719 DEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLE 778

Query: 529 DM 530
           ++
Sbjct: 779 EI 780



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/537 (29%), Positives = 265/537 (49%), Gaps = 23/537 (4%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S   +L  L  + + D  + +++    N   P L  LN+L+   C  G    A  +L  +
Sbjct: 182 SLDSVLVGLMDSGRIDEALQVYR---ENRREPCLVTLNVLLEGFCSRGQVDKARELLRAM 238

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT------FNTLINGL 196
                 P+ V++  +++GLC  GR+ EA RLF    + +   +  +      +N +I GL
Sbjct: 239 PDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGL 298

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+      A+++FE+M NE      PD  +Y  +IDGL K G ++ A+ L  ++    + 
Sbjct: 299 CQNDRIDEAVQMFEKM-NERNV--SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT 355

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+ + Y SLI G C  + + +A+ LF +M   G  P  VT+N MI+ +CK G +++   L
Sbjct: 356 PSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDL 415

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI----- 371
           ++ MI+ G  PD VTYN++MDG C   R+  A  LF  M   GC  +  S+N +I     
Sbjct: 416 IKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQ 475

Query: 372 ----NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
               +  C+  K+++A  L + M  +   P V+TY+TL+SGL  +  + DA  L++ M  
Sbjct: 476 QSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 535

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
               P   T  T I GLCK G + EA +V  A+ +      + TYN L++G C+ G+ + 
Sbjct: 536 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 595

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A +L   +  +G  P+VVT + ++  LCK  ++ +A  +   M++  C P+  T+  L+ 
Sbjct: 596 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 655

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR--ECLNQFRHLL 602
           GF    +    + L  +M    +    +   +   +L    +  R  E L + R  L
Sbjct: 656 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 712



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 167/615 (27%), Positives = 273/615 (44%), Gaps = 117/615 (19%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV  F  M +   SP    + +L+  L+K ++ + V  + + +   G FPD F    ++
Sbjct: 28  EAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTIL 86

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTP-------------------------------NTV 152
             LCK G    A +V+  +      P                               N+ 
Sbjct: 87  CGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSS 146

Query: 153 TFNFLINGLCAEGRI-----------------------------MEAARLFKKLNVFAC- 182
            +N ++  LC   R+                             M++ R+ + L V+   
Sbjct: 147 AYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYREN 206

Query: 183 --DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
             +P +VT N L+ G C       A +L   M +E    C PD V+Y +++DGLCK G V
Sbjct: 207 RREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEE---CAPDEVSYCTVLDGLCKAGRV 263

Query: 241 DKA------KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           ++A      +EL       +  P++  YN +I G C  D   EA  +F +M +  V PD 
Sbjct: 264 EEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDS 323

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            ++  +I+   K GK++    L + ++  GV P TV Y SL+ G C+      ARELF  
Sbjct: 324 WSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFAD 383

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL----- 409
           M  +GC     +YN++I+A+CK   +E+A  L ++M+ +   P V+TYNT++ GL     
Sbjct: 384 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 443

Query: 410 ---------------------------------------FQVGNLGDALKLIDKMQLNDV 430
                                                   Q G L +A +L+ +M  +  
Sbjct: 444 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGH 503

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           VPD  T++T I GLC    V +A  + + +   +C+  + T N LI+GLCK GR+K A +
Sbjct: 504 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 563

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           +   +   G  PDVVT +T++H  C+ GQ ++A +LL DM A+   P+ VT+  L+ G  
Sbjct: 564 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 623

Query: 551 QNNKKSKVVVLLHKM 565
           + N+  +   +  +M
Sbjct: 624 KANRLPEACGVFAQM 638



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 199/462 (43%), Gaps = 59/462 (12%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLF---EEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
           P  + F ++I G C    T  A+K+F   EE  + +     PDV  YN +ID L K    
Sbjct: 8   PAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPY-----PDV--YNVLIDSLSKRQET 60

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           +  K+++  M DR   P+  T+ +++CG C      EA+ +  EM    + P   T + +
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
            +  C  G M++  +LLE+M       ++  YN ++   C   R+  A EL  +M  K  
Sbjct: 121 AHELCLRGSMERAFQLLEIMPV----ANSSAYNIVVVALCKAARVDDALELARTMSEKRI 176

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
                S + ++       ++++A+ +YRE    R  P ++T N LL G    G +  A +
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVYRE---NRREPCLVTLNVLLEGFCSRGQVDKARE 233

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVL----------------------------- 451
           L+  M   +  PD  ++ T +DGLCK G V                              
Sbjct: 234 LLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNI 293

Query: 452 ------------EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
                       EAVQ+F+ +          +Y  LI+GL K G+L  A  LF +L H G
Sbjct: 294 VILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSG 353

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P  V  +++IH LC     D A +L  DM  + C PS VT+  ++    +     +  
Sbjct: 354 VTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEAC 413

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            L+ KM  E   V D+   + V+D L K  +  E L  F  +
Sbjct: 414 DLIKKM-IEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 39/275 (14%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS--YNILINANCKD 377
           M Q+G+ P  + + S++ G+C VGR   A ++F  M  + C H  Y   YN+LI++  K 
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLM--EEC-HSPYPDVYNVLIDSLSKR 57

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM------------ 425
           Q+ E    + + M+     P   T+ T+L GL + G + +A  ++D+M            
Sbjct: 58  QETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATS 117

Query: 426 -----------------QLNDVVP--DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
                            QL +++P  +S  +   +  LCK   V +A+++ + +   +  
Sbjct: 118 SFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIP 177

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           L   + + ++ GL   GR+  A +++   + +   P +VT + ++   C  GQ+DKA +L
Sbjct: 178 LAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKAREL 234

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           L  M  + C P EV++CT+L G  +  +  + V L
Sbjct: 235 LRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRL 269



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 110/262 (41%), Gaps = 40/262 (15%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A +  + M+K +  P + +   L+  L K  +      +   + S+G  PD+   N L
Sbjct: 524 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 583

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C+ G T  A  +L  ++     PN VT+  L++GLC   R+ EA  +F ++    C
Sbjct: 584 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 643

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+  LI G C        LKLF EMV    A   PD V Y ++   LCK G   +
Sbjct: 644 APNLFTYTALILGFCSAGQVDGGLKLFGEMVC---AGISPDHVVYGTLAAELCKSGRSAR 700

Query: 243 AKELLLQMKD--------------------------------RNIN-----PNVITYNSL 265
           A E+L + ++                                R++      P      SL
Sbjct: 701 ALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASL 760

Query: 266 ICGFCCVDDWKEAKCLFIEMMD 287
           + G C      EA+ +  E+MD
Sbjct: 761 VAGLCKSGQGGEARAVLEEIMD 782



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 6/169 (3%)

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P    F + I G C  G   EAV++F  +  C      + YN LI+ L K    +   
Sbjct: 6   IFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYP-DVYNVLIDSLSKRQETEAVK 64

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL---- 545
           K+   +  +G  PD  T +T++  LCK G+MD+A  ++ +M ++   P   T   L    
Sbjct: 65  KMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHEL 124

Query: 546 -LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            LRG ++   +   ++ +   +A  +VV  L  +++V D L   +   E
Sbjct: 125 CLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSE 173


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 149/489 (30%), Positives = 248/489 (50%), Gaps = 6/489 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS--NGLFPDLFVLNLLINCLCKM 129
           M+++   P + ++  LL    +  + D    L + + +   G  P     N++IN L + 
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARK 281

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G    A  ++ R +R     +  TFN LI G  A G + +A  L  ++      P VVT+
Sbjct: 282 GELEKAAQLVDR-MRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTY 340

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           NT+I+G+ R+ N   A   F EM    G +  PD++TYNS+I+G CK G + +A  L   
Sbjct: 341 NTIIHGMFRSGNVEAARMKFVEM-RAMGLL--PDLITYNSLINGYCKAGNLKEALWLFGD 397

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           +K   + P+V+TYN L+ G+C + D +EA+    EM++ G QPDV T+  ++N + K   
Sbjct: 398 LKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRN 457

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +  V    + M+ +G+ PD   YN+ +    ++G  S A +L   M+S+G   D  +YNI
Sbjct: 458 LAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNI 517

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
            ++  CK   ++DA  L+ +M+S+ ++P  ITY  L+    + G L +A  + D M ++ 
Sbjct: 518 FLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSG 577

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P + T+  +I   C+ G +  A   FQ +          TYN LI+ LC+MGR   A 
Sbjct: 578 LPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAY 637

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           + FH +  +G  P+  T + +I   CKEG  ++A  L  +M      P   T   L +GF
Sbjct: 638 QHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697

Query: 550 VQNNKKSKV 558
            +   K  +
Sbjct: 698 DEGQSKHAI 706



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 211/422 (50%), Gaps = 2/422 (0%)

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N ++  L  E R  +   ++ ++     +P++VT+NTL++   R      A KL  EM  
Sbjct: 200 NLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEA 259

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
             G  C P  VTYN +I+GL + G ++KA +L+ +M+  +   +  T+N LI G+     
Sbjct: 260 RPGG-CLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLITGYFARGS 317

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
            ++A  L +EM + G+ P VVT+N +I+   + G ++        M   G+ PD +TYNS
Sbjct: 318 VEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNS 377

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++G+C  G +  A  LF  +   G    V +YNIL++  C+   +E+A    +EM+ + 
Sbjct: 378 LINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQG 437

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
            +P V TY  L++G  +V NL    +  D+M    + PD F + T I      G   EA 
Sbjct: 438 CQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAF 497

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           Q+ + + +        TYN  ++GLCK G LK A  L+ ++   G  PD +T + +IH  
Sbjct: 498 QLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAH 557

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C+ G++ +A D+   M      PS VT+   +  + +            KM  E +  ++
Sbjct: 558 CERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNE 617

Query: 575 LS 576
           ++
Sbjct: 618 VT 619



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 185/382 (48%), Gaps = 33/382 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  ++  + ++   +     F  + + GL PDL   N LIN  CK G    A  +
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            G + R+   P+ +T+N L++G C  G + EA R  +++    C P+V T+  L+NG  +
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRK 454

Query: 199 TRNTLVALKLFEEMVNE------------------FGAICKP--------------DVVT 226
            RN  +  + F+EM+++                   G+  +               D VT
Sbjct: 455 VRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVT 514

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN  +DGLCK G +  A  L ++M    + P+ ITY  LI   C     +EA+ +F  M+
Sbjct: 515 YNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGML 574

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +G+ P  VT+   I+  C+ G +       + M++ GV P+ VTYN L+   C +GR +
Sbjct: 575 VSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTN 634

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A + F  M+ +G   + Y+Y +LI+ NCK+   E+A+ LY EM    I P   T+N L 
Sbjct: 635 LAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALF 694

Query: 407 SGLFQVGNLGDALKLIDKMQLN 428
            G F  G    A++ ++ + L 
Sbjct: 695 KG-FDEGQSKHAIQYMENVVLG 715



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 174/384 (45%), Gaps = 6/384 (1%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FNT       +  + + L  F EM +       P +   N ++  L  +   D  + +  
Sbjct: 164 FNTRARNPAPSTCSTLCLAAFREMAHHG---VPPFIKECNLVLRALRDEARWDDMRSVYA 220

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM--MDNGVQPDVVTFNAMINYNCK 306
           +M    I P+++TYN+L+  F       +A  L  EM     G  P  VT+N +IN   +
Sbjct: 221 EMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLAR 280

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G+++K  +L++ M +        T+N L+ G+   G + +A  L + M ++G    V +
Sbjct: 281 KGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVT 339

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN +I+   +   VE A   + EM +  + P +ITYN+L++G  + GNL +AL L   ++
Sbjct: 340 YNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLK 399

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              + P   T+   +DG C+ G + EA +  Q +    C+  + TY  L+NG  K+  L 
Sbjct: 400 RAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLA 459

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
              + F  +  KG  PD    +T I      G   +A  L   M ++      VT+   L
Sbjct: 460 MVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFL 519

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKL 570
            G  ++       VL  KM ++ L
Sbjct: 520 DGLCKSGNLKDAYVLWMKMVSDGL 543



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 3/227 (1%)

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M   G    +   N+++ A   + + +D   +Y EML   I PS++TYNTLL   F+
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 412 VGNLGDALKLIDKMQL--NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            G +  A KL+ +M+      +P   T+   I+GL + G + +A Q+   +R  K +   
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASA 302

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            T+N LI G    G ++ A  L   ++++G +P VVT +T+IH + + G ++ A    ++
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           M A   +P  +T+ +L+ G+ +     + + L   +    L  S L+
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLT 409


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 242/456 (53%), Gaps = 17/456 (3%)

Query: 92  AKNKQYDTVVSLFKRLNSNGLF-----------PDLFVLNLLINCLCKMGITSGAFVVLG 140
           A+     T  +L K+L+++G             PD+   N ++   C  G    A  ++ 
Sbjct: 91  ARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMVAGYCGAGQLDAARRLVA 150

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            +      P+  T+N LI GLC  GR   A  +  ++    C P+VVT+  L+   C+  
Sbjct: 151 EMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRS 207

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A+KL +EM ++    C PD+VTYN +++G+C++G VD A E L  +      PN +
Sbjct: 208 GYKQAMKLLDEMRDKG---CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 264

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           +YN ++ G C  + W++A+ L  EM   G  P+VVTFN +I++ C+ G ++    +LE +
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            + G  P++++YN L+  FC   ++ +A      MVS+GC  D+ SYN L+ A C+  +V
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 384

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           + AV L  ++  +   P +I+YNT++ GL + G   +AL+L+++M    + PD  T++T 
Sbjct: 385 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 444

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
             GLC+   + +A++ F  +++         YN +I GLCK     +A  LF  +   G 
Sbjct: 445 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 504

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +P+  T + +I  L  EG + +A DLL ++ ++  V
Sbjct: 505 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 238/470 (50%), Gaps = 11/470 (2%)

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
           RL  +   PD      LI  L   G T+ A     R+L +C  P+ + +N ++ G C  G
Sbjct: 86  RLVGSARRPDAGTCAALIKKLSASGRTAEAR----RVLAAC-GPDVMAYNAMVAGYCGAG 140

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           ++  A RL  ++ V   +P+  T+NTLI GLC    T  AL + +EM+      C PDVV
Sbjct: 141 QLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR---CVPDVV 194

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TY  +++  CK     +A +LL +M+D+   P+++TYN ++ G C      +A      +
Sbjct: 195 TYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL 254

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
              G +P+ V++N ++   C   + +    L+  M Q+G  P+ VT+N L+   C  G +
Sbjct: 255 PSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 314

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A E+   +   GC  +  SYN L++A CK +K++ A+     M+S    P +++YNTL
Sbjct: 315 EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTL 374

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           L+ L + G +  A++L+ +++     P   ++ T IDGL K G   EA+++   + +   
Sbjct: 375 LTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGL 434

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +  I TY+ +  GLC+  R++ A + F ++Q  G  P+ V  + +I  LCK  +   A D
Sbjct: 435 QPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAID 494

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           L   M    C+P+E T+  L+ G        +   LL ++ +  +V   L
Sbjct: 495 LFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSL 544



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 193/381 (50%), Gaps = 5/381 (1%)

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
           +M   P   ++  L+  L    +    +++   +      PD+    +L+   CK     
Sbjct: 151 EMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK 210

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            A  +L  +     TP+ VT+N ++NG+C EGR+ +A    K L  + C+PN V++N ++
Sbjct: 211 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 270

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
            GLC       A    EE++ E G   C P+VVT+N +I  LC+ G V+ A E+L Q+  
Sbjct: 271 KGLCTAERWEDA----EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 326

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
               PN ++YN L+  FC      +A      M+  G  PD+V++N ++   C+ G++D 
Sbjct: 327 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 386

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              LL  +  +G  P  ++YN+++DG    G+   A EL   MVSKG + D+ +Y+ +  
Sbjct: 387 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 446

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             C++ ++EDA+  + ++    IRP+ + YN ++ GL +      A+ L   M  N  +P
Sbjct: 447 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 506

Query: 433 DSFTFATYIDGLCKNGFVLEA 453
           +  T+   I+GL   G + EA
Sbjct: 507 NESTYTILIEGLAYEGLIKEA 527



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 202/397 (50%), Gaps = 15/397 (3%)

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           +  L   G + EA RL       A  P+  T   LI  L  +  T  A ++         
Sbjct: 72  LRSLVRRGELDEALRLVGS----ARRPDAGTCAALIKKLSASGRTAEARRVL-------- 119

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
           A C PDV+ YN+++ G C  G +D A+ L+ +M    + P+  TYN+LI G C       
Sbjct: 120 AACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTAN 176

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +  EM+     PDVVT+  ++   CK     +  +LL+ M  +G  PD VTYN +++
Sbjct: 177 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 236

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C  GR+  A E   ++ S GC  +  SYNI++   C  ++ EDA  L  EM  +   P
Sbjct: 237 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 296

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +V+T+N L+S L + G +  AL++++++      P+S ++   +   CK   + +A+   
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             + +  C   I +YN L+  LC+ G +  A +L H+L+ KG  P +++ +T+I  L K 
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 416

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           G+  +A +LL +M +K   P  +T+ T+  G  + ++
Sbjct: 417 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 453



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 188/378 (49%), Gaps = 3/378 (0%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G   +  A+   D M++ +  P + ++TILL    K   Y   + L   +   G  PD+ 
Sbjct: 170 GRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV 229

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N+++N +C+ G    A   L  +      PNTV++N ++ GLC   R  +A  L  ++
Sbjct: 230 TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 289

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
               C PNVVTFN LI+ LCR      AL++ E+ + ++G  C P+ ++YN ++   CK 
Sbjct: 290 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ-IPKYG--CTPNSLSYNPLLHAFCKQ 346

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             +DKA   L  M  R   P++++YN+L+   C   +   A  L  ++ D G  P ++++
Sbjct: 347 KKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISY 406

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +I+   K GK  +   LL  M+ +G+ PD +TY+++  G C   RI  A   F  +  
Sbjct: 407 NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 466

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            G R +   YN +I   CK ++   A+ L+  M+     P+  TY  L+ GL   G + +
Sbjct: 467 MGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKE 526

Query: 418 ALKLIDKMQLNDVVPDSF 435
           A  L+D++    VV  S 
Sbjct: 527 ARDLLDELCSRGVVRKSL 544



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 196/388 (50%), Gaps = 8/388 (2%)

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
           +LV     +E +   G+  +PD  T  ++I  L   G   +A+ +L         P+V+ 
Sbjct: 74  SLVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAA-----CGPDVMA 128

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           YN+++ G+C       A+ L  EM    V+PD  T+N +I   C  G+      +L+ M+
Sbjct: 129 YNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 185

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           +R   PD VTY  L++  C      +A +L   M  KGC  D+ +YN+++N  C++ +V+
Sbjct: 186 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 245

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           DA+   + + S    P+ ++YN +L GL       DA +L+ +M      P+  TF   I
Sbjct: 246 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 305

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
             LC+ G V  A++V + I    C     +YN L++  CK  ++  A      +  +G  
Sbjct: 306 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 365

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           PD+V+ +T++  LC+ G++D A +LL  ++ K C P  +++ T++ G  +  K  + + L
Sbjct: 366 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 425

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           L++M ++ L    ++ S+    L  +D+
Sbjct: 426 LNEMVSKGLQPDIITYSTIAAGLCREDR 453



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 178/338 (52%), Gaps = 4/338 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M     +P + ++ +++  + +  + D  +   K L S G  P+    N+++
Sbjct: 211 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 270

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC       A  ++G + +    PN VTFN LI+ LC +G +  A  + +++  + C 
Sbjct: 271 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 330

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN +++N L++  C+ +    A+   + MV+     C PD+V+YN+++  LC+ G VD A
Sbjct: 331 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG---CYPDIVSYNTLLTALCRSGEVDVA 387

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ELL Q+KD+   P +I+YN++I G       KEA  L  EM+  G+QPD++T++ +   
Sbjct: 388 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 447

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C++ +++   R    +   G+ P+TV YN+++ G C       A +LF  M+  GC  +
Sbjct: 448 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 507

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVI 400
             +Y ILI     +  +++A  L  E+ S   +R S+I
Sbjct: 508 ESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLI 545



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 4/137 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + EA+   + M+     P + +++ +   L +  + +  +  F ++   G+ P+  + N 
Sbjct: 419 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 478

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I  LCK   T  A  +   ++ +   PN  T+  LI GL  EG I EA  L  +L    
Sbjct: 479 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL---- 534

Query: 182 CDPNVVTFNTLINGLCR 198
           C   VV  + +  G  R
Sbjct: 535 CSRGVVRKSLINKGAIR 551


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 248/463 (53%), Gaps = 5/463 (1%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F D  +    ++ R ++G++  + A+   D M      PG+ +F  +L  L K++++D  
Sbjct: 189 FPDVVTHNVLIDARFRAGDV--DAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKA 246

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
             +F+ ++   + PD+   N+LI   C++G    A      + +   TP+ V+F+ LI  
Sbjct: 247 KEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGL 306

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
               G++  AA   +++      P+ V +  +I G CR  +   AL++ +EMV   G  C
Sbjct: 307 FSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV---GLGC 363

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PDVVTYN++++GLCK   +  A+ELL +MK+R + P++ T+ +LI G+C   ++++A  
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQ 423

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF  ++   ++PDVV +N++I+  C+ G + K N L + M  R + P+ VTY+ L+D  C
Sbjct: 424 LFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHC 483

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G++  A      MVSKG   ++ +YN +I   C+   V+      ++M+ + I P +I
Sbjct: 484 EKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLI 543

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T+NTL+ G  +  N+  A  + + M+   V PD+ T+   I+G  + G + EA +VF+ +
Sbjct: 544 TFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKM 603

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
                E    TY  LING    G  K A +L   + H+G  PD
Sbjct: 604 GASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 228/454 (50%), Gaps = 3/454 (0%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           + LN++++  CK      A  V+  + + C  P+ VT N LI+     G +  A  L   
Sbjct: 158 YTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDS 217

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P +VTFN+++ GLC+ R    A ++F  M         PDV ++N +I G C+
Sbjct: 218 MANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQ---CSVAPDVRSFNILIGGFCR 274

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G V++A +   +M+ R + P+V++++ LI  F        A     EM   G+ PD V 
Sbjct: 275 VGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +I   C+ G M +  R+ + M+  G  PD VTYN+L++G C   R+  A EL   M 
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK 394

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +G   D+ ++  LI+  C+D   E A+ L+  +L +R+RP V+ YN+L+ G+ + G+L 
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLA 454

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A +L D M   ++ P+  T++  ID  C+ G V EA      + +      I TYN +I
Sbjct: 455 KANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSII 514

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            G C+ G +K   +   ++     +PD++T +T+IH   KE  M  A ++   ME +   
Sbjct: 515 KGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQ 574

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           P  VT+  ++ GF +     +   +  KM A  +
Sbjct: 575 PDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGI 608



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 255/530 (48%), Gaps = 4/530 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           ++   P+P    F +L+    ++++       F+ L  + +       N L+  L + G 
Sbjct: 78  LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGW 137

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A      +L S    N  T N +++  C      +A  +  ++      P+VVT N 
Sbjct: 138 PHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNV 197

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+   R  +   A+ L + M N+     KP +VT+NS++ GLCK    DKAKE+   M 
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKG---LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMD 254

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             ++ P+V ++N LI GFC V + +EA   + EM   GV PDVV+F+ +I      GKMD
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
                L  M   G+ PD V Y  ++ GFC  G +S A  +   MV  GC  DV +YN L+
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N  CK  ++ DA  L  EM    + P + T+ TL+ G  + GN   AL+L D +    + 
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLR 434

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD   + + IDG+C+ G + +A +++  +   +      TY+ LI+  C+ G+++ A   
Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGF 494

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              +  KG +P+++T +++I   C+ G + K    L  M   N +P  +TF TL+ G+++
Sbjct: 495 LDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIK 554

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                    + + M  E +V  D    + +++  S+     E    F+ +
Sbjct: 555 EENMHGAFNVFNIMEKE-MVQPDAVTYNMIINGFSEQGNMEEAGRVFKKM 603



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 241/492 (48%), Gaps = 3/492 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++    K+ ++D   ++   +    +FPD+   N+LI+   + G    A  ++  +
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P  VTFN ++ GLC   R  +A  +F+ ++  +  P+V +FN LI G CR    
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A+K ++EM         PDVV+++ +I      G +D A   L +MK   + P+ + Y
Sbjct: 279 EEAMKFYKEMQQRG---VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIY 335

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             +I GFC      EA  +  EM+  G  PDVVT+N ++N  CK  ++     LL  M +
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE 395

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RGV PD  T+ +L+ G+C  G   +A +LF +++ +  R DV +YN LI+  C+   +  
Sbjct: 396 RGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAK 455

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+ +M +  I P+ +TY+ L+    + G + +A   +D+M     +P+  T+ + I 
Sbjct: 456 ANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIK 515

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G C++G V +  Q  Q +        + T+N LI+G  K   +  A  +F+ ++ +   P
Sbjct: 516 GYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQP 575

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D VT + +I+   ++G M++A  +   M A    P   T+ +L+ G V      +   L 
Sbjct: 576 DAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLH 635

Query: 563 HKMAAEKLVVSD 574
            +M        D
Sbjct: 636 DEMMHRGFAPDD 647


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 259/512 (50%), Gaps = 4/512 (0%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILL-TMLAKNKQYDTVVSLFKRLNSNGLFP 114
           +S +     ++  F  +I+++  P   +F +L+ T  +K    D + +L   +   GL P
Sbjct: 183 RSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATL-STMQGFGLSP 241

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D    N L+N  C+ G+   A  +L R+ R    P   T+N L++     G I +A ++ 
Sbjct: 242 DAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV 301

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           + +  +  +P++ T+N L  GLC+      A +L +EM  E      PDVVTYN+++D  
Sbjct: 302 ESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM--ERLGTALPDVVTYNTLVDAC 359

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
            K      A  LL +M+D+ + P ++T+N ++   C     +EA     ++ + G+ PDV
Sbjct: 360 FKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDV 419

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +T+N +I+  CK G + K   L++ M+ +G+  DT T N+++   C + R   A EL  S
Sbjct: 420 ITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHS 479

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
              +G   D  SY  ++ A  K+   E A+ L+ +M+  ++ PS+ TYNTL+ GL ++  
Sbjct: 480 PPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMER 539

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +A+  +++     +VPD  T+   I   CK G +  A +    +     +  + T N 
Sbjct: 540 LKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNT 599

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L+NGLC  G+L  A KLF     KG   DV+T +T+I  +CK G +D A     DME K 
Sbjct: 600 LMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG 659

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
             P   T+  +L    +  +  +   +LHK+A
Sbjct: 660 LQPDAFTYNVVLSALSEAGRSEEAHNMLHKLA 691



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 226/485 (46%), Gaps = 43/485 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG-LFPDLFVLNLL 122
           +A    + M      P + ++ +L   L +  + D    L   +   G   PD+   N L
Sbjct: 296 QATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTL 355

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++   K   +S A  +L  +      P  VT N ++  LC EG++ EA    +K+     
Sbjct: 356 VDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGL 415

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V+T+NTLI+  C+  N   A  L +EMV   G   K D  T N+++  LCK    + 
Sbjct: 416 APDVITYNTLIDAYCKAGNVAKAFTLMDEMV---GKGLKMDTFTLNTVLYNLCKMKRYED 472

Query: 243 AKELLL-----------------------------------QMKDRNINPNVITYNSLIC 267
           A+ELL                                    QM +R + P++ TYN+LI 
Sbjct: 473 AEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIK 532

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C ++  KEA     E ++ G+ PD  T+N +I+  CK+G ++   R    M++    P
Sbjct: 533 GLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKP 592

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D VT N+LM+G CL G++ +A +LF S V KG + DV +YN LI + CK   V+ A+  +
Sbjct: 593 DVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFF 652

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            +M  + ++P   TYN +LS L + G   +A  ++ K+  +  +  SF            
Sbjct: 653 DDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADE 712

Query: 448 GFVLEAVQVFQAIRNCKCELR-IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
             V E     +A  + K +   +ETY   +NGLC  G+LK A  +   +  KG +P  V 
Sbjct: 713 ADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKG-MP--VD 769

Query: 507 CSTMI 511
           CST I
Sbjct: 770 CSTYI 774



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 213/457 (46%), Gaps = 43/457 (9%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARL--FKKLNVFACDPNVVTFNTLINGLCRTRN 201
           R    P+    N +++ L      +  A L  F+ L      PN  TFN L++  C    
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              AL     M   FG    PD VTYN++++  C+ G + +A+ LL +MK   I P   T
Sbjct: 224 LADALATLSTMQG-FG--LSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPT 280

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           YN+L+  F  +   K+A  +   M   G +PD+ T+N +    C+ GK+D+  RL + M 
Sbjct: 281 YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEME 340

Query: 322 QRGVN-PDTVTYNSLMDGFCLVGRISR-ARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           + G   PD VTYN+L+D  C   R S  A  L   M  KG +  + ++NI++ + CK+ K
Sbjct: 341 RLGTALPDVVTYNTLVDA-CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +E+A+    ++  E + P VITYNTL+    + GN+  A  L+D+M    +  D+FT  T
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 440 YIDGLCK----------------NGFVLEAVQVFQAIR------NCKCELR--------- 468
            +  LCK                 GFV + V     +       N +  LR         
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 469 ----IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I TYN LI GLC+M RLK A    +    KG +PD  T + +IH  CKEG ++ A 
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
                M   +  P  VT  TL+ G   + K  K + L
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKL 616



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 202/420 (48%), Gaps = 10/420 (2%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG--FVD 241
           P     +  ++   R R   +A +L   +    G   +P +   N+++  L +       
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRG--VRPSLQAANAVLSALSRSPSTLPQ 190

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            + ++   + +  ++PN  T+N L+   C      +A      M   G+ PD VT+N ++
Sbjct: 191 ASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL 250

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N +C+ G + +   LL  M + G+ P   TYN+L+  F  +G I +A ++  SM + G  
Sbjct: 251 NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE 310

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIR---PSVITYNTLLSGLFQVGNLGDA 418
            D+ +YN+L    C+  KV++A  L  EM  ER+    P V+TYNTL+   F+     DA
Sbjct: 311 PDLRTYNVLAMGLCQAGKVDEAFRLKDEM--ERLGTALPDVVTYNTLVDACFKWRCSSDA 368

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           L+L+++M+   V P   T    +  LCK G + EA+   + I        + TYN LI+ 
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK G +  A  L   +  KG   D  T +T+++ LCK  + + A +LL     +  VP 
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           EV++ T++  + +       + L  +M   KL+ S +S  + ++  L + ++ +E +++ 
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS-ISTYNTLIKGLCRMERLKEAIDKL 547



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 195/394 (49%), Gaps = 6/394 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTL--VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           P++   N +++ L R+ +TL   +L +F  ++        P+  T+N ++   C  G + 
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIE---LRLHPNHYTFNLLVHTHCSKGTLA 225

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A   L  M+   ++P+ +TYN+L+   C      EA+ L   M  +G+ P   T+N ++
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   + G + +  +++E M   G  PD  TYN L  G C  G++  A  L   M   G  
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTA 345

Query: 362 -HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             DV +YN L++A  K +   DA+ L  EM  + ++P+++T+N ++  L + G L +AL 
Sbjct: 346 LPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALG 405

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
            ++K+    + PD  T+ T ID  CK G V +A  +   +     ++   T N ++  LC
Sbjct: 406 KLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           KM R + A +L H    +G +PD V+  T++    KE   + A  L   M  +  +PS  
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           T+ TL++G  +  +  + +  L++   + LV  +
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDE 559



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 141/310 (45%), Gaps = 22/310 (7%)

Query: 44  GTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL 103
           GT +A +  +           A+  +D MI+ K  P ++++  L+  L + ++    +  
Sbjct: 493 GTVMAAYFKE------YNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDK 546

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
                  GL PD    N++I+  CK G    AF    +++ + F P+ VT N L+NGLC 
Sbjct: 547 LNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCL 606

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
            G++ +A +LF+         +V+T+NTLI  +C+  +   AL  F++M  E   + +PD
Sbjct: 607 HGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDM--EVKGL-QPD 663

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
             TYN ++  L + G  ++A  +L ++ D           S  C         EA     
Sbjct: 664 AFTYNVVLSALSEAGRSEEAHNMLHKLADSG-----KLSQSFACPLLKPSSADEADVKEH 718

Query: 284 EMMDNGVQPDVVTFNAMINYN------CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           E        +    NA+  Y       C  G++ +   +L+ M+Q+G+  D  TY +LM+
Sbjct: 719 EGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLME 778

Query: 338 GFCLVGRISR 347
           G  L+ R  R
Sbjct: 779 G--LIKRQKR 786


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/467 (29%), Positives = 240/467 (51%), Gaps = 4/467 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+     P   ++T ++   +   +++    +F+ +   GL PD+   N  ++ LCK G 
Sbjct: 177 MVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGR 236

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           +  A  +   +      PN VT+  L++G   EG   +    F  +       N + F  
Sbjct: 237 SKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTI 296

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+   +      A+ +  EM    G    PDV TY+++I  LC+ G +  A +   QM 
Sbjct: 297 LIDAYAKRGMMDEAMLILSEMQ---GQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMI 353

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV-QPDVVTFNAMINYNCKDGKM 310
              + PN + Y+SLI GFC   D  +AK L  EMM+NG+ +P++  FN++++  CK+G++
Sbjct: 354 GTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRV 413

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
              + + +L+   G   D + +N+L+DG+CLVG + +A  +  +M+S G   D ++YN L
Sbjct: 414 MDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTL 473

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +N   K  +++D + L+REM  ++I+P+ +TYN +L GLF+ G    A K++ +M     
Sbjct: 474 VNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGT 533

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
                T+   + GLC+N    EA+ +FQ +     +  I T N +IN +  + R + A  
Sbjct: 534 TVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKD 593

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           LF  +   G +P+  T   MI  L KEG +++A+++   ME   C P
Sbjct: 594 LFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP 640



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 249/493 (50%), Gaps = 10/493 (2%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR- 172
           P +F   +++N  C+           GR+LR+    +    N ++  LC   R  +A + 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           L +++    C P+  ++  ++  LC    +  AL L   M  E G +C PDVVTYN++I 
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEG-VCSPDVVTYNTVIH 124

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G  K+G + KA  L  +M  +   P+V+T+NS+I   C       A+ L  +M+DNGV P
Sbjct: 125 GFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPP 184

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           + VT+ +MI+     G+ ++  ++   M  RG+ PD V++NS MD  C  GR   A E+F
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
            SM +KG R ++ +Y IL++    +    D +  +  M  + I  + + +  L+    + 
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKR 304

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G + +A+ ++ +MQ   + PD FT++T I  LC+ G + +AV  F  +     +     Y
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVY 364

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKG-PIPDVVTCSTMIHWLCKEGQMDKAN---DLLL 528
           + LI G C  G L  A +L + + + G P P++   ++++H +CKEG++  A+   DL+ 
Sbjct: 365 HSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVK 424

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           D+  ++ +   + F TL+ G+    +  K   +L  M +   +  D    + +V+   K 
Sbjct: 425 DIGERSDI---IMFNTLIDGYCLVGEMGKAFSVLDAMISAG-IGPDTFTYNTLVNGYFKS 480

Query: 589 KKYRECLNQFRHL 601
            +  + LN FR +
Sbjct: 481 GRIDDGLNLFREM 493



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 257/525 (48%), Gaps = 5/525 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + ++  ++    K  +     +L+  +   G  PD+   N +IN LCK      A +
Sbjct: 113 SPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAEL 172

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L +++ +   PN VT+  +I+G    GR  EA ++F+++      P++V++N+ ++ LC
Sbjct: 173 LLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLC 232

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +   +  A ++F  M  +     +P++VTY  ++ G   +G           MK   I  
Sbjct: 233 KHGRSKEAAEIFYSMAAKGH---RPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVA 289

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N + +  LI  +       EA  +  EM   G+ PDV T++ +I+  C+ G++       
Sbjct: 290 NCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKF 349

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC-RHDVYSYNILINANCK 376
             MI  GV P+TV Y+SL+ GFC  G + +A+EL   M++ G  R ++  +N ++++ CK
Sbjct: 350 NQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICK 409

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           + +V DA  ++  +     R  +I +NTL+ G   VG +G A  ++D M    + PD+FT
Sbjct: 410 EGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFT 469

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + T ++G  K+G + + + +F+ + + K +    TYN +++GL + GR   A K+ H + 
Sbjct: 470 YNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI 529

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G    + T + ++  LC+    D+A  +   +   N   +  T  T++       ++ 
Sbjct: 530 GCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRRE 589

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +   L   ++   LV +  +    + +LL K+    E  N F  +
Sbjct: 590 EAKDLFSAISDSGLVPNASTYGIMIRNLL-KEGSVEEADNMFSSM 633



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 244/492 (49%), Gaps = 6/492 (1%)

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           T+L  +    +  D V  L +R+   G  PD F   +++  LC    +  A  +L  + +
Sbjct: 48  TVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAK 107

Query: 145 --SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                +P+ VT+N +I+G   EG+I +A  L+ ++      P+VVT N++IN LC+ R  
Sbjct: 108 EEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAV 167

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A  L  +MV+       P+ VTY S+I G    G  ++A ++  +M  R + P+++++
Sbjct: 168 DNAELLLRQMVDNG---VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSW 224

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           NS +   C     KEA  +F  M   G +P++VT+  +++    +G    +      M  
Sbjct: 225 NSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKG 284

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G+  + + +  L+D +   G +  A  +   M  +G   DV++Y+ LI+A C+  ++ D
Sbjct: 285 DGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLAD 344

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV-PDSFTFATYI 441
           AV  + +M+   ++P+ + Y++L+ G    G+L  A +L+ +M  N +  P+   F + +
Sbjct: 345 AVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIV 404

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
             +CK G V++A  +F  +++      I  +N LI+G C +G +  A  +   +   G  
Sbjct: 405 HSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIG 464

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           PD  T +T+++   K G++D   +L  +M  K   P+ VT+  +L G  +  +      +
Sbjct: 465 PDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKM 524

Query: 562 LHKMAAEKLVVS 573
           LH+M      VS
Sbjct: 525 LHEMIGCGTTVS 536



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 225/456 (49%), Gaps = 4/456 (0%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S   F++   K G   S EA   F  M      P + ++ ILL   A    +  ++S
Sbjct: 220 DIVSWNSFMDSLCKHGR--SKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMS 277

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            F  +  +G+  +  V  +LI+   K G+   A ++L  +     +P+  T++ LI+ LC
Sbjct: 278 FFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALC 337

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GR+ +A   F ++      PN V +++LI G C   + + A +L  EM+N    I +P
Sbjct: 338 RMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNN--GIPRP 395

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           ++  +NSI+  +CK+G V  A  +   +KD     ++I +N+LI G+C V +  +A  + 
Sbjct: 396 NIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVL 455

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M+  G+ PD  T+N ++N   K G++D    L   M  + + P TVTYN ++DG    
Sbjct: 456 DAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRA 515

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           GR   A+++   M+  G    + +YNI++   C++   ++A+ +++++ +  ++ ++ T 
Sbjct: 516 GRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTL 575

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           NT+++ ++ V    +A  L   +  + +VP++ T+   I  L K G V EA  +F ++  
Sbjct: 576 NTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEK 635

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             C       N  I  L + G +  A     ++  K
Sbjct: 636 SGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGK 671



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 195/418 (46%), Gaps = 38/418 (9%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           +  P + TY  +++G C+    +       ++    +  +    N+++   CC     +A
Sbjct: 3   VAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDA 62

Query: 279 -KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI-QRGV-NPDTVTYNSL 335
            K L   M + G  PD  ++  ++   C D +  +   LL +M  + GV +PD VTYN++
Sbjct: 63  VKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTV 122

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           + GF   G+I +A  L+  M+ +G   DV ++N +INA CK + V++A  L R+M+   +
Sbjct: 123 IHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGV 182

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P+ +TY +++ G   +G   +A K+  +M    ++PD  ++ +++D LCK+G   EA +
Sbjct: 183 PPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAE 242

Query: 456 VFQAIRNCKCELRIETY------------------------------NC-----LINGLC 480
           +F ++        I TY                              NC     LI+   
Sbjct: 243 IFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYA 302

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G +  A  +   +Q +G  PDV T ST+I  LC+ G++  A D    M      P+ V
Sbjct: 303 KRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTV 362

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            + +L++GF  +    K   L+++M    +   +++  + +V  + K+ +  +  + F
Sbjct: 363 VYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 161/541 (29%), Positives = 274/541 (50%), Gaps = 38/541 (7%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS-PGMTSFTILLTMLAKNKQYDTVVSLF 104
           +++  L+   +SG+++  +AV  +D ++++  S P + +   LL++L K+++      ++
Sbjct: 136 ALSHVLHAYAESGSLS--KAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVY 193

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
             +   G   D +   +L+  +C  G +  G  ++ GR  + C  PN V +N +I G C 
Sbjct: 194 DEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCK 252

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM----------- 212
            G I  A  +FK+L +    P + TF T+ING C+  + + + +L  E+           
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312

Query: 213 -----------------VNEFGAI----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
                                G I    CKPDV TYN +I+ LCK+G  + A   L +  
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + + PN ++Y  LI  +C   ++  A  L ++M + G +PD+VT+  +I+     G MD
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               +   +I RGV+PD   YN LM G C  GR   A+ LF  M+ +    D Y Y  LI
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +   +    ++A  ++   + + ++  V+ +N ++ G  + G L +AL  +++M    +V
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD FT++T IDG  K   +  A+++F+ +   KC+  + TY  LING C  G  K A + 
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQ-MDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           F  +Q +  +P+VVT +T+I  L KE   ++KA      M    CVP+EVTF  LL+GFV
Sbjct: 613 FKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFV 672

Query: 551 Q 551
           +
Sbjct: 673 K 673



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 235/496 (47%), Gaps = 20/496 (4%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F  ++    K   +     L   +   GL   ++ LN +I+   + G        
Sbjct: 273 PTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAES 332

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +G I+ +   P+  T+N LIN LC EG+   A     + +     PN +++  LI   C+
Sbjct: 333 IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           ++   +A KL  +M  E G  CKPD+VTY  +I GL   G +D A  + +++ DR ++P+
Sbjct: 393 SKEYDIASKLLLQMA-ERG--CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              YN L+ G C    +  AK LF EM+D  + PD   +  +I+   + G  D+  ++  
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           L +++GV  D V +N+++ GFC  G +  A      M  +    D ++Y+ +I+   K Q
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +  A+ ++R M   + +P+V+TY +L++G    G+   A +   +MQL D+VP+  T+ 
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYT 629

Query: 439 TYIDGLCKNGFVLE-AVQVFQAIRNCKCELRIETYNCLINGLCK--------------MG 483
           T I  L K    LE AV  ++ +   KC     T+NCL+ G  K               G
Sbjct: 630 TLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHG 689

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +     + FHR++  G        ++ +  LC  G +  A      M  K   P  V+F 
Sbjct: 690 QSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFA 749

Query: 544 TLLRGF--VQNNKKSK 557
            +L GF  V N+K+ +
Sbjct: 750 AILHGFCVVGNSKQWR 765



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 173/400 (43%), Gaps = 53/400 (13%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV F D   K    P   S+  L+    K+K+YD    L  ++   G  PD+    +LI+
Sbjct: 364 AVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH 423

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            L   G    A  +  +++    +P+   +N L++GLC  GR + A  LF ++      P
Sbjct: 424 GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILP 483

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +   + TLI+G  R+ +   A K+F   V E G   K DVV +N++I G C+ G +D+A 
Sbjct: 484 DAYVYATLIDGFIRSGDFDEARKVFSLSV-EKGV--KVDVVHHNAMIKGFCRSGMLDEAL 540

Query: 245 ELLLQMKDRNI-----------------------------------NPNVITYNSLICGF 269
             + +M + ++                                    PNV+TY SLI GF
Sbjct: 541 ACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK-MDKVNRLLELMIQRGVNPD 328
           CC  D+K A+  F EM    + P+VVT+  +I    K+   ++K     ELM+     P+
Sbjct: 601 CCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN 660

Query: 329 TVTYNSLMDGFCLV--------------GRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            VT+N L+ GF                 G+ S   E F  M S G      +YN  +   
Sbjct: 661 EVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCL 720

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           C    V+ A     +M+ +   P  +++  +L G   VGN
Sbjct: 721 CVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 172/356 (48%), Gaps = 5/356 (1%)

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R ++  + +KLF+ + +E       +    +S +  L +    ++ +++L  +++ N+  
Sbjct: 73  RIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKL 132

Query: 258 NVITYNSLICGFCCVDDWKEAKCLF---IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
                + ++  +       +A  ++   +E+ D+   PDV+  N++++   K  ++    
Sbjct: 133 THEALSHVLHAYAESGSLSKAVEIYDYVVELYDS--VPDVIACNSLLSLLVKSRRLGDAR 190

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           ++ + M  RG + D  +   L+ G C  G++   R+L      KGC  ++  YN +I   
Sbjct: 191 KVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGY 250

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK   +E+A  +++E+  +   P++ T+ T+++G  + G+   + +L+ +++   +    
Sbjct: 251 CKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSV 310

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           +     ID   ++G+ ++  +    I    C+  + TYN LIN LCK G+ + A      
Sbjct: 311 WFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDE 370

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
              KG IP+ ++ + +I   CK  + D A+ LLL M  + C P  VT+  L+ G V
Sbjct: 371 ASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 19/311 (6%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A   F  M+     P    +  L+    ++  +D    +F      G+  D+   N +I 
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C+ G+   A   + R+      P+  T++ +I+G   +  +  A ++F+ +    C P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD-GFVDKA 243
           NVVT+ +LING C   +  +A + F+EM  +   +  P+VVTY ++I  L K+   ++KA
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEM--QLRDLV-PNVVTYTTLIRSLAKESSTLEKA 645

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWK----------EAKCLFIE----MMDNG 289
                 M      PN +T+N L+ GF      K              LF E    M  +G
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
                  +N+ +   C  G +       + M+++G +PD V++ +++ GFC+VG   + R
Sbjct: 706 WSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWR 765

Query: 350 EL-FVSMVSKG 359
            + F ++  KG
Sbjct: 766 NMDFCNLGEKG 776


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 156/526 (29%), Positives = 258/526 (49%), Gaps = 24/526 (4%)

Query: 25  SFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSF 84
           S+G  PN  T          T+I + L D  +       EA  FFD  + +       S+
Sbjct: 327 SYGCKPNAAT---------YTTIIQGLYDAQRM-----EEAKAFFDEALDV------ISY 366

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           T ++  LA +K+ D    LF++L + G  P++     +I+ L K G           +  
Sbjct: 367 TTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSG 426

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
           S   P   T+  +I+GLC    + +A ++F+++    C P+ +T+ TLI+G  +      
Sbjct: 427 SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDE 486

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A KL + M+ +     +P  VTY SI+ G CK   +++AKE++ QM++R   P +  + S
Sbjct: 487 ARKLLDVMLTKGP---EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 543

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+  +      +EA  +  EM   G  PDV+ + ++I+     G++ +   + + MI++G
Sbjct: 544 LLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 603

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD +TY +++  F  +G +  A E+   M   G   D ++YN L++   K ++V+ A 
Sbjct: 604 CAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF 663

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF-TFATYIDG 443
            +Y  M++  I+P+ +T+N L+ GLF+ G    A  L  +M   D VP +  ++   IDG
Sbjct: 664 GVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDG 723

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           L K G V EA   FQ + +        TY  LI  L K GR+  A KL   +   G  PD
Sbjct: 724 LGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPD 783

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           V   S +I  L     +D A D+  +M  + C P+EVT+  L RGF
Sbjct: 784 VQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 829



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/569 (26%), Positives = 264/569 (46%), Gaps = 34/569 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M  M   P + S+  +++ LA   + D     F  +  NG  PD+     L
Sbjct: 37  DKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTL 96

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK G      ++L + L+  F P+   +  +I+G C  G +    ++ +++    C
Sbjct: 97  IHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGC 155

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+   +  LI+ LC+      A +LFE M     + C  D VT+ ++I+ L   G +D+
Sbjct: 156 IPDAAAYFVLIDPLCKLGRVDEAYELFERMRK---SGCLGDYVTFMTLIEALSNHGKLDE 212

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL  +M +R   P +   +SLI   C      EA  ++  ++   V    V +N++++
Sbjct: 213 ACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMD 272

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++D   +LL  M++    PD  TYN L+ GF    R+  A ELF  + S GC+ 
Sbjct: 273 GYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKP 332

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREML--------------SERI------------- 395
           +  +Y  +I      Q++E+A   + E L              S+RI             
Sbjct: 333 NAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTA 392

Query: 396 --RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
              P+V+ Y  ++ GL + G + D LK  + M  +  VP   T+   IDGLCK   + +A
Sbjct: 393 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 452

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
            +VF+ +    C     TY  LI+G  K  ++  A KL   +  KGP P  VT  +++H 
Sbjct: 453 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 512

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
            CK   +++A +++  M  + C P    F +LL  ++   +  +   +L +M A +    
Sbjct: 513 FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTA-RGCAP 571

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           D+ L + ++DLL    +  E  + F  ++
Sbjct: 572 DVILYTSLIDLLFSTGRVPEARHVFDSMI 600



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 242/509 (47%), Gaps = 66/509 (12%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
            K +++ GL PD+   N+++N LCK      A  +   +      P  V++N +I+GL +
Sbjct: 8   LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV------------------- 204
             ++ EA + F  +    C+P+V+ F TLI+G C+     V                   
Sbjct: 68  IDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLY 127

Query: 205 ---------------ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                            K+ EEM+    A C PD   Y  +ID LCK G VD+A EL  +
Sbjct: 128 TSVIHGYCKAGDLDTGFKILEEML---AAGCIPDAAAYFVLIDPLCKLGRVDEAYELFER 184

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+      + +T+ +LI          EA  L+ EM++ G +P +   +++I   CK GK
Sbjct: 185 MRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGK 244

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+ N + + ++ + V    V YNSLMDG+C +GR+    +L + MV      D+ +YNI
Sbjct: 245 VDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNI 304

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ------------------ 411
           L+    +  +++DA+ L++ + S   +P+  TY T++ GL+                   
Sbjct: 305 LVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVI 364

Query: 412 -----VGNLGD------ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
                +  L D      A +L +K++     P+   +   IDGL K G + + ++ F+ +
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
               C     TY  +I+GLCK   L  ACK+F ++  KG +PD +T +T+I    K  +M
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           D+A  LL  M  K   P+ VT+ +++ GF
Sbjct: 485 DEARKLLDVMLTKGPEPTAVTYGSIVHGF 513



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 243/530 (45%), Gaps = 27/530 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   +  MI+    P +     L+  L K  + D    +++ + +  +       N L
Sbjct: 211 DEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSL 270

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK+G       +L +++     P+  T+N L+ G     R+ +A  LFK L+ + C
Sbjct: 271 MDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGC 330

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG------------------------- 217
            PN  T+ T+I GL   +    A   F+E ++                            
Sbjct: 331 KPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLK 390

Query: 218 -AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
            A C P+VV Y ++IDGL K G ++   +    M   +  P   TY  +I G C      
Sbjct: 391 TAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLP 450

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  +F +M+  G  PD +T+  +I+   K  KMD+  +LL++M+ +G  P  VTY S++
Sbjct: 451 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 510

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            GFC +  I+ A+E+   M  +GC   ++ +  L++      + E+A  +  EM +    
Sbjct: 511 HGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCA 570

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P VI Y +L+  LF  G + +A  + D M      PD+ T+ T I    K G V  A ++
Sbjct: 571 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 630

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
            + +           YN L++G  K+ R+  A  ++ R+   G  P+ VT + ++H L K
Sbjct: 631 LELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 690

Query: 517 EGQMDKANDLLLDMEAKNCVPSE-VTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +G+ D+A  L  +M  K+ VP   V++  L+ G  +  + S+      +M
Sbjct: 691 DGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEM 740



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 235/483 (48%), Gaps = 38/483 (7%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ V  N ++NGLC   +I +A  LF ++    C+P +V++NT+I+GL        A K 
Sbjct: 18  PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKF 77

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F  M++     C+PDV+ + ++I G CK G   +   +LL    +   P+V  Y S+I G
Sbjct: 78  FNSMIDNG---CEPDVIAFTTLIHGFCKAG-QPQVGHMLLNQALKRFRPDVFLYTSVIHG 133

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           +C   D      +  EM+  G  PD   +  +I+  CK G++D+   L E M + G   D
Sbjct: 134 YCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGD 193

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            VT+ +L++     G++  A EL+  M+ +G    +   + LI A CK  KV++A  +Y+
Sbjct: 194 YVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQ 253

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            ++++++  S + YN+L+ G  ++G + D LKL+ +M   D  PD  T+   + G  +  
Sbjct: 254 TVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRAN 313

Query: 449 FVLEAVQVFQAIRNCKCE-----------------------------LRIETYNCLINGL 479
            + +A+++F+ + +  C+                             L + +Y  +I GL
Sbjct: 314 RLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGL 373

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
               R+  AC+LF +L+  G  P+VV  + +I  L K G+++       DM   +CVP+ 
Sbjct: 374 ADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTR 433

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
            T+  ++ G  +         +  +M  +K  V D    + ++D  SK  K    +++ R
Sbjct: 434 TTYTVVIDGLCKAQMLPDACKVFEQM-VQKGCVPDTITYTTLIDGFSKASK----MDEAR 488

Query: 600 HLL 602
            LL
Sbjct: 489 KLL 491



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 212/436 (48%), Gaps = 17/436 (3%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           EA    K+++     P+VV  N ++NGLC+ R    A++LF EM +     C+P +V+YN
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPS---MGCEPTIVSYN 59

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++I GL     +D+A +    M D    P+VI + +LI GFC     +    L  + +  
Sbjct: 60  TVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR 119

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
             +PDV  + ++I+  CK G +D   ++LE M+  G  PD   Y  L+D  C +GR+  A
Sbjct: 120 -FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            ELF  M   GC  D  ++  LI A     K+++A  LYREM+     P +   ++L+  
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G + +A ++   +    V      + + +DG CK G V + +++   +  C     
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPD 298

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN---D 525
           I+TYN L+ G  +  RL  A +LF  L   G  P+  T +T+I  L    +M++A    D
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD 358

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
             LD+         +++ T+++G   + +  +   L  K+       + ++ ++ V+D L
Sbjct: 359 EALDV---------ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTA-VIDGL 408

Query: 586 SKDKKYRECLNQFRHL 601
            K  +  + L  F  +
Sbjct: 409 LKAGRIEDGLKNFEDM 424



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 190/396 (47%), Gaps = 4/396 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   F+ M++    P   ++T L+   +K  + D    L   + + G  P       ++
Sbjct: 451 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 510

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK+ + + A  V+ ++      P    F  L++   ++GR  EA ++  ++    C 
Sbjct: 511 HGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCA 570

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V+ + +LI+ L  T     A  +F+ M+ +    C PD +TY +II    K G V+ A
Sbjct: 571 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG---CAPDALTYGTIIQNFSKIGNVEAA 627

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E+L  M    + P+   YNSL+ G+  ++   +A  ++  M+ +G++P+ VTFN +++ 
Sbjct: 628 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 687

Query: 304 NCKDGKMDKVNRLLELMIQRG-VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             KDGK D+   L + M+++  V P  V+Y  L+DG    GR+S A   F  M+ +G   
Sbjct: 688 LFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIP 747

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           + ++Y  LI +  K  ++ +A  L  +M+   + P V  Y+ L++GL     +  A  + 
Sbjct: 748 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 807

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            +M      P+  T+     G    G  L+   V Q
Sbjct: 808 QEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQ 843



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 158/315 (50%), Gaps = 1/315 (0%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +++A + L +M    + P+V+  N ++ G C      +A  LF+EM   G +P +V++N 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+      KMD+  +    MI  G  PD + + +L+ GFC  G+  +   + ++   K 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            R DV+ Y  +I+  CK   ++    +  EML+    P    Y  L+  L ++G + +A 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +L ++M+ +  + D  TF T I+ L  +G + EA ++++ +     E  +E  + LI  L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK G++  A +++  +  K      V  ++++   CK G++D    LLL M   +  P  
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 540 VTFCTLLRGFVQNNK 554
            T+  L+ GF + N+
Sbjct: 300 QTYNILVAGFSRANR 314



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 3/222 (1%)

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A +    M + G   DV + NI++N  CK +K++ A+ L+ EM S    P++++YNT
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNC 463
           ++SGL  +  + +A K  + M  N   PD   F T I G CK G       +  QA++  
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           + ++ +  Y  +I+G CK G L T  K+   +   G IPD      +I  LCK G++D+A
Sbjct: 121 RPDVFL--YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +L   M    C+   VTF TL+     + K  +   L  +M
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREM 220


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 250/474 (52%), Gaps = 12/474 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+   + M  ++PS       ++  + A  +  +      +R+ ++   PD+   N +
Sbjct: 73  EEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEA-----RRVLAS-CEPDVMSYNAM 126

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +   C  G    A  ++  +      P+T T+N LI GLC  GR   A  +   +    C
Sbjct: 127 VAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGC 183

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VVT+  L+   C+      A+KL +EM ++    C PD+VTYN +++G+C++G VD 
Sbjct: 184 VPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKG---CAPDIVTYNVVVNGICQEGRVDD 240

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E L  +      PN ++YN ++ G C  + W++A+ L  EM   G  P+VVTFN +I+
Sbjct: 241 AMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLIS 300

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           + C+ G ++    +L+ + + G  P++++YN ++  FC   ++ RA      MVS GC  
Sbjct: 301 FLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYP 360

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ SYN L+ A C+  +V+ AV L  ++  +   P +I+YNT++ GL + G   +AL+L+
Sbjct: 361 DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELL 420

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M    + PD  T++T   GLC+ G + EA++ F  +++         YN ++ GLCK 
Sbjct: 421 NEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKR 480

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
               +A  LF  +   G +P+  T + +I  L  EG + +A +++ ++ ++  V
Sbjct: 481 RATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVV 534



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 227/429 (52%), Gaps = 11/429 (2%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI  LC  G T+ A     R+L SC  P+ +++N ++ G C  G++  A RL   + +  
Sbjct: 96  LIKKLCASGRTAEAR----RVLASC-EPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM-- 148

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +P+  T+NTLI GLC    T  AL + ++M+      C PDVVTY  +++  CK     
Sbjct: 149 -EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRG---CVPDVVTYTILLEATCKRSGYK 204

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A +LL +M+D+   P+++TYN ++ G C      +A      +   G +P+ V++N ++
Sbjct: 205 QAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVL 264

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C   + +   +L+  M ++G  P+ VT+N L+   C  G +  A E+   +   GC 
Sbjct: 265 KGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCT 324

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  SYN +++A CK +K++ A+     M+S    P +++YNTLL+ L + G +  A++L
Sbjct: 325 PNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVEL 384

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           + +++     P   ++ T IDGL K G   EA+++   +     +  I TY+ + +GLC+
Sbjct: 385 LHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCR 444

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            GR++ A K F ++Q  G  P+ V  + ++  LCK      A DL   M +  C+P+E T
Sbjct: 445 EGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNEST 504

Query: 542 FCTLLRGFV 550
           +  L+ G  
Sbjct: 505 YTILIEGLA 513



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 190/374 (50%), Gaps = 3/374 (0%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G   ++ A+   D M++    P + ++TILL    K   Y   V L   +   G  PD+ 
Sbjct: 164 GRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIV 223

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N+++N +C+ G    A   L  +      PNTV++N ++ GLC   R  +A +L  ++
Sbjct: 224 TYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 283

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           +     PNVVTFN LI+ LCR      A+++ ++ + ++G  C P+ ++YN I+   CK 
Sbjct: 284 SRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQ-IPKYG--CTPNSLSYNPILHAFCKQ 340

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             +D+A   +  M      P++++YN+L+   C   +   A  L  ++ D G  P ++++
Sbjct: 341 KKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISY 400

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +I+   K GK ++   LL  M+ +G+ PD +TY+++  G C  GRI  A + F  +  
Sbjct: 401 NTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQD 460

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            G R +   YN ++   CK +    A+ L+  M+S    P+  TY  L+ GL   G + +
Sbjct: 461 MGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKE 520

Query: 418 ALKLIDKMQLNDVV 431
           A +++ ++    VV
Sbjct: 521 AREMMAELCSRGVV 534



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 205/423 (48%), Gaps = 18/423 (4%)

Query: 181 ACDPNVVTF-----NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           A  PN V       N  +  L R  +   A++L E M     +   P      ++I  LC
Sbjct: 46  AVAPNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCA----ALIKKLC 101

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
             G   +A+ +L      +  P+V++YN+++ G+C       A+ L   M    ++PD  
Sbjct: 102 ASGRTAEARRVLA-----SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTY 153

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I   C  G+ D    +L+ M++RG  PD VTY  L++  C      +A +L   M
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM 213

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             KGC  D+ +YN+++N  C++ +V+DA+   + + S    P+ ++YN +L GL      
Sbjct: 214 RDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERW 273

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            DA KL+ +M      P+  TF   I  LC+ G V  A+++   I    C     +YN +
Sbjct: 274 EDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPI 333

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           ++  CK  ++  A      +   G  PD+V+ +T++  LC+ G++D A +LL  ++ K C
Sbjct: 334 LHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 393

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            P  +++ T++ G  +  K  + + LL++M  + L   D+   S +   L ++ +  E +
Sbjct: 394 TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGL-QPDIITYSTISSGLCREGRIEEAI 452

Query: 596 NQF 598
             F
Sbjct: 453 KAF 455


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 179/630 (28%), Positives = 290/630 (46%), Gaps = 89/630 (14%)

Query: 38  SHHFKDGT--SIAKFLNDR-----------HKSGNITSNEAVY----FFDCMIKMKPSPG 80
           SH ++ GT  ++A+ L D            H   +  S EA+     F D + +     G
Sbjct: 120 SHSYRPGTFAALARRLVDARRYAAAGRARIHLIKSCHSKEAMARTMSFLDMLSQSGLRMG 179

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + +++ LL  L++      V+  + R+ S G+ P+L + N +IN LCK G  + A  ++ 
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 239

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           ++  S  +P+T T+  +I G C +  +  A ++F ++    C+PN VT++TLINGLC + 
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299

Query: 201 NTLVALKLFEEMVNE---------FGAI-----------------------CKPDVVTYN 228
               A  L  EM+            G I                       C+P+V TY 
Sbjct: 300 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359

Query: 229 SIIDGLCKDGFVDKAKELLLQM--------------------KDRNI------------- 255
           ++I GLC  G +  A  L  +M                    ++R I             
Sbjct: 360 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 256 --NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
             +PN++TYN +I G+C + D K+A  +   M+  G   ++VT+N +I   C  G     
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
            R+L+LM   G  PD  +Y  L+ GFC + ++  A  LF  MV  G   +  +Y  LI+ 
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CKD+K++ A  L   M     RP+V TYN L+ GL +  N   A +L   M    + P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   IDGLCKNG    A+++F  +    C   + TY+ LI  L + G+++ A  LF 
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            L+  G IPD +T   MI      G+++ A + L  M    C P+  T+  L++G     
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL---- 715

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            K++ ++   ++AA   VV + S   +  D
Sbjct: 716 -KNEYLLADQRLAALPDVVPNCSFGYQTTD 744



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 242/543 (44%), Gaps = 64/543 (11%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+  F  M +    P   ++  L+ +L +N++      +   +  NG  P++   N +I 
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C +G    A +V+  +L+   + N VT+N +I G C  G    A R+   +    C P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +  ++  LI G C+      A  LF EMV++   +C P+ VTY ++IDG CKD  +D A 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDD--GLC-PNEVTYTALIDGYCKDEKLDTAT 550

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            LL  MK     PNV TYN LI G    +++  A+ L   M++ G+ P+VVT+ AMI+  
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 305 CK-----------------------------------DGKMDKVNRLLELMIQRGVNPDT 329
           CK                                   +GK+++   L   + + G+ PD 
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN-----CKDQKV---- 380
           +TY  +++ + + G++  A      M+  GC+  +++Y +LI          DQ++    
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730

Query: 381 --------------EDAVCLYREMLSERIRP--SVITYNTLLSGLFQVGNLGDALKLIDK 424
                         +DAV +    L+E + P  SV   N L+S L   G   +A +L+  
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQNALVSNLSTAGRWFEANELLGS 789

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    + PD   + + +  L +   V  A+ VF+ +    CE+ +  Y  LI  LC++ R
Sbjct: 790 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 849

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
            K A   F  +  +   PD V  + +I  L ++G  D   + L  ME +  +PS   +  
Sbjct: 850 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTI 909

Query: 545 LLR 547
           L R
Sbjct: 910 LAR 912



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 198/405 (48%), Gaps = 3/405 (0%)

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C ++  +     F +M+++ G   +  +  Y++++  L + G      +   +M    + 
Sbjct: 155 CHSKEAMARTMSFLDMLSQSG--LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQ 212

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN++ YN++I   C   +  +A+ +  ++ ++ + PD  T+ +MI  +C+   +D   ++
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M + G  P+TVTY++L++G C  GR++ A +L   M+  G     ++    I A C 
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
               EDA  L+ +M ++   P+V TY  L+SGL   G L  A+ L  +M  + V P++ T
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   I+ L +N  +  A  V   +    C   I TYN +I G C +G  K A  + + + 
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +G   ++VT +T+I   C  G    A  +L  M    C P E ++  L+ GF + +K  
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
               L ++M  + L  ++++ ++ ++D   KD+K     +   H+
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTA-LIDGYCKDEKLDTATSLLEHM 556


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 251/501 (50%), Gaps = 4/501 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
            +   D M+++  SP   + + L+  L K  + D    L  ++   G  P+LFV N LIN
Sbjct: 314 GIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALIN 373

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK G    A ++   +      PN +T++ LI+  C  GR+  A   F ++       
Sbjct: 374 SLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGE 433

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
            V  +N+LING C+  +   A  LF EM N+     +P   T+ S+I G CKD  V KA 
Sbjct: 434 TVYAYNSLINGQCKFGDLSAAESLFIEMTNKG---VEPTATTFTSLISGYCKDLQVQKAF 490

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  +M D  I PNV T+ +LI G C  +   EA  LF E+++  ++P  VT+N +I   
Sbjct: 491 KLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGY 550

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C+DGK+DK   LLE M Q+G+ PDT TY  L+ G C  GR+S+A++    +  +  + + 
Sbjct: 551 CRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNE 610

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y+ L++  C++ ++ +A+    EM+   I   ++ +  L+ G  +  +      L+  
Sbjct: 611 MCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKD 670

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    + PD+  + + ID   K G   +A + +  +   +C   + TY  L+NGLCK G 
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGE 730

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +  A  LF R+Q     P+ +T    +  L KEG M +A  L   M  K  + + VT   
Sbjct: 731 MDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM-LKGLLANTVTHNI 789

Query: 545 LLRGFVQNNKKSKVVVLLHKM 565
           ++RGF +  +  +   +L +M
Sbjct: 790 IIRGFCKLGRFHEATKVLSEM 810



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 158/531 (29%), Positives = 263/531 (49%), Gaps = 6/531 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K G++   E +Y    ++ ++P+ G+T ++IL+    ++ + D  +S F R+  
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPN-GIT-YSILIDSFCRSGRLDVAISYFDRMIQ 428

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           +G+   ++  N LIN  CK G  S A  +   +      P   TF  LI+G C + ++ +
Sbjct: 429 DGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQK 488

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A +L+ K+      PNV TF  LI+GLC T     A +LF+E+V       KP  VTYN 
Sbjct: 489 AFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVER---KIKPTEVTYNV 545

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+G C+DG +DKA ELL  M  + + P+  TY  LI G C      +AK    ++    
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQN 605

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           V+ + + ++A+++  C++G++ +       MIQRG+N D V +  L+DG           
Sbjct: 606 VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFF 665

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   M  +G R D   Y  +I+   K+   + A   +  M++E   P+V+TY  L++GL
Sbjct: 666 DLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGL 725

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            + G +  A  L  +MQ  +V P+S T+  ++D L K G + EA+ +  A+        +
Sbjct: 726 CKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTV 785

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            T+N +I G CK+GR   A K+   +   G  PD VT ST+I+  C+ G +  +  L   
Sbjct: 786 -THNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDT 844

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           M  +   P  V +  L+ G   N +  K   L   M    ++  +  L  K
Sbjct: 845 MLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKYLQKK 895



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 160/608 (26%), Positives = 275/608 (45%), Gaps = 72/608 (11%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV     M      P + + + LL  L K +++ TV  LF    + G+ PD +  + ++
Sbjct: 173 DAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVV 232

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             +C++     A   +  +  + F  + VT+N LI+GLC   R+ EA  + + L      
Sbjct: 233 RSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLA 292

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMV------------------------------ 213
            +VVT+ TL+ G CR +     ++L +EMV                              
Sbjct: 293 ADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYEL 352

Query: 214 ----NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                 FG +  P++  YN++I+ LCK G +DKA+ L   M   N+ PN ITY+ LI  F
Sbjct: 353 VVKVGRFGFV--PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSF 410

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C       A   F  M+ +G+   V  +N++IN  CK G +     L   M  +GV P  
Sbjct: 411 CRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTA 470

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            T+ SL+ G+C   ++ +A +L+  M+  G   +VY++  LI+  C   K+ +A  L+ E
Sbjct: 471 TTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDE 530

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           ++  +I+P+ +TYN L+ G  + G +  A +L++ M    +VPD++T+   I GLC  G 
Sbjct: 531 LVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGR 590

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA----CKLFHR----------- 494
           V +A      +     +L    Y+ L++G C+ GRL  A    C++  R           
Sbjct: 591 VSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAV 650

Query: 495 --------------------LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
                               +  +G  PD V  ++MI    KEG   KA +    M  + 
Sbjct: 651 LIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEE 710

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           C P+ VT+  L+ G  +  +  +  +L  +M A  +  + ++     +D L+K+   +E 
Sbjct: 711 CFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGC-FLDNLTKEGNMKEA 769

Query: 595 LNQFRHLL 602
           +     +L
Sbjct: 770 IGLHHAML 777



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 239/488 (48%), Gaps = 4/488 (0%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           +F D   + K S  +    ++   +  ++ +D VV + K + +N L P++  L+ L+N L
Sbjct: 142 HFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVV-IVKLMFANNLLPEVRTLSALLNGL 200

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
            K+      + +    + +   P+  T + ++  +C     + A    + +     D ++
Sbjct: 201 LKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSI 260

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           VT+N LI+GLC+      A+++   +    G     DVVTY +++ G C+    +   +L
Sbjct: 261 VTYNVLIHGLCKGDRVSEAVEVKRSLG---GKGLAADVVTYCTLVLGFCRLQQFEAGIQL 317

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           + +M +   +P     + L+ G        +A  L +++   G  P++  +NA+IN  CK
Sbjct: 318 MDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCK 377

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G +DK   L   M    + P+ +TY+ L+D FC  GR+  A   F  M+  G    VY+
Sbjct: 378 GGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYA 437

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN LIN  CK   +  A  L+ EM ++ + P+  T+ +L+SG  +   +  A KL +KM 
Sbjct: 438 YNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMI 497

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            N + P+ +TF   I GLC    + EA ++F  +   K +    TYN LI G C+ G++ 
Sbjct: 498 DNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKID 557

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +L   +  KG +PD  T   +I  LC  G++ KA D + D+  +N   +E+ +  LL
Sbjct: 558 KAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALL 617

Query: 547 RGFVQNNK 554
            G+ Q  +
Sbjct: 618 HGYCQEGR 625


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 246/474 (51%), Gaps = 7/474 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++T L+    KN   D    +F R+  +G  P+    + LIN LC  G    A  +
Sbjct: 235 PDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDM 294

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  ++     P    +   I  LC  GR  EA +L  K+    C PNV T+  LI+GL R
Sbjct: 295 LEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSR 354

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                VA+ ++ +M+ + G +  P  VTY+++I+ L  +G  + A  +   M   +  PN
Sbjct: 355 DGKFEVAIGVYHKMLAD-GLV--PTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPN 411

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             TYN +I GFC +   ++A  +F +M+  G  P+V+T+N +I+   K G M+   RLLE
Sbjct: 412 TETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLE 471

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           +M   G+  DT TY +L+ GF   G++  A  LF  MV  G   +V +YN +IN      
Sbjct: 472 MMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVA 531

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           KV+DA+ L+ +M+     PS  TYN ++SG  +   + +A     KM    ++P+  T+ 
Sbjct: 532 KVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYT 591

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           ++IDGLCKNG    A ++F  ++       + TY+ LI+GLC+ G+ + A     RL   
Sbjct: 592 SFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDD 647

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           G  P+V T +T++  LC +G+  +A+ L+  M+ K   PSE  +  LL G  +N
Sbjct: 648 GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKN 701



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/504 (30%), Positives = 241/504 (47%), Gaps = 7/504 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+   + MI     P + ++TI +  L    +    V L  ++   G  P++     LI
Sbjct: 290 EAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALI 349

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L + G    A  V  ++L     P  VT++ LIN L  EGR   A  +F+ +      
Sbjct: 350 SGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSL 409

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T+N +I G C       A  +F++M+    A   P+V+TYN II    K G+++ A
Sbjct: 410 PNTETYNVIIKGFCSIGYIQKATAIFDQMLK---AGPSPNVITYNIIIHIYFKQGYMNNA 466

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL  MK   +  +  TY +LI GF      + A  LF EM+++G+ P+VVT+NA+IN 
Sbjct: 467 MRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIING 526

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
                K+D    L   M++ G  P + TYN ++ GF    RIS A      MV +G   +
Sbjct: 527 YLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPN 586

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +Y   I+  CK+ +   A  ++ EM      P++ TY++L+ GL Q G   DA +L+D
Sbjct: 587 VITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD 646

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
               +   P+  T+ T + GLC  G   EA Q+ ++++    +   E Y  L+ G CK  
Sbjct: 647 ----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNL 702

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +++A K+F  +   G  P +     +I  LCK     KA  +   M  K+    EV + 
Sbjct: 703 EVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWT 762

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAA 567
            LL G ++  +    + LLH M +
Sbjct: 763 VLLDGLLKEGETDLSLELLHVMES 786



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 252/546 (46%), Gaps = 78/546 (14%)

Query: 100 VVSLFKRLNSNGLFP-DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLI 158
           V+ +   +N+   F   L+  + L+  L K  +      V   +L S   PN  TFN +I
Sbjct: 150 VIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMI 209

Query: 159 NGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
             LC +G++ EA  +   +  +   P+  T+ +LI G C+  N  +A ++F+ MV +   
Sbjct: 210 KILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDG-- 267

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI----------------------- 255
            C P+ VTY+++I+GLC +G +++A ++L +M D+ I                       
Sbjct: 268 -CDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEA 326

Query: 256 ------------NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
                        PNV TY +LI G      ++ A  ++ +M+ +G+ P  VT++A+IN 
Sbjct: 327 VKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQ 386

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
              +G+ +    + E M+     P+T TYN ++ GFC +G I +A  +F  M+  G   +
Sbjct: 387 LYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPN 446

Query: 364 VYSYNI-----------------------------------LINANCKDQKVEDAVCLYR 388
           V +YNI                                   LI+   +  K+E A  L+ 
Sbjct: 447 VITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFN 506

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM+   I P+V+TYN +++G   V  + DAL L  KM  +  VP S T+   I G  K  
Sbjct: 507 EMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTN 566

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EA      +        + TY   I+GLCK GR   A K+FH ++ +   P++ T S
Sbjct: 567 RISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYS 626

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           ++I  LC+EGQ + A  LL D     C P+  T+ TL+RG     +  +   L+  M  +
Sbjct: 627 SLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKK 682

Query: 569 KLVVSD 574
            L  S+
Sbjct: 683 GLQPSE 688



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 243/473 (51%), Gaps = 7/473 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV     M K    P + ++T L++ L+++ +++  + ++ ++ ++GL P     + LI
Sbjct: 325 EAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALI 384

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N L   G    A  +   +L     PNT T+N +I G C+ G I +A  +F ++      
Sbjct: 385 NQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPS 444

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNV+T+N +I+   +      A++L E M    G   K D  TY ++I G  + G ++ A
Sbjct: 445 PNVITYNIIIHIYFKQGYMNNAMRLLEMMK---GNGLKLDTWTYANLISGFSRGGKLEHA 501

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L  +M +  I+PNV+TYN++I G+  V    +A  LF +M+++G  P   T+N MI+ 
Sbjct: 502 FSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISG 561

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K  ++ +       M+++G+ P+ +TY S +DG C  GR S A ++F  M  +    +
Sbjct: 562 FSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPN 621

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +Y+ LI+  C++ + EDA      +L +   P+V TY TL+ GL   G   +A +L++
Sbjct: 622 LCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVE 677

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M+   + P    +   + G CKN  V  A+++F ++     +  +  Y  LI  LCK  
Sbjct: 678 SMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKAN 737

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
             + A  +F  +  K    D V  + ++  L KEG+ D + +LL  ME++NC 
Sbjct: 738 FRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCT 790



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 153/318 (48%), Gaps = 9/318 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + A  ++   + G +    A   F+ M++   SP + ++  ++       + D  ++
Sbjct: 481 DTWTYANLISGFSRGGKL--EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALA 538

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF ++  +G  P     N++I+   K    S A    G++++    PN +T+   I+GLC
Sbjct: 539 LFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GR   A ++F ++      PN+ T+++LI+GLC+      A +L ++        C+P
Sbjct: 599 KNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDG-------CEP 651

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +V TY +++ GLC  G   +A +L+  MK + + P+   Y +L+ G C   + + A  +F
Sbjct: 652 NVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIF 711

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M+  G QP +  + A+I   CK     K   + + M+++  N D V +  L+DG    
Sbjct: 712 DSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKE 771

Query: 343 GRISRARELFVSMVSKGC 360
           G    + EL   M S+ C
Sbjct: 772 GETDLSLELLHVMESRNC 789



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 114/217 (52%), Gaps = 1/217 (0%)

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           +Y EML+  IRP++ T+N ++  L   G + +A  ++  +      PD+FT+ + I G C
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           KNG +  A ++F  +    C+    TY+ LINGLC  GRL+ A  +   +  KG  P V 
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             +  I  LC  G+  +A  LL  M+ + C P+  T+  L+ G  ++ K    + + HKM
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            A+ LV + ++ S+ +++ L  + ++   L  F  +L
Sbjct: 369 LADGLVPTAVTYSA-LINQLYVEGRFETALTIFEWML 404


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 179/630 (28%), Positives = 290/630 (46%), Gaps = 89/630 (14%)

Query: 38  SHHFKDGT--SIAKFLNDR-----------HKSGNITSNEAVY----FFDCMIKMKPSPG 80
           SH ++ GT  ++A+ L D            H   +  S EA+     F D + +     G
Sbjct: 120 SHSYRPGTFAALARRLVDARRYAAAGRARIHLIKSCHSKEAMARTMSFLDMLSQSGLRMG 179

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + +++ LL  L++      V+  + R+ S G+ P+L + N +IN LCK G  + A  ++ 
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 239

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           ++  S  +P+T T+  +I G C +  +  A ++F ++    C+PN VT++TLINGLC + 
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299

Query: 201 NTLVALKLFEEMVNE---------FGAI-----------------------CKPDVVTYN 228
               A  L  EM+            G I                       C+P+V TY 
Sbjct: 300 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359

Query: 229 SIIDGLCKDGFVDKAKELLLQM--------------------KDRNI------------- 255
           ++I GLC  G +  A  L  +M                    ++R I             
Sbjct: 360 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 256 --NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
             +PN++TYN +I G+C + D K+A  +   M+  G   ++VT+N +I   C  G     
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
            R+L+LM   G  PD  +Y  L+ GFC + ++  A  LF  MV  G   +  +Y  LI+ 
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CKD+K++ A  L   M     RP+V TYN L+ GL +  N   A +L   M    + P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   IDGLCKNG    A+++F  +    C   + TY+ LI  L + G+++ A  LF 
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            L+  G IPD +T   MI      G+++ A + L  M    C P+  T+  L++G     
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL---- 715

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            K++ ++   ++AA   VV + S   +  D
Sbjct: 716 -KNEYLLADQRLAALPDVVPNCSFGYQTTD 744



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 242/543 (44%), Gaps = 64/543 (11%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+  F  M +    P   ++  L+ +L +N++      +   +  NG  P++   N +I 
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C +G    A +V+  +L+   + N VT+N +I G C  G    A R+   +    C P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +  ++  LI G C+      A  LF EMV++   +C P+ VTY ++IDG CKD  +D A 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDD--GLC-PNEVTYTALIDGYCKDEKLDTAT 550

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            LL  MK     PNV TYN LI G    +++  A+ L   M++ G+ P+VVT+ AMI+  
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 305 CK-----------------------------------DGKMDKVNRLLELMIQRGVNPDT 329
           CK                                   +GK+++   L   + + G+ PD 
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN-----CKDQKV---- 380
           +TY  +++ + + G++  A      M+  GC+  +++Y +LI          DQ++    
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730

Query: 381 --------------EDAVCLYREMLSERIRP--SVITYNTLLSGLFQVGNLGDALKLIDK 424
                         +DAV +    L+E + P  SV   N L+S L   G   +A +L+  
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQNALVSNLSTAGRWFEANELLGS 789

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    + PD   + + +  L +   V  A+ VF+ +    CE+ +  Y  LI  LC++ R
Sbjct: 790 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 849

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
            K A   F  +  +   PD V  + +I  L ++G  D   + L  ME +  +PS   +  
Sbjct: 850 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTI 909

Query: 545 LLR 547
           L R
Sbjct: 910 LAR 912



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 198/405 (48%), Gaps = 3/405 (0%)

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C ++  +     F +M+++ G   +  +  Y++++  L + G      +   +M    + 
Sbjct: 155 CHSKEAMARTMSFLDMLSQSG--LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQ 212

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN++ YN++I   C   +  +A+ +  ++ ++ + PD  T+ +MI  +C+   +D   ++
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M + G  P+TVTY++L++G C  GR++ A +L   M+  G     ++    I A C 
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
               EDA  L+ +M ++   P+V TY  L+SGL   G L  A+ L  +M  + V P++ T
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   I+ L +N  +  A  V   +    C   I TYN +I G C +G  K A  + + + 
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +G   ++VT +T+I   C  G    A  +L  M    C P E ++  L+ GF + +K  
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
               L ++M  + L  ++++ ++ ++D   KD+K     +   H+
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTA-LIDGYCKDEKLDTATSLLEHM 556


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 152/474 (32%), Positives = 243/474 (51%), Gaps = 6/474 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            E   F + M      P + + T L+    K  +      +   L  +G   D    N+L
Sbjct: 86  EEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVL 145

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G    A  VL     +   PN  T++ ++  LC  G++ +A ++  +     C
Sbjct: 146 INAYCKSGEIEEALRVLDH---TSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKC 202

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VVT   LI+  C+      A+KLF EM    G  CKPDVVTYN +I G CK+G +D+
Sbjct: 203 YPDVVTCTVLIDATCKESGVGQAMKLFNEM---RGKGCKPDVVTYNVLIKGFCKEGRLDE 259

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A   L ++       +VI++N ++   C    W +A  L   M+  G  P VVTFN +IN
Sbjct: 260 AIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILIN 319

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           + C+ G + K   +LE+M + G  P++ ++N L+ GFC    I RA E    MVS+GC  
Sbjct: 320 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYP 379

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +YNIL+ A CKD KV+DAV +  ++ S+   PS+I+YNT++ GL +VG    A++L+
Sbjct: 380 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 439

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M    + PD  T  + + GL + G V EA++ F  ++    +     YN ++ GLCK 
Sbjct: 440 EEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKA 499

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            +   A      +   G  P   + +T+I  +  EG  ++A+ L  ++ ++  V
Sbjct: 500 QQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLV 553



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 239/490 (48%), Gaps = 10/490 (2%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L  L +N + +      + + + G  PD+     LI   CK+G T  A  ++G +  S  
Sbjct: 76  LCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGA 135

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
             +  ++N LIN  C  G I EA R+    +V    PN  T++ ++  LC       A++
Sbjct: 136 VIDANSYNVLINAYCKSGEIEEALRVLDHTSV---APNAATYDAVLCSLCDRGKLKQAMQ 192

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           + +  +    + C PDVVT   +ID  CK+  V +A +L  +M+ +   P+V+TYN LI 
Sbjct: 193 VLDRQLQ---SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIK 249

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GFC      EA     ++   G Q DV++ N ++   C  G+     +LL  M+++G  P
Sbjct: 250 GFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFP 309

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             VT+N L++  C  G + +A  +   M   G   +  S+N LI   C  + ++ A+   
Sbjct: 310 SVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHL 369

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             M+S    P ++TYN LL+ L + G + DA+ ++ ++      P   ++ T IDGL K 
Sbjct: 370 EIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKV 429

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNC--LINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           G    AV++ + +  C   L+ +   C  ++ GL + G++  A K FH L+  G  P+  
Sbjct: 430 GKAELAVELLEEM--CYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAF 487

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             ++++  LCK  Q   A D L+DM A  C P+E ++ TL++G        +   L +++
Sbjct: 488 IYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNEL 547

Query: 566 AAEKLVVSDL 575
            +  LV   L
Sbjct: 548 YSRGLVKKSL 557



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 211/413 (51%), Gaps = 12/413 (2%)

Query: 193 INGLCR-TRNTLV--ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           I+ LCR  RN  +    +  E M N+ G I  PDVV   ++I   CK G    A  ++  
Sbjct: 73  IHHLCRLIRNGELEEGSRFLEYMTNK-GKI--PDVVACTALIREFCKIGRTKNATRIMGI 129

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDG 308
           +++     +  +YN LI  +C   + +EA    + ++D+  V P+  T++A++   C  G
Sbjct: 130 LEESGAVIDANSYNVLINAYCKSGEIEEA----LRVLDHTSVAPNAATYDAVLCSLCDRG 185

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           K+ +  ++L+  +Q    PD VT   L+D  C    + +A +LF  M  KGC+ DV +YN
Sbjct: 186 KLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYN 245

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           +LI   CK+ ++++A+   +++ S   +  VI++N +L  L   G   DA+KL+  M   
Sbjct: 246 VLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRK 305

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
              P   TF   I+ LC+ G + +A+ V + +          ++N LI G C    +  A
Sbjct: 306 GCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRA 365

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +    +  +G  PD+VT + ++  LCK+G++D A  +L  + +K C PS +++ T++ G
Sbjct: 366 IEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDG 425

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            ++  K    V LL +M  + L   DL   + VV  LS++ K  E +  F +L
Sbjct: 426 LLKVGKAELAVELLEEMCYKGL-KPDLITCTSVVGGLSREGKVHEAIKFFHYL 477



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 181/372 (48%), Gaps = 3/372 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D  ++ K  P + + T+L+    K       + LF  +   G  PD+   N+LI
Sbjct: 189 QAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLI 248

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CK G    A + L ++       + ++ N ++  LC+ GR M+A +L   +    C 
Sbjct: 249 KGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCF 308

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VVTFN LIN LC+      AL + E M+ + G    P+  ++N +I G C    +D+A
Sbjct: 309 PSVVTFNILINFLCQKGLLGKALNVLE-MMPKHGHT--PNSRSFNPLIQGFCNRKGIDRA 365

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E L  M  R   P+++TYN L+   C      +A  +  ++   G  P ++++N +I+ 
Sbjct: 366 IEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDG 425

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K GK +    LLE M  +G+ PD +T  S++ G    G++  A + F  +   G + +
Sbjct: 426 LLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPN 485

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            + YN ++   CK Q+   A+    +M++   +P+  +Y TL+ G+   G   +A KL +
Sbjct: 486 AFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSN 545

Query: 424 KMQLNDVVPDSF 435
           ++    +V  S 
Sbjct: 546 ELYSRGLVKKSL 557


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 271/514 (52%), Gaps = 8/514 (1%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           L S+ F++ T + K LN   K+G    NE++YF +C++    +P +   T L+      K
Sbjct: 71  LQSYDFRE-THLMKLLNRSCKAGKF--NESLYFLECLVNKGYTPDVILCTKLIKGFFNFK 127

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
             +    + + L S+   PD+F  N +I+  CK+     A  VL R+    F P+ VT+N
Sbjct: 128 NIEKASRVMEILESH-TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYN 186

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I  LC   ++  A  +  +L +  C P V+T+  LI           A+KL EEM+  
Sbjct: 187 IMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR 246

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            G +  PD+ TYN+II G+CK+G V++A EL+  +  +   P+VI+YN L+  F     W
Sbjct: 247 -GLL--PDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKW 303

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            E + L  EM   G +P+ VT++ +I+  C+ G++D+   +L++MI++ + PDT +Y+ L
Sbjct: 304 DEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPL 363

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +   C  GR+  A  +   M+S GC  D+ +YN ++ A CK+     A+ ++ ++     
Sbjct: 364 ISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGC 423

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P+V +YNT++S L+  G+   AL ++  M    + PD  T+ + I  LC++G V EA+ 
Sbjct: 424 PPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIG 483

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +   +        + +YN ++ GLCK+ R+  A  +F  +  KG  P+  T   +I  + 
Sbjct: 484 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIG 543

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
             G   +A +L   + +++ + S+ +F  L + F
Sbjct: 544 FAGWRTEAMELANSLFSRDVI-SQDSFKRLNKTF 576



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 228/444 (51%), Gaps = 4/444 (0%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N  CK G  + +   L  ++   +TP+ +    LI G      I +A+R+ + L    
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +P+V  +N +I+G C+      A ++   M    G +  PD+VTYN +I  LC    + 
Sbjct: 144 -EPDVFAYNAVISGFCKVNQIEAATQVLNRM-KARGFL--PDIVTYNIMIGSLCNRRKLG 199

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  +L Q+   N  P VITY  LI          EA  L  EM+  G+ PD+ T+NA+I
Sbjct: 200 LALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 259

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              CK+G +++   L+  +  +G  PD ++YN L+  F   G+     +L   M S+GC 
Sbjct: 260 RGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 319

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  +Y+ILI++ C+  ++++A+ + + M+ + + P   +Y+ L+S L + G L  A+ +
Sbjct: 320 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 379

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +D M  N  +PD   + T +  LCKNG   +A+++F  +R   C   + +YN +I+ L  
Sbjct: 380 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 439

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G    A  +   +  KG  PD +T +++I  LC++G +++A  LL DME     P+ ++
Sbjct: 440 CGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVIS 499

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
           +  +L G  +  +    + +  +M
Sbjct: 500 YNIVLLGLCKVRRIDDAIGMFAEM 523



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 199/404 (49%), Gaps = 5/404 (1%)

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+N  C+      +L   E +VN+      PDV+    +I G      ++KA  ++ ++ 
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKG---YTPDVILCTKLIKGFFNFKNIEKASRVM-EIL 139

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           + +  P+V  YN++I GFC V+  + A  +   M   G  PD+VT+N MI   C   K+ 
Sbjct: 140 ESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 199

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               +L+ ++     P  +TY  L++   + G I+ A +L   M+++G   D+Y+YN +I
Sbjct: 200 LALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 259

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              CK+  VE A  L   + S+   P VI+YN LL      G   +  KL+ +M      
Sbjct: 260 RGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 319

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  T++  I  LC+ G + EA+ V + +   +      +Y+ LI+ LCK GRL  A  +
Sbjct: 320 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 379

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              +   G +PD+V  +T++  LCK G  ++A ++   +    C P+  ++ T++     
Sbjct: 380 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 439

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
              +S+ + ++  M ++ +   +++ +S ++  L +D    E +
Sbjct: 440 CGDRSRALGMVPAMISKGIDPDEITYNS-LISCLCRDGLVEEAI 482


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 276/553 (49%), Gaps = 24/553 (4%)

Query: 34  TDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK 93
           TD  +  F +  ++   LN   K GN+    A  FF  +++ +P P + ++T L+    +
Sbjct: 179 TDNGNSVFPNLITLNTMLNSYCKLGNMAV--ARLFFVRILRCEPGPDLFTYTSLVLGYCR 236

Query: 94  NKQYDTVVSLF---KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
           N   +    +F    R N+            LI+ LC+ G    A     R+      P 
Sbjct: 237 NDDVERACGVFCVMPRRNA-------VSYTNLIHGLCEAGKLHEALEFWARMREDGCFPT 289

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
             T+  L+  LC  GR +EA  LF ++    C+PNV T+  LI+ LC+      ALK+  
Sbjct: 290 VRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLN 349

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           EMV +  A   P VV +N++I   CK G ++ A  +L  M+ + + PNV TYN LICGFC
Sbjct: 350 EMVEKGVA---PSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFC 406

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                  A  L  +M+++ + PDVVT+N +I+  C+ G +D  +RL  LMI+ G +PD  
Sbjct: 407 RGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQW 466

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           T+N+ M   C +GR+  A ++  S+  K  + + ++Y  LI+  CK  K+E A  L++ M
Sbjct: 467 TFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRM 526

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           L+E   P+ IT+N ++ GL + G + DA+ L++ M   DV P   T+   ++ + K    
Sbjct: 527 LAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDF 586

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             A ++   + +   +  + TY   I   C  GRL+ A ++  +++++G + D    + +
Sbjct: 587 DRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLL 646

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           I+     G +D A  +L  M    C PS +T+  L++          +V+  HK      
Sbjct: 647 INAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMK---------HLVIEKHKKEGSNP 697

Query: 571 VVSDLSLSSKVVD 583
           V  D+SL++  VD
Sbjct: 698 VGLDVSLTNISVD 710



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/533 (29%), Positives = 267/533 (50%), Gaps = 31/533 (5%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPG 80
           NF+    R  N    L++HH     S+   L  RH++     N      + MIK   SP 
Sbjct: 71  NFFRWIRRHHNFPHSLATHH-----SLLLLL-VRHRTLRAAEN----VRNSMIKSCTSPH 120

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
             +F  LL +L   ++ +T  +     +       L   N L+ CL +  +      +  
Sbjct: 121 DATF--LLNLL---RRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYK 175

Query: 141 RIL----RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP--NVVTFNTLIN 194
            +L     S F PN +T N ++N  C  G  M  ARLF  + +  C+P  ++ T+ +L+ 
Sbjct: 176 EMLTDNGNSVF-PNLITLNTMLNSYCKLGN-MAVARLFF-VRILRCEPGPDLFTYTSLVL 232

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G CR  +        E     F  + + + V+Y ++I GLC+ G + +A E   +M++  
Sbjct: 233 GYCRNDDV-------ERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDG 285

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             P V TY  L+C  C      EA  LF EM + G +P+V T+  +I+Y CK+G+MD+  
Sbjct: 286 CFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEAL 345

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           ++L  M+++GV P  V +N+L+  +C  G +  A  +   M SK    +V +YN LI   
Sbjct: 346 KMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGF 405

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C+ + ++ A+ L  +M+  ++ P V+TYNTL+ GL +VG +  A +L   M  +   PD 
Sbjct: 406 CRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQ 465

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           +TF  ++  LC+ G V EA Q+ ++++    +     Y  LI+G CK G+++ A  LF R
Sbjct: 466 WTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKR 525

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           +  +  +P+ +T + MI  L KEG++  A  L+ DM   +  P+  T+  L+ 
Sbjct: 526 MLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVE 578



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 250/554 (45%), Gaps = 67/554 (12%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  F  M +    P + ++T+L+  L K  + D  + +   +   G+ P +   N LI
Sbjct: 308 EALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALI 367

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CK G+   A  VLG +      PN  T+N LI G C    +  A  L  K+      
Sbjct: 368 GSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLS 427

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VVT+NTLI+GLC       A +LF  M+ +  +   PD  T+N+ +  LC+ G V +A
Sbjct: 428 PDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFS---PDQWTFNAFMVCLCRMGRVGEA 484

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ++L  +K++++  N   Y +LI G+C     + A  LF  M+     P+ +TFN MI+ 
Sbjct: 485 HQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDG 544

Query: 304 NCKDGKM-----------------------------------DKVNRLLELMIQRGVNPD 328
             K+GK+                                   D+ N +L  +I  G  P+
Sbjct: 545 LRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPN 604

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            VTY + +  +C  GR+  A E+ + + ++G   D + YN+LINA      ++ A  + R
Sbjct: 605 VVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLR 664

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID-KMQLNDVVPDSFTFATYIDGLCKN 447
            M      PS +TY+ L+  L    +  +    +   + L ++  D+    + ID     
Sbjct: 665 RMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKID----- 719

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
            F +  V +F+ +  C C   + TY+ LINGLCK+GRL  A  L+H ++  G  P  +  
Sbjct: 720 -FGITTV-LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIH 777

Query: 508 STMIHWLCKEGQMDKANDLLLDM--------------------EAKNCVPSEVTFCTLLR 547
           ++++   CK G   +A  LL  M                    E  N   +E  FC+LLR
Sbjct: 778 NSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLR 837

Query: 548 -GFVQNNKKSKVVV 560
            G+  +    KV++
Sbjct: 838 CGYNYDEVAWKVLI 851



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 266/520 (51%), Gaps = 16/520 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP-DLFVLNLLINCLCKMGITSGAFV 137
           P +T  ++L ++   N    T ++ F+ +  +  FP  L   + L+  L +      A  
Sbjct: 49  PSLTP-SLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAEN 107

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V   +++SC +P+  TF  L+N L    R+  AA      +  A   ++ ++N L+  +C
Sbjct: 108 VRNSMIKSCTSPHDATF--LLNLL---RRMNTAAAAADHQHQLAFKLSLTSYNRLL--MC 160

Query: 198 RTRNTLV--ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            +R ++V   + L++EM+ + G    P+++T N++++  CK G +  A+   +++     
Sbjct: 161 LSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEP 220

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P++ TY SL+ G+C  DD + A  +F  M     + + V++  +I+  C+ GK+ +   
Sbjct: 221 GPDLFTYTSLVLGYCRNDDVERACGVFCVM----PRRNAVSYTNLIHGLCEAGKLHEALE 276

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
               M + G  P   TY  L+   C  GR   A  LF  M  +GC  +VY+Y +LI+  C
Sbjct: 277 FWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLC 336

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K+ ++++A+ +  EM+ + + PSV+ +N L+    + G + DA+ ++  M+   V P+  
Sbjct: 337 KEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVR 396

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+   I G C+   +  A+ +   +   K    + TYN LI+GLC++G + +A +LF  +
Sbjct: 397 TYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLM 456

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G  PD  T +  +  LC+ G++ +A+ +L  ++ K+   +E  +  L+ G+ +  K 
Sbjct: 457 IRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKI 516

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
                L  +M AE+ + + ++ +  ++D L K+ K ++ +
Sbjct: 517 EHAASLFKRMLAEECLPNSITFNV-MIDGLRKEGKVQDAM 555



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 230/514 (44%), Gaps = 32/514 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +AV     M   K  P + ++  L+    + K  D  ++L  ++  + L PD+   N L
Sbjct: 377 EDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTL 436

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC++G+   A  +   ++R  F+P+  TFN  +  LC  GR+ EA ++ + L     
Sbjct: 437 IHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHV 496

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N   +  LI+G C+      A  LF+ M+ E    C P+ +T+N +IDGL K+G V  
Sbjct: 497 KANEHAYTALIDGYCKAGKIEHAASLFKRMLAE---ECLPNSITFNVMIDGLRKEGKVQD 553

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L+  M   ++ P + TYN L+       D+  A  +   ++ +G QP+VVT+ A I 
Sbjct: 554 AMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIK 613

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C  G++++   ++  +   GV  D+  YN L++ +  +G +  A  +   M   GC  
Sbjct: 614 AYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEP 673

Query: 363 DVYSYNILINANCKDQKVEDA-----------------------------VCLYREMLSE 393
              +Y+IL+     ++  ++                                L+ +M   
Sbjct: 674 SYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAEC 733

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
              P++ TY+ L++GL +VG L  A  L   M+   + P      + +   CK G   EA
Sbjct: 734 GCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEA 793

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           V +  ++  C     +E+Y  LI GL +    + A  +F  L   G   D V    +I  
Sbjct: 794 VTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDG 853

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           L K G +D+ ++LL  ME   C     T+  L++
Sbjct: 854 LAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQ 887



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 210/482 (43%), Gaps = 69/482 (14%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+   + M++ K SP + ++  L+  L +    D+   LF+ +  +G  PD +  N  
Sbjct: 412 DRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAF 471

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + CLC+MG    A  +L  +       N   +  LI+G C  G+I  AA LFK++    C
Sbjct: 472 MVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEEC 531

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +TFN +I+GL +      A+ L E+M  +F    KP + TYN +++ + K+   D+
Sbjct: 532 LPNSITFNVMIDGLRKEGKVQDAMLLVEDMA-KFDV--KPTLHTYNILVEEVLKEYDFDR 588

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+L ++      PNV+TY + I  +C     +EA+ + I++ + GV  D   +N +IN
Sbjct: 589 ANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLIN 648

Query: 303 -YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE----------- 350
            Y C  G +D    +L  M   G  P  +TY+ LM    +                    
Sbjct: 649 AYGCM-GLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNI 707

Query: 351 ------------------LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
                             LF  M   GC  ++ +Y+ LIN  CK  ++  A  LY  M  
Sbjct: 708 SVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMRE 767

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM---------------------QLNDVV 431
             I PS I +N+LLS   ++G  G+A+ L+D M                     Q+N   
Sbjct: 768 GGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEK 827

Query: 432 P--------------DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
                          D   +   IDGL K G+V +  ++   +    C L  ETY+ L+ 
Sbjct: 828 AEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQ 887

Query: 478 GL 479
            L
Sbjct: 888 EL 889



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 175/450 (38%), Gaps = 47/450 (10%)

Query: 2   VFKSSHRSFSLASKAGYRCNFW---------CSFGRPPNPKTDLSS---HHFKDGTSIAK 49
           V  S+ R F L  + G+  + W         C  GR       L S    H K       
Sbjct: 445 VVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYT 504

Query: 50  FLNDRH-KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLN 108
            L D + K+G I    A   F  M+  +  P   +F +++  L K  +    + L + + 
Sbjct: 505 ALIDGYCKAGKI--EHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMA 562

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
              + P L   N+L+  + K      A  +L R++ S + PN VT+   I   C++GR+ 
Sbjct: 563 KFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLE 622

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           EA  +  K+       +   +N LIN          A  +   M   FG  C+P  +TY+
Sbjct: 623 EAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRM---FGTGCEPSYLTYS 679

Query: 229 SIIDGLC-----KDGF-------------VDKA-----------KELLLQMKDRNINPNV 259
            ++  L      K+G              VD               L  +M +    PN+
Sbjct: 680 ILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNL 739

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
            TY+ LI G C V     A  L+  M + G+ P  +  N++++  CK G   +   LL+ 
Sbjct: 740 NTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDS 799

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M++        +Y  L+ G        +A  +F S++  G  +D  ++ +LI+   K   
Sbjct: 800 MMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGY 859

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           V+    L   M     R    TY+ L+  L
Sbjct: 860 VDQCSELLNLMEKNGCRLHPETYSMLMQEL 889


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 161/525 (30%), Positives = 271/525 (51%), Gaps = 7/525 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++TI+   L + K+ +     F+ +   GL PD    + LI+   + G      + 
Sbjct: 8   PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID-EVLR 66

Query: 139 LGRILRSCFTP-NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  ++ SC  P N +T+N LI+GLC  G++ +AA + K +    C PN  TF  LI G C
Sbjct: 67  IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 126

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  N   AL+L +EM         P  V+Y ++I+GLC    +  A +LL +M    + P
Sbjct: 127 REHNMGRALELLDEMEKRN---LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 183

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV+ Y++LI G+      +EA+ L   M  +GV PD+  +NA+I+   K GKM++ +  L
Sbjct: 184 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 243

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             +  RG+ PD VT+ + + G+   G+++ A + F  M+  G   +   Y +LIN + K 
Sbjct: 244 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 303

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             + +A+ ++R + +  + P V T +  + GL + G + +ALK+  +++   +VPD FT+
Sbjct: 304 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 363

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           ++ I G CK G V +A ++   +        I  YN L++GLCK G ++ A KLF  +  
Sbjct: 364 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 423

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           KG  PD VT STMI   CK   + +A  L  +M +K   P    +  L+ G  +     K
Sbjct: 424 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 483

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            + L  +M  +K   + LS ++ ++D   K  K +E    F+ ++
Sbjct: 484 AMNLFREM-LQKGFATTLSFNT-LIDGYCKSCKIQEASQLFQEMI 526



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/544 (29%), Positives = 254/544 (46%), Gaps = 74/544 (13%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   F+ M K    P   + + L+    +    D V+ +   + S G+  +L   N+L
Sbjct: 27  NEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVL 86

Query: 123 INCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I+ LCK G +   A ++ G I   C  PN+ TF  LI G C E  +  A  L  ++    
Sbjct: 87  IHGLCKFGKMEKAAEILKGMITLGC-KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 145

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ V++  +INGLC  ++  +A KL E+M   F  + KP+VV Y+++I G   +G ++
Sbjct: 146 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMT--FSGL-KPNVVVYSTLIMGYASEGRIE 202

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A+ LL  M    + P++  YN++I         +EA    +E+   G++PD VTF A I
Sbjct: 203 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 262

Query: 302 NYNCKDGKMDKVNRLLELMIQRG-----------------------------------VN 326
               K GKM +  +  + M+  G                                   V 
Sbjct: 263 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 322

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD  T ++ + G    GR+  A ++F  +  KG   DV++Y+ LI+  CK  +VE A  L
Sbjct: 323 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 382

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + EM  + I P++  YN L+ GL + G++  A KL D M    + PDS T++T IDG CK
Sbjct: 383 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 442

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG------- 499
           +  V EA  +F  + +   +     YN L++G CK G ++ A  LF  +  KG       
Sbjct: 443 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF 502

Query: 500 ---------------------------PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
                                       +PD VT +T+I W CK G+M++AN L  +M+ 
Sbjct: 503 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 562

Query: 533 KNCV 536
           +N +
Sbjct: 563 RNLI 566



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/516 (29%), Positives = 258/516 (50%), Gaps = 21/516 (4%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ L+   A   + +    L   ++ +G+ PD+F  N +I+CL K G    A   
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  I      P+ VTF   I G    G++ EAA+ F ++      PN   +  LING  +
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 302

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             N + AL +F  + +  G +  PDV T ++ I GL K+G V +A ++  ++K++ + P+
Sbjct: 303 AGNLMEALSIFRHL-HALGVL--PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TY+SLI GFC   + ++A  L  EM   G+ P++  +NA+++  CK G + +  +L +
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M ++G+ PD+VTY++++DG+C    ++ A  LF  M SKG +   + YN L++  CK+ 
Sbjct: 420 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 479

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +E A+ L+REML +    + +++NTL+ G  +   + +A +L  +M    ++PD  T+ 
Sbjct: 480 DMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 538

Query: 439 TYIDGLCKNGFVLEAVQVFQAI--RNCKCELRIE---------------TYNCLINGLCK 481
           T ID  CK G + EA  +F+ +  RN   +                   TY  +I   CK
Sbjct: 539 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCK 598

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              L  A KL   +  KG +        +I  LCK   + +A+ LL +M      PS   
Sbjct: 599 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAA 658

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
             TL+R F +  K  +   +   + +  LV    +L
Sbjct: 659 CSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL 694



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 253/496 (51%), Gaps = 4/496 (0%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           +   GL P+ +   ++   LC+    + A +    + ++   P+    + LI+G   EG 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           I E  R+   +       N++T+N LI+GLC+      A ++ + M+   G  CKP+  T
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT-LG--CKPNSRT 117

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           +  +I+G C++  + +A ELL +M+ RN+ P+ ++Y ++I G C   D   A  L  +M 
Sbjct: 118 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 177

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +G++P+VV ++ +I     +G++++  RLL+ M   GV PD   YN+++      G++ 
Sbjct: 178 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 237

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A    + +  +G + D  ++   I    K  K+ +A   + EML   + P+   Y  L+
Sbjct: 238 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 297

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           +G F+ GNL +AL +   +    V+PD  T + +I GL KNG V EA++VF  ++     
Sbjct: 298 NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 357

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + TY+ LI+G CK G ++ A +L   +  KG  P++   + ++  LCK G + +A  L
Sbjct: 358 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 417

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
              M  K   P  VT+ T++ G+ ++   ++   L H+M + K V     + + +V    
Sbjct: 418 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS-KGVQPHSFVYNALVHGCC 476

Query: 587 KDKKYRECLNQFRHLL 602
           K+    + +N FR +L
Sbjct: 477 KEGDMEKAMNLFREML 492



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 227/453 (50%), Gaps = 23/453 (5%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +   F+    K+G +T  EA  +FD M+     P    +T+L+    K       +S
Sbjct: 254 DAVTFGAFILGYSKTGKMT--EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 311

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F+ L++ G+ PD+   +  I+ L K G    A  V   +      P+  T++ LI+G C
Sbjct: 312 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 371

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            +G + +A  L  ++ +    PN+  +N L++GLC++ +   A KLF+ M  +     +P
Sbjct: 372 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG---LEP 428

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D VTY+++IDG CK   V +A  L  +M  + + P+   YN+L+ G C   D ++A  LF
Sbjct: 429 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 488

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM+  G     ++FN +I+  CK  K+ + ++L + MI + + PD VTY +++D  C  
Sbjct: 489 REMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 547

Query: 343 GRISRAR-----------------ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
           G++  A                   LF  MV+KG + D  +Y ++I A+CK+  + +A  
Sbjct: 548 GKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 607

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L  E++ + +      ++ L++ L +  +L +A KL+D+M    + P     +T +    
Sbjct: 608 LRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFH 667

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           + G + EA +VF+ +++        T   L+NG
Sbjct: 668 EAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 175/397 (44%), Gaps = 50/397 (12%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + + F++   K+G +   EA+  F  + +    P + +++ L++   K  + +    
Sbjct: 324 DVQTCSAFIHGLLKNGRV--QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 381

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L   +   G+ P++F+ N L++ LCK G    A  +   +      P++VT++ +I+G C
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 441

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------- 215
               + EA  LF ++      P+   +N L++G C+  +   A+ LF EM+ +       
Sbjct: 442 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS 501

Query: 216 ----FGAICK--------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
                   CK                    PD VTY ++ID  CK G +++A  L  +M+
Sbjct: 502 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 561

Query: 252 DRN-----------------INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           +RN                 + P+ +TY  +I   C  D+  EA  L  E++  G+    
Sbjct: 562 ERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 621

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
              + +I   CK   + + ++LL+ M + G+ P     ++L+  F   G++  A  +F  
Sbjct: 622 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEG 681

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           + S G   D  +   L+N N  D   EDA  L ++++
Sbjct: 682 VKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 179/630 (28%), Positives = 290/630 (46%), Gaps = 89/630 (14%)

Query: 38  SHHFKDGT--SIAKFLNDR-----------HKSGNITSNEAVY----FFDCMIKMKPSPG 80
           SH ++ GT  ++A+ L D            H   +  S EA+     F D + +     G
Sbjct: 120 SHSYRPGTFAALARRLVDARRYAAAGRARIHLIKSCHSKEAMARTMSFLDMLSQSGLRMG 179

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + +++ LL  L++      V+  + R+ S G+ P+L + N +IN LCK G  + A  ++ 
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 239

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           ++  S  +P+T T+  +I G C +  +  A ++F ++    C+PN VT++TLINGLC + 
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299

Query: 201 NTLVALKLFEEMVNE---------FGAI-----------------------CKPDVVTYN 228
               A  L  EM+            G I                       C+P+V TY 
Sbjct: 300 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359

Query: 229 SIIDGLCKDGFVDKAKELLLQM--------------------KDRNI------------- 255
           ++I GLC  G +  A  L  +M                    ++R I             
Sbjct: 360 ALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 256 --NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
             +PN++TYN +I G+C + D K+A  +   M+  G   ++VT+N +I   C  G     
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
            R+L+LM   G  PD  +Y  L+ GFC + ++  A  LF  MV  G   +  +Y  LI+ 
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CKD+K++ A  L   M     RP+V TYN L+ GL +  N   A +L   M    + P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   IDGLCKNG    A+++F  +    C   + TY+ LI  L + G+++ A  LF 
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            L+  G IPD +T   MI      G+++ A + L  M    C P+  T+  L++G     
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL---- 715

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            K++ ++   ++AA   VV + S   +  D
Sbjct: 716 -KNEYLLADQRLAALPDVVPNCSFGYQTTD 744



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 242/543 (44%), Gaps = 64/543 (11%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+  F  M +    P   ++  L+ +L +N++      +   +  NG  P++   N +I 
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C +G    A +V+  +L+   + N VT+N +I G C  G    A R+   +    C P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +  ++  LI G C+      A  LF EMV++   +C P+ VTY ++IDG CKD  +D A 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDD--GLC-PNEVTYTALIDGYCKDEKLDTAT 550

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            LL  MK     PNV TYN LI G    +++  A+ L   M++ G+ P+VVT+ AMI+  
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 305 CK-----------------------------------DGKMDKVNRLLELMIQRGVNPDT 329
           CK                                   +GK+++   L   + + G+ PD 
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN-----CKDQKV---- 380
           +TY  +++ + + G++  A      M+  GC+  +++Y +LI          DQ++    
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730

Query: 381 --------------EDAVCLYREMLSERIRP--SVITYNTLLSGLFQVGNLGDALKLIDK 424
                         +DAV +    L+E + P  SV   N L+S L   G   +A +L+  
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQNALVSNLSTAGRWFEANELLGS 789

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    + PD   + + +  L +   V  A+ VF+ +    CE+ +  Y  LI  LC++ R
Sbjct: 790 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 849

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
            K A   F  +  +   PD V  + +I  L ++G  D   + L  ME +  +PS   +  
Sbjct: 850 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTI 909

Query: 545 LLR 547
           L R
Sbjct: 910 LAR 912



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 198/405 (48%), Gaps = 3/405 (0%)

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C ++  +     F +M+++ G   +  +  Y++++  L + G      +   +M    + 
Sbjct: 155 CHSKEAMARTMSFLDMLSQSG--LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQ 212

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN++ YN++I   C   +  +A+ +  ++ ++ + PD  T+ +MI  +C+   +D   ++
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M + G  P+TVTY++L++G C  GR++ A +L   M+  G     ++    I A C 
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
               EDA  L+ +M ++   P+V TY  L+SGL   G L  A+ L  +M  + V P++ T
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVT 392

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   I+ L +N  +  A  V   +    C   I TYN +I G C +G  K A  + + + 
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +G   ++VT +T+I   C  G    A  +L  M    C P E ++  L+ GF + +K  
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
               L ++M  + L  ++++ ++ ++D   KD+K     +   H+
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTA-LIDGYCKDEKLDTATSLLEHM 556


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 154/511 (30%), Positives = 270/511 (52%), Gaps = 16/511 (3%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           + +  M+  + SP   +F +L+ +L  +   +    LF ++ + G  P+ F   +L+   
Sbjct: 133 WLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGY 192

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           C+ G+ S    +LG++      PN V +N LI+  C EG+  +A +L  K+      P+V
Sbjct: 193 CRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHV 252

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
            TFN+ I+ LC +   L A ++F +M ++E   +  P+V+TY  ++ G CK+G +++AK 
Sbjct: 253 ETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKT 312

Query: 246 LLLQMKDRNIN-PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           L+  MK RN N  N+ +YN  + G        EA  +  EM+  G++PD+ ++N +++  
Sbjct: 313 LVDTMK-RNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGL 371

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK+G +     L+ LMI+ G+ PDTVTY++L+ G+C  G++  A  L   M+S  C  + 
Sbjct: 372 CKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNT 431

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           Y+ N+L+++  K+ ++ +A  L ++M  +      +T N +++ L   G L  A+++++ 
Sbjct: 432 YTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNG 491

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M         +T  +   G   N F+     V   I   KC   + TY+ +I+GLCK GR
Sbjct: 492 M---------WTHGSAALGNLGNSFI---GLVDDTISGKKCTPDLVTYSTIISGLCKAGR 539

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           L  A K F  +  KG  PD     T IH  C+EG++  A  +L DME + C  +  T+ +
Sbjct: 540 LDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNS 599

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           L+ G    N+  ++  L+ +M  EK V  D+
Sbjct: 600 LILGLGSKNQIFELYGLIDEM-REKGVSPDV 629



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 237/486 (48%), Gaps = 27/486 (5%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D M +      + S+ I L  L +N +      + K +   G+ PD++  N+++
Sbjct: 309 EAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVM 368

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G+ S A +++G ++R+   P+TVT++ L++G C++G++ EA  L  ++    C 
Sbjct: 369 DGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCS 428

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T N L++ L +      A  L ++M NE G     D VT N II+ LC +G +DKA
Sbjct: 429 PNTYTCNVLLHSLWKEGRISEAENLLQKM-NEKGYGV--DTVTCNIIINALCNNGQLDKA 485

Query: 244 KELLLQM-----------------------KDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            E++  M                         +   P+++TY+++I G C      +AK 
Sbjct: 486 IEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKK 545

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            FIEMM  G+QPD   ++  I+  C++GK+    ++L+ M +RG N    TYNSL+ G  
Sbjct: 546 KFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLG 605

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
              +I     L   M  KG   DV +YN ++N  C+  ++ DA  +  EML + I P++ 
Sbjct: 606 SKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNIS 665

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           ++  L+    +  +   + ++ + + LN        +    + L   G V EA ++F+  
Sbjct: 666 SFRILIKAFCKACDFKASHEVFE-IALNVCGHKEALYTLMFNELLVGGKVAEAKELFETA 724

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            +   ++    Y  LI+ LCK  +L+ A  + HRL  KG   D  +   +I    K G  
Sbjct: 725 LDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNK 784

Query: 521 DKANDL 526
             A++L
Sbjct: 785 HVADEL 790



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 178/349 (51%), Gaps = 4/349 (1%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           +P +  YN ++    ++  V+    L   M    ++P   T+N LI   C     ++A+ 
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF +M   G +P+  TF  ++   C+ G   K   LL  M   G+ P+ V YN+L+  FC
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM-LSERI---R 396
             G+   A +L   M   G    V ++N  I+A C   K+ +A  ++R+M + E +    
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P+VITY  +L G  + G L +A  L+D M+ N    +  ++  ++ GL +NG +LEA  V
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
            + +     E  I +YN +++GLCK G L  A  L   +   G +PD VT ST++H  C 
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +G++ +AN+LL +M + NC P+  T   LL    +  + S+   LL KM
Sbjct: 409 KGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKM 457



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 195/451 (43%), Gaps = 89/451 (19%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA      M+ +   P + S+ I++  L KN        L   +  NG+ PD    + L+
Sbjct: 344 EAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLL 403

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C  G    A  +L  ++ +  +PNT T N L++ L  EGRI EA  L +K+N     
Sbjct: 404 HGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYG 463

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMV-----------NEF---------GAICKPD 223
            + VT N +IN LC       A+++   M            N F         G  C PD
Sbjct: 464 VDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPD 523

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN------------------------- 258
           +VTY++II GLCK G +D AK+  ++M  + + P+                         
Sbjct: 524 LVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLK 583

Query: 259 ----------VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
                     + TYNSLI G    +   E   L  EM + GV PDV T+N M+N  C+ G
Sbjct: 584 DMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGG 643

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC---------------------------- 340
           +++    +L+ M+Q+G++P+  ++  L+  FC                            
Sbjct: 644 RINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTL 703

Query: 341 ------LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
                 + G+++ A+ELF + + +      + Y  LI+  CKD+K+E A  +   ++ + 
Sbjct: 704 MFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKG 763

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            +    ++  ++ G  ++GN   A +L ++M
Sbjct: 764 YQFDPASFMPVIDGFGKMGNKHVADELAERM 794



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 129/291 (44%), Gaps = 10/291 (3%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D +   K +P + +++ +++ L K  + D     F  + S GL PD  + +  I+  C+ 
Sbjct: 513 DTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCRE 572

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G  S AF VL  + +        T+N LI GL ++ +I E   L  ++      P+V T+
Sbjct: 573 GKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTY 632

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL-- 247
           N ++N LC       A  + +EM+ +      P++ ++  +I   CK      + E+   
Sbjct: 633 NHMLNCLCEGGRINDAPSVLDEMLQKG---ISPNISSFRILIKAFCKACDFKASHEVFEI 689

Query: 248 -LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
            L +         + +N L+ G        EAK LF   +D         +  +I+  CK
Sbjct: 690 ALNVCGHKEALYTLMFNELLVGGKVA----EAKELFETALDRSFDIGNFLYKDLIDRLCK 745

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           D K++  + +L  +I +G   D  ++  ++DGF  +G    A EL   M+ 
Sbjct: 746 DEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMME 796


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 166/555 (29%), Positives = 262/555 (47%), Gaps = 72/555 (12%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA  FF+ MI     P + +FT L+    K  Q      L  +       PD+F+   +
Sbjct: 24  DEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKR-FRPDVFLYTSV 82

Query: 123 INCLCKMG-ITSGAF----------------VVLG-----RILRSCF----------TPN 150
           I+  CK G + +G F                V+ G     RI  +C           +PN
Sbjct: 83  IHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPN 142

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
            V +  +I+GL   GRI +  + F++++  +C P   T+  +I+GLC+ +    A K+FE
Sbjct: 143 VVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFE 202

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           +MV +    C PD +TY ++IDG  K   +D+A++LL  M  +   P  +TY S++ GFC
Sbjct: 203 QMVQKG---CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 259

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            +D   EAK +  +M + G +P +  F ++++Y    G+ ++  ++L  M  RG  PD +
Sbjct: 260 KLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVI 319

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV-------------------------- 364
            Y SL+D     GR+  AR +F SM+ KGC  D                           
Sbjct: 320 LYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM 379

Query: 365 ---------YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
                    ++YN L++   K ++V+ A  +Y  M++  I+P+ +T+N L+ GLF+ G  
Sbjct: 380 AKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKT 439

Query: 416 GDALKLIDKMQLNDVVPDSF-TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
             A  L  +M   + VP +  ++   IDGL K G V EA   FQ + +        TY  
Sbjct: 440 DRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTS 499

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI  L K GR+  A KL   +   G  PDV   S +I  L     +D A D+  +M  + 
Sbjct: 500 LIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRG 559

Query: 535 CVPSEVTFCTLLRGF 549
           C P+EVT+  L RGF
Sbjct: 560 CAPNEVTYKVLRRGF 574



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 239/489 (48%), Gaps = 8/489 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + S+  +++ LA   + D     F  +  NG  PD+     LI+  CK G       
Sbjct: 4   EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L + L+  F P+   +  +I+G C  G +      F+ +   A   +V+++ T+I GL 
Sbjct: 64  LLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG--YFRAVTPKA-SLDVISYTTVIKGLA 119

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            ++    A +LFEE+     A C P+VV Y ++IDGL K G ++   +   +M   +  P
Sbjct: 120 DSKRIDEACELFEELKT---AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
              TY  +I G C      +A  +F +M+  G  PD +T+  +I+   K  KMD+  +LL
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           ++M+ +G  P  VTY S++ GFC +  I+ A+E+   M  +GC   ++ +  L++     
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            + E+A  +  EM +    P VI Y +L+  LF  G + +A  + D M      PD+ T+
Sbjct: 297 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 356

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T I    K G V  A ++ + +           YN L++G  K+ R+  A  ++ R+  
Sbjct: 357 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA 416

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM-EAKNCVPSEVTFCTLLRGFVQNNKKS 556
            G  P+ VT + ++H L K+G+ D+A  L  +M E +   P+ V++  L+ G  +  + S
Sbjct: 417 SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVS 476

Query: 557 KVVVLLHKM 565
           +  +   +M
Sbjct: 477 EAFLQFQEM 485



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 247/506 (48%), Gaps = 19/506 (3%)

Query: 28  RPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTIL 87
           R   PK  L    +   T++ K L D  +      +EA   F+ +     SP + ++T +
Sbjct: 98  RAVTPKASLDVISY---TTVIKGLADSKRI-----DEACELFEELKTAGCSPNVVAYTAV 149

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           +  L K  + +  +  F+ ++ +   P      ++I+ LCK  +   A  V  ++++   
Sbjct: 150 IDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGC 209

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+T+T+  LI+G     ++ EA +L   +     +P  VT+ ++++G C+      A +
Sbjct: 210 VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKE 269

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +  +M  E G  C+P +  + S++      G  ++A ++L +M  R   P+VI Y SLI 
Sbjct: 270 VIAQM-RERG--CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLID 326

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                    EA+ +F  M++ G  PD +T+  +I    K G ++    +LELM + GV P
Sbjct: 327 LLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGP 386

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D   YNSLMDG+  + R+ +A  ++  MV+ G + +  ++N+L++   KD K + A  L+
Sbjct: 387 DCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLF 446

Query: 388 REMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           +EML  E + P++++Y  L+ GL + G + +A     +M    ++P+  T+ + I  L K
Sbjct: 447 KEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAK 506

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G + EA ++ + +        ++ Y+ LI GL     + TA  +F  +  +G  P+ VT
Sbjct: 507 AGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVT 566

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEA 532
              +       G+        LD+EA
Sbjct: 567 YKVLRRGFRAAGRA-------LDLEA 585



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 220/486 (45%), Gaps = 36/486 (7%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P  V++N +I+GL +  ++ EA + F  +    C+P+V+ F TLI+G C+     V  KL
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDG------------------------------ 238
             + +  F    +PDV  Y S+I G CK G                              
Sbjct: 65  LNQALKRF----RPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 239 --FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              +D+A EL  ++K    +PNV+ Y ++I G       ++    F EM  +   P   T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +I+  CK   +    ++ E M+Q+G  PDT+TY +L+DGF    ++  AR+L   M+
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           +KG      +Y  +++  CK   + +A  +  +M      P +  + +LLS     G   
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +++ +M      PD   + + ID L   G V EA  VF ++    C     TY  +I
Sbjct: 301 EAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 360

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
               K+G ++ A ++   +   G  PD    ++++    K  ++D+A  +   M A    
Sbjct: 361 QNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIK 420

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           P+ VTF  L+ G  ++ K  +   L  +M  ++ V   L   + ++D L K  +  E   
Sbjct: 421 PNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFL 480

Query: 597 QFRHLL 602
           QF+ ++
Sbjct: 481 QFQEMI 486



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 183/386 (47%), Gaps = 7/386 (1%)

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            C+P +V++NT+I+GL        A K F  M++     C+PDV+ + ++I G CK G  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNG---CEPDVIAFTTLIHGFCKAGQP 58

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
               +LL Q   R   P+V  Y S+I G+C   D       +   +      DV+++  +
Sbjct: 59  QVGHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTV 114

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I       ++D+   L E +   G +P+ V Y +++DG    GRI    + F  M    C
Sbjct: 115 IKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSC 174

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
                +Y ++I+  CK Q + DA  ++ +M+ +   P  ITY TL+ G  +   + +A K
Sbjct: 175 VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARK 234

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L+D M      P + T+ + + G CK   + EA +V   +R   CE  +  +  L++   
Sbjct: 235 LLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYL 294

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
             GR + A ++   +  +G  PDV+  +++I  L   G++ +A  +   M  K C P  +
Sbjct: 295 SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDAL 354

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMA 566
           T+ T+++ F +         +L  MA
Sbjct: 355 TYGTIIQNFSKIGNVEAAGEILELMA 380



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 190/396 (47%), Gaps = 4/396 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   F+ M++    P   ++T L+   +K  + D    L   + + G  P       ++
Sbjct: 196 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 255

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK+ + + A  V+ ++      P    F  L++   ++GR  EA ++  ++    C 
Sbjct: 256 HGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCA 315

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V+ + +LI+ L  T     A  +F+ M+ +    C PD +TY +II    K G V+ A
Sbjct: 316 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG---CAPDALTYGTIIQNFSKIGNVEAA 372

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E+L  M    + P+   YNSL+ G+  ++   +A  ++  M+ +G++P+ VTFN +++ 
Sbjct: 373 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 432

Query: 304 NCKDGKMDKVNRLLELMIQRG-VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             KDGK D+   L + M+++  V P  V+Y  L+DG    GR+S A   F  M+ +G   
Sbjct: 433 LFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIP 492

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           + ++Y  LI +  K  ++ +A  L  +M+   + P V  Y+ L++GL     +  A  + 
Sbjct: 493 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 552

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            +M      P+  T+     G    G  L+   V Q
Sbjct: 553 QEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQ 588



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 161/345 (46%), Gaps = 32/345 (9%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR---- 344
           G +P +V++N +I+      KMD+  +    MI  G  PD + + +L+ GFC  G+    
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 345 -------ISRARE---LFVSMVSKGCRH-----------------DVYSYNILINANCKD 377
                  + R R    L+ S++   C+                  DV SY  +I      
Sbjct: 62  HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           +++++A  L+ E+ +    P+V+ Y  ++ GL + G + D LK  ++M  +  VP   T+
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              IDGLCK   + +A +VF+ +    C     TY  LI+G  K  ++  A KL   +  
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 241

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           KGP P  VT  +++H  CK   +++A +++  M  + C P    F +LL  ++   +  +
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 301

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
              +L +M A +    D+ L + ++DLL    +  E  + F  ++
Sbjct: 302 AYQVLTEMTA-RGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 345


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 170/576 (29%), Positives = 272/576 (47%), Gaps = 74/576 (12%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   F+ M K    P   + + L+    +    D V+ +   + S G+  +L   N+L
Sbjct: 226 NEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVL 285

Query: 123 INCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I+ LCK G +   A ++ G I   C  PN+ TF  LI G C E  +  A  L  ++    
Sbjct: 286 IHGLCKFGKMEKAAEILKGMITLGC-KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 344

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ V++  +INGLC  ++  +A KL E+M   F  + KP+VV Y+++I G   +G ++
Sbjct: 345 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMT--FSGL-KPNVVVYSTLIMGYASEGRIE 401

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A+ LL  M    + P++  YN++I         +EA    +E+   G++PD VTF A I
Sbjct: 402 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 461

Query: 302 NYNCKDGKMDKVNRLLELMIQRG-----------------------------------VN 326
               K GKM +  +  + M+  G                                   V 
Sbjct: 462 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 521

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD  T ++ + G    GR+  A ++F  +  KG   DV++Y+ LI+  CK  +VE A  L
Sbjct: 522 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 581

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + EM  + I P++  YN L+ GL + G++  A KL D M    + PDS T++T IDG CK
Sbjct: 582 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 641

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG------- 499
           +  V EA  +F  + +   +     YN L++G CK G ++ A  LF  +  KG       
Sbjct: 642 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF 701

Query: 500 ---------------------------PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
                                       +PD VT +T+I W CK G+M++AN L  +M+ 
Sbjct: 702 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 761

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +N +   VT+ +L+ G+ +  + S+V  L  KM A+
Sbjct: 762 RNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 797



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 166/559 (29%), Positives = 280/559 (50%), Gaps = 42/559 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++TI+   L + K+ +     F+ +   GL PD    + LI+   + G      + 
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID-EVLR 265

Query: 139 LGRILRSCFTP-NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  ++ SC  P N +T+N LI+GLC  G++ +AA + K +    C PN  TF  LI G C
Sbjct: 266 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 325

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  N   AL+L +EM         P  V+Y ++I+GLC    +  A +LL +M    + P
Sbjct: 326 REHNMGRALELLDEMEKRN---LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 382

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV+ Y++LI G+      +EA+ L   M  +GV PD+  +NA+I+   K GKM++ +  L
Sbjct: 383 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 442

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             +  RG+ PD VT+ + + G+   G+++ A + F  M+  G   +   Y +LIN + K 
Sbjct: 443 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 502

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             + +A+ ++R + +  + P V T +  + GL + G + +ALK+  +++   +VPD FT+
Sbjct: 503 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           ++ I G CK G V +A ++   +        I  YN L++GLCK G ++ A KLF  +  
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622

Query: 498 KGPIPDVVTCSTMI-----------------------------------HWLCKEGQMDK 522
           KG  PD VT STMI                                   H  CKEG M+K
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 682

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A +L  +M  K    + ++F TL+ G+ ++ K  +   L  +M A++++   ++ ++ V+
Sbjct: 683 AMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT-VI 740

Query: 583 DLLSKDKKYRECLNQFRHL 601
           D   K  K  E    F+ +
Sbjct: 741 DWHCKAGKMEEANLLFKEM 759



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 255/488 (52%), Gaps = 4/488 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++ L+   A   + +    L   ++ +G+ PD+F  N +I+CL K G    A   
Sbjct: 382 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 441

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  I      P+ VTF   I G    G++ EAA+ F ++      PN   +  LING  +
Sbjct: 442 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 501

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             N + AL +F  + +  G +  PDV T ++ I GL K+G V +A ++  ++K++ + P+
Sbjct: 502 AGNLMEALSIFRHL-HALGVL--PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TY+SLI GFC   + ++A  L  EM   G+ P++  +NA+++  CK G + +  +L +
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M ++G+ PD+VTY++++DG+C    ++ A  LF  M SKG +   + YN L++  CK+ 
Sbjct: 619 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 678

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +E A+ L+REML +    + +++NTL+ G  +   + +A +L  +M    ++PD  T+ 
Sbjct: 679 DMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 737

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T ID  CK G + EA  +F+ ++     +   TY  L+ G  K+G+      LF ++  K
Sbjct: 738 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 797

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PD VT   +I+  CKE  + +A  L  ++  K  +        L+    +    ++ 
Sbjct: 798 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 857

Query: 559 VVLLHKMA 566
             LL +M 
Sbjct: 858 SKLLDEMG 865



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 240/470 (51%), Gaps = 4/470 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +F   +   +K  +       F  +  +GL P+  +  +LIN   K G    A  +
Sbjct: 452 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSI 511

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +      P+  T +  I+GL   GR+ EA ++F +L      P+V T+++LI+G C+
Sbjct: 512 FRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 571

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A +L +EM  +  A   P++  YN+++DGLCK G + +A++L   M ++ + P+
Sbjct: 572 QGEVEKAFELHDEMCLKGIA---PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 628

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +TY+++I G+C  ++  EA  LF EM   GVQP    +NA+++  CK+G M+K   L  
Sbjct: 629 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 688

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+Q+G    T+++N+L+DG+C   +I  A +LF  M++K    D  +Y  +I+ +CK  
Sbjct: 689 EMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 747

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K+E+A  L++EM    +    +TY +L+ G  ++G   +   L +KM    V PD  T+ 
Sbjct: 748 KMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYG 807

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I   CK   ++EA ++   +       +   ++ LI  LCK   L  A KL   +   
Sbjct: 808 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 867

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           G  P +  CST++    + G+MD+A  +   +++   VP   T   L+ G
Sbjct: 868 GLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 270/540 (50%), Gaps = 13/540 (2%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS------NGLFPDLFVLNLL 122
           FD +I      GM      +  +AKN   D+++    R NS       GL P+ +   ++
Sbjct: 159 FDILIDSYKRMGMLDEAANVFFVAKN---DSILISLIRCNSLRSMGEKGLVPNTYTYTII 215

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
              LC+    + A +    + ++   P+    + LI+G   EG I E  R+   +     
Sbjct: 216 TAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGI 275

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N++T+N LI+GLC+      A ++ + M+   G  CKP+  T+  +I+G C++  + +
Sbjct: 276 PINLITYNVLIHGLCKFGKMEKAAEILKGMIT-LG--CKPNSRTFCLLIEGYCREHNMGR 332

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ELL +M+ RN+ P+ ++Y ++I G C   D   A  L  +M  +G++P+VV ++ +I 
Sbjct: 333 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIM 392

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
               +G++++  RLL+ M   GV PD   YN+++      G++  A    + +  +G + 
Sbjct: 393 GYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 452

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  ++   I    K  K+ +A   + EML   + P+   Y  L++G F+ GNL +AL + 
Sbjct: 453 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 512

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             +    V+PD  T + +I GL KNG V EA++VF  ++       + TY+ LI+G CK 
Sbjct: 513 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 572

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G ++ A +L   +  KG  P++   + ++  LCK G + +A  L   M  K   P  VT+
Sbjct: 573 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 632

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            T++ G+ ++   ++   L H+M + K V     + + +V    K+    + +N FR +L
Sbjct: 633 STMIDGYCKSENVAEAFSLFHEMPS-KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 691



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 227/429 (52%), Gaps = 6/429 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K+GN+   EA+  F  +  +   P + + +  +  L KN +    + +F  L  
Sbjct: 495 LINGHFKAGNLM--EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 552

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            GL PD+F  + LI+  CK G    AF +   +      PN   +N L++GLC  G I  
Sbjct: 553 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 612

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A +LF  +     +P+ VT++T+I+G C++ N   A  LF EM ++     +P    YN+
Sbjct: 613 ARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG---VQPHSFVYNA 669

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ++ G CK+G ++KA  L  +M  +      +++N+LI G+C     +EA  LF EM+   
Sbjct: 670 LVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 728

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           + PD VT+  +I+++CK GKM++ N L + M +R +  DTVTY SLM G+  +G+ S   
Sbjct: 729 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 788

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            LF  MV+KG + D  +Y ++I A+CK+  + +A  L  E++ + +      ++ L++ L
Sbjct: 789 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 848

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            +  +L +A KL+D+M    + P     +T +    + G + EA +VF+ +++       
Sbjct: 849 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 908

Query: 470 ETYNCLING 478
            T   L+NG
Sbjct: 909 TTLIDLVNG 917



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 187/396 (47%), Gaps = 21/396 (5%)

Query: 225 VTYNSIIDGLCKDGFVDKAKEL------------------LLQMKDRNINPNVITYNSLI 266
           V ++ +ID   + G +D+A  +                  L  M ++ + PN  TY  + 
Sbjct: 157 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIIT 216

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C      EAK  F EM   G++PD    +A+I+   ++G +D+V R+ ++M+  G+ 
Sbjct: 217 AGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIP 276

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            + +TYN L+ G C  G++ +A E+   M++ GC+ +  ++ +LI   C++  +  A+ L
Sbjct: 277 INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALEL 336

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             EM    + PS ++Y  +++GL    +L  A KL++KM  + + P+   ++T I G   
Sbjct: 337 LDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS 396

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G + EA ++   +        I  YN +I+ L K G+++ A      +Q +G  PD VT
Sbjct: 397 EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVT 456

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG-FVQNNKKSKVVVLLHKM 565
               I    K G+M +A     +M     +P+   +  L+ G F   N    + +  H  
Sbjct: 457 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 516

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           A    V+ D+   S  +  L K+ + +E L  F  L
Sbjct: 517 ALG--VLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 550



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 198/432 (45%), Gaps = 68/432 (15%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + + F++   K+G +   EA+  F  + +    P + +++ L++   K  + +    
Sbjct: 523 DVQTCSAFIHGLLKNGRV--QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 580

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L   +   G+ P++F+ N L++ LCK G    A  +   +      P++VT++ +I+G C
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------- 215
               + EA  LF ++      P+   +N L++G C+  +   A+ LF EM+ +       
Sbjct: 641 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS 700

Query: 216 ----FGAICK--------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
                   CK                    PD VTY ++ID  CK G +++A  L  +M+
Sbjct: 701 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 760

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           +RN+  + +TY SL+ G+  +    E   LF +M+  GV+PD VT+  +I  +CK+  + 
Sbjct: 761 ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 820

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +  +L + ++ +G                              M++KG  HD     +LI
Sbjct: 821 EAFKLRDEVVGKG------------------------------MLTKGTIHD-----LLI 845

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
            A CK + + +A  L  EM    ++PS+   +TL+    + G + +A ++ + ++   +V
Sbjct: 846 TALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLV 905

Query: 432 PDSFTFATYIDG 443
           PD+ T    ++G
Sbjct: 906 PDTTTLIDLVNG 917



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 162/336 (48%), Gaps = 6/336 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG+I    A   FD M +    P   +++ ++    K++      SLF  + S G+ P 
Sbjct: 606 KSGDI--QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 663

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            FV N L++  CK G    A  +   +L+  F   T++FN LI+G C   +I EA++LF+
Sbjct: 664 SFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQ 722

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P+ VT+ T+I+  C+      A  LF+EM  E   I   D VTY S++ G  
Sbjct: 723 EMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM-QERNLIV--DTVTYTSLMYGYN 779

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G   +   L  +M  + + P+ +TY  +I   C  D+  EA  L  E++  G+     
Sbjct: 780 KLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGT 839

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
             + +I   CK   + + ++LL+ M + G+ P     ++L+  F   G++  A  +F  +
Sbjct: 840 IHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGV 899

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
            S G   D  +   L+N N  D   EDA  L ++++
Sbjct: 900 KSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 141/382 (36%), Positives = 220/382 (57%), Gaps = 5/382 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ M+ M+ +P +  F  +L   A  K Y T VSL  RL   G+ PD F LN+L
Sbjct: 52  DDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNIL 111

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +NC C MG  +  F VL +IL+  + P+T+TF  LI GLC +G++ +A     KL     
Sbjct: 112 MNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 171

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + V++ TLING+C+  +T  A+KL  ++    G + KP+V  YN+IID LCK   V +
Sbjct: 172 KFDQVSYGTLINGVCKIGDTRGAIKLVRKID---GRLTKPNVEMYNTIIDALCKYQLVSE 228

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +M  + I+ NV++YN +I GFC      EA  LF EM    + P +VT+ ++++
Sbjct: 229 AYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMD 288

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++  V  L++ M  RG+  D +TYNSL+DG C  G + RA  LF  M  K  R 
Sbjct: 289 GLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKM--KDXRF 346

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  ++ IL++  CK  +++DA  +++++L++     V  YN +++G  + G L +AL + 
Sbjct: 347 DRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMR 406

Query: 423 DKMQLNDVVPDSFTFATYIDGL 444
            KM+ N  +P + TF   I+ L
Sbjct: 407 SKMEDNGCIPSAVTFEIIINAL 428



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 209/388 (53%), Gaps = 5/388 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P V+ FN +++     ++   A+ L   +  E   I +PD  T N +++  C  G ++  
Sbjct: 68  PPVIQFNKILDSFAXMKHYSTAVSLSHRL--ELKGI-QPDFFTLNILMNCFCHMGQINFG 124

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +L ++  R   P+ IT+ +LI G C      +A     +++  G++ D V++  +IN 
Sbjct: 125 FSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLING 184

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G      +L+  +  R   P+   YN+++D  C    +S A  LF  M +KG   +
Sbjct: 185 VCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISAN 244

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V SYNI+I   CK + V++A+ L++EM  + + P+++TY +L+ GL + G +    +LID
Sbjct: 245 VVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELID 304

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M    +  D  T+ + IDGLCKNG +  A+ +F  +++ + + R+ T+  L++GLCK G
Sbjct: 305 EMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRFD-RL-TFTILLDGLCKGG 362

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           RLK A ++F  L  K    DV   + MI+  CK+G +++A  +   ME   C+PS VTF 
Sbjct: 363 RLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFE 422

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            ++    + ++  K   LLH+M A  L+
Sbjct: 423 IIINALFEKDENDKAEKLLHEMIARGLL 450



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 191/386 (49%), Gaps = 5/386 (1%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           TP  + FN +++          A  L  +L +    P+  T N L+N  C          
Sbjct: 67  TPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFS 126

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +  +++       +P  +T+ ++I GLC  G V+KA     ++  + I  + ++Y +LI 
Sbjct: 127 VLAKILKRG---YQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLIN 183

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C + D + A  L  ++     +P+V  +N +I+  CK   + +   L   M  +G++ 
Sbjct: 184 GVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISA 243

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + V+YN ++ GFC    +  A  LF  M  K     + +Y  L++  CK  ++     L 
Sbjct: 244 NVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELI 303

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            EM    I   VITYN+L+ GL + G+L  A+ L +KM+  D   D  TF   +DGLCK 
Sbjct: 304 DEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMK--DXRFDRLTFTILLDGLCKG 361

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + +A +VFQ +   + +L +  YN +ING CK G L+ A  +  +++  G IP  VT 
Sbjct: 362 GRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTF 421

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAK 533
             +I+ L ++ + DKA  LL +M A+
Sbjct: 422 EIIINALFEKDENDKAEKLLHEMIAR 447



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++  L+  L KN   D  ++LF ++       D     +L++ LCK G    A  V   +
Sbjct: 317 TYNSLIDGLCKNGHLDRAIALFNKMKDXRF--DRLTFTILLDGLCKGGRLKDAQEVFQDL 374

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L   +  +   +N +ING C +G + EA  +  K+    C P+ VTF  +IN L      
Sbjct: 375 LTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDEN 434

Query: 203 LVALKLFEEMV 213
             A KL  EM+
Sbjct: 435 DKAEKLLHEMI 445


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 149/472 (31%), Positives = 242/472 (51%), Gaps = 3/472 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + +F  ++  L + +Q  T V + + ++S  + PD      L+    + G    A  
Sbjct: 193 EPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALR 252

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  R+     +P +VT N LING C  GR+ +A    ++      +P+ VTF+T +NGLC
Sbjct: 253 LKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLC 312

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  +   ALK+   M+ E    C+PDV TY+++I+ LC +G +++AK ++ QM D    P
Sbjct: 313 QNGHVDHALKVLGLMLQEG---CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLP 369

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +  T+N+LI   C  +  +EA  L  E+   G+ P+V TFN +IN  CK G      RL 
Sbjct: 370 DTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLF 429

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M   G  PD VTYN L+D  C  G++++A +L   M   GC     +YN +I+  CK 
Sbjct: 430 EEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKR 489

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           +++E+A  ++ +M    I  + IT+NTL+ GL     + DA +L+D+M    + P++ T+
Sbjct: 490 RRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTY 549

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            + +   CK G + +A  + Q +     E+ + TY  LINGLCK  R + A KL   ++ 
Sbjct: 550 NSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRM 609

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           KG  P     + +I  L +      A  L  +M      P   T+  + RG 
Sbjct: 610 KGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGL 661



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 249/487 (51%), Gaps = 4/487 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV   + M     +P  T+FT L+    +    +  + L  R++  G  P    +N+LIN
Sbjct: 215 AVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLIN 274

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK+G    A   + + +   F P+ VTF+  +NGLC  G +  A ++   +    C+P
Sbjct: 275 GYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEP 334

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T++T+IN LC       A  +  +MV+   + C PD  T+N++I  LC +  +++A 
Sbjct: 335 DVYTYSTVINCLCNNGELEEAKGIVNQMVD---SGCLPDTTTFNTLIVALCTENQLEEAL 391

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  ++  + ++PNV T+N LI   C V D   A  LF EM  +G  PD VT+N +I+  
Sbjct: 392 DLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNL 451

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  GK+ K   LL+ M   G    TVTYN+++DG C   RI  A E+F  M   G   + 
Sbjct: 452 CSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNA 511

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            ++N LI+  C  ++++DA  L  +M+SE ++P+ +TYN++L+   + GN+  A  ++  
Sbjct: 512 ITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQT 571

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  N    D  T+AT I+GLCK      A+++ + +R    +   + YN +I  L +   
Sbjct: 572 MTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNN 631

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK-EGQMDKANDLLLDMEAKNCVPSEVTFC 543
            + A  LF  +   G  PD  T   +   LC+  G + +A D L++M     +P   +F 
Sbjct: 632 GRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFR 691

Query: 544 TLLRGFV 550
            L  G +
Sbjct: 692 MLAEGLL 698



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 271/525 (51%), Gaps = 5/525 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           +P    +  ++  L     +D +  L   +   G    L ++   I    ++ +   AF 
Sbjct: 87  TPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFD 146

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
           +V  ++       NT  +N L+  L    +I      + +++    +P+VVTFNT+I+ L
Sbjct: 147 LVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDAL 206

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR R    A+ + EEM +       PD  T+ ++++G  ++G ++ A  L  +M +   +
Sbjct: 207 CRARQARTAVLMLEEMSS---CDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCS 263

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P  +T N LI G+C +    +A     + + +G +PD VTF+  +N  C++G +D   ++
Sbjct: 264 PTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKV 323

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L LM+Q G  PD  TY+++++  C  G +  A+ +   MV  GC  D  ++N LI A C 
Sbjct: 324 LGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCT 383

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           + ++E+A+ L RE+  + + P+V T+N L++ L +VG+   A++L ++M+ +   PD  T
Sbjct: 384 ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVT 443

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   ID LC +G + +A+ + + +    C     TYN +I+GLCK  R++ A ++F ++ 
Sbjct: 444 YNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD 503

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G   + +T +T+I  LC   ++D A +L+  M ++   P+ VT+ ++L  + +    S
Sbjct: 504 VTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNIS 563

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           K   +L  M A    V D+   + +++ L K ++ +  L   R +
Sbjct: 564 KAADILQTMTANGFEV-DVVTYATLINGLCKARRTQAALKLLRGM 607



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 232/483 (48%), Gaps = 18/483 (3%)

Query: 21  NFWCSFGRPPNP----KTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           N +C  GR  +     + +++     D  + + F+N   ++G++  + A+     M++  
Sbjct: 274 NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHV--DHALKVLGLMLQEG 331

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
             P + +++ ++  L  N + +    +  ++  +G  PD    N LI  LC       A 
Sbjct: 332 CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEAL 391

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +   +     +PN  TFN LIN LC  G    A RLF+++    C P+ VT+N LI+ L
Sbjct: 392 DLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNL 451

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C +     AL L +EM  E    C    VTYN+IIDGLCK   +++A+E+  QM    I 
Sbjct: 452 CSSGKLAKALDLLKEM--EVSG-CPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIG 508

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
            N IT+N+LI G C  +   +A  L  +M+  G+QP+ VT+N+++ + CK G + K   +
Sbjct: 509 RNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADI 568

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L+ M   G   D VTY +L++G C   R   A +L   M  KG +    +YN +I +  +
Sbjct: 569 LQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFR 628

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN-LGDALKLIDKMQLNDVVPDSF 435
                DA+ L+REM      P   TY  +  GL + G  + +A   + +M  N  +P+  
Sbjct: 629 GNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFS 688

Query: 436 TFATYIDGLCKNG---FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           +F    +GL   G   +++ A+++     N +     E+    I G  ++ +   A   F
Sbjct: 689 SFRMLAEGLLNLGMDDYLIRAIELIVEKANFR-----ESDISAIRGYLRIRKYYDAIATF 743

Query: 493 HRL 495
            RL
Sbjct: 744 GRL 746


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 260/514 (50%), Gaps = 4/514 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F  M + +  P   S   LL   AK  + D V   FK +   G  P +F  N++
Sbjct: 80  EEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIM 139

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+C+ K G    A  +   +      P+TVT+N +I+G    GR+ +    F+++   +C
Sbjct: 140 IDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSC 199

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+V+T+N+LIN  C++      L+ + EM     +  KP+VV+Y++++D  CK+  + +
Sbjct: 200 EPDVITYNSLINCFCKSGKLPKGLEFYREMKQ---SGLKPNVVSYSTLVDAFCKEDMMQQ 256

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +  + M+     PN  TY SL+   C + +  +A  L  EM++ GV+ +VVT+ A+I+
Sbjct: 257 AIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALID 316

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   +M +  +L   M+  GV P+  +YN+L+ GF     + RA EL   +  +G + 
Sbjct: 317 GLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQP 376

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  Y   I   C  +K+E A  +  EM    I+ + + Y TL+   F+ GN  + L L+
Sbjct: 377 DLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLL 436

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN-CKCELRIETYNCLINGLCK 481
           ++MQ  D      TF   IDGLCKN  V +A+  F  + N    +     Y  +I+GLCK
Sbjct: 437 EEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCK 496

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             ++K A  LF ++  +G +PD    ++++    K+G M +A  L   M         + 
Sbjct: 497 ENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLA 556

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           + +L+ GF Q N+  K    L +M  E+++  ++
Sbjct: 557 YTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV 590



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 254/504 (50%), Gaps = 4/504 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG   F  L ++L      +     F ++    +FP     N L++   K+G T G    
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              ++ +   P   T+N +I+ +  EG I  A  LF+++      P+ VT+N++I+G  +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                  +  FEEM +     C+PDV+TYNS+I+  CK G + K  E   +MK   + PN
Sbjct: 181 VGRLDDTVYFFEEMKS---MSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V++Y++L+  FC  D  ++A   +++M   G  P+  T+ ++++ NCK G +    RL  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M++ GV  + VTY +L+DG C   R+  A +LF  MV+ G   ++ SYN LI+   K +
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++ A+ L  E+    I+P ++ Y T + GL  +  +  A  ++++MQ N +  ++  + 
Sbjct: 358 NMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYT 417

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T +D   K+G   E + + + ++    E+ + T+  LI+GLCK   +  A   F R+ + 
Sbjct: 418 TLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSND 477

Query: 499 -GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G  P+    + MI  LCKE Q+  A  L   M  +  VP    + +L+ G ++     +
Sbjct: 478 FGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLE 537

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKV 581
            + L  KMA   + +  L+ +S V
Sbjct: 538 ALALRDKMAEIGMKLDLLAYTSLV 561



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 229/458 (50%), Gaps = 3/458 (0%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R+   P    F+ L + L   G + EA + F K+  F   P   + N L++   +   T 
Sbjct: 56  RNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 115

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
              + F++M+   GA  KP V TYN +ID + K+G ++ A+ L  +MK R + P+ +TYN
Sbjct: 116 GVKRFFKDMI---GAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYN 172

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S+I G+  V    +    F EM     +PDV+T+N++IN  CK GK+ K       M Q 
Sbjct: 173 SMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQS 232

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P+ V+Y++L+D FC    + +A + +V M   G   + ++Y  L++ANCK   + DA
Sbjct: 233 GLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDA 292

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EML   +  +V+TY  L+ GL     + +A KL  KM    V+P+  ++   I G
Sbjct: 293 FRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHG 352

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             K   +  A+++   ++    +  +  Y   I GLC + +++ A  + + +Q  G   +
Sbjct: 353 FVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKAN 412

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            +  +T++    K G   +   LL +M+  +   + VTFC L+ G  +N   SK +    
Sbjct: 413 TLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFG 472

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +M+ +  +  + ++ + ++D L K+ + +     F  +
Sbjct: 473 RMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQM 510



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 205/416 (49%), Gaps = 13/416 (3%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           N   FN  I   C    I+  AR++               N+++  +  ++  L    +F
Sbjct: 2   NRNGFNHTIESYCIVAHILFCARMY------------YDANSILREIVLSKAELEECDVF 49

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           +E+ +    +C P    ++++   L   G +++A +   +MK   + P   + N L+  F
Sbjct: 50  DELWSTRN-VCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKF 108

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
             +      K  F +M+  G +P V T+N MI+   K+G ++    L E M  RG+ PDT
Sbjct: 109 AKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDT 168

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTYNS++DG+  VGR+      F  M S  C  DV +YN LIN  CK  K+   +  YRE
Sbjct: 169 VTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYRE 228

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    ++P+V++Y+TL+    +   +  A+K    M+    VP+ FT+ + +D  CK G 
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGN 288

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A ++   +     E  + TY  LI+GLC   R+K A KLF ++   G IP++ + + 
Sbjct: 289 LSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNA 348

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +IH   K   MD+A +LL +++ +   P  + + T + G     K     V++++M
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEM 404



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 212/446 (47%), Gaps = 4/446 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  ++    K  + D  V  F+ + S    PD+   N LINC CK G        
Sbjct: 166 PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEF 225

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              + +S   PN V+++ L++  C E  + +A + +  +      PN  T+ +L++  C+
Sbjct: 226 YREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCK 285

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             N   A +L  EM+ E G   + +VVTY ++IDGLC    + +A++L  +M    + PN
Sbjct: 286 IGNLSDAFRLANEML-EVGV--EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPN 342

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           + +YN+LI GF    +   A  L  E+   G+QPD++ +   I   C   K++    ++ 
Sbjct: 343 LASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMN 402

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M + G+  +T+ Y +LMD +   G  +    L   M        V ++ +LI+  CK++
Sbjct: 403 EMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNK 462

Query: 379 KVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            V  A+  +  M ++  ++P+   Y  ++ GL +   +  A  L ++M    +VPD   +
Sbjct: 463 LVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAY 522

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            + +DG  K G +LEA+ +   +     +L +  Y  L+ G  +  +L+ A      +  
Sbjct: 523 TSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIG 582

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKA 523
           +  +PD V C  ++    + G +D+A
Sbjct: 583 EEILPDEVLCIGVLKKHYELGCIDEA 608



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 177/402 (44%), Gaps = 41/402 (10%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +   + + F+  M +    P + S++ L+    K       +  +  +   G  P+
Sbjct: 215 KSGKLP--KGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPN 272

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            F    L++  CK+G  S AF +   +L      N VT+  LI+GLC   R+ EA +LF 
Sbjct: 273 EFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFG 332

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+      PN+ ++N LI+G  + +N   AL+L  E+    G   +PD++ Y + I GLC
Sbjct: 333 KMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK---GRGIQPDLLLYGTFIWGLC 389

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM--------- 286
               ++ AK ++ +M++  I  N + Y +L+  +    +  E   L  EM          
Sbjct: 390 GLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVV 449

Query: 287 ---------------------------DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
                                      D G+QP+   + AMI+  CK+ ++     L E 
Sbjct: 450 TFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQ 509

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M Q G+ PD   Y SLMDG    G +  A  L   M   G + D+ +Y  L+    +  +
Sbjct: 510 MAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQ 569

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
           ++ A     EM+ E I P  +    +L   +++G + +A+ L
Sbjct: 570 LQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGL 611


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 157/549 (28%), Positives = 276/549 (50%), Gaps = 44/549 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF-----PDLFVLNLLINCLCKMGITS 133
           PG+ S   LL    + +++    + F  L S+G F     P+L   N+++  LC  G   
Sbjct: 118 PGVRSHNALLDAFVRARRFSDADAFFASL-SHGAFGRRIAPNLQTYNIMLRSLCVRGDLD 176

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            A  +   +      P+ +T++ L++G     R+  A  L  ++  +   P+ V +N L+
Sbjct: 177 RAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALL 236

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
            G  R      A++++E++V + GA   P++ TYN ++DGLCK G   +A ++  +M   
Sbjct: 237 GGCFRNGEFEKAMRVWEQLVRDPGA--SPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM--- 310
           N  P++ITY ++I G C   D   A  ++ EM+  G+ PDVV +N+++   C  G++   
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354

Query: 311 -------------------------------DKVNRLLELMIQR-GVNPDTVTYNSLMDG 338
                                          DK   L EL+ +   ++PD VT+++++ G
Sbjct: 355 WKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHG 414

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C  G  +++ ++     + G   D +SY+ +I+  CKD +++DAV LY ++  +  +P+
Sbjct: 415 LCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPN 474

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              YN L++G  Q     DA+++  +M  ND  P + T+ T I GLCK    LEA +  +
Sbjct: 475 SHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTR 534

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +    C L + TY  LI GLC+  ++  A  L++++  KG   DVV  + +IH LC  G
Sbjct: 535 EMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAG 594

Query: 519 QMDKANDLLLDMEAK-NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           ++D+A+ LL +M+ K NC P+ VT+ TL+ GF +     K   L   +    LV   +S 
Sbjct: 595 KVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISY 654

Query: 578 SSKVVDLLS 586
           ++++  L S
Sbjct: 655 NTRIKGLCS 663



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 267/518 (51%), Gaps = 9/518 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + AV  FD +     +P   +++ L++   KN + D  + L   + S  + PD    N L
Sbjct: 176 DRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNAL 235

Query: 123 INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +    + G    A  V  +++R    +PN  T+N +++GLC  G   EA  +++++    
Sbjct: 236 LGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANN 295

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+++T+ T+I+GLCR+ +   A +++ EM+   G +  PDVV YNS++ G C  G V 
Sbjct: 296 HQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKT-GLV--PDVVIYNSLLKGFCHAGRVG 352

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM--DNGVQPDVVTFNA 299
           +A +    M    I  NV +YN ++ G        +A  L+ E++  D+ + PD+VTF+ 
Sbjct: 353 EAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLW-ELLEKDDSLSPDMVTFST 410

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           MI+  C+ G  +K  ++LE     G   D  +Y+S++ G C  GR+  A +L+  +    
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + + + YN LIN  C+  K  DA+ +Y +M      P+ ITYNTL+ GL +     +A 
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEAS 530

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +   +M     + D  T+ + I GLC++  +  A+ ++  I +   +  +  +N LI+GL
Sbjct: 531 RFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGL 590

Query: 480 CKMGRLKTACKLFHRLQHKGPI-PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           C  G++  A +L   ++ K    P+VVT +T++    + G  DKA  L + +     VP 
Sbjct: 591 CSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPD 650

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            +++ T ++G    N+  + V LL++M A  ++ + ++
Sbjct: 651 IISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAIT 688



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 250/492 (50%), Gaps = 7/492 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGLFPDLFVLNL 121
           + A+Y  D M   +  P    +  LL    +N +++  + ++++L    G  P+L   N+
Sbjct: 211 DNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNV 270

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +++ LCK+G+   A  V  R++ +   P+ +T+  +I+GLC    +  AAR++ ++    
Sbjct: 271 MLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTG 330

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+VV +N+L+ G C       A K ++ M      I   +V +YN ++ GL   G VD
Sbjct: 331 LVPDVVIYNSLLKGFCHAGRVGEAWKFWDSM--SVSGI--RNVTSYNIMLKGLFDGGMVD 386

Query: 242 KAKELL-LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           KA +L  L  KD +++P+++T++++I G C      ++  +  E   +G + D  ++++M
Sbjct: 387 KATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSM 446

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  CKDG++D   +L E +      P++  YN+L++GFC   + S A  ++  M    C
Sbjct: 447 ISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDC 506

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
                +YN LI+  CK +K  +A    REML +     V TY +L+ GL +   +  AL 
Sbjct: 507 SPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALA 566

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN-CKCELRIETYNCLINGL 479
           L +++    +  D       I GLC  G V EA Q+   ++    C   + TYN L++G 
Sbjct: 567 LWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGF 626

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
            + G    A  L+  +   G +PD+++ +T I  LC   +  +   LL +M A   +P+ 
Sbjct: 627 YETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTA 686

Query: 540 VTFCTLLRGFVQ 551
           +T+  L+R  ++
Sbjct: 687 ITWNILVRAVIK 698



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 226/467 (48%), Gaps = 39/467 (8%)

Query: 174 FKKLNVF-ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGAICKPDVVTYNSII 231
           F++L  F  C+P V + N L++   R R    A   F  + +  FG    P++ TYN ++
Sbjct: 107 FRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIML 166

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
             LC  G +D+A  L   ++ R + P+ ITY++L+ GF   +    A  L  EM    VQ
Sbjct: 167 RSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQ 226

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQ-RGVNPDTVTYNSLMDGFCLVGRISRARE 350
           PD V +NA++    ++G+ +K  R+ E +++  G +P+  TYN ++DG C +G    A +
Sbjct: 227 PDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGD 286

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           ++  MV+   + D+ +Y  +I+  C+   V+ A  +Y EM+   + P V+ YN+LL G  
Sbjct: 287 VWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFC 346

Query: 411 QVGNLGDALKLIDKMQLNDV-----------------------------------VPDSF 435
             G +G+A K  D M ++ +                                    PD  
Sbjct: 347 HAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMV 406

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           TF+T I GLC+ GF  +++Q+ +  R    EL   +Y+ +I+GLCK GRL  A KL+ ++
Sbjct: 407 TFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKI 466

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
                 P+    + +I+  C+  +   A  +   M   +C P+ +T+ TL+ G  +  K 
Sbjct: 467 SMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKY 526

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +      +M  EK  + D++    ++  L +DKK    L  +  +L
Sbjct: 527 LEASRFTREM-LEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQIL 572



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 188/355 (52%), Gaps = 6/355 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLN-SNGLFPDLFVLNL 121
            EA  F+D M  +     +TS+ I+L  L      D    L++ L   + L PD+   + 
Sbjct: 352 GEAWKFWDSM-SVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFST 410

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+ LC+ G  + +  +L     S    +  +++ +I+GLC +GR+ +A +L++K+++ +
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN   +N LING C+      A++++ +M       C P  +TYN++I GLCK     
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQMAEN---DCSPTTITYNTLIHGLCKAEKYL 527

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A     +M ++    +V TY SLI G C       A  L+ +++D G+Q DVV  N +I
Sbjct: 528 EASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILI 587

Query: 302 NYNCKDGKMDKVNRLLELMIQRG-VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +  C  GK+D+ ++LL  M ++    P+ VTYN+LMDGF   G   +A  L+++++  G 
Sbjct: 588 HGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGL 647

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             D+ SYN  I   C   +  + V L  EML+  I P+ IT+N L+  + + G +
Sbjct: 648 VPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 200/444 (45%), Gaps = 74/444 (16%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + ++ ++L  L K   +     +++R+ +N   PD+     +I+ LC+      A  
Sbjct: 262 SPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAAR 321

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF----------------- 180
           V   ++++   P+ V +N L+ G C  GR+ EA + +  ++V                  
Sbjct: 322 VYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFD 381

Query: 181 ------------------ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
                             +  P++VTF+T+I+GLC       +L++ EE       +   
Sbjct: 382 GGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKEL--- 438

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D  +Y+S+I GLCKDG +D A +L  ++   +  PN   YN+LI GFC    + +A  ++
Sbjct: 439 DEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVY 498

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M +N   P  +T+N +I+  CK  K  + +R    M+++G   D  TY SL+ G C  
Sbjct: 499 SQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRD 558

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM------------ 390
            +I  A  L+  ++ KG + DV  +NILI+  C   KV++A  L  EM            
Sbjct: 559 KKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVT 618

Query: 391 ------------------------LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
                                   L   + P +I+YNT + GL       + ++L+++M 
Sbjct: 619 YNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEML 678

Query: 427 LNDVVPDSFTFATYIDGLCKNGFV 450
            + ++P + T+   +  + K G +
Sbjct: 679 ASGIIPTAITWNILVRAVIKYGPI 702


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 264/516 (51%), Gaps = 6/516 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +   EA      M++ +  P + +F IL++ LA+ +Q+  V ++ + +   G+ P+
Sbjct: 258 KSGRV--EEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPN 315

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             + N +I   C+ G  S A  +   ++        VT+N +   LC EG +  A ++  
Sbjct: 316 EVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILD 375

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTL-VALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           ++ +     +   FN+++    R    L + L+L  EM+  F    KP+     + I  L
Sbjct: 376 EMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARF---LKPNDALMTACIQEL 432

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK G  ++A E+  Q+  + +  NV T N+LI G C  ++ KEA  +   M+++GV+ D 
Sbjct: 433 CKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDR 492

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +T+N MI   CK  KMD+  +L + MI+RG  PD  T+N  +  +C +G++     L   
Sbjct: 493 ITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQ 552

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M S+G + D+ +Y  +I+  CK + +  A     E++   +RP+ + YN L+ G  + GN
Sbjct: 553 MKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGN 612

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           + DA+ ++D M+ N + P   T+ + +  +C  G V E   VF        EL +  Y  
Sbjct: 613 ISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTI 672

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +I G CK+G++  A   F  +  +G  P+ +T +T++    K G  ++A+ L  +M +  
Sbjct: 673 IIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLG 732

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            VP  V++ TL+ GF + +   K+V    +M+++ L
Sbjct: 733 IVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVL 768



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 263/535 (49%), Gaps = 39/535 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + ++T ++  L +  + D   ++   L  +G+ P +   N+L++ LCK G    AF 
Sbjct: 208 APDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFR 267

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           + GR++     P+ VTF  LI+GL    +  E   + +++  F   PN V +N +I   C
Sbjct: 268 LKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHC 327

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK----ELLL----- 248
           R  +   ALKLF+EMV++     K  VVTYN I   LCK+G ++ A+    E+LL     
Sbjct: 328 RKGHCSEALKLFDEMVSKG---IKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMV 384

Query: 249 ---------------------------QMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
                                      +M  R + PN     + I   C     +EA  +
Sbjct: 385 HCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEI 444

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           + +++  G+  +V T NA+I+  C+   M +  ++L+ M+  GV  D +TYN ++ G C 
Sbjct: 445 WFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCK 504

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             ++  A +L   M+ +G + D++++NI ++  C   KVE+ + L  +M SE ++P ++T
Sbjct: 505 ASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVT 564

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y T++ G  +  ++  A + + ++  N + P++  +   I G  +NG + +A+ +   ++
Sbjct: 565 YGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMK 624

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +    TYN L+  +C  G ++    +F +   K     V+  + +I   CK G++D
Sbjct: 625 YNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKID 684

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +A     +M ++   P+++T+ TL+  + ++  K +   L  +M +  +V   +S
Sbjct: 685 EAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVS 739



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 204/409 (49%), Gaps = 3/409 (0%)

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
           A G +  AA  F +L+     P++ T + L+  L       VA K+F EM +  G    P
Sbjct: 152 APGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRD--GKTVAP 209

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           DV TY ++I  LC+ G +D A  +L +++   I P V+TYN L+   C     +EA  L 
Sbjct: 210 DVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLK 269

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M++  V+P +VTF  +I+   +  +  +V  +L+ M   G+ P+ V YN ++   C  
Sbjct: 270 GRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRK 329

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G  S A +LF  MVSKG +  V +YN++  A CK+ ++E A  +  EML   +      +
Sbjct: 330 GHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLF 389

Query: 403 NTLLS-GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           N++++  L   G L   L+LI +M    + P+       I  LCK+G   EA +++  + 
Sbjct: 390 NSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVL 449

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                + + T N LI+GLC+   +K A K+   + + G   D +T + MI   CK  +MD
Sbjct: 450 GKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMD 509

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           +A  L  DM  +   P   TF   L  +    K  +++ LL +M +E L
Sbjct: 510 EAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGL 558



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 190/380 (50%), Gaps = 5/380 (1%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           +KP+  +   T  +  L K+ +++    ++ ++   GL  ++   N LI+ LC+      
Sbjct: 418 LKPNDAL--MTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKE 475

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  VL  ++ S    + +T+N +I G C   ++ EA +L   +      P++ TFN  ++
Sbjct: 476 ATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLH 535

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             C        L L ++M +E     KPD+VTY +IIDG CK   + KA E L ++    
Sbjct: 536 TYCNLGKVEEILHLLDQMKSEG---LKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNG 592

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN + YN+LI G+    +  +A  +   M  NG+QP  VT+N+++ + C  G +++V 
Sbjct: 593 LRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVK 652

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            +    I + +    + Y  ++ GFC +G+I  A   F  M S+G   +  +Y  L+ A 
Sbjct: 653 AVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAY 712

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K    E+A  L+ EM+S  I P  ++YNTL+SG  +V +L   ++   +M    +  D 
Sbjct: 713 SKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDG 772

Query: 435 FTFATYIDGLCKNGFVLEAV 454
            ++  ++DG+       EAV
Sbjct: 773 CSYNAFVDGITTPWCQKEAV 792


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 167/526 (31%), Positives = 275/526 (52%), Gaps = 48/526 (9%)

Query: 11  SLASKAGYRCNFWCSFGRPPNPKTDLS-SHHFK------DGTSIAKFLNDRHKSGNITSN 63
           ++AS A    +    F +  NP   LS S  F+       GT+I      R    NI  +
Sbjct: 8   AIASTAKGFLHLHHHFLKNSNPGIVLSPSLRFRFWVRAFSGTTIDYREVLRSGLHNIKFD 67

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGL--FPDLFVLN 120
           +A + F  M    P P +  F  +LT +AK + YD V++L+KR+ N+ G+   PDL+  N
Sbjct: 68  DAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCN 127

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +L+NC C+                 CF P++         L   G++M+           
Sbjct: 128 ILVNCFCR-----------------CFQPSS--------ALSYLGKMMK----------L 152

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
             +P++VT ++L+NG C + +   A+ +  +M  + G   K DVV    +ID LCK+  V
Sbjct: 153 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM-EKMG--IKRDVVVDTILIDTLCKNRLV 209

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
             A E+L +MKDR I+PNV+TY+SLI G C      +A+    EM    + P+V+TF+A+
Sbjct: 210 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSAL 269

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+   K GK+ KV+ + ++MIQ  ++P+  TY+SL+ G C+  R+  A ++   M+SKGC
Sbjct: 270 IDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 329

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V +Y+ L N   K  +V+D + L  +M    +  + ++ NTL+ G FQ G +  AL 
Sbjct: 330 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALG 389

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           +   M  N ++P+  ++   + GL  NG V +A+  F+ ++  + +L I TY  +I+G+C
Sbjct: 390 VFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMC 449

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           K   +K A  LF++L+ K   PD    + MI  L + G   +A+ L
Sbjct: 450 KACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 495



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 180/369 (48%), Gaps = 14/369 (3%)

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFC-------CVDDWKEAKCLFIEMMDN-GVQP 292
           D A  L + M      P+++ +N ++            ++ WK      IE  +   + P
Sbjct: 67  DDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKR-----IENAEGIEISP 121

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D+ T N ++N  C+  +       L  M++ G+ PD VT +SL++GFCL   I  A  + 
Sbjct: 122 DLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVA 181

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M   G + DV    ILI+  CK++ V  A+ + + M    I P+V+TY++L++GL + 
Sbjct: 182 GQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKS 241

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G L DA + + +M    + P+  TF+  ID   K G + +   V++ +     +  + TY
Sbjct: 242 GRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTY 301

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           + LI GLC   R+  A K+   +  KG  P+VVT ST+ +   K  ++D    LL DM  
Sbjct: 302 SSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ 361

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           +    + V+  TL++G+ Q  K    + +   M +  L+ +  S +  +  L + + +  
Sbjct: 362 RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFA-NGEVE 420

Query: 593 ECLNQFRHL 601
           + L++F H+
Sbjct: 421 KALSRFEHM 429



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 163/347 (46%), Gaps = 3/347 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN---INPNVITYNSLICGFCCVDDWKEA 278
           P +V +N ++  + K    D    L  ++++     I+P++ T N L+  FC       A
Sbjct: 83  PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 142

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
                +MM  G++PD+VT ++++N  C    +     +   M + G+  D V    L+D 
Sbjct: 143 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 202

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C    +  A E+   M  +G   +V +Y+ LI   CK  ++ DA     EM S++I P+
Sbjct: 203 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 262

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           VIT++ L+    + G L     +   M    + P+ FT+++ I GLC +  V EA+++  
Sbjct: 263 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 322

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            + +  C   + TY+ L NG  K  R+    KL   +  +G   + V+C+T+I    + G
Sbjct: 323 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 382

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           ++D A  +   M +   +P+  ++  +L G   N +  K +     M
Sbjct: 383 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 429



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 38/230 (16%)

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ------VGNL----- 415
           Y  ++ +   + K +DA  L+  M      PS++ +N +L+ + +      V NL     
Sbjct: 53  YREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIE 112

Query: 416 ---------------------------GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
                                        AL  + KM    + PD  T ++ ++G C + 
Sbjct: 113 NAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSN 172

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + +AV V   +     +  +     LI+ LCK   +  A ++  R++ +G  P+VVT S
Sbjct: 173 SIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYS 232

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           ++I  LCK G++  A   L +M++K   P+ +TF  L+  + +  K SKV
Sbjct: 233 SLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 282


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 151/424 (35%), Positives = 238/424 (56%), Gaps = 28/424 (6%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           LL+ L K  ++  V  ++K +    + P+L   N +IN LCK+G  + A  V+  +    
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260

Query: 147 FTPNTVTFNFLINGLCAEGRI---MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           F PN VT+N LI+G C  GR+    +A  + K++      PN VTFN LI+G C+  N  
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            ALK+FEEM ++     KP VVTYNS+++GLC +G +++AK LL +M   N+ PNVITYN
Sbjct: 321 AALKVFEEMQSQG---LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYN 377

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI G+C     +EA+ LF  +   G+ P+V+TFN +++  CK GKM++   L ++M+++
Sbjct: 378 ALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEK 437

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G  P+  TYN L+ GFC  G++   + L   M  +G + D  +YNILI+A C+ ++ + A
Sbjct: 438 GFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKA 497

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EML + ++PS +TYN LL+G    GNL  AL L  +M+      +  T+   I G
Sbjct: 498 ARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQG 557

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL--KTACKLF-HRLQHKGP 500
            C+ G                   ++E  N L+N + + G +  +T  ++    +  KG 
Sbjct: 558 YCRKG-------------------KLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGF 598

Query: 501 IPDV 504
           +PD+
Sbjct: 599 LPDI 602



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/438 (31%), Positives = 241/438 (55%), Gaps = 13/438 (2%)

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
           +N +  D+ VL  + N    +G+   AF   G      +  + ++ N L++ L  E    
Sbjct: 158 ANSIIADMLVLAYVENSKTVLGLE--AFKRAGDYR---YKLSVLSCNPLLSALVKENEFG 212

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTY 227
               ++K++      PN++TFNT+INGLC+      A  + ++M V  F     P+VVTY
Sbjct: 213 GVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFW----PNVVTY 268

Query: 228 NSIIDGLCKDGFVDK---AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           N++IDG CK G V K   A  +L +M +  ++PN +T+N LI GFC  ++   A  +F E
Sbjct: 269 NTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEE 328

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M   G++P VVT+N+++N  C +GK+++   LL+ M+   + P+ +TYN+L++G+C    
Sbjct: 329 MQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL 388

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  ARELF ++  +G   +V ++N L++  CK  K+E+A  L + ML +   P+  TYN 
Sbjct: 389 LEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNC 448

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ G  + G + +   L+++MQ   V  D+ T+   I   C+     +A ++   + +  
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +    TYN L+NG C  G L+ A  L  +++ +G   +VVT + +I   C++G+++ AN
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDAN 568

Query: 525 DLLLDMEAKNCVPSEVTF 542
            LL +M  K  +P+  T+
Sbjct: 569 GLLNEMLEKGLIPNRTTY 586



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 225/428 (52%), Gaps = 6/428 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F  N++  + L+       + +     FK+   +    +V++ N L++ L +        
Sbjct: 156 FCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVE 215

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            +++EM+        P+++T+N++I+GLCK G ++KA +++  MK     PNV+TYN+LI
Sbjct: 216 FVYKEMIRR---KISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLI 272

Query: 267 CGFCC---VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            G+C    V    +A  +  EM++N V P+ VTFN +I+  CKD  +    ++ E M  +
Sbjct: 273 DGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQ 332

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P  VTYNSL++G C  G+++ A+ L   M+S   + +V +YN LIN  CK + +E+A
Sbjct: 333 GLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEA 392

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+  +  + + P+VIT+NTLL G  + G + +A  L   M     +P++ T+   I G
Sbjct: 393 RELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVG 452

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C+ G + E   +   ++    +    TYN LI+  C+    K A +L   +  KG  P 
Sbjct: 453 FCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPS 512

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            +T + +++  C EG +  A +L   ME +    + VT+  L++G+ +  K      LL+
Sbjct: 513 HLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLN 572

Query: 564 KMAAEKLV 571
           +M  + L+
Sbjct: 573 EMLEKGLI 580



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 197/357 (55%), Gaps = 8/357 (2%)

Query: 228 NSIIDGLCKDGFVDKAK-----ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           NSII  +    +V+ +K     E   +  D     +V++ N L+      +++   + ++
Sbjct: 159 NSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVY 218

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM+   + P+++TFN +IN  CK GK++K   +++ M   G  P+ VTYN+L+DG+C +
Sbjct: 219 KEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKM 278

Query: 343 GRISR---ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           GR+ +   A  +   MV      +  ++N+LI+  CKD+ +  A+ ++ EM S+ ++P+V
Sbjct: 279 GRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTV 338

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TYN+L++GL   G L +A  L+D+M  +++ P+  T+   I+G CK   + EA ++F  
Sbjct: 339 VTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDN 398

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           I        + T+N L++G CK G+++ A  L   +  KG +P+  T + +I   C+EG+
Sbjct: 399 IGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGK 458

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           M++  +LL +M+ +      VT+  L+  + +  +  K   L+ +M  + L  S L+
Sbjct: 459 MEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLT 515



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 165/299 (55%), Gaps = 3/299 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++ K SP   +F +L+    K++     + +F+ + S GL P +   N L+N LC  G 
Sbjct: 294 MVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGK 353

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + A V+L  +L S   PN +T+N LING C +  + EA  LF  +      PNV+TFNT
Sbjct: 354 LNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNT 413

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++G C+      A  L ++++ E G +  P+  TYN +I G C++G +++ K LL +M+
Sbjct: 414 LLHGYCKFGKMEEAF-LLQKVMLEKGFL--PNASTYNCLIVGFCREGKMEEVKNLLNEMQ 470

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R +  + +TYN LI  +C   + K+A  L  EM+D G++P  +T+N ++N  C +G + 
Sbjct: 471 CRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLR 530

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
               L + M + G   + VTYN L+ G+C  G++  A  L   M+ KG   +  +Y I+
Sbjct: 531 AALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 117/235 (49%), Gaps = 3/235 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA    D M+     P + ++  L+    K K  +    LF  +   GL P++   N L
Sbjct: 355 NEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTL 414

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK G    AF++   +L   F PN  T+N LI G C EG++ E   L  ++     
Sbjct: 415 LHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGV 474

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + VT+N LI+  C  +    A +L +EM+++     KP  +TYN +++G C +G +  
Sbjct: 475 KADTVTYNILISAWCEKKEPKKAARLIDEMLDKG---LKPSHLTYNILLNGYCMEGNLRA 531

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           A  L  QM+      NV+TYN LI G+C     ++A  L  EM++ G+ P+  T+
Sbjct: 532 ALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 8/150 (5%)

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           V++ +   K    + T+N +INGLCK+G+L  A  +   ++  G  P+VVT +T+I   C
Sbjct: 217 VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYC 276

Query: 516 KEG---QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
           K G   +M KA+ +L +M      P+ VTF  L+ GF ++   S  + +  +M ++ L  
Sbjct: 277 KMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKP 336

Query: 573 SDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           + ++ +S V  L ++ K     LN+ + LL
Sbjct: 337 TVVTYNSLVNGLCNEGK-----LNEAKVLL 361


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 256/504 (50%), Gaps = 18/504 (3%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A  FFD M+    +P + ++ IL+  L         +S+ + +   G  P++   N L+ 
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 193

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
              + G   GA  ++G +L     PN VTFN ++NG+C  G++ +A ++F ++      P
Sbjct: 194 AFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAP 253

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + V++NTL+ G C+   +  AL +F EM  +      PDVVT+ S+I  +CK G ++ A 
Sbjct: 254 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG---IMPDVVTFTSLIHVMCKAGNLEWAV 310

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            L+ QM++R +  N +T+ +LI GFC      +A      M    ++P VV +NA+IN  
Sbjct: 311 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGY 370

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  G+MD+   LL  M  +G+ PD VTY++++  +C       A EL   M+ KG   D 
Sbjct: 371 CMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDA 430

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y+ LI   C+++++ DA  L++ M+   ++P   TY +L+ G  + GN+  AL L DK
Sbjct: 431 ITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDK 490

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV---------------FQAIRNCKCELRI 469
           M    V+PD  T++  I+GL K+   +EA Q+               + A+ +C  +  +
Sbjct: 491 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAEL 550

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
           ++   L+ G C  G +  A K++  +  +    D    S +IH  C+ G + KA      
Sbjct: 551 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 610

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNN 553
           M  +   P+  +  +L+RG  +N 
Sbjct: 611 MLQRGFAPNSTSTISLIRGLFENG 634



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 222/428 (51%), Gaps = 4/428 (0%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           + P+ + +N ++  L ++  +  A R F  +      PNV T+N LI  LC   +   AL
Sbjct: 112 YVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            +  +M    GA C P+VVTYN+++    + G VD A+ L+  M D  + PN++T+NS++
Sbjct: 171 SILRDM---RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMV 227

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C     ++A+ +F EMM  G+ PD V++N ++   CK G   +   +   M Q+G+ 
Sbjct: 228 NGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 287

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD VT+ SL+   C  G +  A  L   M  +G + +  ++  LI+  CK   ++DA+  
Sbjct: 288 PDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 347

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            R M   RI+PSV+ YN L++G   VG + +A +L+ +M+   + PD  T++T I   CK
Sbjct: 348 VRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 407

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           N     A ++ Q +          TY+ LI  LC+  RL  A  LF  +   G  PD  T
Sbjct: 408 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFT 467

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            +++I   CKEG +++A  L   M     +P  VT+  L+ G  ++ +  +   LL K+ 
Sbjct: 468 YTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY 527

Query: 567 AEKLVVSD 574
            E+ + ++
Sbjct: 528 HEEPIPAN 535



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 219/420 (52%), Gaps = 9/420 (2%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V+ +N ++  L     T  A + F+ M+++  A   P+V TYN +I  LC  G   +A
Sbjct: 114 PSVLAYNAVLLALSDASLT-SARRFFDSMLSDGVA---PNVYTYNILIRALCGRGHRKEA 169

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +L  M+     PNV+TYN+L+  F    +   A+ L   M+D G++P++VTFN+M+N 
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK GKM+   ++ + M++ G+ PD V+YN+L+ G+C  G    A  +F  M  KG   D
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V ++  LI+  CK   +E AV L R+M    ++ + +T+  L+ G  + G L DAL  + 
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M+   + P    +   I+G C  G + EA ++   +     +  + TY+ +I+  CK  
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
              +A +L  ++  KG +PD +T S++I  LC+E ++  A+ L  +M      P E T+ 
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
           +L+ G  +     + + L  KM     V+ D+   S +++ LSK  +  E     + LLF
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAG-VLPDVVTYSVLINGLSKSARAMEA----QQLLF 524



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 217/476 (45%), Gaps = 57/476 (11%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG S    +    K+G   S+EA+  F  M +    P + +FT L+ ++ K    +  V+
Sbjct: 254 DGVSYNTLVGGYCKAG--CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVT 311

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC-FTPNTVTFNFLINGL 161
           L +++   GL  +      LI+  CK G    A + + R +R C   P+ V +N LING 
Sbjct: 312 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV-RGMRQCRIKPSVVCYNALINGY 370

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  GR+ EA  L  ++      P+VVT++T+I+  C+  +T  A +L ++M+ E G +  
Sbjct: 371 CMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML-EKGVL-- 427

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD +TY+S+I  LC++  +  A  L   M    + P+  TY SLI G C   + + A  L
Sbjct: 428 PDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSL 487

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD---- 337
             +M+  GV PDVVT++ +IN   K  +  +  +LL  +      P    Y++LM     
Sbjct: 488 HDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRK 547

Query: 338 -----------GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
                      GFC+ G ++ A +++ SM+ +    D   Y++LI+ +C+   V  A+  
Sbjct: 548 AELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSF 607

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           +++ML     P+  +  +L+ GLF+                                   
Sbjct: 608 HKQMLQRGFAPNSTSTISLIRGLFE----------------------------------- 632

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           NG V+EA QV Q + NC      E    LI+     G +     + H +   G +P
Sbjct: 633 NGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 264/499 (52%), Gaps = 4/499 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            +D M +    P      +++  L ++K++D V+ LFK +   G  PD  V    +    
Sbjct: 18  LYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAV 77

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K+G    A  +   + R    PN   +N LI GLC E RI +A +LF +++V    PN V
Sbjct: 78  KLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRV 137

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           TFNTLI+G C+     VA+ L E M  E     +P ++T+NS++ GLCK   +++A+ +L
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRERMKKE---KVEPSIITFNSLLSGLCKARRIEEARCML 194

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKC-LFIEMMDNGVQPDVVTFNAMINYNCK 306
            ++K     P+  TY+ +  G    DD   A   L+ E +  GV+ D  T + ++N  CK
Sbjct: 195 NEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCK 254

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +GK++K   +L+ +++ G+ P  V YN++++G+C +G + RA      M S+G R +  +
Sbjct: 255 EGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIA 314

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           +N +I+  C+ Q ++ A    ++M+ + I PSV TYN L+ G  ++       +++++M+
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME 374

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            N   P+  ++ + I+ LCK+G +LEA  V + +           YN LI+G C +G+L+
Sbjct: 375 ENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLR 434

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A + F  +   G    +VT +++I  LCK G++ +A ++   + +    P  +T+ +L+
Sbjct: 435 EALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLI 494

Query: 547 RGFVQNNKKSKVVVLLHKM 565
            G+       K + L   M
Sbjct: 495 SGYSNAGNSQKCLELYETM 513



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 250/485 (51%), Gaps = 5/485 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+   + M K K  P + +F  LL+ L K ++ +    +   +  NG  PD F  +++ +
Sbjct: 155 AIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFD 214

Query: 125 CLCKMGITSGAFVVLGR-ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
            L K    +GA + L R  +      +  T + L+NGLC EG++ +A  + K L      
Sbjct: 215 GLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLV 274

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P  V +NT++NG C+  +   A+   E+M +      +P+ + +NS+ID  C+   +DKA
Sbjct: 275 PGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG---LRPNCIAFNSVIDKFCEMQMIDKA 331

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +E + +M  + I P+V TYN LI G+  +  +     +  EM +NG +P+V+++ ++IN 
Sbjct: 332 EEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINC 391

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CKDGK+ +   +L  M+ RGV P+   YN L+DG C VG++  A   F  M   G    
Sbjct: 392 LCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGAT 451

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +YN LI   CK  K+++A  ++  + S    P VITYN+L+SG    GN    L+L +
Sbjct: 452 IVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYE 511

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M+   + P   TF   I G  K G  L+     + ++      R+  YN +I+   + G
Sbjct: 512 TMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRV-VYNAMIHCYQETG 570

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            ++ A  L   +   G  PD  T +++I    KEG++ +  DL+ DM+AK  +P   T+ 
Sbjct: 571 HVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYS 630

Query: 544 TLLRG 548
            L++G
Sbjct: 631 LLIQG 635



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 262/542 (48%), Gaps = 38/542 (7%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+  F+ M + K  P +  + +L+  L K K+      LF  ++   L P+    N LI+
Sbjct: 85  AMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLID 144

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G    A  +  R+ +    P+ +TFN L++GLC   RI EA  +  ++      P
Sbjct: 145 GYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVP 204

Query: 185 NVVTFNTLINGLCRTRNTL-VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           +  T++ + +GL ++ +    AL L+ E +   G   K D  T + +++GLCK+G V+KA
Sbjct: 205 DGFTYSIIFDGLLKSDDGAGAALDLYREAI---GKGVKIDNYTCSILLNGLCKEGKVEKA 261

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +E+L  + +  + P  + YN+++ G+C + D   A     +M   G++P+ + FN++I+ 
Sbjct: 262 EEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDK 321

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+   +DK    ++ M+ +G+ P   TYN L+DG+  +   SR  ++   M   G + +
Sbjct: 322 FCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPN 381

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V SY  LIN  CKD K+ +A  + R+M+   + P+   YN L+ G   VG L +AL+  D
Sbjct: 382 VISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFD 441

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M  N +     T+ + I GLCK G + EA ++F  I +      + TYN LI+G    G
Sbjct: 442 EMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAG 501

Query: 484 RLKTACKLFHRLQHKG---------PI-------------------------PDVVTCST 509
             +   +L+  ++  G         P+                         PD V  + 
Sbjct: 502 NSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNA 561

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           MIH   + G + KA  L  +M      P   T+ +L+ G ++  K S+   L+  M A+ 
Sbjct: 562 MIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKG 621

Query: 570 LV 571
           L+
Sbjct: 622 LI 623



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 222/448 (49%), Gaps = 4/448 (0%)

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           +ILL  L K  + +    + K L  +GL P   + N ++N  C++G    A + + ++  
Sbjct: 246 SILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMES 305

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
               PN + FN +I+  C    I +A    KK+      P+V T+N LI+G  R      
Sbjct: 306 RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR 365

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
             ++ EEM  E G   KP+V++Y S+I+ LCKDG + +A+ +L  M  R + PN   YN 
Sbjct: 366 CFQILEEM-EENGE--KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI G C V   +EA   F EM  NG+   +VT+N++I   CK GK+ +   +  L+   G
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD +TYNSL+ G+   G   +  EL+ +M   G +  + +++ LI+  C  + ++   
Sbjct: 483 HCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKE 541

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ EML   + P  + YN ++    + G++  A  L  +M    V PD+ T+ + I G 
Sbjct: 542 TLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGH 601

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K G + E   +   ++        +TY+ LI G C +     A   +  +   G +P+V
Sbjct: 602 LKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNV 661

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEA 532
             C+ +   L K+G++ +A  +  +M A
Sbjct: 662 CICNELSTGLRKDGRLQEAQSICSEMIA 689



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  +   M+    +P + ++ IL+    +   +     + + +  NG  P++     L
Sbjct: 329 DKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSL 388

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INCLCK G    A +VL  ++     PN   +N LI+G C  G++ EA R F +++    
Sbjct: 389 INCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGI 448

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK-PDVVTYNSIIDGLCKDGFVD 241
              +VT+N+LI GLC+    +  LK  EEM     +    PDV+TYNS+I G    G   
Sbjct: 449 GATIVTYNSLIKGLCK----MGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQ 504

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           K  EL   MK   + P + T++ LI G C  +  K  + LF EM+   + PD V +NAMI
Sbjct: 505 KCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMI 563

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   + G + K   L + M+  GV PD  TYNSL+ G    G++S  ++L   M +KG  
Sbjct: 564 HCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLI 623

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  +Y++LI  +C  +    A   YREML     P+V   N L +GL + G L +A  +
Sbjct: 624 PEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSI 683

Query: 422 IDKMQLN 428
             +M  N
Sbjct: 684 CSEMIAN 690



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 223/475 (46%), Gaps = 41/475 (8%)

Query: 161 LCAEGRIM-EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
           +C+E ++  + + L+  +      P+      ++  L  ++     L LF+EMV   G  
Sbjct: 5   VCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMV---GLG 61

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
            +PD + Y   +    K G +  A EL   MK R + PNV  YN LI G C     ++A+
Sbjct: 62  FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAE 121

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            LF EM    + P+ VTFN +I+  CK G++D    L E M +  V P  +T+NSL+ G 
Sbjct: 122 KLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGL 181

Query: 340 CLVGRISRAR------------------------------------ELFVSMVSKGCRHD 363
           C   RI  AR                                    +L+   + KG + D
Sbjct: 182 CKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKID 241

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            Y+ +IL+N  CK+ KVE A  + + ++   + P  + YNT+++G  Q+G++  A+  I+
Sbjct: 242 NYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIE 301

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+   + P+   F + ID  C+   + +A +  + +        +ETYN LI+G  ++ 
Sbjct: 302 QMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLC 361

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
                 ++   ++  G  P+V++  ++I+ LCK+G++ +A  +L DM  +  +P+   + 
Sbjct: 362 VFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYN 421

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            L+ G     K  + +    +M+   +  + ++ +S ++  L K  K +E    F
Sbjct: 422 MLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNS-LIKGLCKMGKLKEAEEMF 475



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 193/395 (48%), Gaps = 6/395 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+   + M      P   +F  ++    + +  D      K++   G+ P +   N+L
Sbjct: 294 DRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNIL 353

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   ++ + S  F +L  +  +   PN +++  LIN LC +G+I+EA  + + +     
Sbjct: 354 IDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGV 413

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            PN   +N LI+G C       AL+ F+EM  N  GA     +VTYNS+I GLCK G + 
Sbjct: 414 LPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGAT----IVTYNSLIKGLCKMGKLK 469

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A+E+   +      P+VITYNSLI G+    + ++   L+  M   G++P + TF+ +I
Sbjct: 470 EAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLI 529

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K+G   K   L   M+Q  ++PD V YN+++  +   G + +A  L   MV  G R
Sbjct: 530 SGCSKEGIKLK-ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVR 588

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YN LI  + K+ K+ +   L  +M ++ + P   TY+ L+ G   + +   A   
Sbjct: 589 PDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVW 648

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
             +M  N  +P+         GL K+G + EA  +
Sbjct: 649 YREMLENGFLPNVCICNELSTGLRKDGRLQEAQSI 683



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 5/267 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+ FFD M K      + ++  L+  L K  +      +F  + S G  PD+   N LI
Sbjct: 435 EALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLI 494

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +     G +     +   + +    P   TF+ LI+G   EG I     LF ++      
Sbjct: 495 SGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLS 553

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ V +N +I+    T +   A  L +EMV+  G   +PD  TYNS+I G  K+G + + 
Sbjct: 554 PDRVVYNAMIHCYQETGHVQKAFSLQKEMVD-MGV--RPDNKTYNSLILGHLKEGKLSET 610

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K+L+  MK + + P   TY+ LI G C + D+  A   + EM++NG  P+V   N +   
Sbjct: 611 KDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTG 670

Query: 304 NCKDGKMDKVNRLLELMIQRGV-NPDT 329
             KDG++ +   +   MI  G+ N DT
Sbjct: 671 LRKDGRLQEAQSICSEMIANGMDNLDT 697



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 136/260 (52%), Gaps = 6/260 (2%)

Query: 346 SRARELFVSMVSKGCRHDVYSY-NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           S+  EL+  M  +G R   + Y  +++ +  + +K ++ + L++EM+    RP  + Y  
Sbjct: 13  SQVSELYDFMRQEG-RLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGR 71

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF--QAIRN 462
            +    ++G+L  A++L + M+   VVP+ F +   I GLCK   + +A ++F   ++RN
Sbjct: 72  AMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRN 131

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                R+ T+N LI+G CK G +  A  L  R++ +   P ++T ++++  LCK  ++++
Sbjct: 132 L-VPNRV-TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEE 189

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A  +L +++    VP   T+  +  G ++++  +   + L++ A  K V  D    S ++
Sbjct: 190 ARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILL 249

Query: 583 DLLSKDKKYRECLNQFRHLL 602
           + L K+ K  +     + L+
Sbjct: 250 NGLCKEGKVEKAEEVLKSLV 269


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 249/481 (51%), Gaps = 3/481 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD M   K  P + ++T +++   K         +   +   G  P+L   N++I  LC+
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
             +   A  +   ++     P+  T++ LING C E R  EA  +  ++      P  +T
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N LI+G  R  +   A ++ +EMV       + +++ +N++++G+CK G ++KA E++ 
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMV---ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 379

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M ++ + P+  TY+ LI G C   +   A  L  EM    + P V+T++ +IN  C+ G
Sbjct: 380 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 439

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            +   N +L  M+  G+ P+ V Y +LM      GR+  +R +   M  +G   DV+ YN
Sbjct: 440 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 499

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI   CK +++E+A     EML  R+RP+  TY   + G  + G +  A +  ++M   
Sbjct: 500 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 559

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V+P+   +   I+G CK G V EA  VF+ I + +    ++TY+ LI+GL + G++  A
Sbjct: 560 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 619

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             +F  LQ KG +P+  T +++I   CK+G +DKA+ LL +M  K   P  VT+  L+ G
Sbjct: 620 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 679

Query: 549 F 549
            
Sbjct: 680 L 680



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 266/507 (52%), Gaps = 6/507 (1%)

Query: 73  IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
           + +KP P   ++  L+    +    +    +   + + G+  +L + N L+N +CK G  
Sbjct: 314 VGLKPEP--ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM 371

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
             A  ++  ++     P++ T++ LI G C    +  A  L  ++      P V+T++ +
Sbjct: 372 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 431

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           INGLCR  N      +  EMV       KP+ V Y +++    K+G V++++ +L +M++
Sbjct: 432 INGLCRCGNLQGTNAILREMVMNG---LKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 488

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           + I P+V  YNSLI GFC     +EA+   +EM++  ++P+  T+ A I+   K G+M+ 
Sbjct: 489 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 548

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
            +R    M+  GV P+   Y +L++G C  G ++ A  +F  ++S+    DV +Y++LI+
Sbjct: 549 ADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIH 608

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
              ++ K+ +A  ++ E+  + + P+  TYN+L+SG  + GN+  A +L+++M +  + P
Sbjct: 609 GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 668

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D  T+   IDGLCK G +  A  +F  I          TY  +++G CK      A +L 
Sbjct: 669 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 728

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +  +G  PD    + ++++ CKE + +KA DL  +M  K    S V+F TL+ G+ ++
Sbjct: 729 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKS 787

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            K  +   LL +M  ++ + + ++ +S
Sbjct: 788 GKLQEANHLLEEMIEKQFIPNHVTYTS 814



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 248/503 (49%), Gaps = 4/503 (0%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            EA  +   M++ +  P   ++   +   +K  + +     F  + S G+ P++ +   LI
Sbjct: 513  EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 572

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
               CK G  + AF V   IL      +  T++ LI+GL   G++ EA  +F +L      
Sbjct: 573  EGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL 632

Query: 184  PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            PN  T+N+LI+G C+  N   A +L EEM  +      PD+VTYN +IDGLCK G +++A
Sbjct: 633  PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG---INPDIVTYNILIDGLCKAGEIERA 689

Query: 244  KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            K L   ++ R + PN +TY +++ G+C   +   A  L  EM+  GV PD   +N ++N+
Sbjct: 690  KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 749

Query: 304  NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             CK+ K +K   L + M+++G    TV++N+L++G+C  G++  A  L   M+ K    +
Sbjct: 750  CCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPN 808

Query: 364  VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              +Y  LI+ NCK   + +A  L+ EM    + P+  TY +LL G   +GN+ +   L +
Sbjct: 809  HVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFE 868

Query: 424  KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            +M    + PD  T+   ID  C+ G V+EA ++   I      + +  Y+ LI  LCK  
Sbjct: 869  EMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKE 928

Query: 484  RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
                  KL + +   G    + TCS +       G MD+A ++L  M     V +  +  
Sbjct: 929  EFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLG 988

Query: 544  TLLRGFVQNNKKSKVVVLLHKMA 566
             L+ G            LL +MA
Sbjct: 989  DLVDGNQNGANSEDSDNLLKQMA 1011



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 259/521 (49%), Gaps = 6/521 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN   K+G +   +A+     M++    P   ++++L+    + +       L   +  
Sbjct: 361 LLNGVCKAGKM--EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 418

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
             L P +   +++IN LC+ G   G   +L  ++ +   PN V +  L+     EGR+ E
Sbjct: 419 RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEE 478

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           +  + +++      P+V  +N+LI G C+ +    A     EM+       +P+  TY +
Sbjct: 479 SRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR---LRPNAHTYGA 535

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
            IDG  K G ++ A     +M    + PNV  Y +LI G C   +  EA  +F  ++   
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 595

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           V  DV T++ +I+   ++GKM +   +   + ++G+ P+  TYNSL+ G C  G + +A 
Sbjct: 596 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 655

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   M  KG   D+ +YNILI+  CK  ++E A  L+ ++    + P+ +TY  ++ G 
Sbjct: 656 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 715

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            +  N   A +L+++M L  V PD+F +   ++  CK     +A+ +FQ +   K     
Sbjct: 716 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE-KGFAST 774

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            ++N LI G CK G+L+ A  L   +  K  IP+ VT +++I   CK G M +A  L L+
Sbjct: 775 VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLE 834

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           M+ +N +P+  T+ +LL G+      S+V  L  +M A+ +
Sbjct: 835 MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGI 875



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/556 (26%), Positives = 269/556 (48%), Gaps = 39/556 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP    F +L+    K       V++F    +    P L   N L+  L K       + 
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 201

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V   +      P+  T+  +I+  C  G + +A R+  ++    C PN+VT+N +I GLC
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLC 261

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R R    A++L   MV++ G +  PD+ TY+ +I+G C +    +AK +LL+M D  + P
Sbjct: 262 RARLLDEAIELKRSMVDK-GLV--PDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP 318

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
             ITYN+LI GF    D ++A  +  EM+  G++ +++ +N ++N  CK GKM+K   ++
Sbjct: 319 EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIM 378

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M+++GV PD+ TY+ L++G C    ++RA EL   M  +     V +Y+++IN  C+ 
Sbjct: 379 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 438

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF-- 435
             ++    + REM+   ++P+ + Y TL++   + G + ++  ++++M+   ++PD F  
Sbjct: 439 GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCY 498

Query: 436 ---------------------------------TFATYIDGLCKNGFVLEAVQVFQAIRN 462
                                            T+  +IDG  K G +  A + F  + +
Sbjct: 499 NSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLS 558

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
           C     +  Y  LI G CK G +  A  +F  +  +  + DV T S +IH L + G+M +
Sbjct: 559 CGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHE 618

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A  +  +++ K  +P+  T+ +L+ G  +     K   LL +M   K +  D+   + ++
Sbjct: 619 AFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI-KGINPDIVTYNILI 677

Query: 583 DLLSKDKKYRECLNQF 598
           D L K  +     N F
Sbjct: 678 DGLCKAGEIERAKNLF 693



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 239/485 (49%), Gaps = 4/485 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A    D M K K +P + ++++++  L +        ++ + +  NGL P+  V   L+ 
Sbjct: 409 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 468

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
              K G    + ++L R+      P+   +N LI G C   R+ EA     ++      P
Sbjct: 469 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 528

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N  T+   I+G  +     +A + F EM++  G +  P+V  Y ++I+G CK+G V +A 
Sbjct: 529 NAHTYGAFIDGYSKAGEMEIADRYFNEMLS-CGVL--PNVGIYTALIEGHCKEGNVTEAF 585

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            +   +  R +  +V TY+ LI G        EA  +F E+ + G+ P+  T+N++I+ +
Sbjct: 586 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 645

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK G +DK ++LLE M  +G+NPD VTYN L+DG C  G I RA+ LF  +  +G   + 
Sbjct: 646 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 705

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y  +++  CK +    A  L  EML   + P    YN +L+   +      AL L  +
Sbjct: 706 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE 765

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M L      + +F T I+G CK+G + EA  + + +   +      TY  LI+  CK G 
Sbjct: 766 M-LEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 824

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +  A +L+  +Q +  +P   T ++++H     G M + + L  +M AK   P ++T+  
Sbjct: 825 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYV 884

Query: 545 LLRGF 549
           ++  +
Sbjct: 885 MIDAY 889



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 208/410 (50%), Gaps = 16/410 (3%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+T  EA   F  ++  +    + ++++L+  L++N +      +F  L   GL P+
Sbjct: 577 KEGNVT--EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 634

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            F  N LI+  CK G    A  +L  +      P+ VT+N LI+GLC  G I  A  LF 
Sbjct: 635 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFD 694

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      PN VT+  +++G C+++N   A +L EEM+        PD   YN I++  C
Sbjct: 695 DIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG---VPPDAFIYNVILNFCC 751

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+   +KA +L  +M ++    + +++N+LI G+C     +EA  L  EM++    P+ V
Sbjct: 752 KEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 810

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+ ++I++NCK G M +  RL   M +R V P   TY SL+ G+  +G +S    LF  M
Sbjct: 811 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 870

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V+KG   D  +Y ++I+A C++  V +A  L  E+L + +  SV  Y+ L+  L +    
Sbjct: 871 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEF 930

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL-----EAVQVFQAI 460
            + LKL     LN++    F        +   GF +     EA +V +++
Sbjct: 931 FEVLKL-----LNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 236/486 (48%), Gaps = 8/486 (1%)

Query: 46   SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
            +   F++   K+G +    A  +F+ M+     P +  +T L+    K        S+F+
Sbjct: 532  TYGAFIDGYSKAGEMEI--ADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 589

Query: 106  RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
             + S  +  D+   ++LI+ L + G    AF +   +      PN  T+N LI+G C +G
Sbjct: 590  FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 649

Query: 166  RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
             + +A++L +++ +   +P++VT+N LI+GLC+      A  LF+++    G    P+ V
Sbjct: 650  NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE---GRGLTPNCV 706

Query: 226  TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD-WKEAKCLFIE 284
            TY +++DG CK      A +LL +M  R + P+   YN +I  FCC ++ +++A  LF E
Sbjct: 707  TYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN-VILNFCCKEEKFEKALDLFQE 765

Query: 285  MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
            M++ G     V+FN +I   CK GK+ + N LLE MI++   P+ VTY SL+D  C  G 
Sbjct: 766  MLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 824

Query: 345  ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
            +  A+ L++ M  +       +Y  L++       + +   L+ EM+++ I P  +TY  
Sbjct: 825  MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYV 884

Query: 405  LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            ++    + GN+ +A KL D++ +  +      +   I  LCK     E +++   I    
Sbjct: 885  MIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESG 944

Query: 465  CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
              L + T + +  G    G +  A ++   +   G + +  +   ++         + ++
Sbjct: 945  FRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSD 1004

Query: 525  DLLLDM 530
            +LL  M
Sbjct: 1005 NLLKQM 1010



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 199/385 (51%), Gaps = 9/385 (2%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD----WKE 277
           P+ V ++ ++D   K GF+ +A  + L  K+    P++++ NSL+      +     WK 
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK- 201

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
              +F  M  + V PDV T+  MI+ +CK G +    R+L  M ++G +P+ VTYN ++ 
Sbjct: 202 ---VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIG 258

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C    +  A EL  SMV KG   D+Y+Y+ILIN  C +++  +A  +  EM+   ++P
Sbjct: 259 GLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP 318

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
             ITYN L+ G  + G++  A ++ D+M    +  +   + T ++G+CK G + +A+++ 
Sbjct: 319 EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIM 378

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           Q +     E   +TY+ LI G C+   +  A +L   ++ +   P V+T S +I+ LC+ 
Sbjct: 379 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 438

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G +   N +L +M      P+ V + TL+    +  +  +  ++L +M  E+ ++ D+  
Sbjct: 439 GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM-REQGILPDVFC 497

Query: 578 SSKVVDLLSKDKKYRECLNQFRHLL 602
            + ++    K K+  E       +L
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEML 522


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/477 (32%), Positives = 244/477 (51%), Gaps = 3/477 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV F + M K   SP   ++  +L  L K  +      L   + S GL P+    N+L+
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CKMG    A  V+  + ++   P+  T+N LINGLC EGRI EA +L  ++      
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL 345

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VV++NTLING         A KL EEM +E G   KP+ VT+N ++   CK+G +D A
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEM-SEKGV--KPNAVTHNIMVKWYCKEGKMDDA 402

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
              + +M++   +P+ +TYN+LI G+C   +  EA     EM    ++ D VT N ++  
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C++ K+++  +LL    +RG   D V+Y +L+ G+   G + RA +L+  M  K     
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN +I   C+  K E A+    E+L   + P   TYNT+L G  + G++  A +  +
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           KM  N   PD FT    + GLC  G + +A+++F    +    +   TYN LI  LCK G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           RL  A  L   ++ K   PD  T + +I  L   G++ +A + +  M  K  +P +V
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV 699



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/497 (30%), Positives = 251/497 (50%), Gaps = 3/497 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F+  IK+   P + +F I++       ++   V     +      PD    N +++ LCK
Sbjct: 196 FNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCK 255

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A  +L  +      PN  T+N L+ G C  G + EAA + + +      P+V T
Sbjct: 256 KGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWT 315

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N LINGLC       A KL +EM N       PDVV+YN++I+G  +   + +A +LL 
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMEN---LKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M ++ + PN +T+N ++  +C      +A     +M ++G  PD VT+N +IN  CK G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            M +  R ++ M ++ +  D+VT N+++   C   ++  A +L  S   +G   D  SY 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI    KD  V+ A+ L+ EM  + I PS +TYN ++ GL Q G    A+  ++++  +
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            ++PD  T+ T + G C+ G V +A Q    +     +  + T N L+ GLC  G L+ A
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKA 612

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            KLF+    KG   D VT +T+I  LCKEG++D A +LL +ME K   P   T+  ++  
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672

Query: 549 FVQNNKKSKVVVLLHKM 565
              + +  +    + KM
Sbjct: 673 LTDSGRIREAEEFMSKM 689



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 164/561 (29%), Positives = 276/561 (49%), Gaps = 20/561 (3%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKP---SPGMTSFTILLTMLAKNKQYDTVV 101
           TS +K L D      + S +  + F    KMK     P + +   LL  L +     +V 
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVS 190

Query: 102 SLFKRLNSN-----GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNF 156
             F R   N     G+ P++   N++I   C       A   L  + +   +P+ VT+N 
Sbjct: 191 --FSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNT 248

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           +++ LC +GR+ +A  L   +      PN  T+N L+ G C+      A  + E M    
Sbjct: 249 ILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
                PDV TYN +I+GLC +G +++A +L  +M++  + P+V++YN+LI G        
Sbjct: 309 ---LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKIS 365

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           EA  L  EM + GV+P+ VT N M+ + CK+GKMD  +  +  M + G +PD VTYN+L+
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLI 425

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           +G+C  G +  A      M  K  + D  + N ++   C+++K+E+A   Y+ + S R R
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA---YKLLSSARKR 482

Query: 397 PSVI---TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
              I   +Y TL+ G F+ GN+  ALKL D+M+  +++P + T+   I GLC+ G   +A
Sbjct: 483 GYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           +     +          TYN +++G C+ G ++ A +  +++      PDV TC+ ++  
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           LC EG ++KA  L     +K      VT+ TL+    +  +      LL +M  EK +  
Sbjct: 603 LCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM-EEKELGP 661

Query: 574 DLSLSSKVVDLLSKDKKYREC 594
           D    + ++  L+   + RE 
Sbjct: 662 DHYTYNAIITALTDSGRIREA 682



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 213/441 (48%), Gaps = 26/441 (5%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D M  +K  P + S+  L+    +  +      L + ++  G+ P+    N+++
Sbjct: 331 EAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMV 390

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CK G    A   + ++  S F+P+ VT+N LING C  G + EA R   ++      
Sbjct: 391 KWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMK 450

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            + VT NT++  LCR +    A KL          I   D V+Y ++I G  KDG VD+A
Sbjct: 451 MDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI---DEVSYGTLIVGYFKDGNVDRA 507

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L  +MK++ I P+ +TYN +I G C     ++A     E++++G+ PD  T+N +++ 
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C++G ++K  +    M++    PD  T N L+ G C+ G + +A +LF + VSKG   D
Sbjct: 568 YCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAID 627

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN LI + CK+ +++DA  L  EM  + + P   TYN +++ L   G + +A + + 
Sbjct: 628 TVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMS 687

Query: 424 KMQLNDVVPDS-----------------------FTFATYIDGLCKNGFVLEAVQVFQAI 460
           KM     +P                           ++ +I  LC  G   +A+++F   
Sbjct: 688 KMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGES 747

Query: 461 RNCKCELRIETYNCLINGLCK 481
           +     +   TY  L++GL K
Sbjct: 748 KQKGITVDKSTYINLMDGLIK 768



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 182/396 (45%), Gaps = 38/396 (9%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL------------- 265
           +  P     ++ I    + G    A ++  +MK   + PN++T N+L             
Sbjct: 130 LTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV 189

Query: 266 -------------------------ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
                                    I G+C  + +K+A      M      PD VT+N +
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTI 249

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  CK G++     LL  M  RG+ P+  TYN L+ G+C +G +  A  +   M     
Sbjct: 250 LDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             DV++YN+LIN  C + ++E+A  L  EM + ++ P V++YNTL++G  +   + +A K
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L+++M    V P++ T    +   CK G + +A      +          TYN LING C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G +  A +    +  K    D VT +T++  LC+E ++++A  LL     +     EV
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV 489

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           ++ TL+ G+ ++    + + L  +M  ++++ S ++
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 19/301 (6%)

Query: 40  HFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT 99
           +F D  S    +    K GN+  + A+  +D M + +  P   ++  ++  L +  + + 
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNV--DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
            +S    L  +GL PD    N +++  C+ G    AF    +++ + F P+  T N L+ 
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLR 601

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGA 218
           GLC EG + +A +LF          + VT+NTLI  LC+      A  L  EM   E G 
Sbjct: 602 GLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG- 660

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
              PD  TYN+II  L   G + +A+E + +M ++   P  +                  
Sbjct: 661 ---PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL------------QLDXN 705

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           + +             V ++  I   C +GK     R+     Q+G+  D  TY +LMDG
Sbjct: 706 ETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDG 765

Query: 339 F 339
            
Sbjct: 766 L 766


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 274/534 (51%), Gaps = 40/534 (7%)

Query: 63  NEAVYFFDCMIKMKPS-PGMTSFTILLTMLAKNKQYDTVVSLFKRL----NSNGLFPDLF 117
           ++A+  +  ++K+  S P   +   LL +L K+++ +T   L+  +    N + +  D +
Sbjct: 150 DKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNY 209

Query: 118 VLNLLINCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
             ++++  LC  G I  G  ++  R  + C  PN V +N LI+G C +G +  A +LFKK
Sbjct: 210 TTSIMVKGLCLKGRIEDGIKLIESRWGKGC-VPNIVFYNTLIDGYCKKGEVESAYKLFKK 268

Query: 177 LNVFACDPNVVTFNTLINGLCRT---------------RNTLVALKLFEEMVNEFGAI-- 219
           L +    P + TF +L+NG C+                R   V ++++  +++    +  
Sbjct: 269 LKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGF 328

Query: 220 ---------------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
                          C+PD+VTYN++I+  C  G V++A++LL Q   R + PN +TY  
Sbjct: 329 DIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTP 388

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+ G+C   ++ +A    IEM  +G++ D++++ A+I+     G++D    + + M+ RG
Sbjct: 389 LVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRG 448

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PD   YN LM+G    G++S A+ +   M+ +    D + Y  L++   +   +++A 
Sbjct: 449 ILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAK 508

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L++ ++ + + P V+ YN ++ G  + G + +A+  IDKM+    VPD FTF+T IDG 
Sbjct: 509 KLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGY 568

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K   +   +++F  +    C+  + TY  LING C+ G  K A KLF  ++  G  P V
Sbjct: 569 VKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSV 628

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           VT S +I   CKE ++ KA      M    C P++  F  L+ GF  N K + V
Sbjct: 629 VTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFT-NTKATAV 681



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/450 (30%), Positives = 243/450 (54%), Gaps = 4/450 (0%)

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T + ++ GLC +GRI +  +L +      C PN+V +NTLI+G C+      A KLF+++
Sbjct: 210 TTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKL 269

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
             + G I  P + T+ S+++G CK G  +    LLL+MKDR ++ NV  YN++I     +
Sbjct: 270 KMK-GFI--PTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKL 326

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
               +AK    EM +N  +PD+VT+N +IN+ C  G++++  +LLE  I+RG+ P+ +TY
Sbjct: 327 GFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTY 386

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
             L+ G+C  G  ++A +  + M + G   D+ SY  LI+      +V+ A+ +   M++
Sbjct: 387 TPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMN 446

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             I P    YN L++GLF+ G L  A  ++ +M   ++ PD+F +AT +DG  ++G + E
Sbjct: 447 RGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDE 506

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A ++FQ I     +  +  YN +I G  K G +  A     +++    +PD+ T ST+I 
Sbjct: 507 AKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIID 566

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
              K+  M+    +   M  +NC P+ VT+ +L+ G+ +  +      L   M +  L  
Sbjct: 567 GYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKP 626

Query: 573 SDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           S ++ S  ++    K+ K  + ++ F  +L
Sbjct: 627 SVVTYSI-LIGSFCKEAKLGKAVSYFELML 655



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 212/438 (48%), Gaps = 17/438 (3%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
            K ++ N   PDL   N LIN  C  G    A  +L + +R    PN +T+  L++G C 
Sbjct: 336 LKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCK 395

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           +G   +A     +++    + +++++  LI+GL        AL + + M+N  G +  PD
Sbjct: 396 QGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNR-GIL--PD 452

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
              YN +++GL K G +  AK +L +M D+NI P+   Y +L+ GF    +  EAK LF 
Sbjct: 453 ANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQ 512

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
            +++ G+ P VV +N MI    K G MD     ++ M +    PD  T+++++DG+    
Sbjct: 513 LIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQH 572

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            ++   ++F  MV + C+ +V +Y  LIN  C+  + + A  L+  M S  ++PSV+TY+
Sbjct: 573 NMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYS 632

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            L+    +   LG A+   + M +N   P+   F   ++G         + +      N 
Sbjct: 633 ILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENS 692

Query: 464 KCEL--------------RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           +                 +   YNC++  LC+   +KTA +L +++   G   D V+   
Sbjct: 693 RSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVA 752

Query: 510 MIHWLCKEGQMDKANDLL 527
           +IH +C EG   +  +++
Sbjct: 753 LIHGICLEGNSKEWRNMI 770



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 208/457 (45%), Gaps = 21/457 (4%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP- 79
           N +CS G     +  L     + G +  K        G     E     D +I+M  S  
Sbjct: 356 NHFCSRGEVEEAEK-LLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGL 414

Query: 80  --GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
              M S+  L+  L    + DT +++  R+ + G+ PD  + N+L+N L K G  S A V
Sbjct: 415 EVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKV 474

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +L     P+   +  L++G    G + EA +LF+ +     DP VV +N +I G  
Sbjct: 475 MLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFS 534

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           ++     A+   ++M     A   PD+ T+++IIDG  K   ++   ++   M  +N  P
Sbjct: 535 KSGMMDNAILCIDKMRR---AHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKP 591

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV+TY SLI G+C   + K A+ LF  M  +G++P VVT++ +I   CK+ K+ K     
Sbjct: 592 NVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYF 651

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE--------------LFVSMVSKGCRHD 363
           ELM+     P+   ++ L++GF      + +RE               F  M+  G    
Sbjct: 652 ELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQK 711

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN ++   C+ + V+ A+ L  +ML+  +    +++  L+ G+   GN  +   +I 
Sbjct: 712 AAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMIS 771

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
                  +  +  ++  +D     G + EA  + QA+
Sbjct: 772 CDLNEGELQIALKYSLELDKFIPEGGISEASGILQAM 808



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 135/334 (40%), Gaps = 52/334 (15%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+    +P    +  L+    ++   D    LF+ +   GL P +   N++I    K G+
Sbjct: 479 MLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGM 538

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A + + ++ R+   P+  TF+ +I+G   +  +    ++F  +    C PNVVT+ +
Sbjct: 539 MDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTS 598

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LING CR   T +A KLF  M+   G   KP VVTY+ +I   CK+  + KA      M 
Sbjct: 599 LINGYCRKGETKMAEKLFS-MMRSHG--LKPSVVTYSILIGSFCKEAKLGKAVSYFELML 655

Query: 252 DRNINPNVITYNSLICGFCCV-----------------------------DDWKEAK--- 279
                PN   ++ L+ GF                                D W +     
Sbjct: 656 INKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAY 715

Query: 280 -CLFI----------------EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            C+ I                +M+  G+  D V+F A+I+  C +G   +   ++   + 
Sbjct: 716 NCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLN 775

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
            G     + Y+  +D F   G IS A  +  +M+
Sbjct: 776 EGELQIALKYSLELDKFIPEGGISEASGILQAMI 809



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 13/284 (4%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +  + A+   D M +    P + +F+ ++    K    + V+ +F  +      P+
Sbjct: 535 KSGMM--DNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPN 592

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LIN  C+ G T  A  +   +      P+ VT++ LI   C E ++ +A   F+
Sbjct: 593 VVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFE 652

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALK----------LFEEMVNE-FGAICKPDV 224
            + +  C PN   F+ L+NG   T+ T V+ +          +FE+  +   G       
Sbjct: 653 LMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKA 712

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
             YN I+  LC+   V  A +L  +M    +  + +++ +LI G C   + KE + +   
Sbjct: 713 AAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISC 772

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            ++ G     + ++  ++    +G + + + +L+ MI+  V+P+
Sbjct: 773 DLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 166/491 (33%), Positives = 252/491 (51%), Gaps = 7/491 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K    P    +  L+  L++  Q    + L + +   G  PD+   N +I+ LCK+  
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  ++ R+L   F P+ +T+ FL++GLC  G++ EA ++  K+    C PN    NT
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI---PC-PNNAILNT 359

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LING   +     A     E +  FG   +PD+ TYN ++ GLCK+G +  A++L+ +M 
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGF--QPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R   PNVITY  L+ G C     +EA  +  EM   G+  + V +N +I   C+  K+ 
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               LL  M  +G  PD  TYNSL+ G C V RI  A  LF +M+  G   +  +YN LI
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +A  +    + A+ L  +ML        ITYN L+    +VGN+   L+L ++M ++ + 
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            D+ +    I+GLCK G V  A +  +   N      I TYN ++NGLCK+GR+K A  L
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNL 657

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV- 550
           F RLQ +G  PD  T +T I W CKEG ++ A            VPS +T+  L+   + 
Sbjct: 658 FDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLK 717

Query: 551 QNNKKSKVVVL 561
           Q+N+++   VL
Sbjct: 718 QSNQENNFFVL 728



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 257/493 (52%), Gaps = 10/493 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   S+ ++L +L          ++F  + S G+ P +F   +++  LC       A  
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACS 239

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  + +    PN++ +  LI+ L  + ++ EA +L +++ V  C P+V TFN +I+GLC
Sbjct: 240 LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 299

Query: 198 RTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           +      A KL + M+   F     PD +TY  ++ GLC+ G +++A+++L+++      
Sbjct: 300 KVNKIHDATKLVDRMLLRGF----YPDNMTYGFLLHGLCRIGKLNEARKILIKIP----C 351

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNR 315
           PN    N+LI G+      KEA+    E M N G QPD+ T+N +++  CK+G +     
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L+  M +RG  P+ +TY  L++G C  G +  A  +   M ++G   +   YN LI A C
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           + +KV  A+ L  EM ++  +P + TYN+L+ GL +V  + +A +L   M L+  V ++ 
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+ T I  L + G   +A+ +   +    C L   TYN LI   CK+G ++   +L+ ++
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G   D ++C+ MI+ LCK G++D A + L D   +  VP  VT+ ++L G  +  + 
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 556 SKVVVLLHKMAAE 568
            + + L  ++  E
Sbjct: 652 KEALNLFDRLQVE 664



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 202/409 (49%), Gaps = 4/409 (0%)

Query: 17  GYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           G+  +  C  G+    +  L      +   +   +N    SG +   ++ +  + MI   
Sbjct: 327 GFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQS-FLNETMINFG 385

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
             P + ++ IL+  L K         L   ++  G  P++    +L+N LCK G+   A 
Sbjct: 386 FQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAG 445

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
           +VL  +     T N+V +N LI  LC + ++  A  L  ++    C P++ T+N+LI GL
Sbjct: 446 LVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGL 505

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+      A +LF  M+ + GA+   + VTYN++I  L + G   KA  L+  M  R   
Sbjct: 506 CKVDRIDEAFRLFHNMLLD-GAVA--NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCT 562

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
            + ITYN LI  FC V + ++   L+ +M+ +G+  D ++ N MIN  CK GK+D     
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L   I RG  PD VTYNS+++G C VGRI  A  LF  +  +G R D ++YN  I+  CK
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +  V DA   +   +     PS +T+N L+  L +  N  +   ++D++
Sbjct: 683 EGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 240/516 (46%), Gaps = 45/516 (8%)

Query: 99  TVVSLFKRLNSNGLFPDLF-VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV----T 153
           T++ +F+R+     +   F V  + IN   K+G   G F ++ ++L        V     
Sbjct: 94  TLLEIFERVGGQKGYCHTFDVYYVFIN---KLGAI-GKFKLIDKLLMQMKEEGIVFRESI 149

Query: 154 FNFLINGLCAEGRIMEAARLFKKLN-VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           F  ++      G+  +A RL   +  V+ C+P   +++ ++  L       VA  +F +M
Sbjct: 150 FMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDM 209

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           +++      P V T+  ++  LC    VD A  LL  M      PN I Y +LI      
Sbjct: 210 LSKG---VSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK 266

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           +   EA  L  EM   G  PDV TFN +I+  CK  K+    +L++ M+ RG  PD +TY
Sbjct: 267 NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTY 326

Query: 333 NSLMDGFCLVGRISRARELFV--------------------------------SMVSKGC 360
             L+ G C +G+++ AR++ +                                +M++ G 
Sbjct: 327 GFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGF 386

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
           + D+++YNIL++  CK+  +  A  L  EM      P+VITY  L++GL + G L +A  
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGL 446

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           ++ +M    +  +S  +   I  LC+   V  A+ +   +    C+  + TYN LI GLC
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLC 506

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K+ R+  A +LFH +   G + + VT +T+IH L + G   KA  L+ DM  + C   ++
Sbjct: 507 KVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKI 566

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           T+  L++ F +     K + L  +M  + L    +S
Sbjct: 567 TYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTIS 602



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 190/386 (49%), Gaps = 6/386 (1%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           +C+P   +Y+ +++ L        A  +   M  + ++P V T+  ++   C  ++   A
Sbjct: 178 LCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSA 237

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             L  +M  +G  P+ + +  +I+   +  ++ +  +LLE M   G  PD  T+N ++ G
Sbjct: 238 CSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHG 297

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C V +I  A +L   M+ +G   D  +Y  L++  C+  K+ +A    R++L +   P+
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPN 353

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLN-DVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
               NTL++G    G L +A   +++  +N    PD FT+   + GLCK G +  A  + 
Sbjct: 354 NAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             +    CE  + TY  L+NGLCK G L+ A  + H +  +G   + V  + +I  LC++
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK 473

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
            ++  A +LL +M  K C P   T+ +L+ G  + ++  +   L H M  +  V ++++ 
Sbjct: 474 EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTY 533

Query: 578 SSKVVDLLSKDKKYRECLNQFRHLLF 603
           ++ +  LL +   +++ L     +LF
Sbjct: 534 NTLIHALLRRG-AFQKALTLVNDMLF 558


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 245/463 (52%), Gaps = 5/463 (1%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F D  +    ++ R ++G++ +  A+   D M+     PG+ ++  +L  L +N ++D  
Sbjct: 191 FPDVVTHNVMVDARFRAGDVEA--AMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKA 248

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
             +F+ +++ G+ PD+   N+LI   C+ G    A      +     TP+ V+F+ LI  
Sbjct: 249 REVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGL 308

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
               G +  AA   +++  F   P+ V +  +I G CR    L AL++ +EMV  FG  C
Sbjct: 309 FTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMV-AFG--C 365

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PDVVTYN++++GLCK+  +  A+ELL +MK+R + P++ T+ +LI G+C   + ++A  
Sbjct: 366 LPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQ 425

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            F  + D  ++PD+VT+N +I+  C+ G + K N L + M  R + P+ VTY+ L+D  C
Sbjct: 426 FFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHC 485

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G++  A      MV+KG   ++ +YN +I   C+   V        +M  +++ P +I
Sbjct: 486 EKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLI 545

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYNTL+ G  + G + +A  L+  M+  +V PD+ T+   I G   +G + EA  V++ +
Sbjct: 546 TYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKM 605

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
                E    TY  +ING    G  K + +L   +  KG  PD
Sbjct: 606 GARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 248/492 (50%), Gaps = 3/492 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++    K  Q+  V ++   +    +FPD+   N++++   + G    A  ++  +
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +     P  VT+N ++ GL   GR  +A  +F+ ++     P+V +FN LI G CR    
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             AL+ ++EM    G    PDVV+++ +I    + G +D A E L +M++  + P+ + Y
Sbjct: 281 EEALRFYKEMR---GRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             +I GFC      EA  +  EM+  G  PDVVT+N ++N  CK+ ++     LL  M +
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RGV PD  T+ +L+ G+C  G I +A + F ++  +  R D+ +YN LI+  C+   +  
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK 457

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+ +M S  I P+ +TY+ L+    + G + +A   +D+M    +VP+  T+ + I 
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIK 517

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G C++G V +  Q    +R+ K    + TYN LI+G  K G++  A  L   ++++   P
Sbjct: 518 GYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQP 577

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D VT + +I      G M +A+ +   M A+   P   T+ +++ G V      K   L 
Sbjct: 578 DAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLH 637

Query: 563 HKMAAEKLVVSD 574
            +M  + L   D
Sbjct: 638 DEMLQKGLAPDD 649



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 235/454 (51%), Gaps = 3/454 (0%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           + LN++++  CK         V+  + + C  P+ VT N +++     G +  A  L   
Sbjct: 160 YTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDS 219

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P +VT+N+++ GL R      A ++F  M +  G    PDV ++N +I G C+
Sbjct: 220 MVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM-DACG--VAPDVRSFNMLIGGFCR 276

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G +++A     +M+ R + P+V++++ LI  F    +   A     EM + G+ PD V 
Sbjct: 277 AGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVI 336

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +I   C+ G M +  R+ + M+  G  PD VTYN+L++G C   R+S A EL   M 
Sbjct: 337 YTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMK 396

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +G   D+ ++  LI+  C+D  +E A+  +  +  +R+RP ++TYNTL+ G+ + G+LG
Sbjct: 397 ERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLG 456

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A +L D M   ++ P+  T++  ID  C+ G V  A      + N      I TYN +I
Sbjct: 457 KANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            G C+ G +    +   +++H   +PD++T +T+IH   KEG+M +A +LL  ME +N  
Sbjct: 517 KGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQ 576

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           P  VT+  ++ GF  +    +   +  KM A  +
Sbjct: 577 PDAVTYNMIISGFSVHGNMQEADWVYKKMGARGI 610



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 229/455 (50%), Gaps = 39/455 (8%)

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +L S    NT T N +++  C   +  E   +  ++      P+VVT N +++   R  +
Sbjct: 150 VLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGD 209

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A+ L + MV++     KP +VTYNS++ GL ++G  DKA+E+   M    + P+V +
Sbjct: 210 VEAAMALIDSMVSKG---IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRS 266

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +N LI GFC   + +EA   + EM    V PDVV+F+ +I    + G+MD     L  M 
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           + G+ PD V Y  ++ GFC  G +  A  +   MV+ GC                     
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCL-------------------- 366

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
                          P V+TYNTLL+GL +   L DA +L+++M+   V PD  TF T I
Sbjct: 367 ---------------PDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLI 411

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            G C++G + +A+Q F  I + +    I TYN LI+G+C+ G L  A +L+  +  +   
Sbjct: 412 HGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIF 471

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P+ VT S +I   C++GQ+D A   L +M  K  VP+ +T+ ++++G+ ++   SK    
Sbjct: 472 PNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQF 531

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           L KM  +K V+ DL   + ++    K+ K  E  N
Sbjct: 532 LPKMRHDK-VMPDLITYNTLIHGYVKEGKMHEAFN 565


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 178/630 (28%), Positives = 286/630 (45%), Gaps = 89/630 (14%)

Query: 38  SHHFKDGT--SIAKFLNDR-----------HKSGNITSNEAVY----FFDCMIKMKPSPG 80
           SH ++ GT  ++A+ L D            H   +  S EA+     F D + +     G
Sbjct: 290 SHSYRPGTFAALARRLVDARRYAAAGRARIHLIKSCHSKEAMARTMSFLDMLSQSGLRMG 349

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + +++ LL  L++      V+  + R+ S G+ P+L + N +IN LCK G  + A  ++ 
Sbjct: 350 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 409

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           ++  S  +P+T T+  +I G C +  +  A ++F ++    C+PN VT++TLINGLC + 
Sbjct: 410 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 469

Query: 201 NTLVALKLFEEMVNE---------FGAI-----------------------CKPDVVTYN 228
               A  L  EM+            G I                       C+P+V TY 
Sbjct: 470 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 529

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC--------------------- 267
           ++I GLC  G +  A  L  +M    + PN +TYN+LI                      
Sbjct: 530 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 589

Query: 268 --------------GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
                         G+C + D K+A  +   M+  G   ++VT+N +I   C  G     
Sbjct: 590 GLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 649

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
            R+L+LM   G  PD  +Y  L+ GFC + ++  A  LF  MV  G   +  +Y  LI+ 
Sbjct: 650 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 709

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CKD+K++ A  L   M     RP+V TYN L+ GL +  N   A +L   M    + P+
Sbjct: 710 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 769

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   IDGLCKNG    A+++F  +    C   + TY+ LI  L + G+++ A  LF 
Sbjct: 770 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 829

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            L+  G IPD +T   MI      G+++ A + L  M    C P+  T+  L++G     
Sbjct: 830 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL---- 885

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            K++ ++   ++AA   VV + S   +  D
Sbjct: 886 -KNEYLLADQRLAALPDVVPNCSFGYQTTD 914



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 243/543 (44%), Gaps = 64/543 (11%)

Query: 65   AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
            A+  F  M +    P   ++  L+ +L +N++      +   +  NGLF ++   N +I 
Sbjct: 544  AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIK 603

Query: 125  CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
              C +G    A +V+  +L+   + N VT+N +I G C  G    A R+   +    C P
Sbjct: 604  GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 663

Query: 185  NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
            +  ++  LI G C+      A  LF EMV++   +C P+ VTY ++IDG CKD  +D A 
Sbjct: 664  DEWSYTELICGFCKISKMESAFGLFNEMVDD--GLC-PNEVTYTALIDGYCKDEKLDTAT 720

Query: 245  ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
             LL  MK     PNV TYN LI G    +++  A+ L   M++ G+ P+VVT+ AMI+  
Sbjct: 721  SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 780

Query: 305  CK-----------------------------------DGKMDKVNRLLELMIQRGVNPDT 329
            CK                                   +GK+++   L   + + G+ PD 
Sbjct: 781  CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 840

Query: 330  VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN-----CKDQKV---- 380
            +TY  +++ + + G++  A      M+  GC+  +++Y +LI          DQ++    
Sbjct: 841  ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 900

Query: 381  --------------EDAVCLYREMLSERIRP--SVITYNTLLSGLFQVGNLGDALKLIDK 424
                          +DAV +    L+E + P  SV   N L+S L   G   +A +L+  
Sbjct: 901  DVVPNCSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQNALVSNLSTAGRWFEANELLGS 959

Query: 425  MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
            M    + PD   + + +  L +   V  A+ VF+ +    CE+ +  Y  LI  LC++ R
Sbjct: 960  MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 1019

Query: 485  LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
             K A   F  +  +   PD V  + +I  L ++G  D   + L  ME +  +PS   +  
Sbjct: 1020 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTI 1079

Query: 545  LLR 547
            L R
Sbjct: 1080 LAR 1082



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 197/405 (48%), Gaps = 3/405 (0%)

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C ++  +     F +M+++ G   +  +  Y++++  L + G      +   +M    + 
Sbjct: 325 CHSKEAMARTMSFLDMLSQSG--LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQ 382

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN++ YN++I   C   +  +A+ +  ++ ++ + PD  T+ +MI  +C+   +D   ++
Sbjct: 383 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 442

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M + G  P+TVTY++L++G C  GR++ A +L   M+  G     ++    I A C 
Sbjct: 443 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 502

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
               EDA  L+ +M ++   P+V TY  L+SGL   G L  A+ L  +M  + V P++ T
Sbjct: 503 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 562

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   I+ L +N  +  A  V   +        I TYN +I G C +G  K A  + + + 
Sbjct: 563 YNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNML 622

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +G   ++VT +T+I   C  G    A  +L  M    C P E ++  L+ GF + +K  
Sbjct: 623 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 682

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
               L ++M  + L  ++++ ++ ++D   KD+K     +   H+
Sbjct: 683 SAFGLFNEMVDDGLCPNEVTYTA-LIDGYCKDEKLDTATSLLEHM 726


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/477 (32%), Positives = 244/477 (51%), Gaps = 3/477 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV F + M K   SP   ++  +L  L K  +      L   + S GL P+    N+L+
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CKMG    A  V+  + ++   P+  T+N LINGLC EGRI EA +L  ++      
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL 345

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VV++NTLING         A KL EEM +E G   KP+ VT+N ++   CK+G +D A
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEM-SEKGV--KPNAVTHNIMVKWYCKEGKMDDA 402

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
              + +M++   +P+ +TYN+LI G+C   +  EA     EM    ++ D VT N ++  
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C++ K+++  +LL    +RG   D V+Y +L+ G+   G + RA +L+  M  K     
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN +I   C+  K E A+    E+L   + P   TYNT+L G  + G++  A +  +
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           KM  N   PD FT    + GLC  G + +A+++F    +    +   TYN LI  LCK G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           RL  A  L   ++ K   PD  T + +I  L   G++ +A + +  M  K  +P +V
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/497 (30%), Positives = 251/497 (50%), Gaps = 3/497 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F+  IK+   P + +F I++       ++   V     +      PD    N +++ LCK
Sbjct: 196 FNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCK 255

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A  +L  +      PN  T+N L+ G C  G + EAA + + +      P+V T
Sbjct: 256 KGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWT 315

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N LINGLC       A KL +EM N       PDVV+YN++I+G  +   + +A +LL 
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMEN---LKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M ++ + PN +T+N ++  +C      +A     +M ++G  PD VT+N +IN  CK G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            M +  R ++ M ++ +  D+VT N+++   C   ++  A +L  S   +G   D  SY 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI    KD  V+ A+ L+ EM  + I PS +TYN ++ GL Q G    A+  ++++  +
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            ++PD  T+ T + G C+ G V +A Q    +     +  + T N L+ GLC  G L+ A
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKA 612

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            KLF+    KG   D VT +T+I  LCKEG++D A +LL +ME K   P   T+  ++  
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672

Query: 549 FVQNNKKSKVVVLLHKM 565
              + +  +    + KM
Sbjct: 673 LTDSGRIREAEEFMSKM 689



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 260/539 (48%), Gaps = 48/539 (8%)

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           ++LL  +A ++++D  +S+  RL S    P   +L+  I    + G    AF +  ++ R
Sbjct: 109 SLLLGFIATDRRHDLHLSIL-RLTS----PSKALLDTAIGAYVQSGQPHHAFQIFKKMKR 163

Query: 145 SCFTPNTVTFNFLINGLC---AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
               PN +T N L+N L    +   +  +   F         PNV TFN +I G C    
Sbjct: 164 LRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENK 223

Query: 202 TLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
              A+    E +N  G   C PD VTYN+I+D LCK G +  A++LL+ MK R + PN  
Sbjct: 224 FKDAV----EFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRN 279

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TYN L+ G+C +   KEA  +   M  N + PDV T+N +IN  C +G++++  +L + M
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
               + PD V+YN+L++G     +IS A +L   M  KG + +  ++NI++   CK+ K+
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKM 399

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           +DA     +M      P  +TYNTL++G  + GN+G+A + +D+M   ++  DS T  T 
Sbjct: 400 DDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459

Query: 441 IDGLCKNGFVLEAVQVFQAIR----------------------NCKCELRIE-------- 470
           +  LC+   + EA ++  + R                      N    L++         
Sbjct: 460 LRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI 519

Query: 471 -----TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                TYNC+I GLC+ G+ + A    + L   G +PD  T +T++H  C+EG ++KA  
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQ 579

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
               M   +  P   T   LLRG        K + L +   ++   +  ++ ++ +  L
Sbjct: 580 FHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 214/441 (48%), Gaps = 26/441 (5%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D M  +K  P + S+  L+    +  +      L + ++  G+ P+    N+++
Sbjct: 331 EAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMV 390

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CK G    A   + ++  S F+P+ VT+N LING C  G + EA R   ++      
Sbjct: 391 KWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMK 450

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            + VT NT++  LCR +    A KL          I   D V+Y ++I G  KDG VD+A
Sbjct: 451 MDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI---DEVSYGTLIVGYFKDGNVDRA 507

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L  +MK++ I P+ +TYN +I G C     ++A     E++++G+ PD  T+N +++ 
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C++G ++K  +    M++    PD  T N L+ G C+ G + +A +LF + VSKG   D
Sbjct: 568 YCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAID 627

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN LI + CK+ +++DA  L  EM  + + P   TYN +++ L   G + +A + + 
Sbjct: 628 TVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMS 687

Query: 424 KMQLNDVVPDS-----------------------FTFATYIDGLCKNGFVLEAVQVFQAI 460
           KM     +PD                          ++ +I  LC  G   +A+++F   
Sbjct: 688 KMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGES 747

Query: 461 RNCKCELRIETYNCLINGLCK 481
           +     +   TY  L++GL K
Sbjct: 748 KQKGITVDKSTYINLMDGLIK 768



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 19/301 (6%)

Query: 40  HFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT 99
           +F D  S    +    K GN+  + A+  +D M + +  P   ++  ++  L +  + + 
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNV--DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
            +S    L  +GL PD    N +++  C+ G    AF    +++ + F P+  T N L+ 
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLR 601

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGA 218
           GLC EG + +A +LF          + VT+NTLI  LC+      A  L  EM   E G 
Sbjct: 602 GLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG- 660

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
              PD  TYN+II  L   G + +A+E + +M ++   P+ +                + 
Sbjct: 661 ---PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL------------QLDKN 705

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           + +             V ++  I   C +GK     R+     Q+G+  D  TY +LMDG
Sbjct: 706 ETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDG 765

Query: 339 F 339
            
Sbjct: 766 L 766


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 165/571 (28%), Positives = 278/571 (48%), Gaps = 34/571 (5%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G + +  A+  F  M K+  SP + ++  ++  L +N + D    
Sbjct: 242 DVFSFTNVINALCKGGKMEN--AIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFE 299

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L +++   G+ P+L     LIN L K+        VL  ++ S F PN V FN LI+G C
Sbjct: 300 LKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYC 359

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI--- 219
             G I  A ++   +      P  VT  +L+ G C++     A    EE+++   +I   
Sbjct: 360 KMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD 419

Query: 220 ---------CK--------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
                    CK                    P  +    ++ GLCKDG   +A EL  ++
Sbjct: 420 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 479

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
            ++    + +T N+LI G C      EA  +  EM++ G+  D +T+NA+I   C +GK+
Sbjct: 480 LEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKV 539

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           +   RL E M +RG+ PD  TYN L+ G C VG++  A +L+    + G   ++++Y I+
Sbjct: 540 EGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIM 599

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +   CK  ++ED   L+ E+LS+++  + I YN ++    Q GN+  AL+L++ M+   +
Sbjct: 600 MEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGI 659

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +P+  T+++ I G+C  G V +A  +   +R       +  Y  LI G CK+G++ TA  
Sbjct: 660 LPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAES 719

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
            +  +      P+  T + MI   CK G M+KAN+LL+ M+    VP  VT+  L  GF 
Sbjct: 720 TWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFC 779

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           + N       +  +MA E L V +++ ++ V
Sbjct: 780 KANDMDNAFKVCDQMATEGLPVDEITYTTLV 810



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 258/520 (49%), Gaps = 39/520 (7%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  F  + +    P + +   LL+ L K  +++    +F R+ S G  PD+F    +IN
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 251

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK G    A  +  ++ +   +PN VT+N +INGLC  GR+  A  L +K+ V    P
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N+ T+  LINGL +         + +EM+   G+   P+VV +N++IDG CK G ++ A 
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLDEMI---GSGFNPNVVVFNNLIDGYCKMGNIEGAL 368

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG--VQPD----VVTF- 297
           ++   M  +NI P  +T  SL+ GFC  D  + A+    E++ +G  + PD    VV + 
Sbjct: 369 KIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWL 428

Query: 298 -------------NAMINYN---------------CKDGKMDKVNRLLELMIQRGVNPDT 329
                          M++ N               CKDGK  +   L   ++++G     
Sbjct: 429 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 488

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VT N+L+ G C  G++  A  +   M+ +G   D  +YN LI   C + KVE    L  E
Sbjct: 489 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 548

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    I+P + TYN LL GL  VG L DA+KL D+ + + ++ +  T+   ++G CK   
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 608

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +   +F  + + K EL    YN +I   C+ G +  A +L   ++ KG +P+  T S+
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           +IH +C  G ++ A  L+ +M  +  VP+ V +  L+ G+
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGY 708



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 228/468 (48%), Gaps = 39/468 (8%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+  T NFL++ L       +   +F+ ++  AC P+V +F  +IN LC+      A++L
Sbjct: 207 PSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIEL 265

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F +M  + G    P+VVTYN II+GLC++G +D A EL  +M  + + PN+ TY +LI G
Sbjct: 266 FMKM-EKLGI--SPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALING 322

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
              ++ + +   +  EM+ +G  P+VV FN +I+  CK G ++   ++ ++MI + + P 
Sbjct: 323 LIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 382

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKG---------------CR----HDVYSYN- 368
           +VT  SLM GFC   +I  A      ++S G               C+    H  + +  
Sbjct: 383 SVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTK 442

Query: 369 ---------------ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
                          +L+   CKD K  +A  L+  +L +    S +T N L+ GL   G
Sbjct: 443 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAG 502

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L +A +++ +M    +  D  T+   I G C  G V    ++ + +     +  I TYN
Sbjct: 503 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYN 562

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            L+ GLC +G+L  A KL+   +  G I ++ T   M+   CK  +++   +L  ++ +K
Sbjct: 563 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 622

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
               + + +  +++   QN   +  + LL  M ++ ++ +  + SS +
Sbjct: 623 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLI 670



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 168/341 (49%), Gaps = 4/341 (1%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           +F  + K  P+  +TS   L+  L    +      + K +   GL  D    N LI   C
Sbjct: 476 WFRLLEKGSPASKVTS-NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFC 534

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
             G   G F +   + +    P+  T+NFL+ GLC  G++ +A +L+ +        N+ 
Sbjct: 535 NEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIH 594

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+  ++ G C+         LF E++++   +   + + YN II   C++G V  A +LL
Sbjct: 595 TYGIMMEGYCKANRIEDVENLFNELLSKKMEL---NSIVYNIIIKAHCQNGNVAAALQLL 651

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             MK + I PN  TY+SLI G C +   ++AK L  EM   G  P+VV + A+I   CK 
Sbjct: 652 ENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKL 711

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G+MD        MI   ++P+  TY  ++DG+C +G + +A  L + M   G   DV +Y
Sbjct: 712 GQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTY 771

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           N+L N  CK   +++A  +  +M +E +    ITY TL+ G
Sbjct: 772 NVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 182/388 (46%), Gaps = 38/388 (9%)

Query: 91  LAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
           L K  +Y +     K + S    P   +L +L+  LCK G    A  +  R+L      +
Sbjct: 428 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 487

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
            VT N LI+GLC  G++ EA+R+ K++       + +T+N LI G C         +L E
Sbjct: 488 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 547

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           EM        +PD+ TYN ++ GLC  G +D A +L  + K   +  N+ TY  ++ G+C
Sbjct: 548 EMTKRG---IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYC 604

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
             +  ++ + LF E++   ++ + + +N +I  +C++G +    +LLE M  +G+ P+  
Sbjct: 605 KANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCA 664

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TY+SL+ G C +G +  A+ L   M  +G   +V  Y  LI   CK  +++ A   + EM
Sbjct: 665 TYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 724

Query: 391 LSERIRPS-----------------------------------VITYNTLLSGLFQVGNL 415
           +S  I P+                                   V+TYN L +G  +  ++
Sbjct: 725 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDM 784

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDG 443
            +A K+ D+M    +  D  T+ T + G
Sbjct: 785 DNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 135/268 (50%), Gaps = 3/268 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K    P + ++  LL  L    + D  + L+    ++GL  ++    +++   CK   
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 608

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
                 +   +L      N++ +N +I   C  G +  A +L + +      PN  T+++
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+G+C       A  L +EM  E G +  P+VV Y ++I G CK G +D A+   L+M 
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKE-GFV--PNVVCYTALIGGYCKLGQMDTAESTWLEMI 725

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             NI+PN  TY  +I G+C + + ++A  L I+M ++G+ PDVVT+N + N  CK   MD
Sbjct: 726 SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMD 785

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGF 339
              ++ + M   G+  D +TY +L+ G+
Sbjct: 786 NAFKVCDQMATEGLPVDEITYTTLVHGW 813


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 246/466 (52%), Gaps = 3/466 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+    + K+ +  +  F  +   G  P++   N +++   K+  T  A+V+   + 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R     +  TFN +IN LC EG++ +A      +      PNVVT+NT+I+G C      
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  +F+ M ++     +PD  TYNS I GLCK+G +++A  L+ +M +  + PN +TYN
Sbjct: 269 RARVIFQTMKDKG---LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI G+C   D  +A     EM+  G+   +VT+N  I+    +G+M   + +++ M ++
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD VT+N L++G+C  G   RA  L   MV KG +  + +Y  LI    K  ++++A
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+ ++  E + P +I +N L+ G    GN+  A +L+ +M    V+PD  T+ T + G
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C+ G V EA Q+   ++    +    +YN LI+G  K G +K A ++   +   G  P 
Sbjct: 506 YCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPT 565

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++T + +I  LCK  + + A +LL +M +K   P + T+ +++   
Sbjct: 566 ILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 252/529 (47%), Gaps = 9/529 (1%)

Query: 47  IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR 106
           ++   N  H     TS+ A+     +   KPS  +    IL         +D +     R
Sbjct: 81  LSHLQNHPHSLDLATSSLAICVLYRLPSPKPSINLIQRLILSPTCTNRTIFDELALARDR 140

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           +++        + +LL+   C++   + A      I    F PN  T N +++      R
Sbjct: 141 VDAK----TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNR 196

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVV 225
              A  L+ ++       ++ TFN +IN LC+       LK  +E +     +  KP+VV
Sbjct: 197 TQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGK----LKKAKEFIGHMETLGVKPNVV 252

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TYN+II G C  G   +A+ +   MKD+ + P+  TYNS I G C     +EA  L  +M
Sbjct: 253 TYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM 312

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           ++ G+ P+ VT+NA+I+  C  G +DK     + MI +G+    VTYN  +    + GR+
Sbjct: 313 LEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRM 372

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A  +   M  KG   D  ++NILIN  C+    + A  L  EM+ + I+P+++TY +L
Sbjct: 373 GDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSL 432

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           +  L +   + +A  L  K+Q   ++PD   F   IDG C NG +  A Q+ + + N K 
Sbjct: 433 IYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKV 492

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                TYN L+ G C+ G+++ A +L   ++ +G  PD ++ +T+I    K G M  A  
Sbjct: 493 LPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFR 552

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           +  +M      P+ +T+  L++G  +N +      LL +M ++ +   D
Sbjct: 553 VRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDD 601



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 202/412 (49%), Gaps = 32/412 (7%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A   +  M +M     + +F I++ +L K  +          + + G+ P++   N +I+
Sbjct: 200 AWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIH 259

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C  G    A V+   +      P+  T+N  I+GLC EGR+ EA+ L  K+      P
Sbjct: 260 GHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVP 319

Query: 185 NVVTFNTLINGLCRTRN------------------TLVALKLF-------------EEMV 213
           N VT+N LI+G C   +                  +LV   LF             + M+
Sbjct: 320 NAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMI 379

Query: 214 NEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
            E       PD VT+N +I+G C+ G   +A  LL +M  + I P ++TY SLI      
Sbjct: 380 KEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKR 439

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           +  KEA  LF ++   G+ PD++ FNA+I+ +C +G +D+  +LL+ M    V PD +TY
Sbjct: 440 NRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITY 499

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N+LM G+C  G++  AR+L   M  +G + D  SYN LI+   K   ++DA  +  EM++
Sbjct: 500 NTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMT 559

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
               P+++TYN L+ GL +      A +L+ +M    + PD  T+ + I+ +
Sbjct: 560 TGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 178/351 (50%), Gaps = 3/351 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A   F  M      P   ++   ++ L K  + +    L  ++   GL P+    N LI+
Sbjct: 270 ARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALID 329

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C  G    A+     ++      + VT+N  I+ L  EGR+ +A  + K++      P
Sbjct: 330 GYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMP 389

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + VT N LING CR  +   A  L +EMV   G   +P +VTY S+I  L K   + +A 
Sbjct: 390 DAVTHNILINGYCRCGDAKRAFGLLDEMV---GKGIQPTLVTYTSLIYVLGKRNRMKEAD 446

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            L  +++   + P++I +N+LI G C   +   A  L  EM +  V PD +T+N ++   
Sbjct: 447 ALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGY 506

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C++GK+++  +LL+ M +RG+ PD ++YN+L+ G+   G +  A  +   M++ G    +
Sbjct: 507 CREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTI 566

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            +YN LI   CK+Q+ E A  L +EM+S+ I P   TY +++  +  V +L
Sbjct: 567 LTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDL 617



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 147/301 (48%), Gaps = 1/301 (0%)

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            + F+ ++   C+  K ++      L+ ++G  P+  T N ++  F  + R   A  L+ 
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M     R  +Y++NI+IN  CK+ K++ A      M +  ++P+V+TYNT++ G    G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
               A  +   M+   + PD +T+ ++I GLCK G + EA  +   +          TYN
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI+G C  G L  A      +  KG +  +VT +  IH L  EG+M  A++++ +M  K
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             +P  VT   L+ G+ +     +   LL +M  + +  + ++ +S ++ +L K  + +E
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTS-LIYVLGKRNRMKE 444

Query: 594 C 594
            
Sbjct: 445 A 445



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 3/215 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +  A    D M+     P + ++T L+ +L K  +     +LF ++   GL PD+ V N 
Sbjct: 407 AKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNA 466

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+  C  G    AF +L  +      P+ +T+N L+ G C EG++ EA +L  ++    
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ +++NTLI+G  +  +   A ++ +EM+        P ++TYN++I GLCK+   +
Sbjct: 527 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMMT---TGFDPTILTYNALIQGLCKNQEGE 583

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
            A+ELL +M  + I P+  TY S+I     VDD +
Sbjct: 584 HAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 163/550 (29%), Positives = 272/550 (49%), Gaps = 29/550 (5%)

Query: 66  VYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           V  FD + + K     + ++   L  LAK          F+++   G  PD F  ++++ 
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLR 81

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV-FACD 183
            LCK G    A  +LG++  S    N +T++ +I+G C   R+ +A  +FK ++    C 
Sbjct: 82  GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCV 141

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VVTFN+L+ GLC       A  LFE M     A C+P+V++Y++++DGLCK G +D+A
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAK---AGCEPNVISYSTLLDGLCKAGRLDEA 198

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF------ 297
             L  +M +++  P+++ Y S + G C  +   EA     +M+  G + D V F      
Sbjct: 199 CRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258

Query: 298 -----------NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
                      N MI + C+ G +D+  +  E MI R   P    +N+L+   C   R+ 
Sbjct: 259 LCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLP 318

Query: 347 RARELFVSMVSKG---CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
               LF  M S     C  ++ +YNI+++  CK +++++A  L  EM +  + P V+TY+
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            L+ GL ++G L  A  L+++M    V PDSFT A+ ++ L K G V  A+   + ++  
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                + TYN L++GLCK GR+  A     ++      PDV + + +I  LC+ GQ   A
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           + +  +M  +  +P  V + +LL G  +N  +   + LL       L   D  +   VVD
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT----SLCKPDFVMHKMVVD 554

Query: 584 LLSKDKKYRE 593
            L K  K  +
Sbjct: 555 GLCKAGKAED 564



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 226/484 (46%), Gaps = 55/484 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F+ M K    P + S++ LL  L K  + D    L++ +      PDL      
Sbjct: 161 SEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSF 220

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTF-----------------NFLINGLCAEG 165
           +  LCK    + A     +++      + V F                 N +I  LC  G
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG 280

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
            + EA + F+++      P+   FNTLI+ +C+++     + LF+ M +     C P++ 
Sbjct: 281 MLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TYN ++D LCK   +D+A+EL+ +M +  ++P+V+TY++L+ G C +     A  L  EM
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
              GV PD  T  +++N   K GK+D     LE M  RG  PD VTYN+L+DG C  GRI
Sbjct: 401 SKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRI 460

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A      MV+  C  DV+SY I+I A C+  +   A  +++EM+   + P  + Y++L
Sbjct: 461 DEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSL 520

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           L GL + G    AL+L+                     LCK  FV+  + V         
Sbjct: 521 LDGLARNGLEDLALELLKT------------------SLCKPDFVMHKMVV--------- 553

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                      +GLCK G+ + AC++  R+   G   D  T   ++  L K G++DKA  
Sbjct: 554 -----------DGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQ 602

Query: 526 LLLD 529
           L+ D
Sbjct: 603 LVDD 606



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 233/473 (49%), Gaps = 26/473 (5%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V+  ++  L K+      F  LGR  +  +  +  T+N  ++ L        A   F+++
Sbjct: 7   VVGEVLRHLGKISTIVRLFDWLGR--QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P+  T++ ++ GLC+      A +L  ++  E G   K +V+TY+ +IDG CK 
Sbjct: 65  QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL-RESGV--KLNVITYSVVIDGCCKA 121

Query: 238 GFVDKAKELLLQMK-DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
             VD A E+   M       P+V+T+NSL+ G C  +   EA  LF  M   G +P+V++
Sbjct: 122 SRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVIS 181

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           ++ +++  CK G++D+  RL E M+++   PD V Y S + G C   R++ A +    MV
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMV 241

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDA-------VC----------LYREMLSERIRPSV 399
           +KG + D  +++ +I   CK    E+A       +C           + EM+S    PS 
Sbjct: 242 TKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSA 301

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV---PDSFTFATYIDGLCKNGFVLEAVQV 456
             +NTL+  + +   L D + L  +M+        P+  T+   +D LCK   + EA ++
Sbjct: 302 ELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQEL 361

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              + N      + TY+ L++GLCK+G+L  AC L   +  +G  PD  T +++++ L K
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK 421

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
            G++D A   L  M+A+   P  VT+ TLL G  +  +  + +  L KM A K
Sbjct: 422 AGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 134/263 (50%), Gaps = 4/263 (1%)

Query: 342 VGRISRARELFVSM-VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
           +G+IS    LF  +   KG +H V++YN  ++A  K    + A   +++M      P   
Sbjct: 15  LGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDF 74

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TY+ +L GL + G L  A +L+ +++ + V  +  T++  IDG CK   V +A+++F+ +
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 461 R-NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
                C   + T+N L+ GLC   R+  A  LF  +   G  P+V++ ST++  LCK G+
Sbjct: 135 SAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +D+A  L  +M  K+CVP  V + + + G  + N+ ++      KM   K   +D    S
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT-KGSKADAVAFS 253

Query: 580 KVVDLLSKDKKYRECLNQ-FRHL 601
            V+ +L K     E  NQ   HL
Sbjct: 254 TVIGILCKKGHAEEAQNQMIEHL 276


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/504 (29%), Positives = 254/504 (50%), Gaps = 18/504 (3%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A  FFD M+    +P + ++ IL+  L         +S+ + +   G  P++   N L+ 
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 233

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
              + G   GA  ++G +      PN VTFN ++NG+C  G++ +A ++F ++      P
Sbjct: 234 AFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAP 293

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + V++NTL+ G C+   +  AL +F EM  +      PDVVT+ S+I  +CK G +++A 
Sbjct: 294 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG---IMPDVVTFTSLIHVMCKAGNLERAV 350

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            L+ QM++R +  N +T+ +LI GFC      +A      M    ++P VV +NA+IN  
Sbjct: 351 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGY 410

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  G+MD+   LL  M  +G+ PD VTY++++  +C       A EL   M+ KG   D 
Sbjct: 411 CMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDA 470

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y+ LI   C ++++ DA  L++ M+   ++P   TY +L+ G  + GN+  AL L DK
Sbjct: 471 ITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDK 530

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV---------------FQAIRNCKCELRI 469
           M    V+PD  T++  I+GL K+   +EA Q+               + A+ +C  +  +
Sbjct: 531 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAEL 590

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
           ++   L+ G C  G +  A K++  +  +    D    S +IH  C+ G + KA      
Sbjct: 591 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 650

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNN 553
           M      P+  +  +L+RG  +N 
Sbjct: 651 MLQGGFAPNSTSTISLIRGLFENG 674



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 218/422 (51%), Gaps = 4/422 (0%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           + P+ + +N ++  L ++  +  A R F  +      PNV T+N L+  LC   +   AL
Sbjct: 152 YVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            +  +M    GA C P+VVTYN+++    + G VD A+ L+  M++  + PN++T+NS++
Sbjct: 211 SILRDM---RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMV 267

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C     ++A+ +F EM+  G+ PD V++N ++   CK G   +   +   M Q+G+ 
Sbjct: 268 NGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 327

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD VT+ SL+   C  G + RA  L   M  +G + +  ++  LI+  CK   ++DA+  
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 387

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            R M   RI+PSV+ YN L++G   VG + +A +L+ +M+   + PD  T++T I   CK
Sbjct: 388 VRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 447

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           N     A ++ Q +          TY+ LI  LC   RL  A  LF  +   G  PD  T
Sbjct: 448 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFT 507

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            +++I   CKEG ++ A  L   M     +P  VT+  L+ G  ++ +  +   LL K+ 
Sbjct: 508 YTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY 567

Query: 567 AE 568
            E
Sbjct: 568 HE 569



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 216/420 (51%), Gaps = 9/420 (2%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V+ +N ++  L     T  A + F+ M+++  A   P+V TYN ++  LC  G   +A
Sbjct: 154 PSVLAYNAVLLALSDASLT-SARRFFDSMLSDGVA---PNVYTYNILVRALCGRGHRKEA 209

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +L  M+     PNV+TYN+L+  F    +   A+ L   M + G++P++VTFN+M+N 
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK GKM+   ++ + M++ G+ PD V+YN+L+ G+C  G    A  +F  M  KG   D
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V ++  LI+  CK   +E AV L R+M    ++ + +T+  L+ G  + G L DAL  + 
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M+   + P    +   I+G C  G + EA ++   +     +  + TY+ +I+  CK  
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
              +A +L  ++  KG +PD +T S++I  LC E ++  A+ L  +M      P E T+ 
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
           +L+ G  +       + L  KM     V+ D+   S +++ LSK  +  E     + LLF
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAG-VLPDVVTYSVLINGLSKSARAMEA----QQLLF 564



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 201/399 (50%), Gaps = 22/399 (5%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG S    +    K+G   S+EA+  F  M +    P + +FT L+ ++ K    +  V+
Sbjct: 294 DGVSYNTLVGGYCKAG--CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVT 351

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC-FTPNTVTFNFLINGL 161
           L +++   GL  +      LI+  CK G    A + + R ++ C   P+ V +N LING 
Sbjct: 352 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV-RGMKQCRIKPSVVCYNALINGY 410

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  GR+ EA  L  ++      P+VVT++T+I+  C+  +T  A +L ++M+ E G +  
Sbjct: 411 CMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML-EKGVL-- 467

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD +TY+S+I  LC +  +  A  L   M    + P+  TY SLI G C   + + A  L
Sbjct: 468 PDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSL 527

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD---- 337
             +M+  GV PDVVT++ +IN   K  +  +  +LL  +      P    Y++LM     
Sbjct: 528 HDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRK 587

Query: 338 -----------GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
                      GFC+ G ++ A +++ SM+ +    D   Y++LI+ +C+   V  A+  
Sbjct: 588 AELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSF 647

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +++ML     P+  +  +L+ GLF+ G + +A ++I ++
Sbjct: 648 HKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 686


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 237/446 (53%), Gaps = 14/446 (3%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           +++G   +G + E   L   +      PN   FN   +   +      A+ +F +M  + 
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKM-RQH 59

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
           G    PD V+Y ++ID LCK G VD A+    QM +  + PN++ ++SL+ G C +D W+
Sbjct: 60  G--LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWE 117

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           + + LF EM++ G+ P++V FN ++   CK+G++ +  RL++ +   GV PD ++YN+L+
Sbjct: 118 KVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLI 177

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           DG CL G I  A +L   MVS G + + +SYN L++  CK  +++ A  L+R+MLS  I 
Sbjct: 178 DGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGIT 237

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P V+TYNT+L GLFQ     +A +L   M  +      +T+ T ++GLCK+  V EA ++
Sbjct: 238 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKM 297

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           FQ++ +   +L I T+  +I  L K GR + A  LF  +   G +PDVVT   +   L +
Sbjct: 298 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIE 357

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           EG +++ + L   ME     P+      L+R  +     S+    L K+      V + S
Sbjct: 358 EGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSV-EAS 416

Query: 577 LSSKVVDLLSKD----------KKYR 592
            +S ++ + S D          KKYR
Sbjct: 417 TTSMLISIFSSDEYQHHAKSLPKKYR 442



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 213/418 (50%), Gaps = 3/418 (0%)

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
           +NG+ P+  + N+  +   K G+   A  +  ++ +   +P+ V++  LI+ LC  GR+ 
Sbjct: 23  ANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVD 82

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A   F ++      PN+V F++L+ GLC         +LF EM+N       P++V +N
Sbjct: 83  DAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLN---VGIHPNIVFFN 139

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           +I+  LCK+G V + + L+  ++   + P+VI+YN+LI G C      EA  L   M+  
Sbjct: 140 TILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSV 199

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G++P+  ++N +++  CK G++D    L   M+  G+ P  VTYN+++ G     R S A
Sbjct: 200 GLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 259

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           +EL+++M++ G +  +Y+YN ++N  CK   V++A  +++ + S+ ++ ++IT+  ++  
Sbjct: 260 KELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 319

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G   DA+ L   +  N +VPD  T+    + L + G + E   +F A+        
Sbjct: 320 LLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPN 379

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
            +  N L+  L   G +  A     +L  +    +  T S +I     +     A  L
Sbjct: 380 SQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 437



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 206/424 (48%), Gaps = 4/424 (0%)

Query: 55  HKSGNITS-NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
           H  GN  + +E     + M+    SP    F I  +  AK    D  + +F ++  +GL 
Sbjct: 3   HGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS 62

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD      LI+ LCK+G    A V   +++    TPN V F+ L+ GLC+  +  +   L
Sbjct: 63  PDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEEL 122

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           F ++      PN+V FNT++  LC+    +   +L +  +   G   +PDV++YN++IDG
Sbjct: 123 FFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDS-IECMG--VRPDVISYNTLIDG 179

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            C  G +D+A +LL  M    + PN  +YN+L+ G+C       A  LF +M+ NG+ P 
Sbjct: 180 HCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPG 239

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VVT+N +++   +  +  +   L   MI  G      TYN++++G C    +  A ++F 
Sbjct: 240 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQ 299

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
           S+ SKG + ++ ++ I+I A  K  + EDA+ L+  + +  + P V+TY  +   L + G
Sbjct: 300 SLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEG 359

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           +L +   L   M+ N   P+S      +  L   G +  A      +      +   T +
Sbjct: 360 SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTS 419

Query: 474 CLIN 477
            LI+
Sbjct: 420 MLIS 423



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 158/322 (49%), Gaps = 4/322 (1%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF+ M+ +   P +  F  +L  L K  +      L   +   G+ PD+   N LI+  C
Sbjct: 123 FFE-MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHC 181

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
             G    A  +L  ++     PN+ ++N L++G C  GRI  A  LF+K+      P VV
Sbjct: 182 LAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVV 241

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+NT+++GL +T+    A +L+  M+N   +  K  + TYN+I++GLCK   VD+A ++ 
Sbjct: 242 TYNTILHGLFQTKRFSEAKELYLNMIN---SGTKWGIYTYNTILNGLCKSNCVDEAFKMF 298

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             +  + +  N+IT+  +I         ++A  LF  +  NG+ PDVVT+  +     ++
Sbjct: 299 QSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEE 358

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +++ + L   M + G  P++   N+L+      G ISRA      +  +    +  + 
Sbjct: 359 GSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTT 418

Query: 368 NILINANCKDQKVEDAVCLYRE 389
           ++LI+    D+    A  L ++
Sbjct: 419 SMLISIFSSDEYQHHAKSLPKK 440



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 13/230 (5%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G I S  A   F  M+    +PG+ ++  +L  L + K++     L+  + ++G    
Sbjct: 217 KAGRIDS--AYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWG 274

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N ++N LCK      AF +   +       N +TF  +I  L   GR  +A  LF 
Sbjct: 275 IYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 334

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK----PDVVTYNSII 231
            +      P+VVT+  +   L    +        EE  + F A+ K    P+    N+++
Sbjct: 335 AIPANGLVPDVVTYRVVAENLIEEGS-------LEEFDSLFSAMEKNGTAPNSQMLNALV 387

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
             L   G + +A   L ++ +RN +    T + LI  F   +    AK L
Sbjct: 388 RRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 437


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 161/532 (30%), Positives = 261/532 (49%), Gaps = 51/532 (9%)

Query: 63  NEAVYFFDCMIKMKPS--PGMTSFTILLTMLAKNKQY------DTVVSLFKRLNSNGLFP 114
           ++A++  D M++ K    P   +  I+ + L+K  +       + +V L  +   + +FP
Sbjct: 209 DDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFP 268

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILR--------SC-------------------- 146
           +   L  LI+ LC+ G T  A+ VL  +++        SC                    
Sbjct: 269 NSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLL 328

Query: 147 -------FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV-----FACDPNVVTFNTLIN 194
                    PN VTF  LIN LC   R+ EA  +F+K+N      F  +P+V+T+NTLI+
Sbjct: 329 AEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID 388

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           GLC+       L L E M ++    C P+ VTYN +IDG CK   ++ A+EL  QM    
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQ--PRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDG 446

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PNV+T N+L+ G C       A   F EM   G++ + VT+ A+I   C    ++K  
Sbjct: 447 VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAM 506

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L + M++ G +PD + Y +L+ G    G++ RA  +   M   G   D+ S+N+LIN  
Sbjct: 507 ELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGF 566

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C+  K+++A  + +EM +  I+P  +TYNTL+S   + G+   A +L+ KM    +VP  
Sbjct: 567 CRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTV 626

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRN-CKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            T+   I   C NG + EA+++F+ + +  K       YN LIN LC+  ++  A  L  
Sbjct: 627 VTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMD 686

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
            ++ KG  P+  T + M   L ++  + KA +L+  M    C P  +T   L
Sbjct: 687 DMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/422 (32%), Positives = 220/422 (52%), Gaps = 14/422 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLN---SNGLF--PDLFVLNLLINCL 126
           M +M   P + +F IL+  L K ++ D  + +F+++N   SNG    PD+   N LI+ L
Sbjct: 331 MKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGL 390

Query: 127 CKMGITSGAFVVLGRILRS---CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           CK+G       ++ R +RS   C  PNTVT+N LI+G C    I  A  LF ++N     
Sbjct: 391 CKVGRQEEGLGLVER-MRSQPRCM-PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVP 448

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNVVT NTL++G+C+      A++ F EM    G   K + VTY ++I   C    ++KA
Sbjct: 449 PNVVTLNTLVDGMCKHGRINGAVEFFNEMQ---GKGLKGNAVTYTALIRAFCNVNNIEKA 505

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            EL  +M +   +P+ I Y +LI G         A  +  +M + G  PD+V+FN +IN 
Sbjct: 506 MELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLING 565

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+  K+D+   +L+ M   G+ PD VTYN+L+  F   G  S A  L   MV +G    
Sbjct: 566 FCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPT 625

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           V +Y  LI+A C +  +++A+ ++R+M S  ++ P+ + YN L++ L +   +  AL L+
Sbjct: 626 VVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLM 685

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D M++  V P++ TF     GL +  ++ +A ++   +    C     T   L   L  +
Sbjct: 686 DDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAV 745

Query: 483 GR 484
           G 
Sbjct: 746 GE 747



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 230/465 (49%), Gaps = 19/465 (4%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRIL--RSCFTPNTVTFNFLINGLCAE---GRIMEAAR 172
           + N+LI+ L + G    A  +L  +L  ++ F PN+ T + + + L      GR ++   
Sbjct: 194 IRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEE 253

Query: 173 LFKKLNVFACD---PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           +   ++ FA     PN +    LI+ LCR+  T  A  +   ++   G +   +  + N+
Sbjct: 254 IVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVM---EAASCNA 310

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ++  L +     +   LL +MK+ +I PNV+T+  LI   C      EA  +F E M+ G
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVF-EKMNGG 369

Query: 290 ------VQPDVVTFNAMINYNCKDGKMDKVNRLLELM-IQRGVNPDTVTYNSLMDGFCLV 342
                 V+PDV+T+N +I+  CK G+ ++   L+E M  Q    P+TVTYN L+DG+C  
Sbjct: 370 ESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKA 429

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             I  ARELF  M   G   +V + N L++  CK  ++  AV  + EM  + ++ + +TY
Sbjct: 430 SMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTY 489

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
             L+     V N+  A++L D+M      PD+  + T I GL + G +  A  V   ++ 
Sbjct: 490 TALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKE 549

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 I ++N LING C+  +L  A ++   +++ G  PD VT +T+I    K G    
Sbjct: 550 AGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFST 609

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           A+ L+  M  +  VP+ VT+  L+  +  N    + + +   M++
Sbjct: 610 AHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSS 654



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 161/592 (27%), Positives = 266/592 (44%), Gaps = 89/592 (15%)

Query: 61  TSNEAVYFFDCMIKMKP---SPGMTSFTILLTMLAKNKQ---YDTVVSLFKRLNSNGLFP 114
           ++ +A+ FF+ +    P   SP + SFT+       +++   ++ ++ LFK   S+ +  
Sbjct: 99  STAKALKFFNWVQANSPCQDSP-LLSFTLEAVFEHASREPNSHNKLLDLFKTSKSHKIPL 157

Query: 115 DLFVLNLLINCLCKMGITSGAFVVL-----------------------GRI--------- 142
            +    LLI C  +  +   +F+V                        GR+         
Sbjct: 158 SVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDE 217

Query: 143 ---LRSCFTPNTVTFNFLINGLCAE---GRIMEAARLFKKLNVFACD---PNVVTFNTLI 193
               ++ F PN+ T + + + L      GR ++   +   ++ FA     PN +    LI
Sbjct: 218 MLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLI 277

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAI--------------------------------CK 221
           + LCR+  T  A  +   ++   G +                                 +
Sbjct: 278 SRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQ 337

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN-----PNVITYNSLICGFCCVDDWK 276
           P+VVT+  +I+ LCK   VD+A E+  +M     N     P+VITYN+LI G C V   +
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQE 397

Query: 277 EAKCLFIEMMDNGVQ--PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           E   L +E M +  +  P+ VT+N +I+  CK   ++    L + M + GV P+ VT N+
Sbjct: 398 EGLGL-VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L+DG C  GRI+ A E F  M  KG + +  +Y  LI A C    +E A+ L+ EML   
Sbjct: 457 LVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAG 516

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
             P  I Y TL+SGL Q G L  A  ++ KM+     PD  +F   I+G C+   + EA 
Sbjct: 517 CSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAY 576

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           ++ + + N   +    TYN LI+   K G   TA +L  ++  +G +P VVT   +IH  
Sbjct: 577 EMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAY 636

Query: 515 CKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           C  G +D+A  +  DM + + V P+ V +  L+    + N+    + L+  M
Sbjct: 637 CLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDM 688



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 6/295 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  N AV FF+ M          ++T L+         +  + LF  +   G  PD
Sbjct: 463 KHGRI--NGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPD 520

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             V   LI+ L + G    A  VL ++  + F+P+ V+FN LING C + ++ EA  + K
Sbjct: 521 AIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLK 580

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P+ VT+NTLI+   +T +   A +L ++MV E G +  P VVTY ++I   C
Sbjct: 581 EMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKE-GLV--PTVVTYGALIHAYC 637

Query: 236 KDGFVDKAKELLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
            +G +D+A ++   M   + + PN + YN LI   C  +    A  L  +M   GV+P+ 
Sbjct: 638 LNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNT 697

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
            TFNAM     +   + K   L++ M +   NPD +T   L +    VG  ++ +
Sbjct: 698 NTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLK 752


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 168/573 (29%), Positives = 273/573 (47%), Gaps = 68/573 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   F+ M K    P   + + L+    +    D V+ +   + S G+  +L   N+L
Sbjct: 315 NEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVL 374

Query: 123 INCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I+ LCK G +   A ++ G +   C  PN+ TF  LI G C E  +  A  L  ++    
Sbjct: 375 IHGLCKFGKMEKAAEILKGMVTLGC-KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 433

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEM------------------------VNEF- 216
             P+ V++  +INGLC  ++  +A KL E+M                        + E  
Sbjct: 434 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEAR 493

Query: 217 ----GAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
               G  C    PD+  YN+II  L K G +++A   LL+++ R + P+ +T+ + I G+
Sbjct: 494 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 553

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
                  EA   F EM+D+G+ P+   +  +IN + K G + +   +   +   GV PD 
Sbjct: 554 SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDV 613

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            T ++ + G    GR+  A ++F  +  KG   DV++Y+ LI+  CK  +VE A  L+ E
Sbjct: 614 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 673

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M  + I P++  YN L+ GL + G++  A KL D M    + PDS T++T IDG CK+  
Sbjct: 674 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 733

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG---------- 499
           V EA  +F  + +   +     YN L++G CK G ++ A  LF  +  KG          
Sbjct: 734 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTL 793

Query: 500 ------------------------PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
                                    +PD VT +T+I W CK G+M++AN L  +M+ +N 
Sbjct: 794 IDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 853

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +   VT+ +L+ G+ +  + S+V  L  KM A+
Sbjct: 854 IVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 886



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 169/575 (29%), Positives = 284/575 (49%), Gaps = 42/575 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV     M +    P   ++TI+   L + K+ +     F+ +   GL PD    + L
Sbjct: 280 DEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSAL 339

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTP-NTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I+   + G      + +  ++ SC  P N +T+N LI+GLC  G++ +AA + K +    
Sbjct: 340 IDGFMREGDID-EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C PN  TF  LI G CR  N   AL+L +EM         P  V+Y ++I+GLC    + 
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN---LVPSAVSYGAMINGLCHCKDLS 455

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A +LL +M    + PNV+ Y+ LI  +      +EA+ L   M  +GV PD+  +NA+I
Sbjct: 456 LANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 515

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K GKM++ +  L  +  RG+ PD VT+ + + G+   G+++ A + F  M+  G  
Sbjct: 516 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 575

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +   Y +LIN + K   + +A+ ++R + +  + P V T +  + GL + G + +ALK+
Sbjct: 576 PNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 635

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
             +++   +VPD FT+++ I G CK G V +A ++   +        I  YN L++GLCK
Sbjct: 636 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 695

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMI------------------------------ 511
            G ++ A KLF  +  KG  PD VT STMI                              
Sbjct: 696 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 755

Query: 512 -----HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
                H  CKEG M+KA +L  +M  K    + ++F TL+ G+ ++ K  +   L  +M 
Sbjct: 756 YNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMI 814

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           A++++   ++ ++ V+D   K  K  E    F+ +
Sbjct: 815 AKQIMPDHVTYTT-VIDWHCKAGKMEEANLLFKEM 848



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 256/488 (52%), Gaps = 4/488 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  ++IL+   A   + +    L   ++ +G+ PD+F  N +I+CL K G    A   
Sbjct: 471 PNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 530

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  I      P+ VTF   I G    G++ EAA+ F ++      PN   +  LING  +
Sbjct: 531 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 590

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             N + AL +F  + +  G +  PDV T ++ I GL K+G V +A ++  ++K++ + P+
Sbjct: 591 AGNLMEALSIFRRL-HALGVL--PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TY+SLI GFC   + ++A  L  EM   G+ P++  +NA+++  CK G + +  +L +
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M ++G+ PD+VTY++++DG+C    ++ A  LF  M SKG +   + YN L++  CK+ 
Sbjct: 708 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 767

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +E A+ L+REML +    + +++NTL+ G  +   + +A +L  +M    ++PD  T+ 
Sbjct: 768 DMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 826

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T ID  CK G + EA  +F+ ++     +   TY  L+ G  K+G+      LF ++  K
Sbjct: 827 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 886

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PD VT   +I+  CKE  + +A  L  ++  K  +        L+    +    ++ 
Sbjct: 887 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 946

Query: 559 VVLLHKMA 566
             LL +M 
Sbjct: 947 SKLLDEMG 954



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 241/470 (51%), Gaps = 4/470 (0%)

Query: 79   PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
            P   +F   +   +K  +       F  +  +GL P+  +  +LIN   K G    A  +
Sbjct: 541  PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSI 600

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              R+      P+  T +  I+GL   GR+ EA ++F +L      P+V T+++LI+G C+
Sbjct: 601  FRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 660

Query: 199  TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                  A +L +EM  +  A   P++  YN+++DGLCK G + +A++L   M ++ + P+
Sbjct: 661  QGEVEKAFELHDEMCLKGIA---PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 717

Query: 259  VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             +TY+++I G+C  ++  EA  LF EM   GVQP    +NA+++  CK+G M+K   L  
Sbjct: 718  SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 777

Query: 319  LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
             M+Q+G    T+++N+L+DG+C   +I  A +LF  M++K    D  +Y  +I+ +CK  
Sbjct: 778  EMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 836

Query: 379  KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            K+E+A  L++EM    +    +TY +L+ G  ++G   +   L +KM    V PD  T+ 
Sbjct: 837  KMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYG 896

Query: 439  TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
              I   CK   ++EA ++   +       +   ++ LI  LCK   L  A KL   +   
Sbjct: 897  LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 956

Query: 499  GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            G  P +  C+T++    + G+MD+A  +   +++   VP   T   L+ G
Sbjct: 957  GLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 275/569 (48%), Gaps = 39/569 (6%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           ++ M+  K    + ++T L+  L K         +   ++  GL P+ F+ +L+I  +C+
Sbjct: 216 YNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQ 275

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP---- 184
           +G    A  +   +      PNT T+  +  GLC   R+ EA   F+++      P    
Sbjct: 276 VGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNA 335

Query: 185 -------------------------------NVVTFNTLINGLCRTRNTLVALKLFEEMV 213
                                          N++T+N LI+GLC+      A ++ + MV
Sbjct: 336 CSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMV 395

Query: 214 NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
              G  CKP+  T+  +I+G C++  + +A ELL +M+ RN+ P+ ++Y ++I G C   
Sbjct: 396 T-LG--CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 452

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           D   A  L  +M  +G++P+VV ++ +I     +G++++  RLL+ M   GV PD   YN
Sbjct: 453 DLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYN 512

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +++      G++  A    + +  +G + D  ++   I    K  K+ +A   + EML  
Sbjct: 513 AIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH 572

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            + P+   Y  L++G F+ GNL +AL +  ++    V+PD  T + +I GL KNG V EA
Sbjct: 573 GLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEA 632

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           ++VF  ++       + TY+ LI+G CK G ++ A +L   +  KG  P++   + ++  
Sbjct: 633 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 692

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           LCK G + +A  L   M  K   P  VT+ T++ G+ ++   ++   L H+M + K V  
Sbjct: 693 LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS-KGVQP 751

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
              + + +V    K+    + +N FR +L
Sbjct: 752 HSFVYNALVHGCCKEGDMEKAMNLFREML 780



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 226/429 (52%), Gaps = 6/429 (1%)

Query: 50   FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
             +N   K+GN+   EA+  F  +  +   P + + +  +  L KN +    + +F  L  
Sbjct: 584  LINGHFKAGNLM--EALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 641

Query: 110  NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
             GL PD+F  + LI+  CK G    AF +   +      PN   +N L++GLC  G I  
Sbjct: 642  KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 701

Query: 170  AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
            A +LF  +     +P+ VT++T+I+G C++ N   A  LF EM ++     +P    YN+
Sbjct: 702  ARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG---VQPHSFVYNA 758

Query: 230  IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
            ++ G CK+G ++KA  L  +M  +      +++N+LI G+C     +EA  LF EM+   
Sbjct: 759  LVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 817

Query: 290  VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
            + PD VT+  +I+++CK GKM++ N L + M +R +  DTVTY SLM G+  +G+ S   
Sbjct: 818  IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 877

Query: 350  ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
             LF  MV+KG + D  +Y ++I A+CK+  + +A  L  E++ + +      ++ L++ L
Sbjct: 878  ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 937

Query: 410  FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
             +  +L +A KL+D+M    + P      T +    + G + EA +VF+ +++       
Sbjct: 938  CKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 997

Query: 470  ETYNCLING 478
             T   L+NG
Sbjct: 998  TTLIDLVNG 1006



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 246/539 (45%), Gaps = 39/539 (7%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F IL+    +    D   ++F    ++ +   L   N L+  L K G+    + V   +L
Sbjct: 161 FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGML 220

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
            +    +  T+ +L+  LC  G +  A R+  +++    +PN   ++ +I G+C+  +  
Sbjct: 221 DAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDID 280

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP------ 257
            A++L   M  E G +  P+  TY  I  GLC+   +++AK    +M+   + P      
Sbjct: 281 EAVELKRSM-GEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACS 337

Query: 258 -----------------------------NVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
                                        N+ITYN LI G C     ++A  +   M+  
Sbjct: 338 ALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTL 397

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G +P+  TF  +I   C++  M +   LL+ M +R + P  V+Y ++++G C    +S A
Sbjct: 398 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLA 457

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            +L   M   G + +V  Y+ILI A   + ++E+A  L   M    + P +  YN ++S 
Sbjct: 458 NKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC 517

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G + +A   + ++Q   + PD+ TF  +I G  K G + EA + F  + +      
Sbjct: 518 LSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPN 577

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
              Y  LING  K G L  A  +F RL   G +PDV TCS  IH L K G++ +A  +  
Sbjct: 578 NPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS 637

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           +++ K  VP   T+ +L+ GF +  +  K    LH     K +  ++ + + +VD L K
Sbjct: 638 ELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE-LHDEMCLKGIAPNIFIYNALVDGLCK 695



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 198/432 (45%), Gaps = 68/432 (15%)

Query: 43   DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
            D  + + F++   K+G +   EA+  F  + +    P + +++ L++   K  + +    
Sbjct: 612  DVQTCSAFIHGLLKNGRV--QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 669

Query: 103  LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            L   +   G+ P++F+ N L++ LCK G    A  +   +      P++VT++ +I+G C
Sbjct: 670  LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 729

Query: 163  AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------- 215
                + EA  LF ++      P+   +N L++G C+  +   A+ LF EM+ +       
Sbjct: 730  KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS 789

Query: 216  ----FGAICK--------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
                    CK                    PD VTY ++ID  CK G +++A  L  +M+
Sbjct: 790  FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 849

Query: 252  DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            +RN+  + +TY SL+ G+  +    E   LF +M+  GV+PD VT+  +I  +CK+  + 
Sbjct: 850  ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 909

Query: 312  KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
            +  +L + ++ +G                              M++KG  HD     +LI
Sbjct: 910  EAFKLRDEVVGKG------------------------------MLTKGTIHD-----LLI 934

Query: 372  NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
             A CK + + +A  L  EM    ++PS+   NTL+    + G + +A ++ + ++   +V
Sbjct: 935  TALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLV 994

Query: 432  PDSFTFATYIDG 443
            PD+ T    ++G
Sbjct: 995  PDTTTLIDLVNG 1006



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 209/455 (45%), Gaps = 49/455 (10%)

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD-----VVTYNSIIDGLCKDGFVD 241
           V F+ LI+   R       + + +E  N F  + K D     ++  NS++  L K G ++
Sbjct: 159 VVFDILIDSYKR-------MGMLDEAANVF-FVAKNDSILISLIRCNSLLKDLLKCGMME 210

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
              ++   M D  +  +V TY  L+   C   D + AK + IEM + G+ P+   ++ +I
Sbjct: 211 LFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVI 270

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C+ G +D+   L   M ++G+ P+T TY  +  G C   R++ A+  F  M   G +
Sbjct: 271 EGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLK 330

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG-------- 413
            D  + + LI+   ++  +++ + +   M+S  I  ++ITYN L+ GL + G        
Sbjct: 331 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEI 390

Query: 414 ---------------------------NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
                                      N+G AL+L+D+M+  ++VP + ++   I+GLC 
Sbjct: 391 LKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 450

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
              +  A ++ + +     +  +  Y+ LI      GR++ A +L   +   G  PD+  
Sbjct: 451 CKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFC 510

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            + +I  L K G+M++A+  LL+++ +   P  VTF   + G+ +  K ++      +M 
Sbjct: 511 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              L+ ++  L + +++   K     E L+ FR L
Sbjct: 571 DHGLMPNN-PLYTVLINGHFKAGNLMEALSIFRRL 604



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 162/336 (48%), Gaps = 6/336 (1%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            KSG+I    A   FD M +    P   +++ ++    K++      SLF  + S G+ P 
Sbjct: 695  KSGDI--QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 752

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             FV N L++  CK G    A  +   +L+  F   T++FN LI+G C   +I EA++LF+
Sbjct: 753  SFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQ 811

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            ++      P+ VT+ T+I+  C+      A  LF+EM  E   I   D VTY S++ G  
Sbjct: 812  EMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM-QERNLIV--DTVTYTSLMYGYN 868

Query: 236  KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            K G   +   L  +M  + + P+ +TY  +I   C  D+  EA  L  E++  G+     
Sbjct: 869  KLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGT 928

Query: 296  TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
              + +I   CK   + + ++LL+ M + G+ P     N+L+  F   G++  A  +F  +
Sbjct: 929  IHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGV 988

Query: 356  VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
             S G   D  +   L+N N  D   EDA  L ++++
Sbjct: 989  KSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 88/198 (44%), Gaps = 1/198 (0%)

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           S + ++ L+    ++G L +A  +    + + ++       + +  L K G +    +V+
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVY 216

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             + + K    + TY  L+  LCK G L+ A ++   +  KG  P+    S +I  +C+ 
Sbjct: 217 NGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV 276

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G +D+A +L   M  K  VP+  T+  +  G  +  + ++  +   +M    L   D + 
Sbjct: 277 GDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGL-KPDYNA 335

Query: 578 SSKVVDLLSKDKKYRECL 595
            S ++D   ++    E L
Sbjct: 336 CSALIDGFMREGDIDEVL 353


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 225/418 (53%), Gaps = 4/418 (0%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           +P+++T++ LING C      +A RL  ++      P+   +NT+I GLC       AL 
Sbjct: 30  SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
            + +M       C P V+TY  ++D LCK   +  A  +L  M +    PNV+TYN+LI 
Sbjct: 90  HYRDMQRH----CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLIN 145

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GFC + +  EA  LF +M++N   PDV T+N +I+  CK  +     +LL+ M++ G  P
Sbjct: 146 GFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEP 205

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + +TYN+LMD     G+   A  L   M+ + C+   +++N++I+  CK  +++ A  L+
Sbjct: 206 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF 265

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           + M      P + TYN ++SG  +   + DA +L+++M      PD  T+ + + GLCK 
Sbjct: 266 QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 325

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             V EA +V++ +RN    L + T + LI+GLCK  RL  A KL   ++  G  PDVV  
Sbjct: 326 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 385

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           + +IH  CK  Q+DK+     +M  K CVP+ +T+  ++    ++ +     +LL  M
Sbjct: 386 TILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 443



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 232/434 (53%), Gaps = 4/434 (0%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           LL+   + K+      LFK        PD    + LIN  CK      A+ +L  + +  
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+   +N +I GLC  GR+  A   ++ +    C P+V+T+  L++ LC++     A 
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDAS 122

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            + E+M+    A C P+VVTYN++I+G CK G +D+A  L  QM + + +P+V TYN LI
Sbjct: 123 LILEDMIE---AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G+C  +  ++   L  EM+  G +P+ +T+N +++   K GK      L ++M++R   
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P   T+N ++D FC VG++  A ELF  M  +GC  D+Y+YNI+I+  C+  +++DA  L
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
              M      P V+TYN+++SGL +   + +A ++ + ++      D  T +T IDGLCK
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 359

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           +  + +A ++ + +        +  Y  LI+G CK  +L  +   F  +  KG +P V+T
Sbjct: 360 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 419

Query: 507 CSTMIHWLCKEGQM 520
            S +I  LCK  ++
Sbjct: 420 YSIVIDKLCKSARV 433



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 147/441 (33%), Positives = 231/441 (52%), Gaps = 9/441 (2%)

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N L++    + +  EA  LFK      C P+ +T++TLING C+ R+   A +L +EM  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM-E 60

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD--RNINPNVITYNSLICGFCCV 272
           + G +  P    YN+II GLC +G VD A   L+  +D  R+  P+VITY  L+   C  
Sbjct: 61  KRGIV--PHNAVYNTIIKGLCDNGRVDSA---LVHYRDMQRHCAPSVITYTILVDALCKS 115

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
               +A  +  +M++ G  P+VVT+N +IN  CK G MD+   L   M++   +PD  TY
Sbjct: 116 ARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTY 175

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N L+DG+C   R     +L   MV  GC  +  +YN L+++  K  K  DA  L + ML 
Sbjct: 176 NILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLR 235

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
              +PS  T+N ++    +VG L  A +L   M     +PD +T+   I G C+   + +
Sbjct: 236 RDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDD 295

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A Q+ + +    C   + TYN +++GLCK  ++  A +++  L++ G   DVVTCST+I 
Sbjct: 296 ARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLID 355

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            LCK  ++D A  LL +ME     P  V +  L+ GF + ++  K +    +M  +K  V
Sbjct: 356 GLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM-LDKGCV 414

Query: 573 SDLSLSSKVVDLLSKDKKYRE 593
             +   S V+D L K  + R+
Sbjct: 415 PTVITYSIVIDKLCKSARVRD 435



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/422 (32%), Positives = 211/422 (50%), Gaps = 4/422 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP   +++ L+    K + +     L   +   G+ P   V N +I  LC  G    A V
Sbjct: 30  SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
               + R C  P+ +T+  L++ LC   RI +A+ + + +    C PNVVT+NTLING C
Sbjct: 90  HYRDMQRHC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  N   A+ LF +M+      C PDV TYN +IDG CK        +LL +M      P
Sbjct: 149 KLGNMDEAVVLFNQMLENS---CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEP 205

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N ITYN+L+        + +A  L   M+    +P   TFN MI+  CK G++D    L 
Sbjct: 206 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF 265

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           +LM  RG  PD  TYN ++ G C   RI  AR+L   M   GC  DV +YN +++  CK 
Sbjct: 266 QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 325

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +V++A  +Y  + +      V+T +TL+ GL +   L DA KL+ +M+ N   PD   +
Sbjct: 326 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 385

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I G CK   + +++  F  + +  C   + TY+ +I+ LCK  R++  C L   +  
Sbjct: 386 TILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE 445

Query: 498 KG 499
           +G
Sbjct: 446 RG 447



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 177/350 (50%), Gaps = 32/350 (9%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + ++TIL+  L K+ +      + + +   G  P++   N LIN  CK+G    A V
Sbjct: 99  APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVV 158

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  ++L +  +P+  T+N LI+G C + R  + A+L +++  + C+PN +T+NTL++ L 
Sbjct: 159 LFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLV 218

Query: 198 RTRNTLVALKL---------------FEEMVNEFGAI-----------------CKPDVV 225
           ++   + A  L               F  M++ F  +                 C PD+ 
Sbjct: 219 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIY 278

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TYN +I G C+   +D A++LL +M +    P+V+TYNS++ G C      EA  ++  +
Sbjct: 279 TYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL 338

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
            + G   DVVT + +I+  CK  ++D   +LL  M + G  PD V Y  L+ GFC   ++
Sbjct: 339 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL 398

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
            ++   F  M+ KGC   V +Y+I+I+  CK  +V D   L + ML   +
Sbjct: 399 DKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 166/491 (33%), Positives = 252/491 (51%), Gaps = 7/491 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K    P    +  L+  L++  Q    + L + +   G  PD+   N +I+ LCK+  
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  ++ R+L   F P+ +T+ FL++GLC  G++ EA ++  K+    C PN    NT
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI---PC-PNNAILNT 359

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LING   +     A     E +  FG   +PD+ TYN ++ GLCK+G +  A++L+ +M 
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGF--QPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R   PNVITY  L+ G C     +EA  +  EM   G+  + V +N +I   C+  K+ 
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               LL  M  +G  PD  TYNSL+ G C V RI  A  LF +M+  G   +  +YN LI
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +A  +    + A+ L  +ML        ITYN L+    +VGN+   L+L ++M ++ + 
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            D+ +    I+GLCK G V  A +  +   N      I TYN ++NGLCK+GR+K A  L
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNL 657

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV- 550
           F RLQ +G  PD  T +T I W CKEG ++ A            VPS +T+  L+   + 
Sbjct: 658 FDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLK 717

Query: 551 QNNKKSKVVVL 561
           Q+N+++   VL
Sbjct: 718 QSNQENNFFVL 728



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 257/493 (52%), Gaps = 10/493 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   S+ ++L +L          ++F  + S G+ P +F   +++  LC       A  
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACS 239

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  + +    PN++ +  LI+ L  + ++ EA +L +++ V  C P+V TFN +I+GLC
Sbjct: 240 LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 299

Query: 198 RTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           +      A KL + M+   F     PD +TY  ++ GLC+ G +++A+++L+++      
Sbjct: 300 KVNKIHDATKLVDRMLLRGF----YPDNMTYGFLLHGLCRIGKLNEARKILIKIP----C 351

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNR 315
           PN    N+LI G+      KEA+    E M N G QPD+ T+N +++  CK+G +     
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L+  M +RG  P+ +TY  L++G C  G +  A  +   M ++G   +   YN LI A C
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           + +KV  A+ L  EM ++  +P + TYN+L+ GL +V  + +A +L   M L+  V ++ 
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+ T I  L + G   +A+ +   +    C L   TYN LI   CK+G ++   +L+ ++
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G   D ++C+ MI+ LCK G++D A + L D   +  VP  VT+ ++L G  +  + 
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 556 SKVVVLLHKMAAE 568
            + + L  ++  E
Sbjct: 652 KEALNLFDRLQVE 664



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 202/409 (49%), Gaps = 4/409 (0%)

Query: 17  GYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           G+  +  C  G+    +  L      +   +   +N    SG +   ++ +  + MI   
Sbjct: 327 GFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQS-FLNETMINFG 385

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
             P + ++ IL+  L K         L   ++  G  P++    +L+N LCK G+   A 
Sbjct: 386 FQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAG 445

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
           +VL  +     T N+V +N LI  LC + ++  A  L  ++    C P++ T+N+LI GL
Sbjct: 446 LVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGL 505

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+      A +LF  M+ + GA+   + VTYN++I  L + G   KA  L+  M  R   
Sbjct: 506 CKVDRIDEAFRLFHNMLLD-GAVA--NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCT 562

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
            + ITYN LI  FC V + ++   L+ +M+ +G+  D ++ N MIN  CK GK+D     
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L   I RG  PD VTYNS+++G C VGRI  A  LF  +  +G R D ++YN  I+  CK
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +  V DA   +   +     PS +T+N L+  L +  N  +   ++D++
Sbjct: 683 EGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 147/546 (26%), Positives = 252/546 (46%), Gaps = 46/546 (8%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF-VLNLLINCLC 127
           FD + K++ S  + +   L  +L       T++ +F+R+     +   F V  + IN   
Sbjct: 65  FD-LTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFIN--- 120

Query: 128 KMGITSGAFVVLGRILRSCFTPNTV----TFNFLINGLCAEGRIMEAARLFKKLN-VFAC 182
           K+G   G F ++ ++L        V     F  ++      G+  +A RL   +  V+ C
Sbjct: 121 KLGAI-GKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLC 179

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P   +++ ++  L       VA  +F +M+++      P V T+  ++  LC    VD 
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKG---VSPTVFTFGIVMKALCMFNEVDS 236

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL  M      PN I Y +LI      +   EA  L  EM   G  PDV TFN +I+
Sbjct: 237 ACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIH 296

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV--------- 353
             CK  K+    +L++ M+ RG  PD +TY  L+ G C +G+++ AR++ +         
Sbjct: 297 GLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAI 356

Query: 354 -----------------------SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
                                  +M++ G + D+++YNIL++  CK+  +  A  L  EM
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
                 P+VITY  L++GL + G L +A  ++ +M    +  +S  +   I  LC+   V
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             A+ +   +    C+  + TYN LI GLCK+ R+  A +LFH +   G + + VT +T+
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           IH L + G   KA  L+ DM  + C   ++T+  L++ F +     K + L  +M  + L
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596

Query: 571 VVSDLS 576
               +S
Sbjct: 597 GADTIS 602



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 190/386 (49%), Gaps = 6/386 (1%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           +C+P   +Y+ +++ L        A  +   M  + ++P V T+  ++   C  ++   A
Sbjct: 178 LCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSA 237

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             L  +M  +G  P+ + +  +I+   +  ++ +  +LLE M   G  PD  T+N ++ G
Sbjct: 238 CSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHG 297

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C V +I  A +L   M+ +G   D  +Y  L++  C+  K+ +A    R++L +   P+
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPN 353

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLN-DVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
               NTL++G    G L +A   +++  +N    PD FT+   + GLCK G +  A  + 
Sbjct: 354 NAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             +    CE  + TY  L+NGLCK G L+ A  + H +  +G   + V  + +I  LC++
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK 473

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
            ++  A +LL +M  K C P   T+ +L+ G  + ++  +   L H M  +  V ++++ 
Sbjct: 474 EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTY 533

Query: 578 SSKVVDLLSKDKKYRECLNQFRHLLF 603
           ++ +  LL +   +++ L     +LF
Sbjct: 534 NTLIHALLRRG-AFQKALTLVNDMLF 558


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 147/467 (31%), Positives = 241/467 (51%), Gaps = 38/467 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++ ILL  L KN + D    LF  +++ G  PD      +++ LCK G    A  +
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            GR     F P+   +N LI+G+C EGRI  A +L  ++     DPNVV+++ +IN LC 
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 199 TRNTLVALKLFEEM--------VNEFGAI------------------------CKPDVVT 226
           + N  +A  LF +M        ++ F  +                        C+P+VV 
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN++I GLC +G +++A ++  QM+     PNV TY+ LI GF    D   A   +  M+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +G +P+VVT+  M++  CK+   D+ N L+E M   G  P+T+T+N+ + G C  GR+ 
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A +L   M   GC  ++ +YN L++A  +  K E+A  L++E+ +  ++P+++TYNT+L
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK-C 465
            G  + G +G+AL+L  K  +    PDS T+ T I   CK G V  A Q+ + + + K  
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
              I TY  LI G C    ++ A     +  ++G  P+  T + ++ 
Sbjct: 592 HPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/478 (28%), Positives = 242/478 (50%), Gaps = 8/478 (1%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           +  + +F R+   G  P + + N L++ L           +   + +    PN  T+N L
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNIL 185

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           +  LC   R+  A +LF +++   C P+ VT+ T+++ LC+      A     E+   F 
Sbjct: 186 LKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELAGRF- 240

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
              KP V  YN++IDG+CK+G ++ A +LL +M D  ++PNV++Y+ +I   C   + + 
Sbjct: 241 ---KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  LF +M   G   ++ TF  +I      GK+ +   L +LMIQ G  P+ V YN+L+ 
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C  G +  A ++   M   GC  +V +Y+ILI+   K   +  A   +  M+S   RP
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +V+TY  ++  L +      A  L++KM L    P++ TF T+I GLC NG V  A+++ 
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLL 477

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + ++   C   I TYN L++ L +M + + A  LF  ++ +   P++VT +T+++   + 
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           G M +A  L      +   P  +T+ T++  + +  K      L+ ++++ K    D+
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI 595



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 249/485 (51%), Gaps = 12/485 (2%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGL--FPDLFVLNLLINCLCKMGITSGAFVVL 139
           +++ +++  L +  + D V  + +++  +G+    DLF+   +IN   ++G    A  + 
Sbjct: 75  STYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFIC--IINGYKRVGSAEQALKMF 132

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
            RI      P    +N L++ L +E +      L+  +      PNV T+N L+  LC+ 
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A KLF EM N+    C PD VTY +++  LCK G +D A+EL  + K     P+V
Sbjct: 193 DRVDAAHKLFVEMSNKG---CPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSV 244

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
             YN+LI G C     + A  L  EMMDNGV P+VV+++ +IN  C  G ++    L   
Sbjct: 245 PVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQ 304

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M  RG + +  T+  L+ G  + G++  A +L+  M+  GC  +V +YN LI+  C +  
Sbjct: 305 MFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGS 364

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +E+A+ +  +M      P+V TY+ L+ G  + G+L  A +  ++M  +   P+  T+  
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTC 424

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +D LCKN    +A  + + +    C     T+N  I GLC  GR++ A KL  R+Q  G
Sbjct: 425 MVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHG 484

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            +P++ T + ++  L +  + ++A  L  ++EA+N  P+ VT+ T+L GF +     + +
Sbjct: 485 CLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEAL 544

Query: 560 VLLHK 564
            L  K
Sbjct: 545 QLFGK 549



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 223/417 (53%), Gaps = 14/417 (3%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           +ING    G   +A ++F ++  F C P V  +N L++ L       +   L+  M  + 
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKD- 173

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC---VD 273
           G I  P+V TYN ++  LCK+  VD A +L ++M ++   P+ +TY +++   C    +D
Sbjct: 174 GLI--PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           D +E    F        +P V  +NA+I+  CK+G+++   +LL  M+  GV+P+ V+Y+
Sbjct: 232 DARELAGRF--------KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            +++  C+ G +  A  LF  M  +GC  +++++  LI       K+ +A+ L++ M+ +
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
              P+V+ YNTL+ GL   G+L +AL++ D+MQ +  +P+  T++  IDG  K+G ++ A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
            + +  + +  C   + TY C+++ LCK      A  L  ++  +G  P+ +T +T I  
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKG 463

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           LC  G+++ A  LL  M+   C+P+  T+  LL    + NK  +   L  ++ A  L
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 206/427 (48%), Gaps = 22/427 (5%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  +  L+  + K  + +  + L   +  NG+ P++   + +IN LC  G    AF +
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 139 LGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
             ++ LR C   N  TF  LI G    G++ EA  L+K +    C+PNVV +NTLI+GLC
Sbjct: 302 FAQMFLRGC-DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
              +   AL++ ++M     + C P+V TY+ +IDG  K G +  A E   +M      P
Sbjct: 361 SNGSLEEALQVCDQMQR---SGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV+TY  ++   C    + +A  L  +M   G  P+ +TFN  I   C +G+++   +LL
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLL 477

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M   G  P+  TYN L+D    + +   A  LF  + ++  + ++ +YN ++    + 
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFT 436
             + +A+ L+ + L     P  ITYNT++    + G +  A +L++++  + +  PD  T
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIIT 597

Query: 437 FATYIDGLCKNGFVLEAVQVF--QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           + + I G C N   +E    F  +AI    C     T+N L+   C           F  
Sbjct: 598 YTSLIWGAC-NWMNIEEAMAFLDKAINQGICP-NFATWNALVR--C----------FFDS 643

Query: 495 LQHKGPI 501
           L H GPI
Sbjct: 644 LGHMGPI 650



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 204/448 (45%), Gaps = 79/448 (17%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           F  +ING  R  +   ALK+F   + EFG  CKP V  YN ++D L            L 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYR-IGEFG--CKPTVRIYNHLLDAL------------LS 156

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           + K + INP                       L+  M  +G+ P+V T+N ++   CK+ 
Sbjct: 157 ENKFQMINP-----------------------LYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++D  ++L   M  +G  PD VTY +++   C  G+I  AREL     +   +  V  YN
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYN 248

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI+  CK+ ++E A+ L  EM+   + P+V++Y+ +++ L   GN+  A  L  +M L 
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
               +  TF   I G    G + EA+ +++ +    CE  +  YN LI+GLC  G L+ A
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIH--------------W--------------------- 513
            ++  ++Q  G +P+V T S +I               W                     
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           LCK    D+AN L+  M  + C P+ +TF T ++G   N +    + LL +M      + 
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHG-CLP 487

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +++  ++++D L +  KY E    F+ +
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEI 515



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 189/373 (50%), Gaps = 10/373 (2%)

Query: 183 DPN---VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
           DPN   ++  + ++  L   RN    L  F  + N      +    TY  +I+ L ++  
Sbjct: 32  DPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAF--QHTASTYRVMIERLGRECE 89

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D  + +L QMK   IN     +  +I G+  V   ++A  +F  + + G +P V  +N 
Sbjct: 90  MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +++    + K   +N L   M + G+ P+  TYN L+   C   R+  A +LFV M +KG
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  D  +Y  ++++ CK  K++DA    RE L+ R +PSV  YN L+ G+ + G +  A+
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDA----RE-LAGRFKPSVPVYNALIDGMCKEGRIEVAI 264

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           KL+ +M  N V P+  +++  I+ LC +G V  A  +F  +    C+  I T+  LI G 
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
              G+L  A  L+  +   G  P+VV  +T+IH LC  G +++A  +   M+   C+P+ 
Sbjct: 325 FMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384

Query: 540 VTFCTLLRGFVQN 552
            T+  L+ GF ++
Sbjct: 385 TTYSILIDGFAKS 397



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 157/309 (50%), Gaps = 4/309 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  MI+    P + ++  L+  L  N   +  + +  ++  +G  P++   ++LI
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +   K G   GA     R++     PN VT+  +++ LC      +A  L +K+ +  C 
Sbjct: 392 DGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCT 451

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN +TFNT I GLC       A+KL E M    G  C P++ TYN ++D L +    ++A
Sbjct: 452 PNTITFNTFIKGLCGNGRVEWAMKLLERMQ---GHGCLPNITTYNELLDALFRMNKYEEA 508

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L  +++ RN+ PN++TYN+++ GF       EA  LF + +  G  PD +T+N MI+ 
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568

Query: 304 NCKDGKMDKVNRLLE-LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
            CK GK+    +L+E +   +  +PD +TY SL+ G C    I  A       +++G   
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628

Query: 363 DVYSYNILI 371
           +  ++N L+
Sbjct: 629 NFATWNALV 637



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 147/283 (51%), Gaps = 6/283 (2%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N +  EA+   D M +    P +T+++IL+   AK+         + R+ S+G  P++  
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
              +++ LCK  +   A  ++ ++     TPNT+TFN  I GLC  GR+  A +L +++ 
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQ 481

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C PN+ T+N L++ L R      A  LF+E+        +P++VTYN+++ G  + G
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE---ARNLQPNLVTYNTVLYGFSRAG 538

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN--GVQPDVVT 296
            + +A +L  +   R   P+ ITYN++I  +C     K A  L +E + +     PD++T
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL-VERVSSMKEWHPDIIT 597

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
           + ++I   C    +++    L+  I +G+ P+  T+N+L+  F
Sbjct: 598 YTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 78/163 (47%)

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
           S   + +  TY  ++  L +   +     ++ +M+++ +      F   I+G  + G   
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A+++F  I    C+  +  YN L++ L    + +    L+  ++  G IP+V T + ++
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             LCK  ++D A+ L ++M  K C P  VT+ T++    +  K
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 276/576 (47%), Gaps = 41/576 (7%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +   EA   F  M +    P + ++  ++  L K +  D    + +++  NG+ PD
Sbjct: 223 KEGKV--GEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF- 174
               N LI+    +G    A  +   +      PNTVT +  +  LC  GRI EA   F 
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 175 ------KKLNVFACD----------------------------PNVVTFNTLINGLCRTR 200
                  KLN+ +                              PN   FN L+NG  +  
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A+ +FE+M         PDV+TY ++I   C+ G +D A +    M D+ + PN  
Sbjct: 401 MVREAMFIFEDMQKRG---LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFA 457

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            Y  LI GFC   D  +A+ L  E+ + G+ P +++F ++IN+ CK+G++ +  R+ +++
Sbjct: 458 VYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMI 517

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           I+ G   D   + SL+DG+CL+G++S A  +  +MVS G   D+ +Y  L+N  CK+ ++
Sbjct: 518 IRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRI 577

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           +D + L+RE+L + ++P+  TY  +L GLF  G    A ++  +M  + +     T++  
Sbjct: 578 DDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSIL 637

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           + GLC+N    EA+ VFQ +     +  I   N +I+ + K  R + A  LF  +   G 
Sbjct: 638 LTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGL 697

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           +P V T + M+  L KEG +++A  +   M      P+      ++R  ++  +  K  +
Sbjct: 698 VPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGI 757

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
            + ++   K ++ + S +S ++ L S   K+RE LN
Sbjct: 758 YMCRVDG-KSILFEASTASMLLSLFSCKGKHREHLN 792



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 258/533 (48%), Gaps = 41/533 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF-V 137
           P + +++IL+    + ++ D   + F  L   G+  D+ V++ L+  LC    T  A  V
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLING 195
           +  R+      P+ ++++ ++  +C +GR   A  + +        C  NVV ++T+++G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           L +      A  LF EM  +      P+VVTYNS+I  LCK   VDKA+ +L QM    +
Sbjct: 221 LFKEGKVGEACDLFHEMTQQG---VPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGV 277

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK--- 312
            P+ +TYN+LI G+  +  WK+A  +F EM   GV P+ VT +  + + CK G++++   
Sbjct: 278 QPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEARE 337

Query: 313 --------------------------------VNRLLELMIQRGVNPDTVTYNSLMDGFC 340
                                           ++ L  LM++ G+ P+   +N L++G+ 
Sbjct: 338 FFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYA 397

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G +  A  +F  M  +G   DV +Y  +I+A C+   ++DA+  +  M+ + + P+  
Sbjct: 398 KCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFA 457

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y  L+ G    G+L  A +L+ +++   + P   +FA+ I+ LCK G V EA ++F  I
Sbjct: 458 VYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMI 517

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                +  +  +  LI+G C +G++  A ++   +   G  PD+VT  T+++  CK G++
Sbjct: 518 IRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRI 577

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           D    L  ++  K   P+  T+  +L G     + +    +  +M    + V+
Sbjct: 578 DDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVT 630



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 207/434 (47%), Gaps = 40/434 (9%)

Query: 204 VALKLFEEMVNEFGA-ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           +A+ LF  M    G  +  P V TY+ +ID  C+   +D A      +  + +  +VI  
Sbjct: 82  LAVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVV 141

Query: 263 NSLICGFCCVDDWKEA-KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +SL+ G C      EA   LF  M + G  PD ++++ ++   C DG+      +L + +
Sbjct: 142 SSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAV 201

Query: 322 QRGVN-P-DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           ++G   P + V Y++++ G    G++  A +LF  M  +G   +V +YN +I+A CK + 
Sbjct: 202 KQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARA 261

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           V+ A  + R+M+   ++P  +TYNTL+ G   +G    A+++  +M    V+P++ T +T
Sbjct: 262 VDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCST 321

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY--------------------------- 472
           ++  LCK+G + EA + F ++     +L I +Y                           
Sbjct: 322 FVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDG 381

Query: 473 --------NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                   N L+NG  K G ++ A  +F  +Q +G  PDV+T   +IH  C+ G MD A 
Sbjct: 382 IVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAM 441

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           D    M  K   P+   +  L++GF  +    K   L++++  + L    LS +S +++ 
Sbjct: 442 DKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFAS-LINH 500

Query: 585 LSKDKKYRECLNQF 598
           L K+ +  E    F
Sbjct: 501 LCKEGRVFEAQRIF 514



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 126/242 (52%), Gaps = 4/242 (1%)

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK-LI 422
           VY+Y+ILI+  C+ ++++ A   +  +L + ++  VI  ++LL GL       +A+  L 
Sbjct: 103 VYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLF 162

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI--RNCKCELRIETYNCLINGLC 480
            +M     VPD+ +++T +  +C +G    A+ + +    +   C   +  Y+ +++GL 
Sbjct: 163 HRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLF 222

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G++  AC LFH +  +G  P+VVT +++IH LCK   +DKA  +L  M      P  V
Sbjct: 223 KEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNV 282

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRH 600
           T+ TL+ G+    +  + V +  +M +  ++ + ++ S+  V  L K  +  E    F  
Sbjct: 283 TYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCST-FVAFLCKHGRIEEAREFFDS 341

Query: 601 LL 602
           +L
Sbjct: 342 ML 343


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 163/571 (28%), Positives = 278/571 (48%), Gaps = 34/571 (5%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G + +  A+  F  M K+  SP + ++  ++  L +N + D    
Sbjct: 219 DVFSFTNVINALCKGGKMEN--AIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFE 276

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L +++   G+ P+L     LIN L K+        +L  ++ + F PN V FN LI+G C
Sbjct: 277 LKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYC 336

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI--- 219
             G I  A ++   +      P  VT  +L+ G C++     A    EE+++   +I   
Sbjct: 337 KMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD 396

Query: 220 ---------CK--------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
                    CK                    P  +    ++ GLCKDG   +A EL  ++
Sbjct: 397 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 456

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
            ++    + +T N+LI G C      EA  +  EM++ G+  D +T+NA+I   C +GK+
Sbjct: 457 LEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKV 516

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           +   RL E M +RG+ PD  TYN L+ G C VG++  A +L+    + G   ++++Y I+
Sbjct: 517 EGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIM 576

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +   CK  ++ED   L+ E+LS+++  + I YN ++    Q GN+  AL+L++ M+   +
Sbjct: 577 MEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGI 636

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +P+  T+++ I G+C  G V +A  +   +R       +  Y  LI G CK+G++ TA  
Sbjct: 637 LPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAES 696

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
            +  +      P+  T + MI   CK G M+KAN+LL+ M+    VP  VT+  L  GF 
Sbjct: 697 TWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFC 756

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           + N       +  +MA E L V +++ ++ V
Sbjct: 757 KANDMDNAFKVCDQMATEGLPVDEITYTTLV 787



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 257/520 (49%), Gaps = 39/520 (7%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  F  + +    P + +    L+ L K  +++    +F R+ S G  PD+F    +IN
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 228

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK G    A  +  ++ +   +PN VT+N +INGLC  GR+  A  L +K+ V    P
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 288

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N+ T+  LINGL +         + +EM+   GA   P+VV +N++IDG CK G ++ A 
Sbjct: 289 NLKTYGALINGLIKLNFFDKVNHILDEMI---GAGFNPNVVVFNNLIDGYCKMGNIEGAL 345

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG--VQPD----VVTF- 297
           ++   M  +NI P  +T  SL+ GFC  D  + A+    E++ +G  + PD    VV + 
Sbjct: 346 KIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWL 405

Query: 298 -------------NAMINYN---------------CKDGKMDKVNRLLELMIQRGVNPDT 329
                          M++ N               CKDGK  +   L   ++++G     
Sbjct: 406 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 465

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VT N+L+ G C  G++  A  +   M+ +G   D  +YN LI   C + KVE    L  E
Sbjct: 466 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 525

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    I+P + TYN LL GL  VG L DA+KL D+ + + ++ +  T+   ++G CK   
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +   +F  + + K EL    YN +I   C+ G +  A +L   ++ KG +P+  T S+
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           +IH +C  G ++ A  L+ +M  +  VP+ V +  L+ G+
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGY 685



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 226/468 (48%), Gaps = 39/468 (8%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+  T NF ++ L       +   +F+ ++  AC P+V +F  +IN LC+      A++L
Sbjct: 184 PSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIEL 242

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F +M  + G    P+VVTYN II+GLC++G +D A EL  +M  + + PN+ TY +LI G
Sbjct: 243 FMKM-EKLGI--SPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALING 299

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
              ++ + +   +  EM+  G  P+VV FN +I+  CK G ++   ++ ++MI + + P 
Sbjct: 300 LIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 359

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKG---------------CR----HDVYSYN- 368
           +VT  SLM GFC   +I  A      ++S G               C+    H  + +  
Sbjct: 360 SVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTK 419

Query: 369 ---------------ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
                          +L+   CKD K  +A  L+  +L +    S +T N L+ GL   G
Sbjct: 420 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAG 479

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L +A +++ +M    +  D  T+   I G C  G V    ++ + +     +  I TYN
Sbjct: 480 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYN 539

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            L+ GLC +G+L  A KL+   +  G I ++ T   M+   CK  +++   +L  ++ +K
Sbjct: 540 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 599

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
               + + +  +++   QN   +  + LL  M ++ ++ +  + SS +
Sbjct: 600 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLI 647



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 168/341 (49%), Gaps = 4/341 (1%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           +F  + K  P+  +TS   L+  L    +      + K +   GL  D    N LI   C
Sbjct: 453 WFRLLEKGSPASKVTS-NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFC 511

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
             G   G F +   + +    P+  T+NFL+ GLC  G++ +A +L+ +        N+ 
Sbjct: 512 NEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIH 571

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+  ++ G C+         LF E++++   +   + + YN II   C++G V  A +LL
Sbjct: 572 TYGIMMEGYCKANRIEDVENLFNELLSKKMEL---NSIVYNIIIKAHCQNGNVAAALQLL 628

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             MK + I PN  TY+SLI G C +   ++AK L  EM   G  P+VV + A+I   CK 
Sbjct: 629 ENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKL 688

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G+MD        MI   ++P+  TY  ++DG+C +G + +A  L + M   G   DV +Y
Sbjct: 689 GQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTY 748

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           N+L N  CK   +++A  +  +M +E +    ITY TL+ G
Sbjct: 749 NVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 182/388 (46%), Gaps = 38/388 (9%)

Query: 91  LAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
           L K  +Y +     K + S    P   +L +L+  LCK G    A  +  R+L      +
Sbjct: 405 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 464

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
            VT N LI+GLC  G++ EA+R+ K++       + +T+N LI G C         +L E
Sbjct: 465 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 524

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           EM        +PD+ TYN ++ GLC  G +D A +L  + K   +  N+ TY  ++ G+C
Sbjct: 525 EMTKRG---IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYC 581

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
             +  ++ + LF E++   ++ + + +N +I  +C++G +    +LLE M  +G+ P+  
Sbjct: 582 KANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCA 641

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TY+SL+ G C +G +  A+ L   M  +G   +V  Y  LI   CK  +++ A   + EM
Sbjct: 642 TYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 701

Query: 391 LSERIRPS-----------------------------------VITYNTLLSGLFQVGNL 415
           +S  I P+                                   V+TYN L +G  +  ++
Sbjct: 702 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDM 761

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDG 443
            +A K+ D+M    +  D  T+ T + G
Sbjct: 762 DNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 135/268 (50%), Gaps = 3/268 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K    P + ++  LL  L    + D  + L+    ++GL  ++    +++   CK   
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
                 +   +L      N++ +N +I   C  G +  A +L + +      PN  T+++
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+G+C       A  L +EM  E G +  P+VV Y ++I G CK G +D A+   L+M 
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKE-GFV--PNVVCYTALIGGYCKLGQMDTAESTWLEMI 702

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             NI+PN  TY  +I G+C + + ++A  L I+M ++G+ PDVVT+N + N  CK   MD
Sbjct: 703 SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMD 762

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGF 339
              ++ + M   G+  D +TY +L+ G+
Sbjct: 763 NAFKVCDQMATEGLPVDEITYTTLVHGW 790


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 258/502 (51%), Gaps = 8/502 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P    T F I+ ++ A+    D + ++   +   G      + ++++   C+ G    A 
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADAL-TVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
             L  +     T ++   N +++ +C +G + E   L +KL  F C+P++V++N ++ GL
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 197 CRTRNTLVALKLFEEMVNEFGAI-------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           C  +      +L  EMV    A+       C PD+  Y +IIDG+CKDG  + A ++L +
Sbjct: 224 CMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 283

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M    + PNV+ YN+++ G C  + W+EA+ L  EM       D VTFN ++++ C++G 
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+V  LLE M++ G  PD +TY ++++GFC  G +  A  L  +M + GC+ +  SY I
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           ++   C+ ++  DA  L   M+ +   P+ +T+NTL++ + + G    A++L+ +M +N 
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
             PD  +++T IDGL K G   EA+++   + N         Y+ + + L + GR     
Sbjct: 464 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII 523

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++F  +Q      D    + +I  LCK  + D+A D    M +  C+P+E T+  L+RG 
Sbjct: 524 QMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 583

Query: 550 VQNNKKSKVVVLLHKMAAEKLV 571
                  +   LL ++ + + V
Sbjct: 584 ASEGLVREAQDLLSELCSRRAV 605



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 230/497 (46%), Gaps = 38/497 (7%)

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
           + L++ G    +   N +I   C+ G  + A  +   +      PN  T+  ++  LCA 
Sbjct: 65  RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCAR 121

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT---RNTLVALKLFEEMVNEFGAICK 221
           G I +A  +  ++ +  C       + ++   CR    R+ + AL++           C 
Sbjct: 122 GLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH------AKGCT 175

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
            D    N ++  +C+ G VD+  ELL ++      P++++YN+++ G C    W + + L
Sbjct: 176 LDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEEL 235

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
            +E                         M +V+  L  M + G  PD   Y +++DG C 
Sbjct: 236 MVE-------------------------MVRVHEALSQMPEHGCTPDLRMYATIIDGICK 270

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G    A ++   M S G + +V  YN ++   C  ++ E+A  L  EM  E      +T
Sbjct: 271 DGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVT 330

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +N L+    Q G +   ++L+++M  +  +PD  T+ T I+G CK G V EAV + + + 
Sbjct: 331 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 390

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
            C C+    +Y  ++ GLC+  R   A +L   +  +G +P+ VT +T+I+++CK+G  +
Sbjct: 391 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAE 450

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A +LL  M    C P  +++ T++ G  +  K  + + LL+ M   K +  +  + S +
Sbjct: 451 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM-INKGITPNTIIYSSM 509

Query: 582 VDLLSKDKKYRECLNQF 598
              LS++ +  + +  F
Sbjct: 510 ASALSREGRTDKIIQMF 526



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 3/223 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV     M      P   S+TI+L  L + +++     L   +   G  P+    N L
Sbjct: 380 DEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTL 439

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN +CK G+   A  +L ++L +  +P+ ++++ +I+GL   G+  EA  L   +     
Sbjct: 440 INFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 499

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN + ++++ + L R   T   +++F+ + +   A  + D   YN++I  LCK    D+
Sbjct: 500 TPNTIIYSSMASALSREGRTDKIIQMFDSIQD---ATVRSDAALYNAVISSLCKRWETDR 556

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           A +    M      PN  TY  LI G       +EA+ L  E+
Sbjct: 557 AIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 3/182 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI+    P   +F  L+  + K    +  + L K++  NG  PDL   + +I+ L K G 
Sbjct: 424 MIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 483

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T  A  +L  ++    TPNT+ ++ + + L  EGR  +  ++F  +       +   +N 
Sbjct: 484 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 543

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I+ LC+   T  A+  F  MV+     C P+  TY  +I GL  +G V +A++LL ++ 
Sbjct: 544 VISSLCKRWETDRAIDFFAYMVSNG---CMPNESTYTILIRGLASEGLVREAQDLLSELC 600

Query: 252 DR 253
            R
Sbjct: 601 SR 602



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 2/135 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  ++   K+G   + EA+   + MI    +P    ++ + + L++  + D ++ 
Sbjct: 467 DLISYSTVIDGLGKAGK--TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQ 524

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +    +  D  + N +I+ LCK   T  A      ++ +   PN  T+  LI GL 
Sbjct: 525 MFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLA 584

Query: 163 AEGRIMEAARLFKKL 177
           +EG + EA  L  +L
Sbjct: 585 SEGLVREAQDLLSEL 599


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 243/474 (51%), Gaps = 11/474 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+   + M  ++PS        L+  L  + +      +          PD+   N +
Sbjct: 76  EEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACE-----PDVMAYNAM 130

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +   C  G    A  ++  +      P++ T+N LI GLC  GR   A  +   +    C
Sbjct: 131 VAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGC 187

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VVT+  L+   C+      A+KL +EM  +    C PD++TYN +++G+C++G VD 
Sbjct: 188 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKG---CAPDIITYNVVVNGICQEGRVDD 244

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E L  +      PN ++YN ++ G C  + W++A+ L  EM   G  P+VVTFN +I+
Sbjct: 245 AIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLIS 304

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           + C+ G ++    +L+ + + G  P++++YN ++  FC   ++ RA      MVS+GC  
Sbjct: 305 FLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYP 364

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ SYN L+ A C+  +V+ AV L  ++  +   P +I+YNT++ GL + G   +AL+L+
Sbjct: 365 DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELL 424

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M    + PD  T++T   GLC+   + EA++ F  +++         YN ++ GLCK 
Sbjct: 425 NEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKR 484

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
                A  LF  +   G +P+  T + +I  L  EG + +A +LL ++ ++  V
Sbjct: 485 RETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 236/454 (51%), Gaps = 11/454 (2%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI  LC  G T+ A     R+L +C  P+ + +N ++ G C  G++  A RL   + +  
Sbjct: 100 LIKKLCASGRTAEAR----RVLAAC-EPDVMAYNAMVAGYCVTGQLDAARRLVADMPM-- 152

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +P+  T+NTLI GLC    T  AL + ++M+      C PDVVTY  +++  CK     
Sbjct: 153 -EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRG---CVPDVVTYTILLEATCKRSGYK 208

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A +LL +M+ +   P++ITYN ++ G C      +A      +  +G +P+ V++N ++
Sbjct: 209 QAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVL 268

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C   + +   +L+  M Q+G  P+ VT+N L+   C  G +  A E+   +   GC 
Sbjct: 269 KGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCT 328

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  SYN +++A CK +K++ A+     M+S    P +++YNTLL+ L + G +  A++L
Sbjct: 329 PNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVEL 388

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           + +++     P   ++ T IDGL K G   EA+++   +     +  I TY+ + +GLC+
Sbjct: 389 LHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCR 448

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             R++ A + F ++Q  G  P+ V  + ++  LCK  +   A DL + M +  C+P+E T
Sbjct: 449 EDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNEST 508

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           +  L+ G        +   LL ++ +  +V   L
Sbjct: 509 YTILIEGLTYEGLVKEARELLGELCSRGVVSKGL 542



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 197/386 (51%), Gaps = 8/386 (2%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           ++ + L  R ++GN     A+   D M++    P + ++TILL    K   Y   + L  
Sbjct: 161 TLIRGLCGRGRTGN-----ALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLD 215

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            + + G  PD+   N+++N +C+ G    A   L  +      PNTV++N ++ GLC   
Sbjct: 216 EMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAE 275

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           R  +A +L  +++     PNVVTFN LI+ LCR      A+++ ++ + ++G  C P+ +
Sbjct: 276 RWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQ-IPKYG--CTPNSL 332

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           +YN I+   CK   +D+A   +  M  R   P++++YN+L+   C   +   A  L  ++
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 392

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
            D G  P ++++N +I+   K GK  +   LL  M+ +G+ PD +TY+++  G C   RI
Sbjct: 393 KDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRI 452

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A   F  +   G R +   YN ++   CK ++  +A+ L+  M+S    P+  TY  L
Sbjct: 453 EEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTIL 512

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVV 431
           + GL   G + +A +L+ ++    VV
Sbjct: 513 IEGLTYEGLVKEARELLGELCSRGVV 538


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 243/485 (50%), Gaps = 12/485 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI+    P   + + L+  L K     +   L  ++   G+ P LFV N LIN +CK G 
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   +      PN VT++ LI+  C  G++  A     K+        V  +++
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+G C+      A  LF+EM+       KP+VV Y S+I G CK+G +  A  L  +M 
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMI---ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + I+PN  T+ +LI G C  +   EA  LF EM++  V P+ VT+N +I  +CK+G   
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS--------KGCRHD 363
           +   LL+ M+++G+ PDT TY  L+ G C  GR+S ARE    +          +GC  +
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPN 607

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +Y  LIN  CK   ++ A  L REML+    P+  TY   L  L   GN+  A++L D
Sbjct: 608 VVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHD 667

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            + L   + ++ T+   I G CK G + EA +V   + +        +Y+ +I   C+ G
Sbjct: 668 VL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRG 726

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            LK A KL+  + ++G  PD V  + +I+  C  G++ KA +L  DM  +   P+  T+ 
Sbjct: 727 DLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYN 786

Query: 544 TLLRG 548
           +L+ G
Sbjct: 787 SLIHG 791



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/491 (30%), Positives = 252/491 (51%), Gaps = 11/491 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + + + +L  L + +Q+   + LF  + S+GL PD++V   ++  LC++     A  V
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +GR+  S    +  T+N  I GLC   R+ EA  +   L+      +V T+ TL+ GLC+
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                   ++  EM+ EFG +  P     ++++DGL K G +  A +L+ ++K   + P+
Sbjct: 298 VEEFEAGEEMMNEMI-EFGFV--PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           +  YN+LI   C      EA+ LF  M   G+ P+ VT++ +I+  CK GK+D     L 
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M + G+      Y+SL+ G C +G++  A+ LF  M++ G + +V  Y  LI+  CK+ 
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           ++ +A  LY EM  + I P+  T+  L+SGL     + +A KL  +M   +V+P+  T+ 
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH- 497
             I+G CK G  + A ++   +          TY  LI+GLC  GR+  A +  + LQ  
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594

Query: 498 -------KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
                  +G +P+VVT + +I+ LCK G MDKA  L  +M A N +P++ T+   L    
Sbjct: 595 QQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 654

Query: 551 QNNKKSKVVVL 561
                 K + L
Sbjct: 655 SEGNIEKAIQL 665



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 240/474 (50%), Gaps = 12/474 (2%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++  L+  L K ++++    +   +   G  P    ++ L++ L K G    AF ++ ++
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
            +    P+   +N LIN +C +G++ EA  LF  +      PN VT++ LI+  C+    
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            VAL    +M  E G   K  V  Y+S+I G CK G +  AK L  +M    + PNV+ Y
Sbjct: 407 DVALHFLGKMT-EVG--IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIY 463

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            SLI G+C   +   A  L+ EM   G+ P+  TF A+I+  C   +M + N+L   M++
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
             V P+ VTYN L++G C  G   RA EL   MV KG   D Y+Y  LI+  C   +V +
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583

Query: 383 AVCLYREMLSERIR--------PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           A     ++  E+ +        P+V+TY  L++GL ++G +  A  L  +M  ++ +P+ 
Sbjct: 584 AREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 643

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+A ++D L   G + +A+Q+   +        + TYN LI G CK+GR++ A ++   
Sbjct: 644 NTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTV-TYNILIRGFCKLGRIQEAAEVLVN 702

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           +   G  PD ++ ST+I+  C+ G + +A  L   M  +   P  V +  L+ G
Sbjct: 703 MIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYG 756



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/389 (33%), Positives = 210/389 (53%), Gaps = 12/389 (3%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A++F   M ++     +  ++ L++   K  +     SLF  + +NGL P++ +   LI+
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G    AF +   +     +PNT TF  LI+GLC   R+ EA +LF ++  +   P
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N VT+N LI G C+  NT+ A +L +EMV E G +  PD  TY  +I GLC  G V +A+
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMV-EKGLV--PDTYTYRPLISGLCSTGRVSEAR 585

Query: 245 ELL--LQMKDRNIN------PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           E +  LQ + + +N      PNV+TY +LI G C +    +A+ L  EM+ +   P+  T
Sbjct: 586 EFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNT 645

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +   ++Y   +G ++K  +L +++++ G   +TVTYN L+ GFC +GRI  A E+ V+M+
Sbjct: 646 YACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMI 704

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G   D  SY+ +I   C+   +++A+ L+  ML+  + P  + YN L+ G    G L 
Sbjct: 705 DSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELT 764

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLC 445
            A +L D M    V P+  T+ + I G C
Sbjct: 765 KAFELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 266/569 (46%), Gaps = 26/569 (4%)

Query: 19  RCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLND-------RHKSGNITS-------NE 64
           +CNF  + G     +T + +    DG  + + + D       R  SG +           
Sbjct: 139 KCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRM 198

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A++ FD ++     P +  +T ++  L + K +     +  R+ S+G    +   N+ I 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK      A  +   +       +  T+  L+ GLC          +  ++  F   P
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVP 318

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +    + L++GL +  N   A  L  + V +FG    P +  YN++I+ +CKDG +D+A+
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNK-VKKFGV--APSLFVYNALINSMCKDGKLDEAE 375

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            L   M  + + PN +TY+ LI  FC       A     +M + G++  V  ++++I+ +
Sbjct: 376 SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGH 435

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK GK+     L + MI  G+ P+ V Y SL+ G+C  G +  A  L+  M  KG   + 
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           Y++  LI+  C   ++ +A  L+ EM+   + P+ +TYN L+ G  + GN   A +L+D+
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK--------CELRIETYNCLI 476
           M    +VPD++T+   I GLC  G V EA +    ++  +        C   + TY  LI
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALI 615

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           NGLCK+G +  A  L   +     +P+  T +  + +L  EG ++KA   L D+  +  +
Sbjct: 616 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFL 674

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            + VT+  L+RGF +  +  +   +L  M
Sbjct: 675 ANTVTYNILIRGFCKLGRIQEAAEVLVNM 703



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 227/475 (47%), Gaps = 47/475 (9%)

Query: 137 VVLGRILRSC-FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
           +V+ R++  C   P   T + ++NGL    +   A  LF ++      P+V  +  ++  
Sbjct: 165 LVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRS 224

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           LC  ++ + A ++   M +   + C   V TYN  I GLCK+  V +A E+   +  + +
Sbjct: 225 LCELKDFIRAREVIGRMES---SGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGL 281

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMD---------------------------- 287
             +V TY +L+ G C V++++  + +  EM++                            
Sbjct: 282 RADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFD 341

Query: 288 -------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
                   GV P +  +NA+IN  CKDGK+D+   L   M  +G+ P+ VTY+ L+D FC
Sbjct: 342 LVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFC 401

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G++  A      M   G +  VY Y+ LI+ +CK  K+  A  L+ EM++  ++P+V+
Sbjct: 402 KRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVV 461

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y +L+SG  + G L +A +L  +M    + P+++TF   I GLC    + EA ++F  +
Sbjct: 462 IYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                     TYN LI G CK G    A +L   +  KG +PD  T   +I  LC  G++
Sbjct: 522 VEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581

Query: 521 DKANDLLLDM--------EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            +A + + D+        E + C+P+ VT+  L+ G  +     K  +L  +M A
Sbjct: 582 SEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLA 636



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 240/492 (48%), Gaps = 20/492 (4%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKP---SPGMTSFTILLTMLAKNKQYDTVV 101
            +++  ++   K GNI S      FD + K+K    +P +  +  L+  + K+ + D   
Sbjct: 321 AAVSNLVDGLRKKGNIGSA-----FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           SLF  +   GLFP+    ++LI+  CK G    A   LG++           ++ LI+G 
Sbjct: 376 SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGH 435

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  G++  A  LF ++      PNVV + +LI+G C+      A +L+ EM    G    
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT---GKGIS 492

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+  T+ ++I GLC    + +A +L  +M + N+ PN +TYN LI G C   +   A  L
Sbjct: 493 PNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFEL 552

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL--------ELMIQRGVNPDTVTYN 333
             EM++ G+ PD  T+  +I+  C  G++ +    +        +L    G  P+ VTY 
Sbjct: 553 LDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYT 612

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +L++G C +G + +A  L   M++     +  +Y   ++    +  +E A+ L+ ++L E
Sbjct: 613 ALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH-DVLLE 671

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
               + +TYN L+ G  ++G + +A +++  M  + + PD  +++T I   C+ G + EA
Sbjct: 672 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 731

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           +++++++ N         YN LI G C  G L  A +L   +  +G  P+  T +++IH 
Sbjct: 732 IKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791

Query: 514 LCKEGQMDKAND 525
            C    +    D
Sbjct: 792 TCLMSSVSSTAD 803



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 174/379 (45%), Gaps = 58/379 (15%)

Query: 32  PKTDLSSHHFKDGT-SIAKFLNDRHKSGNITSNEAVY------------------FFDCM 72
           P + L S H K G    AK L D   +  +  N  +Y                   +  M
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 73  IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
                SP   +FT L++ L    +      LF  +    + P+    N+LI   CK G T
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNT 546

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF-------KKLN-VFACDP 184
             AF +L  ++     P+T T+  LI+GLC+ GR+ EA           +KLN +  C P
Sbjct: 547 VRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLP 606

Query: 185 NVVTFNTLINGLCRT----------RNTLVALKL--------FEEMVNEFGAICKP---- 222
           NVVT+  LINGLC+           R  L +  L        F + +   G I K     
Sbjct: 607 NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH 666

Query: 223 ---------DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
                    + VTYN +I G CK G + +A E+L+ M D  I+P+ I+Y+++I  +C   
Sbjct: 667 DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRG 726

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           D KEA  L+  M++ GV PD V +N +I   C  G++ K   L + M++RGV P+  TYN
Sbjct: 727 DLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYN 786

Query: 334 SLMDGFCLVGRISRARELF 352
           SL+ G CL+  +S   + F
Sbjct: 787 SLIHGTCLMSSVSSTADYF 805



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 180/388 (46%), Gaps = 3/388 (0%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           F+ LI    + R  L  L +   M+ + G +  P + T + +++GL +      A  L  
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMM-DCGIL--PQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           ++    + P+V  Y +++   C + D+  A+ +   M  +G    V T+N  I   CK+ 
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ +   +  L+  +G+  D  TY +L+ G C V       E+   M+  G      + +
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L++   K   +  A  L  ++    + PS+  YN L++ + + G L +A  L + M   
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            + P+  T++  ID  CK G +  A+     +     +  +  Y+ LI+G CK+G+L+ A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             LF  +   G  P+VV  +++I   CKEG++  A  L  +M  K   P+  TF  L+ G
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISG 504

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
               N+ ++   L  +M    ++ ++++
Sbjct: 505 LCHANRMAEANKLFGEMVEWNVIPNEVT 532



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 106/224 (47%)

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M+  G    + + + ++N   + ++   A+ L+ E++S  +RP V  Y  ++  L ++ +
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
              A ++I +M+ +       T+  +I GLCKN  V EAV++   +        + TY  
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L+ GLCK+   +   ++ + +   G +P     S ++  L K+G +  A DL+  ++   
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
             PS   +  L+    ++ K  +   L + M  + L  +D++ S
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYS 394


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 161/505 (31%), Positives = 254/505 (50%), Gaps = 4/505 (0%)

Query: 73  IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
           IK+   P   SF IL+       +    +    +++  G  PD    N +++ L K  + 
Sbjct: 205 IKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLL 264

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
             A  +L  +     +PN  T+N L+ G C  G + EA ++ + +      P V T+N L
Sbjct: 265 QEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNML 324

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           +NG C       A ++ +EM  +   +  PDVVTYN++IDG  +     +   L+ +M  
Sbjct: 325 VNGFCNDGKIDEAFRIRDEM-EKMNVL--PDVVTYNTLIDGCSQWRDSSEVYSLIEEMDK 381

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           + +  N +TYN ++   C   +  EA     +M +NG+ PD VT+N +I   CK GKM K
Sbjct: 382 KGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGK 441

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             R+++ M  +G+  DT T N+++   C+  ++  A  L  S   +G   D  SY ILI 
Sbjct: 442 AFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILIL 501

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
              KD+K + A+ L+ EM   +I PS ITYN+++ GL Q   +  A+  +++M  N +VP
Sbjct: 502 GYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVP 561

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D  T+   I G C  G V +A Q    +     +  + T N L+ GLC+ G L+ A KLF
Sbjct: 562 DETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLF 621

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           + L  KG   DVVT +T+I  LCKEG+ + A DLL +MEAK   P + T+  ++      
Sbjct: 622 NTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDA 681

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSL 577
            +  +      KM  E  +V D +L
Sbjct: 682 GRIKEAEEFTLKM-VESGIVHDQNL 705



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 220/439 (50%), Gaps = 6/439 (1%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC---AEGRIMEA 170
           P   +L+  I    +M     A  +  ++ R  + PN +T N L+N L    +   I+ A
Sbjct: 138 PSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLA 197

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
            ++ K        PN  +FN LI G C       AL    +M +EFG  C PD V+YN+I
Sbjct: 198 RQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKM-SEFG--CVPDTVSYNTI 254

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           +D L K   + +A++LLL MK + ++PN  TYN L+CG+C +   KEA  +   M  N +
Sbjct: 255 LDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNL 314

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P V T+N ++N  C DGK+D+  R+ + M +  V PD VTYN+L+DG       S    
Sbjct: 315 LPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYS 374

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           L   M  KG + +  +YNI++   CK   + +A     +M    + P  +TYNTL+    
Sbjct: 375 LIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYC 434

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + G +G A +++D+M    +  D++T  T +  LC    + EA  +  +       L   
Sbjct: 435 KAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEV 494

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           +Y  LI G  K  +   A  L+  ++ +  +P  +T +++I  LC+  ++D+A D L +M
Sbjct: 495 SYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEM 554

Query: 531 EAKNCVPSEVTFCTLLRGF 549
                VP E T+  ++ GF
Sbjct: 555 LENGLVPDETTYNIIIHGF 573



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 218/451 (48%), Gaps = 28/451 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    D M KM   P + ++  L+   ++ +    V SL + ++  G+  +    N++
Sbjct: 335 DEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNII 394

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  +CK G  + A   L ++  +  +P+ VT+N LI   C  G++ +A R+  ++     
Sbjct: 395 LKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGL 454

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +  T NT+++ LC  +    A  L     ++ G I   D V+Y  +I G  KD   D+
Sbjct: 455 KIDTWTLNTILHCLCVEKKLDEAYNLLCS-ASKRGYIL--DEVSYGILILGYFKDEKGDR 511

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +MK+R I P+ ITYNS+I G C      +A     EM++NG+ PD  T+N +I+
Sbjct: 512 ALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIH 571

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C +G ++K  +    MI+    PD  T N L+ G C  G + +A +LF ++VSKG   
Sbjct: 572 GFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDI 631

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV +YN +I++ CK+ K E+A  L  EM ++++ P   TY  +++ L   G + +A +  
Sbjct: 632 DVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFT 691

Query: 423 DKMQLNDVVPD-----------------------SFTFATYIDGLCKNGFVLEAVQVFQA 459
            KM  + +V D                       S  ++  I+ LC      +A+ +F  
Sbjct: 692 LKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVE 751

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +      L   TY  L+ GL K  R K+  K
Sbjct: 752 VTKEGVALNKYTYLNLMEGLIK--RRKSTSK 780



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 231/495 (46%), Gaps = 19/495 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    + M +    P + ++ +L+     + + D    +   +    + PD+   N LI
Sbjct: 301 EATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLI 360

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +   +   +S  + ++  + +     N VT+N ++  +C +G + EA     K+      
Sbjct: 361 DGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLS 420

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+NTLI   C+      A ++ +EM ++     K D  T N+I+  LC +  +D+A
Sbjct: 421 PDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKG---LKIDTWTLNTILHCLCVEKKLDEA 477

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL     R    + ++Y  LI G+   +    A  L+ EM +  + P  +T+N++I  
Sbjct: 478 YNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGG 537

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+  K+D+    L  M++ G+ PD  TYN ++ GFCL G + +A +    M+    + D
Sbjct: 538 LCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPD 597

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           VY+ NIL+   C++  +E A+ L+  ++S+     V+TYNT++S L + G   +A  L+ 
Sbjct: 598 VYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLT 657

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+   + PD +T+   I  L   G + EA +           L++     + +   K+G
Sbjct: 658 EMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEF---------TLKMVESGIVHDQNLKLG 708

Query: 484 RLKT--ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
           + +     ++      K      +  S  I+ LC + +   A  L +++  +    ++ T
Sbjct: 709 KGQNVLTSEVSEHFDFKS-----IAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYT 763

Query: 542 FCTLLRGFVQNNKKS 556
           +  L+ G ++  K +
Sbjct: 764 YLNLMEGLIKRRKST 778


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 147/467 (31%), Positives = 241/467 (51%), Gaps = 38/467 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++ ILL  L KN + D    LF  +++ G  PD      +++ LCK G    A  +
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            GR     F P+   +N LI+G+C EGRI  A +L  ++     DPNVV+++ +IN LC 
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 199 TRNTLVALKLFEEM--------VNEFGAI------------------------CKPDVVT 226
           + N  +A  LF +M        ++ F  +                        C+P+VV 
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN++I GLC +G +++A ++  QM+     PNV TY+ LI GF    D   A   +  M+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +G +P+VVT+  M++  CK+   D+ N L+E M   G  P+T+T+N+ + G C  GR+ 
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A +L   M   GC  ++ +YN L++A  +  K E+A  L++E+ +  ++P+++TYNT+L
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK-C 465
            G  + G +G+AL+L  K  +    PDS T+ T I   CK G V  A Q+ + + + K  
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
              I TY  LI G C    ++ A     +  ++G  P+  T + ++ 
Sbjct: 592 HPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/478 (28%), Positives = 242/478 (50%), Gaps = 8/478 (1%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           +  + +F R+   G  P + + N L++ L           +   + +    PN  T+N L
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNIL 185

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           +  LC   R+  A +LF +++   C P+ VT+ T+++ LC+      A     E+   F 
Sbjct: 186 LKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELAGRF- 240

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
              KP V  YN++IDG+CK+G ++ A +LL +M D  ++PNV++Y+ +I   C   + + 
Sbjct: 241 ---KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  LF +M   G   ++ TF  +I      GK+ +   L +LMIQ G  P+ V YN+L+ 
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C  G +  A ++   M   GC  +V +Y+ILI+   K   +  A   +  M+S   RP
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +V+TY  ++  L +      A  L++KM L    P++ TF T+I GLC NG V  A+++ 
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLL 477

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + ++   C   I TYN L++ L +M + + A  LF  ++ +   P++VT +T+++   + 
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           G M +A  L      +   P  +T+ T++  + +  K      L+ ++++ K    D+
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI 595



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 249/485 (51%), Gaps = 12/485 (2%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGL--FPDLFVLNLLINCLCKMGITSGAFVVL 139
           +++ +++  L +  + D V  + +++  +G+    DLF+   +IN   ++G    A  + 
Sbjct: 75  STYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFIC--IINGYKRVGSAEQALKMF 132

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
            RI      P    +N L++ L +E +      L+  +      PNV T+N L+  LC+ 
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A KLF EM N+    C PD VTY +++  LCK G +D A+EL  + K     P+V
Sbjct: 193 DRVDAAHKLFVEMSNKG---CPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSV 244

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
             YN+LI G C     + A  L  EMMDNGV P+VV+++ +IN  C  G ++    L   
Sbjct: 245 PVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQ 304

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M  RG + +  T+  L+ G  + G++  A +L+  M+  GC  +V +YN LI+  C +  
Sbjct: 305 MFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGS 364

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +E+A+ +  +M      P+V TY+ L+ G  + G+L  A +  ++M  +   P+  T+  
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTC 424

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +D LCKN    +A  + + +    C     T+N  I GLC  GR++ A KL  R+Q  G
Sbjct: 425 MVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHG 484

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            +P++ T + ++  L +  + ++A  L  ++EA+N  P+ VT+ T+L GF +     + +
Sbjct: 485 CLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEAL 544

Query: 560 VLLHK 564
            L  K
Sbjct: 545 QLFGK 549



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 223/417 (53%), Gaps = 14/417 (3%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           +ING    G   +A ++F ++  F C P V  +N L++ L       +   L+  M  + 
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKD- 173

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC---VD 273
           G I  P+V TYN ++  LCK+  VD A +L ++M ++   P+ +TY +++   C    +D
Sbjct: 174 GLI--PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           D +E    F        +P V  +NA+I+  CK+G+++   +LL  M+  GV+P+ V+Y+
Sbjct: 232 DARELAGRF--------KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            +++  C+ G +  A  LF  M  +GC  +++++  LI       K+ +A+ L++ M+ +
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
              P+V+ YNTL+ GL   G+L +AL++ D+MQ +  +P+  T++  IDG  K+G ++ A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
            + +  + +  C   + TY C+++ LCK      A  L  ++  +G  P+ +T +T I  
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKG 463

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           LC  G+++ A  LL  M+   C+P+  T+  LL    + NK  +   L  ++ A  L
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 206/427 (48%), Gaps = 22/427 (5%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  +  L+  + K  + +  + L   +  NG+ P++   + +IN LC  G    AF +
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 139 LGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
             ++ LR C   N  TF  LI G    G++ EA  L+K +    C+PNVV +NTLI+GLC
Sbjct: 302 FAQMFLRGC-DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
              +   AL++ ++M     + C P+V TY+ +IDG  K G +  A E   +M      P
Sbjct: 361 SNGSLEEALQVCDQMQR---SGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV+TY  ++   C    + +A  L  +M   G  P+ +TFN  I   C +G+++   +LL
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLL 477

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M   G  P+  TYN L+D    + +   A  LF  + ++  + ++ +YN ++    + 
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFT 436
             + +A+ L+ + L     P  ITYNT++    + G +  A +L++++  + +  PD  T
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIIT 597

Query: 437 FATYIDGLCKNGFVLEAVQVF--QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           + + I G C N   +E    F  +AI    C     T+N L+   C           F  
Sbjct: 598 YTSLIWGAC-NWMNIEEAMAFLDKAINQGICP-NFATWNALVR--C----------FFDS 643

Query: 495 LQHKGPI 501
           L H GPI
Sbjct: 644 LGHMGPI 650



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 204/448 (45%), Gaps = 79/448 (17%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           F  +ING  R  +   ALK+F   + EFG  CKP V  YN ++D L            L 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYR-IGEFG--CKPTVRIYNHLLDAL------------LS 156

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           + K + INP                       L+  M  +G+ P+V T+N ++   CK+ 
Sbjct: 157 ENKFQMINP-----------------------LYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++D  ++L   M  +G  PD VTY +++   C  G+I  AREL     +   +  V  YN
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYN 248

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI+  CK+ ++E A+ L  EM+   + P+V++Y+ +++ L   GN+  A  L  +M L 
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
               +  TF   I G    G + EA+ +++ +    CE  +  YN LI+GLC  G L+ A
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIH--------------W--------------------- 513
            ++  ++Q  G +P+V T S +I               W                     
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           LCK    D+AN L+  M  + C P+ +TF T ++G   N +    + LL +M      + 
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHG-CLP 487

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +++  ++++D L +  KY E    F+ +
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEI 515



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 189/373 (50%), Gaps = 10/373 (2%)

Query: 183 DPN---VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
           DPN   ++  + ++  L   RN    L  F  + N      +    TY  +I+ L ++  
Sbjct: 32  DPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAF--QHTASTYRVMIERLGRECE 89

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D  + +L QMK   IN     +  +I G+  V   ++A  +F  + + G +P V  +N 
Sbjct: 90  MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +++    + K   +N L   M + G+ P+  TYN L+   C   R+  A +LFV M +KG
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  D  +Y  ++++ CK  K++DA    RE L+ R +PSV  YN L+ G+ + G +  A+
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDA----RE-LAGRFKPSVPVYNALIDGMCKEGRIEVAI 264

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           KL+ +M  N V P+  +++  I+ LC +G V  A  +F  +    C+  I T+  LI G 
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
              G+L  A  L+  +   G  P+VV  +T+IH LC  G +++A  +   M+   C+P+ 
Sbjct: 325 FMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384

Query: 540 VTFCTLLRGFVQN 552
            T+  L+ GF ++
Sbjct: 385 TTYSILIDGFAKS 397



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 157/309 (50%), Gaps = 4/309 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  MI+    P + ++  L+  L  N   +  + +  ++  +G  P++   ++LI
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +   K G   GA     R++     PN VT+  +++ LC      +A  L +K+ +  C 
Sbjct: 392 DGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCT 451

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN +TFNT I GLC       A+KL E M    G  C P++ TYN ++D L +    ++A
Sbjct: 452 PNTMTFNTFIKGLCGNGRVEWAMKLLERMQ---GHGCLPNITTYNELLDALFRMNKYEEA 508

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L  +++ RN+ PN++TYN+++ GF       EA  LF + +  G  PD +T+N MI+ 
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568

Query: 304 NCKDGKMDKVNRLLE-LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
            CK GK+    +L+E +   +  +PD +TY SL+ G C    I  A       +++G   
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628

Query: 363 DVYSYNILI 371
           +  ++N L+
Sbjct: 629 NFATWNALV 637



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 147/283 (51%), Gaps = 6/283 (2%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N +  EA+   D M +    P +T+++IL+   AK+         + R+ S+G  P++  
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
              +++ LCK  +   A  ++ ++     TPNT+TFN  I GLC  GR+  A +L +++ 
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 481

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C PN+ T+N L++ L R      A  LF+E+        +P++VTYN+++ G  + G
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE---ARNLQPNLVTYNTVLYGFSRAG 538

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN--GVQPDVVT 296
            + +A +L  +   R   P+ ITYN++I  +C     K A  L +E + +     PD++T
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL-VERVSSMKEWHPDIIT 597

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
           + ++I   C    +++    L+  I +G+ P+  T+N+L+  F
Sbjct: 598 YTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 78/163 (47%)

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
           S   + +  TY  ++  L +   +     ++ +M+++ +      F   I+G  + G   
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A+++F  I    C+  +  YN L++ L    + +    L+  ++  G IP+V T + ++
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             LCK  ++D A+ L ++M  K C P  VT+ T++    +  K
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 145/452 (32%), Positives = 244/452 (53%), Gaps = 4/452 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           NTV++N +++ LC  G++ EA  L  ++      P+VV+++ +++G C+       LKL 
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           EE+  +     KP+  TYNSII  LCK G V +A+++L  MK++ I P+ + Y +LI GF
Sbjct: 311 EELQRKG---LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGF 367

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
               +      LF EM    + PD VT+ +MI+  C+ GK+ +  +L   M+ +G+ PD 
Sbjct: 368 GKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDE 427

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTY +L+DG+C  G +  A  L   MV KG   +V +Y  L++  CK  +V+ A  L  E
Sbjct: 428 VTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHE 487

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M  + ++P+V TYN L++GL +VGN+  A+KL+++M L    PD+ T+ T +D  CK G 
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A ++ + + +   +  I T+N L+NG C  G L+   +L   +  KG +P+  T ++
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           ++   C    M    ++   M A+  VP   T+  L++G  +  +  K    LHK   EK
Sbjct: 608 LMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCK-ARNMKEAWFLHKEMVEK 666

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                 +  + ++    K KK+ E    F  +
Sbjct: 667 GFSLTAASYNSLIKGFYKRKKFEEARKLFEEM 698



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/425 (32%), Positives = 229/425 (53%), Gaps = 3/425 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+++++    + +Q   V+ L + L   GL P+ +  N +I+ LCK G    A  V
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +      P+ V +  LI+G    G +    +LF ++      P+ VT+ ++I+GLC+
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQ 404

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
               + A KLF EM+++     KPD VTY ++IDG CK G + +A  L  QM ++ + PN
Sbjct: 405 AGKVVEARKLFSEMLSKG---LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPN 461

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+TY +L+ G C   +   A  L  EM + G+QP+V T+NA+IN  CK G +++  +L+E
Sbjct: 462 VVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLME 521

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M   G  PDT+TY ++MD +C +G +++A EL   M+ KG +  + ++N+L+N  C   
Sbjct: 522 EMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSG 581

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +ED   L + ML + I P+  T+N+L+       N+   +++   M    VVPD+ T+ 
Sbjct: 582 MLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYN 641

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I G CK   + EA  + + +      L   +YN LI G  K  + + A KLF  ++  
Sbjct: 642 ILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTH 701

Query: 499 GPIPD 503
           G I +
Sbjct: 702 GFIAE 706



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 243/460 (52%), Gaps = 3/460 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+ I+L +L +  +     SL  ++   G  PD+   +++++  C++        ++  +
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
            R    PN  T+N +I+ LC  GR++EA ++ + +      P+ V + TLI+G  ++ N 
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            V  KLF+EM  +      PD VTY S+I GLC+ G V +A++L  +M  + + P+ +TY
Sbjct: 374 SVEYKLFDEMKRK---KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            +LI G+C   + KEA  L  +M++ G+ P+VVT+ A+++  CK G++D  N LL  M +
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +G+ P+  TYN+L++G C VG I +A +L   M   G   D  +Y  +++A CK  ++  
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L R ML + ++P+++T+N L++G    G L D  +LI  M    ++P++ TF + + 
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK 610

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
             C    +   +++++ +          TYN LI G CK   +K A  L   +  KG   
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSL 670

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
              + +++I    K  + ++A  L  +M     +  +  +
Sbjct: 671 TAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIY 710



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 223/404 (55%), Gaps = 4/404 (0%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL-VA 205
           +  + + F+     L   G ++EA +LF KL  +    +V + N  +  L  + + +  A
Sbjct: 177 WGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTA 236

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
            ++F E  +E G +C  + V+YN I+  LC+ G V +A  LL+QM+ R   P+V++Y+ +
Sbjct: 237 FRVFREY-SEVG-VCW-NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVI 293

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + G+C V+   +   L  E+   G++P+  T+N++I++ CK G++ +  ++L +M  + +
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI 353

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD V Y +L+ GF   G +S   +LF  M  K    D  +Y  +I+  C+  KV +A  
Sbjct: 354 FPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARK 413

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L+ EMLS+ ++P  +TY  L+ G  + G + +A  L ++M    + P+  T+   +DGLC
Sbjct: 414 LFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLC 473

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G V  A ++   +     +  + TYN LINGLCK+G ++ A KL   +   G  PD +
Sbjct: 474 KCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTI 533

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           T +T++   CK G+M KA++LL  M  K   P+ VTF  L+ GF
Sbjct: 534 TYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGF 577



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 206/399 (51%), Gaps = 3/399 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  +++ L K  +      + + + +  +FPD  V   LI+   K G  S  + +
Sbjct: 320 PNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL 379

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              + R    P+ VT+  +I+GLC  G+++EA +LF ++      P+ VT+  LI+G C+
Sbjct: 380 FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCK 439

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  L  +MV +      P+VVTY +++DGLCK G VD A ELL +M ++ + PN
Sbjct: 440 AGEMKEAFSLHNQMVEKG---LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TYN+LI G C V + ++A  L  EM   G  PD +T+  +++  CK G+M K + LL 
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLR 556

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           +M+ +G+ P  VT+N LM+GFC+ G +     L   M+ KG   +  ++N L+   C   
Sbjct: 557 IMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRN 616

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +   + +Y+ M ++ + P   TYN L+ G  +  N+ +A  L  +M        + ++ 
Sbjct: 617 NMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYN 676

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           + I G  K     EA ++F+ +R        E Y+  ++
Sbjct: 677 SLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVD 715



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 198/408 (48%), Gaps = 9/408 (2%)

Query: 21  NFWCSFGRPPNPKTDL----SSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           +F C  GR    +  L    +   F D       ++   KSGN++    +  FD M + K
Sbjct: 330 SFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL--FDEMKRKK 387

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
             P   ++T ++  L +  +      LF  + S GL PD      LI+  CK G    AF
Sbjct: 388 IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAF 447

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  +++    TPN VT+  L++GLC  G +  A  L  +++     PNV T+N LINGL
Sbjct: 448 SLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGL 507

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+  N   A+KL EEM  +      PD +TY +I+D  CK G + KA ELL  M D+ + 
Sbjct: 508 CKVGNIEQAVKLMEEM--DLAGFF-PDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQ 564

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P ++T+N L+ GFC     ++ + L   M+D G+ P+  TFN+++   C    M     +
Sbjct: 565 PTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEI 624

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
            + M  +GV PDT TYN L+ G C    +  A  L   MV KG      SYN LI    K
Sbjct: 625 YKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYK 684

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +K E+A  L+ EM +         Y+  +   ++ GN  + L+L D+
Sbjct: 685 RKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDE 732



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 155/296 (52%), Gaps = 3/296 (1%)

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINY--NCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           EA  LF ++++ GV   V + N  +    N  DG +    R+     + GV  +TV+YN 
Sbjct: 199 EAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDG-IRTAFRVFREYSEVGVCWNTVSYNI 257

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           ++   C +G++  A  L + M  +G   DV SY+++++  C+ +++   + L  E+  + 
Sbjct: 258 ILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKG 317

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           ++P+  TYN+++S L + G + +A +++  M+   + PD+  + T I G  K+G V    
Sbjct: 318 LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEY 377

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           ++F  ++  K      TY  +I+GLC+ G++  A KLF  +  KG  PD VT + +I   
Sbjct: 378 KLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGY 437

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           CK G+M +A  L   M  K   P+ VT+  L+ G  +  +      LLH+M+ + L
Sbjct: 438 CKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGL 493



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 82/164 (50%), Gaps = 2/164 (1%)

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC-KMGRLKTACKLFHRL 495
           F  +   L + G +LEA ++F  + N    + +++ N  +  L      ++TA ++F   
Sbjct: 184 FDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREY 243

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G   + V+ + ++H LC+ G++ +A+ LL+ ME +  VP  V++  ++ G+ Q  + 
Sbjct: 244 SEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQL 303

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
            KV+ L+ ++  + L  +  + +S ++  L K  +  E     R
Sbjct: 304 GKVLKLMEELQRKGLKPNQYTYNS-IISFLCKTGRVVEAEQVLR 346


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 268/520 (51%), Gaps = 34/520 (6%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  +  M++ +  P   +F +    L +  +    ++L + +  +G  PD  +   +I
Sbjct: 163 DALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVI 222

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L   G  + A  +L  +L      +  TFN ++ GLC  G + EAARL  ++ +  C 
Sbjct: 223 HALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCT 282

Query: 184 PNVVTFNTLINGLCRTR--------------------NTLV-----------ALKLFEEM 212
           P+VVT+  L+ GLCRTR                    NT++           A +L+E M
Sbjct: 283 PSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMM 342

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
            ++    C PDV TYN ++ GLCK G    A  +L +M+++   PN++TY++L+  FC  
Sbjct: 343 GSKG---CPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRN 399

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
             W +A+ +  +M   G   +   +N +I    KDGK+D+  RL++ M  +G  PD  TY
Sbjct: 400 GMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTY 459

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N+++   C   ++  A  +F +++ +G   +  +YN LI+A     + ++ + L  EM+ 
Sbjct: 460 NTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVL 519

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
                 V++YN L+  L + GN+  ++ L+++M    + P++F++   I+ LCK G V +
Sbjct: 520 HGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRD 579

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A+++ + + N      I TYN LINGLCK+G    A  L  +L ++   PD+VT + +I 
Sbjct: 580 ALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 639

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           W CK   +D A+ LL    +   VP+E T+  +++ FV+ 
Sbjct: 640 WHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 8/459 (1%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R   TP+  ++N +++ L       +A  L++++      P   TF      LCR     
Sbjct: 138 RFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAR 197

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            AL L   M       C PD V Y ++I  L   G V +A  LL +M       +V T+N
Sbjct: 198 DALALLRGMARHG---CVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFN 254

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            ++ G C +   +EA  L   MM +G  P VVT+  ++   C+  + D+       M+ R
Sbjct: 255 DVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEA----YAMLGR 310

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
               + V  N+++ G    G+++RA EL+  M SKGC  DV++YNIL++  CK  +   A
Sbjct: 311 VPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSA 370

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           V +  EM  +   P+++TY+TLL    + G   DA  ++D+M       +S  +   I  
Sbjct: 371 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYA 430

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           L K+G + EA+++ Q +++  C+  I TYN +I  LC   ++  A  +F  L  +G + +
Sbjct: 431 LGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVAN 490

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            +T +T+IH L   G+  +   L  +M    C    V++  L++   +     + ++LL 
Sbjct: 491 GITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLE 550

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +M  + +  ++ S  + +++ L K  K R+ L   + +L
Sbjct: 551 EMMTKGIKPNNFSY-NMLINELCKAGKVRDALELSKEML 588



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 3/215 (1%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           H   N   +EA + F  +++        ++  L+  L  + ++   + L   +  +G   
Sbjct: 465 HLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPL 524

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D+   N LI  LCK G    + ++L  ++     PN  ++N LIN LC  G++ +A  L 
Sbjct: 525 DVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELS 584

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           K++      P++VT+NTLINGLC+   T  AL L E++ NE      PD+VTYN +I   
Sbjct: 585 KEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN---VHPDIVTYNILISWH 641

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           CK   +D A  LL +     I PN  T+  ++  F
Sbjct: 642 CKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNF 676


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 163/517 (31%), Positives = 260/517 (50%), Gaps = 8/517 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN   + G +   + VY    M++ K  P + ++  ++    K    +        +  
Sbjct: 189 LLNSLARFGLVDEMKQVYME--MLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVE 246

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIM 168
            GL PD F    LI   C+      AF V   + L+ C   N V +  LI+GLC E RI 
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGC-RRNEVAYTHLIHGLCVERRID 305

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           EA  LF K+    C P V T+  LI  LC +     AL L +EM  E G   KP++ TY 
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEM-EEKGI--KPNIHTYT 362

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +ID LC    ++KA+ELL QM ++ + PNVITYN+LI G+C     ++A  +   M   
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR 422

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
            ++P+  T+N +I   CK   + K   +L  M++R V PD VTYNSL+DG C  G    A
Sbjct: 423 NLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
             L   M  +G   D ++Y  +I++ CK ++VE+A  L+  +  + + P+V+ Y  L+ G
Sbjct: 482 YRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDG 541

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             + G + +A  +++KM   + +P+S TF   I GLC +G + EA  + + +     +  
Sbjct: 542 YCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPT 601

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + T   LI+ L K G    A + F ++   G  PD  T +T I   C+EG++  A D++ 
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVA 661

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            M+     P   T+ +L++G+    + +   V+L +M
Sbjct: 662 KMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM 698



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 156/516 (30%), Positives = 255/516 (49%), Gaps = 29/516 (5%)

Query: 69  FDCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
            D  +KMK     P + ++T+L+  L  +++    ++L K +   G+ P++    +LI+ 
Sbjct: 308 MDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDS 367

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           LC       A  +LG++L     PN +T+N LING C  G I +A  + + +      PN
Sbjct: 368 LCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPN 427

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
             T+N LI G C+ RN   A+ +  +M+        PDVVTYNS+IDG C+ G  D A  
Sbjct: 428 TRTYNELIKGYCK-RNVHKAMGVLNKMLER---KVLPDVVTYNSLIDGQCRSGNFDSAYR 483

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           LL  M DR + P+  TY S+I   C     +EA  LF  +    V P+VV + A+I+  C
Sbjct: 484 LLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYC 543

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           K GK+++ + +LE M+ +   P+++T+N+L+ G C  G++  A  L   MV    +  V 
Sbjct: 544 KAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVS 603

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +  ILI+   KD   + A   +++MLS   +P   TY T +    + G L DA  ++ KM
Sbjct: 604 TDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKM 663

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM--G 483
           + N V PD FT+++ I G    G    A  V + + +  CE    T+  LI  L +M  G
Sbjct: 664 KENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYG 723

Query: 484 RLKTA----------------CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           ++K                   +L  ++   G  P+  +   ++  +C+ G +  A  + 
Sbjct: 724 KVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVF 783

Query: 528 LDMEAKNCV-PSEVTFCTLLR---GFVQNNKKSKVV 559
             M+ K  + PSE+ F  LL       ++N+ +KVV
Sbjct: 784 DHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVV 819



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 248/476 (52%), Gaps = 19/476 (3%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +L LLIN     G     F +   +++SC   ++V     +  LC +    E+  L  KL
Sbjct: 129 LLTLLIN----NGYVGVVFKIRLLMIKSC---DSVADTLFVLDLCRKMNKDESFELKYKL 181

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
            +  C      +NTL+N L R        +++ EM+ +   +C P++ TYN +++G CK 
Sbjct: 182 -IIGC------YNTLLNSLARFGLVDEMKQVYMEMLED--KVC-PNIYTYNKMVNGYCKV 231

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G V++A + +  + +  ++P+  TY SLI G+C   D   A  +F EM   G + + V +
Sbjct: 232 GNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAY 291

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
             +I+  C + ++D+   L   M      P   TY  L+   C   R S A  L   M  
Sbjct: 292 THLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEE 351

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           KG + ++++Y +LI++ C   K+E A  L  +ML + + P+VITYN L++G  + G + D
Sbjct: 352 KGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           AL +++ M+  ++ P++ T+   I G CK   V +A+ V   +   K    + TYN LI+
Sbjct: 412 ALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLID 470

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G C+ G   +A +L   +  +G +PD  T ++MI  LCK  ++++A DL   +E K+ +P
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIP 530

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           + V +  L+ G+ +  K ++  ++L KM ++  + + L+ ++ ++  L  D K +E
Sbjct: 531 NVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA-LIHGLCTDGKLKE 585



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 222/497 (44%), Gaps = 62/497 (12%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    ++ + +SGN  S  A      M      P   ++T ++  L K+K+ +    
Sbjct: 461 DVVTYNSLIDGQCRSGNFDS--AYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACD 518

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF  L    + P++ +   LI+  CK G  + A ++L ++L     PN++TFN LI+GLC
Sbjct: 519 LFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            +G++ EA  L +K+      P V T   LI+ L +  +   A + F++M++   +  KP
Sbjct: 579 TDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLS---SGTKP 635

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D  TY + I   C++G +  A++++ +MK+  ++P++ TY+SLI G+  +     A  + 
Sbjct: 636 DAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVL 695

Query: 283 IEMMDNGVQPDVVTFNAMINY--NCKDGKM----------------DKVNRLLELMIQRG 324
             M D G +P   TF ++I +    K GK+                D V  LLE M++ G
Sbjct: 696 KRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHG 755

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           V P+  +Y  LM G C +G +  A ++F  M  K                          
Sbjct: 756 VTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQK-------------------------- 789

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
                   E I PS + +N LLS   ++    +A K++D M     +P   +    I  L
Sbjct: 790 --------EGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRL 841

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K G       VFQ +  C        +  +I+G+ K G ++   +LF+ ++  G     
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG----- 896

Query: 505 VTCSTMIHWLCKEGQMD 521
            T S+  + L  EG  D
Sbjct: 897 CTFSSQTYSLLIEGPPD 913


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 162/550 (29%), Positives = 272/550 (49%), Gaps = 29/550 (5%)

Query: 66  VYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           V  FD + + K     + ++   L  LAK          F+++   G  PD F  ++++ 
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLR 81

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV-FACD 183
            LCK G    A  +LG++  S    N +T++ +I+G C   R+ +A  +FK ++    C 
Sbjct: 82  GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCV 141

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VVTFN+L+ GLC       A  LFE M     A C+P+V++Y++++DGLCK G +D+A
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAK---AGCEPNVISYSTLLDGLCKAGRLDEA 198

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF------ 297
             L  +M +++  P+++ Y S + G C  +   EA     +M+  G + D V F      
Sbjct: 199 CRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258

Query: 298 -----------NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
                      N MI + C+ G +D+  +  E MI R   P    +N+L+   C   R+ 
Sbjct: 259 LCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLP 318

Query: 347 RARELFVSMVSKG---CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
               LF  M S     C  ++ +YNI+++  CK +++++A  L  EM +  + P V+TY+
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            L+ GL ++G L  A  L+++M    V PDSFT A+ ++ L K G V  A+   + ++  
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                + TYN L++GLCK GR+  A     ++      PDV + + +I  LC+ GQ   A
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           + +  +M  +  +P  V + +LL G  +N  +   + LL       L   D  +   V+D
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT----SLCKPDFVMHKMVLD 554

Query: 584 LLSKDKKYRE 593
            L K  K  +
Sbjct: 555 GLCKAGKAED 564



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 228/484 (47%), Gaps = 55/484 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F+ M K    P + S++ LL  L K  + D    L++ +      PDL      
Sbjct: 161 SEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSF 220

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTF-----------------NFLINGLCAEG 165
           +  LCK    + A     +++      + V F                 N +I  LC  G
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG 280

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
            + EA + F+++      P+   FNTLI+ +C+++     + LF+ M +     C P++ 
Sbjct: 281 MLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TYN ++D LCK   +D+A+EL+ +M +  ++P+V+TY++L+ G C +     A  L  EM
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
              GV PD  T  +++N   K GK+D     LE M  RG  PD VTYN+L+DG C  GRI
Sbjct: 401 SKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRI 460

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A      MV+  C  DV+SY I+I A C+  +   A  +++EM+   + P  + Y++L
Sbjct: 461 DEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSL 520

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           L GL + G    AL+L+                     LCK  FV+              
Sbjct: 521 LDGLARNGLEDLALELLKT------------------SLCKPDFVM-------------- 548

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                 +  +++GLCK G+ + AC++  R+   G   D  T  +++  L K G++DKA  
Sbjct: 549 ------HKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQ 602

Query: 526 LLLD 529
           L+ D
Sbjct: 603 LVDD 606



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 233/473 (49%), Gaps = 26/473 (5%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V+  ++  L K+      F  LGR  +  +  +  T+N  ++ L        A   F+++
Sbjct: 7   VVGEVLRHLGKISTIVRLFDWLGR--QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P+  T++ ++ GLC+      A +L  ++  E G   K +V+TY+ +IDG CK 
Sbjct: 65  QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL-RESGV--KLNVITYSVVIDGCCKA 121

Query: 238 GFVDKAKELLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
             VD A E+   M       P+V+T+NSL+ G C  +   EA  LF  M   G +P+V++
Sbjct: 122 SRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVIS 181

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           ++ +++  CK G++D+  RL E M+++   PD V Y S + G C   R++ A +    MV
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMV 241

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDA-------VC----------LYREMLSERIRPSV 399
           +KG + D  +++ +I   CK    E+A       +C           + EM+S    PS 
Sbjct: 242 TKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSA 301

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV---PDSFTFATYIDGLCKNGFVLEAVQV 456
             +NTL+  + +   L D + L  +M+        P+  T+   +D LCK   + EA ++
Sbjct: 302 ELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQEL 361

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              + N      + TY+ L++GLCK+G+L  AC L   +  +G  PD  T +++++ L K
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK 421

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
            G++D A   L  M+A+   P  VT+ TLL G  +  +  + +  L KM A K
Sbjct: 422 AGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 135/263 (51%), Gaps = 4/263 (1%)

Query: 342 VGRISRARELFVSM-VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
           +G+IS    LF  +   KG +H V++YN  ++A  K    + A   +++M      P   
Sbjct: 15  LGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDF 74

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TY+ +L GL + G L  A +L+ +++ + V  +  T++  IDG CK   V +A+++F+ +
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 461 RNCK-CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
            +   C   + T+N L+ GLC   R+  A  LF  +   G  P+V++ ST++  LCK G+
Sbjct: 135 SSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +D+A  L  +M  K+CVP  V + + + G  + N+ ++      KM   K   +D    S
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT-KGSKADAVAFS 253

Query: 580 KVVDLLSKDKKYRECLNQ-FRHL 601
            V+ +L K     E  NQ   HL
Sbjct: 254 TVIGILCKKGHAEEAQNQMIEHL 276


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 163/568 (28%), Positives = 274/568 (48%), Gaps = 35/568 (6%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+  F+ M     +P    +  +L +L K   Y + V +F +L    + PD     + ++
Sbjct: 236 ALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVH 295

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
              + G    A   +  +++S   P   TF  LI+ L   G I EA + F  +    C P
Sbjct: 296 SFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSP 355

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           NVVT+ TL+NGL +      A ++F EM       C PD + YN++IDGL K G  D A 
Sbjct: 356 NVVTYTTLVNGLAKAGRLEEACEVFVEMKENN---CSPDAIAYNTLIDGLGKAGEADMAC 412

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            L  +MKDR + PN+ TYN +I          EA  LF ++ + G  PDV T+N +I+  
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472

Query: 305 CKDGKMDKVNRLLELMIQRG----VNPDT---------------------------VTYN 333
            K G+MDKV  +++ M+++G    ++ D+                           +TYN
Sbjct: 473 GKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYN 532

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +LM  F   G +  A +L   M    C   V +Y  L++   K  ++++AV L REM  +
Sbjct: 533 TLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQ 592

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
              PSV+TY++L++  ++     ++L L D+M     V D  T++  I+ LCK+  V +A
Sbjct: 593 GCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQA 652

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           + VF  ++    E  +  Y  L++ L K  ++  A ++F+ LQ    +PD    + M++ 
Sbjct: 653 LDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNG 712

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           L K  ++D+A  L+  M+ +N +P   T+ +LL G  ++ +  +   +  KM  E     
Sbjct: 713 LVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGH-EP 771

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           D+   + ++D+L K  K    L  FR +
Sbjct: 772 DVVAYTSLMDVLGKGGKLSHALIIFRAM 799



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 262/503 (52%), Gaps = 9/503 (1%)

Query: 45   TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
            T ++ F+++ H       +EAV   + M K +  P + ++T L+  L K  + D  VSL 
Sbjct: 533  TLMSAFIHNGH------VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLL 586

Query: 105  KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
            + +   G  P +   + L+    K      +  +   ++R     +  T++ +IN LC  
Sbjct: 587  REMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKS 646

Query: 165  GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
              + +A  +F ++     +P +  + TL++ L +      AL++F E+     +   PD 
Sbjct: 647  DDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQE---SSLVPDT 703

Query: 225  VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
              YN +++GL K   VD+A +L+  MK++NI P++ TY SL+ G       +EA  +F +
Sbjct: 704  FVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTK 763

Query: 285  MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
            M + G +PDVV + ++++   K GK+     +   M ++   PD VTY+SL+D     GR
Sbjct: 764  MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823

Query: 345  ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
            +  A   F + +SKGC  +V  Y+ LI++  K   V+ A+ L+ EM   +  P+++TYN 
Sbjct: 824  VEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN 883

Query: 405  LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            LLSGL + G L  A KL+++M+    VPD  T+   IDG+ K G V EA   F+ ++   
Sbjct: 884  LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943

Query: 465  CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                + T+  LI  L K+ +L  AC+LF  ++ +G  P VVT + +I  L + G++ +A 
Sbjct: 944  IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAA 1003

Query: 525  DLLLDMEAKNCVPSEVTFCTLLR 547
             +  +M+ K C+P  +T   + R
Sbjct: 1004 MIFHEMKVKGCMPDGITIGIMKR 1026



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/569 (26%), Positives = 272/569 (47%), Gaps = 35/569 (6%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG------------ 111
            EA   F  + +    P + ++  L+ +L K  Q D V+++ K +   G            
Sbjct: 445  EAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAG 504

Query: 112  ------------LFPDL-------FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
                         +P L          N L++     G    A  +L  + +    P  V
Sbjct: 505  HEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVV 564

Query: 153  TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            T+  L++GL   GR+ EA  L +++    C+P+VVT+++L+    +      +L LF+EM
Sbjct: 565  TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624

Query: 213  VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
            V +    C  DV TY+ +I+ LCK   VD+A ++  +MK+  + P +  Y +L+      
Sbjct: 625  VRKG---CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKD 681

Query: 273  DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
            +    A  +F E+ ++ + PD   +N M+N   K  ++D+  +L++ M  + + PD  TY
Sbjct: 682  EKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTY 741

Query: 333  NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
             SL+DG    GR+  A  +F  M  +G   DV +Y  L++   K  K+  A+ ++R M  
Sbjct: 742  TSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK 801

Query: 393  ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
            +R  P V+TY++L+  L + G + +A    +        P+   +++ ID   K G V  
Sbjct: 802  KRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDR 861

Query: 453  AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
            A+++F+ ++  +C   I TYN L++GL K GRL  A KL   ++  G +PD+VT + +I 
Sbjct: 862  ALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILID 921

Query: 513  WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             + K G +D+A      M+ K  VP  +TF +L+    + +K  +   L   M  E    
Sbjct: 922  GVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNP 981

Query: 573  SDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            S ++ +  ++D+L +  K  E    F  +
Sbjct: 982  SVVTYNV-LIDILGRAGKVHEAAMIFHEM 1009



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 165/584 (28%), Positives = 277/584 (47%), Gaps = 39/584 (6%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K+G +   EA   F  M +   SP   ++  L+  L K  + D    LFK +  
Sbjct: 363 LVNGLAKAGRL--EEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKD 420

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            GL P+L   N++I+ L K G    A+ +   +      P+  T+N LI+ L   G++ +
Sbjct: 421 RGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDK 480

Query: 170 AARLFKKL-------------------NVFACDPNV------------VTFNTLINGLCR 198
              + K++                    +   D  V            +T+NTL++    
Sbjct: 481 VLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIH 540

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   A+KL E M       C P VVTY +++DGL K G +D+A  LL +M+ +   P+
Sbjct: 541 NGHVDEAVKLLEVMKKHE---CIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPS 597

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+TY+SL+  F   D  +E+  LF EM+  G   DV T++ +IN  CK   +D+   +  
Sbjct: 598 VVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFG 657

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M + G+ P    Y +L+       +I  A ++F  +       D + YNI++N   K  
Sbjct: 658 RMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSN 717

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +V++A  L   M ++ I P + TY +LL GL + G L +A  +  KM      PD   + 
Sbjct: 718 RVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYT 777

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +D L K G +  A+ +F+A+   +C   + TY+ LI+ L K GR++ A   F     K
Sbjct: 778 SLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISK 837

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P+V   S++I    K+G +D+A +L  +M+ + C P+ VT+  LL G  +  + +  
Sbjct: 838 GCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVA 897

Query: 559 VVLLHKMAAEKL-VVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             LL +M  EK+  V DL   + ++D + K     E  + F+ +
Sbjct: 898 EKLLEEM--EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRM 939



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 247/520 (47%), Gaps = 34/520 (6%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++T+++  LA  ++ D VV +   +   G    + +L  L+         SGA  +  ++
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P+T  +NF++  L   G    A  +F KL  F   P+  TF   ++   R+   
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A +  +EM+    +   P V T+  +ID L K G +D+A +    MK+   +PNV+TY
Sbjct: 304 DPAAEPIQEMIK---SGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTY 360

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            +L+ G       +EA  +F+EM +N   PD + +N +I+   K G+ D    L + M  
Sbjct: 361 TTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKD 420

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RG+ P+  TYN ++      GR   A +LF  +  +G   DV++YN LI+   K  +++ 
Sbjct: 421 RGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDK 480

Query: 383 AVCLYREMLSERIR------------------------PSV-------ITYNTLLSGLFQ 411
            + + +EM+ +                           PS+       ITYNTL+S    
Sbjct: 481 VLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIH 540

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G++ +A+KL++ M+ ++ +P   T+ T +DGL K G + EAV + + +    CE  + T
Sbjct: 541 NGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVT 600

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y+ L+    K  + + +  LF  +  KG + DV T S +I+ LCK   +D+A D+   M+
Sbjct: 601 YSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMK 660

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +   P    + TLL   V++ K    + + +++    LV
Sbjct: 661 EEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLV 700



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 188/409 (45%), Gaps = 32/409 (7%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V TY  +I  L      D   ++L  M       ++    SL+  F   ++   A  +F 
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFN 241

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +M   G  P    +N ++    K G       +   + Q  + PD  T+   +  F   G
Sbjct: 242 QMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSG 301

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           R+  A E    M+  G    V+++ +LI+A  K   +++A   +  M + R  P+V+TY 
Sbjct: 302 RLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYT 361

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL++GL + G L +A ++  +M+ N+  PD+  + T IDGL K G    A  +F+ +++ 
Sbjct: 362 TLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDR 421

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                + TYN +I+ L K GR   A +LFH L+ +G +PDV T +T+I  L K GQMDK 
Sbjct: 422 GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKV 481

Query: 524 NDLLLDMEAKN--CV----------------------PS-------EVTFCTLLRGFVQN 552
             ++ +M  K   C+                      PS       E+T+ TL+  F+ N
Sbjct: 482 LAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHN 541

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
               + V LL  M   + + + ++ ++ +VD L K  +  E ++  R +
Sbjct: 542 GHVDEAVKLLEVMKKHECIPTVVTYTT-LVDGLGKAGRLDEAVSLLREM 589



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 192/448 (42%), Gaps = 35/448 (7%)

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           V T+  +I  L   + T   +++   M  E   I    +    S++        V  A E
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRIS---MHLLTSLLRTFGSTNNVSGALE 238

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           +  QMK    NP+   YN ++        +  A  +F ++    +QPD  TF   ++   
Sbjct: 239 IFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFN 298

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           + G++D     ++ MI+ G++P   T+  L+D     G I  A + F  M +  C  +V 
Sbjct: 299 RSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVV 358

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y  L+N   K  ++E+A  ++ EM      P  I YNTL+ GL + G    A  L  +M
Sbjct: 359 TYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEM 418

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +   +VP+  T+   I  L K G   EA Q+F  ++       + TYN LI+ L K G++
Sbjct: 419 KDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQM 478

Query: 486 KTACKLFHRL---------------QHKGPIPDV----------------VTCSTMIHWL 514
                +   +                H+G I                   +T +T++   
Sbjct: 479 DKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAF 538

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
              G +D+A  LL  M+   C+P+ VT+ TL+ G  +  +  + V LL +M  +    S 
Sbjct: 539 IHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSV 598

Query: 575 LSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           ++ SS +     +D++  E L+ F  ++
Sbjct: 599 VTYSSLMASFYKRDQE-EESLSLFDEMV 625



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 152/330 (46%), Gaps = 2/330 (0%)

Query: 274 DWKEAKCLFI-EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           D   AKC F      +G    V T+  MI       + D V ++L  M + G        
Sbjct: 161 DLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLL 220

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
            SL+  F     +S A E+F  M S GC      YN ++    K      AV ++ ++  
Sbjct: 221 TSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQ 280

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
            RI+P   T+   +    + G L  A + I +M  + + P   TF   ID L K+G + E
Sbjct: 281 FRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDE 340

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A + F  ++N +C   + TY  L+NGL K GRL+ AC++F  ++     PD +  +T+I 
Sbjct: 341 ACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLID 400

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            L K G+ D A  L  +M+ +  VP+  T+  ++    +  ++ +   L H +  E+  V
Sbjct: 401 GLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL-KEQGAV 459

Query: 573 SDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            D+   + ++D+L K  +  + L   + ++
Sbjct: 460 PDVFTYNTLIDVLGKGGQMDKVLAIIKEMV 489


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/509 (30%), Positives = 254/509 (49%), Gaps = 4/509 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+  F  M + +  P   S   LL   AK  + D V   FK +   G  P +F  N++
Sbjct: 77  EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIM 136

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+C+CK G    A  +   +      P+TVT+N +I+G    GR+ +    F+++    C
Sbjct: 137 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 196

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+V+T+N LIN  C+     + L+ + EM    G   KP+VV+Y++++D  CK+G + +
Sbjct: 197 EPDVITYNALINCFCKFGKLPIGLEFYREMK---GNGLKPNVVSYSTLVDAFCKEGMMQQ 253

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +  + M+   + PN  TY SLI   C + +  +A  L  EM+  GV+ +VVT+ A+I+
Sbjct: 254 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 313

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   +M +   L   M   GV P+  +YN+L+ GF     + RA EL   +  +G + 
Sbjct: 314 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 373

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  Y   I   C  +K+E A  +  EM    I+ + + Y TL+   F+ GN  + L L+
Sbjct: 374 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 433

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN-CKCELRIETYNCLINGLCK 481
           D+M+  D+     TF   IDGLCKN  V +AV  F  I N    +     +  +I+GLCK
Sbjct: 434 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 493

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             +++ A  LF ++  KG +PD    ++++    K+G + +A  L   M         + 
Sbjct: 494 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 553

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           + +L+ G    N+  K    L +M  E +
Sbjct: 554 YTSLVWGLSHCNQLQKARSFLEEMIGEGI 582



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 252/507 (49%), Gaps = 4/507 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG   F  L ++L      +  +  F ++    +FP     N L++   K+G T      
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              ++ +   P   T+N +I+ +C EG +  A  LF+++      P+ VT+N++I+G  +
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                  +  FEEM +     C+PDV+TYN++I+  CK G +    E   +MK   + PN
Sbjct: 178 VGRLDDTVCFFEEMKD---MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V++Y++L+  FC     ++A   +++M   G+ P+  T+ ++I+ NCK G +    RL  
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+Q GV  + VTY +L+DG C   R+  A ELF  M + G   ++ SYN LI+   K +
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++ A+ L  E+    I+P ++ Y T + GL  +  +  A  ++++M+   +  +S  + 
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 414

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T +D   K+G   E + +   ++    E+ + T+  LI+GLCK   +  A   F+R+ + 
Sbjct: 415 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 474

Query: 499 -GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G   +    + MI  LCK+ Q++ A  L   M  K  VP    + +L+ G  +     +
Sbjct: 475 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 534

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            + L  KMA   + +  L+ +S V  L
Sbjct: 535 ALALRDKMAEIGMKLDLLAYTSLVWGL 561



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 233/459 (50%), Gaps = 3/459 (0%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R+   P    F+ L + L   G + EA + F K+  F   P   + N L++   +   T 
Sbjct: 53  RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 112

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
              + F++M+   GA  +P V TYN +ID +CK+G V+ A+ L  +MK R + P+ +TYN
Sbjct: 113 DVKRFFKDMI---GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 169

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S+I GF  V    +  C F EM D   +PDV+T+NA+IN  CK GK+         M   
Sbjct: 170 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 229

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P+ V+Y++L+D FC  G + +A + +V M   G   + Y+Y  LI+ANCK   + DA
Sbjct: 230 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 289

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EML   +  +V+TY  L+ GL     + +A +L  KM    V+P+  ++   I G
Sbjct: 290 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 349

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             K   +  A+++   ++    +  +  Y   I GLC + +++ A  + + ++  G   +
Sbjct: 350 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 409

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            +  +T++    K G   +   LL +M+  +   + VTFC L+ G  +N   SK V   +
Sbjct: 410 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 469

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +++ +  + ++ ++ + ++D L KD +       F  ++
Sbjct: 470 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV 508



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 177/379 (46%), Gaps = 39/379 (10%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S++ L+    K       +  +  +   GL P+ +    LI+  CK+G  S AF +
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 292

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +L+     N VT+  LI+GLC   R+ EA  LF K++     PN+ ++N LI+G  +
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +N   AL+L  E+    G   KPD++ Y + I GLC    ++ AK ++ +MK+  I  N
Sbjct: 353 AKNMDRALELLNELK---GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 409

Query: 259 VITYNSLI----------CGFCCVDDWKEAK--------CLFIEMM-------------- 286
            + Y +L+           G   +D+ KE          C+ I+ +              
Sbjct: 410 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 469

Query: 287 ----DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
               D G+Q +   F AMI+  CKD +++    L E M+Q+G+ PD   Y SLMDG    
Sbjct: 470 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 529

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G +  A  L   M   G + D+ +Y  L+       +++ A     EM+ E I P  +  
Sbjct: 530 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLC 589

Query: 403 NTLLSGLFQVGNLGDALKL 421
            ++L   +++G + +A++L
Sbjct: 590 ISVLKKHYELGCIDEAVEL 608


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/608 (26%), Positives = 290/608 (47%), Gaps = 77/608 (12%)

Query: 59  NITSNEAVYFFDCMIKMKP--SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           N  S  A+     M K     SP + +++ ++       +     SLF  +   G+ PD+
Sbjct: 241 NSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDV 300

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              NL+I+ LCK      A +VL ++      P+TVT++ +I+G    GR+ EAA++F++
Sbjct: 301 VTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFRE 360

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG--- 233
           +      PN+VT N+ +  LC+   +  A + F+ M  +     KPD+ +Y +++ G   
Sbjct: 361 MKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGH---KPDIFSYCTLLHGYAS 417

Query: 234 --------------------------------LCKDGFVDKAKELLLQMKDRNINPNVIT 261
                                             K G VD A  +  +M+ + ++P+V+T
Sbjct: 418 EGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT 477

Query: 262 -----------------------------------YNSLICGFCCVDDWKEAKCLFIEMM 286
                                              Y+S+I GFC      +AK L  EM+
Sbjct: 478 YSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMI 537

Query: 287 DNGV-QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           + G+ +PD+V F+++IN  CKDG++   + + +L    G  P  +T+NSL+DG+CLVG++
Sbjct: 538 NKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKM 597

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
            +A ++  +M   G   D+ +YN L++   K+ ++ D + L+REM  + ++P+ +TY  +
Sbjct: 598 DKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIM 657

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           L+GLF+ G    A K   +M  +        +   + GLC+N    EA+ +FQ +     
Sbjct: 658 LAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNV 717

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +  I   N +IN + K+ R + A +LF  +   G +P+  T   MI  L K+G ++ AN+
Sbjct: 718 KFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANN 777

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           +   ME    VP       ++R  ++  + +K    L K+  +++++ + S +S ++ L 
Sbjct: 778 MFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILL-EASTTSLMLSLF 836

Query: 586 SKDKKYRE 593
           S+  KY+E
Sbjct: 837 SRKGKYQE 844



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 156/491 (31%), Positives = 255/491 (51%), Gaps = 7/491 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF-V 137
           P   ++ IL+    + ++ D  ++LF  +   GL  D    N L+ CLC    T  A  V
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLING 195
           +L R+      PN V+++ ++  LC       A  L + +     AC P+VV ++T+I+G
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
                 T  A  LF EM  +     KPDVVTYN IID LCK   +DKA+ +L QM     
Sbjct: 275 FFNEGETGKACSLFHEMTRQG---VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGA 331

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P+ +TY+ +I G+  +   KEA  +F EM   G+ P++VT N+ +   CK G+  +   
Sbjct: 332 QPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAE 391

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
             + M  +G  PD  +Y +L+ G+   G  +    LF SM S G   + + + ILI+A  
Sbjct: 392 FFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYA 451

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K   V+DA+ ++ EM  + + P V+TY+T++S   ++G L DA++  ++M    + P++ 
Sbjct: 452 KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTA 511

Query: 436 TFATYIDGLCKNGFVLEAVQ-VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            +++ I G C +G +++A + V + I        I  ++ +IN LCK GR+  A  +F  
Sbjct: 512 VYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDL 571

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
               G  P V+T +++I   C  G+MDKA  +L  ME     P  VT+ TLL G+ +N +
Sbjct: 572 ATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGR 631

Query: 555 KSKVVVLLHKM 565
            +  + L  +M
Sbjct: 632 INDGLTLFREM 642



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 235/466 (50%), Gaps = 2/466 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S EA  FFD M      P + S+  LL   A    +  ++ LF  + SNG+  +  V  +
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTI 445

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+   K G+   A ++   + +   +P+ VT++ +I+     GR+ +A   F ++    
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARG 505

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN   ++++I G C     + A +L  EM+N+   I +PD+V ++S+I+ LCKDG V 
Sbjct: 506 IQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINK--GIPRPDIVFFSSVINSLCKDGRVM 563

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A ++     D    P VIT+NSLI G+C V    +A  +   M   GV+PD+VT+N ++
Sbjct: 564 DAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLL 623

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K+G+++    L   M ++GV P+TVTY  ++ G    GR   AR+ F  M+  G  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             V  Y I++   C++   ++A+ L++++ +  ++ S+   NT+++ +++V    +A +L
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
              +  + ++P+  T+   I  L K+G V +A  +F ++            N +I  L +
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE 803

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            G +  A     ++  K  + +  T S M+    ++G+  +   LL
Sbjct: 804 KGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 203/420 (48%), Gaps = 10/420 (2%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P   T+N L++  CR R   + L LF  ++       K D +T N+++  LC     ++A
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTG---LKMDQITANTLLKCLCYANRTEEA 211

Query: 244 KELLL-QMKDRNINPNVITYNSLICGFCCVDDWKEAKCL-FIEMM---DNGVQPDVVTFN 298
             +LL +M +    PN ++Y+ ++   C  D+    + L  ++MM        PDVV ++
Sbjct: 212 VNVLLHRMSELGCVPNAVSYSIVLKALC--DNSMSQRALDLLQMMAKQGGACSPDVVAYS 269

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I+    +G+  K   L   M ++GV PD VTYN ++D  C    + +A  +   M + 
Sbjct: 270 TVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTD 329

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G + D  +Y+ +I+      ++++A  ++REM    + P+++T N+ L+ L + G   +A
Sbjct: 330 GAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEA 389

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            +  D M      PD F++ T + G    G   + + +F ++++         +  LI+ 
Sbjct: 390 AEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHA 449

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
             K G +  A  +F  +Q +G  PDVVT ST+I    + G++  A +    M A+   P+
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPN 509

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
              + ++++GF  +    K   L+ +M  + +   D+   S V++ L KD +  +  + F
Sbjct: 510 TAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 189/398 (47%), Gaps = 4/398 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M +   SP + +++ +++  ++  +    +  F ++ + G+ P+  V + +
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSI 516

Query: 123 INCLC-KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I   C   G+     +V   I +    P+ V F+ +IN LC +GR+M+A  +F       
Sbjct: 517 IQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIG 576

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P V+TFN+LI+G C       A K+ + M  E   + +PD+VTYN+++DG  K+G ++
Sbjct: 577 ERPGVITFNSLIDGYCLVGKMDKAFKILDAM--EVVGV-EPDIVTYNTLLDGYFKNGRIN 633

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
               L  +M+ + + PN +TY  ++ G         A+  F EM+++G    V  +  ++
Sbjct: 634 DGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIIL 693

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C++   D+   L + +    V       N++++    V R   A+ELF ++ + G  
Sbjct: 694 GGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLL 753

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  +Y ++I    KD  VEDA  ++  M    I P     N ++  L + G +  A   
Sbjct: 754 PNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNY 813

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           + K+    ++ ++ T +  +    + G   E +++  A
Sbjct: 814 LSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLLPA 851


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 266/507 (52%), Gaps = 6/507 (1%)

Query: 73  IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
           + +KP P   ++  L+    +    +    +   + + G+  +L + N L+N +CK G  
Sbjct: 305 VGLKPEP--ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM 362

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
             A  ++  ++     P++ T++ LI G C    +  A  L  ++      P V+T++ +
Sbjct: 363 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 422

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           INGLCR  N      +  EMV       KP+ V Y +++    K+G V++++ +L +M++
Sbjct: 423 INGLCRCGNLQGTNAILREMVMNG---LKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 479

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           + I P+V  YNSLI GFC     +EA+   +EM++  ++P+  T+ A I+   K G+M+ 
Sbjct: 480 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 539

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
            +R    M+  GV P+   Y +L++G C  G ++ A  +F  ++S+    DV +Y++LI+
Sbjct: 540 ADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIH 599

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
              ++ K+ +A  ++ E+  + + P+  TYN+L+SG  + GN+  A +L+++M +  + P
Sbjct: 600 GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 659

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D  T+   IDGLCK G +  A  +F  I          TY  +++G CK      A +L 
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 719

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +  +G  PD    + ++++ CKE + +KA DL  +M  K    S V+F TL+ G+ ++
Sbjct: 720 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKS 778

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            K  +   LL +M  ++ + + ++ +S
Sbjct: 779 GKLQEANHLLEEMIEKQFIPNHVTYTS 805



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 255/503 (50%), Gaps = 20/503 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV  F      +  P + S   LL  L K  + +    +F  + ++ + PD++    +I
Sbjct: 172 EAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMI 231

Query: 124 NCLCKMGITSGAFVVL------GRILRSC-----------FTPNTVTFNFLINGLCAEGR 166
           +  CK+G    A  VL       R+L                P+  T++ LING C E R
Sbjct: 232 SAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKR 291

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
             EA  +  ++      P  +T+N LI+G  R  +   A ++ +EMV       + +++ 
Sbjct: 292 SREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV---ACGIEANLII 348

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           +N++++G+CK G ++KA E++ +M ++ + P+  TY+ LI G C   +   A  L  EM 
Sbjct: 349 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 408

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
              + P V+T++ +IN  C+ G +   N +L  M+  G+ P+ V Y +LM      GR+ 
Sbjct: 409 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 468

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            +R +   M  +G   DV+ YN LI   CK +++E+A     EML  R+RP+  TY   +
Sbjct: 469 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 528

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            G  + G +  A +  ++M    V+P+   +   I+G CK G V EA  VF+ I + +  
Sbjct: 529 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVL 588

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             ++TY+ LI+GL + G++  A  +F  LQ KG +P+  T +++I   CK+G +DKA+ L
Sbjct: 589 QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQL 648

Query: 527 LLDMEAKNCVPSEVTFCTLLRGF 549
           L +M  K   P  VT+  L+ G 
Sbjct: 649 LEEMCIKGINPDIVTYNILIDGL 671



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 259/521 (49%), Gaps = 6/521 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN   K+G +   +A+     M++    P   ++++L+    + +       L   +  
Sbjct: 352 LLNGVCKAGKM--EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 409

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
             L P +   +++IN LC+ G   G   +L  ++ +   PN V +  L+     EGR+ E
Sbjct: 410 RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEE 469

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           +  + +++      P+V  +N+LI G C+ +    A     EM+       +P+  TY +
Sbjct: 470 SRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR---LRPNAHTYGA 526

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
            IDG  K G ++ A     +M    + PNV  Y +LI G C   +  EA  +F  ++   
Sbjct: 527 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 586

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           V  DV T++ +I+   ++GKM +   +   + ++G+ P+  TYNSL+ G C  G + +A 
Sbjct: 587 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 646

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   M  KG   D+ +YNILI+  CK  ++E A  L+ ++    + P+ +TY  ++ G 
Sbjct: 647 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 706

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            +  N   A +L+++M L  V PD+F +   ++  CK     +A+ +FQ +   K     
Sbjct: 707 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE-KGFAST 765

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            ++N LI G CK G+L+ A  L   +  K  IP+ VT +++I   CK G M +A  L L+
Sbjct: 766 VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLE 825

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           M+ +N +P+  T+ +LL G+      S+V  L  +M A+ +
Sbjct: 826 MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGI 866



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 245/503 (48%), Gaps = 33/503 (6%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA  +   M++ +  P   ++   +   +K  + +     F  + S G+ P++ +   LI
Sbjct: 504 EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 563

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CK G  + AF V   IL      +  T++ LI+GL   G++ EA  +F +L      
Sbjct: 564 EGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL 623

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T+N+LI+G C+  N   A +L EEM  +      PD+VTYN +IDGLCK G +++A
Sbjct: 624 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG---INPDIVTYNILIDGLCKAGEIERA 680

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K L   ++ R + PN +TY +++ G+C   +   A  L  EM+  GV PD   +N ++N+
Sbjct: 681 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 740

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK+ K +K   L + M+++G    TV++N+L++G+C  G++  A  L   M+ K    +
Sbjct: 741 CCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPN 799

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y  LI+ NCK   + +A  L+ EM    + P+  TY +LL G   +GN+ +   L +
Sbjct: 800 HVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFE 859

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M    + PD  T+   ID  C+ G V+EA           C+L+ E    L+ G+    
Sbjct: 860 EMVAKGIEPDKMTYYVMIDAYCREGNVMEA-----------CKLKDEI---LVKGM---- 901

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +K+  +L            + TCS +       G MD+A ++L  M     V +  +  
Sbjct: 902 PMKSGFRL-----------GLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLG 950

Query: 544 TLLRGFVQNNKKSKVVVLLHKMA 566
            L+ G            LL +MA
Sbjct: 951 DLVDGNQNGANSEDSDNLLKQMA 973



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 202/394 (51%), Gaps = 12/394 (3%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+T  EA   F  ++  +    + ++++L+  L++N +      +F  L   GL P+
Sbjct: 568 KEGNVT--EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 625

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            F  N LI+  CK G    A  +L  +      P+ VT+N LI+GLC  G I  A  LF 
Sbjct: 626 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFD 685

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      PN VT+  +++G C+++N   A +L EEM+        PD   YN I++  C
Sbjct: 686 DIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG---VPPDAFIYNVILNFCC 742

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+   +KA +L  +M ++    + +++N+LI G+C     +EA  L  EM++    P+ V
Sbjct: 743 KEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 801

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+ ++I++NCK G M +  RL   M +R V P   TY SL+ G+  +G +S    LF  M
Sbjct: 802 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 861

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI------RPSVITYNTLLSGL 409
           V+KG   D  +Y ++I+A C++  V +A  L  E+L + +      R  + T + +  G 
Sbjct: 862 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGF 921

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
              GN+ +A +++  M     V ++ +    +DG
Sbjct: 922 QIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 253/534 (47%), Gaps = 50/534 (9%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P+  + ++L++   KMG    A  V        F P+ ++ N L+  L    ++    ++
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK------------ 221
           F  +      P+V T+  +I+  C+  N   A ++  EM  +   + +            
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 222 --PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             PD+ TY+ +I+G C +    +AK +LL+M D  + P  ITYN+LI GF    D ++A 
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            +  EM+  G++ +++ +N ++N  CK GKM+K   +++ M+++GV PD+ TY+ L++G 
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 391

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C    ++RA EL   M  +     V +Y+++IN  C+   ++    + REM+   ++P+ 
Sbjct: 392 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 451

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF------------------------ 435
           + Y TL++   + G + ++  ++++M+   ++PD F                        
Sbjct: 452 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 511

Query: 436 -----------TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
                      T+  +IDG  K G +  A + F  + +C     +  Y  LI G CK G 
Sbjct: 512 MLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGN 571

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +  A  +F  +  +  + DV T S +IH L + G+M +A  +  +++ K  +P+  T+ +
Sbjct: 572 VTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNS 631

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           L+ G  +     K   LL +M   K +  D+   + ++D L K  +     N F
Sbjct: 632 LISGSCKQGNVDKASQLLEEMCI-KGINPDIVTYNILIDGLCKAGEIERAKNLF 684



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 199/381 (52%), Gaps = 8/381 (2%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           +   F++   K+G +    A  +F+ M+     P +  +T L+    K        S+F+
Sbjct: 523 TYGAFIDGYSKAGEMEI--ADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 580

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            + S  +  D+   ++LI+ L + G    AF +   +      PN  T+N LI+G C +G
Sbjct: 581 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 640

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
            + +A++L +++ +   +P++VT+N LI+GLC+      A  LF+++    G    P+ V
Sbjct: 641 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE---GRGLTPNCV 697

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD-WKEAKCLFIE 284
           TY +++DG CK      A +LL +M  R + P+   YN +I  FCC ++ +++A  LF E
Sbjct: 698 TYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN-VILNFCCKEEKFEKALDLFQE 756

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M++ G     V+FN +I   CK GK+ + N LLE MI++   P+ VTY SL+D  C  G 
Sbjct: 757 MLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 815

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A+ L++ M  +       +Y  L++       + +   L+ EM+++ I P  +TY  
Sbjct: 816 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYV 875

Query: 405 LLSGLFQVGNLGDALKLIDKM 425
           ++    + GN+ +A KL D++
Sbjct: 876 MIDAYCREGNVMEACKLKDEI 896



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 189/385 (49%), Gaps = 27/385 (7%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD----WKE 277
           P+ V ++ ++D   K GF+ +A  + L  K+    P++++ NSL+      +     WK 
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK- 210

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
              +F  M  + V PDV T+  MI+ +CK G +    R+L  M ++           L+D
Sbjct: 211 ---VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKA---------RLLD 258

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
                     A EL  SMV KG   D+Y+Y+ILIN  C +++  +A  +  EM+   ++P
Sbjct: 259 ---------EAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP 309

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
             ITYN L+ G  + G++  A ++ D+M    +  +   + T ++G+CK G + +A+++ 
Sbjct: 310 EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIM 369

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           Q +     E   +TY+ LI G C+   +  A +L   ++ +   P V+T S +I+ LC+ 
Sbjct: 370 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 429

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G +   N +L +M      P+ V + TL+    +  +  +  ++L +M  E+ ++ D+  
Sbjct: 430 GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM-REQGILPDVFC 488

Query: 578 SSKVVDLLSKDKKYRECLNQFRHLL 602
            + ++    K K+  E       +L
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEML 513


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 162/530 (30%), Positives = 269/530 (50%), Gaps = 19/530 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLN---SNGLFPDLFVL 119
            EA    D +  ++ +    S+  +LT L +   +D   +L + ++        P+    
Sbjct: 62  GEATSLLDALPSVRDA---VSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSY 118

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
            +L+  LC   +   A  +L  +  +    + VT+  LI GLC    + +A  L  ++  
Sbjct: 119 TVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE 178

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
              +PNVV +++L+ G C++       K+F EM +E G   +PDVV Y  +ID LCK G 
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM-SEKG--IEPDVVMYTGLIDSLCKVGK 235

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
             KA  ++  M  R + PNV+TYN LI   C     KEA  +  +M + GV PDVVT+N 
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295

Query: 300 MINYNCKDGKMDKVNRLLELMIQRG---VNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +I       +MD+   LLE M+ RG   V P+ VT+NS++ G C +GR+ +A ++   M 
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             GC  ++ +YN+LI    +  KV  A+ L  EM S  + P   TY+ L+ G  ++  + 
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A  L+  M+   + P+ F +   +  +C+ G +  A  +F  + N    L +  Y+ +I
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMI 473

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G CK G LKTA +L   +  +G  PD VT S +I+   K G M+ AN +L  M A   +
Sbjct: 474 HGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFL 533

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           P    F +L++G+    + +KV+ L+ +M     +  +++L SK++  LS
Sbjct: 534 PDVAVFDSLIQGYSTKGEINKVLELIREM-----ITKNIALDSKIISTLS 578



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 249/492 (50%), Gaps = 6/492 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   S+T+L+  L  ++  D  V L + + S G+  D+     LI  LC       A  +
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +G +  S   PN V ++ L+ G C  GR  +  ++F +++    +P+VV +  LI+ LC+
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  + + MV       +P+VVTYN +I+ +CK+G V +A  +L +M ++ + P+
Sbjct: 233 VGKAKKAHGVMDMMVRRG---LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMM--DNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           V+TYN+LI G   V +  EA  L  EM+   N V+P+VVTFN++I   C  G+M +  ++
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
             +M + G   + VTYN L+ G   V ++ +A EL   M S G   D ++Y+ILI   CK
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             +V+ A  L   M    I P +  Y  LL  + + G +  A  L ++M  N+   D   
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVA 468

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++T I G CK G +  A ++ ++I +        TY+ +IN   K G ++ A  +  ++ 
Sbjct: 469 YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMT 528

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G +PDV    ++I     +G+++K  +L+ +M  KN         TL    V +N+  
Sbjct: 529 ASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGK 588

Query: 557 KVVVLLHKMAAE 568
            ++  L   +AE
Sbjct: 589 ALLQSLPDFSAE 600



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 179/360 (49%), Gaps = 7/360 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A    D M++    P + ++ +L+  + K       + + K+++  G+ PD+   N 
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295

Query: 122 LINCLCKMGITSGAFVVLGRILRS--CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           LI  L  +     A  +L  ++R      PN VTFN +I GLC  GR+ +A ++   +  
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE 355

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             C  N+VT+N LI GL R      A++L +EM +  G   +PD  TY+ +I G CK   
Sbjct: 356 TGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS-LG--LEPDSFTYSILIKGFCKMWQ 412

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           VD+A++LL  M+DR I P +  Y  L+   C     + A+ LF EM DN    DVV ++ 
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYST 471

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           MI+  CK G +     LL+ ++  G+ PD VTY+ +++ F   G +  A  +   M + G
Sbjct: 472 MIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASG 531

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              DV  ++ LI       ++   + L REM+++ I       +TL + L    N G AL
Sbjct: 532 FLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLV-ASNEGKAL 590


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 249/455 (54%), Gaps = 8/455 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P T+  N +I GLC  GR+  A  +++++N  A  P+ +T+  L++GL + R    A+++
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            +EMV+   A   PD  T   ++  LC    VD A+EL+ +M  R +  N ITY++L+ G
Sbjct: 62  LQEMVS---ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C  +   EA  L   M + G  P VVT+N++I   C+  ++D+ +  +E M+  G +PD
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +TY +L+ GFC    + R  EL   +  +G   D+ +Y+ +I+  CK  ++ DAV ++ 
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM      P+ ITYN+L+ G  + G++ +A++L+ KM  +   PD  T+ T +   CK G
Sbjct: 239 EM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + +A ++FQ +   K    + T+  L++GLC  GR++ A +L   +  +G  P + T +
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            ++   CK  Q+ KA +L+ D  ++  VP+ VT+  L+ G  +  +  + +  L ++ +E
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 415

Query: 569 -KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                + +++ + ++D L +D +  + +  +  ++
Sbjct: 416 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI 450



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 245/473 (51%), Gaps = 9/473 (1%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P   + N++I  LC+ G    A  V  R +     P+ +T+  L++GL    R+ +A ++
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVY-RQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            +++      P+  T   ++  LC       A +L EEM++   A    + +TY++++DG
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMA---ANAITYSALVDG 118

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK   +D+A  L+  M +R   P V+TYNS+I GFC      EA     +M+  G  PD
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           ++T+ A+I   CK   + +   LL  + +RG  PD VTY++++DG C  GR+  A ++F 
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M    C     +YN LI   C+   +++A+ L  +M+ ++  P V+TY TL+S   ++G
Sbjct: 239 EM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L DA +L  +M  N + PD  TF + +DGLC  G + +A+++ + I    C   I TYN
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL--LDME 531
           C+++G CK  +++ A +L    + +G +P+ VT + ++   C+ G+ D+A   L  L+ E
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 415

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
              C  S   +  +L    ++ +    V    +M     V +  + ++ V  L
Sbjct: 416 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 468



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 248/497 (49%), Gaps = 10/497 (2%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           ++  H  D  +  K ++   K+  +   +AV     M+  +  P  T+ T+++  L    
Sbjct: 31  MNDAHPPDFLTYTKLVHGLSKARRL--RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGD 88

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           + D    L + +   G+  +    + L++ LCK      A  ++  +      P  VT+N
Sbjct: 89  RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYN 148

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I G C   R+ EA    +++    C P+++T+  LI G C++R+    L+L  E+   
Sbjct: 149 SIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRR 208

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                 PD+VTY+++IDGLCK G +  A ++  +M   +  P  ITYNSLI G+C   D 
Sbjct: 209 G---FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDM 262

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            EA  L  +M+D+   PDVVT+  +++  CK G++D    L + M+   ++PD VT+ SL
Sbjct: 263 DEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 322

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +DG C  GR+  A EL   +  +GC   +Y+YN +++  CK  +V  A  L  +  S   
Sbjct: 323 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFT-FATYIDGLCKNGFVLEA 453
            P+ +TYN L++G  + G    AL+ +D++       P S   +A  +D LC++G   +A
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           VQ ++ +          T+  ++  LCK  + + A +L   +   G  P   TC  ++  
Sbjct: 443 VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 502

Query: 514 LCKEGQMDKANDLLLDM 530
            C+ G + KA++L  ++
Sbjct: 503 YCRAGMIQKADELASEL 519



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 246/489 (50%), Gaps = 9/489 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG     +++  L +  +    + +++++N +   PD      L++ L K      A  V
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  ++ +   P+  T   ++  LC   R+ +A  L +++       N +T++ L++GLC+
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+ L E M  E G  C P VVTYNSII G C+   VD+A   + QM     +P+
Sbjct: 122 CERLDEAVALVETMA-ERG--CAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           +ITY +LI GFC   D      L  E+   G  PD+VT++ +I+  CK G++     + E
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M      P  +TYNSL+ G+C  G +  A  L   MV   C  DV +Y  L++A CK  
Sbjct: 239 EM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +++DA  L+++M++ ++ P V+T+ +L+ GL   G + DAL+L++++      P  +T+ 
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +DG CK   V +A ++    R+        TYN L+ G C+ GR   A +   +L  +
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 415

Query: 499 G-PIPDVVTCSTMI-HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
           G P P  V    +I   LC++G+ D A     +M  +  VP+  TF T++    + ++  
Sbjct: 416 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ 475

Query: 557 KVVVLLHKM 565
           +   LL +M
Sbjct: 476 QAHELLEEM 484



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 209/401 (52%), Gaps = 8/401 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV   + M +   +P + ++  ++T   + ++ D      +++ + G  PD+     L
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTAL 185

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   CK         +LG + R  FTP+ VT++ +I+GLC  GR+ +A  +F++++   C
Sbjct: 186 IGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---C 242

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P  +T+N+LI G CR  +   A++L  +MV++    C PDVVTY +++   CK G +D 
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD---KCAPDVVTYTTLMSAFCKMGRLDD 299

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL  QM    ++P+V+T+ SL+ G C     ++A  L  E+   G  P + T+N +++
Sbjct: 300 AYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVD 359

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG--C 360
             CK  ++ K   L+     RG  P+TVTYN L+ G C  GR  +A +    + S+G  C
Sbjct: 360 GYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPC 419

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
              V  Y I+++A C+D + +DAV  Y EM+     P+  T+ T++  L +      A +
Sbjct: 420 PTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHE 479

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           L+++M      P   T    +   C+ G + +A ++   +R
Sbjct: 480 LLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 203/380 (53%), Gaps = 7/380 (1%)

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P  +  N +I GLCR      AL ++ +M +       PD +TY  ++ GL K   +  
Sbjct: 2   NPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH----PPDFLTYTKLVHGLSKARRLRD 57

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++L +M      P+  T   ++   C  D   +A+ L  EM+  G+  + +T++A+++
Sbjct: 58  AVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVD 117

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK  ++D+   L+E M +RG  P  VTYNS++ GFC   R+  A      MV++GC  
Sbjct: 118 GLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHP 177

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +Y  LI   CK + V   + L  E+      P ++TY+T++ GL + G L DA+ + 
Sbjct: 178 DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF 237

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M      P + T+ + I G C+ G + EA+++   + + KC   + TY  L++  CKM
Sbjct: 238 EEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKM 294

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GRL  A +LF ++      PDVVT ++++  LC EG+M+ A +LL ++  + C P+  T+
Sbjct: 295 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTY 354

Query: 543 CTLLRGFVQNNKKSKVVVLL 562
             ++ G+ + N+  K   L+
Sbjct: 355 NCVVDGYCKANQVRKAEELV 374



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 165/345 (47%), Gaps = 37/345 (10%)

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-----------------------NGVQ 291
           +NP  + +N +I G C     + A  ++ +M D                       + VQ
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 292 -----------PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
                      PD  T   ++   C   ++D    L+E M+ RG+  + +TY++L+DG C
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
              R+  A  L  +M  +GC   V +YN +I   C+ ++V++A     +M++E   P +I
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TY  L+ G  +  ++G  L+L+ ++      PD  T++T IDGLCK G + +AV +F+ +
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
               C     TYN LI G C+ G +  A +L  ++      PDVVT +T++   CK G++
Sbjct: 241 ---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           D A +L   M A    P  VTF +L+ G     +    + LL ++
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 126/279 (45%), Gaps = 37/279 (13%)

Query: 325 VNPDTVTYNSLMDGFCLVGR----------------------------ISRAREL----- 351
           +NP T+ +N ++ G C  GR                            +S+AR L     
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 352 -FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
               MVS     D  +  +++ + C   +V+DA  L  EML   +  + ITY+ L+ GL 
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           +   L +A+ L++ M      P   T+ + I G C+   V EA    + +    C   I 
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  LI G CK   +    +L   +  +G  PD+VT ST+I  LCK G++  A D+  +M
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
              +C P+ +T+ +L+ G+ +     + + LL KM  +K
Sbjct: 241 ---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 4/122 (3%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTS---FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           +++A+ + D  +  +  P  TS   + I+L  L ++ + D  V  ++ +   G  P    
Sbjct: 402 TDQALQYLD-QLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAAT 460

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
              ++  LCK      A  +L  +++   TP   T + +++  C  G I +A  L  +L 
Sbjct: 461 FATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520

Query: 179 VF 180
           ++
Sbjct: 521 LY 522


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/493 (32%), Positives = 252/493 (51%), Gaps = 41/493 (8%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+ P +   N +++  CK G    A  +L ++ +    PN VT+N L+NGL   G + +A
Sbjct: 185 GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQA 244

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L +++     + +  T++ LI G C       A +L EEM++  GA+  P +VTYN+I
Sbjct: 245 KELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSR-GAV--PTLVTYNTI 301

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           + GLCK G V  A++LL  M ++N+ P++++YN+LI G+  + +  EA  LF E+   G+
Sbjct: 302 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGL 361

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P VVT+N +I+  C+ G +D   RL + MI+ G +PD  T+  L+ GFC +G +  A+E
Sbjct: 362 VPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKE 421

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF  M+++G + D ++Y   I    K      A  +  EML+    P +ITYN  + GL 
Sbjct: 422 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 481

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF------------- 457
           ++GNL +A +L+ KM  N +VPD  T+ + I      G + +A  VF             
Sbjct: 482 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVV 541

Query: 458 --------QAIRNCKCELRIE---------------TYNCLINGLCKMGRLKTACKLFHR 494
                    A+R  + +L I                TYN LINGLCK+ ++  A K F  
Sbjct: 542 TYTVLIHSYAVRG-RLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTE 600

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +Q KG  P+  T + +I+  C  G   +A  L  DM  +   P   T   LL+  +  + 
Sbjct: 601 MQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLK-HLNKDY 659

Query: 555 KSKVVVLLHKMAA 567
           KS VV  L  + A
Sbjct: 660 KSHVVRHLENVIA 672



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 187/359 (52%), Gaps = 1/359 (0%)

Query: 222 PDVVTYNSIIDGLC-KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           PD+   N ++  L  +D  +D A+E+   M +  I P V+TYN+++  FC     +EA  
Sbjct: 152 PDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQ 211

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L ++M   G  P+ VT+N ++N     G++++   L++ M++ G+     TY+ L+ G+C
Sbjct: 212 LLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYC 271

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G++  A  L   M+S+G    + +YN ++   CK  +V DA  L   M+++ + P ++
Sbjct: 272 EKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLV 331

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YNTL+ G  ++GN+G+A  L  +++   +VP   T+ T IDGLC+ G +  A+++   +
Sbjct: 332 SYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEM 391

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                +  + T+  L+ G CK+G L  A +LF  + ++G  PD     T I    K G  
Sbjct: 392 IKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 451

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            KA  +  +M A+   P  +T+   + G  +     +   L+ KM    LV   ++ +S
Sbjct: 452 SKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTS 510



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 124/224 (55%), Gaps = 1/224 (0%)

Query: 351 LFVSMVSKGCRHDVYSYN-ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +F  MVSKG   D+ + N +L     +D  ++ A  +Y  M+   IRP+V+TYNT+L   
Sbjct: 141 VFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSF 200

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            + G + +AL+L+ +MQ    +P+  T+   ++GL  +G + +A ++ Q +     E+  
Sbjct: 201 CKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSA 260

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY+ LI G C+ G+L  A +L   +  +G +P +VT +T+++ LCK G++  A  LL  
Sbjct: 261 YTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDV 320

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           M  KN +P  V++ TL+ G+ +     +  +L  ++    LV S
Sbjct: 321 MVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPS 364


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/509 (30%), Positives = 254/509 (49%), Gaps = 4/509 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+  F  M + +  P   S   LL   AK  + D V   FK +   G  P +F  N++
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIM 268

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+C+CK G    A  +   +      P+TVT+N +I+G    GR+ +    F+++    C
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+V+T+N LIN  C+     + L+ + EM    G   KP+VV+Y++++D  CK+G + +
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMK---GNGLKPNVVSYSTLVDAFCKEGMMQQ 385

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +  + M+   + PN  TY SLI   C + +  +A  L  EM+  GV+ +VVT+ A+I+
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   +M +   L   M   GV P+  +YN+L+ GF     + RA EL   +  +G + 
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  Y   I   C  +K+E A  +  EM    I+ + + Y TL+   F+ GN  + L L+
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN-CKCELRIETYNCLINGLCK 481
           D+M+  D+     TF   IDGLCKN  V +AV  F  I N    +     +  +I+GLCK
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             +++ A  LF ++  KG +PD    ++++    K+G + +A  L   M         + 
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           + +L+ G    N+  K    L +M  E +
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMIGEGI 714



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 252/507 (49%), Gaps = 4/507 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG   F  L ++L      +  +  F ++    +FP     N L++   K+G T      
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              ++ +   P   T+N +I+ +C EG +  A  LF+++      P+ VT+N++I+G  +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                  +  FEEM +     C+PDV+TYN++I+  CK G +    E   +MK   + PN
Sbjct: 310 VGRLDDTVCFFEEMKD---MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V++Y++L+  FC     ++A   +++M   G+ P+  T+ ++I+ NCK G +    RL  
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+Q GV  + VTY +L+DG C   R+  A ELF  M + G   ++ SYN LI+   K +
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++ A+ L  E+    I+P ++ Y T + GL  +  +  A  ++++M+   +  +S  + 
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T +D   K+G   E + +   ++    E+ + T+  LI+GLCK   +  A   F+R+ + 
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606

Query: 499 -GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G   +    + MI  LCK+ Q++ A  L   M  K  VP    + +L+ G  +     +
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            + L  KMA   + +  L+ +S V  L
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGL 693



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 233/459 (50%), Gaps = 3/459 (0%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R+   P    F+ L + L   G + EA + F K+  F   P   + N L++   +   T 
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
              + F++M+   GA  +P V TYN +ID +CK+G V+ A+ L  +MK R + P+ +TYN
Sbjct: 245 DVKRFFKDMI---GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 301

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S+I GF  V    +  C F EM D   +PDV+T+NA+IN  CK GK+         M   
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P+ V+Y++L+D FC  G + +A + +V M   G   + Y+Y  LI+ANCK   + DA
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EML   +  +V+TY  L+ GL     + +A +L  KM    V+P+  ++   I G
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             K   +  A+++   ++    +  +  Y   I GLC + +++ A  + + ++  G   +
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            +  +T++    K G   +   LL +M+  +   + VTFC L+ G  +N   SK V   +
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +++ +  + ++ ++ + ++D L KD +       F  ++
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV 640



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 177/379 (46%), Gaps = 39/379 (10%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S++ L+    K       +  +  +   GL P+ +    LI+  CK+G  S AF +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +L+     N VT+  LI+GLC   R+ EA  LF K++     PN+ ++N LI+G  +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +N   AL+L  E+    G   KPD++ Y + I GLC    ++ AK ++ +MK+  I  N
Sbjct: 485 AKNMDRALELLNELK---GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541

Query: 259 VITYNSLI----------CGFCCVDDWKEAK--------CLFIEMM-------------- 286
            + Y +L+           G   +D+ KE          C+ I+ +              
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601

Query: 287 ----DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
               D G+Q +   F AMI+  CKD +++    L E M+Q+G+ PD   Y SLMDG    
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G +  A  L   M   G + D+ +Y  L+       +++ A     EM+ E I P  +  
Sbjct: 662 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLC 721

Query: 403 NTLLSGLFQVGNLGDALKL 421
            ++L   +++G + +A++L
Sbjct: 722 ISVLKKHYELGCIDEAVEL 740



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 103/278 (37%), Gaps = 85/278 (30%)

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR---------------PS 398
           SM   G +H V SY I+ +     +   DA  + +EM+  +                 P 
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS------------------------ 434
              ++ L S L  +G L +A++   KM+   V P +                        
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251

Query: 435 -----------FTFATYIDGLCKNGFVLEA------------------------------ 453
                      FT+   ID +CK G V  A                              
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311

Query: 454 -----VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
                V  F+ +++  CE  + TYN LIN  CK G+L    + +  ++  G  P+VV+ S
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           T++   CKEG M +A    +DM     VP+E T+ +L+
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 160/543 (29%), Positives = 270/543 (49%), Gaps = 15/543 (2%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F   +K+   P + +F IL+     +   +  + L  ++   G  PD    N ++  LCK
Sbjct: 199 FQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCK 258

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
               +    +L ++  S   PN  T+N L++G C    + EAA + + +      P+V T
Sbjct: 259 RSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWT 318

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +NT++ GLC       A++L ++M   F  +  PDVVTYN++IDG  +    D A +L+ 
Sbjct: 319 YNTMVRGLCDEGKIDEAVRLRDKM-ESFKLV--PDVVTYNTLIDGCFEHRGSDAAFKLVE 375

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK R +  N +T+N +I  FC      EA  + ++M+++G  PD  T+N MIN  CK G
Sbjct: 376 EMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG 435

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           KM +  ++++ M ++G+  DT T N+L+   CL  ++  A  L +    +G   D  +Y 
Sbjct: 436 KMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYG 495

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI    KD++ + A+ L+ EM    I  ++ITYNT++ GL   G    A+  ++++   
Sbjct: 496 TLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEK 555

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            +VPD  T    I G C  G V +A Q    +     +  I T N L+ GLC+ G L+  
Sbjct: 556 GLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKG 615

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             LF+    KG   D VT + +I   CKE +++ A DL+ +ME KN  P   T+  ++ G
Sbjct: 616 LTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTG 675

Query: 549 FVQNNKKSKVVVLLHKMA-----------AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
             +  +  +   L  K A           + +L  SD+  S ++  L ++  KY++ +  
Sbjct: 676 LTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQG-KYKDAMKL 734

Query: 598 FRH 600
           F+ 
Sbjct: 735 FQQ 737



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/437 (32%), Positives = 228/437 (52%), Gaps = 8/437 (1%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLC---AEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           +  ++ R  F PN +T N L+N L    +   ++ +  +F+        PNV TFN LI+
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G C   NT  AL+L  +M  E+G  C PD VTYN+++  LCK   + + ++LLLQMK+  
Sbjct: 220 GYCSDNNTEEALRLINQM-GEYG--CCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSG 276

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TYN L+ G+C +   KEA  +   M   G+ PDV T+N M+   C +GK+D+  
Sbjct: 277 LFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAV 336

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR-ELFVSMVSKGCRHDVYSYNILINA 373
           RL + M    + PD VTYN+L+DG C   R S A  +L   M ++G + +  ++NI+I  
Sbjct: 337 RLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKW 395

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C + K+++A  +  +M+     P   TYNT+++G  + G + +A K++D+M    +  D
Sbjct: 396 FCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLD 455

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           +FT  T +  +C    + +A  +    R     L   TY  LI G  K  +   A KL+ 
Sbjct: 456 TFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWE 515

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            ++  G +  ++T +T+I  LC  G+ D+A D L ++  K  VP E T   ++ G+    
Sbjct: 516 EMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEG 575

Query: 554 KKSKVVVLLHKMAAEKL 570
              K     +KM    L
Sbjct: 576 AVEKAFQFHNKMVEHSL 592



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 252/559 (45%), Gaps = 49/559 (8%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + EA+   + M +    P   ++  +LT L K  Q   V  L  ++ ++GLFP+    N+
Sbjct: 227 TEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNI 286

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++  CK+     A  V+  +      P+  T+N ++ GLC EG+I EA RL  K+  F 
Sbjct: 287 LVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFK 346

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+VVT+NTLI+G    R +  A KL EEM        K + VT+N +I   C +G +D
Sbjct: 347 LVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMK---ARGVKENGVTHNIMIKWFCTEGKID 403

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  ++++M +   +P+  TYN++I G+C      EA  +  EM   G++ D  T N ++
Sbjct: 404 EASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLL 463

Query: 302 NYNC-----------------------------------KDGKMDKVNRLLELMIQRGVN 326
           +  C                                   KD + D+  +L E M + G+ 
Sbjct: 464 HTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIV 523

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
              +TYN+++ G CL G+  +A +    ++ KG   D  + NI+I+  C +  VE A   
Sbjct: 524 ATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQF 583

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + +M+   ++P + T N LL GL + G L   L L +         D+ T+   I   CK
Sbjct: 584 HNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCK 643

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP------ 500
              + +A  +   +     E    TYN ++ GL K GR + A KL  +   KG       
Sbjct: 644 ERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQD 703

Query: 501 -IPDVVTCSTM----IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             P++ T   M    I  LC +G+   A  L    E K    ++ T+  L+ G ++  K 
Sbjct: 704 TSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKS 763

Query: 556 SKVVVLLHKMAAEKLVVSD 574
                LL  M +  +   D
Sbjct: 764 FTTTSLLPFMVSATIQFFD 782



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 191/367 (52%), Gaps = 3/367 (0%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDK---AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
           +P+++T N++++ L +         ++E+        + PNV T+N LI G+C  ++ +E
Sbjct: 170 RPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEE 229

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  L  +M + G  PD VT+N ++   CK  ++ +V  LL  M   G+ P+  TYN L+ 
Sbjct: 230 ALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVH 289

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G+C +  +  A E+   M  KG   DV++YN ++   C + K+++AV L  +M S ++ P
Sbjct: 290 GYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVP 349

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            V+TYNTL+ G F+      A KL+++M+   V  +  T    I   C  G + EA  V 
Sbjct: 350 DVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVM 409

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             +          TYN +ING CK G++  A K+   +  KG   D  T +T++H +C E
Sbjct: 410 VKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLE 469

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
            Q+D A  L +    +  +  EVT+ TL+ G+ ++ +  + + L  +M    +V + ++ 
Sbjct: 470 KQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITY 529

Query: 578 SSKVVDL 584
           ++ +  L
Sbjct: 530 NTIIRGL 536


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 260/505 (51%), Gaps = 6/505 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +SG +   EA      M++ +  P + +F IL+  LA+ +++  V ++ + +   G+ P+
Sbjct: 263 RSGRV--EEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPN 320

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             + N LI   C+ G  S A  +   ++        VT+N +   LC EG +  A ++  
Sbjct: 321 EVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILD 380

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTL-VALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           ++ +     +   FN+++    R    L V L+L  EMV  F    KP+     + I  L
Sbjct: 381 EMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARF---LKPNDAVMTACIQEL 437

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK G  ++A E+   +  + +  N+ T N+LI G C  ++ KEA  +   M+D+GV+ D 
Sbjct: 438 CKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDR 497

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +T+N MI + CK  KM++  +L + MI+RG  PD  T+N+ +  +C +G++     L   
Sbjct: 498 ITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQ 557

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M S+G + D+ +Y  +I+  CK + V  A     E++   +RP+ + YN L+ G  + G+
Sbjct: 558 MKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGS 617

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           + DA+ ++D M+ N + P   T+ + +  +C  G V EA ++F        EL +  Y  
Sbjct: 618 ISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTI 677

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +I G CK+G++  A   F  + ++   P+ +T +T+++  CK G  ++A  L  +M +  
Sbjct: 678 IIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSG 737

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVV 559
            VP  V++ TL+ G  + +   K+V
Sbjct: 738 IVPDTVSYNTLISGCCEVDSLDKIV 762



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 244/489 (49%), Gaps = 4/489 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + ++T+++  L +  + D    +   L  +G+ P +   N+L++ LC+ G    AF 
Sbjct: 213 APDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQ 272

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           + GR++     P+ VTF  LINGL    R  E   + +++  F   PN V +N LI   C
Sbjct: 273 LKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHC 332

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  +   AL+LF+EMV++     K  VVTYN I   LCK+G ++ A+++L +M    +  
Sbjct: 333 REGHCSEALRLFDEMVSKG---IKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTV 389

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFI-EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           +   +NS++          +     I EM+   ++P+     A I   CK GK ++   +
Sbjct: 390 HCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEI 449

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
             L++ +G+  +  T N+L+ G C    +  A ++  +MV  G   D  +YNI+I   CK
Sbjct: 450 WFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCK 509

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             K+E+A+ L  +M+    +P + T+NT L     +G + D L L+D+M+   + PD  T
Sbjct: 510 ASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVT 569

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + T IDG CK   V +A +    +           YN LI G  + G +  A  +   ++
Sbjct: 570 YGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMK 629

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
           H G  P  +T +++++W+C  G +++A ++      KN     + +  +++GF +  K  
Sbjct: 630 HNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKID 689

Query: 557 KVVVLLHKM 565
           + V+   +M
Sbjct: 690 EAVMYFKEM 698



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 203/409 (49%), Gaps = 3/409 (0%)

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
           A G +  AA  F +L+     P++ T N L+  L       +A K+F EM +  G    P
Sbjct: 157 APGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRD--GNAVAP 214

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           DV TY  +I  LC+ G +D A  +L +++   I P V+TYN L+   C     +EA  L 
Sbjct: 215 DVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLK 274

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M++  ++P +VTF  +IN   +  +  +V+ +L+ M   G+ P+ V YN L+   C  
Sbjct: 275 GRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCRE 334

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G  S A  LF  MVSKG +  V +YN++  A CK+ ++E A  +  EML   +      +
Sbjct: 335 GHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLF 394

Query: 403 NTLLS-GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           N++++  L   G L   L+LI +M    + P+       I  LCK G   EA +++  + 
Sbjct: 395 NSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVL 454

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                + I T N LI+GLC+   +K A K+   +   G   D +T + MI + CK  +M+
Sbjct: 455 GKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKME 514

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           +A  L  DM  +   P   TF T LR +    K   ++ LL +M +E L
Sbjct: 515 EAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGL 563



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 3/306 (0%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+  L +         + K +  +G+  D    N++I   CK      A  +   +++  
Sbjct: 468 LIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG 527

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F P+  TFN  +   C  G++ +   L  ++      P++VT+ T+I+G C+ ++   A 
Sbjct: 528 FKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKAN 587

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           K   E++       +P+ V YN++I G  ++G +  A  +L  MK   I P  ITYNSL+
Sbjct: 588 KYLIELIKNG---LRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLM 644

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
              C     +EAK +F + +   ++  V+ +  +I   CK GK+D+     + M  R + 
Sbjct: 645 YWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIR 704

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P+ +TY +LM  +C  G    A +LF  MVS G   D  SYN LI+  C+   ++  V  
Sbjct: 705 PNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVES 764

Query: 387 YREMLS 392
             EM S
Sbjct: 765 PAEMSS 770


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 248/475 (52%), Gaps = 3/475 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+    + K+ D     F  +   G+ P +   N +++   K+  T   +V+   + 
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R        TFN +IN LC EG++ +A      +      PNVVT+NT+I+G C +R  +
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYC-SRGRV 287

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
              ++  +++   G   +PD  TY S+I G+CK G +++A  +L +MK+  + P  +TYN
Sbjct: 288 EGARMVLDIMKNRG--VEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI G+C   D  +A     EM+   + P V T+N +I+    +GKMD+ + +++ M   
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD++TYN L++G+C  G   +A  L   M+SKG +  + +Y  LI    K  +++ A
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+ +++ E   P +I +N L+ G    GNL  A  L+ +M   ++VPD  T+ T + G
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG 525

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C+ G V EA ++ + ++         +YN LI+G  K G +  A  +   +   G  P 
Sbjct: 526 RCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPT 585

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           ++T + +I  LCK  Q D A +LL +M +K   P + T+ +L+ G  + +  S+ 
Sbjct: 586 LLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 233/463 (50%), Gaps = 3/463 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   FD M +    P + +F  +L++  K  Q +TV  L+  +    +   ++  N++
Sbjct: 183 DDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIM 242

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LCK G    A   +G +      PN VT+N +I+G C+ GR+  A  +   +     
Sbjct: 243 INVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGV 302

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+  T+ +LI+G+C+      A  + E+M  E G +  P  VTYN++IDG C  G + K
Sbjct: 303 EPDSYTYGSLISGMCKGGKLEEASGILEKM-KEIGLL--PTAVTYNTLIDGYCNKGDLVK 359

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A     +M  R I P V TYN LI          EA  +  +M D+G+ PD +T+N +IN
Sbjct: 360 AFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILIN 419

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ G   K   L + MI +G+ P  VTY SL+       R+  A +LF  ++ +G   
Sbjct: 420 GYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASP 479

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  +N LI+ +C +  ++ A  L +EM    I P  +TYNTL+ G  + G + +A +L+
Sbjct: 480 DLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELL 539

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M+   + PD  ++ T I G  K G + +A  +   + +      + TYN LI GLCK 
Sbjct: 540 KEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKN 599

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
            +   A +L   +  KG  PD  T  ++I  + K     +A+D
Sbjct: 600 QQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 215/402 (53%), Gaps = 3/402 (0%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           T +++ F+ LI   C   R  +A   F  +      P + TFN +++   +   T     
Sbjct: 163 TKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWV 222

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L+ EM   F    K  V T+N +I+ LCK+G + KAK+ +  M++  + PNV+TYN++I 
Sbjct: 223 LYAEM---FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIH 279

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G+C     + A+ +   M + GV+PD  T+ ++I+  CK GK+++ + +LE M + G+ P
Sbjct: 280 GYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLP 339

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             VTYN+L+DG+C  G + +A      MV +     V +YN+LI+A   + K+++A  + 
Sbjct: 340 TAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMI 399

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           ++M    I P  ITYN L++G  + GN   A  L D+M    + P   T+ + I  L K 
Sbjct: 400 KDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKR 459

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             +  A  +F+ I        +  +N LI+G C  G L  A  L   +  +  +PD VT 
Sbjct: 460 NRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTY 519

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           +T++   C+EG++++A +LL +M+ +   P  +++ TL+ G+
Sbjct: 520 NTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGY 561



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 221/458 (48%), Gaps = 3/458 (0%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            V ++LI   C++     AF     +      P   TFN +++      +      L+ +
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +        V TFN +IN LC+    L   K F   +   G   KP+VVTYN++I G C 
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCK-EGKLKKAKDFIGSMENLG--VKPNVVTYNTVIHGYCS 283

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G V+ A+ +L  MK+R + P+  TY SLI G C     +EA  +  +M + G+ P  VT
Sbjct: 284 RGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVT 343

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I+  C  G + K     + M++R + P   TYN L+    L G++  A  +   M 
Sbjct: 344 YNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMG 403

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G   D  +YNILIN  C+    + A  L+ EM+S+ I+P+++TY +L+  L +   + 
Sbjct: 404 DSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMK 463

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A  L +K+      PD   F   IDG C NG +  A  + + +          TYN L+
Sbjct: 464 AADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLM 523

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            G C+ G+++ A +L   ++ +G  PD ++ +T+I    K G ++ A  +  +M +    
Sbjct: 524 QGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFN 583

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           P+ +T+  L++G  +N +      LL +M ++ +   D
Sbjct: 584 PTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDD 621



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 186/393 (47%), Gaps = 35/393 (8%)

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +F E+      +     + ++ +I   C+    D A E    MK++ + P + T+N+++ 
Sbjct: 150 VFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLS 209

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            F  ++  +    L+ EM    ++  V TFN MIN  CK+GK+ K    +  M   GV P
Sbjct: 210 LFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKP 269

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + VTYN+++ G+C  GR+  AR +   M ++G   D Y+Y  LI+  CK  K+E+A  + 
Sbjct: 270 NVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGIL 329

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            +M    + P+ +TYNTL+ G    G+L  A    D+M    ++P   T+   I  L   
Sbjct: 330 EKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLE 389

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG------------------------ 483
           G + EA  + + + +        TYN LING C+ G                        
Sbjct: 390 GKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTY 449

Query: 484 -----------RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
                      R+K A  LF ++  +G  PD++  + +I   C  G +D+A  LL +M+ 
Sbjct: 450 TSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDK 509

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +N VP EVT+ TL++G  +  K  +   LL +M
Sbjct: 510 RNIVPDEVTYNTLMQGRCREGKVEEARELLKEM 542



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 156/310 (50%), Gaps = 5/310 (1%)

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           + F+ +I   C+  + D      ++M ++GV P   T+N+++  F  + +      L+  
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M     +  VY++NI+IN  CK+ K++ A      M +  ++P+V+TYNT++ G    G 
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A  ++D M+   V PDS+T+ + I G+CK G + EA  + + ++         TYN 
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI+G C  G L  A      +  +  +P V T + +IH L  EG+MD+A+ ++ DM    
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406

Query: 535 CVPSEVTFCTLLRGFVQ--NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
            VP  +T+  L+ G+ +  N KK+     LH     K +   L   + ++ +LSK  + +
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKA---FNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMK 463

Query: 593 ECLNQFRHLL 602
              + F  ++
Sbjct: 464 AADDLFEKII 473



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 118/217 (54%), Gaps = 3/217 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A    D MI     P + ++T L+ +L+K  +      LF+++   G  PDL + N 
Sbjct: 427 AKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNA 486

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+  C  G    AF +L  + +    P+ VT+N L+ G C EG++ EA  L K++    
Sbjct: 487 LIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRG 546

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ +++NTLI+G  +  +   A  + +EM++  G    P ++TYN++I GLCK+   D
Sbjct: 547 IRPDHISYNTLISGYSKRGDINDAFTIRDEMLS-IG--FNPTLLTYNALIQGLCKNQQGD 603

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
            A+ELL +M  + I P+  TY SLI G   VDD  EA
Sbjct: 604 LAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 158/514 (30%), Positives = 263/514 (51%), Gaps = 13/514 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M K+   P   +++IL+ M  +  + DT +S    +   GL   ++  N L
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G  S A   +  ++     P  VT+  L+ G C++G+I +A RL+ ++     
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++ TF TL++GL R      A+KLF EM  E+    KP+ VTYN +I+G C++G + K
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNV--KPNRVTYNVMIEGYCEEGDMSK 560

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E L +M ++ I P+  +Y  LI G C      EAK     +     + + + +  +++
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS----MVSK 358
             C++GK+++   + + M+QRGV+ D V Y  L+DG        + R+LF      M  +
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG----SLKHKDRKLFFGLLKEMHDR 676

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G + D   Y  +I+A  K    ++A  ++  M++E   P+ +TY  +++GL + G + +A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE-AVQVFQAIRNCKCELRIETYNCLIN 477
             L  KMQ    VP+  T+  ++D L K    ++ AV++  AI          TYN LI 
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA-NTATYNMLIR 795

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G C+ GR++ A +L  R+   G  PD +T +TMI+ LC+   + KA +L   M  K   P
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             V + TL+ G     +  K   L ++M  + L+
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 156/572 (27%), Positives = 264/572 (46%), Gaps = 72/572 (12%)

Query: 64  EAVYFFDCMI-KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + V  F  MI K+   P + + + LL  L K + +   + LF  + S G+ PD+++   +
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  LC++   S A  ++  +  +    N V +N LI+GLC + ++ EA  + K L     
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEM------------------------------ 212
            P+VVT+ TL+ GLC+ +   + L++ +EM                              
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALN 353

Query: 213 ----VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
               V +FG    P++  YN++ID LCK     +A+ L  +M    + PN +TY+ LI  
Sbjct: 354 LVKRVVDFGV--SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           FC       A     EM+D G++  V  +N++IN +CK G +      +  MI + + P 
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            VTY SLM G+C  G+I++A  L+  M  KG    +Y++  L++   +   + DAV L+ 
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM    ++P+ +TYN ++ G  + G++  A + + +M    +VPD++++   I GLC  G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA---CK--------------- 490
              EA      +    CEL    Y  L++G C+ G+L+ A   C+               
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651

Query: 491 -----------------LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
                            L   +  +G  PD V  ++MI    K G   +A  +   M  +
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            CVP+EVT+  ++ G  +    ++  VL  KM
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 254/510 (49%), Gaps = 7/510 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           F +L+    ++++    V +FK + +   L P++  L+ L++ L K      A  +   +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +     P+   +  +I  LC    +  A  +   +    CD N+V +N LI+GLC+ +  
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A+ + +++    G   KPDVVTY +++ GLCK    +   E++ +M     +P+    
Sbjct: 279 WEAVGIKKDLA---GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           +SL+ G       +EA  L   ++D GV P++  +NA+I+  CK  K  +   L + M +
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G+ P+ VTY+ L+D FC  G++  A      MV  G +  VY YN LIN +CK   +  
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A     EM+++++ P+V+TY +L+ G    G +  AL+L  +M    + P  +TF T + 
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GL + G + +AV++F  +     +    TYN +I G C+ G +  A +    +  KG +P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D  +   +IH LC  GQ  +A   +  +   NC  +E+ +  LL GF +  K  + + + 
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635

Query: 563 HKMAAEKLVVSDLSLSSKVVD--LLSKDKK 590
            +M  ++ V  DL     ++D  L  KD+K
Sbjct: 636 QEM-VQRGVDLDLVCYGVLIDGSLKHKDRK 664



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 255/501 (50%), Gaps = 7/501 (1%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D M+ ++ SP   + + L+  L K  + +  ++L KR+   G+ P+LFV N LI+ LCK 
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
                A ++  R+ +    PN VT++ LI+  C  G++  A     ++       +V  +
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N+LING C+  +   A     EM+N+     +P VVTY S++ G C  G ++KA  L  +
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINK---KLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  + I P++ T+ +L+ G       ++A  LF EM +  V+P+ VT+N MI   C++G 
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-CRHDVYSYN 368
           M K    L+ M ++G+ PDT +Y  L+ G CL G+ S A+ +FV  + KG C  +   Y 
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYT 616

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L++  C++ K+E+A+ + +EM+   +   ++ Y  L+ G  +  +      L+ +M   
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            + PD   + + ID   K G   EA  ++  + N  C     TY  +INGLCK G +  A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCK-EGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
             L  ++Q    +P+ VT    +  L K E  M KA +L  +   K  + +  T+  L+R
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH-NAILKGLLANTATYNMLIR 795

Query: 548 GFVQNNKKSKVVVLLHKMAAE 568
           GF +  +  +   L+ +M  +
Sbjct: 796 GFCRQGRIEEASELITRMIGD 816



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 189/412 (45%), Gaps = 38/412 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A+  +  M     +P + +FT LL+ L +       V LF  +    + P+    N++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+ G  S AF  L  +      P+T ++  LI+GLC  G+  EA      L+   C
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + N + +  L++G CR      AL + +EMV     +   D+V Y  +IDG  K      
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL---DLVCYGVLIDGSLKHKDRKL 665

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              LL +M DR + P+ + Y S+I       D+KEA  ++  M++ G  P+ VT+ A+IN
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725

Query: 303 YNCKDG----------KMDKVNRL-------------------------LELMIQRGVNP 327
             CK G          KM  V+ +                         L   I +G+  
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           +T TYN L+ GFC  GRI  A EL   M+  G   D  +Y  +IN  C+   V+ A+ L+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
             M  + IRP  + YNTL+ G    G +G A +L ++M    ++P++ T  T
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 178/386 (46%), Gaps = 52/386 (13%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  F+ M +    P   ++ +++    +           K +   G+ PD +    LI
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR----------- 172
           + LC  G  S A V +  + +     N + +  L++G C EG++ EA             
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644

Query: 173 ------------------------LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
                                   L K+++     P+ V + ++I+   +T +   A  +
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           ++ M+NE    C P+ VTY ++I+GLCK GFV++A+ L  +M+  +  PN +TY      
Sbjct: 705 WDLMINEG---CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG----- 756

Query: 269 FCCVD-------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
            C +D       D ++A  L   ++  G+  +  T+N +I   C+ G++++ + L+  MI
Sbjct: 757 -CFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             GV+PD +TY ++++  C    + +A EL+ SM  KG R D  +YN LI+  C   ++ 
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874

Query: 382 DAVCLYREMLSERIRPSVITYNTLLS 407
            A  L  EML + + P+  T  T  S
Sbjct: 875 KATELRNEMLRQGLIPNNKTSRTTTS 900



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 124/292 (42%), Gaps = 54/292 (18%)

Query: 356 VSKGCRHDVYSYNILINA------------------------------------NCK--- 376
           + +G  H   S+ ILI+A                                     CK   
Sbjct: 96  LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSS 155

Query: 377 -------------DQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLI 422
                         ++V D V +++ M+++  + P V T + LL GL +  + G A++L 
Sbjct: 156 SSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M    + PD + +   I  LC+   +  A ++   +    C++ I  YN LI+GLCK 
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            ++  A  +   L  K   PDVVT  T+++ LCK  + +   +++ +M      PSE   
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            +L+ G  +  K  + + L+ K   +  V  +L + + ++D L K +K+ E 
Sbjct: 336 SSLVEGLRKRGKIEEALNLV-KRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 176/569 (30%), Positives = 268/569 (47%), Gaps = 63/569 (11%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           T +  F  +  K+      E    F  M+    S  +++F  LL +L K         L 
Sbjct: 186 TVVGGFYEENFKA------EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
            ++   G+ P+LF  NL I  LC+ G   GA  ++G ++     P+ +T+N LI GLC  
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPD 223
            +  EA     K+     +P+  T+NTLI G C+     +A ++  + V N F     PD
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF----VPD 355

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
             TY S+IDGLC +G  ++A  L  +   + I PNVI YN+LI G        EA  L  
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM + G+ P+V TFN ++N  CK G +   + L+++MI +G  PD  T+N L+ G+    
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           ++  A E+   M+  G   DVY+YN L+N  CK  K ED +  Y+ M+ +   P++ T+N
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            LL  L +   L +AL L+++M+   V PD+ TF T IDG CKNG +  A  +F+ +   
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595

Query: 464 -KCELRIETYNCLI-----------------------------------NGLCKMGRLKT 487
            K      TYN +I                                   +G CK G +  
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV-TFCTLL 546
             K    +   G IP + T   +I+ LC E ++ +A  ++  M  K  VP  V T C + 
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDV- 714

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
                 +KK        ++AA KLV+ DL
Sbjct: 715 ------DKK--------EVAAPKLVLEDL 729



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 160/572 (27%), Positives = 272/572 (47%), Gaps = 8/572 (1%)

Query: 3   FKSSHRSF-SLASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNIT 61
           FK +  ++ S+  K GY   F        + + ++ +H   +G  +    N   K     
Sbjct: 36  FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHML-EGVYVGAMKNYGRKG---K 91

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
             EAV  F+ M      P + S+  ++++L  +  +D    ++ R+   G+ PD++   +
Sbjct: 92  VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            +   CK      A  +L  +       N V +  ++ G   E    E   LF K+    
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
               + TFN L+  LC+  +     KL ++++   G +  P++ TYN  I GLC+ G +D
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR-GVL--PNLFTYNLFIQGLCQRGELD 268

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  ++  + ++   P+VITYN+LI G C    ++EA+    +M++ G++PD  T+N +I
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              CK G +    R++   +  G  PD  TY SL+DG C  G  +RA  LF   + KG +
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +V  YN LI        + +A  L  EM  + + P V T+N L++GL ++G + DA  L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +  M      PD FTF   I G      +  A+++   + +   +  + TYN L+NGLCK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             + +   + +  +  KG  P++ T + ++  LC+  ++D+A  LL +M+ K+  P  VT
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           F TL+ GF +N        L  KM     V S
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS 600



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 184/367 (50%), Gaps = 5/367 (1%)

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
           ++ + AL++F  M  E G   K  + TY S+I+ L   G  +  +E+L+ M++ N+  ++
Sbjct: 18  KDPMKALEMFNSMRKEVGF--KHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRE-NVGNHM 74

Query: 260 I--TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +   Y   +  +      +EA  +F  M     +P V ++NA+++     G  D+ +++ 
Sbjct: 75  LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY 134

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M  RG+ PD  ++   M  FC   R   A  L  +M S+GC  +V +Y  ++    ++
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
               +   L+ +ML+  +   + T+N LL  L + G++ +  KL+DK+    V+P+ FT+
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
             +I GLC+ G +  AV++   +     +  + TYN LI GLCK  + + A     ++ +
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +G  PD  T +T+I   CK G +  A  ++ D      VP + T+ +L+ G     + ++
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374

Query: 558 VVVLLHK 564
            + L ++
Sbjct: 375 ALALFNE 381



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 6/202 (2%)

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL---CKNGFVLE 452
           + ++ TY +++  L   G      +++  M+ N  V +      Y+  +    + G V E
Sbjct: 37  KHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN--VGNHMLEGVYVGAMKNYGRKGKVQE 94

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           AV VF+ +    CE  + +YN +++ L   G    A K++ R++ +G  PDV + +  + 
Sbjct: 95  AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             CK  +   A  LL +M ++ C  + V +CT++ GF + N K++   L  KM A  + +
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214

Query: 573 SDLSLSSKVVDLLSKDKKYREC 594
             LS  +K++ +L K    +EC
Sbjct: 215 C-LSTFNKLLRVLCKKGDVKEC 235


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 257/510 (50%), Gaps = 9/510 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P   S+ +++  L ++ +    + +F  +   G+ P+    N +I+   K G     F
Sbjct: 190 PPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGF 249

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  ++L     PN VT+N L++GLC  GR+ E   L  ++   +  P+  T++ L +GL
Sbjct: 250 RLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGL 309

Query: 197 CRTRNTLVALKLFEEMVNE---FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
            RT  +   L LF E + +    GA       T + +++GLCKDG V KAK++   +   
Sbjct: 310 TRTGESQTMLSLFAESLKKGVMLGAY------TCSILLNGLCKDGKVAKAKQVFEMLVHT 363

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            + P  + YN+LI G+C V D + A C+F +M    ++PD +T+NA+IN  CK   + K 
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 423

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L+  M + GV+P   T+N+L+D +   G++ +   +   M  KG + DV S+  ++ A
Sbjct: 424 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK+ K+ +AV +  +M+ + + P+   YN+++    + G+   AL L++KM+ + V   
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSAS 543

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   + GLC++  + EA ++   +RN      + +YN +I+  C  G    A +L  
Sbjct: 544 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 603

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +   G  P + TC T++  L   G++     L   M  KN  PS   +  ++  +V+  
Sbjct: 604 EMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCE 663

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             SKV  L  +M+ + +   D   S+  +D
Sbjct: 664 NDSKVASLKKEMSEKGIAFDDTKRSNHELD 693



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 255/526 (48%), Gaps = 40/526 (7%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P ++S  +LL  L    ++  V + F  L + G  PD F  N ++      G    A 
Sbjct: 118 PLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVAL 177

Query: 137 VVLGRILRS--CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
            +L R+ RS     P+  ++N +I GL   G+  +A ++F ++      PN +T+NT+I+
Sbjct: 178 AMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMID 237

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +     +L ++M+++     KP+VVTYN ++ GLC+ G +D+ + L+ +M   +
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGP---KPNVVTYNVLLSGLCRTGRMDETRALMDEMASHS 294

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + P+  TY+ L  G     + +    LF E +  GV     T + ++N  CKDGK+ K  
Sbjct: 295 MLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAK 354

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           ++ E+++  G+ P TV YN+L++G+C V  +  A  +F  M S+  R D  +YN LIN  
Sbjct: 355 QVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK + V  A  L  EM    + PSV T+NTL+      G L     ++  MQ   +  D 
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474

Query: 435 FTFATYIDGLCKNGFVLEAV---------------QVFQAI------------------- 460
            +F + +   CKNG + EAV               QV+ +I                   
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEK 534

Query: 461 -RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
            +N      I TYN L+ GLC+  ++  A +L + L+++G  PDVV+ +T+I   C +G 
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            DKA +LL +M      P+  T  TL+       +   +  L  +M
Sbjct: 595 TDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 222/430 (51%), Gaps = 3/430 (0%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D M+   P P + ++ +LL+ L +  + D   +L   + S+ + PD F  ++L + L + 
Sbjct: 253 DQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRT 312

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G +     +    L+        T + L+NGLC +G++ +A ++F+ L      P  V +
Sbjct: 313 GESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIY 372

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           NTLING C+ R+   A  +FE+M +      +PD +TYN++I+GLCK   V KA++L+++
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRH---IRPDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+   ++P+V T+N+LI  +      ++   +  +M   G++ DV++F +++   CK+GK
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +   +L+ MI + V P+   YNS++D +   G   +A  L   M + G    + +YN+
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNL 549

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L+   C+  ++++A  L   + ++ +RP V++YNT++S     G+   AL+L+ +M    
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P   T  T +  L   G V +   ++Q + +   E     Y  +++   +        
Sbjct: 610 IRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 669

Query: 490 KLFHRLQHKG 499
            L   +  KG
Sbjct: 670 SLKKEMSEKG 679



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 191/387 (49%), Gaps = 5/387 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E     D M      P   +++IL   L +  +  T++SLF      G+    +  ++L
Sbjct: 281 DETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSIL 340

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G  + A  V   ++ +   P TV +N LING C    +  A  +F+++     
Sbjct: 341 LNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI 400

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ +T+N LINGLC+      A  L  EM     +   P V T+N++ID     G ++K
Sbjct: 401 RPDHITYNALINGLCKLEMVTKAEDLVMEMEK---SGVDPSVETFNTLIDAYGTAGQLEK 457

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              +L  M+ + I  +VI++ S++  FC      EA  +  +M+   V P+   +N++I+
Sbjct: 458 CFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 517

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              + G  ++   L+E M   GV+   VTYN L+ G C   +I  A EL  ++ ++G R 
Sbjct: 518 AYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRP 577

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV SYN +I+A C     + A+ L +EM    IRP++ T +TL+S L   G + D   L 
Sbjct: 578 DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLY 637

Query: 423 DKMQLNDVVPDSFTFATYIDGL--CKN 447
            +M   +V P S  +   +D    C+N
Sbjct: 638 QQMLHKNVEPSSSIYGIMVDAYVRCEN 664


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 257/491 (52%), Gaps = 6/491 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF- 136
           SP   ++ IL+    +  + +  ++ F +L   GL  D+ + N L+   C+   T  A  
Sbjct: 112 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 171

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           ++L R       P+  +++ L+  LC +G+  +A  L + +      C P+VV + T+I+
Sbjct: 172 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVID 231

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
              +  +   A  LF+EMV        PD+VTY+S++  LCK   + KA+  L QM ++ 
Sbjct: 232 CFFKEGDVNKACDLFKEMVQRG---IPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + P+  TYN+LI G+     WKEA  +F EM  + + PDVVT N ++   CK GK+ +  
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEAR 348

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + M  +G NPD  +Y  +++G+   G +    +LF  M+  G   D+Y++++LI A 
Sbjct: 349 DVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAY 408

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
                ++ A+ ++ EM    ++P V+TY T+++ L ++G + DA++  ++M    V PD 
Sbjct: 409 ANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 468

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           + +   I G C +G +L+A ++   I N    L I  ++ +IN LCK+GR+  A  +F  
Sbjct: 469 YAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDL 528

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
             + G  PD V  S ++   C  G+M+KA  +   M +    P+ V + TL+ G+ +  +
Sbjct: 529 TVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGR 588

Query: 555 KSKVVVLLHKM 565
             + + L  +M
Sbjct: 589 IDEGLSLFREM 599



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 139/444 (31%), Positives = 232/444 (52%), Gaps = 3/444 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A  F   M+     P   ++  L+   +   Q+   V +FK +  + + PD+  LN+L
Sbjct: 275 GKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNML 334

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LCK G    A  V   +      P+  ++  ++NG   +G +++   LF  +     
Sbjct: 335 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGI 394

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++ TF+ LI           A+ +F EM +      KPDVVTY ++I  LC+ G +D 
Sbjct: 395 APDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHG---VKPDVVTYTTVIAALCRIGKMDD 451

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E   QM D+ + P+   Y+ LI GFC      +AK L +E+M+NG++ D+V F+++IN
Sbjct: 452 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIIN 511

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++     + +L +  G +PD V Y+ LMDG+CLVG++ +A  +F +MVS G   
Sbjct: 512 NLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 571

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V  Y  L+N  CK  ++++ + L+REML + I+PS I YN ++ GLF  G    A    
Sbjct: 572 NVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKF 631

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M  + +  +  T+   + G  KN    EA+ +F+ +R    ++ I T N +I G+ + 
Sbjct: 632 HEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 691

Query: 483 GRLKTACKLFHRLQHKGPIPDVVT 506
            R++ A  LF  +   G +P VVT
Sbjct: 692 RRVEEAKDLFASISRSGLVPCVVT 715



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 238/494 (48%), Gaps = 3/494 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + ++T ++    K    +    LFK +   G+ PDL   + +++ LCK      A  
Sbjct: 220 SPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEA 279

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            L +++     P+  T+N LI G  + G+  EA R+FK++   +  P+VVT N L+  LC
Sbjct: 280 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLC 339

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +      A  +F+ M  +      PDV +Y  +++G    G +    +L   M    I P
Sbjct: 340 KYGKIKEARDVFDTMAMKGQ---NPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAP 396

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           ++ T++ LI  +       +A  +F EM D+GV+PDVVT+  +I   C+ GKMD      
Sbjct: 397 DIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKF 456

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             MI +GV PD   Y+ L+ GFC  G + +A+EL + +++ G R D+  ++ +IN  CK 
Sbjct: 457 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKL 516

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            ++ DA  ++   ++    P  + Y+ L+ G   VG +  AL++ D M    + P+   +
Sbjct: 517 GRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 576

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T ++G CK G + E + +F+ +     +     YN +I+GL   GR   A   FH +  
Sbjct: 577 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTE 636

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G   +  T + ++    K    D+A  L  ++ A N     +T  T++ G  Q  +  +
Sbjct: 637 SGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 696

Query: 558 VVVLLHKMAAEKLV 571
              L   ++   LV
Sbjct: 697 AKDLFASISRSGLV 710



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 252/522 (48%), Gaps = 6/522 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF--PDLFVLNLLINCLCKMGITSGAF 136
           P + S++ILL  L    +      L + +   G    PD+     +I+C  K G  + A 
Sbjct: 184 PDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKAC 243

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +   +++    P+ VT++ +++ LC    + +A    +++      P+  T+N LI G 
Sbjct: 244 DLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGY 303

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
             T     A+++F+EM         PDVVT N ++  LCK G + +A+++   M  +  N
Sbjct: 304 SSTGQWKEAVRVFKEMRRHS---ILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQN 360

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+V +Y  ++ G+       +   LF  M+ +G+ PD+ TF+ +I      G +DK   +
Sbjct: 361 PDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMII 420

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M   GV PD VTY +++   C +G++  A E F  M+ +G   D Y+Y+ LI   C 
Sbjct: 421 FNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 480

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
              +  A  L  E+++  +R  ++ ++++++ L ++G + DA  + D        PD+  
Sbjct: 481 HGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVV 540

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++  +DG C  G + +A++VF A+ +   E  +  Y  L+NG CK+GR+     LF  + 
Sbjct: 541 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREML 600

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG  P  +  + +I  L   G+   A     +M       ++ T+  +LRGF +N    
Sbjct: 601 QKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFD 660

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           + + L  ++ A  + +  ++L++ +  +  + ++  E  + F
Sbjct: 661 EAIFLFKELRAMNVKIDIITLNTMIAGMF-QTRRVEEAKDLF 701


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/455 (30%), Positives = 246/455 (54%), Gaps = 3/455 (0%)

Query: 95  KQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTF 154
           K+ D     F  +   G+ P +   N +++   K   T  A+V+   + R     + VTF
Sbjct: 135 KRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTF 194

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N +IN LC EG++ +A      +      PNVVT+NT+I+G C +R  +   ++  +++ 
Sbjct: 195 NIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYC-SRGRVEGARMIFDLMK 253

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
             G   KPD  TY S I G+CK+G +++A  +L +MK+  + P  +TYN+LI G+C   +
Sbjct: 254 CRGV--KPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
            + A     +M+  G+ P V T+N +I+    D KMD+ + +++ M ++G+ PD+VTYN 
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++G+C  G + +A  L   M+SKG +    +Y  LI    K  +++ A  L+ +++ + 
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I P +I +N L+ G    GN+  A  ++ +M    VVPD  TF T + G C+ G V  A 
Sbjct: 432 IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAR 491

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           ++ + +++   +    +YN LI+G  K G +K A ++   +   G  P ++T + +I  L
Sbjct: 492 ELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGL 551

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           CK  + D A  LL +M +K   P++ T+ +L+ G 
Sbjct: 552 CKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 225/455 (49%), Gaps = 3/455 (0%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           +LLI   C++     AF     +      P+    N +++      R  +A  L+ ++  
Sbjct: 125 DLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFR 184

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
                +VVTFN +IN LC+    L   K F  ++   G   KP+VVTYN+II G C  G 
Sbjct: 185 MRIKSSVVTFNIMINVLCK-EGKLKKAKEFIGLMEALG--IKPNVVTYNTIIHGYCSRGR 241

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           V+ A+ +   MK R + P+  TY S I G C     +EA  +  +M + G++P  VT+N 
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  C  G ++      + M++ G+ P   TYN L+    L  ++  A  +   M  KG
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              D  +YNILIN  C+   V+ A  L+ EM+S+ I+P+ +TY +L+  L + G +  A 
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L +K+    + PD   F   IDG C NG +  A  + + +   K      T+N L+ G 
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGR 481

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C+ G+++ A +L   ++ +G  PD ++ +T+I    K G M  A  +  +M +    P+ 
Sbjct: 482 CREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTL 541

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           +T+  L++G  +N +      LL +M ++ +  +D
Sbjct: 542 LTYNALIQGLCKNEEGDHAEQLLKEMISKGITPND 576



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 208/415 (50%), Gaps = 32/415 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A   +  M +M+    + +F I++ +L K  +          + + G+ P++   N 
Sbjct: 172 TEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNT 231

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+  C  G   GA ++   +      P++ T+   I+G+C EG++ EA+ + +K+    
Sbjct: 232 IIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIG 291

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMV------------------------NEFG 217
             P  VT+NTLI+G C   N  +A    ++MV                        +E  
Sbjct: 292 LRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEAD 351

Query: 218 AICK--------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            I K        PD VTYN +I+G C+ G V KA  L  +M  + I P  +TY SLI   
Sbjct: 352 GIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVL 411

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
                 K+A  LF +++  G+ PD++ FNA+I+ +C +G MD+   +L+ M Q  V PD 
Sbjct: 412 SKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDE 471

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VT+N+LM G C  G++  AREL   M S+G + D  SYN LI+   K   ++DA  +  E
Sbjct: 472 VTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDE 531

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
           MLS    P+++TYN L+ GL +      A +L+ +M    + P+  T+ + I+G+
Sbjct: 532 MLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 205/428 (47%), Gaps = 39/428 (9%)

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           ++F E+    G +     V Y+ +I   C+    D A E    MK + + P+V   N ++
Sbjct: 104 EVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDML 163

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
             F   +  ++A  L+ EM    ++  VVTFN MIN  CK+GK+ K    + LM   G+ 
Sbjct: 164 SLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIK 223

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P+ VTYN+++ G+C  GR+  AR +F  M  +G + D Y+Y   I+  CK+ K+E+A  +
Sbjct: 224 PNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGM 283

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNL------------------------------- 415
             +M    +RP+ +TYNTL+ G    GNL                               
Sbjct: 284 LEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFL 343

Query: 416 ----GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
                +A  +I +M    +VPDS T+   I+G C+ G V +A  +   + +   +    T
Sbjct: 344 DCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVT 403

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y  LI  L K GR+K A  LF ++  KG  PD++  + +I   C  G MD+A  +L +M+
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
               VP EVTF TL++G  +  K      L+ +M +  +    +S ++    L+S   K 
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNT----LISGYSKR 519

Query: 592 RECLNQFR 599
            +  + FR
Sbjct: 520 GDMKDAFR 527



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 180/348 (51%), Gaps = 3/348 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A   FD M      P   ++   ++ + K  + +    + +++   GL P     N LI+
Sbjct: 245 ARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLID 304

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C  G    AF    +++R    P   T+N LI+ L  + ++ EA  + K+++     P
Sbjct: 305 GYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVP 364

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + VT+N LING CR  N   A  L +EM+++     +P  VTY S+I  L K G + +A 
Sbjct: 365 DSVTYNILINGYCRCGNVKKAFTLHDEMISKG---IQPTRVTYTSLIYVLSKRGRMKQAD 421

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L  ++  + I P++I +N+LI G C   +   A  +  EM    V PD VTFN ++   
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGR 481

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C++GK++    L+E M  RG+ PD ++YN+L+ G+   G +  A  +   M+S G    +
Sbjct: 482 CREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTL 541

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
            +YN LI   CK+++ + A  L +EM+S+ I P+  TY +L+ G+  V
Sbjct: 542 LTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNV 589



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 158/308 (51%), Gaps = 1/308 (0%)

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           V ++ +I   C+  + D      ++M  +GV P     N ++  F    R  +A  L+  
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M     +  V ++NI+IN  CK+ K++ A      M +  I+P+V+TYNT++ G    G 
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A  + D M+   V PDS+T+ ++I G+CK G + EA  + + ++         TYN 
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI+G C  G L+ A     ++  +G +P V T + +IH L  + +MD+A+ ++ +M  K 
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            VP  VT+  L+ G+ +     K   L  +M ++ +  + ++ +S ++ +LSK  + ++ 
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTS-LIYVLSKRGRMKQA 420

Query: 595 LNQFRHLL 602
            + F  ++
Sbjct: 421 DDLFEKIV 428



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 123/231 (53%), Gaps = 5/231 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    +N   + GN+   +A    D MI     P   ++T L+ +L+K  +      
Sbjct: 365 DSVTYNILINGYCRCGNV--KKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADD 422

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF+++   G+FPDL + N LI+  C  G    AF +L  + +    P+ VTFN L+ G C
Sbjct: 423 LFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRC 482

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            EG++  A  L +++      P+ +++NTLI+G  +  +   A ++ +EM++  G    P
Sbjct: 483 REGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLS-IG--FNP 539

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
            ++TYN++I GLCK+   D A++LL +M  + I PN  TY SLI G   V+
Sbjct: 540 TLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNVE 590


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 289/554 (52%), Gaps = 31/554 (5%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           H+ G ++     + +  M+  + +P   +F +L+  L +++ +D  + LF+++   G  P
Sbjct: 129 HRPGFVS-----WLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCP 183

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           + F L +L+  LC+ G+   A  ++     SC   N V +N L++  C E    EA RL 
Sbjct: 184 NEFTLGILVRGLCRAGLVKQALELVNNN-NSCRIANRVVYNTLVSRFCREEMNNEAERLV 242

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV--NEFGAICKPDVVTYNSIID 232
           +++N     P+VVTFN+ I+ LCR    + A ++F +M    E G + +P+VVT+N ++ 
Sbjct: 243 ERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELG-LPRPNVVTFNLMLK 301

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G CK G +  A+ L+  MK      ++  YN  + G     +  EA+ +  EM+  G++P
Sbjct: 302 GFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEP 361

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +  T+N M++  C++  +     L++LM++ GV PDTV Y++L+ G+C  G++  A+ + 
Sbjct: 362 NAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVL 421

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M+  GC+ + Y+ N L+++  K+ +  +A  + ++M  +  +P  +T N +++GL + 
Sbjct: 422 HEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRN 481

Query: 413 GNLGDALKLIDKMQLNDVVPDSF----TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           G L  A +++ +M  N   P S     +FA+ I+ +               + NC  +  
Sbjct: 482 GELDKASEIVSEMWTNG--PTSLDKGNSFASLINSI-------------HNVSNCLPD-- 524

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
             TY  LINGLCK+GRL+ A K F  +  K   PD VT  T I   CK+G++  A  +L 
Sbjct: 525 GITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLK 584

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           DME   C  +  T+  L+ G   NN+  ++  L  +M  EK +  D+   + ++  L + 
Sbjct: 585 DMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEM-KEKGISPDICTYNNIITCLCEG 643

Query: 589 KKYRECLNQFRHLL 602
            K ++ ++    +L
Sbjct: 644 GKAKDAISLLHEML 657



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 235/476 (49%), Gaps = 38/476 (7%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCF---TPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           ++  L ++G    A     + LR+ F   +P+   +N L+       R    + L+  + 
Sbjct: 84  MVRVLAQLGHVDDAITHF-KSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDML 142

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                P   TFN LI+ LC +R    AL+LFE+M  +    C P+  T   ++ GLC+ G
Sbjct: 143 AARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKG---CCPNEFTLGILVRGLCRAG 199

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V +A EL+       I  N + YN+L+  FC  +   EA+ L   M + GV PDVVTFN
Sbjct: 200 LVKQALELVNNNNSCRI-ANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFN 258

Query: 299 AMINYNCKDGKMDKVNRL---LELMIQRGV-NPDTVTYNSLMDGFCLVGRISRARELFVS 354
           + I+  C+ GK+ + +R+   +++  + G+  P+ VT+N ++ GFC  G +  AR L  +
Sbjct: 259 SRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVET 318

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M   G    +  YNI +    ++ ++ +A  +  EM+++ I P+  TYN ++ GL +   
Sbjct: 319 MKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHM 378

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L DA  L+D M  N V PD+  ++T + G C  G V EA  V   +    C+    T N 
Sbjct: 379 LSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNT 438

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM---- 530
           L++ L K GR   A ++  ++  K   PD VTC+ +++ LC+ G++DKA++++ +M    
Sbjct: 439 LLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNG 498

Query: 531 ------------------EAKNCVPSEVTFCTLLRGFVQ----NNKKSKVVVLLHK 564
                                NC+P  +T+ TL+ G  +       K K + +L K
Sbjct: 499 PTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAK 554



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 237/486 (48%), Gaps = 28/486 (5%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A    + M K+     +  + I L  L +N +      +   + + G+ P+ +  N+++
Sbjct: 311 DARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMM 370

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC+  + S A  ++  ++R+   P+TV ++ L++G C+ G++ EA  +  ++    C 
Sbjct: 371 DGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQ 430

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC-KPDVVTYNSIIDGLCKDGFVDK 242
           PN  T NTL++ L +   TL A    EEM+ +    C +PD VT N +++GLC++G +DK
Sbjct: 431 PNTYTCNTLLHSLWKEGRTLEA----EEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDK 486

Query: 243 AKELLLQMKD----------------------RNINPNVITYNSLICGFCCVDDWKEAKC 280
           A E++ +M                         N  P+ ITY +LI G C V   +EAK 
Sbjct: 487 ASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKK 546

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            FIEM+   ++PD VT++  I   CK GK+    R+L+ M + G +    TYN+L+ G  
Sbjct: 547 KFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLG 606

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
              +I     L   M  KG   D+ +YN +I   C+  K +DA+ L  EML + I P+V 
Sbjct: 607 SNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVS 666

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           ++  L+    +  +   A +L + + LN        ++   + L   G + EA ++F+  
Sbjct: 667 SFKILIKAFSKSSDFKVACELFE-VALNICGRKEALYSLMFNELLAGGQLSEAKELFEVS 725

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            +    L+   Y  LI  LC+  RL  A  L ++L  KG   D  +   +I  L K G  
Sbjct: 726 LDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNK 785

Query: 521 DKANDL 526
            +A++L
Sbjct: 786 RQADEL 791



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 215/451 (47%), Gaps = 20/451 (4%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D M+     P   ++ I++  L +N        L   +  NG++PD    + L+
Sbjct: 346 EARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLL 405

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C  G    A  VL  ++R+   PNT T N L++ L  EGR +EA  + +K+N     
Sbjct: 406 HGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQ 465

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMV----------NEFGAI---------CKPDV 224
           P+ VT N ++NGLCR      A ++  EM           N F ++         C PD 
Sbjct: 466 PDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDG 525

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           +TY ++I+GLCK G +++AK+  ++M  +N+ P+ +TY++ I  FC       A  +  +
Sbjct: 526 ITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKD 585

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M  NG    + T+NA+I     + ++ ++  L + M ++G++PD  TYN+++   C  G+
Sbjct: 586 MERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGK 645

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
              A  L   M+ KG   +V S+ ILI A  K    + A  L+   L+   R   + Y+ 
Sbjct: 646 AKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL-YSL 704

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           + + L   G L +A +L +      +   +F +   I  LC++  + +A  +   + +  
Sbjct: 705 MFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKG 764

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRL 495
                 ++  +I+GL K G  + A +L  R+
Sbjct: 765 YGFDHASFMPVIDGLSKRGNKRQADELAKRM 795



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 118/284 (41%), Gaps = 37/284 (13%)

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
           N +   PD      LIN LCK+G    A      +L     P++VT++  I   C +G+I
Sbjct: 517 NVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKI 576

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
             A R+ K +    C   + T+N LI GL           L +EM  E G    PD+ TY
Sbjct: 577 SSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEM-KEKG--ISPDICTY 633

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK----------- 276
           N+II  LC+ G    A  LL +M D+ I+PNV ++  LI  F    D+K           
Sbjct: 634 NNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALN 693

Query: 277 -----------------------EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
                                  EAK LF   +D  +      +  +I   C+D ++   
Sbjct: 694 ICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADA 753

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N LL  +I +G   D  ++  ++DG    G   +A EL   M+ 
Sbjct: 754 NSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMME 797



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 12/283 (4%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG +    +N   K G +   EA   F  M+     P   ++   +    K  +  +   
Sbjct: 524 DGITYTTLINGLCKVGRL--EEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFR 581

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG---RILRSCFTPNTVTFNFLIN 159
           + K +  NG    L   N LI     +G  +  F + G    +     +P+  T+N +I 
Sbjct: 582 VLKDMERNGCSKTLQTYNALI---LGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIIT 638

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
            LC  G+  +A  L  ++      PNV +F  LI    ++ +  VA +LFE  +N    I
Sbjct: 639 CLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALN----I 694

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C      Y+ + + L   G + +AKEL     DR +      Y  LI   C  +   +A 
Sbjct: 695 CGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADAN 754

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            L  +++D G   D  +F  +I+   K G   + + L + M++
Sbjct: 755 SLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMME 797


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 162/530 (30%), Positives = 269/530 (50%), Gaps = 19/530 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLN---SNGLFPDLFVL 119
            EA    D +  ++ +    S+  +LT L +   +D   +L + ++        P+    
Sbjct: 62  GEATSLLDALPSVRDA---VSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSY 118

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
            +L+  LC   +   A  +L  +  +    + VT+  LI GLC    + +A  L  ++  
Sbjct: 119 TVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE 178

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
              +PNVV +++L+ G C++       K+F EM +E G   +PDVV Y  +ID LCK G 
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM-SEKG--IEPDVVMYTGLIDSLCKVGK 235

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
             KA  ++  M  R + PNV+TYN LI   C     KEA  +  +M + GV PDVVT+N 
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295

Query: 300 MINYNCKDGKMDKVNRLLELMIQRG---VNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +I       +MD+   LLE M+ RG   V P+ VT+NS++ G C +GR+ +A ++   M 
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             GC  ++ +YN+LI    +  KV  A+ L  EM S  + P   TY+ L+ G  ++  + 
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A  L+  M+   + P+ F +   +  +C+ G +  A  +F  + N    L +  Y+ +I
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMI 473

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G CK G LKTA +L   +  +G  PD VT S +I+   K G M+ AN +L  M A   +
Sbjct: 474 HGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFL 533

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           P    F +L++G+    + +KV+ L+ +M     +  +++L SK++  LS
Sbjct: 534 PDVAVFDSLIQGYSTKGEINKVLELIREM-----ITKNIALDSKIISTLS 578



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 249/492 (50%), Gaps = 6/492 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   S+T+L+  L  ++  D  V L + + S G+  D+     LI  LC       A  +
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +G +  S   PN V ++ L+ G C  GR  +  ++F +++    +P+VV +  LI+ LC+
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  + + MV       +P+VVTYN +I+ +CK+G V +A  +L +M ++ + P+
Sbjct: 233 VGKAKKAHGVMDMMVRRG---LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMM--DNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           V+TYN+LI G   V +  EA  L  EM+   N V+P+VVTFN++I   C  G+M +  ++
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
             +M + G   + VTYN L+ G   V ++ +A EL   M S G   D ++Y+ILI   CK
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             +V+ A  L   M    I P +  Y  LL  + + G +  A  L ++M  N+   D   
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVA 468

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++T I G CK G +  A ++ ++I +        TY+ +IN   K G ++ A  +  ++ 
Sbjct: 469 YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMT 528

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G +PDV    ++I     +G+++K  +L+ +M  KN         TL    V +N+  
Sbjct: 529 ASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGK 588

Query: 557 KVVVLLHKMAAE 568
            ++  L   +AE
Sbjct: 589 ALLQSLPDFSAE 600



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 179/360 (49%), Gaps = 7/360 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A    D M++    P + ++ +L+  + K       + + K+++  G+ PD+   N 
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295

Query: 122 LINCLCKMGITSGAFVVLGRILRS--CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           LI  L  +     A  +L  ++R      PN VTFN +I GLC  GR+ +A ++   +  
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE 355

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             C  N+VT+N LI GL R      A++L +EM +  G   +PD  TY+ +I G CK   
Sbjct: 356 TGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS-LG--LEPDSFTYSILIKGFCKMWQ 412

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           VD+A++LL  M+DR I P +  Y  L+   C     + A+ LF EM DN    DVV ++ 
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYST 471

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           MI+  CK G +     LL+ ++  G+ PD VTY+ +++ F   G +  A  +   M + G
Sbjct: 472 MIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASG 531

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              DV  ++ LI       ++   + L REM+++ I       +TL + L    N G AL
Sbjct: 532 FLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLV-ASNEGKAL 590


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 265/534 (49%), Gaps = 39/534 (7%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++  L+  L K    +    LF  +   G+ PD+   N LI    K+     A+ +L  I
Sbjct: 374 TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI 433

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
            +   T N      ++NGLC  G +  A  LF+++  +   PN+V + T++ GL +    
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A+K+   M ++      PDV  YN++I G CK G +++ K  L++M  + + PNV TY
Sbjct: 494 EEAIKILGVMKDQG---LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTY 550

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            + I G+C   + + A+  FIEM+D+G+ P+ V    +I+  CKDG   K       M+ 
Sbjct: 551 GAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLD 610

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +GV PD  T++ L+ G    G++  A  +F  ++ KG   DV++Y  LI+  CK+  ++ 
Sbjct: 611 QGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKA 670

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVG----------------------------- 413
           A  L+ +M  + I P+++TYN L++GL ++G                             
Sbjct: 671 AFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIA 730

Query: 414 ------NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
                 NL +A +L   M+L  V PDSF +   IDG CK G   +A+ +F  +   +   
Sbjct: 731 GYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVE-EGIA 789

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
               +N LI+G  K+G+L  A +L   +      P+ VT + +I + C  G + +A  L 
Sbjct: 790 STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLF 849

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           ++M+ +N +P+ +T+ +LL G+ +  ++S++  L  +M A  +   DL+ S  V
Sbjct: 850 MEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMV 903



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 252/487 (51%), Gaps = 3/487 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++++++  L +    D  + L + + + GL PD ++   LI+  C+   ++    +
Sbjct: 265 PNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +      P+ V +  LING   +  I  A ++ +++       N  T+  LI+GLC+
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCK 384

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   A  LF EM        KPD+ TYN +I+G  K   ++KA ELL+++K  N+  N
Sbjct: 385 IGDLEKAEDLFSEMTM---MGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTAN 441

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
                +++ G C   D   A  LF EM+  G++P++V +  ++    K+G+ ++  ++L 
Sbjct: 442 AYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILG 501

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           +M  +G++PD   YN+++ GFC  G++   +   V M++KG + +VY+Y   I+  C+  
Sbjct: 502 VMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAG 561

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +++ A   + EML   I P+ +    L+ G  + GN   A      M    V+PD  T +
Sbjct: 562 EMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHS 621

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I GL KNG + EA+ VF  + +      + TY  LI+ LCK G LK A +L   +  K
Sbjct: 622 VLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK 681

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P++VT + +I+ LCK G++ KA +L   +  K    + VT+ T++ G+ ++   ++ 
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEA 741

Query: 559 VVLLHKM 565
             L H M
Sbjct: 742 FQLFHGM 748



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 257/512 (50%), Gaps = 7/512 (1%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            F  MI     P +  +T ++  L K  +++  + +   +   GL PD+F  N +I   C
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G        L  ++     PN  T+   I+G C  G +  A R F ++      PN V
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
               LI+G C+  NT  A   F  M+++ G +  PDV T++ +I GL K+G + +A  + 
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQ-GVL--PDVQTHSVLIHGLSKNGKLQEAMGVF 640

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            ++ D+ + P+V TY SLI   C   D K A  L  +M   G+ P++VT+NA+IN  CK 
Sbjct: 641 SELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKL 700

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G++ K   L + + ++G+  ++VTY++++ G+C    ++ A +LF  M   G   D + Y
Sbjct: 701 GEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVY 760

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             LI+  CK    E A+ L+  M+ E I  S   +N L+ G F++G L +A +L++ M  
Sbjct: 761 CALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVD 819

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           N + P+  T+   I+  C  G + EA Q+F  ++       + TY  L++G  ++GR   
Sbjct: 820 NHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSE 879

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
              LF  +  +G  PD +  S M+    KEG   KA  L+ DM ++     +  +  L+ 
Sbjct: 880 MFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILID 939

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
              ++N  S+V+ +L ++  +    S LSL++
Sbjct: 940 ALCKHNNLSEVLKVLDEVEKQG---SKLSLAT 968



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 236/501 (47%), Gaps = 4/501 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F IL+ +  K    +  VS+F    +N     L   N L   L K G     F  + + +
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLK-GNRVELFWKVYKGM 224

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                P+  T+  LIN  C  G++ E   +   +    C PN+VT++ +I GLCR  +  
Sbjct: 225 LGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVD 284

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            AL+L   M N+ G +  PD   Y ++IDG C+     + K +L +M    + P+ + Y 
Sbjct: 285 EALELKRSMANK-GLL--PDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYT 341

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI GF    D   A  +  EM    ++ +  T+ A+I+  CK G ++K   L   M   
Sbjct: 342 ALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM 401

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD  TYN L++G+  V  + +A EL + +  +    + Y    ++N  C    +  A
Sbjct: 402 GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRA 461

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L++EM+S  ++P+++ Y T++ GL + G   +A+K++  M+   + PD F + T I G
Sbjct: 462 NELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIG 521

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK G + E       +     +  + TY   I+G C+ G ++ A + F  +   G  P+
Sbjct: 522 FCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPN 581

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            V C+ +I   CK+G   KA      M  +  +P   T   L+ G  +N K  + + +  
Sbjct: 582 DVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFS 641

Query: 564 KMAAEKLVVSDLSLSSKVVDL 584
           ++  + LV    + +S + +L
Sbjct: 642 ELLDKGLVPDVFTYTSLISNL 662



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 210/405 (51%), Gaps = 6/405 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN T  +A   F CM+     P + + ++L+  L+KN +    + +F  L   GL PD
Sbjct: 594 KDGNTT--KAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPD 651

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F    LI+ LCK G    AF +   + +    PN VT+N LINGLC  G I +A  LF 
Sbjct: 652 VFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFD 711

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +       N VT++T+I G C++ N   A +LF  M    G    PD   Y ++IDG C
Sbjct: 712 GIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM-KLVGV--PPDSFVYCALIDGCC 768

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G  +KA  L L M +  I  +   +N+LI GF  +    EA  L  +M+DN + P+ V
Sbjct: 769 KAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHV 827

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I Y+C  G + +  +L   M +R V P+ +TY SL+ G+  +GR S    LF  M
Sbjct: 828 TYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEM 887

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V++G + D  +++++++A+ K+     A+ L  +MLSE +      Y  L+  L +  NL
Sbjct: 888 VARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNL 947

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            + LK++D+++         T  T +    + G   EA++V +++
Sbjct: 948 SEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 146/562 (25%), Positives = 273/562 (48%), Gaps = 43/562 (7%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDT--VVSLFKRLNSNGLFP-DLFVLNLLINCLCK 128
           +I+  P P   +  ++  ++ +N+  D   +   F  +NS  +F  +L   ++L   LC 
Sbjct: 60  LIESSPLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCN 119

Query: 129 MGITSGAFVVLGRILRS-------------CFTP--------NTVTFNFLINGLCAEGRI 167
            G+   A  VL R++ +             C+          + V F  LI+    +G +
Sbjct: 120 SGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFL 179

Query: 168 MEAARLF--KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
            EA  +F   K N F     +   N+L   L +     +  K+++ M+   GAI  PDV 
Sbjct: 180 NEAVSVFLGAKTNEFIV--GLACCNSLSKDLLKGNRVELFWKVYKGML---GAIV-PDVY 233

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TY ++I+  C+ G V++ K +L  M+++   PN++TY+ +I G C   D  EA  L   M
Sbjct: 234 TYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSM 293

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
            + G+ PD   +  +I+  C+  +  +   +L+ M   G+ PD V Y +L++GF     I
Sbjct: 294 ANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDI 353

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A ++   M ++  + + ++Y  LI+  CK   +E A  L+ EM    I+P + TYN L
Sbjct: 354 GGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCL 413

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + G ++V N+  A +L+ +++  ++  +++     ++GLC  G +  A ++FQ + +   
Sbjct: 414 IEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGL 473

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +  I  Y  ++ GL K GR + A K+   ++ +G  PDV   +T+I   CK G+M++   
Sbjct: 474 KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKS 533

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGF-----VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
            L++M AK   P+  T+   + G+     +Q  ++S + +L   +A   ++ +DL     
Sbjct: 534 YLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDL----- 588

Query: 581 VVDLLSKDKKYRECLNQFRHLL 602
            +D   KD    +   +FR +L
Sbjct: 589 -IDGYCKDGNTTKAFAKFRCML 609



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 213/459 (46%), Gaps = 39/459 (8%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI     P + ++   +    +  +       F  +  +G+ P+  +   LI+  CK G 
Sbjct: 538 MIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGN 597

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T+ AF     +L     P+  T + LI+GL   G++ EA  +F +L      P+V T+ +
Sbjct: 598 TTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTS 657

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+ LC+  +   A +L ++M  +      P++VTYN++I+GLCK G + KA+EL   + 
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKG---INPNIVTYNALINGLCKLGEIAKARELFDGIP 714

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           ++ +  N +TY+++I G+C   +  EA  LF  M   GV PD   + A+I+  CK G  +
Sbjct: 715 EKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTE 774

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K   L   M++ G+   T  +N+L+DGF  +G++  A +L   MV      +  +Y ILI
Sbjct: 775 KALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILI 833

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG------------------ 413
             +C    +++A  L+ EM    + P+V+TY +LL G  ++G                  
Sbjct: 834 EYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIK 893

Query: 414 -----------------NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
                            N   ALKL+D M    V      +   ID LCK+  + E ++V
Sbjct: 894 PDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKV 953

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
              +     +L + T   L+    + GR   A ++   +
Sbjct: 954 LDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 164/535 (30%), Positives = 260/535 (48%), Gaps = 43/535 (8%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+  L +++ ++   S ++++     F +   L+ L+ C  +M  T  AF VL  +L+  
Sbjct: 78  LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F  N    N L+ GLC      +A  L +++   +  P+V ++NT+I G C  +    AL
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +L  EM    G+ C   +VT+  +ID  CK G +D+A   L +MK   +  +++ Y SLI
Sbjct: 198 ELANEMK---GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            GFC   +    K LF E+++ G  P  +T+N +I   CK G++ + + + E MI+RGV 
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P+  TY  L+DG C VG+   A +L   M+ K    +  +YNI+IN  CKD  V DAV +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND---VVPDSFTFATYIDG 443
              M   R RP  ITYN LL GL   G+L +A KL+  + L D     PD  ++   I G
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL-YLMLKDSSYTDPDVISYNALIHG 433

Query: 444 LCKN-----------------------------------GFVLEAVQVFQAIRNCKCELR 468
           LCK                                    G V +A+++++ I + K    
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
            +TY  +I+G CK G L  A  L  +++     P V   + ++  LCKEG +D+A  L  
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           +M+  N  P  V+F  ++ G ++         LL  M+   L   DL   SK+++
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL-SPDLFTYSKLIN 607



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 152/496 (30%), Positives = 247/496 (49%), Gaps = 5/496 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+K   +  + +  ILL  L +N +    VSL + +  N L PD+F  N +I   C+   
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   +  S  + + VT+  LI+  C  G++ EA    K++     + ++V + +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI G C          LF+E++    + C    +TYN++I G CK G + +A E+   M 
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPC---AITYNTLIRGFCKLGQLKEASEIFEFMI 309

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           +R + PNV TY  LI G C V   KEA  L   M++   +P+ VT+N +IN  CKDG + 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV--SKGCRHDVYSYNI 369
               ++ELM +R   PD +TYN L+ G C  G +  A +L   M+  S     DV SYN 
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+  CK+ ++  A+ +Y  ++ +      +T N LL+   + G++  A++L  ++  + 
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           +V +S T+   IDG CK G +  A  +   +R  + +  +  YNCL++ LCK G L  A 
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           +LF  +Q     PDVV+ + MI    K G +  A  LL+ M      P   T+  L+  F
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609

Query: 550 VQNNKKSKVVVLLHKM 565
           ++     + +    KM
Sbjct: 610 LKLGYLDEAISFFDKM 625



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 237/471 (50%), Gaps = 5/471 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           S  + ++ IL+    K  + D  +   K +   GL  DL V   LI   C  G       
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   +L    +P  +T+N LI G C  G++ EA+ +F+ +      PNV T+  LI+GLC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
               T  AL+L   M+ +     +P+ VTYN II+ LCKDG V  A E++  MK R   P
Sbjct: 329 GVGKTKEALQLLNLMIEKDE---EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 258 NVITYNSLICGFCCVDDWKEA-KCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNR 315
           + ITYN L+ G C   D  EA K L++ + D+    PDV+++NA+I+  CK+ ++ +   
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           + +L++++    D VT N L++     G +++A EL+  +       +  +Y  +I+  C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K   +  A  L  +M    ++PSV  YN LLS L + G+L  A +L ++MQ ++  PD  
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           +F   IDG  K G +  A  +   +        + TY+ LIN   K+G L  A   F ++
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
              G  PD   C +++ +   +G+ DK  +L+  +  K+ V  +   CT++
Sbjct: 626 VDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVM 676



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 195/384 (50%), Gaps = 5/384 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F+ MI+    P + ++T L+  L    +    + L   +      P+    N++I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFA 181
           N LCK G+ + A  ++  + +    P+ +T+N L+ GLCA+G + EA++L   +  +   
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            DP+V+++N LI+GLC+      AL +++ +V + GA    D VT N +++   K G V+
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA---GDRVTTNILLNSTLKAGDVN 476

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA EL  Q+ D  I  N  TY ++I GFC       AK L  +M  + +QP V  +N ++
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK+G +D+  RL E M +    PD V++N ++DG    G I  A  L V M   G  
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+++Y+ LIN   K   +++A+  + +M+     P     +++L      G      +L
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTEL 656

Query: 422 IDKMQLNDVVPDSFTFATYIDGLC 445
           + K+   D+V D     T +D +C
Sbjct: 657 VKKLVDKDIVLDKELTCTVMDYMC 680



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 1/206 (0%)

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           ++  A  +F   V  G     ++ N L+    + +  E A   YR+ML      + ++ +
Sbjct: 53  QLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            LL    Q+   G A  ++  M       + +     + GLC+N    +AV + + +R  
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                + +YN +I G C+   L+ A +L + ++  G    +VT   +I   CK G+MD+A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGF 549
              L +M+        V + +L+RGF
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGF 257


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 132/397 (33%), Positives = 226/397 (56%), Gaps = 6/397 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA++ +    KM   P M +  ++L  L K  ++DT+  ++  + + G  P++     L
Sbjct: 143 EEALWVY---YKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTL 199

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C+ G    AF +   ++     P  V +  LI GLC E RI EA  +F+ +     
Sbjct: 200 IDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+NT+++G C+  +   AL+L++EM+ + G +  P+VVT+  +IDGLCK   +  
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGD-GLL--PNVVTFGILIDGLCKTDEMVS 316

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++ L+ M    + PN+  YN LI G+C   +  EA  L  E+  + + PDV T++ +I 
Sbjct: 317 ARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIK 376

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   +M++ + LL+ M ++G  P+ VTYN+L+DG+C  G + +A E+   M  KG   
Sbjct: 377 GLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP 436

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++ +++ LI+  CK  K+E A+ LY EM+ + + P V+ Y  L+ G F+ GN  +A +L 
Sbjct: 437 NIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLH 496

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            +MQ   + P+ FT +  IDGLCK+G + +A+++F A
Sbjct: 497 KEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/430 (32%), Positives = 229/430 (53%), Gaps = 8/430 (1%)

Query: 99  TVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLI 158
           +V ++  RL S+   P++F   +LI    +MG+   A  V  ++      P     N ++
Sbjct: 111 SVFNVLSRLESSKFTPNVF--GVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVL 165

Query: 159 NGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
           +GL  +GR     +++  +      PNVVT+ TLI+G CR  + L A +LF+EM+ +   
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK--- 222

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
              P VV Y  +I GLC +  + +A+ +   M++  + PN+ TYN+++ G+C +   K+A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             L+ EM+ +G+ P+VVTF  +I+  CK  +M    + L  M   GV P+   YN L+DG
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C  G +S A  L   +       DV++Y+ILI   C   ++E+A  L +EM  +   P+
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            +TYNTL+ G  + GN+  A+++  +M    + P+  TF+T IDG CK G +  A+ ++ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +        +  Y  LI+G  K G  K A +L   +Q  G  P+V T S +I  LCK+G
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522

Query: 519 QMDKANDLLL 528
           ++  A  L L
Sbjct: 523 RISDAIKLFL 532



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 244/477 (51%), Gaps = 16/477 (3%)

Query: 91  LAKNKQ-YDTVVSLFKRLNSNGLFPDLF-VLNLLINCLC---KMGITSGAFVVLGRILRS 145
           LAKN Q Y  ++ +   L    L+     ++  LI CL    +  I    F VL R+  S
Sbjct: 66  LAKNPQLYSAIIHV---LTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLESS 122

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
            FTPN   F  LI      G + EA  ++ K++V    P +   N +++GL +       
Sbjct: 123 KFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTM 177

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
            K++ +MV   GA   P+VVTY ++IDG C+ G   KA  L  +M ++ I P V+ Y  L
Sbjct: 178 WKVYGDMVAR-GA--SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTIL 234

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G C      EA+ +F  M ++G+ P++ T+N M++  CK   + K   L + M+  G+
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P+ VT+  L+DG C    +  AR+  + M S G   +++ YN LI+  CK   + +A+ 
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS 354

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L+ E+    I P V TY+ L+ GL  V  + +A  L+ +M+    +P++ T+ T IDG C
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G + +A++V   +     E  I T++ LI+G CK G+++ A  L+  +  KG +PDVV
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVV 474

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
             + +I    K+G   +A  L  +M+     P+  T   L+ G  ++ + S  + L 
Sbjct: 475 AYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 158/297 (53%), Gaps = 3/297 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G    +EA   F  M      P + ++  ++    K       + L++ +  +GL P++ 
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVV 299

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
              +LI+ LCK      A   L  +      PN   +N LI+G C  G + EA  L  ++
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P+V T++ LI GLC       A  L +EM  + G +  P+ VTYN++IDG CK+
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK-GFL--PNAVTYNTLIDGYCKE 416

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G ++KA E+  QM ++ I PN+IT+++LI G+C     + A  L+ EM+  G+ PDVV +
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            A+I+ + KDG   +  RL + M + G++P+  T + L+DG C  GRIS A +LF++
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 127/544 (23%), Positives = 226/544 (41%), Gaps = 70/544 (12%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN++  EA+     + K +  P + +++IL+  L    + +    L + +   G  P+
Sbjct: 345 KAGNLS--EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N LI+  CK G    A  V  ++      PN +TF+ LI+G C  G++  A  L+ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++ +    P+VV +  LI+G  +  NT  A +L +EM  E G    P+V T + +IDGLC
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM-QEAG--LHPNVFTLSCLIDGLC 519

Query: 236 KDGFVDKAKELLLQMK------------DRNINPNVITYNSLICGFC--CVDDWKEAKCL 281
           KDG +  A +L L               DR++        SL  G    C+   +  K L
Sbjct: 520 KDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTK-L 578

Query: 282 FIEMMDNGVQPDVVTF------NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           F    +N  +  + T       N  +    +     KV     +++++  NP ++   SL
Sbjct: 579 FAT--NNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRK--NPSSIDSFSL 634

Query: 336 MDGF---CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           M       L   +   +++   +++ G    ++    LI+       V DA  ++ E+ S
Sbjct: 635 MFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPS 694

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           +    ++I++ +++S          AL+L  +MQ++DV PD  T    +      G +  
Sbjct: 695 K----NLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDM 750

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL-------------QHKG 499
              +   IR+   +  +   N LIN   K G + TA +    L              H G
Sbjct: 751 GEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMACSHAG 810

Query: 500 PI-----------------PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            +                 P +     M+  LC+ G + +A + +L M  +   P+ V +
Sbjct: 811 LVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVR---PNAVVW 867

Query: 543 CTLL 546
            TLL
Sbjct: 868 RTLL 871



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 108/500 (21%), Positives = 201/500 (40%), Gaps = 65/500 (13%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+   +A+     M +    P + +F+ L+    K  + +  + L+  +   GL PD
Sbjct: 415 KEGNM--EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI+   K G T  AF +   +  +   PN  T + LI+GLC +GRI +A +L  
Sbjct: 473 VVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL-- 530

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
               F       T  +  N L R+   + +L L     + F  I +P +      +  L 
Sbjct: 531 ----FLAKTGTDTTGSKTNELDRSLYQMCSLAL-----SLFRGISEPCICVIR--VTKLF 579

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL-FIEMMDNGVQPDV 294
                 KA  L   +K    N  +  Y         +     +K L F  ++       +
Sbjct: 580 ATNNQPKA-HLHTHLKPPKSNQTLKRY---------LQSSNTSKVLLFFRILLRKNPSSI 629

Query: 295 VTFNAMINYNCKDGKMDKVN--RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
            +F+ M        K   V   ++  L+I  G  P      SL+  +   G ++ A  +F
Sbjct: 630 DSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMF 689

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             + SK    ++ S+  +I+A   +Q+   A+ L+R+M  + ++P ++T    LS    +
Sbjct: 690 DEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADL 745

Query: 413 G--NLGDALKLIDKMQ-------LND--------------------VVPDSFTFATYIDG 443
           G  ++G+ +    + +       LN+                    V+P+  TF   +  
Sbjct: 746 GALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMA 805

Query: 444 LCKNGFVLEAVQVFQAIR-NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
               G V E  Q F++++ +     RI  + C+++ LC+ G L  A +   ++  +   P
Sbjct: 806 CSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVR---P 862

Query: 503 DVVTCSTMIHWLCKEGQMDK 522
           + V   T++     +G  DK
Sbjct: 863 NAVVWRTLLGACSLQGMWDK 882



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 12/205 (5%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           PS  + S+T +++    N++ +  + LF+++  + + PD+  + + ++    +G      
Sbjct: 693 PSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGE 752

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +   I       +    N LIN     G I  A R    L      PN VTF  ++   
Sbjct: 753 WIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVL------PNDVTFMGVLMAC 806

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
                     + F  M  ++    +P +  +  ++D LC+ G + +A E +L+M  R   
Sbjct: 807 SHAGLVEEGKQHFRSMKEDYS--LRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVR--- 861

Query: 257 PNVITYNSLICGFCCVDDWKEAKCL 281
           PN + + +L+ G C +    + K L
Sbjct: 862 PNAVVWRTLL-GACSLQGMWDKKML 885


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 157/552 (28%), Positives = 269/552 (48%), Gaps = 47/552 (8%)

Query: 70  DCMIKMK-----PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           +C +KM+     P P   S   LL  L+K  + D     FK + + G+   +F  N++I+
Sbjct: 206 ECFLKMRKFRVFPKP--RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMID 263

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK G    A  +  ++  + FTP+ VT+N LI+G    G + E   +F+++    CDP
Sbjct: 264 YLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDP 323

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V+T+N LIN  C+      A +   EM        KP+VVTY++ ID  CK+G + +A 
Sbjct: 324 DVITYNALINCFCKFERMPKAFEFLHEMK---ANGLKPNVVTYSTFIDAFCKEGMLQEAI 380

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +  + M+   + PN  TY SLI   C   +  EA  L  E++  G++ +VVT+ A+++  
Sbjct: 381 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C++G+M +   +   M+  GV P+  TY +L+ GF     +  A+++   M  K  + D+
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y  ++   C + ++E+A  L  E+    I  + + Y TL+   F+ G   +AL L+++
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    ++    T+   IDGLCK+G V EA+  F  +     +  +  Y  L++GLCK   
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNC 620

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIH-------------------------------- 512
            + A KLF  +  KG +PD +  + +I                                 
Sbjct: 621 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 680

Query: 513 --W-LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
             W L   GQ+ KA +LL +M  K  +P EV +  L++ +    K  + + L ++MA   
Sbjct: 681 LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740

Query: 570 LV--VSDLSLSS 579
           ++  +SD ++ S
Sbjct: 741 MITGLSDHAVPS 752



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 257/492 (52%), Gaps = 13/492 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG---ITSGA 135
           PG   F  L + L +    +     F ++    +FP     N L++ L K+G   ++   
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 136 FVVLGR--ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
           F  +G   I RS FT     +N +I+ LC EG +  A  LF ++      P++VT+N+LI
Sbjct: 243 FKDMGAAGIKRSVFT-----YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI 297

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           +G  +       + +FE+M +   A C PDV+TYN++I+  CK   + KA E L +MK  
Sbjct: 298 DGHGKLGLLDECICIFEQMKD---ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN 354

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            + PNV+TY++ I  FC     +EA   F++M    + P+  T+ ++I+ NCK G + + 
Sbjct: 355 GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEA 414

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
            +L+E ++Q G+  + VTY +L+DG C  GR+  A E+F +M++ G   +  +Y  L++ 
Sbjct: 415 LKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHG 474

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             K +++E A  + +EM  + I+P ++ Y T+L GL     L +A  LI +++ + +  +
Sbjct: 475 FIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTN 534

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           +  + T +D   K+G   EA+ + + + +        TY  LI+GLCK G ++ A   F 
Sbjct: 535 AVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFG 594

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           R+   G  P+V   + ++  LCK    + A  L  +M  K  +P ++ +  L+ G +++ 
Sbjct: 595 RMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHG 654

Query: 554 KKSKVVVLLHKM 565
              + + L  +M
Sbjct: 655 NLQEALNLRDRM 666



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 200/384 (52%), Gaps = 1/384 (0%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           +C P    ++++   L + G +++A E  L+M+   + P   + N+L+     V     +
Sbjct: 180 VCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLS 239

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           +  F +M   G++  V T+N MI+Y CK+G ++    L   M + G  PD VTYNSL+DG
Sbjct: 240 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
              +G +     +F  M    C  DV +YN LIN  CK +++  A     EM +  ++P+
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 359

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           V+TY+T +    + G L +A+K    M+   + P+ FT+ + ID  CK G + EA+++ +
Sbjct: 360 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 419

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            I     +L + TY  L++GLC+ GR+K A ++F  + + G  P+  T + ++H   K  
Sbjct: 420 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 479

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
           +M+ A D+L +M+ K   P  + + T+L G    ++  +  +L+ ++  E  + ++  + 
Sbjct: 480 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI-KESGINTNAVIY 538

Query: 579 SKVVDLLSKDKKYRECLNQFRHLL 602
           + ++D   K  +  E L     +L
Sbjct: 539 TTLMDAYFKSGQATEALTLLEEML 562



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 210/439 (47%), Gaps = 3/439 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E +  F+ M      P + ++  L+    K ++          + +NGL P++   +  
Sbjct: 307 DECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTF 366

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK G+   A      + R   TPN  T+  LI+  C  G + EA +L +++     
Sbjct: 367 IDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGI 426

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             NVVT+  L++GLC       A ++F  M+N   A   P+  TY +++ G  K   ++ 
Sbjct: 427 KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN---AGVAPNQETYTALVHGFIKAKEMEY 483

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK++L +MK++ I P+++ Y +++ G C     +EAK L  E+ ++G+  + V +  +++
Sbjct: 484 AKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMD 543

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G+  +   LLE M+  G+    VTY +L+DG C  G +  A   F  M   G + 
Sbjct: 544 AYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQP 603

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V  Y  L++  CK+   E A  L+ EML + + P  I Y  L+ G  + GNL +AL L 
Sbjct: 604 NVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLR 663

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M    +  D   +   I GL  +G V +A  +   +           Y CLI     +
Sbjct: 664 DRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYAL 723

Query: 483 GRLKTACKLFHRLQHKGPI 501
           G++  A +L + +  +G I
Sbjct: 724 GKVDEALELQNEMAKRGMI 742



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 220/417 (52%), Gaps = 4/417 (0%)

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P    F+ L + L        A + F +M  +F    KP   + N+++  L K G  D
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKM-RKFRVFPKPR--SCNALLHRLSKVGRGD 237

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            +++    M    I  +V TYN +I   C   D + A+ LF +M + G  PD+VT+N++I
Sbjct: 238 LSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI 297

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           + + K G +D+   + E M     +PD +TYN+L++ FC   R+ +A E    M + G +
Sbjct: 298 DGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLK 357

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +V +Y+  I+A CK+  +++A+  + +M    + P+  TY +L+    + GNL +ALKL
Sbjct: 358 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 417

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ++++    +  +  T+   +DGLC+ G + EA +VF+A+ N       ETY  L++G  K
Sbjct: 418 VEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIK 477

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              ++ A  +   ++ K   PD++   T++  LC E ++++A  L+ +++      + V 
Sbjct: 478 AKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVI 537

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           + TL+  + ++ + ++ + LL +M    L+ ++++  + ++D L K    +E ++ F
Sbjct: 538 YTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCA-LIDGLCKSGLVQEAMHHF 593



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 5/200 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG  T  EA+   + M+ +       ++  L+  L K+      +  F R++  GL P+
Sbjct: 547 KSGQAT--EALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPN 604

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           + V   L++ LCK      A  +   +L     P+ + +  LI+G    G + EA  L  
Sbjct: 605 VAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD 664

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++     + ++  +  LI GL  +     A  L +EM+   G    PD V Y  +I    
Sbjct: 665 RMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMI---GKGVLPDEVVYMCLIKKYY 721

Query: 236 KDGFVDKAKELLLQMKDRNI 255
             G VD+A EL  +M  R +
Sbjct: 722 ALGKVDEALELQNEMAKRGM 741


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 164/504 (32%), Positives = 248/504 (49%), Gaps = 7/504 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+   EA  +   +++   S    ++T L+    +NK  D   ++F  + + G   +
Sbjct: 216 KLGNVV--EAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRN 273

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 LI+  C+      A  +  ++      P   T+  +I  LC  GR  EA  +FK
Sbjct: 274 EVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFK 333

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++    C PNV T+  LI  LC   N   A K+   M+ E G I  P VVTYN++IDG C
Sbjct: 334 EMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGML-EKGLI--PSVVTYNALIDGYC 390

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G    A E+L  M+  N +PN  TYN LI GFC   +  +A  L  +M++  +QP+VV
Sbjct: 391 KKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVV 450

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I+  CK+G +    +LL LM + G+ PD  TY+  +D  C  G +  AR LF S+
Sbjct: 451 TYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESL 510

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             KG + +   Y+ LI+  CK  KV D   L  +MLS    P+ ITYN+L+ G  +  N 
Sbjct: 511 KEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNF 570

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A  L+D M   D+ P + T+   ID L K+    +A  +F  + +      +  Y   
Sbjct: 571 KEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAF 630

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+  C  GRLK A  L  ++  KG +PD +  +  I    + G +D A  +L  M    C
Sbjct: 631 IHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGC 690

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVV 559
            PS  T+  L++    +N K K V
Sbjct: 691 EPSYYTYSCLIKHL--SNAKPKEV 712



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 232/435 (53%), Gaps = 3/435 (0%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N+L+  L +  +      V   +L    TPN  T N ++NG C  G ++EA     K+  
Sbjct: 173 NMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQ 232

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
                +  T+ +LI G CR +N   A  +F  M N+    C  + V+Y ++I G C+   
Sbjct: 233 AGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG---CLRNEVSYTNLIHGFCEARR 289

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           VD+A +L  QM + N  P V TY  +I   C +    EA  +F EM +   QP+V T+  
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTV 349

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I   C+D   D   ++L  M+++G+ P  VTYN+L+DG+C  G  + A E+   M S  
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  +  +YN LI   C+ + +  A+ L  +ML  +++P+V+TYN L+ G  + G+LG A 
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           KL+  M  + +VPD +T++ +ID LCK G V EA  +F++++    +     Y+ LI+G 
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK+G++     L  ++   G +P+ +T +++I   CKE    +A  L+  M  ++  P+ 
Sbjct: 530 CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAA 589

Query: 540 VTFCTLLRGFVQNNK 554
            T+  L+   +++++
Sbjct: 590 DTYTILIDNLLKDDE 604



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 147/585 (25%), Positives = 244/585 (41%), Gaps = 102/585 (17%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  F  M +    P + ++T+L+  L ++  +D    +   +   GL P +   N LI
Sbjct: 327 EALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI 386

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G+++ A  +L  +  +  +PN  T+N LI G C    I +A  L  K+      
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNVVT+N LI+G C+  +   A KL   ++NE G +  PD  TY+  ID LCK G V++A
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLS-LMNESGLV--PDEWTYSVFIDTLCKRGLVEEA 503

Query: 244 KELLLQMKDRNIN-----------------------------------PNVITYNSLICG 268
           + L   +K++ I                                    PN ITYNSLI G
Sbjct: 504 RSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDG 563

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           +C   ++KEA+ L   M+   ++P   T+  +I+   KD + D+ + + + M+  G +PD
Sbjct: 564 YCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPD 623

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
              Y + +  +C  GR+  A  L   M +KG   D   Y + I+A  +   ++ A  + +
Sbjct: 624 VFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILK 683

Query: 389 EMLSERIRPSVITYNTLLSGL-----------------------------FQVGNLGDAL 419
            M      PS  TY+ L+  L                             ++  +    L
Sbjct: 684 RMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTL 743

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L  KM  +   P++ T+  +I GLCK G +  A ++F  ++        + YN L+   
Sbjct: 744 DLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCS 803

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCS------------------------------- 508
           C++G    A +    +     +P + +C                                
Sbjct: 804 CQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDE 863

Query: 509 ----TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
                +I  L K+G  DK +DL   ME + C     T+  L+ GF
Sbjct: 864 MVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 207/390 (53%), Gaps = 8/390 (2%)

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           V L++ ++MV        P++ T N++++G CK G V +A+  + ++    ++ +  TY 
Sbjct: 191 VYLEMLDDMVT-------PNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYT 243

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           SLI G+C   +   A  +F+ M + G   + V++  +I+  C+  ++D+  +L   M + 
Sbjct: 244 SLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHED 303

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
              P   TY  ++   C +GR + A  +F  M  K C+ +V++Y +LI + C+D   +DA
Sbjct: 304 NCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDA 363

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             +   ML + + PSV+TYN L+ G  + G    AL+++  M+ N+  P++ T+   I G
Sbjct: 364 KKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILG 423

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C+   + +A+ +   +   K +  + TYN LI+G CK G L +A KL   +   G +PD
Sbjct: 424 FCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPD 483

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
             T S  I  LCK G +++A  L   ++ K    +EV + TL+ G+ +  K S    LL 
Sbjct: 484 EWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLD 543

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           KM +   V + ++ +S ++D   K+K ++E
Sbjct: 544 KMLSAGCVPNSITYNS-LIDGYCKEKNFKE 572


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 213/379 (56%), Gaps = 3/379 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+  T+N LI GLC  GR   A  +  ++    C P+VVT+  L+   C+      A+KL
Sbjct: 30  PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            +EM ++    C PD+VTYN +++G+C++G VD A E L  +      PN ++YN ++ G
Sbjct: 90  LDEMRDKG---CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKG 146

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C  + W++A+ L  EM   G  P+VVTFN +I++ C+ G ++    +LE + + G  P+
Sbjct: 147 LCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPN 206

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           +++YN L+  FC   ++ +A      MVS+GC  D+ SYN L+ A C+  +V+ AV L  
Sbjct: 207 SLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 266

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           ++  +   P +I+YNT++ GL + G   +AL+L+++M    + PD  T++T   GLC+  
Sbjct: 267 QLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRED 326

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + +A++ F  +++         YN +I GLCK     +A  LF  +   G +P+  T +
Sbjct: 327 RIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYT 386

Query: 509 TMIHWLCKEGQMDKANDLL 527
            +I  L  EG + +A DLL
Sbjct: 387 ILIEGLAYEGLIKEARDLL 405



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 210/399 (52%), Gaps = 6/399 (1%)

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           + +N ++ G C  G++  A RL  ++ V   +P+  T+NTLI GLC    T  AL + +E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M+      C PDVVTY  +++  CK     +A +LL +M+D+   P+++TYN ++ G C 
Sbjct: 58  MLRRR---CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 114

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
                +A      +   G +P+ V++N ++   C   + +    L+  M Q+G  P+ VT
Sbjct: 115 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 174

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           +N L+   C  G +  A E+   +   GC  +  SYN L++A CK +K++ A+     M+
Sbjct: 175 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 234

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
           S    P +++YNTLL+ L + G +  A++L+ +++     P   ++ T IDGL K G   
Sbjct: 235 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 294

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           EA+++   + +   +  I TY+ +  GLC+  R++ A + F ++Q  G  P+ V  + +I
Sbjct: 295 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 354

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
             LCK  +   A DL   M    C+P+E T+  L+ G  
Sbjct: 355 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 393



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 193/381 (50%), Gaps = 5/381 (1%)

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
           +M   P   ++  L+  L    +    +++   +      PD+    +L+   CK     
Sbjct: 25  EMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK 84

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            A  +L  +     TP+ VT+N ++NG+C EGR+ +A    K L  + C+PN V++N ++
Sbjct: 85  QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 144

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
            GLC       A    EE++ E G   C P+VVT+N +I  LC+ G V+ A E+L Q+  
Sbjct: 145 KGLCTAERWEDA----EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 200

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
               PN ++YN L+  FC      +A      M+  G  PD+V++N ++   C+ G++D 
Sbjct: 201 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 260

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              LL  +  +G  P  ++YN+++DG    G+   A EL   MVSKG + D+ +Y+ +  
Sbjct: 261 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 320

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             C++ ++EDA+  + ++    IRP+ + YN ++ GL +      A+ L   M  N  +P
Sbjct: 321 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 380

Query: 433 DSFTFATYIDGLCKNGFVLEA 453
           +  T+   I+GL   G + EA
Sbjct: 381 NESTYTILIEGLAYEGLIKEA 401



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 192/379 (50%), Gaps = 6/379 (1%)

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           + +N ++ G C       A +L  EM  E      PD  TYN++I GLC  G    A  +
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPVE------PDAYTYNTLIRGLCGRGRTANALAV 54

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L +M  R   P+V+TY  L+   C    +K+A  L  EM D G  PD+VT+N ++N  C+
Sbjct: 55  LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 114

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G++D     L+ +   G  P+TV+YN ++ G C   R   A EL   M  KGC  +V +
Sbjct: 115 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 174

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           +N+LI+  C+   VE A+ +  ++      P+ ++YN LL    +   +  A+  +D M 
Sbjct: 175 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 234

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                PD  ++ T +  LC++G V  AV++   +++  C   + +YN +I+GL K G+ K
Sbjct: 235 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 294

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +L + +  KG  PD++T ST+   LC+E +++ A      ++     P+ V +  ++
Sbjct: 295 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 354

Query: 547 RGFVQNNKKSKVVVLLHKM 565
            G  +  +    + L   M
Sbjct: 355 LGLCKRRETHSAIDLFAYM 373



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 186/372 (50%), Gaps = 3/372 (0%)

Query: 54  RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
           R   G   +  A+   D M++ +  P + ++TILL    K   Y   + L   +   G  
Sbjct: 40  RGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCT 99

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD+   N+++N +C+ G    A   L  +      PNTV++N ++ GLC   R  +A  L
Sbjct: 100 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 159

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             ++    C PNVVTFN LI+ LCR      AL++ E+ + ++G  C P+ ++YN ++  
Sbjct: 160 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ-IPKYG--CTPNSLSYNPLLHA 216

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            CK   +DKA   L  M  R   P++++YN+L+   C   +   A  L  ++ D G  P 
Sbjct: 217 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 276

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           ++++N +I+   K GK  +   LL  M+ +G+ PD +TY+++  G C   RI  A   F 
Sbjct: 277 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 336

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            +   G R +   YN +I   CK ++   A+ L+  M+     P+  TY  L+ GL   G
Sbjct: 337 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 396

Query: 414 NLGDALKLIDKM 425
            + +A  L+D++
Sbjct: 397 LIKEARDLLDEL 408



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 171/330 (51%), Gaps = 3/330 (0%)

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           + YN+++ G+C       A+ L  EM    V+PD  T+N +I   C  G+      +L+ 
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M++R   PD VTY  L++  C      +A +L   M  KGC  D+ +YN+++N  C++ +
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           V+DA+   + + S    P+ ++YN +L GL       DA +L+ +M      P+  TF  
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I  LC+ G V  A++V + I    C     +YN L++  CK  ++  A      +  +G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             PD+V+ +T++  LC+ G++D A +LL  ++ K C P  +++ T++ G  +  K  + +
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
            LL++M ++ L    ++ S+    L  +D+
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDR 327



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 159/297 (53%), Gaps = 3/297 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ F   +      P   S+ I+L  L   ++++    L   +   G  P++   N+L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC+ G+   A  VL +I +   TPN++++N L++  C + ++ +A      +    C
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++V++NTL+  LCR+    VA++L  ++ ++    C P +++YN++IDGL K G   +
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG---CAPVLISYNTVIDGLTKAGKTKE 295

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ELL +M  + + P++ITY+++  G C  D  ++A   F ++ D G++P+ V +NA+I 
Sbjct: 296 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 355

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             CK  +      L   MI  G  P+  TY  L++G    G I  AR+L   + S+ 
Sbjct: 356 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 72/190 (37%), Gaps = 35/190 (18%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ F D M+     P + S+  LLT L ++ + D  V L  +L   G  P L   N +
Sbjct: 224 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 283

Query: 123 INCLCKMGITSGAFVVL-----------------------------------GRILRSCF 147
           I+ L K G T  A  +L                                   G++     
Sbjct: 284 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 343

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            PNTV +N +I GLC       A  LF  +    C PN  T+  LI GL        A  
Sbjct: 344 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 403

Query: 208 LFEEMVNEFG 217
           L +E+ +  G
Sbjct: 404 LLDELCSRAG 413


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 143/433 (33%), Positives = 234/433 (54%), Gaps = 3/433 (0%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V   I  S    N  T   LI+GLC + R+ +A    ++       P+VV+FN L++G C
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  +  VA   F  M+ ++G +  PDV +YN ++ GLC  G +++A E    M++  + P
Sbjct: 282 KMGSVDVAKSFFCMMI-KYGLL--PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEP 338

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +++TYN L  GF  +     A  +   M+ NG+ PD+VT+  +I  +C+ G +++  +L 
Sbjct: 339 DIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLK 398

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M+ +G+    VTY  L+   C  GRI  A  L   M   G + D+ +Y++LI+  CK 
Sbjct: 399 EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKR 458

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             VE+A+ LY EM S+RI P+    + ++SGLF+ G + +A    D +  +DV  +   +
Sbjct: 459 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 518

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              IDG  K G + EAV+ ++ I        I T+N LI G CK G+L  A KL   ++ 
Sbjct: 519 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 578

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G +P  VT +T+++  C+EG M    D+L +MEAK   P+++T+  +++G  +  +  +
Sbjct: 579 HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 638

Query: 558 VVVLLHKMAAEKL 570
            V LL  M A  L
Sbjct: 639 SVQLLKYMYARGL 651



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 233/430 (54%), Gaps = 6/430 (1%)

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSII 231
           ++ ++       N  T   LI+GLCR      A+    E    EFG    P VV++N+++
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFG----PSVVSFNALM 277

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
            G CK G VD AK     M    + P+V +YN L+ G C     +EA     +M ++GV+
Sbjct: 278 SGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVE 337

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PD+VT+N + N     G +    ++++ M+  G+NPD VTY  L+ G C +G I  + +L
Sbjct: 338 PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKL 397

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              M+S+G +  + +Y +L+++ CK  ++++AV L  EM    ++P ++TY+ L+ GL +
Sbjct: 398 KEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCK 457

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G + +A++L ++M    + P+SF  +  I GL + G + EA   F ++        I  
Sbjct: 458 RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIIL 517

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN +I+G  K+G +  A + + ++  KG  P +VT +++I+  CK+G++ +A  LL  ++
Sbjct: 518 YNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK 577

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
               VP+ VT+ TL+ G+ +      +  +LH+M A+ +  + ++ +  VV  L K+ + 
Sbjct: 578 VHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV-VVKGLCKEGRL 636

Query: 592 RECLNQFRHL 601
            E +   +++
Sbjct: 637 HESVQLLKYM 646



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 236/456 (51%), Gaps = 3/456 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF  MIK    P + S+ ILL  L      +  +     + ++G+ PD+   N+L N   
Sbjct: 292 FFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFR 351

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
            +G+ SGA+ V+ R+L +   P+ VT+  LI G C  G I E+ +L +K+       ++V
Sbjct: 352 ILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+  L++ LC++     A+ L  EM    G   KPD++TY+ +I GLCK G V++A EL 
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEM-EVIG--LKPDLLTYSVLIHGLCKRGAVEEAIELY 468

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M  + I PN    +++I G        EA+  F  +  + V  +++ +N MI+   K 
Sbjct: 469 EEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKL 528

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G + +  R  + +I++G++P  VT+NSL+ GFC  G+++ A +L  ++   G      +Y
Sbjct: 529 GNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTY 588

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             L+N  C++  +     +  EM ++ I+P+ ITY  ++ GL + G L ++++L+  M  
Sbjct: 589 TTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYA 648

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + PD  T+ T I   CK   + +A Q+   +     +    TYN LINGLC  G LK 
Sbjct: 649 RGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKD 708

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           A +L   LQ +      V  +T+I   C +G +  A
Sbjct: 709 ADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNA 744



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 244/495 (49%), Gaps = 3/495 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + SF  L++   K    D   S F  +   GL PD++  N+L++ LC  G    A   
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +      P+ VT+N L NG    G I  A ++ +++ +   +P++VT+  LI G C+
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             N   + KL E+M+++     K  +VTY  ++  LCK G +D+A  LL +M+   + P+
Sbjct: 388 MGNIEESFKLKEKMLSQG---LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPD 444

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           ++TY+ LI G C     +EA  L+ EM    + P+    +A+I+   + G + +     +
Sbjct: 445 LLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFD 504

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            + +  V  + + YN ++DG+  +G I  A   +  ++ KG    + ++N LI   CK  
Sbjct: 505 SVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKG 564

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K+ +AV L   +    + P+ +TY TL++G  + G++     ++ +M+   + P   T+ 
Sbjct: 565 KLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYT 624

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             + GLCK G + E+VQ+ + +          TYN +I   CK   L+ A +L +++   
Sbjct: 625 VVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQH 684

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
              P  VT + +I+ LC  G +  A+ LL+ ++ ++   ++V + T+++           
Sbjct: 685 SLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNA 744

Query: 559 VVLLHKMAAEKLVVS 573
           +V  H+M      VS
Sbjct: 745 LVFFHQMVERGFEVS 759



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 199/408 (48%), Gaps = 5/408 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG I  +EAV     M  +   P + ++++L+  L K    +  + L++ + S  ++P+
Sbjct: 422 KSGRI--DEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPN 479

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            FV + +I+ L + G  S A +    + +S      + +N +I+G    G I EA R +K
Sbjct: 480 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 539

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P +VTFN+LI G C+      A+KL +  +   G +  P  VTY ++++G C
Sbjct: 540 QIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT-IKVHGLV--PTSVTYTTLMNGYC 596

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           ++G +    ++L +M+ + I P  ITY  ++ G C      E+  L   M   G+ PD +
Sbjct: 597 EEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 656

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I   CK   + K  +L   M+Q  + P  VTYN L++G C+ G +  A  L V++
Sbjct: 657 TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTL 716

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +  R    +Y  +I A+C    V++A+  + +M+      S+  Y+ +++ L +   +
Sbjct: 717 QDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLI 776

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            DA      M  + + PD       ++   ++G      ++F  +  C
Sbjct: 777 TDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKC 824



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 143/304 (47%), Gaps = 5/304 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GNI   EAV  +  +I+   SP + +F  L+    K  +    V L   +  +GL P 
Sbjct: 527 KLGNI--GEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 584

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 L+N  C+ G     F +L  +      P  +T+  ++ GLC EGR+ E+ +L K
Sbjct: 585 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 644

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      P+ +T+NT+I   C+  +   A +L  +M+       +P  VTYN +I+GLC
Sbjct: 645 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHS---LQPSPVTYNVLINGLC 701

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
             G +  A  LL+ ++D++I    + Y ++I   C   D + A   F +M++ G +  + 
Sbjct: 702 VYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIR 761

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            ++A+IN  CK   +        +M+  G+ PD      +++ F   G  +   E+F  M
Sbjct: 762 DYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMM 821

Query: 356 VSKG 359
           +  G
Sbjct: 822 IKCG 825



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 184/407 (45%), Gaps = 29/407 (7%)

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  N+  AL LF+ + NE+G   +   V++  +   + + G   + + +L QM +   + 
Sbjct: 91  RVDNSDSALFLFDLLRNEYG--FRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSG 148

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +  +   L+C      DW            N V  D++         C   + + V+  L
Sbjct: 149 SAPSLCELLCN--SFRDWDL----------NNVVWDMLA--------CAYSRAEMVHDAL 188

Query: 318 ELMIQRGV---NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            ++ +  V        TYNSL+     +       +++  + + G   + Y+  ILI+  
Sbjct: 189 FVLAKMKVLNLQVSIATYNSLLYN---LRHTDIMWDVYNEIKASGVPQNEYTNPILIDGL 245

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C+  +++DAV   RE   E   PSV+++N L+SG  ++G++  A      M    ++PD 
Sbjct: 246 CRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDV 305

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           +++   + GLC  G + EA++    + N   E  I TYN L NG   +G +  A K+  R
Sbjct: 306 YSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQR 365

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +   G  PD+VT + +I   C+ G ++++  L   M ++    S VT+  LL    ++ +
Sbjct: 366 MLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGR 425

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             + V+LLH+M    L   DL   S ++  L K     E +  +  +
Sbjct: 426 IDEAVILLHEMEVIGL-KPDLLTYSVLIHGLCKRGAVEEAIELYEEM 471


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 253/502 (50%), Gaps = 18/502 (3%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A  FFD M+    +P + ++ IL+  L         +S+ + +   G  P+    N L+ 
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVA 200

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C+ G    A  ++  +      PN VTFN ++NG+C  GR+ +A ++F ++      P
Sbjct: 201 AFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAP 260

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + V++NTL+ G C+   +  AL +F EM  +      PDVVT+ S+I  +CK G +++A 
Sbjct: 261 DGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG---IMPDVVTFTSLIHVMCKAGNLERAV 317

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            L+ +M++R +  N IT+ +LI GFC      +A     EM    +QP VV +NA+IN  
Sbjct: 318 GLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGY 377

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  G+MD+   L+  M  +GV PD VTY++++  +C  G    A +L   M+  G   D 
Sbjct: 378 CMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDA 437

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y+ LI   C+++++ DA  L++ M+S  ++P  +TY +L+ G  + GN+  AL L D+
Sbjct: 438 ITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDE 497

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV---------------FQAIRNCKCELRI 469
           M    V+PD  T++  I+GL K+    EA ++               + A+  C     +
Sbjct: 498 MVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAEL 557

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
           ++   L+ G C  G +  A K++  +  +    D    S +IH  C+EG + KA      
Sbjct: 558 KSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQ 617

Query: 530 MEAKNCVPSEVTFCTLLRGFVQ 551
           M      P+  +  +L+RG  +
Sbjct: 618 MLQCGFAPNSTSTISLIRGLFE 639



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 192/358 (53%), Gaps = 1/358 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P V+ YN+++  L  D  +  A+     M    + PNV TYN L+   C     KEA  +
Sbjct: 121 PSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             +M   G  P+ VT+N ++   C+ G++D+  RL+++M + G+ P+ VT+NS+++G C 
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            GR+  AR++F  MV +G   D  SYN L+   CK     +A+ ++ EM  + I P V+T
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           + +L+  + + GNL  A+ L+ +M+   +  +  TF   IDG CK GF+ +A+   + +R
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
            C+ +  +  YN LING C +GR+  A +L   ++ KG  PDVVT ST++   CK G   
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            A  L   M     +P  +T+ +L+R   +  +     VL   M +  L   +++ +S
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTS 477



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 216/427 (50%), Gaps = 39/427 (9%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V+ +N ++  L    +   A + F+ M+++  A   P+V TYN ++  LC  G   +A
Sbjct: 121 PSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVA---PNVYTYNILVRALCGRGHRKEA 176

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +L  M+    +PN +TYN+L+  FC   +   A+ L   M + G++P++VTFN+++N 
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+M+   ++ + M++ G+ PD V+YN+L+ G+C VG    A  +F  M  KG   D
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSE------------------------------ 393
           V ++  LI+  CK   +E AV L REM                                 
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 394 -----RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
                RI+PSV+ YN L++G   VG + +A +L+ +M+   V PD  T++T +   CKNG
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
               A Q+ Q +          TY+ LI  LC+  RL  A  LF  +   G  PD VT +
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           ++I   CKEG +++A  L  +M     +P  VT+  L+ G  ++ +  +   LL K+  E
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHE 536

Query: 569 KLVVSDL 575
           + V +++
Sbjct: 537 EPVPANI 543



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 224/497 (45%), Gaps = 55/497 (11%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           ++G +  + A    D M +    P + +F  ++  + K  + +    +F  +   GL PD
Sbjct: 204 RAGEV--DRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPD 261

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N L+   CK+G +  A  V   + R    P+ VTF  LI+ +C  G +  A  L +
Sbjct: 262 GVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVR 321

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++       N +TF  LI+G C+      AL    EM        +P VV YN++I+G C
Sbjct: 322 EMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQ---CRIQPSVVCYNALINGYC 378

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
             G +D+A+EL+ +M+ + + P+V+TY++++  +C   D   A  L  +M++NGV PD +
Sbjct: 379 MVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAI 438

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T++++I   C++ ++   + L + MI  G+ PD VTY SL+DG C  G + RA  L   M
Sbjct: 439 TYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEM 498

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL--------- 406
           V  G   DV +Y++LIN   K  + ++A  L  ++  E   P+ I Y+ L+         
Sbjct: 499 VKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELK 558

Query: 407 -----------------------------------------SGLFQVGNLGDALKLIDKM 425
                                                     G  + GN+  AL    +M
Sbjct: 559 SVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQM 618

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
                 P+S +  + I GL + G V+EA QV Q + NC      E    LI+   K G +
Sbjct: 619 LQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNV 678

Query: 486 KTACKLFHRLQHKGPIP 502
                + H +   G +P
Sbjct: 679 DAVLDVLHGMARDGLLP 695



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 163/342 (47%), Gaps = 18/342 (5%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M + +  P +  +  L+       + D    L + + + G+ PD+   + +++  CK G 
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T  AF +  ++L +   P+ +T++ LI  LC E R+ +A  LFK +      P+ VT+ +
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTS 477

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+G C+  N   AL L +EMV    A   PDVVTY+ +I+GL K     +A+ LL ++ 
Sbjct: 478 LIDGHCKEGNVERALSLHDEMVK---AGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLY 534

Query: 252 DRNINPNVITYNSLI--C-------------GFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
                P  I Y++L+  C             GFC      EA  ++  ++D     D   
Sbjct: 535 HEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSV 594

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           ++ +I+ +C++G + K     + M+Q G  P++ +  SL+ G    G +  A ++   ++
Sbjct: 595 YSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLL 654

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +     D  +   LI+ N K+  V+  + +   M  + + PS
Sbjct: 655 NCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 139/449 (30%), Positives = 237/449 (52%), Gaps = 21/449 (4%)

Query: 92  AKNKQYDTVVSLFKRLNSNGLF-----------PDLFVLNLLINCLCKMGITSGA--FVV 138
           A+     T  +L K+L+++G             PD+   N ++   C  G    A  +  
Sbjct: 93  ARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMMAGYCGAGQVDAARRWCA 152

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              + R  +T +T     LI GLC  GR   A  +  ++    C P+VVT+  L+   C+
Sbjct: 153 ERAVERDAYTCDT-----LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 207

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+KL +EM ++    C PD+VTYN +++G+C++G VD A E L  +      PN
Sbjct: 208 RSGYKQAMKLLDEMRDKG---CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 264

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            ++YN ++ G C  + W++A+ L  EM   G  P+VVTFN +I++ C+ G ++    +LE
Sbjct: 265 TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 324

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            + + G +P++++YN L+  FC   ++ +A      MVS+GC  D+ SYN L+ A C+  
Sbjct: 325 QIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 384

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +V+ AV L  ++  +   P +I+YNT++ GL + G   +AL+L+++M    + PD  T++
Sbjct: 385 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 444

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T   GLC+   + +A++ F  +++         YN +I GLCK     +A  LF  +   
Sbjct: 445 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 504

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           G +P+  T + +I  L  EG + +A DLL
Sbjct: 505 GCMPNESTYTILIEGLAYEGLIKEARDLL 533



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 225/445 (50%), Gaps = 11/445 (2%)

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
           RL  +   PD      LI  L   G T+ A     R+L +C  P+ + +N ++ G C  G
Sbjct: 88  RLVGSARRPDAGTCAALIKKLSASGRTAEAR----RVLAAC-GPDVMAYNAMMAGYCGAG 142

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           ++  A R   +  V   + +  T +TLI GLC    T  AL + +EM+      C PDVV
Sbjct: 143 QVDAARRWCAERAV---ERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRR---CVPDVV 196

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TY  +++  CK     +A +LL +M+D+   P+++TYN ++ G C      +A      +
Sbjct: 197 TYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL 256

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
              G +P+ V++N ++   C   + +    L+  M Q+G  P+ VT+N L+   C  G +
Sbjct: 257 PSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 316

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A E+   +   GC  +  SYN L++A CK +K++ A+     M+S    P +++YNTL
Sbjct: 317 EPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTL 376

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           L+ L + G +  A++L+ +++     P   ++ T IDGL K G   EA+++   + +   
Sbjct: 377 LTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGL 436

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +  I TY+ +  GLC+  R++ A + F ++Q  G  P+ V  + +I  LCK  +   A D
Sbjct: 437 QPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAID 496

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFV 550
           L   M    C+P+E T+  L+ G  
Sbjct: 497 LFAYMIGNGCMPNESTYTILIEGLA 521



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 186/372 (50%), Gaps = 3/372 (0%)

Query: 54  RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
           R   G   +  A+   D M++ +  P + ++TILL    K   Y   + L   +   G  
Sbjct: 168 RGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCT 227

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD+   N+++N +C+ G    A   L  +      PNTV++N ++ GLC   R  +A  L
Sbjct: 228 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 287

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             ++    C PNVVTFN LI+ LCR      AL++ E+ + ++G  C P+ ++YN ++  
Sbjct: 288 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ-IPKYG--CSPNSLSYNPLLHA 344

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            CK   +DKA   L  M  R   P++++YN+L+   C   +   A  L  ++ D G  P 
Sbjct: 345 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 404

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           ++++N +I+   K GK  +   LL  M+ +G+ PD +TY+++  G C   RI  A   F 
Sbjct: 405 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 464

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            +   G R +   YN +I   CK ++   A+ L+  M+     P+  TY  L+ GL   G
Sbjct: 465 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 524

Query: 414 NLGDALKLIDKM 425
            + +A  L+D++
Sbjct: 525 LIKEARDLLDEL 536



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 201/408 (49%), Gaps = 15/408 (3%)

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           +  L   G + EA RL       A  P+  T   LI  L  +  T  A ++         
Sbjct: 74  LRSLVRRGELDEALRLVGS----ARRPDAGTCAALIKKLSASGRTAEARRVL-------- 121

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
           A C PDV+ YN+++ G C  G VD A+       +R +  +  T ++LI G C       
Sbjct: 122 AACGPDVMAYNAMMAGYCGAGQVDAARRWC---AERAVERDAYTCDTLIRGLCGRGRTAN 178

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +  EM+     PDVVT+  ++   CK     +  +LL+ M  +G  PD VTYN +++
Sbjct: 179 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 238

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C  GR+  A E   ++ S GC  +  SYNI++   C  ++ EDA  L  EM  +   P
Sbjct: 239 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 298

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +V+T+N L+S L + G +  AL++++++      P+S ++   +   CK   + +A+   
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             + +  C   I +YN L+  LC+ G +  A +L H+L+ KG  P +++ +T+I  L K 
Sbjct: 359 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 418

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           G+  +A +LL +M +K   P  +T+ T+  G  + ++    +    K+
Sbjct: 419 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 466



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 192/388 (49%), Gaps = 8/388 (2%)

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
           +LV     +E +   G+  +PD  T  ++I  L   G   +A+ +L         P+V+ 
Sbjct: 76  SLVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAA-----CGPDVMA 130

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           YN+++ G+C       A+    E     V+ D  T + +I   C  G+      +L+ M+
Sbjct: 131 YNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEML 187

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           +R   PD VTY  L++  C      +A +L   M  KGC  D+ +YN+++N  C++ +V+
Sbjct: 188 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 247

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           DA+   + + S    P+ ++YN +L GL       DA +L+ +M      P+  TF   I
Sbjct: 248 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 307

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
             LC+ G V  A++V + I    C     +YN L++  CK  ++  A      +  +G  
Sbjct: 308 SFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 367

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           PD+V+ +T++  LC+ G++D A +LL  ++ K C P  +++ T++ G  +  K  + + L
Sbjct: 368 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 427

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           L++M ++ L    ++ S+    L  +D+
Sbjct: 428 LNEMVSKGLQPDIITYSTIAAGLCREDR 455



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 173/329 (52%), Gaps = 3/329 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M     +P + ++ +++  + +  + D  +   K L S G  P+    N+++
Sbjct: 213 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 272

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC       A  ++G + +    PN VTFN LI+ LC +G +  A  + +++  + C 
Sbjct: 273 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS 332

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN +++N L++  C+ +    A+   + MV+     C PD+V+YN+++  LC+ G VD A
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG---CYPDIVSYNTLLTALCRSGEVDVA 389

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ELL Q+KD+   P +I+YN++I G       KEA  L  EM+  G+QPD++T++ +   
Sbjct: 390 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 449

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C++ +++   R    +   G+ P+TV YN+++ G C       A +LF  M+  GC  +
Sbjct: 450 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 509

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLS 392
             +Y ILI     +  +++A  L  E+ S
Sbjct: 510 ESTYTILIEGLAYEGLIKEARDLLDELCS 538



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 160/297 (53%), Gaps = 3/297 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ F   +      P   S+ I+L  L   ++++    L   +   G  P++   N+L
Sbjct: 247 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 306

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC+ G+   A  VL +I +   +PN++++N L++  C + ++ +A      +    C
Sbjct: 307 ISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 366

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++V++NTL+  LCR+    VA++L  ++ ++    C P +++YN++IDGL K G   +
Sbjct: 367 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG---CAPVLISYNTVIDGLTKAGKTKE 423

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ELL +M  + + P++ITY+++  G C  D  ++A   F ++ D G++P+ V +NA+I 
Sbjct: 424 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 483

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             CK  +      L   MI  G  P+  TY  L++G    G I  AR+L   + S+G
Sbjct: 484 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 152/538 (28%), Positives = 262/538 (48%), Gaps = 5/538 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F+ M + +  P   ++  ++       ++D   SL +R  + G  P +   N +
Sbjct: 320 DEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCI 379

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + CL K G    A      + +    PN  T+N LI+ LC  G +  A ++   +     
Sbjct: 380 LTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGL 438

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV+T N +I+ LC+ +    A  +FE M ++   IC PD VT+ S+IDGL K G VD 
Sbjct: 439 FPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK---ICSPDEVTFCSLIDGLGKQGRVDD 495

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  QM D +  PN + Y SLI  F      ++   +F EM+  G  PD+   NA ++
Sbjct: 496 AYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMD 555

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G+  K   L E +  RG  PD ++Y+ L+ G    G      ELF +M  +GC  
Sbjct: 556 CVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVL 615

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D ++YN  I+  CK  KV  A  L  EM ++  +P+V+TY +++ GL ++  L +A  L 
Sbjct: 616 DTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLF 675

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++ + N +  +   +++ IDG  K G + EA  + + +        + T+NCL++ L K 
Sbjct: 676 EEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 735

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             +  A   F  +++    P+ +T S +I+ LC+  + +KA     +M+ +   P+ +T+
Sbjct: 736 EEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITY 795

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRH 600
            T++ G  +    ++   L  +  A   V    S ++ +++ LS  ++  E    F  
Sbjct: 796 TTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNA-IIEGLSYSRRAMEAYKIFEE 852



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 234/473 (49%), Gaps = 4/473 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+  F+ M K   +P ++++ +L+ ML K  + +    +   +   GLFP++  +N++
Sbjct: 390 GEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIM 448

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK      A  +   +     +P+ VTF  LI+GL  +GR+ +A RL++++     
Sbjct: 449 IDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDK 508

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN V + +LI    +        K+F+EM++     C PD+   N+ +D + K G   K
Sbjct: 509 IPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRG---CSPDLRLLNAYMDCVFKAGETGK 565

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            + L  ++K R   P+V++Y+ LI G       +E   LF  M + G   D   +N  I+
Sbjct: 566 GRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFID 625

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK GK++K  +LLE M  +G  P  VTY S++DG   + R+  A  LF    S G   
Sbjct: 626 GFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLEL 685

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V  Y+ LI+   K  ++++A  +  E++ + + P+V T+N LL  L +   + +AL   
Sbjct: 686 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCF 745

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M+     P+  T++  I+GLC+     +A   +Q ++    +    TY  +I GL K 
Sbjct: 746 QNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKA 805

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           G +  A  LF R +  G +PD  + + +I  L    +  +A  +  +   K C
Sbjct: 806 GNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGC 858



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/577 (25%), Positives = 273/577 (47%), Gaps = 37/577 (6%)

Query: 60  ITSNEAVYFFD---CMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           I SN+    FD   CM K K  P  +++T L+  L+  ++ D +++LF ++   G    +
Sbjct: 174 IKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSV 233

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            +   +I    + G    A  +L  +  +C   + V +N  I+     G++  A + F +
Sbjct: 234 HLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHE 293

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE---------------MVNEFGAI-- 219
           +      P+ VT+ ++I  LC+      A+++FE+               M+  +G+   
Sbjct: 294 IKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGK 353

Query: 220 ---------------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
                          C P V+ YN I+  L K G + +A     +MK ++  PN+ TYN 
Sbjct: 354 FDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNV 412

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI   C   + + A  +   M + G+ P+V+T N MI+  CK  K+D+   + E M  + 
Sbjct: 413 LIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKI 472

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
            +PD VT+ SL+DG    GR+  A  L+  M+      +   Y  LI +  K  + ED  
Sbjct: 473 CSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGH 532

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            +++EM+     P +   N  +  +F+ G  G    L ++++    +PD  +++  I GL
Sbjct: 533 KIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGL 592

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K GF  E  ++F A++   C L    YN  I+G CK G++  A +L   ++ KG  P V
Sbjct: 593 VKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTV 652

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           VT  ++I  L K  ++D+A  L  + ++     + V + +L+ GF +  +  +  +++ +
Sbjct: 653 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEE 712

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +  +K +  ++   + ++D L K ++  E L  F+++
Sbjct: 713 L-MQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNM 748



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 227/461 (49%), Gaps = 40/461 (8%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G + +  A    D M +    P + +  I++  L K K+ D   S+F+ +N     PD
Sbjct: 419 KAGEVEA--AFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPD 476

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 LI+ L K G    A+ +  ++L S   PN V +  LI      GR  +  ++FK
Sbjct: 477 EVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFK 536

Query: 176 KLNVFACDPN-----------------------------------VVTFNTLINGLCRTR 200
           ++    C P+                                   V++++ LI+GL +  
Sbjct: 537 EMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAG 596

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
                 +LF  M  E G  C  D   YN+ IDG CK G V+KA +LL +MK +   P V+
Sbjct: 597 FARETYELFYAM-KEQG--CVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVV 653

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY S+I G   +D   EA  LF E   NG++ +VV ++++I+   K G++D+   ++E +
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 713

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           +Q+G+ P+  T+N L+D       I+ A   F +M +     +  +Y+ILIN  C+ +K 
Sbjct: 714 MQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKF 773

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
             A   ++EM  + ++P+ ITY T+++GL + GN+ +A  L ++ + N  VPDS ++   
Sbjct: 774 NKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAI 833

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           I+GL  +   +EA ++F+  R   C +  +T   L++ L K
Sbjct: 834 IEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQK 874



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 195/420 (46%), Gaps = 5/420 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    ++   K G +  ++A   ++ M+     P    +T L+    K  + +    
Sbjct: 476 DEVTFCSLIDGLGKQGRV--DDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHK 533

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +FK +   G  PDL +LN  ++C+ K G T     +   I    F P+ ++++ LI+GL 
Sbjct: 534 IFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLV 593

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G   E   LF  +    C  +   +NT I+G C++     A +L EEM  +     +P
Sbjct: 594 KAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGR---QP 650

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            VVTY S+IDGL K   +D+A  L  + K   +  NV+ Y+SLI GF  V    EA  + 
Sbjct: 651 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIM 710

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            E+M  G+ P+V T+N +++   K  ++++     + M      P+ +TY+ L++G C V
Sbjct: 711 EELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRV 770

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            + ++A   +  M  +G + +  +Y  +I    K   + +A  L+    +    P   +Y
Sbjct: 771 RKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASY 830

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N ++ GL       +A K+ ++ ++      + T    +D L K+  + +A  V   +R 
Sbjct: 831 NAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLRE 890



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 190/400 (47%), Gaps = 4/400 (1%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +LG +  + F P+T T   LI       ++ E   L + +  F   P    + TLI  L 
Sbjct: 150 ILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALS 209

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
             + + + L LF +M  E G   +  V  + ++I    ++G +D A  LL +MK   ++ 
Sbjct: 210 SVQESDIMLTLFHQM-QELGY--EVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHA 266

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +++ YN  I  F        A   F E+  +G+ PD VT+ +MI   CK  ++D+   + 
Sbjct: 267 DIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIF 326

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M Q    P    YN+++ G+   G+   A  L     ++GC   V +YN ++    K 
Sbjct: 327 EQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKK 386

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            ++ +A+  + EM  +   P++ TYN L+  L + G +  A K+ D M+   + P+  T 
Sbjct: 387 GRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTV 445

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              ID LCK   + EA  +F+ + +  C     T+  LI+GL K GR+  A +L+ ++  
Sbjct: 446 NIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLD 505

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
              IP+ V  +++I    K G+ +  + +  +M  + C P
Sbjct: 506 SDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSP 545



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 169/363 (46%), Gaps = 2/363 (0%)

Query: 204 VALKLFEEMVNEFG-AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           V    FE+++ E   A   P   T   +I    K   + +  +L+  M+     P    Y
Sbjct: 142 VKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAY 201

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            +LI     V +      LF +M + G +  V  F  +I    ++G++D    LL+ M  
Sbjct: 202 TTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKS 261

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
             ++ D V YN  +D F   G++  A + F  + S G   D  +Y  +I   CK  ++++
Sbjct: 262 NCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDE 321

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           AV ++ +M   R  P    YNT++ G    G   +A  L+++ +    +P    +   + 
Sbjct: 322 AVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILT 381

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
            L K G + EA++ F+ ++       + TYN LI+ LCK G ++ A K+   ++  G  P
Sbjct: 382 CLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFP 440

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           +V+T + MI  LCK  ++D+A  +   M  K C P EVTFC+L+ G  +  +      L 
Sbjct: 441 NVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLY 500

Query: 563 HKM 565
            +M
Sbjct: 501 EQM 503



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 1/232 (0%)

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI +  K  K+ +   L + M   + RP+   Y TL+  L  V      L L  +MQ   
Sbjct: 169 LILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELG 228

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
                  F T I    + G +  A+ +   +++      I  YN  I+   K G++  A 
Sbjct: 229 YEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAW 288

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           K FH ++  G +PD VT ++MI  LCK  ++D+A ++   ME    VP    + T++ G+
Sbjct: 289 KFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGY 348

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
               K  +   LL +  A   + S ++ +  ++  L K  +  E L  F  +
Sbjct: 349 GSAGKFDEAYSLLERQKARGCIPSVIAYNC-ILTCLGKKGRLGEALRTFEEM 399



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 3/183 (1%)

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +++ +M +    P + T    I    K+  + E   + Q +R  K       Y  LI  L
Sbjct: 149 QILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGAL 208

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
             +        LFH++Q  G    V   +T+I    +EG++D A  LL +M++ NC+ ++
Sbjct: 209 SSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKS-NCLHAD 267

Query: 540 VTFCTL-LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           +    + +  F +  K        H++ +  L+  D++ +S ++ +L K  +  E +  F
Sbjct: 268 IVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTS-MIGVLCKGNRLDEAVEIF 326

Query: 599 RHL 601
             +
Sbjct: 327 EQM 329


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 164/568 (28%), Positives = 276/568 (48%), Gaps = 51/568 (8%)

Query: 30  PNPKTDLSSHHFKDGTSIAKFLNDRHKS--------------------GNITSNEAVYFF 69
           P+P  DLSSHHF    S  K+   RH S                     ++  N A+ FF
Sbjct: 49  PDPPDDLSSHHFLSILSHPKW--QRHPSFQKLIPNLSPSHVSSLFNNHPDLNPNIALQFF 106

Query: 70  DCMIKMKPSPGMT--SFTILLTMLAKNKQYDT--------------------VVSLFKRL 107
           + +  +KP    T  S + LL +L  N  +                      ++   +++
Sbjct: 107 NSLPLIKPGFKHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACVSVDDIRFLLDFLRQM 166

Query: 108 N--SNGLFPDLFV--LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
           N   N +   L V   N L+  L +  +      V   +L     PN  T N ++N    
Sbjct: 167 NRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSK 226

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
            G I+EA     K+      P+  T+ +LI G CR  +   A K+F  M N+    C+ +
Sbjct: 227 MGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG---CRRN 283

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
            V+Y +II GLC+ G +D+   L  +M++ +  P V TY  +I      D   E   LF 
Sbjct: 284 EVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFN 343

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM +   +P+V T+  M++  CK+ K+D+  R+L  M+++G+ P  VTYN+L+ G+C  G
Sbjct: 344 EMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEG 403

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           RI  A E+   M S  CR +  +YN LI    K + V  A+ L  +ML  ++ PS++TYN
Sbjct: 404 RIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYN 463

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +L+    + G+   A KL+D ++ N +VPD +T++ +ID LCK+  + EA  +F +++  
Sbjct: 464 SLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEK 523

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +     Y  LI+G CK G++  A  L  R+  +  +P+  T +++I+ +CKEG++ + 
Sbjct: 524 GIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEG 583

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
             ++ +M      P+  T+  L+   ++
Sbjct: 584 LSMVENMSKMGVKPTVATYTILIEEMLR 611



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 250/501 (49%), Gaps = 5/501 (0%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           ++   +N   K GNI   EA  +   + +   SP   ++T L+    +N   ++   +F 
Sbjct: 216 TLNTMVNAYSKMGNIV--EANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFN 273

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            + + G   +      +I+ LC+ G       +  ++      P   T+  +I+ L    
Sbjct: 274 MMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGND 333

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           R +E   LF ++   +C+PNV T+  +++ +C+ R    + ++  EM+ E G +  P VV
Sbjct: 334 RNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMM-EKGLV--PSVV 390

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TYN++I G C++G ++ A E+L  M+  N  PN  TYN LICGF       +A  L  +M
Sbjct: 391 TYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKM 450

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           +++ + P +VT+N++I+  CK G  D   +LL+L+ + G+ PD  TY+  +D  C   R+
Sbjct: 451 LESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRM 510

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A +LF S+  KG + +   Y  LI+ +CK  K+++A+ L   M SE   P+  TYN+L
Sbjct: 511 EEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSL 570

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + G+ + G + + L +++ M    V P   T+   I+ + + G    A +VF  + +   
Sbjct: 571 IYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGH 630

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +  + TY   I+  C  G +K A  +  R+   G +PD +T + +I    + G    A +
Sbjct: 631 KPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFN 690

Query: 526 LLLDMEAKNCVPSEVTFCTLL 546
           +L  M    C PS   +  L+
Sbjct: 691 VLKRMLDAGCDPSHPIWNNLI 711



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 246/502 (49%), Gaps = 38/502 (7%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+  LL MLA+    D +  ++  + ++ + P+++ LN ++N   KMG    A + + +I
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 143 LRSCFTP-----------------------------------NTVTFNFLINGLCAEGRI 167
            ++  +P                                   N V++  +I+GLC  GRI
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            E   LFKK+    C P V T+  +I+ L      L  + LF EM       C+P+V TY
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRER---SCEPNVHTY 357

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
             ++D +CK+  +D+++ +L +M ++ + P+V+TYN+LI G+C     + A  +   M  
Sbjct: 358 TVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES 417

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           N  +P+  T+N +I    K   + K   LL  M++  + P  VTYNSL+   C  G    
Sbjct: 418 NNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDS 477

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A +L   +   G   D ++Y++ I+  CK +++E+A  L+  +  + I+ + + Y  L+ 
Sbjct: 478 AYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALID 537

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G  + G + +A+ L+++M   D +P+S T+ + I G+CK G V E + + + +     + 
Sbjct: 538 GHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKP 597

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + TY  LI  + + G    A ++F+++   G  PDV T +  IH  C  G + +A  ++
Sbjct: 598 TVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMM 657

Query: 528 LDMEAKNCVPSEVTFCTLLRGF 549
             M     +P  +T+  L+  +
Sbjct: 658 ARMIEAGVMPDSLTYTLLISAY 679



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 179/376 (47%), Gaps = 1/376 (0%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           K  V +YN ++  L +   +D+ K +  +M +  I PN+ T N+++  +  + +  EA  
Sbjct: 176 KLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANL 235

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
              ++   G+ PD  T+ ++I   C++  ++   ++  +M  +G   + V+Y +++ G C
Sbjct: 236 YVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLC 295

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GRI     LF  M    C   V +Y ++I+A   + +  + + L+ EM      P+V 
Sbjct: 296 EAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVH 355

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TY  ++  + +   L ++ +++++M    +VP   T+   I G C+ G +  A+++   +
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM 415

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            +  C     TYN LI G  K   +  A  L  ++      P +VT +++IH  CK G  
Sbjct: 416 ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHF 475

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           D A  LL  ++    VP + T+   +    ++ +  +   L + +  EK + ++  + + 
Sbjct: 476 DSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL-KEKGIKANEVMYTA 534

Query: 581 VVDLLSKDKKYRECLN 596
           ++D   K  K  E ++
Sbjct: 535 LIDGHCKAGKIDEAIS 550


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 160/533 (30%), Positives = 254/533 (47%), Gaps = 54/533 (10%)

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
           R  +  + PD+    +LI+C C  G  +  F  LG+I+++    + V F  L+  LCA+ 
Sbjct: 3   RAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKK 62

Query: 166 RIMEAARL-FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           R  +A  +  +++    C P+V +++TL+ GLC  +    A +L   M+ E G  C PDV
Sbjct: 63  RTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIH-MMAEDGDNCPPDV 121

Query: 225 VTY-----------------------------------NSIIDGLCKDGFVDKAKELLLQ 249
           V+Y                                   NS+IDGLCK   +DKA+ +L Q
Sbjct: 122 VSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQ 181

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D +I PN  TYNSLI G+     W EA  +  EM  +G +P+VVT+N +I+  CK G 
Sbjct: 182 MIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGF 241

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
             +   +   MIQ G  PD  TY SL+ G+   G +     +   MV  G R + ++++I
Sbjct: 242 HAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSI 301

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
            I A CK  ++++A   + +M      P ++TY T++ GL ++G L DA+    +M  + 
Sbjct: 302 EIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDG 361

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P+  TF T I G    G   +A ++F  + +      +  +  +I+ L K G++  A 
Sbjct: 362 LSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQ 421

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           KLF  +   G  P+VV+ +TMIH     G++ +   LL DM      P+ VTF TLL G 
Sbjct: 422 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 481

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           V    K                  D+     ++D   +D +  + L  FR +L
Sbjct: 482 VSMGLK-----------------PDVDTCKTLIDSCCEDGRIEDILTLFREML 517



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 183/354 (51%), Gaps = 22/354 (6%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI     P  T++  L+     + Q+   V + K ++ +G  P++   N+LI+CLCK G 
Sbjct: 182 MIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGF 241

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + A  +   +++S   P+  T+  L++G   EG ++E   +   +       N  TF+ 
Sbjct: 242 HAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSI 301

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
            I   C+      A   F +M  + G +  PD+VTY ++IDGLCK G +D A     QM 
Sbjct: 302 EIYAYCKCGRLDEASLTFIKM-QQLGFM--PDIVTYTTVIDGLCKIGRLDDAMSRFCQMI 358

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           D  ++PN+IT+ +LI GF     W++A+ LF EMMD G+ PDV  F AMI+   K+GK+ 
Sbjct: 359 DDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVT 418

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE-------------------LF 352
           +  +L +LM + G  P+ V+YN+++ G+ + G +    +                   L 
Sbjct: 419 EAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL 478

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
             MVS G + DV +   LI++ C+D ++ED + L+REML +  +   IT N  L
Sbjct: 479 DGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKL 532



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 132/291 (45%), Gaps = 21/291 (7%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D T+    L+     GN+     V   D M++        +F+I +    K  + D    
Sbjct: 260 DATTYGSLLHGYATEGNLVEMNNVK--DLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASL 317

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            F ++   G  PD+     +I+ LCK+G    A     +++    +PN +TF  LI+G  
Sbjct: 318 TFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFS 377

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G+  +A  LF ++      P+V  F  +I+ L +      A KLF+ M     A  KP
Sbjct: 378 MYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPR---AGAKP 434

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +VV+YN++I G    G V +  +LL  M    + P  +T+N+L+ G              
Sbjct: 435 NVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG-------------- 480

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
             M+  G++PDV T   +I+  C+DG+++ +  L   M+ +    DT+T N
Sbjct: 481 --MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 246/517 (47%), Gaps = 56/517 (10%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+T ++  L K  + D    +   L   GL P +   N+L++ LCK G    AF + GR+
Sbjct: 13  SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 72

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
            +   TP+ VTF  LINGL    R  E   + +++      PN V +N LI   CR  + 
Sbjct: 73  EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 132

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL-------------- 248
             AL+LF+EMV +     KP  VTYN I   LCK+G +++A+ +L               
Sbjct: 133 SQALRLFDEMVLK---KMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLF 189

Query: 249 ----------------------QMKDRNINPNVITYNSLICGFC-------CVDDW---- 275
                                 +M  R + PN     + +   C        V  W    
Sbjct: 190 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 249

Query: 276 ------KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
                 KEA  +   M++ G++ D +T+N MI   CKD KM++  +L   M +RG  PD 
Sbjct: 250 NKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDL 309

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            T+N+L+  +C +G++     L   M ++G + D+ SY  +I+ +CK + +  A     E
Sbjct: 310 FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTE 369

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           ++   ++P+V  YN L+ G  + G++  A+  ++ M+ N + P + T+ + +  +C  G 
Sbjct: 370 LMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGL 429

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           V EA  +F   R    +L +  Y  +I G CK+G++  A   F  ++ +G  P+ +T +T
Sbjct: 430 VEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTT 489

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           +++   K G  ++A+ L  +M     +P  +T+ TL+
Sbjct: 490 LMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 224/474 (47%), Gaps = 23/474 (4%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +   EA      M +   +P + +F IL+  LA+ +++  V  + + +   G+ P+
Sbjct: 58  KSGRV--EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPN 115

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             + N LI   C+ G  S A  +   ++     P  VT+N +   LC EG +  A R+ +
Sbjct: 116 EVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILE 175

Query: 176 KLNVFACDPNVVTFNTLINGLC-RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            +       +   FNT++  L  RTR     + +  EMV       +P+     + +  L
Sbjct: 176 DMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRG---MRPNDPLMTACMREL 232

Query: 235 CKDG-----------------FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
           CK G                 ++ +A +++  M ++ I  + ITYN +I G C     +E
Sbjct: 233 CKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEE 292

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  L  +M   G +PD+ TFN +++  C  GKM++   LL+ M   G+ PD V+Y +++D
Sbjct: 293 AIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIID 352

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C    I +A+E    ++ +G + +V+ YN LI    ++  +  A+     M S  I+P
Sbjct: 353 GHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQP 412

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           + +TY +L+  +   G + +A  +  + + N+V      +   I G CK G ++EAV  F
Sbjct: 413 TNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYF 472

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           + +R+        TY  L+    K G  + A KLF  +   G IPD +T  T+I
Sbjct: 473 EEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 216/483 (44%), Gaps = 56/483 (11%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           N  ++  +I  LC  G++     +  +L      P VVT+N L++ LC++     A +L 
Sbjct: 10  NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
             M  E G +  P VVT+  +I+GL +     +   +L +M+   ++PN + YN LI   
Sbjct: 70  GRM--EQGGMT-PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 126

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE----------- 318
           C      +A  LF EM+   ++P  VT+N +    CK+G+M++  R+LE           
Sbjct: 127 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 186

Query: 319 -------------------------LMIQRGVNPDTVTYNSLMDGFCLVGR--------- 344
                                     M+ RG+ P+     + M   C  G+         
Sbjct: 187 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 246

Query: 345 --------ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
                   +  A ++  +M++KG   D  +YNI+I   CKD K+E+A+ L+ +M     +
Sbjct: 247 KTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFK 306

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P + T+NTLL     +G + +   L+D+M+   + PD  ++ T IDG CK   + +A + 
Sbjct: 307 PDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEY 366

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              + +   +  +  YN LI G  + G +  A      ++  G  P  VT  ++++W+C 
Sbjct: 367 LTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCH 426

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            G +++A  +       N     + +  +++G+ +  K  + V    +M +  +  + L+
Sbjct: 427 AGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLT 486

Query: 577 LSS 579
            ++
Sbjct: 487 YTT 489



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 112/243 (46%), Gaps = 1/243 (0%)

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           R V  +  +Y +++   C  G++    E+   +   G +  V +YN+L++A CK  +VE+
Sbjct: 5   RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEE 64

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L   M    + PSV+T+  L++GL +    G+   ++ +M+   V P+   +   I 
Sbjct: 65  AFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIG 124

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
             C+ G   +A+++F  +   K +    TYN +   LCK G ++ A ++   +   G   
Sbjct: 125 WHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTV 184

Query: 503 DVVTCSTMIHWLCKEG-QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
                +T++ WL +   +++    +  +M  +   P++      +R   +  K  + V +
Sbjct: 185 HCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGI 244

Query: 562 LHK 564
             K
Sbjct: 245 WFK 247



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 35/226 (15%)

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           YSY  +I A CK  KV+    +  E+    ++P+V+TYN L+                  
Sbjct: 12  YSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLM------------------ 53

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
                            D LCK+G V EA ++   +        + T+  LINGL +  R
Sbjct: 54  -----------------DALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGER 96

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
                 +   ++  G  P+ V  + +I W C++G   +A  L  +M  K   P+ VT+  
Sbjct: 97  FGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNL 156

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           + +   +  +  +   +L  M +  + V     ++ V  LL + ++
Sbjct: 157 IAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRR 202



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 70/142 (49%)

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
           +V  + +++   I  LCK G V    ++   +     +  + TYN L++ LCK GR++ A
Sbjct: 6   NVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEA 65

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +L  R++  G  P VVT   +I+ L +  +  +   +L +ME     P+EV +  L+  
Sbjct: 66  FRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGW 125

Query: 549 FVQNNKKSKVVVLLHKMAAEKL 570
             +    S+ + L  +M  +K+
Sbjct: 126 HCRKGHCSQALRLFDEMVLKKM 147


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 155/528 (29%), Positives = 265/528 (50%), Gaps = 40/528 (7%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +  +EA  F + M+K K SP + ++++ +  L K ++ D    + K ++  G  P+
Sbjct: 303 KSGRL--DEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPN 360

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             V N LI+  CKMG  S A  +   +L    +PN+VT N LI G C   +I +A  + +
Sbjct: 361 EVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLE 420

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++       N  +F+ +IN LC     + AL    EM+       +P+     +++ GLC
Sbjct: 421 EMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN---LRPNDGLLTTLVSGLC 477

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G   +A EL  ++  +   PN++T N+LI G C   + +E   L  +M++ G+  D +
Sbjct: 478 KAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRI 537

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I+  CK+GK+ +   L E M+++G+ PD  T+N L+ G C   +I  A  L+   
Sbjct: 538 TYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHEC 597

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              G   +VY+Y ++I+  CK  KVE+   L  E++S+++  + + YN+L+      GN+
Sbjct: 598 KKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNM 657

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR------NCKCELRI 469
             A +L D M+   V+    T+++ + GLC  G V +A  +   +R      N  C   I
Sbjct: 658 NAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTI 717

Query: 470 E-----------------------------TYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
                                         TY  +I+G CK+G+ K A KL + +  KG 
Sbjct: 718 IGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGI 777

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           +PD VT +   + LCKEG++++A  +  +M +      E+T+ TL+ G
Sbjct: 778 LPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/541 (28%), Positives = 267/541 (49%), Gaps = 38/541 (7%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A   F  + K    P + + T LL+ L K  +      ++  +   G+ PD+ + + +IN
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK      A  +  ++ +    PN VT+N +I+GLC  GR+ EA R  +K+      P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +++T++  INGL +      A  + +EM +E G +  P+ V YN++IDG CK G + +A 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEM-SELGFV--PNEVVYNTLIDGYCKMGNISEAL 381

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY- 303
           ++   M  + I+PN +T NSLI GFC  D   +A+ +  EM+  G+  +  +F+ +IN+ 
Sbjct: 382 KIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWL 441

Query: 304 ----------------------------------NCKDGKMDKVNRLLELMIQRGVNPDT 329
                                              CK GK  +   L   ++ +G  P+ 
Sbjct: 442 CLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNI 501

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VT N+L+ G C  G +    +L   M+ +G   D  +YN LI+  CK+ KV++   L  E
Sbjct: 502 VTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEE 561

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M+ + I+P + T+N LL GL     + +A +L  + + N  VP+ +T+   IDG CK   
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           V E   +   + + K EL    YN LI   C  G +  A +L   ++ +G +    T S+
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSS 681

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           ++H LC  G +D A  LL +M  +  +P+ V + T++ G+ +  + +KV ++L +M++  
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741

Query: 570 L 570
           +
Sbjct: 742 I 742



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 157/573 (27%), Positives = 287/573 (50%), Gaps = 41/573 (7%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+  +  +  VY F C+  + P   +  F+ ++    K  + D  + LF ++   G+ P+
Sbjct: 233 KANELKKSYEVYDFICLGGIIPDVHL--FSTMINAFCKGHREDDAIGLFSKMEKLGVAPN 290

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N +I+ LCK G    A+    ++++   +P+ +T++  INGL    +I EA  + K
Sbjct: 291 VVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLK 350

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +++     PN V +NTLI+G C+  N   ALK+ ++M+++      P+ VT NS+I G C
Sbjct: 351 EMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG---ISPNSVTLNSLIQGFC 407

Query: 236 KDGFVDKAKELLLQMKDR-----------------------------------NINPNVI 260
           K   + +A+ +L +M  R                                   N+ PN  
Sbjct: 408 KSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDG 467

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
              +L+ G C      EA  L+  ++  G  P++VT NA+I+  CK G M +  +LL  M
Sbjct: 468 LLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDM 527

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           ++RG+  D +TYN+L+ G C  G++    EL   MV KG + D+Y++N+L++  C   K+
Sbjct: 528 LERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKI 587

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A  L+ E       P+V TY  ++ G  +   + +   L++++    +  +S  + + 
Sbjct: 588 DEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSL 647

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I   C NG +  A ++   +++    L   TY+ L++GLC +G +  A  L   ++ +G 
Sbjct: 648 IRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGL 707

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           +P+VV  +T+I    K GQM+K N +L +M + N  P++ T+  ++ GF +  K  +   
Sbjct: 708 LPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAK 767

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           LL++M  EK ++ D    +   + L K+ K  E
Sbjct: 768 LLNEM-TEKGILPDAVTYNAFTNGLCKEGKVEE 799



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 246/487 (50%), Gaps = 3/487 (0%)

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           K+  +     +F  L   GLFP L     L++ L K      ++ V   I      P+  
Sbjct: 198 KHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVH 257

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            F+ +IN  C   R  +A  LF K+      PNVVT+N +I+GLC++     A +  E+M
Sbjct: 258 LFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKM 317

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           V E      P ++TY+  I+GL K   +D+A  +L +M +    PN + YN+LI G+C +
Sbjct: 318 VKE---KVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKM 374

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
            +  EA  +  +M+  G+ P+ VT N++I   CK  ++ +   +LE MI RG+  +  ++
Sbjct: 375 GNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSF 434

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           + +++  CL  R   A      M+ +  R +      L++  CK  K  +AV L+  +L 
Sbjct: 435 SMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLG 494

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           +   P+++T N L+ GL + GN+ + LKL+  M    +V D  T+ T I G CK G V E
Sbjct: 495 KGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKE 554

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
             ++ + +     +  I T+N L++GLC   ++  A +L+H  +  G +P+V T   MI 
Sbjct: 555 GFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMID 614

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             CK  ++++  +LL ++ +K    + V + +L+R +  N   +    L   M +  +++
Sbjct: 615 GYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLL 674

Query: 573 SDLSLSS 579
           S  + SS
Sbjct: 675 SCATYSS 681



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 185/389 (47%), Gaps = 52/389 (13%)

Query: 65  AVYFFDCMI--KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           A++F   M+   ++P+ G+   T L++ L K  +    V L+ RL   G  P++   N L
Sbjct: 450 ALHFIREMLLRNLRPNDGL--LTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNAL 507

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G       +L  +L      + +T+N LI+G C EG++ E   L +++     
Sbjct: 508 IHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGI 567

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK-----PDVVTYNSIIDGLCKD 237
            P++ TFN L++GLC       A +L+ E        CK     P+V TY  +IDG CK 
Sbjct: 568 QPDIYTFNLLLHGLCNADKIDEASRLWHE--------CKKNGYVPNVYTYGVMIDGYCKA 619

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCC----------VDDWK----------- 276
             V++ + LL ++  + +  N + YNSLI  +C            DD K           
Sbjct: 620 NKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATY 679

Query: 277 --------------EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
                         +AK L  EM   G+ P+VV +  +I    K G+M+KVN +L+ M  
Sbjct: 680 SSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSS 739

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
             ++P+  TY  ++DGFC +G+   A +L   M  KG   D  +YN   N  CK+ KVE+
Sbjct: 740 HNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEE 799

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           A  +  EM S  +    ITY TL+ G  Q
Sbjct: 800 AFKVCDEMSSGAVCLDEITYTTLIDGCHQ 828


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 264/504 (52%), Gaps = 6/504 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P + ++T+LL  + K+  +   +++   + + G  P++   N++IN +C+ G 
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L R+    F P+ V++  ++ GLCA  R  +   LF ++    C PN VTF+ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+   CR      A+++ ++M ++ G  C P+    N +I+ +CK G VD A + L  M 
Sbjct: 298 LVRFFCRGGMVERAIQVLQQM-SQHG--CTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 354

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
               NP+ I+Y +++ G C    W+ AK L  EM+     P+ VTFN  I   C+ G ++
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +  +L+ELM + G +   VTYN+L+ GFC+ GR+  A ELF ++    C  +  +Y  L+
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLL 471

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              C  ++++ A  L  EM+ +    + +T+N L+S   Q G + +A++L+++M  +   
Sbjct: 472 TGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 531

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  TF T +DG+ K+    EA+++   + +    L   TY+ +++ L +  R + A ++
Sbjct: 532 PNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQM 591

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            H +Q  G  P V   + ++  LCK  + D+A D    M +  C+P+E T+  L+ G   
Sbjct: 592 LHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAH 651

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDL 575
                +   +L ++ A+ ++   L
Sbjct: 652 EGLLKEARYVLSELYAKGVLSKSL 675



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 224/416 (53%), Gaps = 7/416 (1%)

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            C P+VVT+  L+  +C++     A+ + +EM  +    C P++VTYN II+G+C++G V
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG---CTPNIVTYNVIINGMCREGRV 238

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D AKE+L ++      P++++Y +++ G C    W + K LF EM+D    P+ VTF+ +
Sbjct: 239 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDML 298

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           + + C+ G +++  ++L+ M Q G  P+T   N +++  C  GR+  A +   +M   GC
Sbjct: 299 VRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 358

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D  SY  ++   C+  + E A  L  EM+ +   P+ +T+NT +  L Q G +  A+K
Sbjct: 359 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 418

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           LI+ M          T+   + G C  G V  A+++F    N  CE    TY  L+ GLC
Sbjct: 419 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN---NLPCEPNTITYTTLLTGLC 475

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
              RL  A +L   +  K    + VT + ++ + C++G +++A +L+  M    C P+ +
Sbjct: 476 HAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLI 535

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           TF TLL G  ++    + + LLH + ++ + +  ++ SS VVD+LS++ +  E + 
Sbjct: 536 TFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSS-VVDVLSREDRTEEAIQ 590



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 120/237 (50%)

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           T T      G       S  R    +M+ +GC+  V +Y +L+ A CK     +A+ +  
Sbjct: 152 TPTPTRPSSGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLD 211

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM ++   P+++TYN +++G+ + G + DA ++++++      PD  ++ T + GLC   
Sbjct: 212 EMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAAR 271

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
              +   +F  + + KC     T++ L+   C+ G ++ A ++  ++   G  P+   C+
Sbjct: 272 RWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCN 331

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +I+ +CK+G++D A D L +M    C P  +++ T+LRG  +  +      LL +M
Sbjct: 332 IVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEM 388



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/116 (21%), Positives = 53/116 (45%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S EA+     ++    S    +++ ++ +L++  + +  + +   +   G+ P + + N 
Sbjct: 550 SEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNK 609

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           ++  LCK   T  A      ++ +   PN  T+  LI GL  EG + EA  +  +L
Sbjct: 610 ILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSEL 665


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 264/501 (52%), Gaps = 15/501 (2%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           + +  M+    SP   +  +L+  L  + +++    +F ++   G  P+ F   +L+   
Sbjct: 137 WLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGY 196

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           C+ G++  A  +L  +      PN V +N LI+  C EGR  EA RL +++      P+V
Sbjct: 197 CRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDV 256

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           VTFN+ I+ LC     L A ++F +M ++E   + +P++ T+N +++G CK+G +++AK 
Sbjct: 257 VTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKT 316

Query: 246 LLLQMKDRNIN-PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           L+  MK RN N   + +YN  + G        EA+    EM+D G++P++ +FN +++  
Sbjct: 317 LVESMK-RNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGL 375

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK+G +     ++ LMI  G+ PDTVTY++L+ G C  G++ +A  +   M+ +GC  + 
Sbjct: 376 CKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNT 435

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           Y+ NIL+++  K+ ++ +A  L ++M         +T N ++ GL + G L +A+++++ 
Sbjct: 436 YTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEG 495

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M ++          +   G   N F+     V  +    KC   + TY+ +INGLCK GR
Sbjct: 496 MWIH---------GSAALGNLGNSFI---GLVDSSSNGKKCLPDLITYSIIINGLCKAGR 543

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           L  A K F  +  K   PD +   T IH  CK G++  A  +L DME + C  S  T+ +
Sbjct: 544 LDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNS 603

Query: 545 LLRGFVQNNKKSKVVVLLHKM 565
           L+ G    N+  ++  LL  M
Sbjct: 604 LILGLGSKNQIFEIYGLLDDM 624



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 242/499 (48%), Gaps = 33/499 (6%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S  A+   D M      P    +  L++   +  + +    L +R+  +GLFPD+   N 
Sbjct: 202 SMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNS 261

Query: 122 LINCLCKMGITSGAFVVLGRILR--------SCFTPNTVTFNFLINGLCAEGRIMEAARL 173
            I+ LC    ++G  +   RI R            PN  TFN ++ G C EG + EA  L
Sbjct: 262 RISALC----SAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTL 317

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            + +        + ++N  + GL R    L A    +EMV++     +P++ ++N+++DG
Sbjct: 318 VESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKG---IEPNIYSFNTVMDG 374

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK+G +  A+ ++  M    I P+ +TY++L+ G C      +A  +  EMM  G  P+
Sbjct: 375 LCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPN 434

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
             T N +++   K+G++ +  +LL+ M +R  + D VT N ++DG C  G++  A E+  
Sbjct: 435 TYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVE 494

Query: 354 SMVSKGCR---HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
            M   G     +   S+  L++++   +K     CL          P +ITY+ +++GL 
Sbjct: 495 GMWIHGSAALGNLGNSFIGLVDSSSNGKK-----CL----------PDLITYSIIINGLC 539

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + G L +A K   +M    + PDS  + T+I   CK+G +  A +V + +    C   ++
Sbjct: 540 KAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQ 599

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYN LI GL    ++     L   ++ KG  P++ T + MI  LC+ G++  A  LL +M
Sbjct: 600 TYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEM 659

Query: 531 EAKNCVPSEVTFCTLLRGF 549
             K   P+  +F  L++ F
Sbjct: 660 LQKGISPNISSFRLLIKAF 678



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 240/500 (48%), Gaps = 56/500 (11%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + S+ I L  L +N +        K +   G+ P+++  N +++ LCK G+ S A +++G
Sbjct: 330 LESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMG 389

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            ++ S   P+TVT++ L++G C+ G++++A  +  ++    C PN  T N L++ L +  
Sbjct: 390 LMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEG 449

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A KL ++M NE       D VT N +IDGLCK G +D+A E++  M          
Sbjct: 450 RIFEAEKLLQKM-NERSY--DLDNVTCNIVIDGLCKSGKLDEAVEIVEGM---------- 496

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ--PDVVTFNAMINYNCKDGKMDKVNRLLE 318
                I G   + +   +    ++   NG +  PD++T++ +IN  CK G++D+  +   
Sbjct: 497 ----WIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFI 552

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+ + ++PD++ Y++ +  FC  G+IS A  +   M  +GC   + +YN LI       
Sbjct: 553 EMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKN 612

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           ++ +   L  +M  + I P++ TYN ++S L + G + DA  L+D+M    + P+  +F 
Sbjct: 613 QIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFR 672

Query: 439 TYIDGLCK----------------------------------NGFVLEAVQVFQAIRNCK 464
             I   CK                                   G V EA ++F A  +  
Sbjct: 673 LLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRC 732

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +L    YN LI  LCK   L+ A  + H++  KG   D  +   +I  L K G+   A+
Sbjct: 733 FDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDAD 792

Query: 525 DL---LLDMEAKNCVPSEVT 541
           +L   ++DM ++  V +++T
Sbjct: 793 ELAERMMDMASEGMVENKIT 812



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 206/413 (49%), Gaps = 6/413 (1%)

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           V+   LI  L ++  + +A   F+   ++  A   P V  YN +++   ++  VD    L
Sbjct: 80  VSLIALIRILAKSGLSDLAFSQFQSFRSQVPA-NPPPVYLYNMVLESSLREDKVDSFSWL 138

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
              M    ++P   T N LI G C    +++A+ +F +M   G +P+  +F  ++   C+
Sbjct: 139 YKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCR 198

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G   +   LL+ M   GV P+ V YN+L+  FC  GR   A  L   M   G   DV +
Sbjct: 199 AGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVT 258

Query: 367 YNILINANCKDQKVEDAVCLYREM-LSERI---RPSVITYNTLLSGLFQVGNLGDALKLI 422
           +N  I+A C   K+ +A  ++R+M + E +   RP++ T+N +L G  + G L +A  L+
Sbjct: 259 FNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLV 318

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M+ N  + +  ++  ++ GL +NG +LEA    + + +   E  I ++N +++GLCK 
Sbjct: 319 ESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKN 378

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G +  A  +   +   G  PD VT ST++H  C  G++ KAN++L +M  + C P+  T 
Sbjct: 379 GLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTC 438

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
             LL    +  +  +   LL KM      + +++ +  V+D L K  K  E +
Sbjct: 439 NILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNI-VIDGLCKSGKLDEAV 490



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 112/288 (38%), Gaps = 44/288 (15%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           F++   K G I+S  A      M K   +  + ++  L+  L    Q   +  L   +  
Sbjct: 569 FIHSFCKHGKISS--AFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKE 626

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ P++   N +I+CLC+ G    A  +L  +L+   +PN  +F  LI   C       
Sbjct: 627 KGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCK------ 680

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
                      A D  VV                   ++FE  +    +IC      Y+ 
Sbjct: 681 -----------ASDFGVVK------------------EVFEIAL----SICGHKEALYSL 707

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           + + L   G V +AKEL     DR  +     YN LI   C  +  + A  +  +M+D G
Sbjct: 708 MFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKG 767

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMI---QRGVNPDTVTYNS 334
            + D  +F  +I+   K GK    + L E M+     G+  + +T N 
Sbjct: 768 YRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVENKITRNE 815


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 262/528 (49%), Gaps = 11/528 (2%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           T I  F  + H+       EA   F+ M+ +   P + +F  L+  L +         L 
Sbjct: 186 TVIGGFYEENHRV------EAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLL 239

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
            ++   G+ P+LF +N+ I   C+  + + A  +L  + R   TP+ +T+N LI GLC  
Sbjct: 240 NKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRG-LTPDVITYNTLICGLCKN 298

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
            +++EA    +K+     +P+  T+N++I+G C+      A ++  +    F     PD 
Sbjct: 299 FKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRD--GAFKGFV-PDE 355

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
            TY S+I+GLC+DG +D+A  +  +  ++ + PN++  N+L+ G        +A  L  E
Sbjct: 356 STYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNE 415

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M +NG  PD+ T+N +IN  CK G +   + L+   I +G  PD  T+N+L+DG+C   +
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A E+   M + G   DV +YN ++N  CK  K ED +  ++ M+ +   P++ITYN 
Sbjct: 476 LDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNI 535

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNC 463
           L     +   + +AL LI++MQ   + PD   F T + G C NG +  A Q+F+ +    
Sbjct: 536 LTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQY 595

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           K    I TYN +IN       +  A KLF+++   G  PD  T   MI   CK G ++  
Sbjct: 596 KFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSG 655

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
              LL    K  +PS  TF  +L       +  + V ++H M  + +V
Sbjct: 656 YSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIV 703



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 248/489 (50%), Gaps = 4/489 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV  F+ M      P + S+  ++ +L + + +D    ++ R+   G+ PD++   + +
Sbjct: 94  EAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRM 153

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+      A  +L  +       + V +  +I G   E   +EA  LF+++      
Sbjct: 154 KSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGIC 213

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+++ FN LI+ LCR  +   + +L  +++        P++ T N  I G C+   +++A
Sbjct: 214 PDIMAFNKLIHTLCRKGHVQESERLLNKVLKRG---VSPNLFTVNIFIQGFCQRAMLNEA 270

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL  +  R + P+VITYN+LICG C      EA+    +M++ G +PD  T+N++I+ 
Sbjct: 271 IRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDG 329

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G M   +++L     +G  PD  TY SL++G C  G I RA  +F   + KG + +
Sbjct: 330 YCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPN 389

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           +   N L+    +   +  A+ L  EM      P + TYN +++GL ++G + DA  L+ 
Sbjct: 390 LVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVI 449

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
                  +PD FTF T IDG CK   +  A+++   + N      + TYN ++NGLCK G
Sbjct: 450 DAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAG 509

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           + +     F  +  KG +P+++T + +    CK  ++++A +L+ +M+ K   P  V F 
Sbjct: 510 KYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFG 569

Query: 544 TLLRGFVQN 552
           TL++GF  N
Sbjct: 570 TLMKGFCDN 578



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 234/439 (53%), Gaps = 5/439 (1%)

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           +G+I EA  +F++++ F C+P+V ++N ++N L   R    A K++  M ++ G +  PD
Sbjct: 89  KGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDK-GIV--PD 145

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V T+   +   C+      A+ LL  M  +    + + Y ++I GF   +   EA  LF 
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM+  G+ PD++ FN +I+  C+ G + +  RLL  +++RGV+P+  T N  + GFC   
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            ++ A  L +  V +G   DV +YN LI   CK+ KV +A    R+M++E   P   TYN
Sbjct: 266 MLNEAIRL-LDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYN 324

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +++ G  ++G + +A +++        VPD  T+ + I+GLC++G +  A+ VF      
Sbjct: 325 SIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEK 384

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +  +   N L+ GL + G +  A KL + +   G  PD+ T + +I+ LCK G +  A
Sbjct: 385 GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDA 444

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           ++L++D  AK  +P   TF TL+ G+ +  K    + ++ +M     V  D+   + +++
Sbjct: 445 DNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG-VSPDVITYNSILN 503

Query: 584 LLSKDKKYRECLNQFRHLL 602
            L K  KY + +  F+ ++
Sbjct: 504 GLCKAGKYEDVMGTFKLMM 522



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 194/439 (44%), Gaps = 69/439 (15%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+   D  +    +P + ++  L+  L KN +        +++ + G  PD F  N +
Sbjct: 268 NEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK+G+   A  +L       F P+  T+  LINGLC +G I  A  +F +      
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------FGAICK--------- 221
            PN+V  NTL+ GL +    L ALKL  EM                  +CK         
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADN 446

Query: 222 -----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                      PDV T+N++IDG CK   +D A E++ +M +  ++P+VITYNS++ G C
Sbjct: 447 LVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLC 506

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
               +++    F  MM+ G  P+++T+N +    CK  K+++   L+E M  +G+ PD V
Sbjct: 507 KAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVV 566

Query: 331 TYNSLMDGFC----------LVGRISR--------------------------ARELFVS 354
            + +LM GFC          L  R+                            A +LF  
Sbjct: 567 NFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNK 626

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M   G   D Y+Y ++I+  CK   +          + + + PS+ T+  +L+ L     
Sbjct: 627 MCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRR 686

Query: 415 LGDALKLIDKMQLNDVVPD 433
           + +A+ +I  M    +VP+
Sbjct: 687 VHEAVGIIHLMVHKGIVPE 705



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 188/383 (49%), Gaps = 10/383 (2%)

Query: 23  WCSFGRPPNPKTDLSSHHFK----DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS 78
           +C  G   N    L    FK    D ++    +N   + G+I  + A+  F+  ++    
Sbjct: 330 YCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDI--DRAINVFNEAMEKGLK 387

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +     L+  L++       + L   ++ NG  PD++  NL+IN LCK+G  S A  +
Sbjct: 388 PNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNL 447

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +   +     P+  TFN LI+G C + ++  A  +  ++      P+V+T+N+++NGLC+
Sbjct: 448 VIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCK 507

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                  +  F+ M+ +    C P+++TYN + +  CK   V++A  L+ +M+++ + P+
Sbjct: 508 AGKYEDVMGTFKLMMEKG---CVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPD 564

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           V+ + +L+ GFC   D   A  LF  + +       + T+N MIN       M+   +L 
Sbjct: 565 VVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLF 624

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + G +PD+ TY  ++DGFC  G I+      +  + KG    + ++  ++N  C  
Sbjct: 625 NKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLK 684

Query: 378 QKVEDAVCLYREMLSERIRPSVI 400
           ++V +AV +   M+ + I P V+
Sbjct: 685 RRVHEAVGIIHLMVHKGIVPEVV 707



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 195/390 (50%), Gaps = 7/390 (1%)

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
           +N L AL++F  +  E G   K  ++TY  +I+ L   G  +  +E+L + +  NI+  +
Sbjct: 18  KNPLKALEIFNSVKKEDGF--KHTLLTYKGMIEKLGFHGEFEAMEEVLAETR-MNIDNGL 74

Query: 260 I--TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +   Y   +  +      +EA  +F  M     +P V ++NA++N   +    D+ +++ 
Sbjct: 75  LEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVY 134

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M  +G+ PD  T+   M  FC   R   AR L  +M S+GC     +Y  +I    ++
Sbjct: 135 MRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEE 194

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
               +A  L+ EML   I P ++ +N L+  L + G++ ++ +L++K+    V P+ FT 
Sbjct: 195 NHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTV 254

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
             +I G C+   + EA+++   +        I TYN LI GLCK  ++  A     ++ +
Sbjct: 255 NIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVI-TYNTLICGLCKNFKVVEAEHYLRKMVN 313

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +G  PD  T +++I   CK G M  A+ +L D   K  VP E T+C+L+ G  Q+    +
Sbjct: 314 EGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDR 373

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            + + ++ A EK +  +L L + +V  LS+
Sbjct: 374 AINVFNE-AMEKGLKPNLVLCNTLVKGLSQ 402


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 241/463 (52%), Gaps = 5/463 (1%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F D  +    ++ R ++G+  +  A+   D M+     PG+ ++  +L  L ++  +D  
Sbjct: 188 FPDVVTHNVMVDARFRAGD--AEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKA 245

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
             +FK ++  G+ PD+    +LI   C++G    A  +   +      P+ V+F+ LI  
Sbjct: 246 WEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGL 305

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
               G++  A    +++  F   P+ V +  +I G CR      AL++ +EMV   G  C
Sbjct: 306 FARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV---GCGC 362

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PDVVTYN++++GLCK+  +  A+ LL +M++R + P++ T+ +LI G+C      +A  
Sbjct: 363 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 422

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF  M++  ++PD+VT+N +I+  C+ G +DK N L + M  R + P+ VTY+ L+D  C
Sbjct: 423 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 482

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G++  A      M++KG   ++ +YN +I   C+   V       ++M+  ++ P +I
Sbjct: 483 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 542

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYNTL+ G  +   + DA KL++ M+   V PD  T+   I+G   +G V EA  +F+ +
Sbjct: 543 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 602

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
                E    TY  +ING    G  K A +L   +  +G  PD
Sbjct: 603 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 246/491 (50%), Gaps = 36/491 (7%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++    K  ++D V ++   +    +FPD+   N++++   + G    A  ++  +
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +     P  VT+N ++ GLC  G   +A  +FK+++ F   P+V +F  LI G CR    
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277

Query: 203 LVALKLFEEMVNE----------------------------------FGAICKPDVVTYN 228
             ALK+++EM +                                   FG +  PD V Y 
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLV--PDGVIYT 335

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +I G C+ G +  A  +  +M      P+V+TYN+L+ G C      +A+ L  EM + 
Sbjct: 336 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           GV PD+ TF  +I+  C +GK+DK  +L + M+ + + PD VTYN+L+DG C  G + +A
Sbjct: 396 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 455

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            +L+  M S+    +  +Y+ILI+++C+  +VEDA     EM+++ I P+++TYN+++ G
Sbjct: 456 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 515

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             + GN+    K + KM +N V PD  T+ T I G  K   + +A ++   +   K +  
Sbjct: 516 YCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 575

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + TYN LING    G ++ A  +F ++  KG  PD  T  +MI+     G   +A  L  
Sbjct: 576 VVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHD 635

Query: 529 DMEAKNCVPSE 539
           +M  +   P +
Sbjct: 636 EMLQRGFAPDD 646



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 224/421 (53%), Gaps = 3/421 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           NT T N +++  C      +   +  ++      P+VVT N +++   R  +   A+ L 
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           + MV++     KP +VTYNS++ GLC+ G  DKA E+  +M D  + P+V ++  LI GF
Sbjct: 215 DSMVSKG---LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGF 271

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C V + +EA  ++ EM   G++PD+V+F+ +I    + GKMD     L  M   G+ PD 
Sbjct: 272 CRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 331

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           V Y  ++ GFC  G +S A  +   MV  GC  DV +YN L+N  CK++++ DA  L  E
Sbjct: 332 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 391

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    + P + T+ TL+ G    G L  AL+L D M    + PD  T+ T IDG+C+ G 
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A  ++  + + +      TY+ LI+  C+ G+++ A      + +KG +P+++T ++
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I   C+ G + K    L  M      P  +T+ TL+ G+++ +K      LL+ M  EK
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571

Query: 570 L 570
           +
Sbjct: 572 V 572



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 216/408 (52%), Gaps = 5/408 (1%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK-PDVVTYNSIIDGLCKDGFVDKA 243
           N  T N +++  C+     +     + +++E    C  PDVVT+N ++D   + G  + A
Sbjct: 155 NTYTLNIMVHNYCKA----LEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 210

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L+  M  + + P ++TYNS++ G C    W +A  +F EM D GV PDV +F  +I  
Sbjct: 211 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 270

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G++++  ++ + M  RG+ PD V+++ L+  F   G++  A      M   G   D
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPD 330

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              Y ++I   C+   + DA+ +  EM+     P V+TYNTLL+GL +   L DA  L++
Sbjct: 331 GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 390

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+   V PD  TF T I G C  G + +A+Q+F  + N +    I TYN LI+G+C+ G
Sbjct: 391 EMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 450

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            L  A  L+  +  +   P+ VT S +I   C++GQ++ A   L +M  K  +P+ +T+ 
Sbjct: 451 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 510

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
           ++++G+ ++   SK    L KM   K+    ++ ++ +   + +DK +
Sbjct: 511 SIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 558


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 251/493 (50%), Gaps = 29/493 (5%)

Query: 64  EAVYFFDCMIKMKPSPGMT-SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +A+  +  M+     P  T +F +    L +  + D  ++L + +  +G  PD  +   +
Sbjct: 157 DALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTV 216

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC  G  + A  +L  +L      +  TF+ ++ G+C  GR+ EAARL  ++    C
Sbjct: 217 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 276

Query: 183 DPNVVTFNTLINGLCRTR--------------------NTLVALKLFEEMVNEFGAI--- 219
            P V+T+  L+ GLCR R                    NT++   L E  + E   +   
Sbjct: 277 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYET 336

Query: 220 -----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                C+PD  TY+ ++ GLCK G +  A  LL +M+ +   PNV+TY  ++  FC    
Sbjct: 337 MGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGM 396

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           W + + L  EM   G+  +   +N MI   CKDG+MD+   L++ M  +G NPD  +YN+
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 456

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           ++   C   ++  A  +F +++ +G   +  +YN +I+A  +D + +DAV L +EM+   
Sbjct: 457 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
               V++YN L+  + + GN+  +L L+++M    + P++ ++   I  LCK   V +A+
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           ++ + + N      I TYN LINGLCKMG +  A  L  +L ++   PD++T + +I W 
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 636

Query: 515 CKEGQMDKANDLL 527
           CK   +D A  LL
Sbjct: 637 CKVRLLDDAAMLL 649



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 250/492 (50%), Gaps = 8/492 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAF 136
            P   S+ ++L++LA+   +   ++L++R+ + + + P  F   +    LC++G    A 
Sbjct: 136 QPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEAL 195

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +L  + R    P+ V +  +I+ LC +G + EAA L  ++ +  C  +V TF+ ++ G+
Sbjct: 196 ALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGM 255

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C       A +L + M+ +    C P V+TY  ++ GLC+    D+A+ +L ++ + N  
Sbjct: 256 CGLGRVREAARLVDRMMTKG---CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN-- 310

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
             V+ +N++I G        EA  L+  M   G QPD  T++ +++  CK G++    RL
Sbjct: 311 --VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRL 368

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L  M ++G  P+ VTY  ++  FC  G     R L   M +KG   +   YN +I A CK
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 428

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           D ++++A+ L +EM S+   P + +YNT++  L     + +A  + + +    VV +  T
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + T I  L ++G   +AV++ + +    C L + +YN LI  +CK G +  +  L   + 
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG  P+ V+ + +I  LCKE ++  A +L   M  +   P  VT+ TL+ G  +     
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 608

Query: 557 KVVVLLHKMAAE 568
             + LL K+  E
Sbjct: 609 AALNLLEKLHNE 620



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 227/455 (49%), Gaps = 9/455 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           P+  ++N +++ L       +A  L++++ +     P   TF      LCR      AL 
Sbjct: 137 PSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALA 196

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L   M       C PD V Y ++I  LC  G V +A  LL +M       +V T++ ++ 
Sbjct: 197 LLRGMARHG---CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C +   +EA  L   MM  G  P V+T+  ++   C+  + D+       M+ R    
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPEL 309

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + V +N+++ G    G+++ A EL+ +M  KGC+ D ++Y+IL++  CK  ++  AV L 
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 369

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           REM  +   P+V+TY  +L    + G   D   L+++M    +  +S  +   I  LCK+
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + EA+ + Q +R+  C   I +YN +I  LC   +++ A  +F  L  +G + + +T 
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 489

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +T+IH L ++G+   A  L  +M    C    V++  L++   ++    + +VLL +MA 
Sbjct: 490 NTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 549

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           + +  +++S +  ++  L K+++ R+ L   + +L
Sbjct: 550 KGIKPNNVSYNI-LISELCKERRVRDALELSKQML 583



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 32/239 (13%)

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGD 417
           G +    SYN++++   +     DA+ LYR M+  +R+ P+  T+      L ++G   +
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           AL L+  M  +  VPD+  + T I  LC  G V EA  +   +    C   + T++ ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK--------------------- 516
           G+C +GR++ A +L  R+  KG +P V+T   ++  LC+                     
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL 313

Query: 517 ----------EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
                     EG++ +A +L   M  K C P   T+  L+ G  +  +    V LL +M
Sbjct: 314 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 3/193 (1%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           H   N    EA + F+ +++        ++  ++  L ++ ++   V L K +  +G   
Sbjct: 460 HLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSL 519

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D+   N LI  +CK G    + V+L  +      PN V++N LI+ LC E R+ +A  L 
Sbjct: 520 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 579

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           K++      P++VT+NTLINGLC+      AL L E++ NE      PD++TYN +I   
Sbjct: 580 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEN---VHPDIITYNILISWH 636

Query: 235 CKDGFVDKAKELL 247
           CK   +D A  LL
Sbjct: 637 CKVRLLDDAAMLL 649


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 262/509 (51%), Gaps = 12/509 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  ++    +P   ++ +L+    K  Q    VS+F  + S+GL P+   +N L
Sbjct: 14  DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 73

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC++G  S A  +   +    F P + + N L+ G    GR+ +A    + +   + 
Sbjct: 74  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSS 133

Query: 183 DPNVVTFNTLINGLC---RTRNTL-VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                T+N ++ GLC   ++ N L  A++ F+EM     +  +PD+ +Y+ ++  L   G
Sbjct: 134 SVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMK---ASGVEPDLESYHILLSALSDSG 190

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            + +A  L   M     +P+++TYN L+ G+C +    EA+ L  E++  G +P+V T++
Sbjct: 191 RMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYS 247

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +IN  CK  K+++   +   MI+    P+ VT+N+L+ GFC  G +  A +LF  M   
Sbjct: 248 IIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI 307

Query: 359 GCRHDVYSYNILINANCKDQK-VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           GC+  + +YN LI++ CK +  V  AV L+ ++    + P+++TYN+L+ G      L +
Sbjct: 308 GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSE 367

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A++  D+M+     P+  T++  IDGLCK   + EA +  + ++       + TY  LIN
Sbjct: 368 AMQYFDEME-GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLIN 426

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G CK G LK+A   F +++  G  P+ V  +T+I  LCK  + +    LL  M A+ C P
Sbjct: 427 GFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKP 486

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
             +T+  L+ G    N+      L   MA
Sbjct: 487 DVITYNCLISGLCSANRVEDAQRLFDGMA 515



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/451 (32%), Positives = 227/451 (50%), Gaps = 12/451 (2%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N L++ L        A  +   +L   F PN  T+N LI G C  G++ +A  +F  +  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               PN  T NTL+ GLC       ALKLF EM  + G    P   ++N ++ G    G 
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREM--QAGPFL-PTSASHNILLRGFFMAGR 117

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFC----CVDDWKEAKCLFIEMMDNGVQPDVV 295
           V  A   L  M+  + +    TYN ++ G C      +  ++A   F EM  +GV+PD+ 
Sbjct: 118 VRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLE 177

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           +++ +++     G+M + + L   M     +PD +TYN LMDG+C +G+   A+ L   +
Sbjct: 178 SYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +  G   +V++Y+I+IN  CK  KVE+A  ++ +M+     P+ +T+NTL++G  + G L
Sbjct: 235 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGML 294

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKN-GFVLEAVQVFQAIRNCKCELRIETYNC 474
            DA+KL  +M+         T+ T ID LCK  G V  AV +F  +        I TYN 
Sbjct: 295 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS 354

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI G C   RL  A + F  ++ K   P+V+T S +I  LCK  +M +A   L DM+A  
Sbjct: 355 LIQGFCDARRLSEAMQYFDEMEGKCA-PNVITYSILIDGLCKVRRMKEAAKTLEDMKAHG 413

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             P+ VT+  L+ GF +  +    ++   KM
Sbjct: 414 YTPTVVTYGGLINGFCKCGELKSALLFFEKM 444



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 141/396 (35%), Positives = 208/396 (52%), Gaps = 11/396 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+ FF  M      P + S+ ILL+ L+ + +     +LF  +  +   PD+   N+L
Sbjct: 158 EQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVL 214

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK+G T  A  ++  IL++ + PN  T++ +IN  C   ++ EA  +F K+    C
Sbjct: 215 MDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNC 274

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD-GFVD 241
            PN VTFNTLI G C+      A+KLF EM  + G  CK  +VTYN++ID LCK  G V 
Sbjct: 275 VPNAVTFNTLIAGFCKAGMLEDAIKLFAEM-EKIG--CKATIVTYNTLIDSLCKKRGGVY 331

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A +L  +++   + P ++TYNSLI GFC      EA   F EM +    P+V+T++ +I
Sbjct: 332 TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILI 390

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK  +M +  + LE M   G  P  VTY  L++GFC  G +  A   F  M   GC 
Sbjct: 391 DGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCA 450

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +   +N LI+  CK ++  D + L   M +E  +P VITYN L+SGL     + DA +L
Sbjct: 451 PNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 510

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            D M      P+  TF   I GLC    V EA  + 
Sbjct: 511 FDGMA---CAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 150/505 (29%), Positives = 248/505 (49%), Gaps = 50/505 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F  M      P  ++   LL  L +  Q  + + LF+ + +    P     N+L
Sbjct: 49  HQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNIL 108

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE------------------ 164
           +      G    A   L  + +S  +  T T+N ++ GLC E                  
Sbjct: 109 LRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMK 168

Query: 165 ---------------------GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                                GR+ EA  LF  +    C P+++T+N L++G C+   T 
Sbjct: 169 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTY 225

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  L +E++    A  +P+V TY+ II+  CK   V++A E+ ++M + N  PN +T+N
Sbjct: 226 EAQSLMKEILK---AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFN 282

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD-GKMDKVNRLLELMIQ 322
           +LI GFC     ++A  LF EM   G +  +VT+N +I+  CK  G +     L   +  
Sbjct: 283 TLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEG 342

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G+ P  VTYNSL+ GFC   R+S A + F  M  K C  +V +Y+ILI+  CK +++++
Sbjct: 343 AGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKE 401

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A     +M +    P+V+TY  L++G  + G L  AL   +KM+L    P++  F T ID
Sbjct: 402 AAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLID 461

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK     + +++   +    C+  + TYNCLI+GLC   R++ A +LF  +      P
Sbjct: 462 GLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAP 518

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLL 527
           +V T + +I  LC + ++++A ++L
Sbjct: 519 NVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 241/487 (49%), Gaps = 12/487 (2%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           LL+ L   +++D  + LFK + +    P+    N+LI   CK G    A  V   +  S 
Sbjct: 3   LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             PN  T N L+ GLC  G++  A +LF+++      P   + N L+ G         AL
Sbjct: 63  LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG----FVDKAKELLLQMKDRNINPNVITY 262
              ++M     ++      TYN ++ GLC +      +++A E   +MK   + P++ +Y
Sbjct: 123 AHLQDMRKSSSSVATG---TYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + L+          EA  LF  M      PD++T+N +++  CK G+  +   L++ +++
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G  P+  TY+ +++ +C + ++  A E+F+ M+   C  +  ++N LI   CK   +ED
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 296

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQV-GNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           A+ L+ EM     + +++TYNTL+  L +  G +  A+ L +K++   + P   T+ + I
Sbjct: 297 AIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 356

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            G C    + EA+Q F  +   KC   + TY+ LI+GLCK+ R+K A K    ++  G  
Sbjct: 357 QGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYT 415

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P VVT   +I+  CK G++  A      M+   C P+ V F TL+ G  +  + +  + L
Sbjct: 416 PTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRL 475

Query: 562 LHKMAAE 568
           L  M AE
Sbjct: 476 LCHMHAE 482



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/392 (33%), Positives = 200/392 (51%), Gaps = 21/392 (5%)

Query: 33  KTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLA 92
           + DL S+H          L+    SG +    A++       M  SP + ++ +L+    
Sbjct: 173 EPDLESYHI--------LLSALSDSGRMAEAHALF-----SAMTCSPDIMTYNVLMDGYC 219

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           K  Q     SL K +   G  P++F  +++INC CK+     A+ V  +++ S   PN V
Sbjct: 220 KIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV 279

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL-VALKLFEE 211
           TFN LI G C  G + +A +LF ++    C   +VT+NTLI+ LC+ R  +  A+ LF +
Sbjct: 280 TFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNK 339

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           +    GA   P +VTYNS+I G C    + +A +   +M+ +   PNVITY+ LI G C 
Sbjct: 340 LE---GAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCK 395

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
           V   KEA     +M  +G  P VVT+  +IN  CK G++       E M   G  P+TV 
Sbjct: 396 VRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVI 455

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           +N+L+DG C   R +    L   M ++GC+ DV +YN LI+  C   +VEDA  L+  M 
Sbjct: 456 FNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM- 514

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
                P+V T+N L+ GL     + +A  ++D
Sbjct: 515 --ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 271/539 (50%), Gaps = 39/539 (7%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           +F+ ++++ P P + +F+ L+    K    D    LF  +  NG+ PDL V ++LI+ L 
Sbjct: 294 YFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLF 353

Query: 128 K-----------------------MGITSG--AFVVLG----------RILRSCFTPNTV 152
           K                       +G +S   A+V +G          R+L    +PN V
Sbjct: 354 KAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVV 413

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           + + LI G C  GRI+EA  LF ++     +P+++T++ LI G C++ N      L+E+M
Sbjct: 414 SCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM 473

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           + +    C+PD + Y+ +I+GLCK G V  A     Q  +R ++PNV T N+L+  FC +
Sbjct: 474 IKK---RCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRL 530

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                A  ++  M    ++ D VT+  +I    + G++D+   L   M+++   PD +TY
Sbjct: 531 KCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITY 590

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
            +L+DG C + + S    +F  M       D+  YN+LIN + ++  +E A+ L+  ++ 
Sbjct: 591 CTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVE 650

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
              +P V T+NT++        L DA++L  KM    + P++ TF   ID  C+ G + +
Sbjct: 651 RGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDD 710

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCK-MGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           A+ +F  +     E  + TY+CLI+G  K    +++  KL++ +      P++V+ S +I
Sbjct: 711 AMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILI 770

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             LCK G M +A+        K+ +P  + +  L+RG+ +  + ++ ++L   M   +L
Sbjct: 771 DGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRL 829



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/455 (30%), Positives = 240/455 (52%), Gaps = 11/455 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+    SP + S +IL+    +N +      LF ++   G  P +   + LI   CK G 
Sbjct: 403 MLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGN 462

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
               F +   +++    P+T+ ++ LINGLC +G + +A R F +       PNV T NT
Sbjct: 463 LRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNT 522

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           L++  CR +  + A+K++  M    G +  K D VTY  +I G  + G VD+A  L  QM
Sbjct: 523 LLDSFCRLKCIVGAMKVYYLM----GMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQM 578

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
             ++  P+VITY +LI G C +       C+F  M  N V PD+  +N +IN + ++G +
Sbjct: 579 LKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHL 638

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           +    L   +++RG  PD  T+N+++  +C   R+  A +LF  M S+  R +  ++ IL
Sbjct: 639 EAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTIL 698

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA-LKLIDKMQLND 429
           I+A C++ +++DA+ ++ +ML E   P+++TY+ L+ G F+  ++ ++ LKL ++M  N+
Sbjct: 699 IDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENN 758

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P+  +++  IDGLCK G + EA   F+   +      +  Y  LI G CK+GRL  A 
Sbjct: 759 IAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAM 818

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            L+  +      PD     T+     +E Q+ KA 
Sbjct: 819 MLYDNMLLNRLTPDRFLERTL-----EEYQLKKAG 848



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 245/486 (50%), Gaps = 3/486 (0%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P++   + LI+  CK G    AFV+   +  +  TP+ + ++ LI+GL   GR+ +  RL
Sbjct: 305 PNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRL 364

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
                      +VV F++ ++   +  +    +++++ M+NE      P+VV+ + +I G
Sbjct: 365 LLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEG---ISPNVVSCSILIKG 421

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            C++G + +A  L +Q+      P+++TY++LI GFC   + ++   L+ +M+    +PD
Sbjct: 422 FCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPD 481

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            + ++ +IN  CK G +    R     + RG++P+  T N+L+D FC +  I  A +++ 
Sbjct: 482 TIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYY 541

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M     + D  +Y ILI    +  +V++A+ L+ +ML +  +P VITY TL+ GL ++ 
Sbjct: 542 LMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLK 601

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
                L + D M  N V PD   +   I+   + G +  A+ +F  +     +  + T+N
Sbjct: 602 KSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFN 661

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +I   C   RL  A +LF ++  +   P+ +T + +I   C+EG+MD A  +   M  +
Sbjct: 662 TMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEE 721

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
              P+ VT+  L+ G+ ++    +  + L+    E  +  ++   S ++D L K    +E
Sbjct: 722 GPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKE 781

Query: 594 CLNQFR 599
               FR
Sbjct: 782 ASCAFR 787



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 201/381 (52%), Gaps = 6/381 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSGN+   +  Y ++ MIK +  P    +++L+  L K       +  F +  + GL P+
Sbjct: 459 KSGNL--RDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPN 516

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F LN L++  C++    GA  V   +       +TVT+  LI G    GR+ EA  LF 
Sbjct: 517 VFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFF 576

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P+V+T+ TLI+GLC+ + +   L +F+ M     A   PD+  YN +I+   
Sbjct: 577 QMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVA---PDIAIYNVLINMHS 633

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           ++G ++ A  L + + +R   P+V T+N++IC +C      +A  LF +M    ++P+ +
Sbjct: 634 REGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAI 693

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG-FCLVGRISRARELFVS 354
           TF  +I+  C++G+MD    +   M++ G  P+ VTY+ L+ G F     +    +L+  
Sbjct: 694 TFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNE 753

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M+      ++ SY+ILI+  CK   +++A C +R  L + + P VI Y  L+ G  +VG 
Sbjct: 754 MLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGR 813

Query: 415 LGDALKLIDKMQLNDVVPDSF 435
           L +A+ L D M LN + PD F
Sbjct: 814 LTEAMMLYDNMLLNRLTPDRF 834



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 252/554 (45%), Gaps = 39/554 (7%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  L+    +   +D  V +F  +   G+F    V+ LL+  L             G + 
Sbjct: 170 YGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELC 229

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
            +        + F++N    +G +    R  K L       +++T N ++ G+    +  
Sbjct: 230 SAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIG 289

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           VA   F  MV   G   KP+VVT++++ID  CK+G +DKA  L   M    + P++I Y+
Sbjct: 290 VADDYFN-MVVRIGP--KPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYS 346

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            LI G       ++ + L +  +D G++ DVV F++ ++   K G + +V ++ + M+  
Sbjct: 347 ILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNE 406

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G++P+ V+ + L+ GFC  GRI  A  LFV ++  G    + +Y+ LI   CK   + D 
Sbjct: 407 GISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDG 466

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             LY +M+ +R  P  I Y+ L++GL + G +GDAL+   +     + P+ FT  T +D 
Sbjct: 467 FYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDS 526

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C+   ++ A++V+  +     +    TY  LI G  + GR+  A  LF ++  K   PD
Sbjct: 527 FCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPD 586

Query: 504 VVTCSTMIHWLCK-----------------------------------EGQMDKANDLLL 528
           V+T  T+I  LCK                                   EG ++ A  L +
Sbjct: 587 VITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFV 646

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            +  +   P   TF T++  +    +    V L  KM +E+L  + ++ +  ++D   ++
Sbjct: 647 HVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTI-LIDAFCRE 705

Query: 589 KKYRECLNQFRHLL 602
            +  + +  F  +L
Sbjct: 706 GRMDDAMLMFSKML 719



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 235/498 (47%), Gaps = 55/498 (11%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNV--FACDPNVV--TFNTLINGLCRTRNTL 203
           T ++V + FLI   C +G   ++  +F  + V      PNVV     +LI+  C      
Sbjct: 164 TNHSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHC------ 217

Query: 204 VALKLFEEMVNEFGAICKP---------------------------------------DV 224
                 E +V+++G +C                                         D+
Sbjct: 218 -----VEVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDI 272

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           +T N I+ G+     +  A +    +      PNV+T+++LI  +C   +  +A  LF  
Sbjct: 273 ITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDV 332

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M  NGV PD++ ++ +I+   K G+++   RLL + + +G+  D V ++S MD +  +G 
Sbjct: 333 MAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGD 392

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           + R  +++  M+++G   +V S +ILI   C++ ++ +A  L+ ++L     PS++TY+ 
Sbjct: 393 LGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSA 452

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L++G  + GNL D   L + M      PD+  ++  I+GLCK G V +A++ F    N  
Sbjct: 453 LIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRG 512

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + T N L++  C++  +  A K+++ +       D VT + +I    + G++D+A 
Sbjct: 513 LSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEAL 572

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            L   M  K+  P  +T+CTL+ G  +  KKS   + +     +  V  D+++ + ++++
Sbjct: 573 MLFFQMLKKDFKPDVITYCTLIDGLCK-LKKSSAGLCIFDFMCKNAVAPDIAIYNVLINM 631

Query: 585 LSKDKKYRECLNQFRHLL 602
            S++      L  F H++
Sbjct: 632 HSREGHLEAALGLFVHVV 649



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 126/246 (51%), Gaps = 4/246 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S+  +  FD M K   +P +  + +L+ M ++    +  + LF  +   G  PD+F  N 
Sbjct: 603 SSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNT 662

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I C C       A  +  ++      PN +TF  LI+  C EGR+ +A  +F K+    
Sbjct: 663 MICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEG 722

Query: 182 CDPNVVTFNTLINGLCRTRNTL-VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            +PN+VT++ LI+G  ++++ +   LKL+ EM+    A   P++V+Y+ +IDGLCK G +
Sbjct: 723 PEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIA---PNIVSYSILIDGLCKRGLM 779

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +A        D+++ P+VI Y  LI G+C V    EA  L+  M+ N + PD      +
Sbjct: 780 KEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839

Query: 301 INYNCK 306
             Y  K
Sbjct: 840 EEYQLK 845


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic; AltName: Full=Protein PROTON GRADIENT
            REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 172/569 (30%), Positives = 273/569 (47%), Gaps = 52/569 (9%)

Query: 46   SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
            S+AK   DR         EA   F  +  +   P   ++ +++   +K  + D  + L  
Sbjct: 477  SLAKAGRDR---------EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 527

Query: 106  RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
             +  NG  PD+ V+N LIN L K      A+ +  R+      P  VT+N L+ GL   G
Sbjct: 528  EMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 587

Query: 166  RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
            +I EA  LF+ +    C PN +TFNTL + LC+     +ALK+  +M++     C PDV 
Sbjct: 588  KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD---MGCVPDVF 644

Query: 226  TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG----------------- 268
            TYN+II GL K+G V +A     QMK + + P+ +T  +L+ G                 
Sbjct: 645  TYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703

Query: 269  -FCCVDD-----WKE--AKCLFIEMMDNGVQ-PDVVTFNAM-----------INYNCKDG 308
             + C D      W++     L    +DN V   + +  N +           I Y+CK  
Sbjct: 704  LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHN 763

Query: 309  KMDKVNRLLELMIQR-GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             +     L E   +  GV P   TYN L+ G      I  A+++F+ + S GC  DV +Y
Sbjct: 764  NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATY 823

Query: 368  NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI-DKMQ 426
            N L++A  K  K+++   LY+EM +     + IT+N ++SGL + GN+ DAL L  D M 
Sbjct: 824  NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883

Query: 427  LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              D  P + T+   IDGL K+G + EA Q+F+ + +  C      YN LING  K G   
Sbjct: 884  DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943

Query: 487  TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
             AC LF R+  +G  PD+ T S ++  LC  G++D+      +++     P  V +  ++
Sbjct: 944  AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003

Query: 547  RGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
             G  ++++  + +VL ++M   + +  DL
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDL 1032



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 249/499 (49%), Gaps = 39/499 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  MI     P + +++ L+  L K +  D+V+ L K + + GL P+++   + I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L + G  + A+ +L R+      P+ VT+  LI+ LC   ++  A  +F+K+      
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++     R+ L ++K F   + + G +  PDVVT+  ++D LCK G   +A
Sbjct: 326 PDRVTYITLLDRFSDNRD-LDSVKQFWSEMEKDGHV--PDVVTFTILVDALCKAGNFGEA 382

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            + L  M+D+ I PN+ TYN+LICG   V    +A  LF  M   GV+P   T+   I+Y
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442

Query: 304 NCKDGKMDKVNRLLELMIQRGVNP-----------------------------------D 328
             K G         E M  +G+ P                                   D
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           +VTYN +M  +  VG I  A +L   M+  GC  DV   N LIN   K  +V++A  ++ 
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M   +++P+V+TYNTLL+GL + G + +A++L + M      P++ TF T  D LCKN 
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            V  A+++   + +  C   + TYN +I GL K G++K A   FH+++ K   PD VT  
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLC 681

Query: 509 TMIHWLCKEGQMDKANDLL 527
           T++  + K   ++ A  ++
Sbjct: 682 TLLPGVVKASLIEDAYKII 700



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 173/621 (27%), Positives = 276/621 (44%), Gaps = 57/621 (9%)

Query: 4   KSSHRSFSL---ASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNI 60
           KSS  S S+   +SK     +   + G    P TD S  +FK   S+A  LN  H +   
Sbjct: 65  KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFK---SVAGNLNLVHTTETC 121

Query: 61  TS-----------NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
                         E  Y FD M K        ++  +   L+            +++  
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G   + +  N LI+ L K    + A  V  R++   F P+  T++ L+ GL     I  
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
              L K++      PNV TF   I  L R      A ++ + M +E    C PDVVTY  
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG---CGPDVVTYTV 298

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +ID LC    +D AKE+  +MK     P+ +TY +L+  F    D    K  + EM  +G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             PDVVTF  +++  CK G   +    L++M  +G+ P+  TYN+L+ G   V R+  A 
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV---------- 399
           ELF +M S G +   Y+Y + I+   K      A+  + +M ++ I P++          
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478

Query: 400 -------------------------ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
                                    +TYN ++    +VG + +A+KL+ +M  N   PD 
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
               + I+ L K   V EA ++F  ++  K +  + TYN L+ GL K G+++ A +LF  
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  KG  P+ +T +T+   LCK  ++  A  +L  M    CVP   T+ T++ G V+N +
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658

Query: 555 KSKVVVLLHKMAAEKLVVSDL 575
             + +   H+M  +KLV  D 
Sbjct: 659 VKEAMCFFHQM--KKLVYPDF 677



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 146/572 (25%), Positives = 256/572 (44%), Gaps = 77/572 (13%)

Query: 47   IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR 106
            +   +N  +K+  +  +EA   F  M +MK  P + ++  LL  L KN +    + LF+ 
Sbjct: 541  VNSLINTLYKADRV--DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598

Query: 107  LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
            +   G  P+    N L +CLCK    + A  +L +++     P+  T+N +I GL   G+
Sbjct: 599  MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658

Query: 167  IMEAARLFKKL-------------------------------------------NVFACD 183
            + EA   F ++                                           N+F  D
Sbjct: 659  VKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWED 718

Query: 184  -----------PNVVTFNT--LINGLCRTRNTLV---------------ALKLFEEMVNE 215
                        N V+F+   + NG+CR  ++++               A  LFE+   +
Sbjct: 719  LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778

Query: 216  FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
             G   +P + TYN +I GL +   ++ A+++ LQ+K     P+V TYN L+  +      
Sbjct: 779  LGV--QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836

Query: 276  KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD-KVNRLLELMIQRGVNPDTVTYNS 334
             E   L+ EM  +  + + +T N +I+   K G +D  ++   +LM  R  +P   TY  
Sbjct: 837  DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896

Query: 335  LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
            L+DG    GR+  A++LF  M+  GCR +   YNILIN   K  + + A  L++ M+ E 
Sbjct: 897  LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956

Query: 395  IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
            +RP + TY+ L+  L  VG + + L    +++ + + PD   +   I+GL K+  + EA+
Sbjct: 957  VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016

Query: 455  QVFQAIRNCK-CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             +F  ++  +     + TYN LI  L   G ++ A K+++ +Q  G  P+V T + +I  
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076

Query: 514  LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
                G+ + A  +   M      P+  T+  L
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 189/384 (49%), Gaps = 7/384 (1%)

Query: 98   DTVVSLFKRLNSNGLFPDL-FVLNLLINCLCKMGITSGAFVVLGRILRSC-FTPNTVTFN 155
            D  VS  +RL +NG+  D   +L  +I   CK    SGA  +  +  +     P   T+N
Sbjct: 730  DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN 789

Query: 156  FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
             LI GL     I  A  +F ++    C P+V T+N L++   ++       +L++EM   
Sbjct: 790  LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849

Query: 216  FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ-MKDRNINPNVITYNSLICGFCCVDD 274
                C+ + +T+N +I GL K G VD A +L    M DR+ +P   TY  LI G      
Sbjct: 850  E---CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906

Query: 275  WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
              EAK LF  M+D G +P+   +N +IN   K G+ D    L + M++ GV PD  TY+ 
Sbjct: 907  LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966

Query: 335  LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
            L+D  C+VGR+      F  +   G   DV  YN++IN   K  ++E+A+ L+ EM + R
Sbjct: 967  LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026

Query: 395  -IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             I P + TYN+L+  L   G + +A K+ +++Q   + P+ FTF   I G   +G    A
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086

Query: 454  VQVFQAIRNCKCELRIETYNCLIN 477
              V+Q +          TY  L N
Sbjct: 1087 YAVYQTMVTGGFSPNTGTYEQLPN 1110



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 159/611 (26%), Positives = 261/611 (42%), Gaps = 86/611 (14%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           ++G I  NEA      M      P + ++T+L+  L   ++ D    +F+++ +    PD
Sbjct: 270 RAGKI--NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 L++                 + +    P+ VTF  L++ LC  G   EA     
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      PN+ T+NTLI GL R      AL+LF  M    G   KP   TY   ID   
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM-ESLGV--KPTAYTYIVFIDYYG 444

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G    A E   +MK + I PN++  N+ +         +EAK +F  + D G+ PD V
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N M+    K G++D+  +LL  M++ G  PD +  NSL++      R+  A ++F+ M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
                +  V +YN L+    K+ K+++A+ L+  M+ +   P+ IT+NTL   L +   +
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN------------- 462
             ALK++ KM     VPD FT+ T I GL KNG V EA+  F  ++              
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 684

Query: 463 ---CKCEL-----RIET---YNC--------------------------------LINGL 479
               K  L     +I T   YNC                                + NG+
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744

Query: 480 CKMGR------LKTACK---------LFHRLQHK-GPIPDVVTCSTMIHWLCKEGQMDKA 523
           C+ G       ++ +CK         LF +     G  P + T + +I  L +   ++ A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK---------LVVSD 574
            D+ L +++  C+P   T+  LL  + ++ K  ++  L  +M+  +         +V+S 
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864

Query: 575 LSLSSKVVDLL 585
           L  +  V D L
Sbjct: 865 LVKAGNVDDAL 875



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 3/247 (1%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            K+GN+     +Y+ D M     SP   ++  L+  L+K+ +      LF+ +   G  P+
Sbjct: 867  KAGNVDDALDLYY-DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
              + N+LIN   K G    A  +  R+++    P+  T++ L++ LC  GR+ E    FK
Sbjct: 926  CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +L     +P+VV +N +INGL ++     AL LF EM    G    PD+ TYNS+I  L 
Sbjct: 986  ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG--ITPDLYTYNSLILNLG 1043

Query: 236  KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
              G V++A ++  +++   + PNV T+N+LI G+      + A  ++  M+  G  P+  
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103

Query: 296  TFNAMIN 302
            T+  + N
Sbjct: 1104 TYEQLPN 1110


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/453 (32%), Positives = 247/453 (54%), Gaps = 41/453 (9%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGL--FPDLFVLNLLINCLCKMGITS 133
           P P +  F  +LT +AK + YD V++L+KR+ N+ G+   PDL+  N+L+NC C+     
Sbjct: 6   PLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCR----- 60

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
                       CF P++         L   G++M+             +P++VT ++L+
Sbjct: 61  ------------CFQPSS--------ALSYLGKMMK----------LGIEPDIVTASSLV 90

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           NG C + +   A+ +  +M  + G   K DVV    +ID LCK+  V  A E+L +MKDR
Sbjct: 91  NGFCLSNSIKDAVYVAGQM-EKMG--IKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDR 147

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I+PNV+TY+SLI G C      +A+    EM    + P+V+TF+A+I+   K GK+ KV
Sbjct: 148 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 207

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           + + ++MIQ  ++P+  TY+SL+ G C+  R+  A ++   M+SKGC  +V +Y+ L N 
Sbjct: 208 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 267

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             K  +V+D + L  +M    +  + ++ NTL+ G FQ G +  AL +   M  N ++P+
Sbjct: 268 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPN 327

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             ++   + GL  NG V +A+  F+ ++  + +L I TY  +I+G+CK   +K A  LF+
Sbjct: 328 IRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFY 387

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           +L+ K   PD    + MI  L + G   +A+ L
Sbjct: 388 KLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 420



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 189/391 (48%), Gaps = 38/391 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ +   M+K+   P + + + L+     +      V +  ++   G+  D+ V  +L
Sbjct: 65  SSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTIL 124

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK  +   A  VL R+     +PN VT++ LI GLC  GR+ +A R   +++    
Sbjct: 125 IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 184

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +PNV+TF+ LI+   + R  L  +    +M+ +      P+V TY+S+I GLC    VD+
Sbjct: 185 NPNVITFSALIDAYAK-RGKLSKVDSVYKMMIQMS--IDPNVFTYSSLIYGLCMHNRVDE 241

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++L  M  +   PNV+TY++L  GF     +K ++      +D+G+            
Sbjct: 242 AIKMLDLMISKGCTPNVVTYSTLANGF-----FKSSR------VDDGI------------ 278

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                       +LL+ M QRGV  +TV+ N+L+ G+   G+I  A  +F  M S G   
Sbjct: 279 ------------KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP 326

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++ SYNI++     + +VE A+  +  M   R    +ITY  ++ G+ +   + +A  L 
Sbjct: 327 NIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLF 386

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            K++   V PD   +   I  L + G   EA
Sbjct: 387 YKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 417



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 175/353 (49%), Gaps = 14/353 (3%)

Query: 257 PNVITYNSLICGFC-------CVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDG 308
           P+++ +N ++            ++ WK      IE  +   + PD+ T N ++N  C+  
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKR-----IENAEGIEISPDLYTCNILVNCFCRCF 62

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +       L  M++ G+ PD VT +SL++GFCL   I  A  +   M   G + DV    
Sbjct: 63  QPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDT 122

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           ILI+  CK++ V  A+ + + M    I P+V+TY++L++GL + G L DA + + +M   
Sbjct: 123 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 182

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            + P+  TF+  ID   K G + +   V++ +     +  + TY+ LI GLC   R+  A
Sbjct: 183 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA 242

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            K+   +  KG  P+VVT ST+ +   K  ++D    LL DM  +    + V+  TL++G
Sbjct: 243 IKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKG 302

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + Q  K    + +   M +  L+ +  S +  +  L + + +  + L++F H+
Sbjct: 303 YFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFA-NGEVEKALSRFEHM 354



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 163/347 (46%), Gaps = 3/347 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN---INPNVITYNSLICGFCCVDDWKEA 278
           P +V +N ++  + K    D    L  ++++     I+P++ T N L+  FC       A
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
                +MM  G++PD+VT ++++N  C    +     +   M + G+  D V    L+D 
Sbjct: 68  LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C    +  A E+   M  +G   +V +Y+ LI   CK  ++ DA     EM S++I P+
Sbjct: 128 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 187

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           VIT++ L+    + G L     +   M    + P+ FT+++ I GLC +  V EA+++  
Sbjct: 188 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 247

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            + +  C   + TY+ L NG  K  R+    KL   +  +G   + V+C+T+I    + G
Sbjct: 248 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 307

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           ++D A  +   M +   +P+  ++  +L G   N +  K +     M
Sbjct: 308 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 354


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 157/489 (32%), Positives = 250/489 (51%), Gaps = 43/489 (8%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+ P +   N +++  CK G+   A  +L ++     +PN VT+N L+NGL   G + +A
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQA 256

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L + +     + +V T++ LI G C       A +L EEM++  GA+  P VVTYN+I
Sbjct: 257 KELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSR-GAV--PTVVTYNTI 313

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           + GLCK G V  A++LL  M ++N+ P++++YN+LI G+  + +  EA  LF E+    +
Sbjct: 314 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL 373

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P VVT+N +I+  C+ G +D   RL + MI+ G +PD  T+ + + GFC +G +  A+E
Sbjct: 374 APSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKE 433

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF  M+++G + D ++Y   I    K      A  +  EML+    P +ITYN  + GL 
Sbjct: 434 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 493

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF------------- 457
           ++GNL +A +L+ KM  N +VPD  T+ + I      G + +A  +F             
Sbjct: 494 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVV 553

Query: 458 --------QAIRNCKCELRIE---------------TYNCLINGLCKMGRLKTACKLFHR 494
                    A+R  + +L I                TYN LINGLCK+ ++  A   F  
Sbjct: 554 TYTVLIHSYAVRG-RLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAE 612

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +Q KG  P+  T + +I+  C  G   +A  L  DM  +   P   T  +LL+     NK
Sbjct: 613 MQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL---NK 669

Query: 555 KSKVVVLLH 563
             K+ V+ H
Sbjct: 670 DYKLHVVRH 678



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 233/439 (53%), Gaps = 39/439 (8%)

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  N  VA +++  MV E G IC P VVTYN+++D  CK G V +A +LL QM+    +P
Sbjct: 179 RDNNIDVAREVYNVMV-ECG-IC-PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSP 235

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N +TYN L+ G     + ++AK L  +M+  G++  V T++ +I   C+ G++++ +RL 
Sbjct: 236 NDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLG 295

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M+ RG  P  VTYN++M G C  GR+S AR+L   MV+K    D+ SYN LI    + 
Sbjct: 296 EEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRL 355

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             + +A  L+ E+    + PSV+TYNTL+ GL ++G+L  A++L D+M  +   PD FTF
Sbjct: 356 GNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTF 415

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRN-------------CKCELRIE-------------- 470
            T++ G CK G +  A ++F  + N                EL++               
Sbjct: 416 TTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 475

Query: 471 --------TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                   TYN  I+GL K+G LK A +L  ++ + G +PD VT +++IH     G + K
Sbjct: 476 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRK 535

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A  L L+M +K   PS VT+  L+  +    +    ++   +M  EK V  ++   + ++
Sbjct: 536 ARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEM-HEKGVHPNVITYNALI 594

Query: 583 DLLSKDKKYRECLNQFRHL 601
           + L K +K  +  N F  +
Sbjct: 595 NGLCKVRKMDQAYNFFAEM 613



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 137/296 (46%), Gaps = 41/296 (13%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+   D MIK  P P + +FT  +    K         LF  + + GL PD F     I 
Sbjct: 396 AMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIV 455

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFAC 182
              K+G  S AF +   +L   F P+ +T+N  I+GL   G + EA+ L KK+  N    
Sbjct: 456 GELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVP 515

Query: 183 D---------------------------------PNVVTFNTLINGLC-RTRNTLVALKL 208
           D                                 P+VVT+  LI+    R R  L  L  
Sbjct: 516 DHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHF 575

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           FE  ++E G    P+V+TYN++I+GLCK   +D+A     +M+ + I+PN  TY  LI  
Sbjct: 576 FE--MHEKG--VHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINE 631

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
            C +  W+EA  L+ +M+D  +QPD  T  +++ +  KD K+  V R LE +I  G
Sbjct: 632 NCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVV-RHLENVIAAG 686



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 182/398 (45%), Gaps = 59/398 (14%)

Query: 178 NVFACDPNVVTFNTLINGLCRTRN-TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           N F     V     L+  L   RN  +VAL+ F     + G   K   ++Y+ I+D L +
Sbjct: 36  NKFLFHAAVAEPKLLVRVLNTVRNRPVVALRFFRWAERQTG--FKRSEISYSVILDILAR 93

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +G +  A                         +C ++     K      M+NGV  DVV+
Sbjct: 94  NGLMRSA-------------------------YCVMEKVVSVK------MENGVI-DVVS 121

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
                     +  M  V  +L+L++   V        SL++   LV         F  MV
Sbjct: 122 --------SSEVSMPSVKLILDLLLWIYVK------KSLLEKCLLV---------FYKMV 158

Query: 357 SKGCRHDVYSYN-ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           SKG   DV + N +L     +D  ++ A  +Y  M+   I P+V+TYNT+L    + G +
Sbjct: 159 SKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMV 218

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +AL+L+ +MQ     P+  T+   ++GL  +G + +A ++ Q +     E+ + TY+ L
Sbjct: 219 QEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPL 278

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I G C+ G+++ A +L   +  +G +P VVT +T+++ LCK G++  A  LL  M  KN 
Sbjct: 279 IRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNL 338

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           +P  V++ TL+ G+ +     +  +L  ++    L  S
Sbjct: 339 MPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPS 376


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 252/491 (51%), Gaps = 4/491 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M+     P + +++ L+  L K +  +TV+ L + + S GL P+++   + I
Sbjct: 210 EALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICI 269

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L + G    A+ +L R+  +   P+ VT+  LI+ LC  G++  A  LF K+   +  
Sbjct: 270 RILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHK 329

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++        L A+K F   +   G +  PDVVT+  +ID LCK G VD+A
Sbjct: 330 PDRVTYITLLDKFS-DHGDLDAIKEFWSEMEADGYL--PDVVTFTILIDALCKVGKVDEA 386

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
              L  MK + + PN+ TYN+LICG   ++   EA  LF  M   G++    T+   I+Y
Sbjct: 387 FGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDY 446

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G+  K  +  E M   G+ P+ V  N+ +      GR+  A+E F  +   G   D
Sbjct: 447 YGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPD 506

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YNIL+    K  +V+DA+ L  EM      P V+  N+L+  L++   + +A K+  
Sbjct: 507 AITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQ 566

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+   + P   T+ T + GL K G V EA  +F+ +    C     ++N L++ LCK G
Sbjct: 567 RMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNG 626

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A K+  R+      PDV+T +T+I+ L KE +++ A  L   M+ K   P  VT C
Sbjct: 627 EVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLC 685

Query: 544 TLLRGFVQNNK 554
           TLL G +++ +
Sbjct: 686 TLLPGVIKDGR 696



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 163/540 (30%), Positives = 260/540 (48%), Gaps = 41/540 (7%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
             EA  FF+ + K   +P   ++ IL+    K  + D  + L   +  NG  P++ ++N L
Sbjct: 489  EEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSL 548

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I+ L K      A+ +  R+      P  VT+N L+ GL  EGR+ EA  LFK +    C
Sbjct: 549  IDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDC 608

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             PN ++FNTL++ LC+     +ALK+   M       C PDV+TYN++I GL K+  V+ 
Sbjct: 609  PPNTISFNTLLDCLCKNGEVDLALKMLFRMTE---MNCFPDVLTYNTVIYGLIKENRVNY 665

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFC----CVDDWKEAK------------------- 279
            A  L  QMK + I P+ +T  +L+ G        D ++ AK                   
Sbjct: 666  AFWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLM 724

Query: 280  ------------CLFIE-MMDNGVQPDVVTFNAMINYNCKDGK-MDKVNRLLELMIQRGV 325
                         LF E ++ N +  D      ++ + CK GK +D  N  L+L     +
Sbjct: 725  GGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCI 784

Query: 326  NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             P    YNSL+DG         A  LF  M + GC  DV++YN+ ++A  K  K+++   
Sbjct: 785  TPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFD 844

Query: 386  LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
            LY EML    +P+ IT+N ++ GL +  +L  A+ L   +   D  P  +T+   IDGL 
Sbjct: 845  LYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLL 904

Query: 446  KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
            K G + EA Q F+ + +  C      YN L+NG  K G ++TAC+LF R+  +G  PD+ 
Sbjct: 905  KLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLK 964

Query: 506  TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            + S M+  LC  G++D A     +++     P  V +  ++ G  ++ +  + + L  +M
Sbjct: 965  SYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 241/498 (48%), Gaps = 45/498 (9%)

Query: 117 FVLNL-----LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
           FVLN      LI+ L K G    A  V  R++     P+  T++ L+  L     I    
Sbjct: 188 FVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVM 247

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
            L +++      PN+ TF   I  L R      A  + + M +   A C PDVVTY  +I
Sbjct: 248 GLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDD---AGCGPDVVTYTVLI 304

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           D LC  G ++ AKEL L+MK  +  P+ +TY +L+  F    D    K  + EM  +G  
Sbjct: 305 DALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYL 364

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PDVVTF  +I+  CK GK+D+    L++M ++GV P+  TYN+L+ G   + R+  A EL
Sbjct: 365 PDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALEL 424

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM------------------LSE 393
           F SM S G     Y+Y + I+   K  +   A+  + +M                  L+E
Sbjct: 425 FNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAE 484

Query: 394 RIR-----------------PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           + R                 P  ITYN L+    + G + DA+KL+ +M+ N   P+   
Sbjct: 485 QGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVI 544

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
             + ID L K   V EA ++FQ ++  K    + TYN L+ GL K GR++ A  LF  + 
Sbjct: 545 INSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMI 604

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
                P+ ++ +T++  LCK G++D A  +L  M   NC P  +T+ T++ G ++ N+ +
Sbjct: 605 ADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVN 664

Query: 557 KVVVLLHKMAAEKLVVSD 574
               L H+M  +K++  D
Sbjct: 665 YAFWLFHQM--KKVIYPD 680



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 160/554 (28%), Positives = 253/554 (45%), Gaps = 74/554 (13%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +EA   F  M +MK +P + ++  LL  L K  +     +LFK + ++   P+    N L
Sbjct: 559  DEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTL 618

Query: 123  INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            ++CLCK G    A  +L R+   +CF P+ +T+N +I GL  E R+  A  LF ++    
Sbjct: 619  LDCLCKNGEVDLALKMLFRMTEMNCF-PDVLTYNTVIYGLIKENRVNYAFWLFHQMKK-V 676

Query: 182  CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG------------------------ 217
              P+ VT  TL+ G+ +      A ++ +E V+  G                        
Sbjct: 677  IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQS 736

Query: 218  ----------AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLI 266
                       IC+ D V    ++  LCK G    A  + L++ K   I P++  YNSLI
Sbjct: 737  ILFAESLVCNTICEDDSVLI-PLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLI 795

Query: 267  CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
             G       + A  LF +M + G  PDV T+N  ++   K GK+ ++  L E M+ RG  
Sbjct: 796  DGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCK 855

Query: 327  PDTVTYN-----------------------------------SLMDGFCLVGRISRAREL 351
            P+T+T+N                                    L+DG   +GR+  A++ 
Sbjct: 856  PNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQF 915

Query: 352  FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
            F  M+  GC  +   YNIL+N   K   VE A  L+R M+ E IRP + +Y+ ++  L  
Sbjct: 916  FEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCM 975

Query: 412  VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            VG + DAL   ++++L+ + PD   +   I+GL ++  V EA+ +F  +RN      + T
Sbjct: 976  VGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYT 1035

Query: 472  YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
            YN LI  L   G ++ A K++  LQ KG  P+V T + +I      G  D+A  +   M 
Sbjct: 1036 YNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMM 1095

Query: 532  AKNCVPSEVTFCTL 545
               C P+  TF  L
Sbjct: 1096 VGGCRPNTGTFAQL 1109



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 257/542 (47%), Gaps = 7/542 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    D M K   +P + ++  L+  L +  + D  + LF  + S GL    +   L 
Sbjct: 384 DEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILF 443

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K G +  A     ++  +   PN V  N  +  L  +GR+ EA   F  L     
Sbjct: 444 IDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGL 503

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ +T+N L+    +      A+KL  EM  E G  C P+VV  NS+ID L K   VD+
Sbjct: 504 APDAITYNILMRCYGKAGRVDDAIKLLSEM-EENG--CDPEVVIINSLIDTLYKADRVDE 560

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++  +MK+  + P V+TYN+L+ G       +EA  LF  M+ +   P+ ++FN +++
Sbjct: 561 AWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLD 620

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+G++D   ++L  M +    PD +TYN+++ G     R++ A  LF  M  K    
Sbjct: 621 CLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYP 679

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT-YNTLLSGLFQVGNLGDALKL 421
           D  +   L+    KD ++EDA  + +E +      +  + +  L+ G+     +G ++  
Sbjct: 680 DYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILF 739

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC-ELRIETYNCLINGLC 480
            + +  N +  D       +  LCK+G  ++A  VF  +    C    +E YN LI+GL 
Sbjct: 740 AESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLL 799

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K    + A  LF+++++ G  PDV T +  +  L K G++ +  DL  +M  + C P+ +
Sbjct: 800 KARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTI 859

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRH 600
           T   ++ G V++N   K + L + + +     +  +    ++D L K  +  E    F  
Sbjct: 860 THNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGP-LIDGLLKLGRLEEAKQFFEE 918

Query: 601 LL 602
           +L
Sbjct: 919 ML 920



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 155/554 (27%), Positives = 254/554 (45%), Gaps = 9/554 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           F++   KSG   S +A+  F+ M      P + +    L  LA+  + +     F  L  
Sbjct: 443 FIDYYGKSGE--SGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKK 500

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            GL PD    N+L+ C  K G    A  +L  +  +   P  V  N LI+ L    R+ E
Sbjct: 501 CGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDE 560

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A ++F+++      P VVT+NTL+ GL +      A  LF+ M+ +    C P+ +++N+
Sbjct: 561 AWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIAD---DCPPNTISFNT 617

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ++D LCK+G VD A ++L +M + N  P+V+TYN++I G    +    A  LF   M   
Sbjct: 618 LLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLF-HQMKKV 676

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLL-ELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           + PD VT   ++    KDG+++   R+  E +   G + D   +  LM G  +   I ++
Sbjct: 677 IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQS 736

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVITYNTLLS 407
                S+V      D      L+   CK  K  DA  ++ ++     I PS+  YN+L+ 
Sbjct: 737 ILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLID 796

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GL +      A  L  KM+     PD FT+  ++D L K+G + E   +++ +    C+ 
Sbjct: 797 GLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKP 856

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
              T+N +I GL K   L  A  L++ L      P   T   +I  L K G++++A    
Sbjct: 857 NTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFF 916

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            +M    C+P+   +  L+ GF +         L  +M  E  +  DL   S +VD L  
Sbjct: 917 EEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEG-IRPDLKSYSIMVDCLCM 975

Query: 588 DKKYRECLNQFRHL 601
             K  + L+ F  L
Sbjct: 976 VGKVDDALHYFEEL 989



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 251/539 (46%), Gaps = 10/539 (1%)

Query: 70  DCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           +  +KMK S   P   ++  LL   + +   D +   +  + ++G  PD+    +LI+ L
Sbjct: 318 ELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDAL 377

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           CK+G    AF  L  + +    PN  T+N LI GL    R+ EA  LF  +     +   
Sbjct: 378 CKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTA 437

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
            T+   I+   ++  +  A+K FE+M    G +  P++V  N+ +  L + G +++AKE 
Sbjct: 438 YTYILFIDYYGKSGESGKAIKTFEKMKTN-GIV--PNIVACNASLYSLAEQGRLEEAKEF 494

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
              +K   + P+ ITYN L+  +       +A  L  EM +NG  P+VV  N++I+   K
Sbjct: 495 FNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYK 554

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
             ++D+  ++ + M +  + P  VTYN+L+ G    GR+  A  LF  M++  C  +  S
Sbjct: 555 ADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTIS 614

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           +N L++  CK+ +V+ A+ +   M      P V+TYNT++ GL +   +  A  L  +M+
Sbjct: 615 FNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK 674

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-IRNCKCELRIETYNCLINGLCKMGRL 485
              + PD  T  T + G+ K+G + +A +V +  + +         +  L+ G+     +
Sbjct: 675 -KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEI 733

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFCT 544
             +      L       D      ++ +LCK G+   A ++ L +    C+ PS   + +
Sbjct: 734 GQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNS 793

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
           L+ G ++         L +KM        D+   +  +D L K  K +E  + +  +LF
Sbjct: 794 LIDGLLKARLTEMAWGLFYKMKNAG-CTPDVFTYNLFLDALGKSGKIKELFDLYEEMLF 851



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 191/370 (51%), Gaps = 6/370 (1%)

Query: 110  NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS-CFTPNTVTFNFLINGLCAEGRIM 168
            N +  D  VL  L+  LCK G    A+ V  ++ +S C TP+   +N LI+GL  + R+ 
Sbjct: 746  NTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLL-KARLT 804

Query: 169  EAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            E A  LF K+    C P+V T+N  ++ L ++        L+EEM+      CKP+ +T+
Sbjct: 805  EMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRG---CKPNTITH 861

Query: 228  NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
            N +I GL K   +DKA +L   +   + +P   TY  LI G   +   +EAK  F EM+D
Sbjct: 862  NIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLD 921

Query: 288  NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
             G  P+   +N ++N   K G ++    L   M++ G+ PD  +Y+ ++D  C+VG++  
Sbjct: 922  YGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDD 981

Query: 348  ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
            A   F  +   G   D+  YN++IN   + Q+VE+A+ L+ EM +  I P + TYN L+ 
Sbjct: 982  ALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALIL 1041

Query: 408  GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
             L   G + +A K+ +++QL  + P+ FT+   I G   +G    A  V++ +    C  
Sbjct: 1042 NLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRP 1101

Query: 468  RIETYNCLIN 477
               T+  L N
Sbjct: 1102 NTGTFAQLPN 1111



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/422 (21%), Positives = 170/422 (40%), Gaps = 71/422 (16%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+ + I  ++ TY ++          +EA     +M   G   +  ++  +I+   K G 
Sbjct: 148 MQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGF 207

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGF------------------------------ 339
             +  ++   M+  G+ P   TY++LM                                 
Sbjct: 208 CREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTI 267

Query: 340 CL-----VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           C+      G+I  A  +   M   GC  DV +Y +LI+A C   K+ +A  L+ +M +  
Sbjct: 268 CIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASS 327

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
            +P  +TY TLL      G+L    +   +M+ +  +PD  TF   ID LCK G V EA 
Sbjct: 328 HKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAF 387

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL----------------------- 491
                ++       + TYN LI GL ++ RL  A +L                       
Sbjct: 388 GTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYY 447

Query: 492 ------------FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
                       F +++  G +P++V C+  ++ L ++G++++A +    ++     P  
Sbjct: 448 GKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDA 507

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
           +T+  L+R + +  +    + LL +M  E     ++ + + ++D L K  +  E    F+
Sbjct: 508 ITYNILMRCYGKAGRVDDAIKLLSEM-EENGCDPEVVIINSLIDTLYKADRVDEAWKMFQ 566

Query: 600 HL 601
            +
Sbjct: 567 RM 568



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 4/241 (1%)

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           N + + +I+R +N    TY ++     + G +  A      M   G   + YSY  LI+ 
Sbjct: 146 NLMQKQIIKRSIN----TYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHL 201

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             K     +A+ +YR M+SE I+PS+ TY+ L+  L +  ++   + L+ +M+   + P+
Sbjct: 202 LLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPN 261

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            +TF   I  L + G + EA  + + + +  C   + TY  LI+ LC  G+L  A +LF 
Sbjct: 262 IYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFL 321

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           +++     PD VT  T++      G +D   +   +MEA   +P  VTF  L+    +  
Sbjct: 322 KMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVG 381

Query: 554 K 554
           K
Sbjct: 382 K 382



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 102/206 (49%)

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
           H   + N ++      ++VED V ++  M  + I+ S+ TY T+   L+  G L +A   
Sbjct: 120 HTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVA 179

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ++KM+    V + +++   I  L K+GF  EA++V++ + +   +  ++TY+ L+  L K
Sbjct: 180 LEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGK 239

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              ++T   L   ++  G  P++ T +  I  L + G++D+A  +L  M+   C P  VT
Sbjct: 240 RRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVT 299

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +  L+       K +    L  KM A
Sbjct: 300 YTVLIDALCNAGKLNNAKELFLKMKA 325



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 5/181 (2%)

Query: 50   FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
             +N   K G++ +  A   F  M+K    P + S++I++  L    + D  +  F+ L  
Sbjct: 934  LMNGFGKQGDVET--ACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL 991

Query: 110  NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            +GL PDL   NL+IN L +      A  +   +     TP+  T+N LI  L   G + E
Sbjct: 992  SGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEE 1051

Query: 170  AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
            A +++++L +   +PNV T+N LI G   + N   A  ++++M+   G  C+P+  T+  
Sbjct: 1052 AGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMM--VGG-CRPNTGTFAQ 1108

Query: 230  I 230
            +
Sbjct: 1109 L 1109



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            ++A+++F+ +      P +  + +++  L ++++ +  +SLF  + + G+ PDL+  N L
Sbjct: 980  DDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNAL 1039

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I  L   G+   A  +   +      PN  T+N LI G    G    A  ++KK+ V  C
Sbjct: 1040 ILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGC 1099

Query: 183  DPNVVTFNTLIN 194
             PN  TF  L N
Sbjct: 1100 RPNTGTFAQLPN 1111


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 163/535 (30%), Positives = 259/535 (48%), Gaps = 43/535 (8%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+  L +++ ++   S ++++     F +   L+ L+ C  +M  T  AF VL  +L+  
Sbjct: 78  LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F  N    N L+ GLC      +A  L +++   +  P+V ++NT+I G C  +    AL
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +L  EM    G+ C   +VT+  +ID  CK G +D+A   L +MK   +  +++ Y SLI
Sbjct: 198 ELANEMK---GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            GFC   +    K LF E+++ G  P  +T+N +I   CK G++ + + + E MI+RGV 
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P+  TY  L+DG C VG+   A +    M+ K    +  +YNI+IN  CKD  V DAV +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND---VVPDSFTFATYIDG 443
              M   R RP  ITYN LL GL   G+L +A KL+  + L D     PD  ++   I G
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL-YLMLKDSSYTDPDVISYNALIHG 433

Query: 444 LCKN-----------------------------------GFVLEAVQVFQAIRNCKCELR 468
           LCK                                    G V +A+++++ I + K    
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
            +TY  +I+G CK G L  A  L  +++     P V   + ++  LCKEG +D+A  L  
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           +M+  N  P  V+F  ++ G ++         LL  M+   L   DL   SK+++
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL-SPDLFTYSKLIN 607



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 151/496 (30%), Positives = 246/496 (49%), Gaps = 5/496 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+K   +  + +  ILL  L +N +    VSL + +  N L PD+F  N +I   C+   
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   +  S  + + VT+  LI+  C  G++ EA    K++     + ++V + +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI G C          LF+E++    + C    +TYN++I G CK G + +A E+   M 
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPC---AITYNTLIRGFCKLGQLKEASEIFEFMI 309

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           +R + PNV TY  LI G C V   KEA      M++   +P+ VT+N +IN  CKDG + 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV--SKGCRHDVYSYNI 369
               ++ELM +R   PD +TYN L+ G C  G +  A +L   M+  S     DV SYN 
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+  CK+ ++  A+ +Y  ++ +      +T N LL+   + G++  A++L  ++  + 
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           +V +S T+   IDG CK G +  A  +   +R  + +  +  YNCL++ LCK G L  A 
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           +LF  +Q     PDVV+ + MI    K G +  A  LL+ M      P   T+  L+  F
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609

Query: 550 VQNNKKSKVVVLLHKM 565
           ++     + +    KM
Sbjct: 610 LKLGYLDEAISFFDKM 625



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 236/471 (50%), Gaps = 5/471 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           S  + ++ IL+    K  + D  +   K +   GL  DL V   LI   C  G       
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   +L    +P  +T+N LI G C  G++ EA+ +F+ +      PNV T+  LI+GLC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
               T  AL+    M+ +     +P+ VTYN II+ LCKDG V  A E++  MK R   P
Sbjct: 329 GVGKTKEALQPLNLMIEKDE---EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 258 NVITYNSLICGFCCVDDWKEA-KCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNR 315
           + ITYN L+ G C   D  EA K L++ + D+    PDV+++NA+I+  CK+ ++ +   
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           + +L++++    D VT N L++     G +++A EL+  +       +  +Y  +I+  C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K   +  A  L  +M    ++PSV  YN LLS L + G+L  A +L ++MQ ++  PD  
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           +F   IDG  K G +  A  +   +        + TY+ LIN   K+G L  A   F ++
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
              G  PD   C +++ +   +G+ DK  +L+  +  K+ V  +   CT++
Sbjct: 626 VDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVM 676



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 194/384 (50%), Gaps = 5/384 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F+ MI+    P + ++T L+  L    +    +     +      P+    N++I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIII 359

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFA 181
           N LCK G+ + A  ++  + +    P+ +T+N L+ GLCA+G + EA++L   +  +   
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            DP+V+++N LI+GLC+      AL +++ +V + GA    D VT N +++   K G V+
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA---GDRVTTNILLNSTLKAGDVN 476

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA EL  Q+ D  I  N  TY ++I GFC       AK L  +M  + +QP V  +N ++
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK+G +D+  RL E M +    PD V++N ++DG    G I  A  L V M   G  
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+++Y+ LIN   K   +++A+  + +M+     P     +++L      G      +L
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTEL 656

Query: 422 IDKMQLNDVVPDSFTFATYIDGLC 445
           + K+   D+V D     T +D +C
Sbjct: 657 VKKLVDKDIVLDKELTCTVMDYMC 680


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 232/473 (49%), Gaps = 6/473 (1%)

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           +S F  + S+G+ PD+   N ++  L           V   +L+    P+ VT+N L++ 
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 161 LCAEGRIMEAARLFKKLNV--FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
              EGR  + A L K++      C PN VT N +I GL R  +    L+   EMV     
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGD----LEEAAEMVEGMRL 302

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
             K    TYN +I GL   GFV KA +L L+M++  I P V+TYN++I G       + A
Sbjct: 303 SKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAA 362

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           +  F+EM   G+QPDV+T+N+++N  CK G + +   L   +   G+ P  +TYN L+DG
Sbjct: 363 QVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDG 422

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C +G +  AR L   MV +GC  DV +Y IL+  +     +  A   + EMLS+ ++P 
Sbjct: 423 YCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPD 482

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              YNT +     +G +  A +L + M L  +  D+ T+   IDGLCK G + +A  +  
Sbjct: 483 CFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQM 542

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            + +   +    TY CLI+  C+ G L+ A K F  +   G  P  VT +  IH  C+ G
Sbjct: 543 KMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRG 602

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +  A      M  +   P+E+T+  L+    +  +        H+M    LV
Sbjct: 603 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLV 655



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 154/541 (28%), Positives = 264/541 (48%), Gaps = 17/541 (3%)

Query: 35  DLSSH----HFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTM 90
           +++SH      KD   + + L+D  +  +I +  A      M+++   P + ++  LL  
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAE-----MLQLGIEPSIVTYNTLLDS 246

Query: 91  LAKNKQYDTVVSLFKRLNS--NGLFPDLFVLNLLINCLCKMG-ITSGAFVVLGRILRSCF 147
             K  + D V  L K + +  +G  P+    N++I  L + G +   A +V G  +R   
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEG--MRLSK 304

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
             ++ T+N LI GL A+G + +A  L  ++      P VVT+N +I+GL ++     A  
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQV 364

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
            F EM    G   +PDV+TYNS+++G CK G + +A  L   ++   + P V+TYN LI 
Sbjct: 365 KFVEM-RAMG--LQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILID 421

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G+C + D +EA+ L  EM++ G  PDV T+  ++  +     +       + M+ +G+ P
Sbjct: 422 GYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQP 481

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D   YN+ +     +G I++A  L   M+ +G   D  +YNILI+  CK   + DA  L 
Sbjct: 482 DCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQ 541

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            +M+   ++P  ITY  L+    + G L +A K    M  + + P + T+  +I   C+ 
Sbjct: 542 MKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRR 601

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G +  A   F+ +     E    TYN LI+ LC+ GR + A + FH +  +G +P+  T 
Sbjct: 602 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTY 661

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + +I   CKEG  + A     +M      P  +T   L +GF + +    +  L + +  
Sbjct: 662 TLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHMNHAIEYLENAVLG 721

Query: 568 E 568
           E
Sbjct: 722 E 722



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 201/400 (50%), Gaps = 14/400 (3%)

Query: 183 DPNVVTFNTLINGLCRT-RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           +P++VT+NTL++   +  RN  VA+ L +EM    G+ C P+ VT+N +I GL + G ++
Sbjct: 234 EPSIVTYNTLLDSFLKEGRNDKVAM-LLKEMETR-GSGCLPNDVTHNVVITGLARKGDLE 291

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A E++  M+  +   +  TYN LI G       K+A  L +EM + G+ P VVT+NAMI
Sbjct: 292 EAAEMVEGMR-LSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMI 350

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   + G+++        M   G+ PD +TYNSL++G+C  G +  A  LF  +   G  
Sbjct: 351 HGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLA 410

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             V +YNILI+  C+   +E+A  L  EM+ +   P V TY  L+ G     +L  A + 
Sbjct: 411 PTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREF 470

Query: 422 IDKMQLNDVVPDSFTFATYID-----GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            D+M    + PD F + T I      G     F L  V + + I +        TYN LI
Sbjct: 471 FDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTV-----TYNILI 525

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +GLCK G L  A  L  ++ H G  PD +T + +IH  C+ G + +A     DM +    
Sbjct: 526 DGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLA 585

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           PS VT+   +  + +            KM  E +  ++++
Sbjct: 586 PSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 625


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 160/517 (30%), Positives = 257/517 (49%), Gaps = 24/517 (4%)

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           T++     +N Q +    LF ++   G+FP +   N L++ LCK G       +L ++L+
Sbjct: 186 TVISGFYEENYQVEAY-ELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLK 244

Query: 145 SCFTPNTVTFNFLINGLCAEG-------RIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   PN  TFN  I GLC +G       +++EA     K+     +P+  T+NT+I G  
Sbjct: 245 NGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYS 304

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +      A ++ ++   +F     PD  TY S+I G+C+DG +D A  L  +   + + P
Sbjct: 305 KVGKIQDASRILKDA--KFKGFV-PDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKP 361

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +++ YN+LI G        +A  L  +M   G+ PD+ T+N +IN  CK G +   N LL
Sbjct: 362 SIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLL 421

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
              I +G  PD  T+N+L+DG+C   ++  A  +  SM S G   DV +YN ++N  CK 
Sbjct: 422 NAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKA 481

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            K ED +  ++ ++ +   P++ITYN L+  L +   + +AL L+++++   ++PD  +F
Sbjct: 482 AKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSF 541

Query: 438 ATYIDGLCKNGFVLEAVQVF----QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            T I G C NG + EA Q+F    Q  R C     + TYN +IN   +   +  A KLFH
Sbjct: 542 GTVISGFCNNGDLDEAYQLFRRMEQQYRICHT---VATYNIMINAFSEKLDMDMAQKLFH 598

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +  KG  PD  T   MI   CK G ++   D LL       VPS  TF  ++      +
Sbjct: 599 EMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQH 658

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           +  + V ++H M    +V         VV +   DKK
Sbjct: 659 RVHEAVGIVHLMVRTGVV------PEAVVTIFDADKK 689



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 247/503 (49%), Gaps = 10/503 (1%)

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
            +  +    V +F+R++     P +F  N ++N L + G  + A  V  R+      P+ 
Sbjct: 87  GRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDV 146

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            TF   I   C   R + A RL   +    C+ N V + T+I+G       + A +LF +
Sbjct: 147 CTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNK 206

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC- 270
           M+   G    P + T+N ++  LCK G + + ++LL ++    + PN+ T+N  I G C 
Sbjct: 207 ML-RLGIF--PHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCR 263

Query: 271 ------CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
                       EA+    +M++ G++PD  T+N +I    K GK+   +R+L+    +G
Sbjct: 264 KGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKG 323

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD  TY SL+ G C  G I  A  LF   + KG +  +  YN LI    +   V  A+
Sbjct: 324 FVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKAL 383

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L  +M  E + P + TYN +++GL ++G + DA  L++       +PD FTF T IDG 
Sbjct: 384 QLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGY 443

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           CK   +  A+ +  ++ +      + TYN ++NGLCK  + +   + F  +  KG +P++
Sbjct: 444 CKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNI 503

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +T + +I  LCK  ++ +A DLL ++  +  +P  V+F T++ GF  N    +   L  +
Sbjct: 504 ITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRR 563

Query: 565 MAAEKLVVSDLSLSSKVVDLLSK 587
           M  +  +   ++  + +++  S+
Sbjct: 564 MEQQYRICHTVATYNIMINAFSE 586



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 250/512 (48%), Gaps = 11/512 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EAV  F+ M      P + S+  ++ +L +   ++    ++ R+   G+ PD+    + 
Sbjct: 93  QEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIR 152

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+      A  +L  +       N V +  +I+G   E   +EA  LF K+     
Sbjct: 153 IKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGI 212

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD- 241
            P++ TFN L++ LC+  +     KL  +++     +C P++ T+N  I GLC+ G ++ 
Sbjct: 213 FPHIATFNKLMHILCKKGHLQEGEKLLNKVLKN--GVC-PNLFTFNIFIQGLCRKGVLEG 269

Query: 242 ------KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
                 +A+  L +M ++ + P+  TYN++I G+  V   ++A  +  +    G  PD  
Sbjct: 270 ANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEF 329

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+ ++I   C+DG +D    L E  + +G+ P  V YN+L+ G    G + +A +L   M
Sbjct: 330 TYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDM 389

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +G   D+++YN++IN  CK   V DA  L    +++   P + T+NTL+ G  +   +
Sbjct: 390 SKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKM 449

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A+ ++D M  + V PD  T+ + ++GLCK     + ++ F+ I    C   I TYN L
Sbjct: 450 DNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNIL 509

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I  LCK  ++  A  L   ++++G IPD V+  T+I   C  G +D+A  L   ME +  
Sbjct: 510 IESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYR 569

Query: 536 VPSEV-TFCTLLRGFVQNNKKSKVVVLLHKMA 566
           +   V T+  ++  F +         L H+M 
Sbjct: 570 ICHTVATYNIMINAFSEKLDMDMAQKLFHEMG 601



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 179/347 (51%), Gaps = 6/347 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           + G+I  + A+  F+  +     P +  +  L+  L++       + L   ++  G+ PD
Sbjct: 340 QDGDI--DHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPD 397

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  NL+IN LCKMG  S A  +L   +   + P+  TFN LI+G C   ++  A  +  
Sbjct: 398 IWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILD 457

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      P+V+T+N+++NGLC+       ++ F +M+ E G  C P+++TYN +I+ LC
Sbjct: 458 SMWSHGVTPDVITYNSILNGLCKAAKPEDVMETF-KMIMEKG--CLPNIITYNILIESLC 514

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDV 294
           K   V +A +LL ++++R + P+ +++ ++I GFC   D  EA  LF  M     +   V
Sbjct: 515 KARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTV 574

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            T+N MIN   +   MD   +L   M  +G +PD+ TY  ++DGFC VG ++   +  + 
Sbjct: 575 ATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLK 634

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            +  G    + ++  +IN  C   +V +AV +   M+   + P  + 
Sbjct: 635 EIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 189/380 (49%), Gaps = 12/380 (3%)

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
           ++ L AL +F  +  E G   K   +TY  +I+ L   G  D  + +L++M+  N++ ++
Sbjct: 18  KDPLKALSIFNSVKKEDG--FKHTFLTYKRMIEKLGFHGEFDAMERVLMEMR-LNVDNSL 74

Query: 260 I--TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +   Y S +  +      +EA  +F  M     +P + ++NA++N   + G  ++ +++ 
Sbjct: 75  LEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVY 134

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M   G+ PD  T+   +  FC   R   A  L  +M S+GC  +   Y  +I+   ++
Sbjct: 135 LRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEE 194

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
               +A  L+ +ML   I P + T+N L+  L + G+L +  KL++K+  N V P+ FTF
Sbjct: 195 NYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTF 254

Query: 438 ATYIDGLCKNGF-------VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
             +I GLC+ G        V+EA      + N   E    TYN +I G  K+G+++ A +
Sbjct: 255 NIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASR 314

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           +    + KG +PD  T  ++I  +C++G +D A  L  +   K   PS V + TL++G  
Sbjct: 315 ILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLS 374

Query: 551 QNNKKSKVVVLLHKMAAEKL 570
           Q     K + L++ M+ E +
Sbjct: 375 QQGLVLKALQLMNDMSKEGM 394


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 267/535 (49%), Gaps = 26/535 (4%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS-------------LFKRLNSN 110
           EA    + ++++ P P   +    L  +     Y+TV++                R+ ++
Sbjct: 48  EASARLNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAH 107

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
              P       L+  LC    T  A  +L  +  S   P+ VT+  LI GLC    + +A
Sbjct: 108 ETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKA 167

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L +++     +PNVV ++ L+ G C+        K+FEEM    G   +PDVV Y  +
Sbjct: 168 VELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEM---SGRGIEPDVVMYTGL 224

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ID LC++G V KA +++ +M +R + PNV+TYN LI   C     KEA  L   M++ GV
Sbjct: 225 IDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGV 284

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMI--QRGVNPDTVTYNSLMDGFCLVGRISRA 348
             D VT+N +I       +MD+   LLE MI  +  V P+ VT+NS++ G C  GR+ +A
Sbjct: 285 ALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQA 344

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            ++   M   GC  ++ ++N+LI    +  KV+ A+ L  EM S  + P   TY+ L++G
Sbjct: 345 FQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILING 404

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCEL 467
             ++  +  A  L+ KM+ + + P+   +   +  LC+ G + +A   F  + +NCK  L
Sbjct: 405 FCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCK--L 462

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            +  Y+ +I+G C++   K+A +    +  +G IPD VT S +I+     G +  A  +L
Sbjct: 463 DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVL 522

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
             M A   VP    F +L++G+       KV+ L+ +M A+     D++L SK++
Sbjct: 523 KQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAK-----DIALDSKII 572



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 231/458 (50%), Gaps = 9/458 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV     M +    P +  ++ LL    K  +++ V  +F+ ++  G+ PD+ +   L
Sbjct: 165 DKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGL 224

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC+ G    A  V+ +++     PN VT+N LIN +C EG + EA  L   +     
Sbjct: 225 IDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGV 284

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + VT+NTLI GL        A+ L EEM++    + +P+VVT+NS+I GLCK G + +
Sbjct: 285 ALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH-GETMVEPNVVTFNSVIHGLCKTGRMRQ 343

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++   M +     N++T+N LI G   V   K+A  L  EM  +G++PD  T++ +IN
Sbjct: 344 AFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILIN 403

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK  ++D+   LL  M + G+ P+ V Y  L+   C  G + +AR  F  M  K C+ 
Sbjct: 404 GFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKL 462

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV +Y+ +I+  C+ +  + A    + ML E + P  +TY+ L++     G+LG A +++
Sbjct: 463 DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVL 522

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNG---FVLEAVQVFQAIRNCKCELRI--ETYNCLIN 477
            +M  +  VPD   F + I G    G    VLE ++   A ++   + +I    Y CL+ 
Sbjct: 523 KQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTA-KDIALDSKIISTIYTCLVA 581

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
                  L++    F     KG +      + M+H LC
Sbjct: 582 NNEGKALLQSVPG-FDTEVSKGAVISSHELTNMLHKLC 618



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 111/223 (49%)

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  SYN ++ A C+     DA      +++   RP+ ++Y TL+  L      G A+ L
Sbjct: 76  RDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +  MQ + V PD  T+ T I GLC    V +AV++ + +     E  +  Y+CL+ G CK
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            GR +   K+F  +  +G  PDVV  + +I  LC+EG++ KA  ++  M  +   P+ VT
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           +  L+    +     + + L + M  + + +  ++ ++ +  L
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 158/496 (31%), Positives = 252/496 (50%), Gaps = 20/496 (4%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S + +  F  M +   +P +     +L +L    ++D + +++  +   G+ P +F  N 
Sbjct: 175 STQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNT 234

Query: 122 LINCLCKMGITSGAFVVLGRI---LRSCFTPNTVTFNFLINGLCAEGRIMEAA------R 172
           L++  CK G    A  +L  +      C  PN VT+N +INGL  +G + +AA      R
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEARAAGCL-PNDVTYNVVINGLARKGELEKAAQLVDIMR 293

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           L KK + F       T+N LI GL        A  L  EM NE G +  P VVTYN++ID
Sbjct: 294 LSKKASAF-------TYNPLITGLLARDFVEKAGALLLEMENE-GIV--PTVVTYNTLID 343

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           GL K G  + A+    +M+ + + P++ITYNSLI G+C   + K+A CLF ++   G+ P
Sbjct: 344 GLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGP 403

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
            V+T+N +I+  C+ G ++   RL E M +    PD  TY  LM+G C+V  ++  R  F
Sbjct: 404 TVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFF 463

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M+SKG   D ++YN  I+A      + +A  L  EM+   I    +TYN L+ GL + 
Sbjct: 464 DEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKT 523

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G+L DA  L  KM  + +  D  T+   I   C+ G ++EA  +F  +        + TY
Sbjct: 524 GSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTY 583

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
              I+  C+ G L  A   F ++  +G  P+ VT + ++H LC+ G+ + A     +M  
Sbjct: 584 TIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLE 643

Query: 533 KNCVPSEVTFCTLLRG 548
           +  VP++ T+  L+ G
Sbjct: 644 RGLVPNKYTYTLLIDG 659



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 236/473 (49%), Gaps = 6/473 (1%)

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           +S F+ +  +G+ P +   N ++  L           V   +L+    P+  T+N L++ 
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238

Query: 161 LCAEGRIMEAARLFKKLNVFA--CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
            C  GR+ +A  L K +   A  C PN VT+N +INGL R       L+   ++V+    
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGE----LEKAAQLVDIMRL 294

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
             K    TYN +I GL    FV+KA  LLL+M++  I P V+TYN+LI G     + + A
Sbjct: 295 SKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAA 354

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           +  F EM   G+ PD++T+N++IN  CK G + +   L   + + G+ P  +TYN L+DG
Sbjct: 355 QVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDG 414

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C +G +  AR L   M  + C  DV +Y IL+N +C  + +      + EMLS+ + P 
Sbjct: 415 YCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPD 474

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              YNT +S    +G + +A +L ++M L  +  D+ T+   IDGLCK G + +A  ++ 
Sbjct: 475 CFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWM 534

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +      L   TY CLI+  C+ GRL  A  +F  +   G  P VVT +  IH  C+ G
Sbjct: 535 KMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRG 594

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +  A      M  +   P+EVT+  L+    +  +        H+M    LV
Sbjct: 595 NLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLV 647



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 152/492 (30%), Positives = 249/492 (50%), Gaps = 6/492 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN--GLFPDLFVLNLLINCLCKM 129
           M+++   P + ++  LL    K  + D  V+L K + +   G  P+    N++IN L + 
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARK 279

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G    A   L  I+R     +  T+N LI GL A   + +A  L  ++      P VVT+
Sbjct: 280 GELEKA-AQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTY 338

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           NTLI+GL +T N   A   F+EM  + G +  PD++TYNS+I+G CK G + +A  L   
Sbjct: 339 NTLIDGLFKTGNAEAAQVKFDEMRAK-GLL--PDLITYNSLINGYCKAGNLKQALCLFGD 395

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           +K   + P V+TYN LI G+C + D + A+ L  EM +    PDV T+  ++N +C    
Sbjct: 396 LKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRN 455

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +  V    + M+ +G+ PD   YN+ +     +G I+ A +L   M+ +G   D  +YN+
Sbjct: 456 LAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNV 515

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+  CK   ++DA  L+ +M+++ +R   +TY  L+    + G L +A  + D M  + 
Sbjct: 516 LIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASG 575

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P   T+  +I   C+ G +  A   F+ +     E    TYN L++ LC+MGR ++A 
Sbjct: 576 LSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAY 635

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           + FH +  +G +P+  T + +I   CKEG    A  L  +M  K   P   T   L +GF
Sbjct: 636 QHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695

Query: 550 VQNNKKSKVVVL 561
            + +    V  L
Sbjct: 696 GEGHMYDAVQYL 707



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 99/220 (45%), Gaps = 13/220 (5%)

Query: 372 NANCKDQKVEDAVC------LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +A C+ QK   A C       ++EM    + P V   N +L  L       D   +   M
Sbjct: 161 SAECQAQKSVPASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDM 220

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI--RNCKCELRIETYNCLINGLCKMG 483
               V P  FT+ T +D  CK G + +AV + + +  R   C     TYN +INGL + G
Sbjct: 221 LQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKG 280

Query: 484 RLKTACKL--FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            L+ A +L    RL  K       T + +I  L     ++KA  LLL+ME +  VP+ VT
Sbjct: 281 ELEKAAQLVDIMRLSKKA---SAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVT 337

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           + TL+ G  +        V   +M A+ L+   ++ +S +
Sbjct: 338 YNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLI 377



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   FD M+    SP + ++TI +    +          F+++   G+ P+    N+L+
Sbjct: 563 EAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLM 622

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC+MG T  A+     +L     PN  T+  LI+G C EG  + A RL+ +++     
Sbjct: 623 HALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIH 682

Query: 184 PNVVTFNTLINGL 196
           P+  T N L  G 
Sbjct: 683 PDHCTHNALFKGF 695


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 261/506 (51%), Gaps = 10/506 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           ++ Y    M K   +P + ++  +L    K  ++   + L   + S G+  D+   N+LI
Sbjct: 251 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 310

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC+    +  +++L  + +    PN VT+N LING   EG+++ A++L  ++  F   
Sbjct: 311 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 370

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VTFN LI+G     N   ALK+F  M  +      P  V+Y  ++DGLCK+   D A
Sbjct: 371 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKG---LTPSEVSYGVLLDGLCKNAEFDLA 427

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +   ++MK   +    ITY  +I G C      EA  L  EM  +G+ PD+VT++A+IN 
Sbjct: 428 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+      ++  + + G++P+ + Y++L+   C +G +  A  ++ +M+ +G   D
Sbjct: 488 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK--- 420
            +++N+L+ + CK  KV +A    R M S+ I P+ ++++ L++G    GN G+ LK   
Sbjct: 548 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING---YGNSGEGLKAFS 604

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           + D+M      P  FT+ + + GLCK G + EA +  +++      +    YN L+  +C
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 664

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK-NCVPSE 539
           K G L  A  LF  +  +  +PD  T +++I  LC++G+   A     + EA+ N +P++
Sbjct: 665 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 724

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKM 565
           V +   + G  +  +    +    +M
Sbjct: 725 VMYTCFVDGMFKAGQWKAGIYFREQM 750



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 263/525 (50%), Gaps = 3/525 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F   M+K K  P + +F IL+ +L     ++    L +++  +G  P +   N +++  C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    A  +L  +       +  T+N LI+ LC   RI +   L + +      PN V
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+NTLING       L+A +L  EM++ FG    P+ VT+N++IDG   +G   +A ++ 
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLS-FG--LSPNHVTFNALIDGHISEGNFKEALKMF 396

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M+ + + P+ ++Y  L+ G C   ++  A+  ++ M  NGV    +T+  MI+  CK+
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D+   LL  M + G++PD VTY++L++GFC VGR   A+E+   +   G   +   Y
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           + LI   C+   +++A+ +Y  M+ E       T+N L++ L + G + +A + +  M  
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + ++P++ +F   I+G   +G  L+A  VF  +          TY  L+ GLCK G L+ 
Sbjct: 577 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 636

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A K    L       D V  +T++  +CK G + KA  L  +M  ++ +P   T+ +L+ 
Sbjct: 637 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 696

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           G  +  K    ++   +  A   V+ +  + +  VD + K  +++
Sbjct: 697 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 741



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 246/541 (45%), Gaps = 38/541 (7%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + IL+ +  +       + +F+ +   G  P ++  N ++  + K G     +  L  +L
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           +    P+  TFN LIN LCAEG   +++ L +K+      P +VT+NT+++  C+     
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A++L + M ++       DV TYN +I  LC+   + K   LL  M+ R I+PN +TYN
Sbjct: 286 AAIELLDHMKSKG---VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI GF        A  L  EM+  G+ P+ VTFNA+I+ +  +G   +  ++  +M  +
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P  V+Y  L+DG C       AR  ++ M   G      +Y  +I+  CK+  +++A
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGN----------------------------- 414
           V L  EM  + I P ++TY+ L++G  +VG                              
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522

Query: 415 ------LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
                 L +A+++ + M L     D FTF   +  LCK G V EA +  + + +      
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 582

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
             +++CLING    G    A  +F  +   G  P   T  +++  LCK G + +A   L 
Sbjct: 583 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 642

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            + A       V + TLL    ++   +K V L  +M    ++    + +S +  L  K 
Sbjct: 643 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702

Query: 589 K 589
           K
Sbjct: 703 K 703



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 160/603 (26%), Positives = 278/603 (46%), Gaps = 56/603 (9%)

Query: 6   SHRSFSLA------SKAGYRCNFWCSFGRPPNPKTDLSSHH-------FKDGTSIAKFLN 52
           SHR+ +++      SK G     W S G     K D S+ H       F    SI   L 
Sbjct: 9   SHRNGAISLLQLSFSKFGCFSRVWFSSGAVKTSKRDDSASHQAFGVSGFDMEKSIYNILT 68

Query: 53  -DRHKSGN-----------ITSNEAVYFFDCMIKMKPSPGMTS------FTILLTMLAKN 94
            DR  S N           +    A+ F   ++K    PG+ +        I   +L + 
Sbjct: 69  IDRWGSLNHMDYRQARLRLVHGKLALKFLKWVVK---QPGLETDHIVQLVCITTHILVRA 125

Query: 95  KQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTF 154
           + YD    + K L+                     G +S  F  L    R C   N   +
Sbjct: 126 RMYDPARHILKELS------------------LMSGKSSFVFGALMTTYRLC-NSNPSVY 166

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           + LI     EG I ++  +F+ + ++  +P+V T N ++  + ++   +      +EM+ 
Sbjct: 167 DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLK 226

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
               IC PDV T+N +I+ LC +G  +K+  L+ +M+     P ++TYN+++  +C    
Sbjct: 227 R--KIC-PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           +K A  L   M   GV  DV T+N +I+  C+  ++ K   LL  M +R ++P+ VTYN+
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++GF   G++  A +L   M+S G   +  ++N LI+ +  +   ++A+ ++  M ++ 
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           + PS ++Y  LL GL +      A     +M+ N V     T+   IDGLCKNGF+ EAV
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +   +     +  I TY+ LING CK+GR KTA ++  R+   G  P+ +  ST+I+  
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C+ G + +A  +   M  +       TF  L+    +  K ++    +  M ++ ++ + 
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583

Query: 575 LSL 577
           +S 
Sbjct: 584 VSF 586



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 147/575 (25%), Positives = 257/575 (44%), Gaps = 21/575 (3%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKS-GNITSNEAVYFFDCMIKMKPSP 79
           N   SFG  PN  T                L D H S GN    EA+  F  M     +P
Sbjct: 362 NEMLSFGLSPNHVT-------------FNALIDGHISEGNF--KEALKMFYMMEAKGLTP 406

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
              S+ +LL  L KN ++D     + R+  NG+         +I+ LCK G    A V+L
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             + +    P+ VT++ LING C  GR   A  +  ++      PN + ++TLI   CR 
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 526

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A++++E M+ E       D  T+N ++  LCK G V +A+E +  M    I PN 
Sbjct: 527 GCLKEAIRIYEAMILEGHT---RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           ++++ LI G+    +  +A  +F EM   G  P   T+ +++   CK G + +  + L+ 
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           +       DTV YN+L+   C  G +++A  LF  MV +    D Y+Y  LI+  C+  K
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703

Query: 380 VEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
              A+   +E  +   + P+ + Y   + G+F+ G     +   ++M      PD  T  
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             IDG  + G + +   +   + N      + TYN L++G  K   + T+  L+  +   
Sbjct: 764 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 823

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +TC +++  +C+   ++    +L     +       TF  L+     N + +  
Sbjct: 824 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 883

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             L+  M +  + + D      +V +L+++ +++E
Sbjct: 884 FDLVKVMTSLGISL-DKDTCDAMVSVLNRNHRFQE 917



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 137/553 (24%), Positives = 247/553 (44%), Gaps = 39/553 (7%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +EAV   + M K    P + +++ L+    K  ++ T   +  R+   GL P+  + + L
Sbjct: 460  DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I   C+MG    A  +   ++    T +  TFN L+  LC  G++ EA    + +     
Sbjct: 520  IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             PN V+F+ LING   +   L A  +F+EM  + G    P   TY S++ GLCK G + +
Sbjct: 580  LPNTVSFDCLINGYGNSGEGLKAFSVFDEMT-KVGH--HPTFFTYGSLLKGLCKGGHLRE 636

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            A++ L  +       + + YN+L+   C   +  +A  LF EM+   + PD  T+ ++I+
Sbjct: 637  AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 696

Query: 303  YNCKDGK------------------------------MDKVNR------LLELMIQRGVN 326
              C+ GK                              M K  +        E M   G  
Sbjct: 697  GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 756

Query: 327  PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            PD VT N+++DG+  +G+I +  +L   M ++    ++ +YNIL++   K + V  +  L
Sbjct: 757  PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 816

Query: 387  YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            YR ++   I P  +T ++L+ G+ +   L   LK++       V  D +TF   I   C 
Sbjct: 817  YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 876

Query: 447  NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            NG +  A  + + + +    L  +T + +++ L +  R + +  + H +  +G  P+   
Sbjct: 877  NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 936

Query: 507  CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
               +I+ LC+ G +  A  +  +M A    P  V    ++R   +  K  +  +LL  M 
Sbjct: 937  YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 996

Query: 567  AEKLVVSDLSLSS 579
              KLV +  S ++
Sbjct: 997  KMKLVPTIASFTT 1009



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 247/544 (45%), Gaps = 54/544 (9%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            +A   FD M K+   P   ++  LL  L K           K L++     D  + N L+
Sbjct: 601  KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-C 182
              +CK G  + A  + G +++    P++ T+  LI+GLC +G+ + A    K+       
Sbjct: 661  TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             PN V +   ++G+ +       +  F E ++  G    PD+VT N++IDG  + G ++K
Sbjct: 721  LPNKVMYTCFVDGMFKAGQWKAGI-YFREQMDNLGHT--PDIVTTNAMIDGYSRMGKIEK 777

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              +LL +M ++N  PN+ TYN L+ G+    D   +  L+  ++ NG+ PD +T ++++ 
Sbjct: 778  TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 837

Query: 303  YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR- 361
              C+   ++   ++L+  I RGV  D  T+N L+   C  G I+ A +L   M S G   
Sbjct: 838  GICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL 897

Query: 362  -------------------------HDVYSYNI---------LINANCKDQKVEDAVCLY 387
                                     H++    I         LIN  C+   ++ A  + 
Sbjct: 898  DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 957

Query: 388  REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             EM++ +I P  +  + ++  L + G   +A  L+  M    +VP   +F T +   CKN
Sbjct: 958  EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 1017

Query: 448  GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
            G V+EA+++   + NC  +L + +YN LI GLC  G +  A +L+  ++  G + +  T 
Sbjct: 1018 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1077

Query: 508  STMIH-WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              +I   L +E     A+ +L D+              L RGF+ +   S+      KMA
Sbjct: 1078 KALIRGLLARETAFSGADIILKDL--------------LARGFITSMSLSQDSHRNLKMA 1123

Query: 567  AEKL 570
             EKL
Sbjct: 1124 MEKL 1127



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 142/566 (25%), Positives = 247/566 (43%), Gaps = 43/566 (7%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            EA+  ++ MI    +    +F +L+T L K  +        + + S+G+ P+    + LI
Sbjct: 531  EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
            N     G    AF V   + +    P   T+  L+ GLC  G + EA +  K L+     
Sbjct: 591  NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 650

Query: 184  PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
             + V +NTL+  +C++ N   A+ LF EMV        PD  TY S+I GLC+ G    A
Sbjct: 651  VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS---ILPDSYTYTSLISGLCRKGKTVIA 707

Query: 244  KELLLQMKDR-NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMI 301
                 + + R N+ PN + Y   + G      WK A   F E MDN G  PD+VT NAMI
Sbjct: 708  ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK-AGIYFREQMDNLGHTPDIVTTNAMI 766

Query: 302  NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-- 359
            +   + GK++K N LL  M  +   P+  TYN L+ G+     +S +  L+ S++  G  
Sbjct: 767  DGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 826

Query: 360  ------------------------------CRH---DVYSYNILINANCKDQKVEDAVCL 386
                                          CR    D Y++N+LI+  C + ++  A  L
Sbjct: 827  PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 886

Query: 387  YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             + M S  I     T + ++S L +     ++  ++ +M    + P+S  +   I+GLC+
Sbjct: 887  VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 946

Query: 447  NGFVLEAVQVFQAIRNCK-CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
             G +  A  V + +   K C   +   + ++  L K G+   A  L   +     +P + 
Sbjct: 947  VGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 1005

Query: 506  TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            + +T++H  CK G + +A +L + M         V++  L+ G       +    L  +M
Sbjct: 1006 SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065

Query: 566  AAEKLVVSDLSLSSKVVDLLSKDKKY 591
              +  + +  +  + +  LL+++  +
Sbjct: 1066 KGDGFLANATTYKALIRGLLARETAF 1091



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 52/115 (45%)

Query: 62   SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            ++EA      M+KMK  P + SFT L+ +  KN      + L   +++ GL  DL   N+
Sbjct: 985  ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1044

Query: 122  LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            LI  LC  G  + AF +   +    F  N  T+  LI GL A       A +  K
Sbjct: 1045 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1099


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 244/477 (51%), Gaps = 28/477 (5%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +F +    L +  + D  ++L + +  +G  PD  +   +I+ LC  G  + A  +
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +L      +  TF+ ++ G+C  GR+ EAARL  ++    C P V+T+  L+ GLCR
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 199 TR--------------------NTLVALKLFEEMVNEFGAI--------CKPDVVTYNSI 230
            R                    NT++   L E  + E   +        C+PD  TY+ +
Sbjct: 277 VRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 336

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           + GLCK G +  A  LL +M+ +   PNV+TY  ++  FC    W + + L  EM   G+
Sbjct: 337 MHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 396

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
             +   +N MI   CKDG+MD+   L++ M  +G NPD  +YN+++   C   ++  A  
Sbjct: 397 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 456

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +F +++ +G   +  +YN +I+A  +D + +DAV L +EM+       V++YN L+  + 
Sbjct: 457 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 516

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + GN+  +L L+++M    + P++ ++   I  LCK   V +A+++ + + N      I 
Sbjct: 517 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 576

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           TYN LINGLCKMG +  A  L  +L ++   PD++T + +I W CK   +D A  LL
Sbjct: 577 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 633



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 237/468 (50%), Gaps = 8/468 (1%)

Query: 102 SLFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           +L++R+ + + + P  F   +    LC++G    A  +L  + R    P+ V +  +I+ 
Sbjct: 144 ALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHA 203

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
           LC +G + EAA L  ++ +  C  +V TF+ ++ G+C       A +L + M+ +    C
Sbjct: 204 LCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG---C 260

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            P V+TY  ++ GLC+    D+A+ +L ++ + N    V+ +N++I G        EA  
Sbjct: 261 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN----VVLFNTVIGGCLAEGKLAEATE 316

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L+  M   G QPD  T++ +++  CK G++    RLL  M ++G  P+ VTY  ++  FC
Sbjct: 317 LYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC 376

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G     R L   M +KG   +   YN +I A CKD ++++A+ L +EM S+   P + 
Sbjct: 377 KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 436

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YNT++  L     + +A  + + +    VV +  T+ T I  L ++G   +AV++ + +
Sbjct: 437 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 496

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
               C L + +YN LI  +CK G +  +  L   +  KG  P+ V+ + +I  LCKE ++
Sbjct: 497 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRV 556

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
             A +L   M  +   P  VT+ TL+ G  +       + LL K+  E
Sbjct: 557 RDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 604



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 210/419 (50%), Gaps = 8/419 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P   TF      LCR      AL L   M       C PD V Y ++I  LC  G V +A
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHG---CVPDAVLYQTVIHALCDQGGVTEA 213

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL +M       +V T++ ++ G C +   +EA  L   MM  G  P V+T+  ++  
Sbjct: 214 ATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQG 273

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+  + D+       M+ R    + V +N+++ G    G+++ A EL+ +M  KGC+ D
Sbjct: 274 LCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPD 329

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            ++Y+IL++  CK  ++  AV L REM  +   P+V+TY  +L    + G   D   L++
Sbjct: 330 AHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLE 389

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M    +  +S  +   I  LCK+G + EA+ + Q +R+  C   I +YN +I  LC   
Sbjct: 390 EMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 449

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +++ A  +F  L  +G + + +T +T+IH L ++G+   A  L  +M    C    V++ 
Sbjct: 450 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 509

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            L++   ++    + +VLL +MA + +  +++S +  ++  L K+++ R+ L   + +L
Sbjct: 510 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNI-LISELCKERRVRDALELSKQML 567



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 170/323 (52%), Gaps = 3/323 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   ++ M      P   +++IL+  L K  +  + V L + +   G  P++    +++
Sbjct: 313 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 372

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G+      +L  +     T N+  +N +I  LC +GR+ EA  L +++    C+
Sbjct: 373 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 432

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++ ++NT+I  LC       A  +FE ++ E G +   + +TYN+II  L +DG    A
Sbjct: 433 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEE-GVVA--NGITYNTIIHALLRDGRWQDA 489

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L  +M     + +V++YN LI   C   +   +  L  EM + G++P+ V++N +I+ 
Sbjct: 490 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 549

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK+ ++     L + M+ +G+ PD VTYN+L++G C +G +  A  L   + ++    D
Sbjct: 550 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 609

Query: 364 VYSYNILINANCKDQKVEDAVCL 386
           + +YNILI+ +CK + ++DA  L
Sbjct: 610 IITYNILISWHCKVRLLDDAAML 632



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 3/193 (1%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           H   N    EA + F+ +++        ++  ++  L ++ ++   V L K +  +G   
Sbjct: 444 HLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSL 503

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D+   N LI  +CK G    + V+L  +      PN V++N LI+ LC E R+ +A  L 
Sbjct: 504 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 563

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           K++      P++VT+NTLINGLC+      AL L E++ NE      PD++TYN +I   
Sbjct: 564 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEN---VHPDIITYNILISWH 620

Query: 235 CKDGFVDKAKELL 247
           CK   +D A  LL
Sbjct: 621 CKVRLLDDAAMLL 633



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 67/145 (46%)

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + V P +FTF      LC+ G   EA+ + + +    C      Y  +I+ LC  G +  
Sbjct: 153 DRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTE 212

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  L + +   G   DV T   ++  +C  G++ +A  L+  M  K C+P  +T+  LL+
Sbjct: 213 AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQ 272

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVV 572
           G  +  +  +   +L ++    +V+
Sbjct: 273 GLCRVRQADEARAMLGRVPELNVVL 297


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 251/493 (50%), Gaps = 29/493 (5%)

Query: 64  EAVYFFDCMIKMKPSPGMT-SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +A+  +  M+     P  T +F +    L +  + +  ++L + +  +G  PD  +   +
Sbjct: 157 DALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTV 216

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC  G  + A  +L  +L      +  TF+ ++ G+C  GR+ EAARL  ++    C
Sbjct: 217 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 276

Query: 183 DPNVVTFNTLINGLCRTR--------------------NTLVALKLFEEMVNEFGAI--- 219
            P V+T+  L+ GLCR R                    NT++   L E  + E   +   
Sbjct: 277 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYET 336

Query: 220 -----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                C+PD  TY+ ++ GLCK G +  A  LL +M+ +   PNV+TY  ++  FC    
Sbjct: 337 MGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGM 396

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           W + + L  EM   G+  +   +N MI   CKDG+MD+   L++ M  +G NPD  +YN+
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 456

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           ++   C   ++  A  +F +++ +G   +  +YN +I+A  +D + +DAV L +EM+   
Sbjct: 457 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
               V++YN L+  + + GN+  +L L+++M    + P++ ++   I  LCK   V +A+
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           ++ + + N      I TYN LINGLCKMG +  A  L  +L ++   PD++T + +I W 
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 636

Query: 515 CKEGQMDKANDLL 527
           CK   +D A  LL
Sbjct: 637 CKVRLLDDAAMLL 649



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 252/494 (51%), Gaps = 8/494 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAF 136
            P   S+ ++L++LA+   +   ++L++R+ + + + P  F   +    LC++G  + A 
Sbjct: 136 QPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEAL 195

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +L  + R    P+ V +  +I+ LC +G + EAA L  ++ +  C  +V TF+ ++ G+
Sbjct: 196 ALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGM 255

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C       A +L + M+ +    C P V+TY  ++ GLC+    D+A+ +L ++ + N  
Sbjct: 256 CGLGRVREAARLVDRMMTKG---CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN-- 310

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
             V+ +N++I G        EA  L+  M   G QPD  T++ +++  CK G++    RL
Sbjct: 311 --VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRL 368

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L  M ++G  P+ VTY  ++  FC  G     R L   M +KG   +   YN +I A CK
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 428

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           D ++++A+ L +EM S+   P + +YNT++  L     + +A  + + +    VV +  T
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + T I  L ++G   +AV++ + +    C L + +YN LI  +CK G +  +  L   + 
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG  P+ V+ + +I  LCKE ++  A +L   M  +   P  VT+ TL+ G  +     
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 608

Query: 557 KVVVLLHKMAAEKL 570
             + LL K+  E +
Sbjct: 609 AALNLLEKLHNENV 622



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 227/455 (49%), Gaps = 9/455 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           P+  ++N +++ L       +A  L++++ +     P   TF      LCR      AL 
Sbjct: 137 PSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALA 196

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L   M       C PD V Y ++I  LC  G V +A  LL +M       +V T++ ++ 
Sbjct: 197 LLRGMARHG---CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C +   +EA  L   MM  G  P V+T+  ++   C+  + D+       M+ R    
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPEL 309

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + V +N+++ G    G+++ A EL+ +M  KGC+ D ++Y+IL++  CK  ++  AV L 
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLL 369

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           REM  +   P+V+TY  +L    + G   D   L+++M    +  +S  +   I  LCK+
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + EA+ + Q +R+  C   I +YN +I  LC   +++ A  +F  L  +G + + +T 
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 489

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +T+IH L ++G+   A  L  +M    C    V++  L++   ++    + +VLL +MA 
Sbjct: 490 NTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 549

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           + +  +++S +  ++  L K+++ R+ L   + +L
Sbjct: 550 KGIKPNNVSYNI-LISELCKERRVRDALELSKQML 583



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 172/329 (52%), Gaps = 3/329 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   ++ M      P   +++IL+  L K  +  + V L + +   G  P++    +++
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVL 388

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G+      +L  +     T N+  +N +I  LC +GR+ EA  L +++    C+
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 448

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++ ++NT+I  LC       A  +FE ++ E G +   + +TYN+II  L +DG    A
Sbjct: 449 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEE-GVVA--NGITYNTIIHALLRDGRWQDA 505

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L  +M     + +V++YN LI   C   +   +  L  EM + G++P+ V++N +I+ 
Sbjct: 506 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 565

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK+ ++     L + M+ +G+ PD VTYN+L++G C +G +  A  L   + ++    D
Sbjct: 566 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLS 392
           + +YNILI+ +CK + ++DA  L    ++
Sbjct: 626 IITYNILISWHCKVRLLDDAAMLLNRAMA 654



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 158/305 (51%), Gaps = 5/305 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I+S  AV     M K   +P + ++TI+L    KN  +D   +L + +++ GL  +
Sbjct: 358 KLGRISS--AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 415

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N +I  LCK G    A  ++  +      P+  ++N +I  LC   ++ EA  +F+
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            L       N +T+NT+I+ L R      A++L +EM+      C  DVV+YN +I  +C
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG---CSLDVVSYNGLIKAMC 532

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           KDG VD++  LL +M ++ I PN ++YN LI   C     ++A  L  +M++ G+ PD+V
Sbjct: 533 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 592

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +IN  CK G M     LLE +    V+PD +TYN L+   C V  +  A  L    
Sbjct: 593 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRA 652

Query: 356 VSKGC 360
           ++  C
Sbjct: 653 MAAVC 657



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 32/239 (13%)

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGD 417
           G +    SYN++++   +     DA+ LYR M+  +R+ P+  T+      L ++G   +
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           AL L+  M  +  VPD+  + T I  LC  G V EA  +   +    C   + T++ ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK--------------------- 516
           G+C +GR++ A +L  R+  KG +P V+T   ++  LC+                     
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL 313

Query: 517 ----------EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
                     EG++ +A +L   M  K C P   T+  L+ G  +  + S  V LL +M
Sbjct: 314 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 3/193 (1%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           H   N    EA + F+ +++        ++  ++  L ++ ++   V L K +  +G   
Sbjct: 460 HLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSL 519

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D+   N LI  +CK G    + V+L  +      PN V++N LI+ LC E R+ +A  L 
Sbjct: 520 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 579

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           K++      P++VT+NTLINGLC+      AL L E++ NE      PD++TYN +I   
Sbjct: 580 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEN---VHPDIITYNILISWH 636

Query: 235 CKDGFVDKAKELL 247
           CK   +D A  LL
Sbjct: 637 CKVRLLDDAAMLL 649


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 151/458 (32%), Positives = 234/458 (51%), Gaps = 47/458 (10%)

Query: 29  PPN-PKTDLSSHHFKDGTSIAKFLNDRHKSGNITSN--------EAVYFFDCMIKMKPSP 79
           PP+ P    S+HH  + ++  K  +    +G   SN        +A+  F  MI M P P
Sbjct: 25  PPDFPSFLFSNHHHLNTSTCTKKPSLPQNNGGFVSNNSNDIGIDDAMASFYRMIHMNPRP 84

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
                   L  +AK KQY TVVSL  +++  G+  + + LN+LIN LC++     A  VL
Sbjct: 85  SFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVL 144

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN--------------------- 178
            ++ +    P++VTF  LINGLC EGRI EA  LF ++                      
Sbjct: 145 SKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKK 204

Query: 179 --------VF------ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
                   VF        +PN+ T+N L+NG C       A K+FE MV   G  C P V
Sbjct: 205 GMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMV---GKGCAPSV 261

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
            +Y+ +I+G CK   +D+AK LL QM ++ + PN +TYN+L+ G C      EA+ LF +
Sbjct: 262 HSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKK 321

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M  +G+ P++ T++ +++  CK G +++  +LL  M +R + PD V YN L+ G  + G+
Sbjct: 322 MCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGK 381

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A+ELF  + + G R  V +YNI+I    K+   ++A  L+R+M  +   P   +YN 
Sbjct: 382 LEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNV 441

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           ++ G  Q  +   A++LID+M       DS TF   +D
Sbjct: 442 IIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/406 (33%), Positives = 223/406 (54%), Gaps = 4/406 (0%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ V     +  + + +     + L  +M + FG +   D  T N +I+ LC+   +  A
Sbjct: 84  PSFVELGKFLGSIAKKKQYSTVVSLCNQM-DLFG-VAHNDY-TLNILINSLCRLSHIHFA 140

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +L +M    I P+ +T+ +LI G C     KEA  LF EM      P+ VTF  +++ 
Sbjct: 141 VSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDV 200

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G + +   + E M ++GV P+  TYN+LM+G+CL   ++ A ++F  MV KGC   
Sbjct: 201 LCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPS 260

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V+SY+ILIN  CK +++++A  L  +M  + + P+ +TYNTL+ GL    +L +A +L  
Sbjct: 261 VHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFK 320

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           KM  + ++P+  T++  +DGLCK+G + EA+++  +++  K E  I  YN LI G+   G
Sbjct: 321 KMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAG 380

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +L+ A +LF +L   G  P V T + MI  L KEG  D+A  L   ME    +P   ++ 
Sbjct: 381 KLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYN 440

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
            +++GF+QN   S  + L+ +M   +   +D S    ++DL S D+
Sbjct: 441 VIIQGFLQNQDPSTAIQLIDEMVGRRF-SADSSTFKMLLDLESHDE 485



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 141/297 (47%), Gaps = 1/297 (0%)

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
             ++ N  D  +D        MI     P  V     +       + S    L   M   
Sbjct: 56  GFVSNNSNDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLF 115

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G  H+ Y+ NILIN+ C+   +  AV +  +M    I+P  +T+ TL++GL   G + +A
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEA 175

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           ++L ++M   D +P++ TF   +D LCK G V EA  VF+ +     E  I TYN L+NG
Sbjct: 176 VELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNG 235

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            C    +  A K+F  +  KG  P V + S +I+  CK  ++D+A  LL  M  K  +P+
Sbjct: 236 YCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPN 295

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            VT+ TL++G    +   +   L  KM +  + + +L   S ++D L K     E L
Sbjct: 296 TVTYNTLMQGLCHASSLLEAQELFKKMCSSGM-LPNLRTYSILLDGLCKHGHLEEAL 351



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 137/299 (45%), Gaps = 3/299 (1%)

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
           +DD   A   F  M+    +P  V     +    K  +   V  L   M   GV  +  T
Sbjct: 67  IDD---AMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYT 123

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
            N L++  C +  I  A  +   M   G + D  ++  LIN  C + ++++AV L+ EM 
Sbjct: 124 LNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA 183

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
                P+ +T+  L+  L + G + +A  + + M    V P+ +T+   ++G C    + 
Sbjct: 184 GRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMN 243

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A +VF+ +    C   + +Y+ LING CK  R+  A  L  ++  K  IP+ VT +T++
Sbjct: 244 DASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLM 303

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             LC    + +A +L   M +   +P+  T+  LL G  ++    + + LL  M   KL
Sbjct: 304 QGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKL 362


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 255/511 (49%), Gaps = 4/511 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K +  P   S    L  L+K  + D     F+ +   G+ P +F  N++I  +CK G 
Sbjct: 88  MTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGD 147

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +  ++ +   TP+ VT+N LI+G    G + E+  LF+++    C+P+V+T+N 
Sbjct: 148 MLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNA 207

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LIN  C+ +  L A + F EM ++     KP+V++Y+++ID LCK+G +  A +  + M 
Sbjct: 208 LINSFCKFKGMLRAFEFFREMKDK---DLKPNVISYSTLIDALCKEGMMQMAIKFFVDMT 264

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              + PN  TY+SLI   C   +  EA  L  EM+   V  ++VT+  +++  C++G M+
Sbjct: 265 RVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMN 324

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   L   M + GV P+   Y +L+ G   V  + +A ELF  M  K  + D+  +  ++
Sbjct: 325 EAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIV 384

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              C + K+E+   +  EM    I  + + Y TL+   F+ GN  +A+ L+++M+     
Sbjct: 385 WGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTE 444

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
               TF   IDGLCK G V EA+  F  + +   +  +  Y  LI+GLCK   +  A KL
Sbjct: 445 VTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKL 504

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F  +Q K  IPD +  + MI    K G   +A ++   M           + +L+ G  Q
Sbjct: 505 FDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQ 564

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
             +  +    L +M   K ++ D +L ++++
Sbjct: 565 CGQVQQARKFLAEMIG-KGIIPDETLCTRLL 594



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 268/509 (52%), Gaps = 4/509 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG   F  L ++L +    +     F R+    + P     N  ++ L K G    +   
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              ++ +   P   T+N +I  +C EG ++ A  LF+++      P++VT+NTLI+G  +
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 ++ LFEEM  +F   C+PDV+TYN++I+  CK   + +A E   +MKD+++ PN
Sbjct: 180 IGLLDESVCLFEEM--KFMG-CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           VI+Y++LI   C     + A   F++M   G+ P+  T++++I+ NCK G + +   L +
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+Q  V+ + VTY +L+DG C  G ++ A ELF +M   G   ++ +Y  LI+ + K +
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++ A+ L+ EM  + I+P ++ + T++ GL     L +   ++ +M+ + +  +   + 
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYT 416

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T +D   K G   EA+ + + +R+   E+ + T+  LI+GLCK G ++ A   F R+   
Sbjct: 417 TLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDH 476

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
              P+V   + +I  LCK   +  A  L  +M+ KN +P ++ +  ++ G +++    + 
Sbjct: 477 DLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEA 536

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           + + +KM  E  +  DL   + +V  LS+
Sbjct: 537 LNMRNKM-MEMGIELDLYAYTSLVWGLSQ 564



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 252/513 (49%), Gaps = 14/513 (2%)

Query: 33  KTDLSSHHFKD--GTSIAK-------FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTS 83
           + DLS   F+D  G  IA         +    K G++ +  A   F+ M KM  +P + +
Sbjct: 112 EGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLT--ARSLFEQMKKMGLTPDIVT 169

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  L+    K    D  V LF+ +   G  PD+   N LIN  CK      AF     + 
Sbjct: 170 YNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMK 229

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                PN ++++ LI+ LC EG +  A + F  +      PN  T+++LI+  C+  N  
Sbjct: 230 DKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLG 289

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  L +EM+ E   +   ++VTY +++DGLC++G +++A+EL   M    + PN+  Y 
Sbjct: 290 EAFMLADEMLQEHVDL---NIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYT 346

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI G   V    +A  LF EM +  ++PD++ +  ++   C + K+++   ++  M + 
Sbjct: 347 ALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKES 406

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+  + V Y +LMD +   G  + A  L   M   G    V ++  LI+  CK   V++A
Sbjct: 407 GIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEA 466

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           +  +  M    ++P+V  Y  L+ GL +   +GDA KL D+MQ  +++PD   +   IDG
Sbjct: 467 IYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDG 526

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             K+G   EA+ +   +     EL +  Y  L+ GL + G+++ A K    +  KG IPD
Sbjct: 527 NLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPD 586

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
              C+ ++    + G +D+A +L  ++  K  +
Sbjct: 587 ETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 197/383 (51%), Gaps = 1/383 (0%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           +C P    ++++   L + G ++ A +  L+M    + P   + N+ +       +   +
Sbjct: 57  VCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLS 116

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           +  F +M+  G+ P V T+N MI + CK+G M     L E M + G+ PD VTYN+L+DG
Sbjct: 117 RDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDG 176

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +  +G +  +  LF  M   GC  DV +YN LIN+ CK + +  A   +REM  + ++P+
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           VI+Y+TL+  L + G +  A+K    M    ++P+ FT+++ ID  CK G + EA  +  
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +     +L I TY  L++GLC+ G +  A +LF  +   G  P++   + +IH   K  
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            MDKA +L  +M  K+  P  + + T++ G    +K  +  +++ +M  E  + ++  + 
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEM-KESGIGANPVIY 415

Query: 579 SKVVDLLSKDKKYRECLNQFRHL 601
           + ++D   K     E +N    +
Sbjct: 416 TTLMDAYFKAGNRTEAINLLEEM 438



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 147/304 (48%), Gaps = 11/304 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   F  M K   +P + ++T L+    K +  D  + LF  +    + PD+ +   +
Sbjct: 324 NEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTI 383

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC         +++  +  S    N V +  L++     G   EA  L +++     
Sbjct: 384 VWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGT 443

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI----CKPDVVTYNSIIDGLCKDG 238
           +  VVTF  LI+GLC+         L +E +  FG +     +P+V  Y ++IDGLCK+ 
Sbjct: 444 EVTVVTFCALIDGLCKR-------GLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNN 496

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +  AK+L  +M+D+N+ P+ I Y ++I G     +++EA  +  +MM+ G++ D+  + 
Sbjct: 497 CIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYT 556

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           +++    + G++ +  + L  MI +G+ PD      L+     +G I  A EL   +V K
Sbjct: 557 SLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEK 616

Query: 359 GCRH 362
           G  H
Sbjct: 617 GLIH 620


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 263/530 (49%), Gaps = 10/530 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKN-KQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           EA   F+ M+       + S  + LT L+K+  +  T + +F+     G+  ++   N++
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ +C++G    A  +L  +    +TP+ ++++ ++NG C  G + +  +L + +     
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN   + ++I  LCR      A + F EM+ + G +  PD V Y ++IDG CK G +  
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GIL--PDTVVYTTLIDGFCKRGDIRA 369

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +   +M  R+I P+V+TY ++I GFC + D  EA  LF EM   G++PD VTF  +IN
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G M    R+   MIQ G +P+ VTY +L+DG C  G +  A EL   M   G + 
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++++YN ++N  CK   +E+AV L  E  +  +    +TY TL+    + G +  A +++
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M    + P   TF   ++G C +G + +  ++   +          T+N L+   C  
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             LK A  ++  +  +G  PD  T   ++   CK   M +A  L  +M+ K    S  T+
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
             L++GF++  K  +   +  +M  E      L+   ++ D  S D KY+
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRRE-----GLAADKEIFDFFS-DTKYK 713



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 278/570 (48%), Gaps = 10/570 (1%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTS--FTILLTMLAK 93
           ++S   K   S+     +R K  N+T +  V FFD ++      G     F +   +L  
Sbjct: 130 VASKDLKVAQSLISSFWERPKL-NVT-DSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVD 187

Query: 94  NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI-TSGAFVVLGRILRSCFTPNTV 152
                    +F+++ + GL   +   N+ +  L K    T+ A +V           N  
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           ++N +I+ +C  GRI EA  L   + +    P+V++++T++NG CR        KL E M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
             +     KP+   Y SII  LC+   + +A+E   +M  + I P+ + Y +LI GFC  
Sbjct: 308 KRKG---LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
            D + A   F EM    + PDV+T+ A+I+  C+ G M +  +L   M  +G+ PD+VT+
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
             L++G+C  G +  A  +   M+  GC  +V +Y  LI+  CK+  ++ A  L  EM  
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             ++P++ TYN++++GL + GN+ +A+KL+ + +   +  D+ T+ T +D  CK+G + +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A ++ + +     +  I T+N L+NG C  G L+   KL + +  KG  P+  T ++++ 
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             C    +  A  +  DM ++   P   T+  L++G  +     +   L  +M  +   V
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664

Query: 573 SDLSLSSKVVDLLSKDK--KYRECLNQFRH 600
           S  + S  +   L + K  + RE  +Q R 
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 167/365 (45%), Gaps = 42/365 (11%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G+I +  A  FF  M     +P + ++T +++   +         LF  +   GL PD
Sbjct: 363 KRGDIRA--ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 LIN  CK G    AF V   ++++  +PN VT+  LI+GLC EG +  A  L  
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGL 234
           ++      PN+ T+N+++NGLC++ N   A+KL    V EF A     D VTY +++D  
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----VGEFEAAGLNADTVTYTTLMDAY 536

Query: 235 CKDGFVDKAKELLLQMKDRN-----------------------------------INPNV 259
           CK G +DKA+E+L +M  +                                    I PN 
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
            T+NSL+  +C  ++ K A  ++ +M   GV PD  T+  ++  +CK   M +   L + 
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M  +G +    TY+ L+ GF    +   ARE+F  M  +G   D   ++   +   K ++
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716

Query: 380 VEDAV 384
            +  V
Sbjct: 717 PDTIV 721


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 261/506 (51%), Gaps = 10/506 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           ++ Y    M K   +P + ++  +L    K  ++   + L   + S G+  D+   N+LI
Sbjct: 211 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 270

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC+    +  +++L  + +    PN VT+N LING   EG+++ A++L  ++  F   
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VTFN LI+G     N   ALK+F  M  +      P  V+Y  ++DGLCK+   D A
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKG---LTPSEVSYGVLLDGLCKNAEFDLA 387

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +   ++MK   +    ITY  +I G C      EA  L  EM  +G+ PD+VT++A+IN 
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+      ++  + + G++P+ + Y++L+   C +G +  A  ++ +M+ +G   D
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK--- 420
            +++N+L+ + CK  KV +A    R M S+ I P+ ++++ L++G    GN G+ LK   
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING---YGNSGEGLKAFS 564

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           + D+M      P  FT+ + + GLCK G + EA +  +++      +    YN L+  +C
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK-NCVPSE 539
           K G L  A  LF  +  +  +PD  T +++I  LC++G+   A     + EA+ N +P++
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKM 565
           V +   + G  +  +    +    +M
Sbjct: 685 VMYTCFVDGMFKAGQWKAGIYFREQM 710



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 263/525 (50%), Gaps = 3/525 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F   M+K K  P + +F IL+ +L     ++    L +++  +G  P +   N +++  C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    A  +L  +       +  T+N LI+ LC   RI +   L + +      PN V
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+NTLING       L+A +L  EM++ FG    P+ VT+N++IDG   +G   +A ++ 
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLS-FG--LSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M+ + + P+ ++Y  L+ G C   ++  A+  ++ M  NGV    +T+  MI+  CK+
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D+   LL  M + G++PD VTY++L++GFC VGR   A+E+   +   G   +   Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           + LI   C+   +++A+ +Y  M+ E       T+N L++ L + G + +A + +  M  
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + ++P++ +F   I+G   +G  L+A  VF  +          TY  L+ GLCK G L+ 
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A K    L       D V  +T++  +CK G + KA  L  +M  ++ +P   T+ +L+ 
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           G  +  K    ++   +  A   V+ +  + +  VD + K  +++
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 701



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 246/541 (45%), Gaps = 38/541 (7%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + IL+ +  +       + +F+ +   G  P ++  N ++  + K G     +  L  +L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           +    P+  TFN LIN LCAEG   +++ L +K+      P +VT+NT+++  C+     
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A++L + M ++       DV TYN +I  LC+   + K   LL  M+ R I+PN +TYN
Sbjct: 246 AAIELLDHMKSKG---VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI GF        A  L  EM+  G+ P+ VTFNA+I+ +  +G   +  ++  +M  +
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 362

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P  V+Y  L+DG C       AR  ++ M   G      +Y  +I+  CK+  +++A
Sbjct: 363 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGN----------------------------- 414
           V L  EM  + I P ++TY+ L++G  +VG                              
Sbjct: 423 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 482

Query: 415 ------LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
                 L +A+++ + M L     D FTF   +  LCK G V EA +  + + +      
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 542

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
             +++CLING    G    A  +F  +   G  P   T  +++  LCK G + +A   L 
Sbjct: 543 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 602

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            + A       V + TLL    ++   +K V L  +M    ++    + +S +  L  K 
Sbjct: 603 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662

Query: 589 K 589
           K
Sbjct: 663 K 663



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 230/448 (51%), Gaps = 4/448 (0%)

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G +S  F  L    R C   N   ++ LI     EG I ++  +F+ + ++  +P+V T 
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N ++  + ++   +      +EM+     IC PDV T+N +I+ LC +G  +K+  L+ +
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKR--KIC-PDVATFNILINVLCAEGSFEKSSYLMQK 218

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+     P ++TYN+++  +C    +K A  L   M   GV  DV T+N +I+  C+  +
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 278

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + K   LL  M +R ++P+ VTYN+L++GF   G++  A +L   M+S G   +  ++N 
Sbjct: 279 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 338

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+ +  +   ++A+ ++  M ++ + PS ++Y  LL GL +      A     +M+ N 
Sbjct: 339 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           V     T+   IDGLCKNGF+ EAV +   +     +  I TY+ LING CK+GR KTA 
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 458

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++  R+   G  P+ +  ST+I+  C+ G + +A  +   M  +       TF  L+   
Sbjct: 459 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 518

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
            +  K ++    +  M ++ ++ + +S 
Sbjct: 519 CKAGKVAEAEEFMRCMTSDGILPNTVSF 546



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 229/503 (45%), Gaps = 20/503 (3%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKS-GNITSNEAVYFFDCMIKMKPSP 79
           N   SFG  PN  T                L D H S GN    EA+  F  M     +P
Sbjct: 322 NEMLSFGLSPNHVT-------------FNALIDGHISEGNF--KEALKMFYMMEAKGLTP 366

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
              S+ +LL  L KN ++D     + R+  NG+         +I+ LCK G    A V+L
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             + +    P+ VT++ LING C  GR   A  +  ++      PN + ++TLI   CR 
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A++++E M+ E       D  T+N ++  LCK G V +A+E +  M    I PN 
Sbjct: 487 GCLKEAIRIYEAMILEGHT---RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           ++++ LI G+    +  +A  +F EM   G  P   T+ +++   CK G + +  + L+ 
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           +       DTV YN+L+   C  G +++A  LF  MV +    D Y+Y  LI+  C+  K
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663

Query: 380 VEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
              A+   +E  +   + P+ + Y   + G+F+ G     +   ++M      PD  T  
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             IDG  + G + +   +   + N      + TYN L++G  K   + T+  L+  +   
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783

Query: 499 GPIPDVVTCSTMIHWLCKEGQMD 521
           G +PD +TC +++  +C+   ++
Sbjct: 784 GILPDKLTCHSLVLGICESNMLE 806



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 230/469 (49%), Gaps = 8/469 (1%)

Query: 97  YDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNF 156
           +  +++ ++  NSN   P ++  ++LI    + G+   +  +   +    F P+  T N 
Sbjct: 109 FGALMTTYRLCNSN---PSVY--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNA 163

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           ++  +   G  +      K++      P+V TFN LIN LC   +   +  L ++M    
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG 223

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
            A   P +VTYN+++   CK G    A ELL  MK + ++ +V TYN LI   C  +   
Sbjct: 224 YA---PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +   L  +M    + P+ VT+N +IN    +GK+   ++LL  M+  G++P+ VT+N+L+
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           DG    G    A ++F  M +KG      SY +L++  CK+ + + A   Y  M    + 
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
              ITY  ++ GL + G L +A+ L+++M  + + PD  T++  I+G CK G    A ++
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              I           Y+ LI   C+MG LK A +++  +  +G   D  T + ++  LCK
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            G++ +A + +  M +   +P+ V+F  L+ G+  + +  K   +  +M
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 137/553 (24%), Positives = 247/553 (44%), Gaps = 39/553 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV   + M K    P + +++ L+    K  ++ T   +  R+   GL P+  + + L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+MG    A  +   ++    T +  TFN L+  LC  G++ EA    + +     
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN V+F+ LING   +   L A  +F+EM  + G    P   TY S++ GLCK G + +
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMT-KVGH--HPTFFTYGSLLKGLCKGGHLRE 596

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++ L  +       + + YN+L+   C   +  +A  LF EM+   + PD  T+ ++I+
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656

Query: 303 YNCKDGK------------------------------MDKVNR------LLELMIQRGVN 326
             C+ GK                              M K  +        E M   G  
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 716

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD VT N+++DG+  +G+I +  +L   M ++    ++ +YNIL++   K + V  +  L
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           YR ++   I P  +T ++L+ G+ +   L   LK++       V  D +TF   I   C 
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           NG +  A  + + + +    L  +T + +++ L +  R + +  + H +  +G  P+   
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 896

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              +I+ LC+ G +  A  +  +M A    P  V    ++R   +  K  +  +LL  M 
Sbjct: 897 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956

Query: 567 AEKLVVSDLSLSS 579
             KLV +  S ++
Sbjct: 957 KMKLVPTIASFTT 969



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/547 (26%), Positives = 248/547 (45%), Gaps = 60/547 (10%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            +A   FD M K+   P   ++  LL  L K           K L++     D  + N L+
Sbjct: 561  KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR----IMEAARLFKKLNV 179
              +CK G  + A  + G +++    P++ T+  LI+GLC +G+    I+ A     + NV
Sbjct: 621  TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680

Query: 180  FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
                PN V +   ++G+ +       +  F E ++  G    PD+VT N++IDG  + G 
Sbjct: 681  L---PNKVMYTCFVDGMFKAGQWKAGI-YFREQMDNLGHT--PDIVTTNAMIDGYSRMGK 734

Query: 240  VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
            ++K  +LL +M ++N  PN+ TYN L+ G+    D   +  L+  ++ NG+ PD +T ++
Sbjct: 735  IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 794

Query: 300  MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS-- 357
            ++   C+   ++   ++L+  I RGV  D  T+N L+   C  G I+ A +L   M S  
Sbjct: 795  LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 854

Query: 358  ---------------------------------KGCRHDVYSYNILINANCKDQKVEDAV 384
                                             +G   +   Y  LIN  C+   ++ A 
Sbjct: 855  ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914

Query: 385  CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
             +  EM++ +I P  +  + ++  L + G   +A  L+  M    +VP   +F T +   
Sbjct: 915  VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 974

Query: 445  CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            CKNG V+EA+++   + NC  +L + +YN LI GLC  G +  A +L+  ++  G + + 
Sbjct: 975  CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANA 1034

Query: 505  VTCSTMIH-WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
             T   +I   L +E     A+ +L D+              L RGF+ +   S+      
Sbjct: 1035 TTYKALIRGLLARETAFSGADIILKDL--------------LARGFITSMSLSQDSHRNL 1080

Query: 564  KMAAEKL 570
            KMA EKL
Sbjct: 1081 KMAMEKL 1087



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 141/565 (24%), Positives = 245/565 (43%), Gaps = 41/565 (7%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            EA+  ++ MI    +    +F +L+T L K  +        + + S+G+ P+    + LI
Sbjct: 491  EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
            N     G    AF V   + +    P   T+  L+ GLC  G + EA +  K L+     
Sbjct: 551  NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610

Query: 184  PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
             + V +NTL+  +C++ N   A+ LF EMV        PD  TY S+I GLC+ G    A
Sbjct: 611  VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS---ILPDSYTYTSLISGLCRKGKTVIA 667

Query: 244  KELLLQMKDR-NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMI 301
                 + + R N+ PN + Y   + G      WK A   F E MDN G  PD+VT NAMI
Sbjct: 668  ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK-AGIYFREQMDNLGHTPDIVTTNAMI 726

Query: 302  NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-- 359
            +   + GK++K N LL  M  +   P+  TYN L+ G+     +S +  L+ S++  G  
Sbjct: 727  DGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 786

Query: 360  ------------------------------CRH---DVYSYNILINANCKDQKVEDAVCL 386
                                          CR    D Y++N+LI+  C + ++  A  L
Sbjct: 787  PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846

Query: 387  YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             + M S  I     T + ++S L +     ++  ++ +M    + P+S  +   I+GLC+
Sbjct: 847  VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 906

Query: 447  NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
             G +  A  V + +   K        + ++  L K G+   A  L   +     +P + +
Sbjct: 907  VGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 966

Query: 507  CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
             +T++H  CK G + +A +L + M         V++  L+ G       +    L  +M 
Sbjct: 967  FTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1026

Query: 567  AEKLVVSDLSLSSKVVDLLSKDKKY 591
             +  + +  +  + +  LL+++  +
Sbjct: 1027 GDGFLANATTYKALIRGLLARETAF 1051



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 52/115 (45%)

Query: 62   SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            ++EA      M+KMK  P + SFT L+ +  KN      + L   +++ GL  DL   N+
Sbjct: 945  ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004

Query: 122  LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            LI  LC  G  + AF +   +    F  N  T+  LI GL A       A +  K
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 247/489 (50%), Gaps = 3/489 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   +D M+         S  +L+  L    + +  + L +     G  P +   N+L
Sbjct: 186 DDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVL 245

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C+ G      ++LG +    F P  VT+  LIN L  +G + +   LF ++     
Sbjct: 246 IDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGL 305

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV  +N++I+ LC+  +   A+ + ++M   F + C PD++T+N++I GLC +G V K
Sbjct: 306 SPNVQIYNSVIDALCKCWSATQAMVILKQM---FASGCDPDIITFNTLITGLCHEGHVRK 362

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+  L +   R +NPN ++Y  LI GFC   +   A  L +EMM  G  PDVVTF A+I+
Sbjct: 363 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIH 422

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                GK+ +   + E M +R V PD   YN L+ G C    +  A+ +   M+ K  + 
Sbjct: 423 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQP 482

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D + Y  LI+   + + + DA  ++  M  + +RP +++ N ++ G  Q G + +A+  +
Sbjct: 483 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCM 542

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M+    +PD FT+ T I G  K G +  A++    +   KC+  + TY+ LING CK 
Sbjct: 543 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 602

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G   +A  LF  +Q +   P+VVT + +I  L K+ ++ +A      M   +C P++VT 
Sbjct: 603 GDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 662

Query: 543 CTLLRGFVQ 551
             L+ G   
Sbjct: 663 HYLVNGLTS 671



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 230/439 (52%), Gaps = 3/439 (0%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           L+ GLC EGR+ E  +L +      C P+VV +N LI+G CR  +    L L  EM  + 
Sbjct: 210 LVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAK- 268

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
           G +  P +VTY S+I+ L K G ++K   L L+M+ R ++PNV  YNS+I   C      
Sbjct: 269 GFL--PTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSAT 326

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  +  +M  +G  PD++TFN +I   C +G + K    L   I+R +NP+ ++Y  L+
Sbjct: 327 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 386

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            GFC+ G +  A +L + M+ +G   DV ++  LI+      KV +A+ +  +M   ++ 
Sbjct: 387 HGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 446

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P V  YN L+SGL +   L  A  ++++M   +V PD F +AT IDG  ++  + +A ++
Sbjct: 447 PDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI 506

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F+ + +      I + N +I G C+ G +  A      ++  G IPD  T +T+I    K
Sbjct: 507 FEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 566

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +G ++ A   L DM  + C P+ VT+ +L+ G+ +         L   M AE L  + ++
Sbjct: 567 QGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVT 626

Query: 577 LSSKVVDLLSKDKKYRECL 595
            +  +  L  KDK  R  L
Sbjct: 627 YTILIGSLFKKDKVLRAGL 645



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 234/491 (47%), Gaps = 18/491 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L+  L K    + + SLF  +   GL P++ + N +I+ LCK    + A V+
Sbjct: 272 PTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVI 331

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L ++  S   P+ +TFN LI GLC EG + +A    ++      +PN +++  LI+G C 
Sbjct: 332 LKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCM 391

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
               + A  L  EM+   G    PDVVT+ ++I GL   G V +A  +  +M +R + P+
Sbjct: 392 RGELMAASDLLMEMM---GRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 448

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V  YN LI G C       AK +  EM++  VQPD   +  +I+   +   +    ++ E
Sbjct: 449 VNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 508

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M  +GV PD V+ N+++ G+C  G +S A     +M   GC  D ++Y  +I+   K  
Sbjct: 509 FMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 568

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +  A+    +M+  + +P+V+TY++L++G  + G+   A  L   MQ   + P+  T+ 
Sbjct: 569 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYT 628

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL--CKMGRLKTAC------- 489
             I  L K   VL A   F+ +    C     T + L+NGL  C    + + C       
Sbjct: 629 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 688

Query: 490 ------KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
                  +F +L      P     + +I  LC+   + +A D    M  K  VP+ +TF 
Sbjct: 689 GKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 748

Query: 544 TLLRGFVQNNK 554
           +LL GF    K
Sbjct: 749 SLLYGFCSVGK 759



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 146/350 (41%), Gaps = 37/350 (10%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLE-LMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           G  P      A++      G + K   + E L  Q G  P+    N L+       R   
Sbjct: 128 GAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDD 187

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           AR+L+  M+ +    D YS  +L+   C + +VE+ + L          P V+ YN L+ 
Sbjct: 188 ARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLID 247

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G  + G++G  L L+ +M+    +P   T+ + I+ L K G + +   +F  +R      
Sbjct: 248 GYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSP 307

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK----- 522
            ++ YN +I+ LCK      A  +  ++   G  PD++T +T+I  LC EG + K     
Sbjct: 308 NVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 367

Query: 523 ------------------------------ANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
                                         A+DLL++M  +   P  VTF  L+ G V  
Sbjct: 368 REAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVA 427

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            K S+ +++  KM  E+ V  D+++ + ++  L K        N    +L
Sbjct: 428 GKVSEALIVREKM-TERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEML 476



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 47/279 (16%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTIL-------L 88
           + S +  D   I +F+  +    +I S  A      MIK     GM S  IL       +
Sbjct: 495 IRSENLGDARKIFEFMEHKGVRPDIVSCNA------MIKGYCQFGMMSEAILCMSNMRKV 548

Query: 89  TMLAKNKQYDTVVSLF-KRLNSNGLF------------PDLFVLNLLINCLCKMGITSGA 135
             +     Y TV+S + K+ N NG              P++   + LIN  CK G T  A
Sbjct: 549 GCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSA 608

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             +   +     +PN VT+  LI  L  + +++ A   F+ + +  C PN VT + L+NG
Sbjct: 609 EGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 668

Query: 196 L------------CRTRNTL---VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
           L            C T         L +F+++V + G    P    YN+II  LC+   +
Sbjct: 669 LTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG---DPRNSAYNAIIFSLCRHNML 725

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVD---DWK 276
            +A +   +M  +   PN IT+ SL+ GFC V    +W+
Sbjct: 726 REALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWR 764


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 156/514 (30%), Positives = 261/514 (50%), Gaps = 5/514 (0%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            SF +LL   A   Q    + +F  +   G    L   N L+N L + G    A  V  +
Sbjct: 95  ASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQ 154

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +  +   P+  T   +    C +GR+  AA   K++     D N+V ++ +++G CR   
Sbjct: 155 MRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQ 214

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD-RNINPNVI 260
           T VA KL   +  +      P+VVTY  ++ G CK+G +++A++++ ++K+   I  + +
Sbjct: 215 TEVARKLLHSLQVKG---LSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEV 271

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            Y +LI G+C     ++A  +  EM+D GVQ ++  +N MIN  CK G+M +V +LL+  
Sbjct: 272 AYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQAN 331

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
             RGVN D  +YN+L+DG+C  G +++A E    MV  G      +YN L+N  C    +
Sbjct: 332 EYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAI 391

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           +DA+ L+  ML   + P+ I+ +TLL G F+ G    AL L  +     +  +  T  T 
Sbjct: 392 DDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTV 451

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+GLCKN  + EA ++F  ++   C     TY  LI+G CK+G L  A ++   +++ G 
Sbjct: 452 INGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGF 511

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           +P V   ++ I  L    Q  K ND+ ++M AK   P+ VT+  L+ G+ +        +
Sbjct: 512 VPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACI 571

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           L  +M  EK +  +L + S +V    ++ K  E 
Sbjct: 572 LYFEM-VEKGLKPNLFICSVLVSCFYREGKVDEA 604



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 268/551 (48%), Gaps = 35/551 (6%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFK----DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           N +C  GR    +  L ++ ++    D  S    ++   + G +T  +A    D M++  
Sbjct: 313 NGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMT--KAFETCDMMVRNG 370

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
            +    ++  LL         D  + L+  +   G+ P+    + L++   K G T  A 
Sbjct: 371 FTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQAL 430

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +    L      N VT N +INGLC   R+ EA  LF ++  ++C  + +T+ TLI+G 
Sbjct: 431 NLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGY 490

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+  +   A ++  EM N  G +  P V  +NS I GL       K  ++ ++M  + ++
Sbjct: 491 CKLGDLGRATQIRIEMEN-LGFV--PSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLS 547

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN +TY +LI G+C   +  +A  L+ EM++ G++P++   + +++   ++GK+D+ N +
Sbjct: 548 PNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLV 607

Query: 317 LEL-----MIQ-------------------RGVNPDT--VTYNSLMDGFCLVGRISRARE 350
           L+      MIQ                    G N  +  + +N ++ G C +GR++ AR 
Sbjct: 608 LQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARN 667

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF  +  KG   D ++Y+ LI+       ++ A  L  EMLS R+ P+++TYN+L+ GL 
Sbjct: 668 LFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLC 727

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           +  N+  A+ L +K+Q   + P++ T+ T IDG CK+G   EA ++ Q +     +  + 
Sbjct: 728 KSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVF 787

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  LI+GLC  G ++ A KL  ++      P+ +T  T+I    + G M     L  +M
Sbjct: 788 TYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847

Query: 531 EAKNCVPSEVT 541
                +P+  T
Sbjct: 848 HICGLLPANWT 858



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 250/517 (48%), Gaps = 5/517 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+Y FD M K      + S   LL  L +     T V++F+++   G  PD F + ++ 
Sbjct: 112 DALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMA 171

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+ G  + A   L  +       N V ++ +++G C  G+   A +L   L V    
Sbjct: 172 KAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLS 231

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           PNVVT+  L+ G C+      A K+ +E+  NE   I   D V Y ++I+G C+ G ++ 
Sbjct: 232 PNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVI---DEVAYGALINGYCQRGRMED 288

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +  +M D  +  N+  YN++I G+C +    E + L       GV  D  ++N +++
Sbjct: 289 ANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVD 348

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ G M K     ++M++ G    T+TYN+L++GFC  G I  A +L+  M+ +G   
Sbjct: 349 GYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVP 408

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  S + L++   K  K E A+ L++E L+  +  +V+T NT+++GL +   + +A +L 
Sbjct: 409 NEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELF 468

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M+      DS T+ T IDG CK G +  A Q+   + N      +E +N  I GL   
Sbjct: 469 HRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIA 528

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            +      +   +  KG  P+ VT   +I   CKEG +  A  L  +M  K   P+    
Sbjct: 529 KQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFIC 588

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
             L+  F +  K  +  ++L K+A   + + D S S+
Sbjct: 589 SVLVSCFYREGKVDEANLVLQKLADTDM-IQDCSAST 624



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 229/460 (49%), Gaps = 12/460 (2%)

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           R LRSC        N L+N L   G I  A  +F+++      P+  T   +    CR  
Sbjct: 127 RTLRSC--------NRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDG 178

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A    +EM  E G     ++V Y++++DG C+ G  + A++LL  ++ + ++PNV+
Sbjct: 179 RVAHAADFLKEM-EEMG--LDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVV 235

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           TY  L+ G+C     +EA+ +  E+ +N  +  D V + A+IN  C+ G+M+  NR+ + 
Sbjct: 236 TYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDE 295

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           MI  GV  +   YN++++G+C +GR+    +L  +   +G   D YSYN L++  C+   
Sbjct: 296 MIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGF 355

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +  A      M+      + +TYNTLL+G    G + DALKL   M    VVP+  + +T
Sbjct: 356 MTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCST 415

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +DG  K G   +A+ +++          + T N +INGLCK  R+  A +LFHR++   
Sbjct: 416 LLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWS 475

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
              D +T  T+I   CK G + +A  + ++ME    VPS   F + + G     +  KV 
Sbjct: 476 CPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVN 535

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
            +  +M+A+ L  + ++  + +     +   +  C+  F 
Sbjct: 536 DIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFE 575



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 152/549 (27%), Positives = 262/549 (47%), Gaps = 39/549 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAF 136
           SP + ++T+L+    K  + +    + K +  N  +  D      LIN  C+ G    A 
Sbjct: 231 SPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDAN 290

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            V   ++ +    N   +N +ING C  GR+ E  +L +       + +  ++NTL++G 
Sbjct: 291 RVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGY 350

Query: 197 CRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           CR      A +  + MV N F        +TYN++++G C  G +D A +L   M  R +
Sbjct: 351 CRKGFMTKAFETCDMMVRNGFTGT----TLTYNTLLNGFCSRGAIDDALKLWFLMLKRGV 406

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PN I+ ++L+ GF      ++A  L+ E +  G+  +VVT N +IN  CK+ +M +   
Sbjct: 407 VPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEE 466

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA-- 373
           L   M +     D++TY +L+DG+C +G + RA ++ + M + G    V  +N  I    
Sbjct: 467 LFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLF 526

Query: 374 -NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
              +  KV D   +  EM ++ + P+ +TY  L++G  + GNL DA  L  +M    + P
Sbjct: 527 IAKQSGKVND---IRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKP 583

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQA------IRNC--------KCELRIET------- 471
           + F  +  +    + G V EA  V Q       I++C        K    IE+       
Sbjct: 584 NLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQ 643

Query: 472 -----YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
                +N +I GLCK+GR+  A  LF  L+ KG IPD  T S++IH     G +D A  L
Sbjct: 644 SAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGL 703

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
             +M +    P+ VT+ +L+ G  ++   S+ V L +K+ ++ +  + ++ ++ ++D   
Sbjct: 704 RDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNT-LIDGHC 762

Query: 587 KDKKYRECL 595
           KD    E  
Sbjct: 763 KDGNTTEAF 771


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 171/537 (31%), Positives = 254/537 (47%), Gaps = 41/537 (7%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN   + G +   + VY    M++ K  P + ++  ++    K    +       ++  
Sbjct: 189 LLNSLARFGLVDEMKQVYME--MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIM 168
            GL PD F    LI   C+      AF V   + L+ C   N V +  LI+GLC   RI 
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC-RRNEVAYTHLIHGLCVARRID 305

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           EA  LF K+    C P V T+  LI  LC +     AL L +EM  E G   KP++ TY 
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-EETGI--KPNIHTYT 362

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC------------------ 270
            +ID LC     +KA+ELL QM ++ + PNVITYN+LI G+C                  
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422

Query: 271 ----------------CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
                           C  +  +A  +  +M++  V PDVVT+N++I+  C+ G  D   
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           RLL LM  RG+ PD  TY S++D  C   R+  A +LF S+  KG   +V  Y  LI+  
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK  KV++A  +  +MLS+   P+ +T+N L+ GL   G L +A  L +KM    + P  
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T    I  L K+G    A   FQ + +   +    TY   I   C+ GRL  A  +  +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           ++  G  PD+ T S++I      GQ + A D+L  M    C PS+ TF +L++  ++
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 159/516 (30%), Positives = 256/516 (49%), Gaps = 29/516 (5%)

Query: 69  FDCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
            D  +KMK     P + ++T+L+  L  +++    ++L K +   G+ P++    +LI+ 
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           LC       A  +LG++L     PN +T+N LING C  G I +A  + + +      PN
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
             T+N LI G C++ N   A+ +  +M+        PDVVTYNS+IDG C+ G  D A  
Sbjct: 428 TRTYNELIKGYCKS-NVHKAMGVLNKMLER---KVLPDVVTYNSLIDGQCRSGNFDSAYR 483

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           LL  M DR + P+  TY S+I   C     +EA  LF  +   GV P+VV + A+I+  C
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           K GK+D+ + +LE M+ +   P+++T+N+L+ G C  G++  A  L   MV  G +  V 
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +  ILI+   KD   + A   +++MLS   +P   TY T +    + G L DA  ++ KM
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM--G 483
           + N V PD FT+++ I G    G    A  V + +R+  CE    T+  LI  L +M  G
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG 723

Query: 484 RLK----------------TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           + K                T  +L  ++      P+  +   +I  +C+ G +  A  + 
Sbjct: 724 KQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVF 783

Query: 528 LDMEAKNCV-PSEVTFCTLLR---GFVQNNKKSKVV 559
             M+    + PSE+ F  LL       ++N+ +KVV
Sbjct: 784 DHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/523 (29%), Positives = 252/523 (48%), Gaps = 45/523 (8%)

Query: 100 VVSLFKRLNSNGLFPDLFVL-----NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTF 154
           V+ L +++N +  F   + L     N L+N L + G+      V   +L     PN  T+
Sbjct: 162 VLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTY 221

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N ++NG C  G + EA +   K+     DP+  T+ +LI G C+ ++   A K+F EM  
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
           +    C+ + V Y  +I GLC    +D+A +L ++MKD    P V TY  LI   C  + 
Sbjct: 282 KG---CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
             EA  L  EM + G++P++ T+  +I+  C   K +K   LL  M+++G+ P+ +TYN+
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++G+C  G I  A ++   M S+    +  +YN LI   CK   V  A+ +  +ML  +
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERK 457

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           + P V+TYN+L+ G  + GN   A +L+  M    +VPD +T+ + ID LCK+  V EA 
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517

Query: 455 QVFQAIRN-----------------CKC------ELRIE------------TYNCLINGL 479
            +F ++                   CK        L +E            T+N LI+GL
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C  G+LK A  L  ++   G  P V T + +IH L K+G  D A      M +    P  
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
            T+ T ++ + +  +      ++ KM  E  V  DL   S ++
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKM-RENGVSPDLFTYSSLI 679



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 227/449 (50%), Gaps = 40/449 (8%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +NTL+N L R        +++ EM+ +   +C P++ TYN +++G CK G V++A + + 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLED--KVC-PNIYTYNKMVNGYCKLGNVEEANQYVS 242

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDW--------------------------------- 275
           ++ +  ++P+  TY SLI G+C   D                                  
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302

Query: 276 --KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
              EA  LF++M D+   P V T+  +I   C   +  +   L++ M + G+ P+  TY 
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            L+D  C   +  +AREL   M+ KG   +V +YN LIN  CK   +EDAV +   M S 
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
           ++ P+  TYN L+ G +   N+  A+ +++KM    V+PD  T+ + IDG C++G    A
Sbjct: 423 KLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
            ++   + +        TY  +I+ LCK  R++ AC LF  L+ KG  P+VV  + +I  
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
            CK G++D+A+ +L  M +KNC+P+ +TF  L+ G   + K  +  +L  KM    L  +
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +S  + ++  L KD  +    ++F+ +L
Sbjct: 602 -VSTDTILIHRLLKDGDFDHAYSRFQQML 629



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 213/502 (42%), Gaps = 64/502 (12%)

Query: 41  FKDGTSIAKFLNDRHKSGNI-TSNE------------AVYFFDCMIKMKPSPGMTSFTIL 87
            +D   + + +  R  S N  T NE            A+   + M++ K  P + ++  L
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSL 468

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           +    ++  +D+   L   +N  GL PD +    +I+ LCK      A  +   + +   
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            PN V +  LI+G C  G++ EA  + +K+    C PN +TFN LI+GLC       A  
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588

Query: 208 LFEEMV--------------------------------NEFGAICKPDVVTYNSIIDGLC 235
           L E+MV                                    +  KPD  TY + I   C
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           ++G +  A++++ +M++  ++P++ TY+SLI G+  +     A  +   M D G +P   
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708

Query: 296 TFNAMINY--NCKDGKM----------------DKVNRLLELMIQRGVNPDTVTYNSLMD 337
           TF ++I +    K GK                 D V  LLE M++  V P+  +Y  L+ 
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768

Query: 338 GFCLVGRISRARELFVSMV-SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           G C VG +  A ++F  M  ++G       +N L++  CK +K  +A  +  +M+     
Sbjct: 769 GICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL 828

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P + +   L+ GL++ G       +   +       D   +   IDG+ K G V    ++
Sbjct: 829 PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888

Query: 457 FQAIRNCKCELRIETYNCLING 478
           F  +    C+   +TY+ LI G
Sbjct: 889 FNVMEKNGCKFSSQTYSLLIEG 910


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 247/487 (50%), Gaps = 3/487 (0%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            ++A   +D M+         S  +L+  L   ++ +  + L +     G  P +   N+L
Sbjct: 1129 DDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVL 1188

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I+  C+ G      ++LG +    F P  VT+  LIN L  +G + +   LF ++     
Sbjct: 1189 IDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGF 1248

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             PNV  +N++I+ LC+ R+   A+ + ++M   F + C PD++T+N++I GLC +G V K
Sbjct: 1249 SPNVQIYNSVIDALCKCRSATQAMVILKQM---FASGCDPDIITFNTLITGLCHEGHVRK 1305

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            A+  L +   R +NPN ++Y  LI GFC   +   A  L +EMM  G  PDVVTF A+I+
Sbjct: 1306 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIH 1365

Query: 303  YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                 GK+ +   + E M +R V PD   YN L+ G C    +  A+ +   M+ K  + 
Sbjct: 1366 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQP 1425

Query: 363  DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            D + Y  LI+   + + + DA  ++  M  + I P +++ N ++ G  Q G + +A+  +
Sbjct: 1426 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCM 1485

Query: 423  DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
              M+    +PD FT+ T I G  K G +  A++    +   KC+  + TY+ LING CK 
Sbjct: 1486 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 1545

Query: 483  GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            G    A  LF  +Q +   P+VVT + +I  L K+ ++ +A      M   +C P++VT 
Sbjct: 1546 GDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 1605

Query: 543  CTLLRGF 549
              L+ G 
Sbjct: 1606 HYLVNGL 1612



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 228/439 (51%), Gaps = 3/439 (0%)

Query: 157  LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
            L+ GLC E R+ E  +L +      C P+VV +N LI+G CR  +    L L  EM  + 
Sbjct: 1153 LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETK- 1211

Query: 217  GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
            G +  P +VTY S+I+ L K G ++K   L L+M+ R  +PNV  YNS+I   C      
Sbjct: 1212 GFL--PTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSAT 1269

Query: 277  EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
            +A  +  +M  +G  PD++TFN +I   C +G + K    L   I+R +NP+ ++Y  L+
Sbjct: 1270 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 1329

Query: 337  DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
             GFC+ G +  A +L V M+ +G   DV ++  LI+      KV +A+ +  +M   ++ 
Sbjct: 1330 HGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 1389

Query: 397  PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
            P V  YN L+SGL +   L  A  ++++M   +V PD F +AT IDG  ++  + +A ++
Sbjct: 1390 PDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI 1449

Query: 457  FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
            F+ + +      I + N +I G C+ G +  A      ++  G IPD  T +T+I    K
Sbjct: 1450 FEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 1509

Query: 517  EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            +G ++ A   L DM  + C P+ VT+ +L+ G+ +         L   M AE L  + ++
Sbjct: 1510 QGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVT 1569

Query: 577  LSSKVVDLLSKDKKYRECL 595
             +  +  L  KDK  R  L
Sbjct: 1570 YTILIGSLFKKDKVLRAGL 1588



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 233/486 (47%), Gaps = 18/486 (3%)

Query: 79   PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
            P + ++  L+  L K    + + SLF  +   G  P++ + N +I+ LCK    + A V+
Sbjct: 1215 PTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVI 1274

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            L ++  S   P+ +TFN LI GLC EG + +A    ++      +PN +++  LI+G C 
Sbjct: 1275 LKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCM 1334

Query: 199  TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                +VA  L  EM+   G    PDVVT+ ++I GL   G V +A  +  +M +R + P+
Sbjct: 1335 RGELMVASDLLVEMM---GRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 1391

Query: 259  VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            V  YN LI G C       AK +  EM++  VQPD   +  +I+   +   +    ++ E
Sbjct: 1392 VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1451

Query: 319  LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
             M  +G+ PD V+ N+++ G+C  G +S A     +M   GC  D ++Y  +I+   K  
Sbjct: 1452 FMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1511

Query: 379  KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
             +  A+    +M+  + +P+V+TY++L++G  + G+   A  L   MQ   + P+  T+ 
Sbjct: 1512 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYT 1571

Query: 439  TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL--CKMGRLKTAC------- 489
              I  L K   VL A   F+ +    C     T + L+NGL  C    + + C       
Sbjct: 1572 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 1631

Query: 490  ------KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
                   +F +L      P     + +I  LC+   + +A D    M  K  VP+ +TF 
Sbjct: 1632 GKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 1691

Query: 544  TLLRGF 549
            +LL GF
Sbjct: 1692 SLLYGF 1697



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 194/442 (43%), Gaps = 39/442 (8%)

Query: 148  TPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P       L+      G + +A ++ +++   +   P V   N L+  L   R    A 
Sbjct: 1073 APTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDAR 1132

Query: 207  KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            KL++EM+   G     D  +   ++ GLC +  V++  +L+         P+V+ YN LI
Sbjct: 1133 KLYDEML---GKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLI 1189

Query: 267  CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
             G+C   D      L  EM   G  P +VT+ ++IN+  K G ++K+  L   M +RG +
Sbjct: 1190 DGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFS 1249

Query: 327  PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            P+   YNS++D  C     ++A  +   M + GC  D+ ++N LI   C +  V  A   
Sbjct: 1250 PNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHF 1309

Query: 387  YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             RE +   + P+ ++Y  L+ G    G L  A  L+ +M      PD  TF   I GL  
Sbjct: 1310 LREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVV 1369

Query: 447  NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC----------------- 489
             G V EA+ V + +   +    +  YN LI+GLCK   L  A                  
Sbjct: 1370 AGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFV 1429

Query: 490  ------------------KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
                              K+F  ++HKG  PD+V+C+ MI   C+ G M +A   + +M 
Sbjct: 1430 YATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 1489

Query: 532  AKNCVPSEVTFCTLLRGFVQNN 553
               C+P E T+ T++ G+ +  
Sbjct: 1490 KVGCIPDEFTYTTVISGYAKQG 1511



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 6/181 (3%)

Query: 393  ERIR------PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            ER+R      P V   N LL  L +     DA KL D+M   D   D+++    + GLC 
Sbjct: 1100 ERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCL 1159

Query: 447  NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
               V E +++ +A     C   +  YN LI+G C+ G +     L   ++ KG +P +VT
Sbjct: 1160 ERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVT 1219

Query: 507  CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              ++I+WL K+G ++K   L L+M  +   P+   + +++    +    ++ +V+L +M 
Sbjct: 1220 YGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMF 1279

Query: 567  A 567
            A
Sbjct: 1280 A 1280



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 28/224 (12%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            K GN+  N A+ +   MIK K  P + +++ L+    K    D    LF  + +  L P+
Sbjct: 1509 KQGNL--NGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPN 1566

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +    +LI  L K      A +    +L +  +PN VT ++L+NGL              
Sbjct: 1567 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLT------------- 1613

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
                 +C P V+  N++             L +F+++V + G    P    YN+II  LC
Sbjct: 1614 -----SCTPCVI--NSICCNTSEVHGKDALLVVFKKLVFDIG---DPRNSAYNAIIFSLC 1663

Query: 236  KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD---DWK 276
            +   + +A +   +M  +   PN IT+ SL+ GFC V    +W+
Sbjct: 1664 RHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWR 1707


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 248/487 (50%), Gaps = 3/487 (0%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            ++A   +D M+         S  +L+  L   ++ +  + L +     G  P +   N+L
Sbjct: 960  DDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVL 1019

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I+  C+ G      ++LG +  + F P  VT+  LIN L  +G + +   LF ++     
Sbjct: 1020 IDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGF 1079

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             PNV  +N++I+ LC  R+   A+ + ++M   F + C PD++T+N++I GLC +G V K
Sbjct: 1080 SPNVQIYNSVIDALCNCRSATQAMVILKQM---FASGCDPDIITFNTLITGLCHEGHVRK 1136

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            A+  L +   R +NPN ++Y  LI GFC   +   A  L +EMM  G  PDVVTF A+I+
Sbjct: 1137 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIH 1196

Query: 303  YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                 GK+ +   + E M +R V PD   YN L+ G C    +  A+ +   M+ K  + 
Sbjct: 1197 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQP 1256

Query: 363  DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            D + Y  LI+   + + + DA  ++  M  + + P +++ N ++ G  Q G + +A+  +
Sbjct: 1257 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCM 1316

Query: 423  DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
              M+    +PD FT+ T I G  K G +  A++    +   KC+  + TY+ LING CK 
Sbjct: 1317 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 1376

Query: 483  GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            G   +A  LF  +Q +   P+VVT + +I  L K+ ++ +A      M   +C P++VT 
Sbjct: 1377 GDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 1436

Query: 543  CTLLRGF 549
              L+ G 
Sbjct: 1437 HYLVNGL 1443



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 227/440 (51%), Gaps = 5/440 (1%)

Query: 157  LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM-VNE 215
            L+ GLC E R+ E  +L +      C P+VV +N LI+G CR  +    L L  EM  N 
Sbjct: 984  LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNG 1043

Query: 216  FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            F     P +VTY S+I+ L K G ++K   L L+M+ R  +PNV  YNS+I   C     
Sbjct: 1044 F----LPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSA 1099

Query: 276  KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
             +A  +  +M  +G  PD++TFN +I   C +G + K    L   I+R +NP+ ++Y  L
Sbjct: 1100 TQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPL 1159

Query: 336  MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
            + GFC+ G +  A +L V M+ +G   DV ++  LI+      KV +A+ +  +M   ++
Sbjct: 1160 IHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 1219

Query: 396  RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
             P V  YN L+SGL +   L  A  ++++M   +V PD F +AT IDG  ++  + +A +
Sbjct: 1220 FPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 1279

Query: 456  VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
            +F+ + +      I + N +I G C+ G +  A      ++  G IPD  T +T+I    
Sbjct: 1280 IFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYA 1339

Query: 516  KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
            K+G ++ A   L DM  + C P+ VT+ +L+ G+ +         L   M AE L  + +
Sbjct: 1340 KQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVV 1399

Query: 576  SLSSKVVDLLSKDKKYRECL 595
            + +  +  L  KDK  R  L
Sbjct: 1400 TYTILIGSLFKKDKVLRAGL 1419



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 232/486 (47%), Gaps = 18/486 (3%)

Query: 79   PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
            P + ++  L+  L K    + + SLF  +   G  P++ + N +I+ LC     + A V+
Sbjct: 1046 PTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVI 1105

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            L ++  S   P+ +TFN LI GLC EG + +A    ++      +PN +++  LI+G C 
Sbjct: 1106 LKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCM 1165

Query: 199  TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                +VA  L  EM+   G    PDVVT+ ++I GL   G V +A  +  +M +R + P+
Sbjct: 1166 RGELMVASDLLVEMM---GRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 1222

Query: 259  VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            V  YN LI G C       AK +  EM++  VQPD   +  +I+   +   +    ++ E
Sbjct: 1223 VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1282

Query: 319  LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
             M  +GV PD V+ N+++ G+C  G +S A     +M   GC  D ++Y  +I+   K  
Sbjct: 1283 FMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1342

Query: 379  KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
             +  A+    +M+  + +P+V+TY++L++G  + G+   A  L   MQ   + P+  T+ 
Sbjct: 1343 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYT 1402

Query: 439  TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL--CKMGRLKTAC------- 489
              I  L K   VL A   F+ +    C     T + L+NGL  C    + + C       
Sbjct: 1403 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 1462

Query: 490  ------KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
                   +F +L      P     + +I  LC+   + +A D    M  K  VP+ +TF 
Sbjct: 1463 GKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 1522

Query: 544  TLLRGF 549
            +LL GF
Sbjct: 1523 SLLYGF 1528



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 194/442 (43%), Gaps = 39/442 (8%)

Query: 148  TPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P       L+      G + +A  + +++   +   P V   N L+  L   R    A 
Sbjct: 904  APTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDAR 963

Query: 207  KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            KL++EM+   G     D  +   ++ GLC +  V++  +L+         P+V+ YN LI
Sbjct: 964  KLYDEML---GKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLI 1020

Query: 267  CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
             G+C   D      L  EM  NG  P +VT+ ++IN+  K G ++K+  L   M +RG +
Sbjct: 1021 DGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFS 1080

Query: 327  PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            P+   YNS++D  C     ++A  +   M + GC  D+ ++N LI   C +  V  A   
Sbjct: 1081 PNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHF 1140

Query: 387  YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             RE +   + P+ ++Y  L+ G    G L  A  L+ +M      PD  TF   I GL  
Sbjct: 1141 LREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVV 1200

Query: 447  NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC----------------- 489
             G V EA+ V + +   +    +  YN LI+GLCK   L  A                  
Sbjct: 1201 AGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFV 1260

Query: 490  ------------------KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
                              K+F  ++HKG  PD+V+C+ MI   C+ G M +A   + +M 
Sbjct: 1261 YATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 1320

Query: 532  AKNCVPSEVTFCTLLRGFVQNN 553
               C+P E T+ T++ G+ +  
Sbjct: 1321 KVGCIPDEFTYTTVISGYAKQG 1342



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 6/181 (3%)

Query: 393  ERIR------PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            ER+R      P V   N LL  L +     DA KL D+M   D   D+++    + GLC 
Sbjct: 931  ERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCL 990

Query: 447  NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
               V E +++ +A     C   +  YN LI+G C+ G +     L   ++  G +P +VT
Sbjct: 991  ERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVT 1050

Query: 507  CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              ++I+WL K+G ++K   L L+M  +   P+   + +++         ++ +V+L +M 
Sbjct: 1051 YGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMF 1110

Query: 567  A 567
            A
Sbjct: 1111 A 1111



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 21/232 (9%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +EA+     M K+   P   ++T +++  AK    +  +     +      P++   + L
Sbjct: 1310 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSL 1369

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            IN  CK G T  A  +   +     +PN VT+  LI  L  + +++ A   F+ + +  C
Sbjct: 1370 INGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHC 1429

Query: 183  DPNVVTFNTLINGL------------CRTRNTL---VALKLFEEMVNEFGAICKPDVVTY 227
             PN VT + L+NGL            C T         L +F+++V + G    P    Y
Sbjct: 1430 SPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG---DPRNSAY 1486

Query: 228  NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD---DWK 276
            N+II  LC+   + +A +   +M  +   PN IT+ SL+ GFC V    +W+
Sbjct: 1487 NAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWR 1538


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 149/488 (30%), Positives = 256/488 (52%), Gaps = 18/488 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +F++L+   ++    +  V  F  +      PDLF  NL+++ L +      A  V  ++
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L+    P+ VT+  LI+GLC   +  +A  LF ++      PN + ++ +++GLC+ +  
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL-LQMKDRNINPNVIT 261
             A +LF +M     + C  D++TYN +++G CK G++D A  LL L  KD +I   VI 
Sbjct: 250 FDAQRLFSKMR---ASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHI-LGVIG 305

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y  LI G      ++EA   + +M+   ++PDV+ +  MI    ++G++ +   LL  M 
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT 365

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           +RG+ PDT+ YN+L+ GFC +G +  A  L + +    C  + ++Y+ILI   CK+  + 
Sbjct: 366 ERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLIN 425

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL-------------N 428
            A  +++EM      PSV+T+N+L++GL +   L +A  L  +M++              
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGT 485

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
           D V D  +    ++ LC++G +L+A ++   + +      I TYN LING CK G +  A
Sbjct: 486 DKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGA 545

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            KLF  +Q KG +PD VT  T+I  L + G+ + A ++   M  K CVP   T+ T++  
Sbjct: 546 FKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTW 605

Query: 549 FVQNNKKS 556
             + N  S
Sbjct: 606 SCRENNIS 613



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 238/498 (47%), Gaps = 17/498 (3%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V +L+I  L K       + VL  +  S    ++  F+ LI      G   +A   F  +
Sbjct: 95  VQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLM 154

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
             F C P++  FN +++ L R    L+AL ++ +M+        PDVVTY  +I GLCK 
Sbjct: 155 RDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLK---CNLNPDVVTYGILIHGLCKT 211

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
                A  L  +M DR I PN I Y+ ++ G C      +A+ LF +M  +G   D++T+
Sbjct: 212 CKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITY 271

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N ++N  CK G +D    LL+L+ + G     + Y  L++G     R   A   +  M+ 
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +  + DV  Y I+I    ++ +V +A+ L  EM    +RP  I YN L+ G   +G L +
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A  L  ++  +D  P++ T++  I G+CKNG + +A  +F+ +    C   + T+N LIN
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLIN 451

Query: 478 GLCKMGRLKTACKLFHRL-------------QHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           GLCK  RL+ A  LF+++             Q    + D+ +   M+  LC+ G + KA 
Sbjct: 452 GLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAY 511

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            LL+ +     +P   T+  L+ GF +    +    L  +M  +  +   ++  + ++D 
Sbjct: 512 KLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGT-LIDG 570

Query: 585 LSKDKKYRECLNQFRHLL 602
           L +  +  + L  F  ++
Sbjct: 571 LYRAGRNEDALEIFEQMV 588



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 233/477 (48%), Gaps = 45/477 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +AV  F  M      P + +F ++L  L + + +   ++++ ++    L PD+    +L
Sbjct: 145 EKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGIL 204

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK   T  A V+   +      PN + ++ +++GLC   +I +A RLF K+    C
Sbjct: 205 IHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGC 264

Query: 183 DPNVVTFNTLINGLCRTR----------------------------NTLVALKLFEEMVN 214
           + +++T+N L+NG C++                             N L   + +EE   
Sbjct: 265 NRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHM 324

Query: 215 EFGAI----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
            +  +     KPDV+ Y  +I GL ++G V +A  LL +M +R + P+ I YN+LI GFC
Sbjct: 325 WYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFC 384

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            +    EA+ L +E+  +   P+  T++ +I   CK+G ++K   + + M + G  P  V
Sbjct: 385 DMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVV 444

Query: 331 TYNSLMDGFCLVGRISRARELFVSM-----------VSKGCRH--DVYSYNILINANCKD 377
           T+NSL++G C   R+  AR LF  M           +S+G     D+ S  +++   C+ 
Sbjct: 445 TFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCES 504

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             +  A  L  +++   + P + TYN L++G  + GN+  A KL  +MQL   +PDS T+
Sbjct: 505 GMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTY 564

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T IDGL + G   +A+++F+ +    C     TY  ++   C+   +  A  ++ +
Sbjct: 565 GTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMK 621



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 206/409 (50%), Gaps = 16/409 (3%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A+  FD M      P    ++I+L+ L + K+      LF ++ ++G   DL   N+
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N  CK G    AF +L  + +       + +  LINGL    R  EA   ++K+    
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V+ +  +I GL +      AL L  EM  E G   +PD + YN++I G C  G++D
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEM-TERG--LRPDTICYNALIKGFCDMGYLD 390

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A+ L L++   +  PN  TY+ LICG C      +A+ +F EM   G  P VVTFN++I
Sbjct: 391 EAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLI 450

Query: 302 NYNCKDGKMDKVNRL-----------LELMIQRGVNP--DTVTYNSLMDGFCLVGRISRA 348
           N  CK  ++++   L           L L + +G +   D  +   +M+  C  G I +A
Sbjct: 451 NGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            +L + +V  G   D+ +YNILIN  CK   +  A  L++EM  +   P  +TY TL+ G
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDG 570

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           L++ G   DAL++ ++M     VP+S T+ T +   C+   +  A+ V+
Sbjct: 571 LYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVW 619



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 235/531 (44%), Gaps = 73/531 (13%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA  ++  M++    P +  +TI++  L++  +    ++L   +   GL PD    N L
Sbjct: 320 EEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNAL 379

Query: 123 INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I   C MG    A  +   I +  CF PN  T++ LI G+C  G I +A  +FK++    
Sbjct: 380 IKGFCDMGYLDEAESLRLEISKHDCF-PNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP--------------DVVTY 227
           C P+VVTFN+LINGLC+      A  LF +M      + KP              D+ + 
Sbjct: 439 CLPSVVTFNSLINGLCKANRLEEARLLFYQM----EIVRKPSLFLRLSQGTDKVFDIASL 494

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
             +++ LC+ G + KA +LL+Q+ D  + P++ TYN LI GFC   +   A  LF EM  
Sbjct: 495 QVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQL 554

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G  PD VT+  +I+   + G+ +    + E M+++G  P++ TY ++M   C    IS 
Sbjct: 555 KGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISL 614

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A  +++  +                              +R    E++R        +++
Sbjct: 615 ALSVWMKYLRD----------------------------FRGWEDEKVR--------VVA 638

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
             F    L  A++ + +M +     D   +  ++ GL +     EA  +F  +++ K  +
Sbjct: 639 ESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNI 698

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKG--PIPDVVTCSTMIHWLCKEGQMDKAND 525
              +   LI  LC +  L  A  +F     +G   +P +  C+ +   LC    +D+ +D
Sbjct: 699 SSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPI--CNQL---LCNLLHLDRKDD 753

Query: 526 LLL---DMEAKNCVPSEVTFCTLLRGFVQN--NKKSKVVVLLHKMAAEKLV 571
            L     MEA     S    C  +    ++    +S + + LH++  ++LV
Sbjct: 754 ALFLANRMEA-----SGTELCIFIGANCKDIPTNESDLPMQLHRLQMQELV 799


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 256/512 (50%), Gaps = 44/512 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK-MGITSGAFV 137
           P + +   LL  L + K+ +    +++ +       D + + +++  LCK   +  G  +
Sbjct: 168 PDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKL 227

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  R  + C  PN V +N L++G    G +  A  LFK+L +    P   T+  +INGLC
Sbjct: 228 INDRWGKGCI-PNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLC 286

Query: 198 R---------------TRNTLVALKLFEEMVN---------EFGAI--------CKPDVV 225
           +                R   V ++++  +V+         E G          C+PD+ 
Sbjct: 287 KKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDIT 346

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC----- 280
           TYN++I G C+DG V +A+ELL     R ++PN ++Y  LI  +C     K+ KC     
Sbjct: 347 TYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYC-----KQGKCLRAFD 401

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LFI M + G   D+V + A+++     G++D    + + M++RGV PD   YN LM+G C
Sbjct: 402 LFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLC 461

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GR+S A+ L V M+ +    D +    L++   +  K+++A  L+   +++ + P V+
Sbjct: 462 KKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVV 521

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            YN ++ G  + G + DAL  + +M+  D  PD FT++T IDG  K   +  A+++F  +
Sbjct: 522 GYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQM 581

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
              KC+  + TY  LING C+ G    A K F  ++  G  P+VVT + +I   CKEG++
Sbjct: 582 VKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKI 641

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            KA      M    C+P++VTF  L+ G   N
Sbjct: 642 SKACSFFELMLLNRCIPNDVTFNYLINGLTNN 673



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 248/505 (49%), Gaps = 46/505 (9%)

Query: 113 FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
            PD+   N L+N L +      A  V   +++     +  +   ++ GLC E ++ E  +
Sbjct: 167 LPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRK 226

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           L        C PN+V +NTL++G  +  +   A  LF+E+  + G +  P   TY  +I+
Sbjct: 227 LINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMK-GFL--PTTETYGIMIN 283

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG----FCCVDDWKEAKCLFIEMMDN 288
           GLCK         LL++MK+R ++ NV  YNS++       C ++  K  + +     +N
Sbjct: 284 GLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWI----TEN 339

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G +PD+ T+N +I+ +C+DGK+ +   LLE  I+RG++P+ ++Y  L+  +C  G+  RA
Sbjct: 340 GCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRA 399

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            +LF+ M  KG   D+ +Y  L++      +V+ A+ +  +M+   + P    YN L++G
Sbjct: 400 FDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNG 459

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ---------- 458
           L + G L  A  L+ +M   ++  D+F  AT +DG  ++G + EA ++F+          
Sbjct: 460 LCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPG 519

Query: 459 ------AIRN-CK---------CELRIE---------TYNCLINGLCKMGRLKTACKLFH 493
                  I+  CK         C  R++         TY+ +I+G  K   L  A KLF 
Sbjct: 520 VVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFG 579

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           ++  +   P+VVT +++I+  C+ G   +A     +M +    P+ VT+  L+  F +  
Sbjct: 580 QMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEG 639

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLS 578
           K SK       M   + + +D++ +
Sbjct: 640 KISKACSFFELMLLNRCIPNDVTFN 664



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 214/430 (49%), Gaps = 17/430 (3%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
            + +  NG  PD+   N LI+  C+ G    A  +L   ++   +PN +++  LI+  C 
Sbjct: 333 LRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCK 392

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           +G+ + A  LF  +       ++V +  L++GL       VAL + ++MV E G +  PD
Sbjct: 393 QGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMV-ERGVL--PD 449

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
              YN +++GLCK G +  AK LL++M  +N++ +     +L+ GF       EAK LF 
Sbjct: 450 ANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFE 509

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
             +  G+ P VV +NAMI   CK G M+     ++ M     +PD  TY++++DG+    
Sbjct: 510 LTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQN 569

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            +  A +LF  MV + C+ +V +Y  LIN  C+      A   + EM S  ++P+V+TY 
Sbjct: 570 DLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYT 629

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL------EAVQV- 456
            L+    + G +  A    + M LN  +P+  TF   I+GL  N          E++++ 
Sbjct: 630 ILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIK 689

Query: 457 -------FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
                  F+ + +   E R+  YN ++  LC    +  A +L  ++  KG  PD V+ + 
Sbjct: 690 ASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAA 749

Query: 510 MIHWLCKEGQ 519
           +++ LC EG+
Sbjct: 750 LVYGLCLEGR 759



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 207/448 (46%), Gaps = 19/448 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    +  IK   SP   S+T L+ +  K  +      LF  +   G   DL     L
Sbjct: 362 HEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGAL 421

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ L   G    A  V  +++     P+   +N L+NGLC +GR+  A  L  ++     
Sbjct: 422 VHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNL 481

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +     TL++G  R      A KLFE  + +      P VV YN++I G CK G ++ 
Sbjct: 482 SLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKG---MDPGVVGYNAMIKGYCKFGMMND 538

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A   + +MKD + +P+  TY+++I G+   +D   A  LF +M+    +P+VVT+ ++IN
Sbjct: 539 ALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLIN 598

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ G   +  +  E M   G+ P+ VTY  L+  FC  G+IS+A   F  M+   C  
Sbjct: 599 GFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIP 658

Query: 363 DVYSYNILIN----------ANCKDQKVEDAVCL----YREMLSERIRPSVITYNTLLSG 408
           +  ++N LIN          +N  ++ +E    L    +R M+S+     V  YN++L  
Sbjct: 659 NDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLIC 718

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L     +  AL+L DKM    + PD  +FA  + GLC  G   E         N + EL+
Sbjct: 719 LCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTISCKLN-EWELQ 777

Query: 469 IET-YNCLINGLCKMGRLKTACKLFHRL 495
           I   Y+  +N     G    A K+FH L
Sbjct: 778 IAVKYSQKLNPFLPKGLTSEASKVFHTL 805



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 1/296 (0%)

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PDV+  NA++N   +  K++   ++ E M++R    D  +   ++ G C   ++   R+L
Sbjct: 168 PDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKL 227

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
                 KGC  ++  YN L++   K   VE A  L++E+  +   P+  TY  +++GL +
Sbjct: 228 INDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCK 287

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
             N      L+ +M+   V  +   + + +D   K+G  +E  +  + I    CE  I T
Sbjct: 288 KCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITT 347

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN LI+G C+ G++  A +L      +G  P+ ++ + +IH  CK+G+  +A DL + M 
Sbjct: 348 YNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMT 407

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            K      V +  L+ G V   +    + +  KM  E+ V+ D ++ + +++ L K
Sbjct: 408 EKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKM-VERGVLPDANVYNVLMNGLCK 462


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 262/509 (51%), Gaps = 7/509 (1%)

Query: 84  FTILLTMLA--KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           FT+ + + A  K  + +     F+     G+  D    +++I  +CK   ++    +L  
Sbjct: 261 FTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEE 320

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +    + P+  TF  +I    A+G ++EA RL +++       N+V   +L+ G C   N
Sbjct: 321 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 380

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              AL LF + + E G    P+ VTY+ +I+G C  G ++KA EL  QMK   I P+V  
Sbjct: 381 LDSALNLFNK-ITEDGLF--PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFN 437

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
            NSL+ G+     W+EA  LF E +D GV  ++ T+N M+++ CK GKMD+   LL+ M+
Sbjct: 438 VNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMV 496

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            +G+ P+ V+YN ++ G C  G +  A  +F  M+++  + +V +Y+ILI+ N K    E
Sbjct: 497 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 556

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A+ L+ +MLS  I P+  T+NT+++GL +VG + +A   +        +P   T+ + +
Sbjct: 557 KALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIV 616

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DG  K G +  A+ V++ +        + TY  LING CK  R+  A K    ++ KG  
Sbjct: 617 DGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE 676

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            DV   S +I   CK   M+ A DL  ++      P+ + + +++ GF   N     +V 
Sbjct: 677 LDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVW 736

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
             KM  ++ +  DL   + ++D L K+ +
Sbjct: 737 YKKMINDR-IPCDLGTYTTLIDGLLKEGR 764



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 154/499 (30%), Positives = 260/499 (52%), Gaps = 8/499 (1%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
            GN+ S  A+  F+ + +    P   ++++L+     +   +    L+ ++  NG+ P +
Sbjct: 378 QGNLDS--ALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 435

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           F +N L+    K  +   A  +    +  C   N  T+N +++ LC  G++ EA  L   
Sbjct: 436 FNVNSLLRGYLKAPLWEEASKLFDEAV-DCGVANIFTYNIMMSWLCKGGKMDEACSLLDN 494

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      PNVV++N +I G CR  N  +A  +F +M+       KP+VVTY+ +IDG  K
Sbjct: 495 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML---ARDLKPNVVTYSILIDGNFK 551

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G  +KA +L  QM   NI P   T+N++I G C V    EA+      ++ G  P  +T
Sbjct: 552 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 611

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N++++   K+G +D    +   M + GV+P+ VTY SL++GFC   RI  A +    M 
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KG   DV +Y+ LI+  CK + +E A  L+ E+L   + P+ I YN+++SG   + N+ 
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 731

Query: 417 DALKLIDKMQLNDVVP-DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            AL    KM +ND +P D  T+ T IDGL K G ++ A  ++  + +      I T++ L
Sbjct: 732 AALVWYKKM-INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 790

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           +NGLC  G+L+ A K+   +  K   P V+  +T+I    +EG + +A  L  +M  +  
Sbjct: 791 VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 850

Query: 536 VPSEVTFCTLLRGFVQNNK 554
           VP +VT+  L+ G  + ++
Sbjct: 851 VPDDVTYDILINGKFKGDR 869



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 270/550 (49%), Gaps = 39/550 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           SN  +   + M +    P   +FT ++            + L + + + G   +L V   
Sbjct: 311 SNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATS 370

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+   C  G    A  +  +I      PN VT++ LI G C  G I +A+ L+ ++ +  
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 430

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V   N+L+ G  +      A KLF+E V+   A    ++ TYN ++  LCK G +D
Sbjct: 431 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA----NIFTYNIMMSWLCKGGKMD 486

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  LL  M ++ + PNV++YN +I G C   +   A  +F +M+   ++P+VVT++ +I
Sbjct: 487 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILI 546

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           + N K G  +K   L + M+   + P   T+N++++G C VG++S AR+   + + +G  
Sbjct: 547 DGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFI 606

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
               +YN +++   K+  ++ A+ +YREM    + P+V+TY +L++G  +   +  ALK 
Sbjct: 607 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKT 666

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCK------------------------------NGFV- 450
            D+M+   +  D   ++  IDG CK                              +GF  
Sbjct: 667 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRD 726

Query: 451 ---LEAVQV-FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
              +EA  V ++ + N +    + TY  LI+GL K GRL  A  L+  +  KG +PD++T
Sbjct: 727 LNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIIT 786

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              +++ LC +GQ++ A  +L +M+ KN  PS + + TL+ G+ +     +   L  +M 
Sbjct: 787 FHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEML 846

Query: 567 AEKLVVSDLS 576
              LV  D++
Sbjct: 847 DRGLVPDDVT 856



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 197/356 (55%), Gaps = 5/356 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           + GN+    +V  F  M+     P + +++IL+    K    +  + LF ++ S  + P 
Sbjct: 516 RKGNMDMASSV--FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPT 573

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            F  N +IN LCK+G  S A   L   L   F P+ +T+N +++G   EG I  A  +++
Sbjct: 574 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYR 633

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++  F   PNVVT+ +LING C++    +ALK  +EM  E G   + DV  Y+++IDG C
Sbjct: 634 EMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM-REKG--LELDVTAYSALIDGFC 690

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   ++ A++L  ++ +  ++PN I YNS+I GF  +++ + A   + +M+++ +  D+ 
Sbjct: 691 KRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG 750

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+   K+G++   + L   M+ +G+ PD +T++ L++G C  G++  AR++   M
Sbjct: 751 TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 810

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
             K     V  YN LI    ++  +++A  L+ EML   + P  +TY+ L++G F+
Sbjct: 811 DRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 866



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/414 (21%), Positives = 188/414 (45%), Gaps = 35/414 (8%)

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D   +N +++   +   ++ A +    M  +++ P V   N L+      +   E + L+
Sbjct: 189 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 248

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M+  G+  D  T + M+    K+G++++         +RGV  D   Y+ ++   C  
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
              +   EL   M  +G      ++  +I A      + +A+ L  EM++     +++  
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 368

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR- 461
            +L+ G    GNL  AL L +K+  + + P+  T++  I+G C +G + +A +++  ++ 
Sbjct: 369 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 428

Query: 462 --------NCKCELR-------------------------IETYNCLINGLCKMGRLKTA 488
                   N    LR                         I TYN +++ LCK G++  A
Sbjct: 429 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEA 488

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           C L   + ++G +P+VV+ + MI   C++G MD A+ +  DM A++  P+ VT+  L+ G
Sbjct: 489 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 548

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             +     K + L  +M +  +  +D + ++ +++ L K  +  E  ++ ++ L
Sbjct: 549 NFKKGDSEKALDLFDQMLSLNIAPTDFTFNT-IINGLCKVGQMSEARDKLKNFL 601


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 153/507 (30%), Positives = 254/507 (50%), Gaps = 37/507 (7%)

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV---VLGRILRSCFTPNTVTFNF 156
              +F R+    L P+L   N LIN L +       ++   +   +++     NT TFN 
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE- 215
           LI G C E ++ EA  L  K+  F+C P+ V++NT+++ LC+      A  L  +M N  
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 277

Query: 216 -----------FGAICK--------------------PDVVTYNSIIDGLCKDGFVDKAK 244
                          CK                    PDV TYN +I GLCKDG +D+A 
Sbjct: 278 LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337

Query: 245 ELLLQMKDRNINPNVITYNSLICG-FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            L  +M++  + P+V+TYN+LI G F C    K  + L  +M   GV+P+ VT+N ++ +
Sbjct: 338 RLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFE-LIDKMEGKGVKPNAVTYNVVVKW 396

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K+GKMD     L  M + G +PD VT+N+L++G+C  GR+S A  +   M  KG + +
Sbjct: 397 YVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMN 456

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             + N +++  C ++K++DA  L             ++Y TL+ G F+ G   +A+KL D
Sbjct: 457 SVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWD 516

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+  +++P   T+ T I GLC +G   +++     +          TYN +I G C+ G
Sbjct: 517 EMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREG 576

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +++ A +  +++  K   PD+ TC+ ++  LC EG +DKA  L     +K      VT+ 
Sbjct: 577 QVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYN 636

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           T++ G  + ++  +   LL +M  +KL
Sbjct: 637 TIISGLCKEDRFEEAFDLLAEMEEKKL 663



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 263/526 (50%), Gaps = 8/526 (1%)

Query: 62  SNEAVYF----FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           S  +VY     F  +IK+       +F IL+       +    + L  ++     FPD  
Sbjct: 189 SKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNV 248

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N +++ LCK G  + A  +L  +  +   PN  TFN L++G C  G + EAA++   +
Sbjct: 249 SYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLM 308

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P+V T+N LI GLC+      A +L +EM N       PDVVTYN++I+G    
Sbjct: 309 AQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMEN---LKLLPDVVTYNTLINGCFDC 365

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
               K  EL+ +M+ + + PN +TYN ++  +        A     +M ++G  PD VTF
Sbjct: 366 SSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTF 425

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +IN  CK G++ +  R+++ M ++G+  ++VT N+++   C   ++  A +L  S   
Sbjct: 426 NTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK 485

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +G   D  SY  LI    KD K  +A+ L+ EM  + I PS+ITYNT++ GL   G    
Sbjct: 486 RGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQ 545

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           ++  ++++  + +VPD  T+ T I G C+ G V +A Q    +     +  + T N L+ 
Sbjct: 546 SIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLR 605

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           GLC  G L  A KLF+    KG   D VT +T+I  LCKE + ++A DLL +ME K   P
Sbjct: 606 GLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGP 665

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE-KLVVSDLSLSSKVV 582
              T+  +L       +  +    + ++  + KL    +SL+ + +
Sbjct: 666 DCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKI 711



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 247/547 (45%), Gaps = 55/547 (10%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+     M      P   S+  +L +L K  + +    L   + +NGL P+    N+L
Sbjct: 229 SEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNIL 288

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK+G    A  V+  + ++   P+  T+N LI GLC +G+I EA RL  ++     
Sbjct: 289 VSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKL 348

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAICK------------- 221
            P+VVT+NTLING     ++L   +L ++M  +        +  + K             
Sbjct: 349 LPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGN 408

Query: 222 -----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                      PD VT+N++I+G CK G + +A  ++ +M  + +  N +T N+++   C
Sbjct: 409 ELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 468

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                 +A  L       G   D V++  +I    KDGK  +  +L + M ++ + P  +
Sbjct: 469 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSII 528

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TYN+++ G C  G+  ++ +    ++  G   D  +YN +I   C++ +VE A   + +M
Sbjct: 529 TYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKM 588

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           + +  +P + T N LL GL   G L  ALKL +         D+ T+ T I GLCK    
Sbjct: 589 VKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRF 648

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI--------- 501
            EA  +   +   K      TYN +++ L   GR+K A +   R+  +G +         
Sbjct: 649 EEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNK 708

Query: 502 --------------PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
                         P+ VT S  I+ LC +G+   A  ++ +   K     + T+ +L+ 
Sbjct: 709 RKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLME 768

Query: 548 GFVQNNK 554
           G ++  K
Sbjct: 769 GLIKRRK 775



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 223/449 (49%), Gaps = 35/449 (7%)

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR------------- 198
           V  +  I    A  R   AA++F ++      PN++T NTLIN L R             
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 199 --------------TRNTLVALKLFEEMVNE-FGAI-------CKPDVVTYNSIIDGLCK 236
                         T N L+     E  ++E  G I       C PD V+YN+I+D LCK
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G +++A++LLL MK+  + PN  T+N L+ G+C +   KEA  +   M  N V PDV T
Sbjct: 260 KGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWT 319

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I   CKDGK+D+  RL + M    + PD VTYN+L++G        +  EL   M 
Sbjct: 320 YNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKME 379

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KG + +  +YN+++    K+ K+++A    R+M      P  +T+NTL++G  + G L 
Sbjct: 380 GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLS 439

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +++D+M    +  +S T  T +  LC    + +A ++  +       +   +Y  LI
Sbjct: 440 EAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLI 499

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            G  K G+   A KL+  ++ K  IP ++T +TMI  LC  G+ D++ D L ++     V
Sbjct: 500 MGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLV 559

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           P E T+ T++ G+ +  +  K     +KM
Sbjct: 560 PDETTYNTIILGYCREGQVEKAFQFHNKM 588



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 169/323 (52%), Gaps = 3/323 (0%)

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV---NRL 316
           +  ++ I  +   +    A  +F  M    ++P+++T N +IN   +      V     +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              +I+ GV  +T T+N L+ G C+  ++S A  L   M    C  D  SYN +++  CK
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             K+ +A  L  +M +  + P+  T+N L+SG  ++G L +A ++ID M  N+V+PD +T
Sbjct: 260 KGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWT 319

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   I GLCK+G + EA ++   + N K    + TYN LING           +L  +++
Sbjct: 320 YNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKME 379

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG  P+ VT + ++ W  KEG+MD A + L  ME     P  VTF TL+ G+ +  + S
Sbjct: 380 GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLS 439

Query: 557 KVVVLLHKMAAEKLVVSDLSLSS 579
           +   ++ +M+ + L ++ ++L++
Sbjct: 440 EAFRMMDEMSRKGLKMNSVTLNT 462



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 165/403 (40%), Gaps = 96/403 (23%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++ +++    K  + D   +  +++  +G  PD    N LIN  CK G  S AF +
Sbjct: 385 PNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRM 444

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAE---------------------------------- 164
           +  + R     N+VT N +++ LC E                                  
Sbjct: 445 MDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK 504

Query: 165 -GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
            G+ +EA +L+ ++      P+++T+NT+I GLC +  T  ++    E++ E G +  PD
Sbjct: 505 DGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELL-ESGLV--PD 561

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV------------------------ 259
             TYN+II G C++G V+KA +   +M  ++  P++                        
Sbjct: 562 ETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFN 621

Query: 260 -----------ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
                      +TYN++I G C  D ++EA  L  EM +  + PD  T+NA+++     G
Sbjct: 622 TWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAG 681

Query: 309 KMDKVNRLLELMIQRG-----------------------VNPDTVTYNSLMDGFCLVGRI 345
           +M +    +  ++++G                        +P++VT++  ++  C  G+ 
Sbjct: 682 RMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKY 741

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
             A  +      KG      +Y  L+    K +K     CL R
Sbjct: 742 KDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKSISRSCLSR 784


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 149/534 (27%), Positives = 265/534 (49%), Gaps = 38/534 (7%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG------ 130
           P+P + +F  L+    K  + D    LFK +   G+ PDL   + LI+   K G      
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341

Query: 131 -------------------------ITSG----AFVVLGRILRSCFTPNTVTFNFLINGL 161
                                    + SG    A VV  R+L    +PN VT+  LI GL
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C +GRI EA  ++ ++     +P++VT+++LI+G C+  N      L+E+M+ + G    
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI-KMGY--P 458

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PDVV Y  ++DGL K G +  A    ++M  ++I  NV+ +NSLI G+C ++ + EA  +
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           F  M   G++PDV TF  ++  +  +G++++   L   M + G+ PD + Y +L+D FC 
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             + +   +LF  M       D+   N++I+   K  ++EDA   +  ++  ++ P ++T
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YNT++ G   +  L +A ++ + +++    P++ T    I  LCKN  +  A+++F  + 
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +    TY CL++   K   ++ + KLF  +Q KG  P +V+ S +I  LCK G++D
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           +A ++         +P  V +  L+RG+ +  +  +  +L   M    +   DL
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 248/533 (46%), Gaps = 18/533 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSN--------GLFPDLF----VLNLLINCLCKMG 130
           SF  +  +L +N  +D    +F  + +N        G   D      V   L+ C C+ G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 131 ITSGAF-VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           +   A  + +         P    +  L N L    R+   A  F KL     +P+ V+ 
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVSA 219

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           +  +      +  +     F  +V E G   +  +V+ N ++ GL  D  ++ A  LL  
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERG--FRVGIVSCNKVLKGLSVDQ-IEVASRLLSL 276

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           + D    PNV+T+ +LI GFC   +   A  LF  M   G++PD++ ++ +I+   K G 
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +   ++L    + +GV  D V ++S +D +   G ++ A  ++  M+ +G   +V +Y I
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI   C+D ++ +A  +Y ++L   + PS++TY++L+ G  + GNL     L + M    
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
             PD   +   +DGL K G +L A++    +      L +  +N LI+G C++ R   A 
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           K+F  +   G  PDV T +T++     EG++++A  L   M      P  + +CTL+  F
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            ++ K +  + L   M   K + +D+++ + V+ LL K  +  +    F +L+
Sbjct: 577 CKHMKPTIGLQLFDLMQRNK-ISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 173/374 (46%), Gaps = 34/374 (9%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+ S  A+Y  + MIKM   P +  + +L+  L+K       +    ++    +  +
Sbjct: 438 KCGNLRSGFALY--EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           + V N LI+  C++     A  V   +      P+  TF  ++     EGR+ EA  LF 
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM----VNEFGAIC----------- 220
           ++     +P+ + + TLI+  C+     + L+LF+ M    ++   A+C           
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 615

Query: 221 -----------------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
                            +PD+VTYN++I G C    +D+A+ +   +K     PN +T  
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 675

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            LI   C  +D   A  +F  M + G +P+ VT+  ++++  K   ++   +L E M ++
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G++P  V+Y+ ++DG C  GR+  A  +F   +      DV +Y ILI   CK  ++ +A
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795

Query: 384 VCLYREMLSERIRP 397
             LY  ML   ++P
Sbjct: 796 ALLYEHMLRNGVKP 809



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 3/273 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA++ F  M KM   P   ++  L+    K+ +    + LF  +  N +  D+ V N++
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K      A      ++     P+ VT+N +I G C+  R+ EA R+F+ L V   
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VT   LI+ LC+  +   A+++F  M  E G+  KP+ VTY  ++D   K   ++ 
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EKGS--KPNAVTYGCLMDWFSKSVDIEG 724

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           + +L  +M+++ I+P++++Y+ +I G C      EA  +F + +D  + PDVV +  +I 
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
             CK G++ +   L E M++ GV PD +   +L
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/448 (32%), Positives = 236/448 (52%), Gaps = 5/448 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +F+IL+  L K        SL +   +NG   D+     +++ L K      A  ++ +I
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
             +  TP   T+N L+NGLC  GR+ EA  L +K+    C P+VVT+ +LI+GL + + +
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A KLF+EM +   A+   D V Y ++I GL + G + +A  +   M  +   P+V+T 
Sbjct: 121 FEAYKLFKEMASRGLAL---DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 177

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           +++I G C       A  +F  M   G+ P+ V ++A+I+  CK  KMD    +L  M +
Sbjct: 178 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 237

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
               PDT+TYN L+DG C  G ++ AR  F  M+  GC+ DVY+YNILI+  CK    + 
Sbjct: 238 AFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA 297

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  ++ +M S R  P+V+TY TL+SGL +   L  A      M+     PDSF +++ +D
Sbjct: 298 ACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVD 357

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK+G +     +F  +         +T   LI  LCK  R+  A  LF+ ++ +G +P
Sbjct: 358 GLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MP 415

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDM 530
                +++I  L K G++++   +  +M
Sbjct: 416 HPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 217/411 (52%), Gaps = 5/411 (1%)

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           TF+ LINGL +    + A  L +E        C  D+ TY +I+D L K+  + +A  L+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNG---CTIDIHTYTTIVDWLAKNKKIQEAVALM 57

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            ++      P + TYN+L+ G C +   +EA  L  +++DNG  PDVVT+ ++I+   K 
Sbjct: 58  EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKK 117

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            +  +  +L + M  RG+  DTV Y +L+ G    G+I +A  ++ +M S+GC  DV + 
Sbjct: 118 KRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 177

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           + +I+  CK  ++  AV +++ M +  + P+ + Y+ L+ GL +   +  AL+++ +M+ 
Sbjct: 178 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 237

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
               PD+ T+   IDGLCK+G V  A   F  +    C+  + TYN LI+G CK G    
Sbjct: 238 AFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA 297

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           AC +F  +      P+VVT  T+I  LCK  Q+ KA+     M+ + C P    + +L+ 
Sbjct: 298 ACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVD 357

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           G  ++ K     +L  +M  E+  V++    ++++  L K  +  E ++ F
Sbjct: 358 GLCKSGKLEGGCMLFDEM--ERSGVANSQTRTRLIFHLCKANRVDEAVSLF 406



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 187/376 (49%), Gaps = 7/376 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN   K G +   EA+     ++    +P + ++T L+  L K K+      LFK + S
Sbjct: 75  LLNGLCKMGRL--EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMAS 132

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            GL  D      LI  L + G    A  V   +      P+ VT + +I+GLC  GRI  
Sbjct: 133 RGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGA 192

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A R+FK +      PN V ++ LI+GLC+ R    AL++  +M   F   C PD +TYN 
Sbjct: 193 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF---CTPDTITYNI 249

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +IDGLCK G V  A+    +M +    P+V TYN LI GFC   +   A  +F +M  + 
Sbjct: 250 LIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR 309

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             P+VVT+  +I+  CK  ++ K +   + M +RG  PD+  Y+SL+DG C  G++    
Sbjct: 310 CSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC 369

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            LF  M   G  +      ++ +  CK  +V++AV L+  +  E + P    YN+++S L
Sbjct: 370 MLFDEMERSGVANSQTRTRLIFHL-CKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISAL 427

Query: 410 FQVGNLGDALKLIDKM 425
            + G + +   +  +M
Sbjct: 428 IKSGKVNEGQAVYQEM 443


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 262/509 (51%), Gaps = 7/509 (1%)

Query: 84  FTILLTMLA--KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           FT+ + + A  K  + +     F+     G+  D    +++I  +CK   ++    +L  
Sbjct: 221 FTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEE 280

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +    + P+  TF  +I    A+G ++EA RL +++       N+V   +L+ G C   N
Sbjct: 281 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 340

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              AL LF + + E G    P+ VTY+ +I+G C  G ++KA EL  QMK   I P+V  
Sbjct: 341 LDSALNLFNK-ITEDGLF--PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFN 397

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
            NSL+ G+     W+EA  LF E +D GV  ++ T+N M+++ CK GKMD+   LL+ M+
Sbjct: 398 VNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMV 456

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            +G+ P+ V+YN ++ G C  G +  A  +F  M+++  + +V +Y+ILI+ N K    E
Sbjct: 457 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 516

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A+ L+ +MLS  I P+  T+NT+++GL +VG + +A   +        +P   T+ + +
Sbjct: 517 KALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIV 576

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DG  K G +  A+ V++ +        + TY  LING CK  R+  A K    ++ KG  
Sbjct: 577 DGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE 636

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            DV   S +I   CK   M+ A DL  ++      P+ + + +++ GF   N     +V 
Sbjct: 637 LDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVW 696

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
             KM  ++ +  DL   + ++D L K+ +
Sbjct: 697 YKKMINDR-IPCDLGTYTTLIDGLLKEGR 724



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 154/499 (30%), Positives = 260/499 (52%), Gaps = 8/499 (1%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
            GN+ S  A+  F+ + +    P   ++++L+     +   +    L+ ++  NG+ P +
Sbjct: 338 QGNLDS--ALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 395

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           F +N L+    K  +   A  +    +  C   N  T+N +++ LC  G++ EA  L   
Sbjct: 396 FNVNSLLRGYLKAPLWEEASKLFDEAV-DCGVANIFTYNIMMSWLCKGGKMDEACSLLDN 454

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      PNVV++N +I G CR  N  +A  +F +M+       KP+VVTY+ +IDG  K
Sbjct: 455 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML---ARDLKPNVVTYSILIDGNFK 511

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G  +KA +L  QM   NI P   T+N++I G C V    EA+      ++ G  P  +T
Sbjct: 512 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 571

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N++++   K+G +D    +   M + GV+P+ VTY SL++GFC   RI  A +    M 
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KG   DV +Y+ LI+  CK + +E A  L+ E+L   + P+ I YN+++SG   + N+ 
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 691

Query: 417 DALKLIDKMQLNDVVP-DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            AL    KM +ND +P D  T+ T IDGL K G ++ A  ++  + +      I T++ L
Sbjct: 692 AALVWYKKM-INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 750

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           +NGLC  G+L+ A K+   +  K   P V+  +T+I    +EG + +A  L  +M  +  
Sbjct: 751 VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 810

Query: 536 VPSEVTFCTLLRGFVQNNK 554
           VP +VT+  L+ G  + ++
Sbjct: 811 VPDDVTYDILINGKFKGDR 829



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 270/551 (49%), Gaps = 41/551 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           SN  +   + M +    P   +FT ++            + L + + + G   +L V   
Sbjct: 271 SNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATS 330

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+   C  G    A  +  +I      PN VT++ LI G C  G I +A+ L+ ++ +  
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 390

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK-PDVVTYNSIIDGLCKDGFV 240
             P+V   N+L+ G  +      A KLF+E V+     C   ++ TYN ++  LCK G +
Sbjct: 391 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVD-----CGVANIFTYNIMMSWLCKGGKM 445

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D+A  LL  M ++ + PNV++YN +I G C   +   A  +F +M+   ++P+VVT++ +
Sbjct: 446 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 505

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+ N K G  +K   L + M+   + P   T+N++++G C VG++S AR+   + + +G 
Sbjct: 506 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 565

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
                +YN +++   K+  ++ A+ +YREM    + P+V+TY +L++G  +   +  ALK
Sbjct: 566 IPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 625

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCK------------------------------NGFV 450
             D+M+   +  D   ++  IDG CK                              +GF 
Sbjct: 626 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 685

Query: 451 ----LEAVQV-FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
               +EA  V ++ + N +    + TY  LI+GL K GRL  A  L+  +  KG +PD++
Sbjct: 686 DLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 745

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T   +++ LC +GQ++ A  +L +M+ KN  PS + + TL+ G+ +     +   L  +M
Sbjct: 746 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 805

Query: 566 AAEKLVVSDLS 576
               LV  D++
Sbjct: 806 LDRGLVPDDVT 816



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 197/356 (55%), Gaps = 5/356 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           + GN+    +V  F  M+     P + +++IL+    K    +  + LF ++ S  + P 
Sbjct: 476 RKGNMDMASSV--FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPT 533

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            F  N +IN LCK+G  S A   L   L   F P+ +T+N +++G   EG I  A  +++
Sbjct: 534 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYR 593

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++  F   PNVVT+ +LING C++    +ALK  +EM  E G   + DV  Y+++IDG C
Sbjct: 594 EMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM-REKG--LELDVTAYSALIDGFC 650

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   ++ A++L  ++ +  ++PN I YNS+I GF  +++ + A   + +M+++ +  D+ 
Sbjct: 651 KRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG 710

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+   K+G++   + L   M+ +G+ PD +T++ L++G C  G++  AR++   M
Sbjct: 711 TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 770

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
             K     V  YN LI    ++  +++A  L+ EML   + P  +TY+ L++G F+
Sbjct: 771 DRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 826



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/414 (21%), Positives = 188/414 (45%), Gaps = 35/414 (8%)

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D   +N +++   +   ++ A +    M  +++ P V   N L+      +   E + L+
Sbjct: 149 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 208

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M+  G+  D  T + M+    K+G++++         +RGV  D   Y+ ++   C  
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 268

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
              +   EL   M  +G      ++  +I A      + +A+ L  EM++     +++  
Sbjct: 269 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 328

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR- 461
            +L+ G    GNL  AL L +K+  + + P+  T++  I+G C +G + +A +++  ++ 
Sbjct: 329 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 388

Query: 462 --------NCKCELR-------------------------IETYNCLINGLCKMGRLKTA 488
                   N    LR                         I TYN +++ LCK G++  A
Sbjct: 389 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEA 448

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           C L   + ++G +P+VV+ + MI   C++G MD A+ +  DM A++  P+ VT+  L+ G
Sbjct: 449 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 508

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             +     K + L  +M +  +  +D + ++ +++ L K  +  E  ++ ++ L
Sbjct: 509 NFKKGDSEKALDLFDQMLSLNIAPTDFTFNT-IINGLCKVGQMSEARDKLKNFL 561


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 156/523 (29%), Positives = 271/523 (51%), Gaps = 14/523 (2%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK----MGITSGAFVVL 139
           F I   +L +    D    LF ++ + GL   +   NL I+ L +    + I    FV  
Sbjct: 185 FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEF 244

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             +   C+  NT ++N + + LC  GR++EA +L  ++ +  C P+V++++T+ING C+ 
Sbjct: 245 PEV-GVCW--NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQV 301

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                 LKL EEM  +   + KP+  TYN +I  LCK G V +A+ +L +M    I P+ 
Sbjct: 302 GELQRVLKLIEEM--QIKGL-KPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDG 358

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           + Y +LI GFC + +   A  LF EM    + PD +T+ A+I   C+ G++ + ++L   
Sbjct: 359 VIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHE 418

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M+ + + PD VTY +L+DG+C  G++  A  L   M+  G   ++ +Y  L +  CK  +
Sbjct: 419 MVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 478

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           V+ A  L  EM  + +  ++ TYN+L++GL + GN+  A+KL+  M++    PD+ T+ T
Sbjct: 479 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 538

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +D  CK+  ++ A ++ + + + + +  + T+N L+NG C  G L+   KL   +  KG
Sbjct: 539 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 598

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            +P+  T +++I   C    M    ++   M AK  VP   T+  L++G  +  +  K  
Sbjct: 599 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK-ARNMKEA 657

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY---RECLNQFR 599
             LH+    K     +S  + ++    K KK+   RE   Q R
Sbjct: 658 WFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMR 700



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 256/512 (50%), Gaps = 6/512 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKN-KQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +EA   FD M+       + S  + ++ L+++       + +F      G+  +    N+
Sbjct: 199 DEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNI 258

Query: 122 LINCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           + + LC++G +     ++L   LR C  P+ ++++ +ING C  G +    +L +++ + 
Sbjct: 259 ITHSLCQLGRVVEAHQLLLQMELRGCI-PDVISYSTVINGYCQVGELQRVLKLIEEMQIK 317

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              PN  T+N +I  LC+T     A ++  EM++E  A   PD V Y ++IDG CK G V
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA---PDGVIYTTLIDGFCKLGNV 374

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
             A  L  +M+ R I+P+ ITY ++ICG C      EA  LF EM+   ++PD VT+ A+
Sbjct: 375 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 434

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  CK+GKM +   L   M+Q G+ P+ VTY +L DG C  G +  A EL   M  KG 
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             ++Y+YN L+N  CK   ++ AV L ++M      P  +TY TL+    +   +  A +
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 554

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L+ +M   ++ P   TF   ++G C +G + +  ++ + +          TYN LI   C
Sbjct: 555 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 614

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
               ++   +++  +  KG +PD  T + +I   CK   M +A  L  DM  K    +  
Sbjct: 615 IRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVS 674

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
           ++  L++GF +  K  +   L  +M  E LV 
Sbjct: 675 SYNALIKGFYKRKKFLEARELFEQMRREGLVA 706



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/434 (33%), Positives = 229/434 (52%), Gaps = 4/434 (0%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            + +  +N    +G++ G FV         +  +   F+     L   G + EA +LF K
Sbjct: 148 LIQDFWVNPNLDVGVSFGHFVEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDK 207

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTL-VALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +  +    +V + N  I+ L    + + +ALK+F E   E G +C  +  +YN I   LC
Sbjct: 208 MLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEF-PEVG-VCW-NTASYNIITHSLC 264

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           + G V +A +LLLQM+ R   P+VI+Y+++I G+C V + +    L  EM   G++P+  
Sbjct: 265 QLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPY 324

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I   CK GK+ +  R+L  MI  G+ PD V Y +L+DGFC +G +S A  LF  M
Sbjct: 325 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 384

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +    D  +Y  +I   C+  +V +A  L+ EM+ +R+ P  +TY  L+ G  + G +
Sbjct: 385 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 444

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A  L ++M    + P+  T+    DGLCK G V  A ++   +     EL I TYN L
Sbjct: 445 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 504

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           +NGLCK G +  A KL   ++  G  PD VT +T++   CK  +M +A++LL  M  +  
Sbjct: 505 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 564

Query: 536 VPSEVTFCTLLRGF 549
            P+ VTF  L+ GF
Sbjct: 565 QPTVVTFNVLMNGF 578



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 226/446 (50%), Gaps = 9/446 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S++ ++    +  +   V+ L + +   GL P+ +  N +I  LCK G  + A  V
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 345

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  ++     P+ V +  LI+G C  G +  A RLF ++      P+ +T+  +I GLC+
Sbjct: 346 LREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQ 405

Query: 199 TRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           T   + A KLF EMV      CK   PD VTY ++IDG CK+G + +A  L  QM    +
Sbjct: 406 TGRVMEADKLFHEMV------CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 459

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PN++TY +L  G C   +   A  L  EM   G++ ++ T+N+++N  CK G +D+  +
Sbjct: 460 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 519

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L++ M   G +PD VTY +LMD +C    + RA EL   M+ +  +  V ++N+L+N  C
Sbjct: 520 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 579

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
               +ED   L + ML + I P+  TYN+L+       N+    ++   M    VVPD  
Sbjct: 580 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 639

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+   I G CK   + EA  + + +      L + +YN LI G  K  +   A +LF ++
Sbjct: 640 TYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM 699

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMD 521
           + +G + D    +        EG+M+
Sbjct: 700 RREGLVADREIYNIFADINYDEGKME 725



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 209/400 (52%), Gaps = 34/400 (8%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           +KP+P   +  ILL  L K  +      + + + S G+ PD  +   LI+  CK+G  S 
Sbjct: 319 LKPNPYTYNGVILL--LCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 376

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A+ +   + +   +P+ +T+  +I GLC  GR+MEA +LF ++     +P+ VT+  LI+
Sbjct: 377 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 436

Query: 195 GLCRTRNTLVALKLFEEMV---------------------------NEF-GAICKP---- 222
           G C+      A  L  +M+                           NE    +C+     
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 496

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           ++ TYNS+++GLCK G +D+A +L+  M+    +P+ +TY +L+  +C   +   A  L 
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M+D  +QP VVTFN ++N  C  G ++   +LL+ M+++G+ P+  TYNSL+  +C+ 
Sbjct: 557 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 616

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             +    E++  M +KG   D  +YNILI  +CK + +++A  L+R+M+ +    +V +Y
Sbjct: 617 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 676

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           N L+ G ++     +A +L ++M+   +V D   +  + D
Sbjct: 677 NALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 185/382 (48%), Gaps = 5/382 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG      ++   K GN++S  A   FD M K K SP   ++T ++  L +  +      
Sbjct: 357 DGVIYTTLIDGFCKLGNVSS--AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 414

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF  +    L PD      LI+  CK G    AF +  ++L+   TPN VT+  L +GLC
Sbjct: 415 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 474

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G +  A  L  ++     + N+ T+N+L+NGLC+  N   A+KL ++M  E      P
Sbjct: 475 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM--EVAGF-HP 531

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D VTY +++D  CK   + +A ELL QM DR + P V+T+N L+ GFC     ++ + L 
Sbjct: 532 DAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLL 591

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M++ G+ P+  T+N++I   C    M     +   M  +GV PD  TYN L+ G C  
Sbjct: 592 KWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKA 651

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             +  A  L   MV KG    V SYN LI    K +K  +A  L+ +M  E +      Y
Sbjct: 652 RNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 711

Query: 403 NTLLSGLFQVGNLGDALKLIDK 424
           N      +  G +   L+L D+
Sbjct: 712 NIFADINYDEGKMELTLELCDE 733



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 3/341 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F  M+  +  P   ++T L+    K  +     SL  ++   GL P++     L 
Sbjct: 411 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 470

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G    A  +L  + R     N  T+N L+NGLC  G I +A +L K + V    
Sbjct: 471 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 530

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++  C++R  + A +L  +M++      +P VVT+N +++G C  G ++  
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDR---ELQPTVVTFNVLMNGFCMSGMLEDG 587

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           ++LL  M ++ I PN  TYNSLI  +C  ++ +    ++  M   GV PD  T+N +I  
Sbjct: 588 EKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG 647

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           +CK   M +   L   M+ +G N    +YN+L+ GF    +   ARELF  M  +G   D
Sbjct: 648 HCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVAD 707

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
              YNI  + N  + K+E  + L  E + + +   + T NT
Sbjct: 708 REIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 261/506 (51%), Gaps = 10/506 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           ++ Y    M K   +P + ++  +L    K  ++   + L   + S G+  D+   N+LI
Sbjct: 211 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 270

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC+    +  +++L  + +    PN VT+N LING   EG+++ A++L  ++  F   
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VTFN LI+G     N   ALK+F  M  +      P  V+Y  ++DGLCK+   D A
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKG---LTPSEVSYGVLLDGLCKNAEFDLA 387

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +   ++MK   +    ITY  +I G C      EA  L  EM  +G+ PD+VT++A+IN 
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+      ++  + + G++P+ + Y++L+   C +G +  A  ++ +M+ +G   D
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK--- 420
            +++N+L+ + CK  KV +A    R M S+ I P+ ++++ L++G    GN G+ LK   
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING---YGNSGEGLKAFS 564

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           + D+M      P  FT+ + + GLCK G + EA +  +++      +    YN L+  +C
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK-NCVPSE 539
           K G L  A  LF  +  +  +PD  T +++I  LC++G+   A     + EA+ N +P++
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKM 565
           V +   + G  +  +    +    +M
Sbjct: 685 VMYTCFVDGMFKAGQWKAGIYFREQM 710



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 263/525 (50%), Gaps = 3/525 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F   M+K K  P + +F IL+ +L     ++    L +++  +G  P +   N +++  C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    A  +L  +       +  T+N LI+ LC   RI +   L + +      PN V
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+NTLING       L+A +L  EM++ FG    P+ VT+N++IDG   +G   +A ++ 
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLS-FG--LSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M+ + + P+ ++Y  L+ G C   ++  A+  ++ M  NGV    +T+  MI+  CK+
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D+   LL  M + G++PD VTY++L++GFC VGR   A+E+   +   G   +   Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           + LI   C+   +++A+ +Y  M+ E       T+N L++ L + G + +A + +  M  
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + ++P++ +F   I+G   +G  L+A  VF  +          TY  L+ GLCK G L+ 
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A K    L       D V  +T++  +CK G + KA  L  +M  ++ +P   T+ +L+ 
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           G  +  K    ++   +  A   V+ +  + +  VD + K  +++
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 701



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 246/541 (45%), Gaps = 38/541 (7%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + IL+ +  +       + +F+ +   G  P ++  N ++  + K G     +  L  +L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           +    P+  TFN LIN LCAEG   +++ L +K+      P +VT+NT+++  C+     
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A++L + M ++       DV TYN +I  LC+   + K   LL  M+ R I+PN +TYN
Sbjct: 246 AAIELLDHMKSKG---VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI GF        A  L  EM+  G+ P+ VTFNA+I+ +  +G   +  ++  +M  +
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 362

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P  V+Y  L+DG C       AR  ++ M   G      +Y  +I+  CK+  +++A
Sbjct: 363 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGN----------------------------- 414
           V L  EM  + I P ++TY+ L++G  +VG                              
Sbjct: 423 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 482

Query: 415 ------LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
                 L +A+++ + M L     D FTF   +  LCK G V EA +  + + +      
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 542

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
             +++CLING    G    A  +F  +   G  P   T  +++  LCK G + +A   L 
Sbjct: 543 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 602

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            + A       V + TLL    ++   +K V L  +M    ++    + +S +  L  K 
Sbjct: 603 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662

Query: 589 K 589
           K
Sbjct: 663 K 663



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 230/447 (51%), Gaps = 4/447 (0%)

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G +S  F  L    R C   N   ++ LI     EG I ++  +F+ + ++  +P+V T 
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N ++  + ++   +      +EM+     IC PDV T+N +I+ LC +G  +K+  L+ +
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKR--KIC-PDVATFNILINVLCAEGSFEKSSYLMQK 218

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+     P ++TYN+++  +C    +K A  L   M   GV  DV T+N +I+  C+  +
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 278

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + K   LL  M +R ++P+ VTYN+L++GF   G++  A +L   M+S G   +  ++N 
Sbjct: 279 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 338

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+ +  +   ++A+ ++  M ++ + PS ++Y  LL GL +      A     +M+ N 
Sbjct: 339 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           V     T+   IDGLCKNGF+ EAV +   +     +  I TY+ LING CK+GR KTA 
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 458

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++  R+   G  P+ +  ST+I+  C+ G + +A  +   M  +       TF  L+   
Sbjct: 459 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 518

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            +  K ++    +  M ++ ++ + +S
Sbjct: 519 CKAGKVAEAEEFMRCMTSDGILPNTVS 545



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/575 (25%), Positives = 257/575 (44%), Gaps = 21/575 (3%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKS-GNITSNEAVYFFDCMIKMKPSP 79
           N   SFG  PN  T                L D H S GN    EA+  F  M     +P
Sbjct: 322 NEMLSFGLSPNHVT-------------FNALIDGHISEGNF--KEALKMFYMMEAKGLTP 366

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
              S+ +LL  L KN ++D     + R+  NG+         +I+ LCK G    A V+L
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             + +    P+ VT++ LING C  GR   A  +  ++      PN + ++TLI   CR 
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A++++E M+ E       D  T+N ++  LCK G V +A+E +  M    I PN 
Sbjct: 487 GCLKEAIRIYEAMILEGHT---RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           ++++ LI G+    +  +A  +F EM   G  P   T+ +++   CK G + +  + L+ 
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           +       DTV YN+L+   C  G +++A  LF  MV +    D Y+Y  LI+  C+  K
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663

Query: 380 VEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
              A+   +E  +   + P+ + Y   + G+F+ G     +   ++M      PD  T  
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             IDG  + G + +   +   + N      + TYN L++G  K   + T+  L+  +   
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +PD +TC +++  +C+   ++    +L     +       TF  L+     N + +  
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             L+  M +  + + D      +V +L+++ +++E
Sbjct: 844 FDLVKVMTSLGISL-DKDTCDAMVSVLNRNHRFQE 877



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 230/469 (49%), Gaps = 8/469 (1%)

Query: 97  YDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNF 156
           +  +++ ++  NSN   P ++  ++LI    + G+   +  +   +    F P+  T N 
Sbjct: 109 FGALMTTYRLCNSN---PSVY--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNA 163

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           ++  +   G  +      K++      P+V TFN LIN LC   +   +  L ++M    
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG 223

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
            A   P +VTYN+++   CK G    A ELL  MK + ++ +V TYN LI   C  +   
Sbjct: 224 YA---PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +   L  +M    + P+ VT+N +IN    +GK+   ++LL  M+  G++P+ VT+N+L+
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           DG    G    A ++F  M +KG      SY +L++  CK+ + + A   Y  M    + 
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
              ITY  ++ GL + G L +A+ L+++M  + + PD  T++  I+G CK G    A ++
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              I           Y+ LI   C+MG LK A +++  +  +G   D  T + ++  LCK
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            G++ +A + +  M +   +P+ V+F  L+ G+  + +  K   +  +M
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/553 (24%), Positives = 247/553 (44%), Gaps = 39/553 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV   + M K    P + +++ L+    K  ++ T   +  R+   GL P+  + + L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+MG    A  +   ++    T +  TFN L+  LC  G++ EA    + +     
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN V+F+ LING   +   L A  +F+EM  + G    P   TY S++ GLCK G + +
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMT-KVGH--HPTFFTYGSLLKGLCKGGHLRE 596

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++ L  +       + + YN+L+   C   +  +A  LF EM+   + PD  T+ ++I+
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656

Query: 303 YNCKDGK------------------------------MDKVNR------LLELMIQRGVN 326
             C+ GK                              M K  +        E M   G  
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 716

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD VT N+++DG+  +G+I +  +L   M ++    ++ +YNIL++   K + V  +  L
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           YR ++   I P  +T ++L+ G+ +   L   LK++       V  D +TF   I   C 
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           NG +  A  + + + +    L  +T + +++ L +  R + +  + H +  +G  P+   
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 896

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              +I+ LC+ G +  A  +  +M A    P  V    ++R   +  K  +  +LL  M 
Sbjct: 897 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956

Query: 567 AEKLVVSDLSLSS 579
             KLV +  S ++
Sbjct: 957 KMKLVPTIASFTT 969



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 247/544 (45%), Gaps = 54/544 (9%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            +A   FD M K+   P   ++  LL  L K           K L++     D  + N L+
Sbjct: 561  KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-C 182
              +CK G  + A  + G +++    P++ T+  LI+GLC +G+ + A    K+       
Sbjct: 621  TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             PN V +   ++G+ +       +  F E ++  G    PD+VT N++IDG  + G ++K
Sbjct: 681  LPNKVMYTCFVDGMFKAGQWKAGI-YFREQMDNLGHT--PDIVTTNAMIDGYSRMGKIEK 737

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              +LL +M ++N  PN+ TYN L+ G+    D   +  L+  ++ NG+ PD +T ++++ 
Sbjct: 738  TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 797

Query: 303  YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR- 361
              C+   ++   ++L+  I RGV  D  T+N L+   C  G I+ A +L   M S G   
Sbjct: 798  GICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL 857

Query: 362  -------------------------HDVYSYNI---------LINANCKDQKVEDAVCLY 387
                                     H++    I         LIN  C+   ++ A  + 
Sbjct: 858  DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 917

Query: 388  REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             EM++ +I P  +  + ++  L + G   +A  L+  M    +VP   +F T +   CKN
Sbjct: 918  EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 977

Query: 448  GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
            G V+EA+++   + NC  +L + +YN LI GLC  G +  A +L+  ++  G + +  T 
Sbjct: 978  GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1037

Query: 508  STMIH-WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              +I   L +E     A+ +L D+              L RGF+ +   S+      KMA
Sbjct: 1038 KALIRGLLARETAFSGADIILKDL--------------LARGFITSMSLSQDSHRNLKMA 1083

Query: 567  AEKL 570
             EKL
Sbjct: 1084 MEKL 1087



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 142/566 (25%), Positives = 247/566 (43%), Gaps = 43/566 (7%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            EA+  ++ MI    +    +F +L+T L K  +        + + S+G+ P+    + LI
Sbjct: 491  EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
            N     G    AF V   + +    P   T+  L+ GLC  G + EA +  K L+     
Sbjct: 551  NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610

Query: 184  PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
             + V +NTL+  +C++ N   A+ LF EMV        PD  TY S+I GLC+ G    A
Sbjct: 611  VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS---ILPDSYTYTSLISGLCRKGKTVIA 667

Query: 244  KELLLQMKDR-NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMI 301
                 + + R N+ PN + Y   + G      WK A   F E MDN G  PD+VT NAMI
Sbjct: 668  ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK-AGIYFREQMDNLGHTPDIVTTNAMI 726

Query: 302  NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-- 359
            +   + GK++K N LL  M  +   P+  TYN L+ G+     +S +  L+ S++  G  
Sbjct: 727  DGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 786

Query: 360  ------------------------------CRH---DVYSYNILINANCKDQKVEDAVCL 386
                                          CR    D Y++N+LI+  C + ++  A  L
Sbjct: 787  PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846

Query: 387  YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             + M S  I     T + ++S L +     ++  ++ +M    + P+S  +   I+GLC+
Sbjct: 847  VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 906

Query: 447  NGFVLEAVQVFQAIRNCK-CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
             G +  A  V + +   K C   +   + ++  L K G+   A  L   +     +P + 
Sbjct: 907  VGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965

Query: 506  TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            + +T++H  CK G + +A +L + M         V++  L+ G       +    L  +M
Sbjct: 966  SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025

Query: 566  AAEKLVVSDLSLSSKVVDLLSKDKKY 591
              +  + +  +  + +  LL+++  +
Sbjct: 1026 KGDGFLANATTYKALIRGLLARETAF 1051



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 52/115 (45%)

Query: 62   SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            ++EA      M+KMK  P + SFT L+ +  KN      + L   +++ GL  DL   N+
Sbjct: 945  ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004

Query: 122  LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            LI  LC  G  + AF +   +    F  N  T+  LI GL A       A +  K
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 165/574 (28%), Positives = 266/574 (46%), Gaps = 68/574 (11%)

Query: 79   PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
            P + ++  LL    K  +Y   + L   +   G+  D+   N+ I+ LC    ++ A+++
Sbjct: 1017 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 1076

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            L ++ +   +PN VT+N LING   EG+I  AA++F +++ F   PN VT+N LI G C 
Sbjct: 1077 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 1136

Query: 199  TRNTLVALKLFEEM------VNE------FGAICKPDV--------------------VT 226
              +   AL+L + M      +NE         +CK +                     + 
Sbjct: 1137 VGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA 1196

Query: 227  YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
            Y  +IDGLCK+G +D+A +L+  M    +NP+VITY+SLI GFC V + K AK +   M 
Sbjct: 1197 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY 1256

Query: 287  D-----------------------------------NGVQPDVVTFNAMINYNCKDGKMD 311
                                                NG   D  T N +++  C+DGK+ 
Sbjct: 1257 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 1316

Query: 312  KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
            +  + L  M + G+ P+++TY+ +++G+  +G    A   F  M+  G     ++Y  L+
Sbjct: 1317 EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 1376

Query: 372  NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
               CK   + +A      +         + YNTLL+   + GNL +A+ L DKM  N+V+
Sbjct: 1377 KGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 1436

Query: 432  PDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PDS+T+++ + GLC+ G  + AV +F  A+           Y CL++GL K G  K A  
Sbjct: 1437 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFY 1496

Query: 491  LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
             F  +  KG  PD V  + +I    + GQM KAND    M      P+  T+  LL GF 
Sbjct: 1497 FFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFS 1556

Query: 551  QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            +     + + L   M  E +    L+  S ++ L
Sbjct: 1557 KKQALLRYLSLYSTMMREGIFPDKLTFHSLILGL 1590



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 168/573 (29%), Positives = 267/573 (46%), Gaps = 38/573 (6%)

Query: 65   AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
            AV  F+ +  +   P + +  ++L  + K+K+ + V SLF+ ++  G+ P++   N+LIN
Sbjct: 933  AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 992

Query: 125  CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             LC  G    A  +L ++  + F P  VT+N L+N  C +GR   A  L   +     + 
Sbjct: 993  GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEA 1052

Query: 185  NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
            +V T+N  I+ LC    +  A  L ++M  E   +  P+ VTYN++I+G  K+G +  A 
Sbjct: 1053 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKE---MISPNEVTYNTLINGFVKEGKIGVAA 1109

Query: 245  ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            ++  +M   +++PN +TYN+LI G C V D++EA  L   M   G++ + VT+  ++N  
Sbjct: 1110 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 1169

Query: 305  CKDGKMDKVNRLLELM-----------------------------------IQRGVNPDT 329
            CK  K +   RLLE M                                    + GVNPD 
Sbjct: 1170 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 1229

Query: 330  VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            +TY+SL++GFC VG I  A+E+   M   G   +   Y+ LI   C+   V +A+ +Y  
Sbjct: 1230 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAV 1289

Query: 390  MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
            M          T N L+S L + G LG+A K +  M    +VP+S T+   I+G    G 
Sbjct: 1290 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 1349

Query: 450  VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
             L A   F  +  C       TY  L+ GLCK G L  A K  +RL +     D V  +T
Sbjct: 1350 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNT 1409

Query: 510  MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
            ++   CK G + +A  L   M   N +P   T+ +LL G  +  K    V L        
Sbjct: 1410 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG 1469

Query: 570  LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             +  +  + + +VD LSK    +     F  ++
Sbjct: 1470 TLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 1502



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 226/476 (47%), Gaps = 19/476 (3%)

Query: 90   MLAKNKQYDTVVSLFKRL-----NSNGLFPDLF-----------VLNLLINCLCKMGITS 133
            +L K + YD+  S+ + L      S  +F  L            V +LLI    K G+  
Sbjct: 872  ILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMID 931

Query: 134  GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
             A      +    F P+  T N ++  +  + R      LF++++     PNV TFN LI
Sbjct: 932  YAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILI 991

Query: 194  NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
            NGLC   N   A  L ++M  E G +  P +VTYN++++  CK G    A EL+  M  +
Sbjct: 992  NGLCVEGNLKKAGNLLKQM-EENGFV--PTIVTYNTLLNWYCKKGRYKAAIELIDYMICK 1048

Query: 254  NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
             I  +V TYN  I   C      +A  L  +M    + P+ VT+N +IN   K+GK+   
Sbjct: 1049 GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVA 1108

Query: 314  NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             ++   M +  ++P+ VTYN+L+ G C VG    A  L   M + G R +  +Y  L+N 
Sbjct: 1109 AQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNG 1168

Query: 374  NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             CK +K E A  L   M    +    I Y  L+ GL + G L +A++L+  M  + V PD
Sbjct: 1169 LCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPD 1228

Query: 434  SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
              T+++ I+G C+ G +  A ++   +      L    Y+ LI   C+ G +  A K++ 
Sbjct: 1229 VITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYA 1288

Query: 494  RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
             +   G   D  TC+ ++  LC++G++ +A   L  M     VP+ +T+  ++ G+
Sbjct: 1289 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 1344



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 150/574 (26%), Positives = 270/574 (47%), Gaps = 18/574 (3%)

Query: 31   NPKTDLSSHHFKDGT-----SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFT 85
            +    L  + +KDG      + +  +N   + GNI S + +     + +M  S  + +  
Sbjct: 1211 DEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEI-----ICRMYRSGLVLNKI 1265

Query: 86   ILLTMLAKNKQYDTV---VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
            I  T++    Q+  V   + ++  +N NG   D F  N+L++ LC+ G    A   L  +
Sbjct: 1266 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 1325

Query: 143  LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
             R    PN++T++ +ING  + G  + A   F  +      P+  T+ +L+ GLC+  N 
Sbjct: 1326 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 1385

Query: 203  LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            + A K    +    GA+   D V YN+++   CK G + +A  L  +M   N+ P+  TY
Sbjct: 1386 VEAKKFLNRLHYIPGAV---DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTY 1442

Query: 263  NSLICGFCCVDDWKEAKCLFIEMMDNGVQ-PDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
            +SL+ G C       A CLF   M  G   P+ V +  +++   K G         E M+
Sbjct: 1443 SSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 1502

Query: 322  QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            ++G  PDTV +N+++D     G++ +A + F +M   G   ++ +YNIL++   K Q + 
Sbjct: 1503 KKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALL 1562

Query: 382  DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
              + LY  M+ E I P  +T+++L+ GL + G     +KL+ KM +   + D FTF   I
Sbjct: 1563 RYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILI 1622

Query: 442  DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            +   ++G + +A  +   +         +TYN + NGL K    + +  + H +   G I
Sbjct: 1623 NKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVI 1682

Query: 502  PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            P      T+I+ +C+ G +  A  L  +MEA      EV    ++RG +   K    +++
Sbjct: 1683 PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLV 1742

Query: 562  LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            L  M   +L+ +  + ++ ++    +D K  E L
Sbjct: 1743 LDHMLRMRLLPTIATFTT-LMHRFCRDAKIAEAL 1775



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 228/508 (44%), Gaps = 39/508 (7%)

Query: 65   AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
            A  FFD MIK    P   ++  LL  L K            RL+      D  + N L+ 
Sbjct: 1353 AFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLA 1412

Query: 125  CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF-KKLNVFACD 183
              CK G    A  +  +++++   P++ T++ L+ GLC +G+ + A  LF   +      
Sbjct: 1413 ETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLF 1472

Query: 184  PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            PN V +  L++GL +  +   A   FEEM+ +    C PD V +N+IID   + G + KA
Sbjct: 1473 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK--GTC-PDTVAFNAIIDSCSRRGQMMKA 1529

Query: 244  KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +    M+   + PN+ TYN L+ GF           L+  MM  G+ PD +TF+++I  
Sbjct: 1530 NDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILG 1589

Query: 304  NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
              K G  D   +LL  MI  G   D  T+N L++ +   G++ +A +L   M + G   D
Sbjct: 1590 LSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPD 1649

Query: 364  VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              +YN + N   K     ++  +  EML   + P    Y TL++G+ +VG++  A KL D
Sbjct: 1650 RDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKD 1709

Query: 424  KMQL-----------------------------------NDVVPDSFTFATYIDGLCKNG 448
            +M+                                      ++P   TF T +   C++ 
Sbjct: 1710 EMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA 1769

Query: 449  FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
             + EA+++   +  C  +L +  YN LI G+C  G    A +L+  ++H+   P++ T +
Sbjct: 1770 KIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYA 1829

Query: 509  TMIHWLCKEGQMDKANDLLLDMEAKNCV 536
             ++  +     + +   LL D++ +  +
Sbjct: 1830 VLVDAISAANNLIQGEKLLTDLQERGLI 1857



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 178/353 (50%), Gaps = 8/353 (2%)

Query: 216  FGAI------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            FGA+      C      ++ +I    K+G +D A E    +      P+V T N ++   
Sbjct: 900  FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASM 959

Query: 270  CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
                  +    LF EM D G+ P+V TFN +IN  C +G + K   LL+ M + G  P  
Sbjct: 960  VKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTI 1019

Query: 330  VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            VTYN+L++ +C  GR   A EL   M+ KG   DV +YN+ I+  C + +   A  L ++
Sbjct: 1020 VTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKK 1079

Query: 390  MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
            M  E I P+ +TYNTL++G  + G +G A ++ ++M   D+ P+  T+   I G C  G 
Sbjct: 1080 MRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGD 1139

Query: 450  VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
              EA+++   +      L   TY  L+NGLCK  + + A +L  R++    +   +  + 
Sbjct: 1140 FEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTV 1199

Query: 510  MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF--VQNNKKSKVVV 560
            +I  LCK G +D+A  L+ +M      P  +T+ +L+ GF  V N K +K ++
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 1252



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 144/299 (48%), Gaps = 19/299 (6%)

Query: 311  DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK------------ 358
            D    +L  + Q G+   ++ + +LMD + L   I    +L + +  K            
Sbjct: 880  DSAKSILRHLCQMGIGSKSI-FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFE 938

Query: 359  -----GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
                 G +  VY+ N+++ +  KD++ E    L+REM  + I P+V T+N L++GL   G
Sbjct: 939  LVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEG 998

Query: 414  NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            NL  A  L+ +M+ N  VP   T+ T ++  CK G    A+++   +     E  + TYN
Sbjct: 999  NLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYN 1058

Query: 474  CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
              I+ LC   R   A  L  +++ +   P+ VT +T+I+   KEG++  A  +  +M   
Sbjct: 1059 VFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKF 1118

Query: 534  NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
            +  P+ VT+  L+ G        + + LL  M A  L +++++  + +++ L K +K+ 
Sbjct: 1119 DLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT-LLNGLCKHEKFE 1176


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 263/530 (49%), Gaps = 10/530 (1%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKN-KQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F+ M+       + S  + LT L+K+  +  T + +F+     G+  ++   N++
Sbjct: 636  EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 695

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I+ +C++G    A  +L  +    +TP+ ++++ ++NG C  G + +  +L + +     
Sbjct: 696  IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 755

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             PN   + ++I  LCR      A + F EM+ + G +  PD V Y ++IDG CK G +  
Sbjct: 756  KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GIL--PDTVVYTTLIDGFCKRGDIRA 812

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            A +   +M  R+I P+V+TY ++I GFC + D  EA  LF EM   G++PD VTF  +IN
Sbjct: 813  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872

Query: 303  YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              CK G M    R+   MIQ G +P+ VTY +L+DG C  G +  A EL   M   G + 
Sbjct: 873  GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932

Query: 363  DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            ++++YN ++N  CK   +E+AV L  E  +  +    +TY TL+    + G +  A +++
Sbjct: 933  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992

Query: 423  DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             +M    + P   TF   ++G C +G + +  ++   +          T+N L+   C  
Sbjct: 993  KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 1052

Query: 483  GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
              LK A  ++  +  +G  PD  T   ++   CK   M +A  L  +M+ K    S  T+
Sbjct: 1053 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 1112

Query: 543  CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
              L++GF++  K  +   +  +M  E      L+   ++ D  S D KY+
Sbjct: 1113 SVLIKGFLKRKKFLEAREVFDQMRRE-----GLAADKEIFDFFS-DTKYK 1156



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/569 (27%), Positives = 278/569 (48%), Gaps = 10/569 (1%)

Query: 36   LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTS--FTILLTMLAK 93
            ++S   K   S+     +R K  N+T +  V FFD ++      G     F +   +L  
Sbjct: 573  VASKDLKVAQSLISSFWERPKL-NVT-DSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVD 630

Query: 94   NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI-TSGAFVVLGRILRSCFTPNTV 152
                     +F+++ + GL   +   N+ +  L K    T+ A +V           N  
Sbjct: 631  FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 690

Query: 153  TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            ++N +I+ +C  GRI EA  L   + +    P+V++++T++NG CR        KL E M
Sbjct: 691  SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750

Query: 213  VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
              +     KP+   Y SII  LC+   + +A+E   +M  + I P+ + Y +LI GFC  
Sbjct: 751  KRKG---LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807

Query: 273  DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
             D + A   F EM    + PDV+T+ A+I+  C+ G M +  +L   M  +G+ PD+VT+
Sbjct: 808  GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867

Query: 333  NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
              L++G+C  G +  A  +   M+  GC  +V +Y  LI+  CK+  ++ A  L  EM  
Sbjct: 868  TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 927

Query: 393  ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
              ++P++ TYN++++GL + GN+ +A+KL+ + +   +  D+ T+ T +D  CK+G + +
Sbjct: 928  IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 987

Query: 453  AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
            A ++ + +     +  I T+N L+NG C  G L+   KL + +  KG  P+  T ++++ 
Sbjct: 988  AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 1047

Query: 513  WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
              C    +  A  +  DM ++   P   T+  L++G  +     +   L  +M  +   V
Sbjct: 1048 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 1107

Query: 573  SDLSLSSKVVDLLSKDK--KYRECLNQFR 599
            S  + S  +   L + K  + RE  +Q R
Sbjct: 1108 SVSTYSVLIKGFLKRKKFLEAREVFDQMR 1136



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 169/365 (46%), Gaps = 42/365 (11%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            K G+I +  A  FF  M     +P + ++T +++   +         LF  +   GL PD
Sbjct: 806  KRGDIRA--ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                  LIN  CK G    AF V   ++++  +PN VT+  LI+GLC EG +  A  L  
Sbjct: 864  SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 923

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGL 234
            ++      PN+ T+N+++NGLC++ N   A+KL    V EF A     D VTY +++D  
Sbjct: 924  EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----VGEFEAAGLNADTVTYTTLMDAY 979

Query: 235  CKDGFVDKAKELLLQM-------------------------KD----------RNINPNV 259
            CK G +DKA+E+L +M                         +D          + I PN 
Sbjct: 980  CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1039

Query: 260  ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
             T+NSL+  +C  ++ K A  ++ +M   GV PD  T+  ++  +CK   M +   L + 
Sbjct: 1040 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 1099

Query: 320  MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
            M  +G +    TY+ L+ GF    +   ARE+F  M  +G   D   ++   +   K ++
Sbjct: 1100 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 1159

Query: 380  VEDAV 384
             +  V
Sbjct: 1160 PDTIV 1164


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 148/461 (32%), Positives = 240/461 (52%), Gaps = 7/461 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV     + +++  P   +   +L  LA+N+Q   V  LF  L      P++F  N++
Sbjct: 151 DDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLP----VPNVFTFNIV 206

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G    A  +  R+     +P+ VT+N LI+G    G + E  +L  ++    C
Sbjct: 207 IDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGC 266

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +VVT+N LIN   +      A   F EM  + G +   +VVT+++ +D  CK+G V +
Sbjct: 267 AADVVTYNALINCFSKFGRMEKAYSYFGEMKRQ-GVVA--NVVTFSTFVDAFCKEGLVQE 323

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  QM+ R + PN  TY SL+ G C      +A  L  EM+  G+ P+VVT+  M++
Sbjct: 324 AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVD 383

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+ + + +L LM + GV  + + Y +L+ G  +     RA +L   M +KG   
Sbjct: 384 GLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMEL 443

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV  Y  LI   CKDQKV++A  L  +M    +RP+ + Y T++  LF+ G   +A+ L+
Sbjct: 444 DVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALL 503

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            K+  +   P+  T+   IDGLCK G + EA+  F  +R    +  ++ Y  LI+G CK+
Sbjct: 504 HKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKI 563

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           G L  A  L + +  KG   D V  +++I    K+  +  A
Sbjct: 564 GSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDA 604



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 232/469 (49%), Gaps = 3/469 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F  M  M  SP + ++  L+    K    + V  L   +  +G   D+   N LI
Sbjct: 218 EARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALI 277

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           NC  K G    A+   G + R     N VTF+  ++  C EG + EA +LF ++ V    
Sbjct: 278 NCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMM 337

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T+ +L++G C+      A+ L +EMV++ G +  P+VVTY  ++DGLCK+G V +A
Sbjct: 338 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ-GLV--PNVVTYTVMVDGLCKEGKVAEA 394

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +L  M+   +  N + Y +LI G    ++ + A  L  +M + G++ DV  +  +I  
Sbjct: 395 DNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWG 454

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CKD K+D+   LL  M   G+ P+TV Y ++MD     G+ S A  L   ++  G + +
Sbjct: 455 LCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPN 514

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +Y  LI+  CK   + +A+  + +M    + P+V  Y  L+ G  ++G+L  A+ L++
Sbjct: 515 VVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMN 574

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M    +  D   + + IDG  K   + +A  +   +     +L +  Y C I+G C M 
Sbjct: 575 EMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMN 634

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
            ++ A  +   +   G  PD    + +I    K G M++A+ L  +ME+
Sbjct: 635 MMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 232/463 (50%), Gaps = 19/463 (4%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L  RL   G  P L     L++ L +  +  G         R    P+ V  + L++ L 
Sbjct: 98  LLSRLLGAGHRPHLAAS--LVDLLHRAALALGP--------RRSALPSVV--DTLLSLLA 145

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G + +A R   ++      PN  T N ++  L R R   +  +LF+        +  P
Sbjct: 146 DHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFD-------LLPVP 198

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +V T+N +ID LCK+G + +A+ L ++MK    +P+V+TYNSLI G+    D +E + L 
Sbjct: 199 NVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLV 258

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM  +G   DVVT+NA+IN   K G+M+K       M ++GV  + VT+++ +D FC  
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKE 318

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G +  A +LF  M  +G   + ++Y  L++  CK  +++DA+ L  EM+ + + P+V+TY
Sbjct: 319 GLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 378

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
             ++ GL + G + +A  ++  M+   V  +   + T I G   N     A+ +   ++N
Sbjct: 379 TVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKN 438

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              EL +  Y  LI GLCK  ++  A  L H++   G  P+ V  +T++  L K G+  +
Sbjct: 439 KGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESE 498

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           A  LL  +      P+ VT+C L+ G  +    S+ +   +KM
Sbjct: 499 AVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM 541



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 3/190 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            +EAV     ++     P + ++  L+  L K       +S F ++   GL P++     
Sbjct: 496 ESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTA 555

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+  CK+G  + A  ++  ++    + + V +  LI+G   +  + +A  L  K+    
Sbjct: 556 LIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESG 615

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              ++  +   I+G C       A  +  EM+   G    PD   YN +I    K G ++
Sbjct: 616 LQLDLYCYTCFISGFCNMNMMQEARGVLSEMI---GTGITPDKTVYNCLIRKYQKLGNME 672

Query: 242 KAKELLLQMK 251
           +A  L  +M+
Sbjct: 673 EASSLQNEME 682


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 253/483 (52%), Gaps = 3/483 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++    K  ++D V ++   +    +FPD+   N++++   + G    A  ++  +
Sbjct: 97  TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +     P  VT+N ++ GLC  G   +A  +FK+++ F   P+V +F  LI G CR    
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             ALK+++EM +      KPD+V+++ +I    + G +D A   L +M+   + P+ + Y
Sbjct: 217 EEALKIYKEMRHRG---IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             +I GFC      +A  +  EM+  G  PDVVT+N ++N  CK+ ++     LL  M +
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RGV PD  T+ +L+ G+C+ G++ +A +LF +M+++  R D+ +YN LI+  C+   ++ 
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+ +M S  I P+ +TY+ L+    + G + DA   +D+M    ++P+  T+ + I 
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 453

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G C++G V +  +  Q +   K    + TYN LI+G  K  ++  A KL + ++ +   P
Sbjct: 454 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 513

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           DVVT + +I+     G + +A  +   M AK   P   T+ +++ G V      +   L 
Sbjct: 514 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLH 573

Query: 563 HKM 565
            +M
Sbjct: 574 DEM 576



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 239/459 (52%), Gaps = 5/459 (1%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F D  +    ++ R ++G+  +  A+   D M+     PG+ ++  +L  L ++  +D  
Sbjct: 127 FPDVVTHNVMVDARFRAGD--AEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKA 184

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
             +FK ++  G+ PD+    +LI   C++G    A  +   +      P+ V+F+ LI  
Sbjct: 185 WEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGL 244

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
               G++  A    +++  F   P+ V +  +I G CR      AL++ +EMV   G  C
Sbjct: 245 FARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV---GCGC 301

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PDVVTYN++++GLCK+  +  A+ LL +M++R + P++ T+ +LI G+C      +A  
Sbjct: 302 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 361

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF  M++  ++PD+VT+N +I+  C+ G +DK N L + M  R + P+ VTY+ L+D  C
Sbjct: 362 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 421

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G++  A      M++KG   ++ +YN +I   C+   V       ++M+  ++ P +I
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYNTL+ G  +   + DA KL++ M+   V PD  T+   I+G   +G V EA  +F+ +
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 541

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
                E    TY  +ING    G  K A +L   +  +G
Sbjct: 542 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 224/421 (53%), Gaps = 3/421 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           NT T N +++  C      +   +  ++      P+VVT N +++   R  +   A+ L 
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           + MV++     KP +VTYNS++ GLC+ G  DKA E+  +M D  + P+V ++  LI GF
Sbjct: 154 DSMVSKG---LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGF 210

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C V + +EA  ++ EM   G++PD+V+F+ +I    + GKMD     L  M   G+ PD 
Sbjct: 211 CRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 270

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           V Y  ++ GFC  G +S A  +   MV  GC  DV +YN L+N  CK++++ DA  L  E
Sbjct: 271 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 330

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    + P + T+ TL+ G    G L  AL+L D M    + PD  T+ T IDG+C+ G 
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A  ++  + + +      TY+ LI+  C+ G+++ A      + +KG +P+++T ++
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I   C+ G + K    L  M      P  +T+ TL+ G+++ +K      LL+ M  EK
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510

Query: 570 L 570
           +
Sbjct: 511 V 511



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 216/408 (52%), Gaps = 5/408 (1%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK-PDVVTYNSIIDGLCKDGFVDKA 243
           N  T N +++  C+     +     + +++E    C  PDVVT+N ++D   + G  + A
Sbjct: 94  NTYTLNIMVHNYCKA----LEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 149

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L+  M  + + P ++TYNS++ G C    W +A  +F EM D GV PDV +F  +I  
Sbjct: 150 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 209

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G++++  ++ + M  RG+ PD V+++ L+  F   G++  A      M   G   D
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPD 269

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              Y ++I   C+   + DA+ +  EM+     P V+TYNTLL+GL +   L DA  L++
Sbjct: 270 GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 329

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+   V PD  TF T I G C  G + +A+Q+F  + N +    I TYN LI+G+C+ G
Sbjct: 330 EMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 389

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            L  A  L+  +  +   P+ VT S +I   C++GQ++ A   L +M  K  +P+ +T+ 
Sbjct: 390 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 449

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
           ++++G+ ++   SK    L KM   K+    ++ ++ +   + +DK +
Sbjct: 450 SIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 497


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 155/458 (33%), Positives = 248/458 (54%), Gaps = 6/458 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLF--PDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           LL   AKN  Y    ++F  L+  G +   +  ++++L+    K G    A     R   
Sbjct: 129 LLDSFAKNAHYSNS-TIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGD 187

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
             F  + ++ N ++  L  EGRI     ++K++       NVVTF+ +INGLC+      
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A  + E+M   +G    P V+TYN+IIDG CK G + KA  LL +M  + I+PN IT+N 
Sbjct: 248 AGDVVEDM-KAWG--FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNI 304

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI GFC  ++   AK +F EM   G+QP+VVT+N++IN  C +GK+D+   L + M   G
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + P+ VTYN+L++GFC    +  ARE+   +  +G   +V ++N LI+A  K  +++DA 
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L   ML   + P+V TYN L+ G  + GN+ +A KL  +M+ N +  D  T+   +D L
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           CK G   +AV++   +          TYN LI+G  + G    A  +   ++ KG   ++
Sbjct: 485 CKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANI 544

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           VT + +I   C +G++++AN LL +M  K  +P+  T+
Sbjct: 545 VTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 224/433 (51%), Gaps = 3/433 (0%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +L+    KN + D  +  F R    G        N ++  L K G       V   ++R 
Sbjct: 164 MLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR 223

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
               N VTF+ +INGLC  G+  +A  + + +  +   P+V+T+NT+I+G C+      A
Sbjct: 224 RIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
             L +EMV        P+ +T+N +IDG C+D  V  AK++  +M+ + + PNV+TYNSL
Sbjct: 284 DALLKEMV---AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G C      EA  L  +M   G++P+VVT+NA+IN  CK   + +   +L+ + +RG+
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P+ +T+N+L+D +   GR+  A  L   M+  G   +V +YN LI   C++  V++A  
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L +EM    ++  ++TYN L+  L + G    A++L+D+M    + P   T+   IDG  
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYF 520

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           + G    A+ V   +        I TYN LI G C  G+L+ A +L + +  KG IP+  
Sbjct: 521 REGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRT 580

Query: 506 TCSTMIHWLCKEG 518
           T   +   + ++G
Sbjct: 581 TYDILRDEMMEKG 593



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/364 (34%), Positives = 197/364 (54%), Gaps = 13/364 (3%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
            K+G++  +   + F        SP + ++  ++    K  +     +L K + +  + P
Sbjct: 246 QKAGDVVEDMKAWGF--------SPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHP 297

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           +    N+LI+  C+    + A  V   + R    PN VT+N LINGLC+ G++ EA  L 
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQ 357

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDG 233
            K++     PNVVT+N LING C+ +     LK   EM+++ G     P+V+T+N++ID 
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKK----MLKEAREMLDDIGKRGLAPNVITFNTLIDA 413

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
             K G +D A  L   M D  + PNV TYN LI GFC   + KEA+ L  EM  NG++ D
Sbjct: 414 YGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKAD 473

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           +VT+N +++  CK G+  K  RLL+ M + G+NP  +TYN+L+DG+   G  + A  +  
Sbjct: 474 LVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRT 533

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M  KG R ++ +YN+LI   C   K+E+A  L  EML + + P+  TY+ L   + + G
Sbjct: 534 LMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593

Query: 414 NLGD 417
            + D
Sbjct: 594 FIPD 597



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 149/567 (26%), Positives = 264/567 (46%), Gaps = 43/567 (7%)

Query: 26  FGRPPNPKTDLSSHHFKDGTSIAKFLNDRH--------KSGNITS-------NEAV---- 66
           F  P +  T  +SH F D  +I++ +  +H        K  N +S       +EA     
Sbjct: 32  FSSPNSTYTTPNSHTF-DTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLI 90

Query: 67  --YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
             YF     +      +  F  LL +LA  K Y+ + +L      N  + +  + + L  
Sbjct: 91  LCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL-- 148

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
                            +L S    N++  + L+      G +  A   F +   +    
Sbjct: 149 ----------------SVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRL 192

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + ++ N ++  L +     V   +++EM+     +   +VVT++ +I+GLCK G   KA 
Sbjct: 193 SALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGV---NVVTFDVVINGLCKVGKFQKAG 249

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +++  MK    +P+VITYN++I G+C      +A  L  EM+   + P+ +TFN +I+  
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C+D  +    ++ E M ++G+ P+ VTYNSL++G C  G++  A  L   M   G + +V
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN LIN  CK + +++A  +  ++    + P+VIT+NTL+    + G + DA  L   
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    V P+  T+   I G C+ G V EA ++ + +     +  + TYN L++ LCK G 
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
            + A +L   +   G  P  +T + +I    +EG    A ++   ME K    + VT+  
Sbjct: 490 TRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNV 549

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           L++GF    K  +   LL++M  + L+
Sbjct: 550 LIKGFCNKGKLEEANRLLNEMLEKGLI 576



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 175/344 (50%)

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G +D A E   +  D     + ++ N ++            + ++ EM+   +  +VV
Sbjct: 171 KNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVV 230

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           TF+ +IN  CK GK  K   ++E M   G +P  +TYN+++DG+C  G++ +A  L   M
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEM 290

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V+K    +  ++NILI+  C+D+ V  A  ++ EM  + ++P+V+TYN+L++GL   G L
Sbjct: 291 VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +AL L DKM    + P+  T+   I+G CK   + EA ++   I        + T+N L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+   K GR+  A  L   +   G  P+V T + +I   C+EG + +A  L  +ME    
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
               VT+  L+    +  +  K V LL +M    L  S L+ ++
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNA 514



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 79/146 (54%)

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           L K G +     V++ +   +  + + T++ +INGLCK+G+ + A  +   ++  G  P 
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPS 263

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           V+T +T+I   CK G+M KA+ LL +M AK   P+E+TF  L+ GF ++   +    +  
Sbjct: 264 VITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFE 323

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDK 589
           +M  + L  + ++ +S +  L S  K
Sbjct: 324 EMQRQGLQPNVVTYNSLINGLCSNGK 349


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 165/574 (28%), Positives = 266/574 (46%), Gaps = 68/574 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  LL    K  +Y   + L   +   G+  D+   N+ I+ LC    ++ A+++
Sbjct: 266 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 325

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L ++ +   +PN VT+N LING   EG+I  AA++F +++ F   PN VT+N LI G C 
Sbjct: 326 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 385

Query: 199 TRNTLVALKLFEEM------VNE------FGAICKPDV--------------------VT 226
             +   AL+L + M      +NE         +CK +                     + 
Sbjct: 386 VGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA 445

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y  +IDGLCK+G +D+A +L+  M    +NP+VITY+SLI GFC V + K AK +   M 
Sbjct: 446 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY 505

Query: 287 D-----------------------------------NGVQPDVVTFNAMINYNCKDGKMD 311
                                               NG   D  T N +++  C+DGK+ 
Sbjct: 506 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 565

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +  + L  M + G+ P+++TY+ +++G+  +G    A   F  M+  G     ++Y  L+
Sbjct: 566 EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 625

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              CK   + +A      +         + YNTLL+   + GNL +A+ L DKM  N+V+
Sbjct: 626 KGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 685

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           PDS+T+++ + GLC+ G  + AV +F  A+           Y CL++GL K G  K A  
Sbjct: 686 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFY 745

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
            F  +  KG  PD V  + +I    + GQM KAND    M      P+  T+  LL GF 
Sbjct: 746 FFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFS 805

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           +     + + L   M  E +    L+  S ++ L
Sbjct: 806 KKQALLRYLSLYSTMMREGIFPDKLTFHSLILGL 839



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 168/573 (29%), Positives = 267/573 (46%), Gaps = 38/573 (6%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  F+ +  +   P + +  ++L  + K+K+ + V SLF+ ++  G+ P++   N+LIN
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 241

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LC  G    A  +L ++  + F P  VT+N L+N  C +GR   A  L   +     + 
Sbjct: 242 GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEA 301

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T+N  I+ LC    +  A  L ++M  E   +  P+ VTYN++I+G  K+G +  A 
Sbjct: 302 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKE---MISPNEVTYNTLINGFVKEGKIGVAA 358

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           ++  +M   +++PN +TYN+LI G C V D++EA  L   M   G++ + VT+  ++N  
Sbjct: 359 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 418

Query: 305 CKDGKMDKVNRLLELM-----------------------------------IQRGVNPDT 329
           CK  K +   RLLE M                                    + GVNPD 
Sbjct: 419 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 478

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TY+SL++GFC VG I  A+E+   M   G   +   Y+ LI   C+   V +A+ +Y  
Sbjct: 479 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAV 538

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M          T N L+S L + G LG+A K +  M    +VP+S T+   I+G    G 
Sbjct: 539 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 598

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
            L A   F  +  C       TY  L+ GLCK G L  A K  +RL +     D V  +T
Sbjct: 599 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNT 658

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           ++   CK G + +A  L   M   N +P   T+ +LL G  +  K    V L        
Sbjct: 659 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG 718

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +  +  + + +VD LSK    +     F  ++
Sbjct: 719 TLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 751



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 226/476 (47%), Gaps = 19/476 (3%)

Query: 90  MLAKNKQYDTVVSLFKRL-----NSNGLFPDLF-----------VLNLLINCLCKMGITS 133
           +L K + YD+  S+ + L      S  +F  L            V +LLI    K G+  
Sbjct: 121 ILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMID 180

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            A      +    F P+  T N ++  +  + R      LF++++     PNV TFN LI
Sbjct: 181 YAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILI 240

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           NGLC   N   A  L ++M  E G +  P +VTYN++++  CK G    A EL+  M  +
Sbjct: 241 NGLCVEGNLKKAGNLLKQM-EENGFV--PTIVTYNTLLNWYCKKGRYKAAIELIDYMICK 297

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I  +V TYN  I   C      +A  L  +M    + P+ VT+N +IN   K+GK+   
Sbjct: 298 GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVA 357

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
            ++   M +  ++P+ VTYN+L+ G C VG    A  L   M + G R +  +Y  L+N 
Sbjct: 358 AQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNG 417

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK +K E A  L   M    +    I Y  L+ GL + G L +A++L+  M  + V PD
Sbjct: 418 LCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPD 477

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+++ I+G C+ G +  A ++   +      L    Y+ LI   C+ G +  A K++ 
Sbjct: 478 VITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYA 537

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +   G   D  TC+ ++  LC++G++ +A   L  M     VP+ +T+  ++ G+
Sbjct: 538 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 593



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 150/574 (26%), Positives = 270/574 (47%), Gaps = 18/574 (3%)

Query: 31   NPKTDLSSHHFKDGT-----SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFT 85
            +    L  + +KDG      + +  +N   + GNI S + +     + +M  S  + +  
Sbjct: 460  DEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEI-----ICRMYRSGLVLNKI 514

Query: 86   ILLTMLAKNKQYDTV---VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
            I  T++    Q+  V   + ++  +N NG   D F  N+L++ LC+ G    A   L  +
Sbjct: 515  IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 574

Query: 143  LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
             R    PN++T++ +ING  + G  + A   F  +      P+  T+ +L+ GLC+  N 
Sbjct: 575  SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 634

Query: 203  LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            + A K    +    GA+   D V YN+++   CK G + +A  L  +M   N+ P+  TY
Sbjct: 635  VEAKKFLNRLHYIPGAV---DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTY 691

Query: 263  NSLICGFCCVDDWKEAKCLFIEMMDNGVQ-PDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
            +SL+ G C       A CLF   M  G   P+ V +  +++   K G         E M+
Sbjct: 692  SSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 751

Query: 322  QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            ++G  PDTV +N+++D     G++ +A + F +M   G   ++ +YNIL++   K Q + 
Sbjct: 752  KKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALL 811

Query: 382  DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
              + LY  M+ E I P  +T+++L+ GL + G     +KL+ KM +   + D FTF   I
Sbjct: 812  RYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILI 871

Query: 442  DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            +   ++G + +A  +   +         +TYN + NGL K    + +  + H +   G I
Sbjct: 872  NKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVI 931

Query: 502  PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            P      T+I+ +C+ G +  A  L  +MEA      EV    ++RG +   K    +++
Sbjct: 932  PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLV 991

Query: 562  LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            L  M   +L+ +  + ++ ++    +D K  E L
Sbjct: 992  LDHMLRMRLLPTIATFTT-LMHRFCRDAKIAEAL 1024



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 228/508 (44%), Gaps = 39/508 (7%)

Query: 65   AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
            A  FFD MIK    P   ++  LL  L K            RL+      D  + N L+ 
Sbjct: 602  AFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLA 661

Query: 125  CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF-KKLNVFACD 183
              CK G    A  +  +++++   P++ T++ L+ GLC +G+ + A  LF   +      
Sbjct: 662  ETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLF 721

Query: 184  PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            PN V +  L++GL +  +   A   FEEM+ +    C PD V +N+IID   + G + KA
Sbjct: 722  PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK--GTC-PDTVAFNAIIDSCSRRGQMMKA 778

Query: 244  KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +    M+   + PN+ TYN L+ GF           L+  MM  G+ PD +TF+++I  
Sbjct: 779  NDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILG 838

Query: 304  NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
              K G  D   +LL  MI  G   D  T+N L++ +   G++ +A +L   M + G   D
Sbjct: 839  LSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPD 898

Query: 364  VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              +YN + N   K     ++  +  EML   + P    Y TL++G+ +VG++  A KL D
Sbjct: 899  RDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKD 958

Query: 424  KMQL-----------------------------------NDVVPDSFTFATYIDGLCKNG 448
            +M+                                      ++P   TF T +   C++ 
Sbjct: 959  EMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA 1018

Query: 449  FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
             + EA+++   +  C  +L +  YN LI G+C  G    A +L+  ++H+   P++ T +
Sbjct: 1019 KIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYA 1078

Query: 509  TMIHWLCKEGQMDKANDLLLDMEAKNCV 536
             ++  +     + +   LL D++ +  +
Sbjct: 1079 VLVDAISAANNLIQGEKLLTDLQERGLI 1106



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 2/344 (0%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           +C      ++ +I    K+G +D A E    +      P+V T N ++         +  
Sbjct: 158 LCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELV 217

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             LF EM D G+ P+V TFN +IN  C +G + K   LL+ M + G  P  VTYN+L++ 
Sbjct: 218 WSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 277

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C  GR   A EL   M+ KG   DV +YN+ I+  C + +   A  L ++M  E I P+
Sbjct: 278 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 337

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            +TYNTL++G  + G +G A ++ ++M   D+ P+  T+   I G C  G   EA+++  
Sbjct: 338 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 397

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +      L   TY  L+NGLCK  + + A +L  R++    +   +  + +I  LCK G
Sbjct: 398 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 457

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGF--VQNNKKSKVVV 560
            +D+A  L+ +M      P  +T+ +L+ GF  V N K +K ++
Sbjct: 458 MLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 501



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 144/299 (48%), Gaps = 19/299 (6%)

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK------------ 358
           D    +L  + Q G+   ++ + +LMD + L   I    +L + +  K            
Sbjct: 129 DSAKSILRHLCQMGIGSKSI-FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFE 187

Query: 359 -----GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
                G +  VY+ N+++ +  KD++ E    L+REM  + I P+V T+N L++GL   G
Sbjct: 188 LVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEG 247

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           NL  A  L+ +M+ N  VP   T+ T ++  CK G    A+++   +     E  + TYN
Sbjct: 248 NLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYN 307

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
             I+ LC   R   A  L  +++ +   P+ VT +T+I+   KEG++  A  +  +M   
Sbjct: 308 VFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKF 367

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           +  P+ VT+  L+ G        + + LL  M A  L +++++  + +++ L K +K+ 
Sbjct: 368 DLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT-LLNGLCKHEKFE 425


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 245/450 (54%), Gaps = 5/450 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +FT+L T L +  ++  VV LF  L S G+        L+++ LC  G+ + A  ++ R 
Sbjct: 21  AFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV-RE 79

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L   +TP    +N +I GLC   R+M+A ++ +K+   +  PNV T+  L+NGLCR+  T
Sbjct: 80  LSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKT 139

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            +A ++F+EM       CKP+ +TY ++I  L + G +D+A  ++++ +   +  +VIT 
Sbjct: 140 KLAREVFQEMKRNG---CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITC 196

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            +++ G C      +A     EM   GV+P+ VT++ +++   + G++D+V R  E    
Sbjct: 197 TTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKA 256

Query: 323 R-GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           R G + +   Y   +D  C  G + RAR+    +   G   DV +Y++LIN   +  + +
Sbjct: 257 RKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFD 316

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            ++ L  +M    ++P V+TY+TL++ L +     DA +L++ M+     P+  T+ + +
Sbjct: 317 ASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVM 376

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCK+G + E  +V++ +   +C   + TY+ ++NGL K G L +A KLF  ++     
Sbjct: 377 DGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREG 436

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           PD    S +I  LC+ G++++A  +   ME
Sbjct: 437 PDAAAYSMVITSLCRAGKLEEACGMYHGME 466



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 197/402 (49%), Gaps = 7/402 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A    + M++    P + ++TILL  L ++ +      +F+ +  NG  P+      LI
Sbjct: 106 DAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLI 165

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTP-NTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
             L + G    A  V+    RS   P + +T   ++ GLC   R+ +A +  +++     
Sbjct: 166 QHLSRAGEIDEALRVMIE-QRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGV 224

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VT++ L++G  +       ++ FEE     G     +   Y   +D LCK G++D+
Sbjct: 225 RPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSL--EAAAYPGYLDALCKAGYLDR 282

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++ + +++   + P+V+TY+ LI  F     +  +  L  +M  NGV+PDVVT++ +IN
Sbjct: 283 ARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLIN 342

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+ K     RLLELM   G  P+ VTYNS+MDG C  G++     ++  M+   C  
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSP 402

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV +Y+I++N   K   ++ AV L+  + S R  P    Y+ +++ L + G L +A  + 
Sbjct: 403 DVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMY 462

Query: 423 DKMQLNDVVPDSF--TFATYIDGLCKNGFVLEAVQVFQAIRN 462
             M++  V  D+     A  +  LC       A ++ +  R 
Sbjct: 463 HGMEVT-VAGDNICRALAGLVAALCDAKRTDSARRIVEVARE 503



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 38/353 (10%)

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           AK L   +++ G + D   F  +     +  K  +V RL  L+  RGV     TY  ++D
Sbjct: 3   AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C  G  ++A EL V  +S      V+ YN +I   C+  +V DA  +  +M+ E I P
Sbjct: 63  GLCGAGMANQALEL-VRELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +V TY  LL+GL +      A ++  +M+ N   P+  T+ T I  L + G + EA++V 
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW---- 513
              R+ +    + T   ++ GLCK  RL  A K    ++  G  P+ VT S ++H     
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241

Query: 514 --------------------------------LCKEGQMDKANDLLLDMEAKNCVPSEVT 541
                                           LCK G +D+A   + ++     VP  VT
Sbjct: 242 GELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVT 301

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           +  L+  F +  +    + LL  M     V  D+   S ++++L K++K+++ 
Sbjct: 302 YSMLINTFARAGQFDASLELLEDMRRNG-VKPDVVTYSTLINVLCKERKFQDA 353


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 149/488 (30%), Positives = 256/488 (52%), Gaps = 18/488 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +F++L+   ++    +  V  F  +      PDLF  NL+++ L +      A  V  ++
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L+    P+ VT+  LI+GLC   +  +A  LF ++      PN + ++ +++GLC+ +  
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL-LQMKDRNINPNVIT 261
             A +LF +M     + C  D++TYN +++G CK G++D A  LL L  KD +I   VI 
Sbjct: 250 FDAQRLFSKMR---ASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHI-LGVIG 305

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y  LI G      ++EA   + +M+   ++PDV+ +  MI    ++G++ +   LL  M 
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT 365

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           +RG+ PDT+ YN+L+ GFC +G +  A  L + +    C  + ++Y+ILI   CK+  + 
Sbjct: 366 ERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLIN 425

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL-------------N 428
            A  +++EM      PSV+T+N+L++GL +   L +A  L  +M++              
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGT 485

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
           D V D  +    ++ LC++G +L+A ++   + +      I TYN LING CK G +  A
Sbjct: 486 DKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGA 545

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            KLF  +Q KG +PD VT  T+I  L + G+ + A ++   M  K CVP   T+ T++  
Sbjct: 546 FKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTW 605

Query: 549 FVQNNKKS 556
             + N  S
Sbjct: 606 SCRENNIS 613



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 217/445 (48%), Gaps = 16/445 (3%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V +L+I  L K       + VL  +  S    ++  F+ LI      G   +A   F  +
Sbjct: 95  VQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLM 154

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
             F C P++  FN +++ L R    L+AL ++ +M+        PDVVTY  +I GLCK 
Sbjct: 155 RDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLK---CNLNPDVVTYGILIHGLCKT 211

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
                A  L  +M DR I PN I Y+ ++ G C      +A+ LF +M  +G   D++T+
Sbjct: 212 CKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITY 271

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N ++N  CK G +D    LL+L+ + G     + Y  L++G     R   A   +  M+ 
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +  + DV  Y I+I    ++ +V +A+ L  EM    +RP  I YN L+ G   +G L +
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A  L  ++  +D  P++ T++  I G+CKNG + +A  +F+ +    C   + T+N LIN
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLIN 451

Query: 478 GLCKMGRLKTACKLFHRL-------------QHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           GLCK  RL+ A  LF+++             Q    + D+ +   M+  LC+ G + KA 
Sbjct: 452 GLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAY 511

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGF 549
            LL+ +     +P   T+  L+ GF
Sbjct: 512 KLLMQLVDSGVLPDIRTYNILINGF 536



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 233/477 (48%), Gaps = 45/477 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +AV  F  M      P + +F ++L  L + + +   ++++ ++    L PD+    +L
Sbjct: 145 EKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGIL 204

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK   T  A V+   +      PN + ++ +++GLC   +I +A RLF K+    C
Sbjct: 205 IHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGC 264

Query: 183 DPNVVTFNTLINGLCRTR----------------------------NTLVALKLFEEMVN 214
           + +++T+N L+NG C++                             N L   + +EE   
Sbjct: 265 NRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHM 324

Query: 215 EFGAI----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
            +  +     KPDV+ Y  +I GL ++G V +A  LL +M +R + P+ I YN+LI GFC
Sbjct: 325 WYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFC 384

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            +    EA+ L +E+  +   P+  T++ +I   CK+G ++K   + + M + G  P  V
Sbjct: 385 DMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVV 444

Query: 331 TYNSLMDGFCLVGRISRARELFVSM-----------VSKGCRH--DVYSYNILINANCKD 377
           T+NSL++G C   R+  AR LF  M           +S+G     D+ S  +++   C+ 
Sbjct: 445 TFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCES 504

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             +  A  L  +++   + P + TYN L++G  + GN+  A KL  +MQL   +PDS T+
Sbjct: 505 GMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTY 564

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T IDGL + G   +A+++F+ +    C     TY  ++   C+   +  A  ++ +
Sbjct: 565 GTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMK 621



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 206/409 (50%), Gaps = 16/409 (3%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A+  FD M      P    ++I+L+ L + K+      LF ++ ++G   DL   N+
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N  CK G    AF +L  + +       + +  LINGL    R  EA   ++K+    
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V+ +  +I GL +      AL L  EM  E G   +PD + YN++I G C  G++D
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEM-TERG--LRPDTICYNALIKGFCDMGYLD 390

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A+ L L++   +  PN  TY+ LICG C      +A+ +F EM   G  P VVTFN++I
Sbjct: 391 EAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLI 450

Query: 302 NYNCKDGKMDKVNRL-----------LELMIQRGVNP--DTVTYNSLMDGFCLVGRISRA 348
           N  CK  ++++   L           L L + +G +   D  +   +M+  C  G I +A
Sbjct: 451 NGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            +L + +V  G   D+ +YNILIN  CK   +  A  L++EM  +   P  +TY TL+ G
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDG 570

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           L++ G   DAL++ ++M     VP+S T+ T +   C+   +  A+ V+
Sbjct: 571 LYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVW 619



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 197/395 (49%), Gaps = 9/395 (2%)

Query: 210 EEMVNEFGAI----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
           E+ V  FG +    CKPD+  +N I+  L +      A  +  QM   N+NP+V+TY  L
Sbjct: 145 EKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGIL 204

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G C     ++A  LF EM D G+ P+ + ++ +++  C+  K+    RL   M   G 
Sbjct: 205 IHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGC 264

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
           N D +TYN L++GFC  G +  A  L   +   G    V  Y  LIN   + ++ E+A  
Sbjct: 265 NRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHM 324

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
            Y++ML E I+P V+ Y  ++ GL Q G + +AL L+ +M    + PD+  +   I G C
Sbjct: 325 WYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFC 384

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
             G++ EA  +   I    C     TY+ LI G+CK G +  A  +F  ++  G +P VV
Sbjct: 385 DMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVV 444

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T +++I+ LCK  ++++A  L   ME    V     F  L +G  +    + + V++ ++
Sbjct: 445 TFNSLINGLCKANRLEEARLLFYQME---IVRKPSLFLRLSQGTDKVFDIASLQVMMERL 501

Query: 566 AAEKLVVSDLSLSSKVVD--LLSKDKKYRECLNQF 598
               +++    L  ++VD  +L   + Y   +N F
Sbjct: 502 CESGMILKAYKLLMQLVDSGVLPDIRTYNILINGF 536



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 210/479 (43%), Gaps = 57/479 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA  ++  M++    P +  +TI++  L++  +    ++L   +   GL PD    N L
Sbjct: 320 EEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNAL 379

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C MG    A  +   I +    PN  T++ LI G+C  G I +A  +FK++    C
Sbjct: 380 IKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGC 439

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP--------------DVVTYN 228
            P+VVTFN+LINGLC+      A  LF +M      + KP              D+ +  
Sbjct: 440 LPSVVTFNSLINGLCKANRLEEARLLFYQM----EIVRKPSLFLRLSQGTDKVFDIASLQ 495

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +++ LC+ G + KA +LL+Q+ D  + P++ TYN LI GFC   +   A  LF EM   
Sbjct: 496 VMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLK 555

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G  PD VT+  +I+   + G+ +    + E M+++G  P++ TY ++M   C    IS A
Sbjct: 556 GHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLA 615

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
             +++  +                              +R    E++R        +++ 
Sbjct: 616 LSVWMKYLRD----------------------------FRGWEDEKVR--------VVAE 639

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
            F    L  A++ + +M +     D   +  ++ GL +     EA  +F  +++ K  + 
Sbjct: 640 SFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNIS 699

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
             +   LI  LC +  L  A  +F     +G       C+ +   LC    +D+ +D L
Sbjct: 700 SASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQL---LCNLLHLDRKDDAL 755



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 130/265 (49%)

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           K+   +   ++L+ +    +   +  ++ L++ +   G   +A E F  M    C+ D++
Sbjct: 105 KENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLF 164

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           ++N++++   + +    A+ +Y +ML   + P V+TY  L+ GL +     DAL L D+M
Sbjct: 165 AFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEM 224

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
               ++P+   ++  + GLC+   + +A ++F  +R   C   + TYN L+NG CK G L
Sbjct: 225 TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYL 284

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A  L   L   G I  V+    +I+ L +  + ++A+     M  +N  P  + +  +
Sbjct: 285 DDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIM 344

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKL 570
           +RG  Q  + ++ + LL +M    L
Sbjct: 345 IRGLSQEGRVTEALTLLGEMTERGL 369



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 5/226 (2%)

Query: 381 EDAVCLYREMLSE----RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           E+A  LY ++L E     I+ S   ++ L+    + G    A++    M+  D  PD F 
Sbjct: 106 ENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFA 165

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           F   +  L +    L A+ V+  +  C     + TY  LI+GLCK  + + A  LF  + 
Sbjct: 166 FNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMT 225

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +G +P+ +  S ++  LC+  ++  A  L   M A  C    +T+  LL GF ++    
Sbjct: 226 DRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLD 285

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
               LL  +  +  ++  +     +++ L + ++Y E    ++ +L
Sbjct: 286 DAFTLLQLLTKDGHILGVIGYGC-LINGLFRARRYEEAHMWYQKML 330


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 142/428 (33%), Positives = 225/428 (52%), Gaps = 8/428 (1%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N L+  L + G+      +   +L    + +  TFN +IN  C  G + EA +   K+  
Sbjct: 161 NELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQ 220

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+  T  + I G CR+++   A ++FEEM N        + V+YN +I GLC+ G 
Sbjct: 221 AGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR-------NEVSYNQLIHGLCEAGR 273

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D+A  L ++MKD    PNV TY +LI G C   +  +A  L  EM++  + PD++T+N+
Sbjct: 274 IDEAVSLFVRMKDDCCYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYNS 332

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I   C+ G +D   RLL LM +RG+ PD  TY   +D  C   R+  AR LF S+  +G
Sbjct: 333 LIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG 392

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              +V  Y++LI+  CK  KV++A CL+ +MLS+   P+  T+N L+ GL   GNL +AL
Sbjct: 393 VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL 452

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L D+M    + P  +TF   I  + K G   +A +  Q + +   +    TYN  I   
Sbjct: 453 SLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVY 512

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C  G+++ A  +  +++ +G  PD  T +++I    K G    A D+L  M   +C PS 
Sbjct: 513 CSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSH 572

Query: 540 VTFCTLLR 547
            TF +L++
Sbjct: 573 HTFLSLIK 580



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 170/610 (27%), Positives = 274/610 (44%), Gaps = 79/610 (12%)

Query: 5   SSHRSFSLASKAGYRCNFWCSFGRPPNPKTDLSSH--------HFKDGTSIAKFLNDRHK 56
           SS  S +L      + ++W S  + PN K ++ S+        H K  + + K +    K
Sbjct: 72  SSLFSLNLDPHTALQFSYWIS--QTPNFKHNVDSYASLLTLIDHHKIVSDVPKIIVSMIK 129

Query: 57  SGNITSNEAVYFFDCMIKMKPSP----GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGL 112
               ++ +A++  D   KM         +  +  LLT+LA+    D +  L+  +    +
Sbjct: 130 CC-YSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFV 188

Query: 113 FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP----------------------- 149
             D++  NL+IN  CKMG    A   + +++++  +P                       
Sbjct: 189 SMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFR 248

Query: 150 --------NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
                   N V++N LI+GLC  GRI EA  LF ++    C PNV T+  LI GLCR +N
Sbjct: 249 VFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KN 307

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A+ L +EM+        PD++TYNS+I G C+ G +D A  LL  MK+R + P+  T
Sbjct: 308 VHKAMGLLDEMLERNLV---PDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRT 364

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y   I   C  +  +EA+ LF  + + GV  +V+ ++ +I+  CK GK+D+   L E M+
Sbjct: 365 YGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKML 424

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            +  +P+  T+N+L+ G C  G +  A  LF  MV  G +  VY++NILI    K    +
Sbjct: 425 SKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFD 484

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           DA    ++M+S   +P   TYN  +      G + +A  ++ +M+   V PD FT+ + I
Sbjct: 485 DAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLI 544

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL---------------------- 479
               K G    A  V +++ +  CE    T+  LI  L                      
Sbjct: 545 KAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFG 604

Query: 480 -------CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
                   KM       +LF  ++  G  PD      +I  +CK   +  A  LL  M+ 
Sbjct: 605 DVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQK 664

Query: 533 KNCVPSEVTF 542
           +   PSE+ F
Sbjct: 665 EGISPSEMVF 674



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 236/518 (45%), Gaps = 33/518 (6%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P+    S+  L+  L +  + D  VSLF R+  +  +P+++    LI  LC+  +   A 
Sbjct: 254 PNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHK-AM 312

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +L  +L     P+ +T+N LI G C  G +  A RL   +      P+  T+   I+ L
Sbjct: 313 GLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFL 372

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C++     A +LF+ +  E       +V+ Y+ +IDG CK G VD+A  L  +M  +N +
Sbjct: 373 CKSNRVEEARRLFDSLTEEG---VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCS 429

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN  T+N+LI G C   + KEA  LF +M+  G++P V TFN +I    K G  D  ++ 
Sbjct: 430 PNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKC 489

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L+ M+  G  P   TYN+ ++ +C  G++  A ++ V M  +G   D ++Y  LI A  K
Sbjct: 490 LQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGK 549

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF---------------QVGNLGDA--- 418
                 A  + + M      PS  T+ +L+  LF                V N GD    
Sbjct: 550 LGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGS 609

Query: 419 -----------LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
                      ++L ++M+ +   PDS  +   I G+CK   +  A+++   ++      
Sbjct: 610 NMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISP 669

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
               +N +I+  CK+ +   A  +   +   G  P +  C T+I  L +EG+ ++ N + 
Sbjct: 670 SEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVF 729

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             +        E+ +  L+ G ++     +   L  +M
Sbjct: 730 KKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEM 767



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 189/430 (43%), Gaps = 32/430 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++   +  L K+ + +    LF  L   G+  ++ + ++LI+  CK+G    A  +
Sbjct: 360 PDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCL 419

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++L    +PN  TFN LI+GLC+ G + EA  LF ++      P V TFN LI  + +
Sbjct: 420 FEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLK 479

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   A K  ++M++      KP   TYN+ I+  C  G V +A+++++QMK+  + P+
Sbjct: 480 QGDFDDAHKCLQKMMSSGE---KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPD 536

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI----------------- 301
             TY SLI  +  +     A  +   M D   +P   TF ++I                 
Sbjct: 537 DFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETG 596

Query: 302 -----NYNCKDG-------KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
                N+    G       + D V  L E M + G  PD+  Y  L+ G C V  +  A 
Sbjct: 597 VESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIAL 656

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   M  +G       +N +I+  CK QK  +A  +  +M+     P +    TL+ GL
Sbjct: 657 KLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGL 716

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
           ++ G       +  K++      D   +   IDG+ K G V E  Q+F+ +    C    
Sbjct: 717 YEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSP 776

Query: 470 ETYNCLINGL 479
            TY+ L   L
Sbjct: 777 RTYSILTQKL 786


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 156/513 (30%), Positives = 265/513 (51%), Gaps = 13/513 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M K+   P   +++IL+ M  +  + DT +S    +   GL P ++  N L
Sbjct: 384 DEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSL 443

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G  S A  ++  ++     P  VT+  L+ G C++G+I +A RL+ ++     
Sbjct: 444 INGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++ TF TL++GL R      A+KLF EM  E+    KP+ VTYN +I+G C++G + K
Sbjct: 504 VPSIYTFTTLLSGLFRAGLIRDAVKLFTEMA-EWNV--KPNRVTYNVMIEGYCEEGNMSK 560

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E L +M ++ I P+  +Y  LI G C      EAK     +     + + + +  +++
Sbjct: 561 AFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV----SK 358
             C++GK+++   + + M  RGV+ D V Y  L+DG        + R++F+ ++     +
Sbjct: 621 GFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG----SLKHKDRKVFLGLLKEMHDR 676

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G + D   Y  +I+A  K    ++A  ++  M++E   P+ +TY  +++GL + G + +A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKN-GFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
             L  KM+  + VP+  T+  ++D L K  G + +AV++  AI          TYN LI 
Sbjct: 737 EILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLA-NTATYNMLIR 795

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G C+ GR++ A +L  R+   G  PD +T +TMI  LC+   + KA +L   M  K   P
Sbjct: 796 GFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRP 855

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             V + TL+ G     +  K   L ++M  + L
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 157/563 (27%), Positives = 265/563 (47%), Gaps = 71/563 (12%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K+   P + + + LL  L K + +   + LF  + + G+ PD+++   +I  LC++  
Sbjct: 183 MTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKD 242

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            S A  ++ ++  +    N V +N LI+GLC + ++ EA  + K L      P+VVT+ T
Sbjct: 243 LSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCT 302

Query: 192 LINGLCRTRNTLVALKLFEEM----------------------------------VNEFG 217
           L+ GLC+ +   V L++ +EM                                  V EFG
Sbjct: 303 LVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFG 362

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
               P++  YN++ID LCK    D+A+ L  +M    + PN +TY+ LI  FC       
Sbjct: 363 V--SPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDT 420

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A     EM+D G++P V  +N++IN +CK G +     L+  MI + + P  VTY SLM 
Sbjct: 421 ALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMG 480

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G+C  G+I++A  L+  M  KG    +Y++  L++   +   + DAV L+ EM    ++P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKP 540

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           + +TYN ++ G  + GN+  A + +++M    +VPD++++   I GLC  G   EA    
Sbjct: 541 NRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTA---CK------------------------ 490
             +    CEL    Y  L++G C+ G+L+ A   C+                        
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKH 660

Query: 491 --------LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
                   L   +  +G  PD V  ++MI    K G   +A  +   M  + CVP+EVT+
Sbjct: 661 KDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720

Query: 543 CTLLRGFVQNNKKSKVVVLLHKM 565
             ++ G  +    ++  +L  KM
Sbjct: 721 TAVINGLCKAGFVNEAEILCSKM 743



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 272/535 (50%), Gaps = 9/535 (1%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
             D M++++ SP   + + L+  L K  + +  ++L KR+   G+ P++FV N LI+ LC
Sbjct: 319 MIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLC 378

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K      A ++  R+ +    PN VT++ LI+  C  G++  A     ++      P+V 
Sbjct: 379 KGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVY 438

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            +N+LING C+  +   A  L  EM+N+     +P VVTY S++ G C  G ++KA  L 
Sbjct: 439 PYNSLINGHCKFGDISAAESLMAEMINK---KLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M  + I P++ T+ +L+ G       ++A  LF EM +  V+P+ VT+N MI   C++
Sbjct: 496 HEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEE 555

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-CRHDVYS 366
           G M K    L  MI++G+ PDT +Y  L+ G CL G+ S A+ +FV  + KG C  +   
Sbjct: 556 GNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEIC 614

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y  L++  C++ K+E+A+ + ++M    +   ++ Y  L+ G  +  +    L L+ +M 
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMH 674

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              + PD   + + ID   K G   EA  ++  + N  C     TY  +INGLCK G + 
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKE-GQMDKANDLLLDMEAKNCVPSEVTFCTL 545
            A  L  +++    +P+ VT    +  L K  G M KA +L  +   K  + +  T+  L
Sbjct: 735 EAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELH-NAILKGLLANTATYNML 793

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD--KKYRECLNQF 598
           +RGF +  +  +   L+ +M  + +    ++ ++ + +L  ++  KK  E  N  
Sbjct: 794 IRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSM 848



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 243/484 (50%), Gaps = 4/484 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           F +L+    ++++    V +FK + +   L P++  L+ L++ L K      A  +   +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +     P+   +  +I  LC    +  A  +  ++    CD N+V +N LI+GLC+ +  
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A+ + +++    G   KPDVVTY +++ GLCK    +   E++ +M     +P+    
Sbjct: 279 WEAVGIKKDLA---GKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAV 335

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           +SL+ G       +EA  L   + + GV P++  +NA+I+  CK    D+   L + M +
Sbjct: 336 SSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGK 395

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G+ P+ VTY+ L+D FC  G++  A      M+  G +  VY YN LIN +CK   +  
Sbjct: 396 IGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISA 455

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L  EM+++++ P+V+TY +L+ G    G +  AL+L  +M    +VP  +TF T + 
Sbjct: 456 AESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLS 515

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GL + G + +AV++F  +     +    TYN +I G C+ G +  A +  + +  KG +P
Sbjct: 516 GLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVP 575

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D  +   +IH LC  GQ  +A   +  +   NC  +E+ +  LL GF +  K  + + + 
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635

Query: 563 HKMA 566
             M 
Sbjct: 636 QDMG 639



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 187/414 (45%), Gaps = 38/414 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A+  +  M      P + +FT LL+ L +       V LF  +    + P+    N++
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+ G  S AF  L  ++     P+T ++  LI+GLC  G+  EA      L+   C
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + N + +  L++G CR      AL + ++M      +   D+V Y  +IDG  K      
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDL---DLVCYGVLIDGSLKHKDRKV 665

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              LL +M DR + P+ + Y S+I       D+KEA  ++  M++ G  P+ VT+ A+IN
Sbjct: 666 FLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725

Query: 303 YNCKDGKMDKVNRLLELM-----------------------------------IQRGVNP 327
             CK G +++   L   M                                   I +G+  
Sbjct: 726 GLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLA 785

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           +T TYN L+ GFC  GR+  A EL   M+  G   D  +Y  +I+  C+   V+ A+ L+
Sbjct: 786 NTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELW 845

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
             M  + IRP  + YNTL+ G    G +G A +L ++M    + P++ T  T I
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 177/377 (46%), Gaps = 34/377 (9%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  F  M +    P   ++ +++    +             +   G+ PD +    LI
Sbjct: 525 DAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLI 584

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC  G  S A V +  + +     N + +  L++G C EG++ EA  + + + +   D
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVD 644

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-------------------------FGA 218
            ++V +  LI+G  + ++  V L L +EM +                          FG 
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704

Query: 219 I-------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC- 270
                   C P+ VTY ++I+GLCK GFV++A+ L  +M+  N  PN +TY   +     
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTK 764

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            V D K+A  L   ++  G+  +  T+N +I   C+ G+M++ + L+  MI  GV+PD +
Sbjct: 765 GVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCI 823

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TY +++   C    + +A EL+ SM  KG R D  +YN LI+  C   ++  A  L  EM
Sbjct: 824 TYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883

Query: 391 LSERIRPSVITYNTLLS 407
           L + ++P+  T  T +S
Sbjct: 884 LRQGLKPNTETSETTIS 900



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 54/291 (18%)

Query: 356 VSKGCRHDVYSYNILINA------------------------------------NCK--- 376
           + +G  H   S+ ILI+A                                     CK   
Sbjct: 96  LHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDALFSCYEKCKLSS 155

Query: 377 -------------DQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLI 422
                         ++V D V +++ M+++  + P V T + LL GL +  + G A++L 
Sbjct: 156 SSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D M    + PD + +   I  LC+   +  A ++   +    C++ I  YN LI+GLCK 
Sbjct: 216 DDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKK 275

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            ++  A  +   L  K   PDVVT  T++  LCK  + +   +++ +M      PSE   
Sbjct: 276 QKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAV 335

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            +L+ G  +  K  + + L+ K  AE  V  ++ + + ++D L K + + E
Sbjct: 336 SSLVEGLRKRGKVEEALNLV-KRVAEFGVSPNIFVYNALIDSLCKGRNFDE 385


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 151/466 (32%), Positives = 231/466 (49%), Gaps = 6/466 (1%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           ++ + +   G  PD+    LLI    K G        L R+L +   PN + +N LI+ L
Sbjct: 15  AIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCL 74

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  G + EA    K++    C PNVV++N +I+G C+ RN   AL    EM  E G    
Sbjct: 75  CKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREM-EELGHPPT 132

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P    Y+SI+   CK G V KA ++  +M  +   P+++ +N L+ G        EA+ L
Sbjct: 133 PH--AYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAREL 190

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           F  M   G +PDVVT+N MI   CK  K+D+   LLE M Q  V+P  VTY +L+D  C 
Sbjct: 191 FRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK 250

Query: 342 VGRISRARELFVSMVSKGC--RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
             R+ +A E+F  M    C      YS  ILIN  CK ++  +A  +++EM    I P+V
Sbjct: 251 FARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTV 310

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TYNTLL GL     L DA++L   M      P+ FT+   I  LCK   V EA ++  A
Sbjct: 311 VTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSA 370

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +R+      ++ +  L++ L + GRL  A +L+  +        V + + ++  + + G 
Sbjct: 371 MRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGS 430

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +D+A D L  M     VP + T+  L+ G     K  +   L+ ++
Sbjct: 431 VDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 227/456 (49%), Gaps = 8/456 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + S  +L+    K+  +    S   R+   GLFP+  + N LI+CLCK G+ + A  
Sbjct: 26  SPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAES 85

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            L R+ + C  PN V++N +I+G C    I +A    +++      P    +++++   C
Sbjct: 86  YLKRMPQHC-APNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFC 144

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +T N   A+ +F EM  +    C+PD+V +N ++ GL +   + +A+EL   M  R   P
Sbjct: 145 KTGNVSKAMDVFAEMPAKG---CEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKP 201

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +V+TYN++I G C      EA  L   M    V P  VT+  +I++ CK  ++ +   + 
Sbjct: 202 DVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVF 261

Query: 318 ELMIQRGVNPDTVTYNS---LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           E M + G  P T    S   L++G C   R   A+E+F  M  +G    V +YN L+   
Sbjct: 262 EKMAE-GPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGL 320

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
               K++DA+ L   ML +   P++ TY  L+S L +   + +A KL+  M+    VP  
Sbjct: 321 LSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSL 380

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             +   +  L + G + +A ++++ +    C+  + + N L++G+ + G +  A     +
Sbjct: 381 KIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQ 440

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           +   G +PD  T   ++  LC +G+ D+A  L+ ++
Sbjct: 441 MTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 186/354 (52%), Gaps = 3/354 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PDV ++  +I G  K G   +    L +M +  + PN I YN+LI   C      EA+  
Sbjct: 27  PDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAES- 85

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           +++ M     P+VV++N +I+  CK   ++K    L  M + G  P    Y+S++  FC 
Sbjct: 86  YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 145

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G +S+A ++F  M +KGC  D+ ++N+L++   + +K+ +A  L+R M S   +P V+T
Sbjct: 146 TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 205

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YNT+++GL +   L +A+ L+++M+  DV P   T+ T ID LCK   + +A +VF+ + 
Sbjct: 206 YNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMA 265

Query: 462 NCKCELRIETYNC--LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
              C      Y+   LINGLCK  R   A ++F  ++ +G  P VVT +T++  L    +
Sbjct: 266 EGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAK 325

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           +  A +L   M  +   P+  T+  L+    + ++  +   LL  M  +  V S
Sbjct: 326 LQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPS 379



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 162/372 (43%), Gaps = 54/372 (14%)

Query: 25  SFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSF 84
             G PP P      H +      +  +    K+GN++  +A+  F  M      P + +F
Sbjct: 126 ELGHPPTP------HAY------SSIVQSFCKTGNVS--KAMDVFAEMPAKGCEPDIVNF 171

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
            +LL+ L + ++      LF+ +NS G  PD+   N +I  LCK      A  +L R+ +
Sbjct: 172 NVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQ 231

Query: 145 SCFTPNTVTFN-------------------------------------FLINGLCAEGRI 167
              +P  VT+                                       LINGLC   R 
Sbjct: 232 EDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRP 291

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            EA  +F+++      P VVT+NTL+ GL  T     A++L   M+++  A   P++ TY
Sbjct: 292 GEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPA---PNMFTY 348

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
             +I  LCK   V++A +LL  M+D+   P++  +  L+          +A  L+ EM  
Sbjct: 349 EILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSR 408

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
              Q  V + N +++   + G +D+    L+ M   G+ PD  TY+ L+ G C  G+  +
Sbjct: 409 INCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQ 468

Query: 348 ARELFVSMVSKG 359
           AR+L   +V  G
Sbjct: 469 ARKLVEELVRDG 480


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 255/500 (51%), Gaps = 8/500 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKN----KQYDTVVSLFKRLNSNGLF 113
           G  T+N     F+ +   +   G  S +I+   L K+     + D     F  +   G+ 
Sbjct: 125 GGGTTNSIREIFEFLAASRDRLGFKS-SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVL 183

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P +   N L++   K+  T  A+V+   + R     +  TFN +IN LC EG++ +A   
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
              +      PN+VT+NT+++G C +     A  +   M  +     +PD  TY S+I G
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ---KIEPDSFTYGSLISG 300

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           +CK G +++A ++  +M  + + P+ + YN+LI GFC   +   A     EM+  G+ P 
Sbjct: 301 MCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPT 360

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           + T+N++I+    + + D+   +++ + ++G++PD +TYN L++G+C      +A  L  
Sbjct: 361 MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHD 420

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M++ G +    +Y  L++   K  ++++A  L++++ SE + P VI +N L+ G     
Sbjct: 421 EMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNS 480

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           N+  A +L+  M    V PD  TF T + G C+ G V EA ++F  ++    +    ++N
Sbjct: 481 NVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFN 540

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI+G  + G +K A ++ + +   G  P V+T + ++  LCK  + D A +LL +M +K
Sbjct: 541 TLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSK 600

Query: 534 NCVPSEVTFCTLLRGFVQNN 553
              P + T+ TL+ G  + N
Sbjct: 601 GMTPDDTTYFTLIEGIAKVN 620



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 223/464 (48%), Gaps = 3/464 (0%)

Query: 113 FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
           F    V + LI   C M     AF     +      P   T N L++      R   A  
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           L+ ++       +V TFN +IN LC+    L   K F   +   G   KP++VTYN+I+ 
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCK-EGKLKKAKDFVGHMETSGV--KPNIVTYNTIVH 264

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G C  G V+ A  +L  MK + I P+  TY SLI G C     +EA  +F EM+  G++P
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
             V +N +I+  C  G +D  +   + M+++G++P   TYNSL+    +  R   A  + 
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             +  KG   D  +YNILIN  C+    + A  L+ EML+  I+P+  TY +LL  L + 
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK 444

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
             + +A  L  K+    V+PD   F   IDG C N  V  A ++ + +   K      T+
Sbjct: 445 NRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTF 504

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N ++ G C+ G+++ A +LF  ++ +G  PD ++ +T+I    + G +  A  +  +M  
Sbjct: 505 NTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLD 564

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
               P+ +T+  L++G  +N +      LL +M ++ +   D +
Sbjct: 565 TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTT 608



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 187/364 (51%), Gaps = 6/364 (1%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           SG + + +A+     M + K  P   ++  L++ + K  + +    +F+ +   GL P  
Sbjct: 269 SGRVEAADAI--LTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSA 326

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            + N LI+  C  G    A      +L+   +P   T+N LI+ L  E R  EA  + K+
Sbjct: 327 VIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE 386

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P+ +T+N LING CR  N   A  L +EM+    +  KP   TY S++  L K
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML---ASGIKPTKKTYTSLLHVLSK 443

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              + +A +L  ++    + P+VI +N+LI G C   + K A  L  +M    V PD VT
Sbjct: 444 KNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT 503

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           FN ++  +C++GK+++   L + M +RG+ PD +++N+L+ G+   G I  A  +   M+
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G    V +YN L+   CK+Q+ + A  L +EM+S+ + P   TY TL+ G+ +V N+ 
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV-NIP 622

Query: 417 DALK 420
           D  K
Sbjct: 623 DENK 626



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 154/307 (50%), Gaps = 1/307 (0%)

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           + F+ +I   C   + D+       M ++GV P   T NSL+  F  + R   A  L+  
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M     +  VY++NI+IN  CK+ K++ A      M +  ++P+++TYNT++ G    G 
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A  ++  M+   + PDSFT+ + I G+CK G + EA ++F+ +           YN 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI+G C  G L  A      +  KG  P + T +++IH L  E + D+A  ++ +++ K 
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
             P  +T+  L+ G+ +     K  +L  +M A  +  +  + +S ++ +LSK  + +E 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS-LLHVLSKKNRMKEA 450

Query: 595 LNQFRHL 601
            + F+ +
Sbjct: 451 DDLFKKI 457



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 161/339 (47%), Gaps = 1/339 (0%)

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E L   +DR    + I ++ LI   C ++   EA   F  M + GV P + T N++++  
Sbjct: 137 EFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLF 196

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K  + +    L   M +  +     T+N +++  C  G++ +A++    M + G + ++
Sbjct: 197 LKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNI 256

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN +++  C   +VE A  +   M  ++I P   TY +L+SG+ + G L +A K+ ++
Sbjct: 257 VTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEE 316

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    + P +  + T IDG C  G +  A      +        + TYN LI+ L    R
Sbjct: 317 MVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQR 376

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
              A  +   +Q KG  PD +T + +I+  C+     KA  L  +M A    P++ T+ +
Sbjct: 377 TDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS 436

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           LL    + N+  +   L  K+ +E  V+ D+ + + ++D
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEG-VLPDVIMFNALID 474


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 256/510 (50%), Gaps = 9/510 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P   S+ +++  L ++ +    + +F  +   G+ P+    N +I+   K G     F
Sbjct: 190 PPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGF 249

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  ++L     PN VT+N L++GLC  GR+ E   L  ++   +  P+  T++ L +GL
Sbjct: 250 RLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 309

Query: 197 CRTRNTLVALKLFEEMVNE---FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
            RT  +   L LF E + +    GA       T + +++GLCKDG V KA+++L  +   
Sbjct: 310 TRTGESRTMLSLFAESLKKGVMLGAY------TCSILLNGLCKDGKVAKAEQVLEMLVHT 363

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            + P  + YN+LI G+C V D + A C+F +M    ++PD +T+NA+IN  CK   + K 
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 423

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L+  M + GV+P   T+N+L+D +   G++ +   +   M  KG + DV S+  ++ A
Sbjct: 424 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK+ K+ +AV +  +M+ + + P+   YN+++    + G+   A  L++KM+ + V   
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 543

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   + GLC++  + EA ++   +RN      + +YN +I+  C  G    A +L  
Sbjct: 544 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 603

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +   G  P + T  T++  L   G++     L   M  KN  PS   +  ++  +V+  
Sbjct: 604 EMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCE 663

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             SKV  L  +M+ + +   D   S+  +D
Sbjct: 664 NDSKVASLKKEMSEKGIAFDDTKRSNHELD 693



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 257/526 (48%), Gaps = 40/526 (7%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P ++S  +LL  L    ++  V + F  L + G  PD F  N ++      G    A 
Sbjct: 118 PLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVAL 177

Query: 137 VVLGRILRS--CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
            ++ R+ RS     P+  ++N +I GL   G+  +A ++F ++      PN +T+NT+I+
Sbjct: 178 AMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMID 237

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +     +L ++M+++     KP++VTYN ++ GLC+ G +D+ + L+ +M   +
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGP---KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS 294

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + P+  TY+ L  G     + +    LF E +  GV     T + ++N  CKDGK+ K  
Sbjct: 295 MFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 354

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           ++LE+++  G+ P TV YN+L++G+C V  +  A  +F  M S+  R D  +YN LIN  
Sbjct: 355 QVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK + V  A  L  EM    + PSV T+NTL+      G L     ++  MQ   +  D 
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474

Query: 435 FTFATYIDGLCKNGFVLEAV---------------QVFQAI------------------- 460
            +F + +   CKNG + EAV               QV+ +I                   
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 534

Query: 461 -RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
            +N      I TYN L+ GLC+  ++  A +L + L+++G  PDVV+ +T+I   C +G 
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            DKA +LL +M      P+  T+ TL+       +   +  L  +M
Sbjct: 595 TDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 222/430 (51%), Gaps = 3/430 (0%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D M+   P P + ++ +LL+ L +  + D    L   + S+ +FPD F  ++L + L + 
Sbjct: 253 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 312

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G +     +    L+        T + L+NGLC +G++ +A ++ + L      P  V +
Sbjct: 313 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 372

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           NTLING C+ R+   A  +FE+M +      +PD +TYN++I+GLCK   V KA++L+++
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRH---IRPDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+   ++P+V T+N+LI  +      ++   +  +M   G++ DV++F +++   CK+GK
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +   +L+ MI + V P+   YNS++D +   G   +A  L   M + G    + +YN+
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 549

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L+   C+  ++++A  L   + ++ +RP V++YNT++S     G+   AL+L+ +M    
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P   T+ T +  L   G V +   ++Q + +   E     Y  +++   +        
Sbjct: 610 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 669

Query: 490 KLFHRLQHKG 499
            L   +  KG
Sbjct: 670 SLKKEMSEKG 679



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 193/387 (49%), Gaps = 5/387 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E     D M      P   +++IL   L +  +  T++SLF      G+    +  ++L
Sbjct: 281 DETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSIL 340

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G  + A  VL  ++ +   P TV +N LING C    +  A  +F+++     
Sbjct: 341 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI 400

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ +T+N LINGLC+      A  L  EM     +   P V T+N++ID     G ++K
Sbjct: 401 RPDHITYNALINGLCKLEMVTKAEDLVMEMEK---SGVDPSVETFNTLIDAYGTAGQLEK 457

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              +L  M+ + I  +VI++ S++  FC      EA  +  +M+   V P+   +N++I+
Sbjct: 458 CFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 517

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              + G  ++   L+E M   GV+   VTYN L+ G C   +I  A EL  ++ ++G R 
Sbjct: 518 AYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRP 577

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV SYN +I+A C     + A+ L +EM    IRP++ TY+TL+S L   G + D   L 
Sbjct: 578 DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLY 637

Query: 423 DKMQLNDVVPDSFTFATYIDGL--CKN 447
            +M   +V P S  +   +D    C+N
Sbjct: 638 QQMLHKNVEPSSSIYGIMVDAYVRCEN 664


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 154/541 (28%), Positives = 273/541 (50%), Gaps = 38/541 (7%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS-PGMTSFTILLTMLAKNKQYDTVVSLF 104
           +++  L+   +SG ++  +AV  +D ++++  S P + +   LL+++ K+++ +    ++
Sbjct: 136 ALSHVLHAYAESGFLS--KAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVY 193

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
             +   G   D +   +++  +C  G +  G  ++  R  + C  PN V +N +I G C 
Sbjct: 194 DEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGC-VPNIVFYNTIIGGYCK 252

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM----------- 212
            G I  A  +FK+L +    P + TF T+ING C+  + + + +L EE+           
Sbjct: 253 LGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWF 312

Query: 213 --------------VNEFGAI-------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
                         V+   +I       CKPD+ TYN +I+ LCK+G  + A  LL +  
Sbjct: 313 LNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEAS 372

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + +    ++Y  LI  +C   ++  A  L +++ + G +PD+VT+  +I+     G MD
Sbjct: 373 KKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMD 432

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               +   +I RGV+PD   YN LM G C  GR   A+ LF  M+ +    D Y Y  LI
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLI 492

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +   +    ++A  ++   + + ++  V+ +N ++ G  + G L +AL  +++M    +V
Sbjct: 493 DGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD FT++T IDG  K   +  A+++F+ +   KC+  + TY  LING C  G    A + 
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEET 612

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQ-MDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           F  +Q +  +P+VVT +T+I    KE   ++KA      M    CVP+EVTF  LL+GFV
Sbjct: 613 FKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFV 672

Query: 551 Q 551
           +
Sbjct: 673 K 673



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 236/496 (47%), Gaps = 20/496 (4%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F  ++    K   +     L + +   GL   ++ LN +I+   + G        
Sbjct: 273 PTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAES 332

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  I+ +   P+  T+N LIN LC EG+   AA L  + +        +++  LI   C+
Sbjct: 333 IRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCK 392

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           ++   +A KL  ++  E G  CKPD+VTY  +I GL   G +D A  + +++ DR ++P+
Sbjct: 393 SKEYDIASKLLLQLA-ERG--CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              YN L+ G C    +  AK LF EM+D  + PD   +  +I+   + G  D+  ++  
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFT 509

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           L +++GV  D V +N+++ GFC  G +  A      M  +    D ++Y+ +I+   K Q
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +  A+ ++R+M   + +P+V+TY +L++G    G+   A +   +MQ  D+VP+  T+ 
Sbjct: 570 DMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYT 629

Query: 439 TYIDGLCKNGFVLE-AVQVFQAIRNCKCELRIETYNCLINGLCK--------------MG 483
           T I    K    LE AV  ++ +   KC     T+NCL+ G  K               G
Sbjct: 630 TLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHG 689

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +     + FHR++  G        ++++  LC  G +  A  L   M  K   P  V+F 
Sbjct: 690 QSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFA 749

Query: 544 TLLRGF--VQNNKKSK 557
            +L GF  V N+K+ +
Sbjct: 750 AILHGFCVVGNSKQWR 765



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 141/311 (45%), Gaps = 19/311 (6%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A   F  M+     P    +  L+    ++  +D    +F      G+  D+   N +I 
Sbjct: 469 AKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIK 528

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C+ G+   A   + R+      P+  T++ +I+G   +  +  A ++F+ +    C P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKP 588

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD-GFVDKA 243
           NVVT+ +LING C   +  +A + F+EM +       P+VVTY ++I    K+   ++KA
Sbjct: 589 NVVTYTSLINGFCCQGDFSLAEETFKEMQSR---DLVPNVVTYTTLIRSFAKESSTLEKA 645

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCC---------VDDWKEAKC-LFIE----MMDNG 289
                 M      PN +T+N L+ GF            D +   +  LF E    M  +G
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDG 705

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
                  +N+++   C  G +     L + M+++G +PD V++ +++ GFC+VG   + R
Sbjct: 706 WSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWR 765

Query: 350 EL-FVSMVSKG 359
            + F ++  KG
Sbjct: 766 NMDFRNLDEKG 776



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 138/334 (41%), Gaps = 24/334 (7%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D    A  ++   +SG+   +EA   F   ++      +     ++    ++   D  ++
Sbjct: 484 DAYVYATLIDGFIRSGDF--DEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA 541

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
              R+N   L PD F  + +I+   K    + A  +   + ++   PN VT+  LING C
Sbjct: 542 CMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFC 601

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE--MVNEFGAIC 220
            +G    A   FK++      PNVVT+ TLI    +  +TL     + E  M N+    C
Sbjct: 602 CQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNK----C 657

Query: 221 KPDVVTYNSIIDGLCK----------DGFVDKAK----ELLLQMKDRNINPNVITYNSLI 266
            P+ VT+N ++ G  K          DGF         E   +MK    + +   YNS++
Sbjct: 658 VPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVL 717

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL-LELMIQRGV 325
              C     K A  L   M+  G  PD V+F A+++  C  G   +   +    + ++G+
Sbjct: 718 VCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKGL 777

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
               V Y+ +++       I  A  +  +MV K 
Sbjct: 778 EV-AVRYSRVLEQHLPKAVICEASTILHAMVEKA 810


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 233/419 (55%), Gaps = 3/419 (0%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +IN  CK G    AF +L  +       + +  + LI GLC +GRI EA   FK +    
Sbjct: 5   VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-E 63

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI--CKPDVVTYNSIIDGLCKDGF 239
           C PNV+T+NT++NGLC+       L+LF++M   + A   C+PDV++Y+++ID LCK   
Sbjct: 64  CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 123

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           VDKA E   +M+     PNV+TY+SLI G C VD   EA  L +++    + P  + +NA
Sbjct: 124 VDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNA 183

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           ++N   + GK  +   LL  M ++G   + + +N+++          +A + F  ++  G
Sbjct: 184 VVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 243

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + +V +YN+ ++  CK  KV++A  +  EM+  ++ P VITY++++ G  + G +  A 
Sbjct: 244 KKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD 303

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            +  +M +++ +P   TF T + G  ++    EA +V + + N      ++TYN L++ +
Sbjct: 304 DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV 363

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           C    +++A +++H+++ K   PD  T + +I  LC+  ++D+A + L  MEA N VP+
Sbjct: 364 CGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPN 422



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 144/540 (26%), Positives = 237/540 (43%), Gaps = 96/540 (17%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +T ++    K  Q D    L   +   G+  D+ + + LI  LC+ G    A      + 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN-----VFACDPNVVTFNTLINGLCR 198
             C +PN +T+N ++NGLC   RI E   LF  +         C+P+V++++T+I+ LC+
Sbjct: 62  EEC-SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK-------------- 244
            +    A + F+ M       C P+VVTY+S+IDGLCK   VD+A               
Sbjct: 121 AQRVDKAYEYFKRM---RAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177

Query: 245 ---------------------ELLLQMKDRNIN--------------------------- 256
                                ELLL MK++                              
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237

Query: 257 --------PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
                   PNV+TYN  + G C      EA  + +EM+++ V PDV+T++++I+  CK G
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +MDK + +   M+     P  VT+ +L+ GF    +   A  +   MV+ G    + +YN
Sbjct: 298 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 357

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           +L++  C    VE A+ +Y +M  ++ +P   TY  L+  L +   + +A + +D M+ +
Sbjct: 358 VLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEAD 417

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
           +VVP+       ++ LCK G V EA  V   +                  +CK G    A
Sbjct: 418 NVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICKAGEPDEA 461

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            ++  ++  KG  PD  T   ++  LC   ++D A      M ++ C P  VT+ TLL G
Sbjct: 462 VEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTY-TLLIG 520



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 188/343 (54%), Gaps = 7/343 (2%)

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y ++I+G CK G VD+A ELL +MK+R +  +V+ +++LI G C      EA   F  M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR-----GVNPDTVTYNSLMDGFCL 341
           +    P+V+T+N ++N  CK  ++D+   L + M +R     G  PD ++Y++++D  C 
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             R+ +A E F  M + GC  +V +Y+ LI+  CK  +V++A  L  ++  E + P  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN +++G  + G   + L+L+  M+      +   F   +  L KN    +A Q F+ + 
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +  + TYN  ++GLCK G++  A ++   +      PDV+T S++I   CK G+MD
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           KA+D+   M    C+P  VTF TLL GF + +KKS+    +H+
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSE-HKKSREAFRVHE 342



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 171/352 (48%), Gaps = 22/352 (6%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           +  F  +L  L KN + +     F+RL  +G  P++   N+ ++ LCK G    A+ +L 
Sbjct: 213 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILL 272

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            ++ S  TP+ +T++ +I+G C  GR+ +A  +F ++ V  C P+ VTF TL++G    +
Sbjct: 273 EMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK 332

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            +  A ++ E+MVN  G I  P + TYN ++D +C    V+ A E+  +MK +   P+  
Sbjct: 333 KSREAFRVHEDMVNA-GFI--PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDAN 389

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL--- 317
           TY  LI   C      EAK     M  + V P+    +A++   CK G++D+   +L   
Sbjct: 390 TYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNV 449

Query: 318 ----------------ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
                           E M+ +GV PD  TY +++   C + R+  A   F  M S+GC 
Sbjct: 450 VEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCA 509

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
             + +Y +LI   C     +DA  ++  M++    P   T  TL S L   G
Sbjct: 510 PGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 561



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 204/459 (44%), Gaps = 19/459 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  +F  M  +  +P + +++ L+  L K  + D   SL  +L    + P     N +
Sbjct: 125 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAV 184

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N   + G  S    +L  +    F  N + FN +++ L       +A + F++L     
Sbjct: 185 VNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK 244

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVVT+N  ++GLC+      A ++  EMV    +   PDV+TY+SIIDG CK G +DK
Sbjct: 245 KPNVVTYNVAVHGLCKAGKVDEAYRILLEMVE---SKVTPDVITYSSIIDGFCKAGRMDK 301

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++  +M      P+ +T+ +L+ GF      +EA  +  +M++ G  P + T+N +++
Sbjct: 302 ADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMD 361

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C    ++    +   M ++   PD  TY  L+   C   R+  A+E    M +     
Sbjct: 362 CVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 421

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +    + L+   CK  +V++A  +   ++                 + + G   +A+++I
Sbjct: 422 NGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICKAGEPDEAVEVI 465

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M L  V PD  T+   +  LC    V  A+  F+ + +  C   + TY  LI   C  
Sbjct: 466 EQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSA 525

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                A ++F  +   G  P   T  T+   L   G  D
Sbjct: 526 DMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 126/233 (54%), Gaps = 6/233 (2%)

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y  +IN  CK  +V+ A  L  EM    ++  V+ ++TL+ GL + G + +AL+    M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR-----NCKCELRIETYNCLINGLCK 481
             +  P+  T+ T ++GLCK   + E +++F  +      +  CE  + +Y+ +I+ LCK
Sbjct: 62  -EECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             R+  A + F R++  G  P+VVT S++I  LCK  ++D+A  LL+ ++ ++ VP  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           +  ++ GF +  K S+ + LL  M  +   ++ +  ++ +  L   D++ + C
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKAC 233


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 245/463 (52%), Gaps = 5/463 (1%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F D  +    ++ R ++G++  + A+   D M      PG+ ++  +L  L K++++D  
Sbjct: 189 FPDVVTHNVLIDARFRAGDV--DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKA 246

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
             +F+ ++   + PD+   N+LI   C++G    A      +     TP+ V+F+ LI  
Sbjct: 247 KEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGL 306

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
               G +  A    +++      P+ V +  +I G CR  +   AL++ +EMV  FG  C
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG-FG--C 363

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PDVVTYN++++GLCK   +  A++LL +M++R + P++ T+ +LI G+C   +++ A  
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQ 423

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF  ++   ++PDVVT+N++I+  C+ G + K N L + M  R + P+ +TY+ L+D  C
Sbjct: 424 LFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHC 483

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G++  A      MV KG   ++ +YN +I   C+   V+      ++M  + + P +I
Sbjct: 484 EKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLI 543

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T+NTL+ G  +  N+  A  + + M+   V PD+ T+   I+G  + G + +A +VF+ +
Sbjct: 544 TFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGM 603

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            +   E    TY  LING    G  K A +L   + H+G  PD
Sbjct: 604 GDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 241/492 (48%), Gaps = 3/492 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++    K  ++D   ++   +    +FPD+   N+LI+   + G    A  ++  +
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P  VT+N ++ GLC   R  +A  +F+ ++  +  P+V +FN LI G CR    
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A+K ++EM + +     PDVV+++ +I    + G +D A   L +MK   + P+ + Y
Sbjct: 279 KEAVKFYKEMQHRY---VTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIY 335

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             +I GFC      EA  +  EM+  G  PDVVT+N ++N  CK  ++    +LL  M +
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEE 395

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RGV PD  T+ +L+ G+C  G    A +LF +++ +  R DV +YN LI+  C+   +  
Sbjct: 396 RGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAK 455

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+ +M +  I P+ ITY+ L+    + G + DA   +D+M     +P+  T+ + I 
Sbjct: 456 ANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIK 515

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G C++G V +  Q  Q +R       + T+N LI+G  K   +  A  +F+ ++ +   P
Sbjct: 516 GYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRP 575

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D VT + +I+   ++G M  A  +   M      P   T+ +L+ G V      +   L 
Sbjct: 576 DAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLH 635

Query: 563 HKMAAEKLVVSD 574
            +M        D
Sbjct: 636 DEMIHRGFAPDD 647



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 245/491 (49%), Gaps = 5/491 (1%)

Query: 64  EAVYFFDCMIKMK-PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           EA   F  ++  + P P   S   LL +L++          ++ + S+    + + LN++
Sbjct: 105 EAFEAFRLLLDHRVPVPASAS-NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIM 163

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK     GA  V+  + + C  P+ VT N LI+     G +  A  L   +     
Sbjct: 164 VHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGL 223

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P +VT+N+++ GLC+ R    A ++F  M         PDV ++N +I G C+ G V +
Sbjct: 224 KPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQ---CSVAPDVRSFNILIGGFCRVGEVKE 280

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +   +M+ R + P+V++++ LI  F    +   A     EM   G+ PD V +  +I 
Sbjct: 281 AVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIG 340

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ G M +  R+ + M+  G  PD VTYN+L++G C   R+  A +L   M  +G   
Sbjct: 341 GFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTP 400

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ ++  LI+  C+    E+A+ L+  +L +R+RP V+TYN+L+ G+ + G+L  A +L 
Sbjct: 401 DLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELW 460

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D M   +++P+  T++  ID  C+ G V +A      +        I TYN +I G C+ 
Sbjct: 461 DDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRS 520

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G +K   +   +++     PD++T +T+IH   KE  M  A ++   ME +   P  VT+
Sbjct: 521 GNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTY 580

Query: 543 CTLLRGFVQNN 553
             ++ GF +  
Sbjct: 581 NMIINGFSEQG 591



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 245/527 (46%), Gaps = 39/527 (7%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           ++   P+P    F +L+    ++++       F+ L  + +       N L+  L + G 
Sbjct: 78  LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGW 137

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A      +L S    N  T N +++  C       A  +  ++      P+VVT N 
Sbjct: 138 PHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNV 197

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+   R  +   A+ L + M N      KP +VTYNS++ GLCK    DKAKE+   M 
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRG---LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMD 254

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             ++ P+V ++N LI GFC V + KEA   + EM    V PDVV+F+ +I    + G+MD
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMD 314

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
                L  M   G+ PD V Y  ++ GFC  G +S A  +   MV  G            
Sbjct: 315 HAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFG------------ 362

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
                        CL          P V+TYNTLL+GL +   L DA KL+++M+   V 
Sbjct: 363 -------------CL----------PDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD  TF T I G C+ G    A+Q+F  +   +    + TYN LI+G+C+ G L  A +L
Sbjct: 400 PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           +  +  +  +P+ +T S +I   C++GQ++ A   L +M  K  +P+  T+ ++++G+ +
Sbjct: 460 WDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCR 519

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           +    K    L KM  +  V  DL   + ++    K++      N F
Sbjct: 520 SGNVKKGQQFLQKMRQDN-VFPDLITFNTLIHGYIKEENMHGAFNVF 565


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/544 (29%), Positives = 265/544 (48%), Gaps = 27/544 (4%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  F+ +  +   P + +  ++L  + K+K+ + V SLF+ ++  G+ P++   N+LIN
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 241

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LC  G    A  +L ++  + F P  VT+N L+N  C +GR   A  L   +     + 
Sbjct: 242 GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEA 301

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T+N  I+ LC    +  A  L ++M  E   +  P+ VTYN++I+G  K+G +  A 
Sbjct: 302 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKE---MISPNEVTYNTLINGFVKEGKIGVAA 358

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD----------------- 287
           ++  +M   +++PN +TYN+LI G C V D++EA  L   M                   
Sbjct: 359 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKV 418

Query: 288 ------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
                 NG   D  T N +++  C+DGK+ +  + L  M + G+ P+++TY+ +++G+  
Sbjct: 419 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGS 478

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           +G    A   F  M+  G     ++Y  L+   CK   + +A      +         + 
Sbjct: 479 IGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVM 538

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAI 460
           YNTLL+   + GNL +A+ L DKM  N+V+PDS+T+++ + GLC+ G  + AV +F  A+
Sbjct: 539 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 598

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                      Y CL++GL K G  K A   F  +  KG  PD V  + +I    + GQM
Sbjct: 599 GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQM 658

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
            KAND    M      P+  T+  LL GF +     + + L   M  E +    L+  S 
Sbjct: 659 MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSL 718

Query: 581 VVDL 584
           ++ L
Sbjct: 719 ILGL 722



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 245/540 (45%), Gaps = 33/540 (6%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  LL    K  +Y   + L   +   G+  D+   N+ I+ LC    ++ A+++
Sbjct: 266 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 325

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L ++ +   +PN VT+N LING   EG+I  AA++F +++ F   PN VT+N LI G C 
Sbjct: 326 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 385

Query: 199 TRNTLVALKLFEEM------VNEFGAICK--------------PDVVTYNSIIDGLCKDG 238
             +   AL+L + M      +NE G + +               D  T N ++  LC+DG
Sbjct: 386 VGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDG 445

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            + +A++ L  M    + PN ITY+ +I G+  + D   A   F +M+  G  P   T+ 
Sbjct: 446 KLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYG 505

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           +++   CK G + +  + L  +       D+V YN+L+   C  G +  A  LF  MV  
Sbjct: 506 SLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 565

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGD 417
               D Y+Y+ L+   C+  K   AVCL+   +    + P+ + Y  L+ GL + G+   
Sbjct: 566 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 625

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A    ++M      PD+  F   ID   + G +++A   F  +R       + TYN L++
Sbjct: 626 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 685

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG------------QMDKAND 525
           G  K   L     L+  +  +G  PD +T  ++I  L K G             M+++  
Sbjct: 686 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTV 745

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           +L +M     +P    + TL+ G  +         L  +M A      +++ S+ V  LL
Sbjct: 746 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 805



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 244/538 (45%), Gaps = 49/538 (9%)

Query: 90  MLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP 149
           +L K + YD+  S+ + L                   C+MGI  G+  + G ++ +    
Sbjct: 121 ILVKARMYDSAKSILRHL-------------------CQMGI--GSKSIFGALMDTYPLC 159

Query: 150 NTV--TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           N++   F+ LI     EG I  A   F+ + +    P+V T N ++  + + + T +   
Sbjct: 160 NSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWS 219

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           LF EM ++   IC P+V T+N +I+GLC +G + KA  LL QM++    P ++TYN+L+ 
Sbjct: 220 LFREMSDK--GIC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLN 276

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            +C    +K A  L   M+  G++ DV T+N  I+  C + +  K   LL+ M +  ++P
Sbjct: 277 WYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISP 336

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + VTYN+L++GF   G+I  A ++F  M       +  +YN LI  +C     E+A+ L 
Sbjct: 337 NEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLL 396

Query: 388 REMLSERIR-----------------------PSVITYNTLLSGLFQVGNLGDALKLIDK 424
             M +  +R                           T N L+S L + G LG+A K +  
Sbjct: 397 DHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 456

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    +VP+S T+   I+G    G  L A   F  +  C       TY  L+ GLCK G 
Sbjct: 457 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 516

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           L  A K  +RL +     D V  +T++   CK G + +A  L   M   N +P   T+ +
Sbjct: 517 LVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 576

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           LL G  +  K    V L         +  +  + + +VD LSK    +     F  ++
Sbjct: 577 LLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 634



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 233/500 (46%), Gaps = 17/500 (3%)

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
            + ++  +N NG   D F  N+L++ LC+ G    A   L  + R    PN++T++ +IN
Sbjct: 415 AMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIIN 474

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
           G  + G  + A   F  +      P+  T+ +L+ GLC+  N + A K    +    GA+
Sbjct: 475 GYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV 534

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
              D V YN+++   CK G + +A  L  +M   N+ P+  TY+SL+ G C       A 
Sbjct: 535 ---DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV 591

Query: 280 CLFIEMMDNGVQ-PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           CLF   M  G   P+ V +  +++   K G         E M+++G  PDTV +N+++D 
Sbjct: 592 CLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS 651

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
               G++ +A + F +M   G   ++ +YNIL++   K Q +   + LY  M+ E I P 
Sbjct: 652 CSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPD 711

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQL------------NDVVPDSFTFATYIDGLCK 446
            +T+++L+ GL + G     +KL+ KM +            N V+P    + T I+G+C+
Sbjct: 712 KLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCR 771

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G +  A ++   +            + ++ GL   G+ + A  +   +     +P + T
Sbjct: 772 VGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIAT 831

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            +T++H  C++ ++ +A  L   ME        V +  L+ G   N   +    L  +M 
Sbjct: 832 FTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR 891

Query: 567 AEKLVVSDLSLSSKVVDLLS 586
              L   +++  + +VD +S
Sbjct: 892 HRDL-CPNITTYAVLVDAIS 910



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 232/532 (43%), Gaps = 59/532 (11%)

Query: 56  KSGNITSNEAVY-FFDCMIKMKPSPGMTSFT--ILLTMLAKNKQYDTVVSLFKRLNSNGL 112
           + GN+T    VY   +C        G   FT  +L++ L ++ +          ++  GL
Sbjct: 408 EHGNVTEAMKVYAVMNC-----NGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGL 462

Query: 113 FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
            P+    + +IN    +G    AF     +++    P+  T+  L+ GLC  G ++EA +
Sbjct: 463 VPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKK 522

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
              +L+      + V +NTL+   C++ N   A+ LF++MV        PD  TY+S++ 
Sbjct: 523 FLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN---VLPDSYTYSSLLT 579

Query: 233 GLCKDGFVDKAKELL-LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           GLC+ G    A  L    M    + PN + Y  L+ G       K A   F EMM  G  
Sbjct: 580 GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 639

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PD V FNA+I+   + G+M K N     M   GV P+  TYN L+ GF     + R   L
Sbjct: 640 PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 699

Query: 352 FVSMVSKGCRHDVYSYNILI----NANCKDQKV--------EDAVCLYREMLSERIRPSV 399
           + +M+ +G   D  +++ LI     +   D  V        E++  +  EML   + P  
Sbjct: 700 YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKH 759

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQL-------------------------------- 427
             Y TL++G+ +VG++  A KL D+M+                                 
Sbjct: 760 AQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDH 819

Query: 428 ---NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
                ++P   TF T +   C++  + EA+++   +  C  +L +  YN LI G+C  G 
Sbjct: 820 MLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGD 879

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
              A +L+  ++H+   P++ T + ++  +     + +   LL D++ +  +
Sbjct: 880 SAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 931


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 255/503 (50%), Gaps = 28/503 (5%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +F+I    L +  + D  +++ + +  +G  PD  +   +I+ LC  G  + A  +
Sbjct: 170 PTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATL 229

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC- 197
           L  +     + +  TFN +++GLC  GR+ EAARL  ++ +  C PN +T+  L+ GLC 
Sbjct: 230 LDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCL 289

Query: 198 -------RTR------------NTLVA-------LKLFEEMVNEFGAI-CKPDVVTYNSI 230
                  RT             NT++        LK   E+    G+  C PD  TY+ +
Sbjct: 290 ASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSIL 349

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           I GLCK G +  A +LL +M+D+   P+++TY  L+  FC    W   + +   M D G+
Sbjct: 350 IHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGL 409

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
             ++  +N MI   CKD +MD   R ++ M  +G  PD  TYN+++   C   ++  A  
Sbjct: 410 SMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEY 469

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           LF +++ +G   +  +YN LI+A  ++   +DA+ L  +M+       +++YN L+  L 
Sbjct: 470 LFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALC 529

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + GN+  ++ L+ +M    + P++ ++   I  LCK   V +A+++ + + N +    I 
Sbjct: 530 RDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIV 589

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TYN LINGLCKMG +  A  L  +L ++    D++T + +I W CK   +  A+ LL   
Sbjct: 590 TYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRA 649

Query: 531 EAKNCVPSEVTFCTLLRGFVQNN 553
                 P+E T+  +++ FV+ +
Sbjct: 650 VTSGITPNERTWGIMVQNFVRKS 672



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 260/513 (50%), Gaps = 11/513 (2%)

Query: 59  NITSNEAVYFFDCMI-KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGLFPDL 116
           ++    A++  D +  +   SP   S+  +L   A+   +  V+SL++R+ + + + P  
Sbjct: 113 SLAPGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTT 172

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           F  ++    LC++G    A  +L  + R    P+TV +  +I+ LCA+G + EAA L  +
Sbjct: 173 FTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDE 232

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           + +  C  +V TFN +++GLC       A +L + M+      C P+ +TY  ++ GLC 
Sbjct: 233 MFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRG---CVPNAITYGFLLKGLCL 289

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD-WKEAKCLFIEMMDNGVQPDVV 295
              V++A+ +L ++ + N    V+ +N++I G C +D   KEA  L+  M   G  PD  
Sbjct: 290 ASQVEEARTMLGRVPELN----VVLFNTVI-GRCLLDGKLKEAAELYETMGSKGCPPDAH 344

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T++ +I+  CK G++    +LL  M  +G  P  VTY  L+  FC  G     R +   M
Sbjct: 345 TYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVM 404

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             KG   ++  YN +I A CKD++++DA+   +EM S+  +P + TYNT++  L     +
Sbjct: 405 SDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQM 464

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A  L + +    VV ++ T+ T I  L +NG   +A+ +   +    C L I +YN L
Sbjct: 465 EEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGL 524

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I  LC+ G +  +  L   +  KG  P+ V+ + +I  LCK  ++  A +L  +M  +  
Sbjct: 525 IKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQEL 584

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            P  VT+ TL+ G  +       + LL K+  E
Sbjct: 585 TPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 617



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 218/476 (45%), Gaps = 49/476 (10%)

Query: 163 AEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           A GR   A  L  +L + FA  P+  ++NT++    R       L L+  MV+       
Sbjct: 115 APGR---ALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHR--DRVP 169

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P   T++     LC+ G  D+A  +L  M      P+ + Y ++I   C      EA  L
Sbjct: 170 PTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATL 229

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             EM   G   DV TFN +++  C  G++ +  RL++ M+ RG  P+ +TY  L+ G CL
Sbjct: 230 LDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCL 289

Query: 342 VGRISRAR-------------------------------ELFVSMVSKGCRHDVYSYNIL 370
             ++  AR                               EL+ +M SKGC  D ++Y+IL
Sbjct: 290 ASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSIL 349

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+  CK  ++  A+ L REM  +   PS++TY  LL    + G   +   +++ M    +
Sbjct: 350 IHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGL 409

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
             +   +   I  +CK+  + +A++  Q +++   +  I TYN +I  LC   +++ A  
Sbjct: 410 SMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEY 469

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           LF  L H+G + + +T +T+IH L + G    A  L  DM    C    V++  L++   
Sbjct: 470 LFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALC 529

Query: 551 QNNKKSKVVVLLHKMAAE---------KLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
           ++    + ++LL +MA +          L++S+L  + +V D L   K   E LNQ
Sbjct: 530 RDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSK---EMLNQ 582



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 155/342 (45%), Gaps = 34/342 (9%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   ++ M      P   +++IL+  L K  +  + + L + +   G  P +    +L+
Sbjct: 326 EAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILL 385

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C+ G+      +L  +     + N   +N +I  +C + R+ +A R  +++      
Sbjct: 386 HSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYK 445

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI------------------------ 219
           P++ T+NT+I  LC       A  LFE +++E G +                        
Sbjct: 446 PDICTYNTIIYHLCNNNQMEEAEYLFENLLHE-GVVANAITYNTLIHALLRNGSWQDAIS 504

Query: 220 ---------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                    C  D+V+YN +I  LC+DG VD++  LL +M ++ I PN ++YN LI   C
Sbjct: 505 LANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELC 564

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                ++A  L  EM++  + PD+VT+N +IN  CK G M     LLE +    V+ D +
Sbjct: 565 KTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADII 624

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
           TYN L+   C    +  A  L    V+ G   +  ++ I++ 
Sbjct: 625 TYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQ 666



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 124/240 (51%), Gaps = 3/240 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ F   M      P + ++  ++  L  N Q +    LF+ L   G+  +    N L
Sbjct: 430 DDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTL 489

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L + G    A  +   ++    + + V++N LI  LC +G +  +  L  ++     
Sbjct: 490 IHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGI 549

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN V++N LI+ LC+TR    AL+L +EM+N+      PD+VTYN++I+GLCK G++  
Sbjct: 550 KPNNVSYNLLISELCKTRRVRDALELSKEMLNQE---LTPDIVTYNTLINGLCKMGWMHA 606

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL ++ + +++ ++ITYN LI   C      +A  L    + +G+ P+  T+  M+ 
Sbjct: 607 ALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQ 666



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 3/215 (1%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           H   N    EA Y F+ ++         ++  L+  L +N  +   +SL   +  +G   
Sbjct: 457 HLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSL 516

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D+   N LI  LC+ G    + ++L  +      PN V++N LI+ LC   R+ +A  L 
Sbjct: 517 DIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELS 576

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           K++      P++VT+NTLINGLC+      AL L E++ NE       D++TYN +I   
Sbjct: 577 KEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNED---VHADIITYNILISWH 633

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           CK   +  A  LL +     I PN  T+  ++  F
Sbjct: 634 CKARLLHDASMLLNRAVTSGITPNERTWGIMVQNF 668


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 245/450 (54%), Gaps = 5/450 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +FT+L T L +  ++  VV LF  L S G+        L+++ LC  G+ + A  ++ R 
Sbjct: 21  AFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV-RE 79

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L   +TP    +N +I GLC   R+M+A ++ +K+   +  PNV T+  L+NGLCR+  T
Sbjct: 80  LSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKT 139

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            +A ++F+EM       CKP+ +TY ++I  L + G +D+A  ++++ +   +  +VIT 
Sbjct: 140 KLAREVFQEMKRNG---CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITC 196

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            +++ G C      +A     EM   GV+P+ VT++ +++   + G++D+V R  E    
Sbjct: 197 TTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKA 256

Query: 323 R-GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           R G + +   Y   +D  C  G + RAR+    +   G   DV +Y++LIN   +  + +
Sbjct: 257 RKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFD 316

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            ++ L  +M    ++P V+TY+TL++ L +     DA +L++ M+     P+  T+ + +
Sbjct: 317 ASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVM 376

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCK+G + E  +V++ +   +C   + TY+ ++NGL K G L +A KLF  ++     
Sbjct: 377 DGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREG 436

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           PD    S +I  LC+ G++++A  +   ME
Sbjct: 437 PDAAAYSMVITSLCRAGKLEEACGMYHGME 466



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 7/385 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A    + M++    P + ++TILL  L ++ +      +F+ +  NG  P+      LI
Sbjct: 106 DAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLI 165

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTP-NTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
             L + G    A  V+    RS   P + +T   ++ GLC   R+ +A +  +++     
Sbjct: 166 QHLSRAGEIDEALRVMIE-QRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGV 224

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VT++ L++G  +       ++ FEE     G     +   Y   +D LCK G++D+
Sbjct: 225 RPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSL--EAAAYPGYLDALCKAGYLDR 282

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++ + +++   + P+V+TY+ LI  F     +  +  L  +M  NGV+PDVVT++ +IN
Sbjct: 283 ARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLIN 342

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+ K     RLLELM   G  P+ VTYNS+MDG C  G++     ++  M+   C  
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSP 402

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV +Y+I++N   K   ++ AV L+  + S R  P    Y+ +++ L + G L +A  + 
Sbjct: 403 DVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMY 462

Query: 423 DKMQLNDVVPDSF--TFATYIDGLC 445
             M++  V  D+     A  +  LC
Sbjct: 463 HGMEVT-VAGDNICRALAGLVAALC 486



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 157/353 (44%), Gaps = 38/353 (10%)

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           AK L   +++ GV+ D   F  +     +  K  +V RL  L+  RGV     TY  ++D
Sbjct: 3   AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C  G  ++A EL V  +S      ++ YN +I   C+  +V DA  +  +M+ E I P
Sbjct: 63  GLCGAGMANQALEL-VRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +V TY  LL+GL +      A ++  +M+ N   P+  T+ T I  L + G + EA++V 
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW---- 513
              R+ +    + T   ++ GLCK  RL  A K    ++  G  P+ VT S ++H     
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241

Query: 514 --------------------------------LCKEGQMDKANDLLLDMEAKNCVPSEVT 541
                                           LCK G +D+A   + ++     VP  VT
Sbjct: 242 GELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVT 301

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           +  L+  F +  +    + LL  M     V  D+   S ++++L K++K+++ 
Sbjct: 302 YSMLINTFARAGQFDASLELLEDMRRNG-VKPDVVTYSTLINVLCKERKFQDA 353


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 255/504 (50%), Gaps = 8/504 (1%)

Query: 54  RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKN----KQYDTVVSLFKRLNS 109
           R   G  T+N     F+ +   +   G  S +I+   L K+     + D     F  +  
Sbjct: 121 RQALGGGTTNSIREIFEFLAASRDRLGFKS-SIVFDYLIKSCCDMNRADEAFECFYTMKE 179

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ P +   N L++   K+  T  A+V+   + R     +  TFN +IN LC EG++ +
Sbjct: 180 KGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKK 239

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A      +      PN+VT+NT+++G C +     A  +   M  +     +PD  TY S
Sbjct: 240 AKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ---KIEPDSFTYGS 296

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I G+CK G +++A ++  +M  + + P+ + YN+LI GFC   +   A     EM+  G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           + P + T+N++I+    + + D+   +++ + ++G++PD +TYN L++G+C      +A 
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            L   M++ G +    +Y  L++   K  ++++A  L++++ SE + P  I +N L+ G 
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGH 476

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
               N+  A +L+  M    V PD  TF T + G C+ G V EA ++F  ++    +   
Sbjct: 477 CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDH 536

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            ++N LI+G  + G +K A ++ + +   G  P V+T + ++  LCK  + D A +LL +
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKE 596

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNN 553
           M +K   P + T+ TL+ G  + N
Sbjct: 597 MVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 224/464 (48%), Gaps = 3/464 (0%)

Query: 113 FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
           F    V + LI   C M     AF     +      P   T N L++      R   A  
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           L+ ++       +V TFN +IN LC+    L   K F   +   G   KP++VTYN+I+ 
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCK-EGKLKKAKDFVGHMETSGV--KPNIVTYNTIVH 264

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G C  G V+ A  +L  MK + I P+  TY SLI G C     +EA  +F EM+  G++P
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
             V +N +I+  C  G +D  +   + M+++G++P   TYNSL+    +  R   A  + 
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             +  KG   D  +YNILIN  C+    + A  L+ EML+  I+P+  TY +LL  L + 
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK 444

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
             + +A  L  K+    V+PD+  F   IDG C N  V  A ++ + +   K      T+
Sbjct: 445 NRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTF 504

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N ++ G C+ G+++ A +LF  ++ +G  PD ++ +T+I    + G +  A  +  +M  
Sbjct: 505 NTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLD 564

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
               P+ +T+  L++G  +N +      LL +M ++ +   D +
Sbjct: 565 TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTT 608



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 186/364 (51%), Gaps = 6/364 (1%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           SG + + +A+     M + K  P   ++  L++ + K  + +    +F+ +   GL P  
Sbjct: 269 SGRVEAADAI--LTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSA 326

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            + N LI+  C  G    A      +L+   +P   T+N LI+ L  E R  EA  + K+
Sbjct: 327 VIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE 386

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P+ +T+N LING CR  N   A  L +EM+    +  KP   TY S++  L K
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML---ASGIKPTKKTYTSLLHVLSK 443

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              + +A +L  ++    + P+ I +N+LI G C   + K A  L  +M    V PD VT
Sbjct: 444 KNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT 503

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           FN ++  +C++GK+++   L + M +RG+ PD +++N+L+ G+   G I  A  +   M+
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G    V +YN L+   CK+Q+ + A  L +EM+S+ + P   TY TL+ G+ +V N+ 
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV-NIP 622

Query: 417 DALK 420
           D  K
Sbjct: 623 DENK 626



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 154/307 (50%), Gaps = 1/307 (0%)

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           + F+ +I   C   + D+       M ++GV P   T NSL+  F  + R   A  L+  
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M     +  VY++NI+IN  CK+ K++ A      M +  ++P+++TYNT++ G    G 
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A  ++  M+   + PDSFT+ + I G+CK G + EA ++F+ +           YN 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI+G C  G L  A      +  KG  P + T +++IH L  E + D+A  ++ +++ K 
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
             P  +T+  L+ G+ +     K  +L  +M A  +  +  + +S ++ +LSK  + +E 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS-LLHVLSKKNRMKEA 450

Query: 595 LNQFRHL 601
            + F+ +
Sbjct: 451 DDLFKKI 457



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 160/339 (47%), Gaps = 1/339 (0%)

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E L   +DR    + I ++ LI   C ++   EA   F  M + GV P + T N++++  
Sbjct: 137 EFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLF 196

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K  + +    L   M +  +     T+N +++  C  G++ +A++    M + G + ++
Sbjct: 197 LKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNI 256

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN +++  C   +VE A  +   M  ++I P   TY +L+SG+ + G L +A K+ ++
Sbjct: 257 VTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEE 316

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    + P +  + T IDG C  G +  A      +        + TYN LI+ L    R
Sbjct: 317 MVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQR 376

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
              A  +   +Q KG  PD +T + +I+  C+     KA  L  +M A    P++ T+ +
Sbjct: 377 TDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS 436

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           LL    + N+  +   L  K+ +E  V+ D  + + ++D
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEG-VLPDAIMFNALID 474


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 256/510 (50%), Gaps = 9/510 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P   S+ +++  L ++ +    + +F  +   G+ P+    N +I+   K G     F
Sbjct: 12  PPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGF 71

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  ++L     PN VT+N L++GLC  GR+ E   L  ++   +  P+  T++ L +GL
Sbjct: 72  RLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 131

Query: 197 CRTRNTLVALKLFEEMVNE---FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
            RT  +   L LF E + +    GA       T + +++GLCKDG V KA+++L  +   
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGA------YTCSILLNGLCKDGKVAKAEQVLEMLVHT 185

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            + P  + YN+LI G+C V D + A C+F +M    ++PD +T+NA+IN  CK   + K 
Sbjct: 186 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 245

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L+  M + GV+P   T+N+L+D +   G++ +   +   M  KG + DV S+  ++ A
Sbjct: 246 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 305

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK+ K+ +AV +  +M+ + + P+   YN+++    + G+   A  L++KM+ + V   
Sbjct: 306 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 365

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   + GLC++  + EA ++   +RN      + +YN +I+  C  G    A +L  
Sbjct: 366 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 425

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +   G  P + T  T++  L   G++     L   M  KN  PS   +  ++  +V+  
Sbjct: 426 EMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCE 485

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             SKV  L  +M+ + +   D   S+  +D
Sbjct: 486 NDSKVASLKKEMSEKGIAFDDTKRSNHELD 515



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 222/430 (51%), Gaps = 3/430 (0%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D M+   P P + ++ +LL+ L +  + D    L   + S+ +FPD F  ++L + L + 
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G +     +    L+        T + L+NGLC +G++ +A ++ + L      P  V +
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           NTLING C+ R+   A  +FE+M +      +PD +TYN++I+GLCK   V KA++L+++
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRH---IRPDHITYNALINGLCKLEMVTKAEDLVME 251

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+   ++P+V T+N+LI  +      ++   +  +M   G++ DV++F +++   CK+GK
Sbjct: 252 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 311

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +   +L+ MI + V P+   YNS++D +   G   +A  L   M + G    + +YN+
Sbjct: 312 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 371

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L+   C+  ++++A  L   + ++ +RP V++YNT++S     G+   AL+L+ +M    
Sbjct: 372 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 431

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P   T+ T +  L   G V +   ++Q + +   E     Y  +++   +        
Sbjct: 432 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 491

Query: 490 KLFHRLQHKG 499
            L   +  KG
Sbjct: 492 SLKKEMSEKG 501



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 193/387 (49%), Gaps = 5/387 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E     D M      P   +++IL   L +  +  T++SLF      G+    +  ++L
Sbjct: 103 DETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSIL 162

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G  + A  VL  ++ +   P TV +N LING C    +  A  +F+++     
Sbjct: 163 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI 222

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ +T+N LINGLC+      A  L  EM     +   P V T+N++ID     G ++K
Sbjct: 223 RPDHITYNALINGLCKLEMVTKAEDLVMEMEK---SGVDPSVETFNTLIDAYGTAGQLEK 279

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              +L  M+ + I  +VI++ S++  FC      EA  +  +M+   V P+   +N++I+
Sbjct: 280 CFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 339

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              + G  ++   L+E M   GV+   VTYN L+ G C   +I  A EL  ++ ++G R 
Sbjct: 340 AYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRP 399

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV SYN +I+A C     + A+ L +EM    IRP++ TY+TL+S L   G + D   L 
Sbjct: 400 DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLY 459

Query: 423 DKMQLNDVVPDSFTFATYIDGL--CKN 447
            +M   +V P S  +   +D    C+N
Sbjct: 460 QQMLHKNVEPSSSIYGIMVDAYVRCEN 486


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 252/492 (51%), Gaps = 3/492 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + + + +L  L + +Q+   + LF  + S+GL PD++V   ++  LC++     A  V
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +GR+  S    +  T+N  I GLC   R+ EA  +   L+      +V T+ TL+ GLC+
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                   ++  EM+ EFG +  P     ++++DGL K G +  A +L+ ++K   + P+
Sbjct: 298 VEEFEAGEEMMNEMI-EFGFV--PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           +  YN+LI   C      EA+ LF  M   G+ P+ VT++ +I+  CK GK+D     L 
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M + G+      Y+SL+ G C +G++  A+ LF  M++ G + +V  Y  LI+  CK+ 
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           ++ +A  LY EM  + I P+  T+  L+SGL     + +A KL  +M   +V+P+  T+ 
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I+G CK G  + A ++   +          TY  LI+GLC  GR+  A +  + LQ +
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
               + +  S ++H  CKEG++D A D   +M  +      V +  L+ G ++   +  +
Sbjct: 595 QQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSI 654

Query: 559 VVLLHKMAAEKL 570
           + LL +M  + L
Sbjct: 655 IDLLKQMHDQGL 666



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 249/494 (50%), Gaps = 4/494 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI+    P   + + L+  L K     +   L  ++   G+ P LFV N LIN +CK G 
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   +      PN VT++ LI+  C  G++  A     K+        V  +++
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+G C+      A  LF+EM+       KP+VV Y S+I G CK+G +  A  L  +M 
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANG---LKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + I+PN  T+ +LI G C  +   EA  LF EM++  V P+ VT+N +I  +CK+G   
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL+ M+++G+ PDT TY  L+ G C  GR+S ARE    +  +  + +   ++ L+
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALL 607

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CK+ +++DA+   REML   +   ++ Y+ L+ G+ +  +    + L+ +M    + 
Sbjct: 608 HGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLR 667

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD+  + T ID   K G +  A  ++  + +  C   + TY  LINGLCK+G +  A  L
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELL 727

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              +     +P+  T +  + +L  EG ++KA   L D+  +  + + VT+  L+RGF +
Sbjct: 728 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCK 786

Query: 552 NNKKSKVVVLLHKM 565
             +  +   +L  M
Sbjct: 787 LGRIQEAAEVLVNM 800



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 248/484 (51%), Gaps = 4/484 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A++F   M ++     +  ++ L++   K  +     SLF  + +NGL P++ +   LI+
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G    AF +   +     +PNT TF  LI+GLC   R+ EA +LF ++  +   P
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N VT+N LI G C+  NT+ A +L +EMV E G +  PD  TY  +I GLC  G V +A+
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMV-EKGLV--PDTYTYRPLISGLCSTGRVSEAR 585

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E +  ++      N + +++L+ G+C      +A     EM+  GV  D+V ++ +I   
Sbjct: 586 EFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGI 645

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            +      +  LL+ M  +G+ PD V Y +++D     G +  A  L+  MVS+GC  +V
Sbjct: 646 LRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNV 705

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y  LIN  CK   ++ A  L REML+    P+  TY   L  L   GN+  A++L D 
Sbjct: 706 VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDV 765

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           + L   + ++ T+   I G CK G + EA +V   + +        +Y+ +I   C+ G 
Sbjct: 766 L-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGD 824

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           LK A KL+  + ++G  PD V  + +I+  C  G++ KA +L  DM  +   P+  T+ +
Sbjct: 825 LKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNS 884

Query: 545 LLRG 548
           L+ G
Sbjct: 885 LIHG 888



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/542 (29%), Positives = 260/542 (47%), Gaps = 47/542 (8%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKP---SPGMTSFTILLTMLAKNKQYDTVV 101
            +++  ++   K GNI S      FD + K+K    +P +  +  L+  + K+ + D   
Sbjct: 321 AAVSNLVDGLRKKGNIGSA-----FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI------------------- 142
           SLF  +   GLFP+    ++LI+  CK G    A   LG++                   
Sbjct: 376 SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGH 435

Query: 143 -----LRSC-----------FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
                LR+              PN V +  LI+G C EG +  A RL+ ++      PN 
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
            TF  LI+GLC       A KLF EMV E+  I  P+ VTYN +I+G CK+G   +A EL
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMV-EWNVI--PNEVTYNVLIEGHCKEGNTVRAFEL 552

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L +M ++ + P+  TY  LI G C      EA+    ++     + + + F+A+++  CK
Sbjct: 553 LDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCK 612

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G++D        M+ RGV  D V Y+ L+ G           +L   M  +G R D   
Sbjct: 613 EGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVL 672

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y  +I+AN K   ++ A  L+  M+SE   P+V+TY  L++GL ++G +  A  L  +M 
Sbjct: 673 YTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 732

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            ++ +P+  T+A ++D L   G + +A+Q+   +        + TYN LI G CK+GR++
Sbjct: 733 ASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTV-TYNILIRGFCKLGRIQ 791

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A ++   +   G  PD ++ ST+I+  C+ G + +A  L   M  +   P  V +  L+
Sbjct: 792 EAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLI 851

Query: 547 RG 548
            G
Sbjct: 852 YG 853



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 242/487 (49%), Gaps = 3/487 (0%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++ + +  L KN++    V +   L+  GL  D+     L+  LCK+        ++ 
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMN 309

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            ++   F P+    + L++GL  +G I  A  L  K+  F   P++  +N LIN +C+  
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A  LF  M ++ G    P+ VTY+ +ID  CK G +D A   L +M +  I   V 
Sbjct: 370 KLDEAESLFNNMGHK-GLF--PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            Y+SLI G C +   + AK LF EM+ NG++P+VV + ++I+  CK+G++    RL   M
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
             +G++P+T T+ +L+ G C   R++ A +LF  MV      +  +YN+LI  +CK+   
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNT 546

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
             A  L  EM+ + + P   TY  L+SGL   G + +A + ++ +Q      +   F+  
Sbjct: 547 VRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSAL 606

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           + G CK G + +A+   + +      + +  Y+ LI G+ +    ++   L  ++  +G 
Sbjct: 607 LHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGL 666

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            PD V  +TMI    K G +  A  L   M ++ C+P+ VT+  L+ G  +     K  +
Sbjct: 667 RPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAEL 726

Query: 561 LLHKMAA 567
           L  +M A
Sbjct: 727 LCREMLA 733



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 238/472 (50%), Gaps = 3/472 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
            F +L+    +N++    + + + +   G+ P +  L+ ++N L ++     A  +   I
Sbjct: 147 GFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEI 206

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           + S   P+   +  ++  LC     + A  +  ++    CD +V T+N  I GLC+ +  
Sbjct: 207 VSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRV 266

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A+++ + +++  G   + DV TY +++ GLCK    +  +E++ +M +    P+    
Sbjct: 267 WEAVEI-KNLLSYKG--LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAV 323

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           ++L+ G     +   A  L  ++   GV P +  +NA+IN  CKDGK+D+   L   M  
Sbjct: 324 SNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH 383

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +G+ P+ VTY+ L+D FC  G++  A      M   G +  VY Y+ LI+ +CK  K+  
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+ EM++  ++P+V+ Y +L+SG  + G L +A +L  +M    + P+++TF   I 
Sbjct: 444 AKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALIS 503

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLC    + EA ++F  +          TYN LI G CK G    A +L   +  KG +P
Sbjct: 504 GLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVP 563

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           D  T   +I  LC  G++ +A + + D++ +    +E+ F  LL G+ +  +
Sbjct: 564 DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGR 615



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 203/467 (43%), Gaps = 56/467 (11%)

Query: 32  PKTDLSSHHFKDGT-SIAKFLNDRHKSGNITSNEAVY------------------FFDCM 72
           P + L S H K G    AK L D   +  +  N  +Y                   +  M
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 73  IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
                SP   +FT L++ L    +      LF  +    + P+    N+LI   CK G T
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNT 546

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
             AF +L  ++     P+T T+  LI+GLC+ GR+ EA      L       N + F+ L
Sbjct: 547 VRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSAL 606

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           ++G C+      AL    EM+    A+   D+V Y+ +I G+ +        +LL QM D
Sbjct: 607 LHGYCKEGRLDDALDACREMLGRGVAM---DLVCYSVLIYGILRQQDRRSIIDLLKQMHD 663

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           + + P+ + Y ++I       + K A  L+  M+  G  P+VVT+ A+IN  CK G MDK
Sbjct: 664 QGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDK 723

Query: 313 VNRL----------------------------LELMIQ------RGVNPDTVTYNSLMDG 338
              L                            +E  IQ       G   +TVTYN L+ G
Sbjct: 724 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRG 783

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           FC +GRI  A E+ V+M+  G   D  SY+ +I   C+   +++A+ L+  ML+  + P 
Sbjct: 784 FCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPD 843

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
            + YN L+ G    G L  A +L D M    V P+  T+ + I G C
Sbjct: 844 TVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 145/263 (55%), Gaps = 4/263 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +++L+  + + +   +++ L K+++  GL PD  +   +I+   K G    AF +   ++
Sbjct: 638 YSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMV 697

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                PN VT+  LINGLC  G + +A  L +++      PN  T+   ++ L    N  
Sbjct: 698 SEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 757

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A++L + ++  F A    + VTYN +I G CK G + +A E+L+ M D  I+P+ I+Y+
Sbjct: 758 KAIQLHDVLLEGFLA----NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYS 813

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           ++I  +C   D KEA  L+  M++ GV PD V +N +I   C  G++ K   L + M++R
Sbjct: 814 TIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRR 873

Query: 324 GVNPDTVTYNSLMDGFCLVGRIS 346
           GV P+  TYNSL+ G CL+  +S
Sbjct: 874 GVKPNRATYNSLIHGTCLMSSVS 896


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 157/569 (27%), Positives = 274/569 (48%), Gaps = 50/569 (8%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +   EA   F  M   +  P   ++  ++       +++    L +RL   G  P 
Sbjct: 162 KAGRL--GEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 219

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N ++ CL K      A  +   +++    PN+ T+N +I+ LC  GR+ EA R+  
Sbjct: 220 VVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILD 278

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++   +  PN++T N +++ LC+ R    A K+FE   ++ G  C PD VTY S+IDGL 
Sbjct: 279 EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES-ASQRG--CNPDCVTYCSLIDGLG 335

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGF--------------------CCVD-- 273
           K G VD+A  L  +M D   N N + Y SLI  F                    C  D  
Sbjct: 336 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLT 395

Query: 274 -------------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
                        + ++ + +F ++   G  PDV +++ +I+   K G+  + + +   M
Sbjct: 396 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 455

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            Q+G   D   YN+++DGFC  G++ +A E+   M  K  +  V +Y  +++   K  ++
Sbjct: 456 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 515

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A  L+ E  S+ I  +V+ Y++L+ G  +VG + +A  ++++M    + P+ +T+ + 
Sbjct: 516 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 575

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           +D L K   + EA+  FQ+++  KC     TY+ LINGLC++ +   A   +  +Q +G 
Sbjct: 576 LDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 635

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           +P+VVT +TMI  L K G +  A  L    +A   +P   +F  L+ G    N+      
Sbjct: 636 VPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANR------ 689

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
               M A +  V  LS SS   + L  D+
Sbjct: 690 ---AMEAYQTTVYQLSSSSCSWNFLVPDE 715



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 240/488 (49%), Gaps = 4/488 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P +  + + +    K    D     F  L + GL PD      +I  LCK G    A  
Sbjct: 112 EPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEE 171

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  ++      P    +N +I G  + GR  +A +L ++L    C P+VV+FN+++  L 
Sbjct: 172 LFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLG 231

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + R    AL LFE M  +     +P+  TYN IID LC  G V++A  +L +M+  ++ P
Sbjct: 232 KKRKVDEALSLFEVMKKD----AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 287

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N++T N ++   C     +EA  +F      G  PD VT+ ++I+   K G++D+  RL 
Sbjct: 288 NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLF 347

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M+  G N + V Y SL+  F + GR     ++F  ++ +GC+ D+   N  ++   K 
Sbjct: 348 EKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKA 407

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +VE    ++ ++ S    P V +Y+ L+ GL + G   +   +   M+      D+  +
Sbjct: 408 GEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAY 467

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              +DG CK+G V +A ++ + ++    +  + TY  +++GL K+ RL  A  LF   + 
Sbjct: 468 NAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS 527

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           KG   +VV  S++I    K G++D+A  +L +M  K   P+  T+ +LL   V+  + ++
Sbjct: 528 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINE 587

Query: 558 VVVLLHKM 565
            +V    M
Sbjct: 588 ALVCFQSM 595



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 228/523 (43%), Gaps = 75/523 (14%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A + +  + R  F P    +  LI  L    R   A  L +++     +  V  F TL+ 
Sbjct: 29  AVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVR 88

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID---------------------- 232
            L R      AL L +E+    G+  +PD+V YN  ID                      
Sbjct: 89  ALAREGQVADALALVDEVK---GSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQG 145

Query: 233 -------------GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
                         LCK G + +A+EL  QM+     P    YN++I G+     +++A 
Sbjct: 146 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 205

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L   + + G  P VV+FN+++    K  K+D+   L E+M ++   P++ TYN ++D  
Sbjct: 206 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDML 264

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           CL GR+  A  +   M       ++ + NI+++  CK +K+E+A  ++         P  
Sbjct: 265 CLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDC 324

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKM-----QLNDVV----------------------- 431
           +TY +L+ GL + G + +A +L +KM       N VV                       
Sbjct: 325 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKE 384

Query: 432 -------PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
                  PD     TY+D + K G V +   +F+ IR+      + +Y+ LI+GL K G+
Sbjct: 385 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 444

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
            +    +FH ++ +G   D    + ++   CK G++ KA ++L +M+ K   P+  T+  
Sbjct: 445 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 504

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           ++ G  + ++  +  +L  + A  K +  ++ L S ++D   K
Sbjct: 505 IVDGLAKIDRLDEAYMLFEE-AKSKGIELNVVLYSSLIDGFGK 546



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 1/230 (0%)

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L  A  + ++++DAV     M   + RP+   Y  L+  L +      AL+L+ +MQ   
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
                  F T +  L + G V +A+ +   ++    E  I  YN  I+   K G +  AC
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           K FH L+ +G  PD V+ ++MI  LCK G++ +A +L   MEA+  VP    + T++ G+
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
               +      LL ++     + S +S +S ++  L K +K  E L+ F 
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNS-ILTCLGKKRKVDEALSLFE 244



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 8/294 (2%)

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++D     + +M +    P    Y  L+       R  RA EL   M   G    V+ + 
Sbjct: 25  RLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFT 84

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L+ A  ++ +V DA+ L  E+    + P ++ YN  +    + GN+  A K   +++  
Sbjct: 85  TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQ 144

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVF---QAIRNCKCELRIETYNCLINGLCKMGRL 485
            + PD  ++ + I  LCK G + EA ++F   +A R+  C      YN +I G    GR 
Sbjct: 145 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY---AYNTMIMGYGSAGRF 201

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A KL  RL+ +G IP VV+ ++++  L K+ ++D+A  L   M+ K+  P+  T+  +
Sbjct: 202 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNII 260

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
           +       +  +   +L +M    L  + L+++  +VD L K +K  E    F 
Sbjct: 261 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI-MVDRLCKARKLEEAYKIFE 313


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/508 (29%), Positives = 260/508 (51%), Gaps = 4/508 (0%)

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
           G   F +L ++  +    +     F R+ +    P     N L++ L K G         
Sbjct: 218 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 277

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             ++ +   P+  T+N +I+ LC EG +  + RLF ++      P+VVT+N+LI+G  + 
Sbjct: 278 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 337

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
            +      LF EM  + G  C PD++TYN +I+  CK   + +A E   +MK+  + PNV
Sbjct: 338 GSLEEVASLFNEM-KDVG--CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TY++LI  FC     + A  LF++M   G+ P+  T+ ++I+ NCK G + +  +LL  
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M+Q GV  + VTY +L+DG C  GR+  A E+F SM+  G   +   Y  L++   K ++
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +EDA+ + ++M    I+P +I Y +++ G      L +   ++++M+   +  +     T
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            ID   K G   +A+  FQ +++   E  I TY  LI+GLCK G ++ A   F R+   G
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P+V   +++I  LCK   ++ A  L  +M+ +   P    F  L+ G +++    + +
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 694

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           VL+ +M  E  +  DL + + +V   S+
Sbjct: 695 VLISRM-TELAIEFDLHVYTSLVSGFSQ 721



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 245/486 (50%), Gaps = 5/486 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G++ ++  +  F  M +M  SP + ++  L+    K    + V SLF  +   G  PD
Sbjct: 301 KEGDLENSRRL--FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPD 358

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N LINC CK      AF     +  +   PN VT++ LI+  C EG +  A +LF 
Sbjct: 359 IITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFV 418

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      PN  T+ +LI+  C+  N   A KL  +M+    A  K ++VTY +++DGLC
Sbjct: 419 DMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ---AGVKLNIVTYTALLDGLC 475

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G + +A+E+   M    I+PN   Y +L+ G+   +  ++A  +  +M +  ++PD++
Sbjct: 476 KAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLI 535

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            + ++I  +C   K+++   +LE M  RG++ + V   +++D +   G+ S A   F  M
Sbjct: 536 LYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEM 595

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              G    + +Y +LI+  CK   VE AV  +  MLS  ++P+V  Y +L+ GL +   +
Sbjct: 596 QDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCI 655

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             A KL D+MQ   + PD   F   IDG  K+G + EA+ +   +     E  +  Y  L
Sbjct: 656 ESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSL 715

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           ++G  + G L  A K F+ +  KG +P+ V C  ++    K GQ+D+A +L  +ME    
Sbjct: 716 VSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775

Query: 536 VPSEVT 541
           +    T
Sbjct: 776 ITESAT 781



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 251/554 (45%), Gaps = 38/554 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F  M   +  P   S   LL  L+K+     V   F  +   G+ P +F  N++
Sbjct: 236 EEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVM 295

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G    +  +  ++     +P+ VT+N LI+G    G + E A LF ++    C
Sbjct: 296 IDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGC 355

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+++T+N LIN  C+      A + F EM N      KP+VVTY+++ID  CK+G +  
Sbjct: 356 VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG---LKPNVVTYSTLIDAFCKEGMMQG 412

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L + M+   + PN  TY SLI   C   +  EA  L  +M+  GV+ ++VT+ A+++
Sbjct: 413 AIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD 472

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+M +   +   M++ G++P+   Y +L+ G+    R+  A ++   M     + 
Sbjct: 473 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 532

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  Y  +I  +C  +K+E+   +  EM S  I  + +   T++   F+ G   DAL   
Sbjct: 533 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFF 592

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC-- 480
            +MQ   V     T+   IDGLCK G V  AV  F  + +   +  +  Y  LI+GLC  
Sbjct: 593 QEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKN 652

Query: 481 ---------------------------------KMGRLKTACKLFHRLQHKGPIPDVVTC 507
                                            K G L+ A  L  R+       D+   
Sbjct: 653 NCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 712

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           ++++    + G++ +A     +M  K  +P EV    LLR + +  +  + + L ++M  
Sbjct: 713 TSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER 772

Query: 568 EKLVVSDLSLSSKV 581
             L+    ++   V
Sbjct: 773 MGLITESATMQFPV 786



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 14/207 (6%)

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G RH   SY I+++   + +   DA    +E          +  N+ +   F V N+ D 
Sbjct: 158 GFRHTTESYCIIVHLVFRARMYTDAHDTVKE----------VIMNSRMDMGFPVCNIFDM 207

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           L        N  V  S  F        + G + EA + F  +RN +   +  + N L++ 
Sbjct: 208 LW----STRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 263

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L K G  +   K F+ +   G  P V T + MI +LCKEG ++ +  L + M      P 
Sbjct: 264 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 323

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            VT+ +L+ G+ +     +V  L ++M
Sbjct: 324 VVTYNSLIDGYGKVGSLEEVASLFNEM 350


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/499 (29%), Positives = 257/499 (51%), Gaps = 13/499 (2%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++  ++  L  + ++D    LF  + +  L PD+   N L++ LCK G+   +  +LG++
Sbjct: 183 AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV 242

Query: 143 LRSCFTPNTVTFNFLINGLCAEG---------RIMEAARLFKKLNVFACDPNVVTFNTLI 193
           L+    PN  TFN  + GLC EG         R++EA    +K+     +P+ +T+N++I
Sbjct: 243 LKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSII 302

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           +G C+      A ++ ++ V  F    KPD  TY S+I+G CKDG  D+A  +      +
Sbjct: 303 DGYCKKGMVQDANRVLKDAV--FKGF-KPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGK 359

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            + P+++ YN+LI G         A  L  EM +NG  P++ T+N +IN  CK G +   
Sbjct: 360 GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           + L++  I +G  PD  TYN+L+DG+C   ++  A E+   M S+G   DV +YN L+N 
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG 479

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK  K E+ + +++ M  +   P++ITYN ++  L +   + +A+ L+ +M+   + PD
Sbjct: 480 LCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
             +F T   G CK G +  A Q+F+ + +         TYN +++   +   +  A KLF
Sbjct: 540 VVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLF 599

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +++ G  PD  T   +I   CK G + +    LL+   K  +PS  TF  +L      
Sbjct: 600 SVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVK 659

Query: 553 NKKSKVVVLLHKMAAEKLV 571
           +K  + V ++H M  + +V
Sbjct: 660 DKVHEAVGIIHLMLQKGIV 678



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 265/523 (50%), Gaps = 27/523 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A   FD M+     P + +F  L+ +L K         L  ++   G+ P+LF  N+ 
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257

Query: 123 INCLCKMGITSGAF---------VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           +  LC+ G    A            L +++   F P+ +T+N +I+G C +G + +A R+
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV 317

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            K        P+  T+ +LING C+  +   A+ +F++     G   +P +V YN++I G
Sbjct: 318 LKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKD---GLGKGLRPSIVLYNTLIKG 374

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           L + G +  A +L+ +M +    PN+ TYN +I G C +    +A  L  + +  G  PD
Sbjct: 375 LSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPD 434

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           + T+N +I+  CK  K+D    ++  M  +G+ PD +TYN+L++G C  G+     E+F 
Sbjct: 435 IFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFK 494

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
           +M  KGC  ++ +YNI++++ CK +KV +AV L  EM S+ ++P V+++ TL +G  ++G
Sbjct: 495 AMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIG 554

Query: 414 NLGDALKLIDKMQLN-DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           ++  A +L  +M+   DV   + T+   +    +   +  A+++F  ++N  C+    TY
Sbjct: 555 DIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTY 614

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
             +I+G CKMG +    K       K  IP + T   +++ LC + ++ +A  ++  M  
Sbjct: 615 RVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQ 674

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           K  VP  V   T+           KVV      AA K++V DL
Sbjct: 675 KGIVPETVN--TIFEA------DKKVV------AAPKILVEDL 703



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 253/505 (50%), Gaps = 12/505 (2%)

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
            +  +    V  F+R++     P +   N ++N L + G  + A  V  R+       + 
Sbjct: 87  GRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDV 146

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            T+   I   C   R   A RL + +    CD N V + T++ GL  +     A +LF+E
Sbjct: 147 YTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDE 206

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC- 270
           M+     +C PDVV +N ++  LCK G V +++ LL ++  R + PN+ T+N  + G C 
Sbjct: 207 MLAR--CLC-PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCR 263

Query: 271 ------CVDDWK--EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
                  V + +  EA+    +M++ G +PD +T+N++I+  CK G +   NR+L+  + 
Sbjct: 264 EGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVF 323

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +G  PD  TY SL++GFC  G   RA  +F   + KG R  +  YN LI    +   +  
Sbjct: 324 KGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILP 383

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A+ L  EM      P++ TYN +++GL ++G + DA  L+D        PD FT+ T ID
Sbjct: 384 ALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLID 443

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G CK   +  A ++   + +      + TYN L+NGLCK G+ +   ++F  ++ KG  P
Sbjct: 444 GYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTP 503

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           +++T + ++  LCK  ++++A DLL +M++K   P  V+F TL  GF +         L 
Sbjct: 504 NIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLF 563

Query: 563 HKMAAEKLVVSDLSLSSKVVDLLSK 587
            +M  +  V    +  + +V   S+
Sbjct: 564 RRMEKQYDVCHTTATYNIIVSAFSE 588



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 240/480 (50%), Gaps = 12/480 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EAV  F+ M      P + S   ++ +L +   ++    ++ R+   G+  D++   + 
Sbjct: 93  QEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIR 152

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   CK      A  +L  +       N V +  ++ GL   G    A  LF ++     
Sbjct: 153 IKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCL 212

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VV FN L++ LC+      + +L  +++     +C P++ T+N  + GLC++G +D+
Sbjct: 213 CPDVVAFNKLVHVLCKKGLVFESERLLGKVLKR--GVC-PNLFTFNIFVQGLCREGALDR 269

Query: 243 A---------KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           A         +E L +M +    P+ +TYNS+I G+C     ++A  +  + +  G +PD
Sbjct: 270 AVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPD 329

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
             T+ ++IN  CKDG  D+   + +  + +G+ P  V YN+L+ G    G I  A +L  
Sbjct: 330 EFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMN 389

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M   GC  ++++YN++IN  CK   V DA  L  + +++   P + TYNTL+ G  +  
Sbjct: 390 EMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQL 449

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L  A +++++M    + PD  T+ T ++GLCK G   E +++F+A+    C   I TYN
Sbjct: 450 KLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYN 509

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +++ LCK  ++  A  L   ++ KG  PDVV+  T+    CK G +D A  L   ME +
Sbjct: 510 IIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQ 569



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 219/457 (47%), Gaps = 48/457 (10%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+  + N ++N L   G   +A +++ ++       +V T+   I   C+T     AL+L
Sbjct: 109 PSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRL 168

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
              M  E G  C  + V Y +++ GL   G  D A+EL  +M  R + P+V+ +N L+  
Sbjct: 169 LRNM-PELG--CDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHV 225

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR---------LLEL 319
            C      E++ L  +++  GV P++ TFN  +   C++G +D+  R          L  
Sbjct: 226 LCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRK 285

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M+  G  PD +TYNS++DG+C  G +  A  +    V KG + D ++Y  LIN  CKD  
Sbjct: 286 MVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGD 345

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            + A+ ++++ L + +RPS++ YNTL                                  
Sbjct: 346 PDRAMAVFKDGLGKGLRPSIVLYNTL---------------------------------- 371

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I GL + G +L A+Q+   +    C   I TYN +INGLCKMG +  A  L      KG
Sbjct: 372 -IKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG 430

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             PD+ T +T+I   CK+ ++D A +++  M ++   P  +T+ TLL G  +  K  +V+
Sbjct: 431 CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM 490

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
            +   M  EK    ++   + +VD L K KK  E ++
Sbjct: 491 EIFKAM-EEKGCTPNIITYNIIVDSLCKAKKVNEAVD 526



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 154/318 (48%), Gaps = 8/318 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A +  D  I     P + ++  L+    K  + D+   +  R+ S G+ PD+   N L
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTL 476

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G +     +   +     TPN +T+N +++ LC   ++ EA  L  ++     
Sbjct: 477 LNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGL 536

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VV+F TL  G C+  +   A +LF  M  ++  +C     TYN I+    +   ++ 
Sbjct: 537 KPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYD-VCHT-TATYNIIVSAFSEQLNMNM 594

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L   MK+   +P+  TY  +I GFC + +  +     +E M+    P + TF  ++N
Sbjct: 595 AMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLN 654

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   K+ +   ++ LM+Q+G+ P+TV  N++   F    ++  A ++ V  + K    
Sbjct: 655 CLCVKDKVHEAVGIIHLMLQKGIVPETV--NTI---FEADKKVVAAPKILVEDLLKKGHI 709

Query: 363 DVYSYNILINANCKDQKV 380
             Y+Y +L +   +D+K+
Sbjct: 710 AYYTYELLYDG-IRDKKI 726



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 169/376 (44%), Gaps = 55/376 (14%)

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           + L AL++F    +E G   K    TY  I+  L   G  ++ ++LL +M++ N+N    
Sbjct: 19  DPLKALEMFNSAKSEDGF--KHTASTYKCIVQKLGHHGEFEEMEKLLSEMRE-NVN---- 71

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDN-----GVQPDVVTFNAMINYNCKDGKMDKVNR 315
             N+L+ G             +IE M N      VQ  V TF  M  YNC          
Sbjct: 72  --NALLEG------------AYIEAMKNYGRKGKVQEAVDTFERMDFYNC---------- 107

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
                     +P   ++N++M+     G  ++A ++++ M  +G + DVY+Y I I + C
Sbjct: 108 ----------DPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFC 157

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K  +   A+ L R M       + + Y T+++GL+  G    A +L D+M    + PD  
Sbjct: 158 KTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVV 217

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK----- 490
            F   +  LCK G V E+ ++   +        + T+N  + GLC+ G L  A +     
Sbjct: 218 AFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVV 277

Query: 491 ----LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
                  ++ + G  PD +T +++I   CK+G +  AN +L D   K   P E T+C+L+
Sbjct: 278 EAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLI 337

Query: 547 RGFVQNNKKSKVVVLL 562
            GF ++    + + + 
Sbjct: 338 NGFCKDGDPDRAMAVF 353



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 12/215 (5%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN   K+G   S E +  F  M +   +P + ++ I++  L K K+ +  V L   + S
Sbjct: 476 LLNGLCKAGK--SEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKS 533

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS---CFTPNTVTFNFLINGLCAEGR 166
            GL PD+     L    CK+G   GA+ +  R+ +    C T  T T+N +++    +  
Sbjct: 534 KGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHT--TATYNIIVSAFSEQLN 591

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK-LFEEMVNEFGAICKPDVV 225
           +  A +LF  +    CDP+  T+  +I+G C+  N     K L E M   F     P + 
Sbjct: 592 MNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRF----IPSLT 647

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           T+  +++ LC    V +A  ++  M  + I P  +
Sbjct: 648 TFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV 682



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 6/190 (3%)

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL---CKNGFVLEAVQVF 457
           TY  ++  L   G   +  KL+ +M+ N  V ++     YI+ +    + G V EAV  F
Sbjct: 42  TYKCIVQKLGHHGEFEEMEKLLSEMREN--VNNALLEGAYIEAMKNYGRKGKVQEAVDTF 99

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +    C+  + ++N ++N L + G    A K++ R++ +G   DV T +  I   CK 
Sbjct: 100 ERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKT 159

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
            +   A  LL +M    C  + V +CT++ G   + +      L  +M A + +  D+  
Sbjct: 160 ARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLA-RCLCPDVVA 218

Query: 578 SSKVVDLLSK 587
            +K+V +L K
Sbjct: 219 FNKLVHVLCK 228


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 231/441 (52%), Gaps = 3/441 (0%)

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
            NG  P++   N++I+  CK G    A  V   +    F P   T+  LI+G C  G+  
Sbjct: 233 GNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQ 292

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
              +L  ++NV   + NV  FN++I+   +      A ++   M+ E G  C+PD+ TYN
Sbjct: 293 VVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMR-MMTEMG--CEPDITTYN 349

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +I+  C  G + +A+E L + K+R + PN  +Y  L+  +C   D+  A  +  ++ + 
Sbjct: 350 ILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAET 409

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G +PD+V++ A I+ +   G++D    + E M+++GV PD   YN LM G C  GR   A
Sbjct: 410 GDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAA 469

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           + L   M+    + D Y Y  L++   ++ +++ A  L+  ++S+ I P V+ YN ++ G
Sbjct: 470 KLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKG 529

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G + DA+  ++KM++ +  PD +T +T IDG  K   +  A+++F  +   K +  
Sbjct: 530 LCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPN 589

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           +  Y  LING CK+  +  A K+F  +Q     P+VVT + +I    K G+ +KA     
Sbjct: 590 VVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFE 649

Query: 529 DMEAKNCVPSEVTFCTLLRGF 549
            M   NC+P++ TF  L+ G 
Sbjct: 650 LMLMNNCLPNDTTFHYLINGL 670



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 221/447 (49%), Gaps = 17/447 (3%)

Query: 113 FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC------FTPNTVTFNFLINGLCAEGR 166
           FP +   N L+NCL K G    A  +  ++L            +  +   ++ GLC  G+
Sbjct: 161 FPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGK 220

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVV 225
           + E  +L        C PNVV +N +I+G C+  +   A ++FEE+ +  F     P + 
Sbjct: 221 VEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGF----LPTLE 276

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG---FCCVDDWKEAKCLF 282
           TY ++IDG CK G      +LL +M    +N NV  +NS+I     +  VD   E   + 
Sbjct: 277 TYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMM 336

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM   G +PD+ T+N +IN++C  G++ +    LE   +R + P+  +Y  LM  +C  
Sbjct: 337 TEM---GCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQ 393

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G    A ++   +   G + D+ SY   I+ +    +++ A+ +  +M+ + + P    Y
Sbjct: 394 GDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIY 453

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N L+SGL + G    A  L+ +M   ++ PD++ +AT +DG  +N  + +A ++F+ + +
Sbjct: 454 NVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMS 513

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              +  +  YN +I GLCK G++  A    ++++     PD  T ST+I    K+  +D 
Sbjct: 514 KGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDS 573

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           A  +   M  +   P+ V + +L+ GF
Sbjct: 574 ALKMFGQMMKQKYKPNVVAYTSLINGF 600



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 232/491 (47%), Gaps = 15/491 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L+    K  ++  V  L   +N  GL  ++ V N +I+   K G+   A  +
Sbjct: 273 PTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEM 332

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  +      P+  T+N LIN  C+ GRI EA    ++       PN  ++  L++  C+
Sbjct: 333 MRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCK 392

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             + ++A  +  + + E G   KPD+V+Y + I G    G +D A  +  +M ++ + P+
Sbjct: 393 QGDYVMASDMLFK-IAETGD--KPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPD 449

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              YN L+ G C    +  AK L  EM+D  +QPD   +  +++   ++ ++DK   L E
Sbjct: 450 AQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFE 509

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           +++ +G++P  V YN ++ G C  G+++ A      M       D Y+++ +I+   K  
Sbjct: 510 VVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQH 569

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++ A+ ++ +M+ ++ +P+V+ Y +L++G  ++ ++  A K+   MQ  ++ P+  T+ 
Sbjct: 570 DLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYT 629

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK-------- 490
             I G  K G   +A   F+ +    C     T++ LINGL  +       +        
Sbjct: 630 ILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRS 689

Query: 491 ----LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
                F  +  +G    + T +++I  LCK G +D A  L   M  K  +   V F  LL
Sbjct: 690 LILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALL 749

Query: 547 RGFVQNNKKSK 557
            G  Q  K  +
Sbjct: 750 HGLCQTGKSKE 760



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 221/477 (46%), Gaps = 15/477 (3%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D    + + +   G  PD+   N+LIN  C  G    A   L R       PN  ++  L
Sbjct: 327 DKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPL 386

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           ++  C +G  + A+ +  K+      P++V++   I+G        VAL + E+M+ E G
Sbjct: 387 MHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMM-EKG 445

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
               PD   YN ++ GLCK G    AK LL +M D N+ P+   Y +L+ GF   ++  +
Sbjct: 446 VF--PDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDK 503

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  LF  +M  G+ P VV +N MI   CK GKM      +  M      PD  T+++++D
Sbjct: 504 ATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVID 563

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G+     +  A ++F  M+ +  + +V +Y  LIN  CK   +  A  ++R M S  + P
Sbjct: 564 GYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEP 623

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK---NGFVLEA- 453
           +V+TY  L+ G  + G    A    + M +N+ +P+  TF   I+GL        ++E  
Sbjct: 624 NVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKN 683

Query: 454 --------VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
                   +  F  + +      I TYN +I  LCK G + TA  L  ++  KG + D V
Sbjct: 684 EENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSV 743

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
             S ++H LC+ G+  +  +++     K    +   +   L  ++ + K S+   +L
Sbjct: 744 CFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYIL 800



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 182/426 (42%), Gaps = 45/426 (10%)

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
           F+   N V +++L+  + + R       + E+M N      KP +   NS+I    + GF
Sbjct: 87  FSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRN---FKPTLEALNSVICVYAEYGF 143

Query: 240 VDKAKELLLQMKD-RNINPNVITYNSL--------------------------------- 265
           VDKA ++   + +  N  P V+  NSL                                 
Sbjct: 144 VDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVV 203

Query: 266 --------ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
                   + G C V   +E + L  +   NG  P+VV +N +I+  CK G + +  R+ 
Sbjct: 204 DNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVF 263

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E +  +G  P   TY +L+DGFC  G+     +L   M   G   +V  +N +I+A  K 
Sbjct: 264 EELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKY 323

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             V+ A  + R M      P + TYN L++     G + +A + +++ +   ++P+ F++
Sbjct: 324 GLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSY 383

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              +   CK G  + A  +   I     +  + +Y   I+G    G +  A  +  ++  
Sbjct: 384 TPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMME 443

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           KG  PD    + ++  LCK+G+   A  LL +M   N  P    + TL+ GF++NN+  K
Sbjct: 444 KGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDK 503

Query: 558 VVVLLH 563
              L  
Sbjct: 504 ATELFE 509



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 180/376 (47%), Gaps = 12/376 (3%)

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC---CVDDWKEAKCL 281
           V Y+S++  + K     + + +L  MK+RN  P +   NS+IC +     VD  K  K  
Sbjct: 94  VAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVD--KAVKMF 151

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP------DTVTYNSL 335
           ++        P VV  N+++N   K+GK+D    L + M++RG +       D  +   +
Sbjct: 152 YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIV 211

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           + G C VG++   R+L       GC  +V  YN++I+  CK   ++ A  ++ E+  +  
Sbjct: 212 VKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGF 271

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P++ TY  L+ G  + G      +L+++M +  +  +   F + ID   K G V +A +
Sbjct: 272 LPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAE 331

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           + + +    CE  I TYN LIN  C  GR+K A +   R + +  +P+  + + ++H  C
Sbjct: 332 MMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYC 391

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           K+G    A+D+L  +      P  V++   + G V   +    +++  KM  EK V  D 
Sbjct: 392 KQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKM-MEKGVFPDA 450

Query: 576 SLSSKVVDLLSKDKKY 591
            + + ++  L K  ++
Sbjct: 451 QIYNVLMSGLCKKGRF 466



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 146/324 (45%), Gaps = 15/324 (4%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+ +   P    +  L+    +N + D    LF+ + S G+ P +   N++I  LCK G 
Sbjct: 476 MLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGK 535

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + A   + ++  +   P+  T + +I+G   +  +  A ++F ++      PNVV + +
Sbjct: 536 MTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTS 595

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LING C+  +   A K+F  M   F    +P+VVTY  +I G  K G  +KA      M 
Sbjct: 596 LINGFCKIADMSRAEKVFRAM-QSFN--LEPNVVTYTILIGGFSKTGKPEKAASFFELML 652

Query: 252 DRNINPNVITYNSLICGFCCV------------DDWKEAKCLFIEMMDNGVQPDVVTFNA 299
             N  PN  T++ LI G   +            +D       F  M+  G    + T+N+
Sbjct: 653 MNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNS 712

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I   CK G +D    L   M+++G   D+V +++L+ G C  G+    R +    ++K 
Sbjct: 713 IIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKI 772

Query: 360 CRHDVYSYNILINANCKDQKVEDA 383
                + Y++ ++    D K  +A
Sbjct: 773 DFQTAFEYSLKLDKYLYDGKPSEA 796


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 262/505 (51%), Gaps = 6/505 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +  +EA+     M + + +P M +F IL+  L ++ ++  V +L + +   G+ P+
Sbjct: 278 KSGRV--DEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPN 335

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             + N LI+  C+ G  + A  +   ++        VT+N +   LC EG +  A R+ +
Sbjct: 336 EVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILE 395

Query: 176 KLNVFACDPNVVTFNTLINGLC-RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           ++       +   FN+++ GL  RT      ++L  EMV       KP+     +    L
Sbjct: 396 EMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRG---MKPNDALMTACTKQL 452

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           C+     +A  + L+M ++ +  N+ T N+LI G C   + K A  +   M++ G++ D 
Sbjct: 453 CQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDN 512

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +T+N MI   CKD K+++  +L + MI++G  PD   +NS++  +C +G++  A  L   
Sbjct: 513 ITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQ 572

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M  +G + DV SY  +I+  CK + ++ A     E+++  ++P+ + YN L+ G  + GN
Sbjct: 573 MKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGN 632

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A+ ++D M+   + P + T+ + +  +C  G V EA  +F+  R    E+ +  Y  
Sbjct: 633 ISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTI 692

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +I GLCK+G++  A   F  ++ +   P+ +T +T+++  CK G  ++A+ L  +M +  
Sbjct: 693 MIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSG 752

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVV 559
            VP  V++ TL+ GF Q +   K +
Sbjct: 753 IVPDNVSYNTLVTGFSQVDSLDKAI 777



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 268/566 (47%), Gaps = 44/566 (7%)

Query: 56  KSGNITSNEAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
           ++GN+ +   V  FD M   K  +P   S+T ++  L K  + D    +   L   GL  
Sbjct: 205 RTGNLGATCKV--FDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQ 262

Query: 115 DLFVL--NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
               +  NLL++ LCK G    A  + GR+  S   P+ VTF  LINGL    R  E   
Sbjct: 263 SAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGA 322

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           L +++      PN V  N LI+  CR  +   A++LF+EMV++     K   VTYN I  
Sbjct: 323 LLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKE---MKSTAVTYNLIAR 379

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI-EMMDNGVQ 291
            LCK+G +++A+ +L +M    +  +   +NS++ G        E+    I EM+  G++
Sbjct: 380 ALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMK 439

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           P+     A     C+  +  +   +   M+++G+  +  T N+L+ G C    +  A E+
Sbjct: 440 PNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEV 499

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
             +MV+KG   D  +YNI+I   CKD K+E+A+ L  +M+ +  +P    +N+++     
Sbjct: 500 LRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCD 559

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
           +G + +AL L+ +M++  V PD  ++ T IDG CK   + +A +    +  C  +     
Sbjct: 560 LGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVI 619

Query: 472 YNCLINGLCKMGRLKTA-------------------CKLFHRLQHKGPIPD--------- 503
           YN LI G  + G +  A                   C L H + H G + +         
Sbjct: 620 YNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSR 679

Query: 504 -------VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
                  VV  + MI  LCK G+MD+A +   +M +++  P+++T+ TL+  + ++    
Sbjct: 680 KNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNE 739

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVV 582
           +   L  +M +  +V  ++S ++ V 
Sbjct: 740 EASKLFDEMVSSGIVPDNVSYNTLVT 765



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 196/384 (51%), Gaps = 10/384 (2%)

Query: 78  SPGMTSFT-----ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
           S GMT  +     ++  +L +  + ++VV L   +   G+ P+  ++      LC+    
Sbjct: 399 STGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRH 458

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA-RLFKKLNVFACDPNVVTFNT 191
             A  +  ++L      N  T N LI+GLC EG+ M+ A  + + +     + + +T+N 
Sbjct: 459 QEAVGIWLKMLEKGLCINIATSNALIHGLC-EGKNMKGATEVLRTMVNKGMELDNITYNI 517

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I G C+      ALKL ++M+ +     KPD   +NSII   C  G +++A  LL QMK
Sbjct: 518 MIQGCCKDSKIEEALKLRDDMIRKG---FKPDAYMFNSIIHAYCDLGKMEEALHLLGQMK 574

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              + P+V++Y ++I G+C   D ++A     E+M  G++P+ V +NA+I    ++G + 
Sbjct: 575 IEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNIS 634

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               +L+ M   G+ P  VTY SLM   C  G +  A+ +F           V  Y I+I
Sbjct: 635 GAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMI 694

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              CK  K+++A+  + EM S  I P+ ITY TL+    + GN  +A KL D+M  + +V
Sbjct: 695 QGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIV 754

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQ 455
           PD+ ++ T + G  +   + +A++
Sbjct: 755 PDNVSYNTLVTGFSQVDSLDKAIE 778



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 214/461 (46%), Gaps = 18/461 (3%)

Query: 150 NTVTFNFLING---LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           +T + + LIN      A G +  A   F  L+     P+V T N L+  L RT N     
Sbjct: 154 STPSSDLLINTCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATC 213

Query: 207 KLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI--NPNVIT 261
           K+F+EM +     CK   P+  +Y S+I  LCK G VD   ++L  +    +  +   + 
Sbjct: 214 KVFDEMRD-----CKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVP 268

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           YN L+   C      EA  L   M ++ V P +VTF  +IN   +  +  +V  LL  M 
Sbjct: 269 YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREME 328

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             G+ P+ V  N L+D  C  G  + A  LF  MVSK  +    +YN++  A CK+ ++E
Sbjct: 329 GLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEME 388

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQ-VGNLGDALKLIDKMQLNDVVPDSFTFATY 440
            A  +  EMLS  +      +N++++GL Q  G L   ++LI +M    + P+       
Sbjct: 389 RAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTAC 448

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
              LC+     EAV ++  +      + I T N LI+GLC+   +K A ++   + +KG 
Sbjct: 449 TKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGM 508

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
             D +T + MI   CK+ ++++A  L  DM  K   P    F +++  +    K  + + 
Sbjct: 509 ELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALH 568

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDK---KYRECLNQF 598
           LL +M  E  V  D+     ++D   K K   K  E LN+ 
Sbjct: 569 LLGQMKIEG-VQPDVVSYGTIIDGYCKAKDIQKANEYLNEL 608



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 133/288 (46%), Gaps = 5/288 (1%)

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS-KGCRHDVYSYNILINANCKD 377
           ++  R  +P   T N+L++     G +    ++F  M   K    + YSY  +I A CK 
Sbjct: 183 VLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKV 242

Query: 378 QKVEDAVCLYREMLSERIRPSV--ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
            KV+D   +  +++   ++ S   + YN L+  L + G + +A++L  +M+ + V P   
Sbjct: 243 GKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMV 302

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           TF   I+GL ++    E   + + +            N LI+  C+ G    A +LF  +
Sbjct: 303 TFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEM 362

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             K      VT + +   LCKEG+M++A  +L +M +         F +++ G +Q   +
Sbjct: 363 VSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGR 422

Query: 556 -SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
              VV L+ +M    +  +D +L +     L + ++++E +  +  +L
Sbjct: 423 LESVVRLISEMVKRGMKPND-ALMTACTKQLCQGRRHQEAVGIWLKML 469


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 261/534 (48%), Gaps = 7/534 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +   EA   F  M +   +P   ++TIL+    +  + D     F ++   G+   
Sbjct: 377 KTGKL--EEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISAT 434

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N +INC CK G    A ++   ++     P   T+  LI+G C +G + +A +L+ 
Sbjct: 435 VYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYH 494

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PN VTF  LI GLC+      A KLF+EMV E   +  P+ VTYN +I+G C
Sbjct: 495 EMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMV-ELKIL--PNEVTYNVLIEGHC 551

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           ++G   +A ELL +M  + ++P+  TY  LI G C      EAK    ++     + D +
Sbjct: 552 REGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDEL 611

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            + A++   CK+G++ +     + M+ RG+  D V+Y  L+ G  L        EL   M
Sbjct: 612 CYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG-ALNQNDRILFELLREM 670

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             KG + D   Y ILI+   K   ++ A   +  M+ E   P+ +TY  L++GLF+ G +
Sbjct: 671 HGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYV 730

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A  L  +M + + +P+  T+  ++D L K G +  A+Q+  A+        + TYN L
Sbjct: 731 NEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTV-TYNIL 789

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I G C++G+ + A KL   +   G +PD +T ST I+  CK G +D A D+   M  +  
Sbjct: 790 IRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGL 849

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
            P  V F  L+     N +  + + L + M    L  +  +  S +V L  + +
Sbjct: 850 KPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRAR 903



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 246/498 (49%), Gaps = 13/498 (2%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A Y+F+ MI+   S  + S+  ++    K  +      LFK +   GL P +     LI+
Sbjct: 419 AFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLIS 478

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G+   AF +   +      PNTVTF  LI GLC   ++ EA++LF ++      P
Sbjct: 479 GYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILP 538

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N VT+N LI G CR  NT  A +L +EM+ +      PD  TY  +I GLC  G V +AK
Sbjct: 539 NEVTYNVLIEGHCREGNTTRAFELLDEMIKKG---LSPDTYTYRPLIAGLCSTGRVSEAK 595

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E +  +  ++   + + Y +L+ GFC     KEA     EM+  G+Q D+V++  +I+  
Sbjct: 596 EFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLIS-- 653

Query: 305 CKDGKMDKVNR----LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
              G +++ +R    LL  M  +G+ PD V Y  L+DGF   G + +A E +  M+ +G 
Sbjct: 654 ---GALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGY 710

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +  +Y  L+N   K   V +A  L++ ML     P+ ITY   L  L + GN+ +AL+
Sbjct: 711 VPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ 770

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L + M L     ++ T+   I G C+ G   EA ++   +          TY+  I   C
Sbjct: 771 LHNAM-LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYC 829

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G +  A  ++  +  +G  PD V  + +IH  C  G++D+A  L  DM  +   P++ 
Sbjct: 830 KRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQS 889

Query: 541 TFCTLLRGFVQNNKKSKV 558
           T+ +L+    Q  + ++V
Sbjct: 890 TYHSLMVQLAQRARLTQV 907



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 263/523 (50%), Gaps = 4/523 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF+   K K S   + F +L+    +NK+    V +   +   GL P++  L+ L+N L 
Sbjct: 143 FFESYKKYKFSSS-SGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALA 201

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           ++        +   ++ +   P+   +  ++  LC      +A  +  +     C  ++V
Sbjct: 202 RIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIV 261

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+N  INGLC+++    A+++ +  + E G   K D+VTY +++ GLC+    +   E++
Sbjct: 262 TYNVFINGLCKSKRVWEAVEV-KRSLGEKG--LKADLVTYCTLVLGLCRIQEFEVGMEMM 318

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M +    P+    + LI G   +   + A  L  ++   GV P++  +N+MIN  CK 
Sbjct: 319 DEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKT 378

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           GK+++   L  +M +RG+NP+ VTY  L+DGF    ++  A   F  M+  G    VYSY
Sbjct: 379 GKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSY 438

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N +IN  CK  K++ A  L++EM+ + ++P+V TY +L+SG  + G +  A KL  +M  
Sbjct: 439 NSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTG 498

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + P++ TF   I GLC+   + EA ++F  +   K      TYN LI G C+ G    
Sbjct: 499 KGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTR 558

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A +L   +  KG  PD  T   +I  LC  G++ +A + + D+  K+    E+ +  LL+
Sbjct: 559 AFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQ 618

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           GF +  +  + +V   +M    L +  +S +  +   L+++ +
Sbjct: 619 GFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDR 661



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 250/522 (47%), Gaps = 12/522 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           + +  FD ++     P    +T+++  L + K ++    +  +   NG    +   N+ I
Sbjct: 208 QVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFI 267

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N LCK      A  V   +       + VT+  L+ GLC          +  ++      
Sbjct: 268 NGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYV 327

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+    + LI GL +  +   A +L  + V + G +  P++  YNS+I+ LCK G +++A
Sbjct: 328 PSEAAVSGLIEGLIKMGSIEGAFELLNK-VGKLGVV--PNLFVYNSMINSLCKTGKLEEA 384

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           + L   M +R +NPN +TY  LI GF        A   F +M++ G+   V ++N+MIN 
Sbjct: 385 ELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINC 444

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK GKM     L + M+ +G+ P   TY SL+ G+C  G + +A +L+  M  KG   +
Sbjct: 445 QCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPN 504

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             ++  LI   C+  K+ +A  L+ EM+  +I P+ +TYN L+ G  + GN   A +L+D
Sbjct: 505 TVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLD 564

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M    + PD++T+   I GLC  G V EA +    + +    L    Y  L+ G CK G
Sbjct: 565 EMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEG 624

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN----DLLLDMEAKNCVPSE 539
           R+K A      +  +G   D+V+ + +I      G +++ +    +LL +M  K   P  
Sbjct: 625 RIKEALVARQEMVGRGLQMDLVSYAVLI-----SGALNQNDRILFELLREMHGKGMQPDN 679

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           V +  L+ GF+++    K     + M  E  V + ++ ++ V
Sbjct: 680 VIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALV 721


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 166/608 (27%), Positives = 295/608 (48%), Gaps = 85/608 (13%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI+   +P   +F +L+  L ++   D    LF +++  G  P+ F + +L+   C+ G 
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGR 201

Query: 132 TSGAF-VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
           T  A   V G++  +    N V +N L++  C +    EA +L +++      P+VVTFN
Sbjct: 202 TKQALEFVDGKMGGNV---NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFN 258

Query: 191 TLINGLCRTRNTLVALKLFEEMV--NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           + I+ LCR      A ++F +M    E G + KP+VVT+N ++ G C++G +++A+ L+ 
Sbjct: 259 SRISALCRAGKVFEASRIFRDMQMDGELG-LPKPNVVTFNLMLKGFCQEGMMEEARSLVE 317

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            MK      ++ +YN+ + G        E + +  EM++NG++P++ ++N +++  C++ 
Sbjct: 318 TMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNH 377

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY--- 365
            M    RL++LM+  GV PDTVTY +L+ G+C  G++  A+ +   M+ KGC  + Y   
Sbjct: 378 MMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCN 437

Query: 366 -------------------------SY-------NILINANCKDQKVEDAVCLYREMLSE 393
                                    SY       NI++N  C++ ++E A  +  EM ++
Sbjct: 438 TLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTD 497

Query: 394 RIR----------------------PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
                                    P VITY TL++GL +VG L +A K   +M   ++ 
Sbjct: 498 GTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLH 557

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PDS T+ T++   CK G +  A++V + +    C   ++TYN LI GL   G++     L
Sbjct: 558 PDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGL 617

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLRGFV 550
              ++ +G  PD+ T + MI+ LC+ G+   A  LL +M  K  V P+  +F  L++ F 
Sbjct: 618 MDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFC 677

Query: 551 QNNK--------KSKVVVLLHKMAAEKLVVSDLSLSSKVVD------------LLSKDKK 590
           ++             + V  HK A   L+ ++L    K+ D            LLSK+  
Sbjct: 678 KSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFM 737

Query: 591 YRECLNQF 598
           Y + +++ 
Sbjct: 738 YEDLIDKL 745



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 155/641 (24%), Positives = 268/641 (41%), Gaps = 122/641 (19%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A+ F D   KM  +     +  L++   K    D    L +R+   GL PD+   N 
Sbjct: 202 TKQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNS 259

Query: 122 LINCLCKMGITSGAFVVLGRILR--------SCFTPNTVTFNFLINGLCAEGRIMEAARL 173
            I+ LC+    +G      RI R            PN VTFN ++ G C EG + EA  L
Sbjct: 260 RISALCR----AGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            + +       ++ ++NT + GL R    L    + +EMV E G   +P++ +YN ++DG
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMV-ENG--IEPNIYSYNIVMDG 372

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP- 292
           LC++  +  A+ L+  M    + P+ +TY +L+ G+C      EAK +  EM+  G  P 
Sbjct: 373 LCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPN 432

Query: 293 ----------------------------------DVVTFNAMINYNCKDGKMDKVNRLLE 318
                                             D VT N ++N  C++G+++K + ++ 
Sbjct: 433 TYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVS 492

Query: 319 LMIQRGVN----------------------PDTVTYNSLMDGFCLVGRISRARELFVSMV 356
            M   G N                      PD +TY +L++G C VG++  A++ F+ M+
Sbjct: 493 EMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMM 552

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           +K    D  +Y+  +   CK  K+  A+ + ++M       ++ TYN+L+ GL   G + 
Sbjct: 553 AKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIF 612

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC-ELRIETYNCL 475
           +   L+D+M+   + PD  T+   I+ LC+ G   +A  +   + +       + ++  L
Sbjct: 613 EMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKIL 672

Query: 476 INGLCKMGRLKTACKLF------------------HRLQHKGPIPDVVTC---------- 507
           I   CK G  K AC+LF                  + L   G + D              
Sbjct: 673 IKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLL 732

Query: 508 ------STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
                   +I  LCK+G++D A+ LL  +  K       +F  ++ G  +   K +    
Sbjct: 733 SKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQ---- 788

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
               A E   + +L+L  K     + D+ YR   + FR  L
Sbjct: 789 ----ADELGRIMELALEDK-----TSDRTYRNGNSIFRRKL 820



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 152/322 (47%), Gaps = 37/322 (11%)

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L+ +M+  GV P+  TFN +I   C+   +D    L + M ++G  P+  T   L+ GFC
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 341 LVGRISRARE---------------------------------LFVSMVSKGCRHDVYSY 367
             GR  +A E                                 L   M  KG   DV ++
Sbjct: 198 RAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTF 257

Query: 368 NILINANCKDQKVEDAVCLYREMLSER----IRPSVITYNTLLSGLFQVGNLGDALKLID 423
           N  I+A C+  KV +A  ++R+M  +      +P+V+T+N +L G  Q G + +A  L++
Sbjct: 258 NSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVE 317

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M+         ++ T++ GL +NG +LE   V   +     E  I +YN +++GLC+  
Sbjct: 318 TMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNH 377

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A +L   +   G  PD VT +T++H  C +G++ +A  +L +M  K C P+  T  
Sbjct: 378 MMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCN 437

Query: 544 TLLRGFVQNNKKSKVVVLLHKM 565
           TLL    +  +KS+   +L KM
Sbjct: 438 TLLNSLWKEGRKSEAEEMLQKM 459



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 37/290 (12%)

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS------ 366
           V  L   MIQ GVNP+T T+N L+   C    +  ARELF  M  KGC+ + ++      
Sbjct: 135 VTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVR 194

Query: 367 ---------------------------YNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
                                      YN L+++ CK    ++A  L   M  + + P V
Sbjct: 195 GFCRAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDV 254

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV----PDSFTFATYIDGLCKNGFVLEAVQ 455
           +T+N+ +S L + G + +A ++   MQ++  +    P+  TF   + G C+ G + EA  
Sbjct: 255 VTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARS 314

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           + + ++     + +E+YN  + GL + G+L     +   +   G  P++ + + ++  LC
Sbjct: 315 LVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLC 374

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +   M  A  L+  M +    P  VT+ TLL G+    K  +   +L++M
Sbjct: 375 RNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEM 424



 Score = 39.7 bits (91), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 20/79 (25%), Positives = 36/79 (45%)

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           +  R      L+  +   G  P+  T + +I  LC+   +D A +L   M  K C P++ 
Sbjct: 128 QQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKF 187

Query: 541 TFCTLLRGFVQNNKKSKVV 559
           T   L+RGF +  +  + +
Sbjct: 188 TVGILVRGFCRAGRTKQAL 206


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 249/489 (50%), Gaps = 14/489 (2%)

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
           +M+ SP   +   +L  L + +++D+V   ++ + S GL PD+ + ++L  C  K G  S
Sbjct: 191 EMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPS 250

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
               +L  +      PN   +   I  LC E ++ EA ++F+ + +    PN+ T++ +I
Sbjct: 251 KKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMI 310

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           +G C+T N   A  L++E++    A   P+VV + +++DG CK   +  A+ L + M   
Sbjct: 311 DGYCKTGNLRQAYGLYKEIL---VAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKF 367

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            ++PN+  YN LI G C   +  EA  L  EM    + PDV T+  +IN  C + ++ + 
Sbjct: 368 GVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEA 427

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           NRL + M    + P +VTYNSL+ GFC    I +A +L   M S G   ++ +++ LI+ 
Sbjct: 428 NRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDG 487

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK + ++ A+ LY EM  + I P V+TY TL+   F+  N+ +AL+L   M    + P+
Sbjct: 488 YCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPN 547

Query: 434 SFTFATYIDGLCKNGFVLEAVQVF---------QAIRNCKCELRIETYNCLINGLCKMGR 484
             TFA  +DG  K G + +A+  +         ++I    C  +   + CLI GLC+ G 
Sbjct: 548 DHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSC-WKYVGFTCLIEGLCQNGY 606

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +  A + F  ++  G  PD+ +  +M+    +E ++     L  DM     +P+ +    
Sbjct: 607 ILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPN-LMVNQ 665

Query: 545 LLRGFVQNN 553
           LL  F Q N
Sbjct: 666 LLAMFYQEN 674



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 206/406 (50%), Gaps = 6/406 (1%)

Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
           F+ LI      G   +A  + +++    C P+      ++NGL R R        ++ M+
Sbjct: 169 FSLLIMEFLEMGLFEDALWVSREMR---CSPDSKACLAILNGLVRRRRFDSVWVDYQLMI 225

Query: 214 NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
           +  G +  PDV  Y+ +     K GF  K ++LL +M    + PNV  Y   I   C  +
Sbjct: 226 SR-GLV--PDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCREN 282

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
             +EA+ +F  M  +GV P++ T++AMI+  CK G + +   L + ++   + P+ V + 
Sbjct: 283 KMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFG 342

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +L+DGFC    +  AR LFV MV  G   ++Y YN LI+  CK   + +A+ L  EM S 
Sbjct: 343 TLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESL 402

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            + P V TY  L++GL     L +A +L  +M+   + P S T+ + I G CK   + +A
Sbjct: 403 NLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKA 462

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           + +   + +   E  I T++ LI+G CK+  +K A  L+  +  KG +PDVVT +T+I  
Sbjct: 463 LDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDA 522

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             KE  M +A  L  DM      P++ TF  L+ GF +  + S  +
Sbjct: 523 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAI 568



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 216/438 (49%), Gaps = 27/438 (6%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D M  +   P +  +TI +  L +  + +    +F+ +  +G+ P+L+  + +I+  CK 
Sbjct: 257 DEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKT 316

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G    A+ +   IL +   PN V F  L++G C    ++ A  LF  +  F  DPN+  +
Sbjct: 317 GNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVY 376

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N LI+G C++ N L A+ L  EM +       PDV TY  +I+GLC +  + +A  L  +
Sbjct: 377 NCLIHGQCKSGNMLEAMGLLSEMES---LNLSPDVFTYTILINGLCTEERLAEANRLFQR 433

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           MK+  I P+ +TYNSLI GFC   + ++A  L  EM  +GV+P+++TF+ +I+  CK   
Sbjct: 434 MKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRN 493

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +     L   M  +G+ PD VTY +L+D       +  A  L+  M+  G   + +++  
Sbjct: 494 IKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 553

Query: 370 LINANCKDQKVEDAVCLYRE--------MLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
           L++   K+ ++ DA+  Y E         + +R     + +  L+ GL Q G +  A + 
Sbjct: 554 LVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRF 613

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET---YNCLING 478
              M+   V PD +++ + +    +   + + + +        C++ I+T    N ++N 
Sbjct: 614 FSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMML-------HCDM-IKTGILPNLMVNQ 665

Query: 479 LCKM-----GRLKTACKL 491
           L  M     G L++AC L
Sbjct: 666 LLAMFYQENGYLRSACFL 683



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 207/441 (46%), Gaps = 20/441 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F+ M      P + +++ ++    K         L+K +    L P++ V   L
Sbjct: 285 EEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTL 344

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK      A  +   +++    PN   +N LI+G C  G ++EA  L  ++     
Sbjct: 345 VDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNL 404

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V T+  LINGLC       A +LF+ M NE      P  VTYNS+I G CK+  ++K
Sbjct: 405 SPDVFTYTILINGLCTEERLAEANRLFQRMKNE---RIFPSSVTYNSLIHGFCKEYNIEK 461

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M    + PN+IT+++LI G+C V + K A  L+ EM   G+ PDVVT+  +I+
Sbjct: 462 ALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLID 521

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV--------- 353
            + K+  M +  RL   M++ G++P+  T+  L+DGF   GR+S A + ++         
Sbjct: 522 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGK 581

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
           S+V + C   V  +  LI   C++  +  A   + +M S  + P + +Y ++L    +  
Sbjct: 582 SIVQRSCWKYV-GFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREK 640

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR-------NCKCE 466
            + D + L   M    ++P+            +NG++  A  +  + R        C   
Sbjct: 641 RITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSACFLTNSSRLGTIFKNTCNSI 700

Query: 467 LRIETYNCLINGLCKMGRLKT 487
             I  ++C + G+C     KT
Sbjct: 701 FLITVFHCKMYGICISSIYKT 721



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 205/389 (52%), Gaps = 17/389 (4%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN+   +A   +  ++  +  P +  F  L+    K ++     SLF  +   G+ P+
Sbjct: 315 KTGNL--RQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPN 372

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           L+V N LI+  CK G    A  +L  +     +P+  T+  LINGLC E R+ EA RLF+
Sbjct: 373 LYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQ 432

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P+ VT+N+LI+G C+  N   AL L  EM +   +  +P+++T++++IDG C
Sbjct: 433 RMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTS---SGVEPNIITFSTLIDGYC 489

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   +  A  L  +M  + I P+V+TY +LI       + KEA  L+ +M++ G+ P+  
Sbjct: 490 KVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDH 549

Query: 296 TFNAMINYNCKDGKM-DKVNRLLE--------LMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           TF  +++   K+G++ D ++  LE         ++QR      V +  L++G C  G I 
Sbjct: 550 TFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSC-WKYVGFTCLIEGLCQNGYIL 608

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
           RA   F  M S G   D++SY  ++ A+ +++++ D + L+ +M+   I P+++  N LL
Sbjct: 609 RASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMV-NQLL 667

Query: 407 SGLFQV-GNLGDALKLIDKMQLNDVVPDS 434
           +  +Q  G L  A  L +  +L  +  ++
Sbjct: 668 AMFYQENGYLRSACFLTNSSRLGTIFKNT 696



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 158/318 (49%), Gaps = 1/318 (0%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+  G+ PDV  ++ +     K G   K  +LL+ M   GV P+   Y   +   C   +
Sbjct: 224 MISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENK 283

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A ++F  M   G   ++Y+Y+ +I+  CK   +  A  LY+E+L   + P+V+ + T
Sbjct: 284 MEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGT 343

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ G  +   L  A  L   M    V P+ + +   I G CK+G +LEA+ +   + +  
Sbjct: 344 LVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLN 403

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + TY  LINGLC   RL  A +LF R++++   P  VT +++IH  CKE  ++KA 
Sbjct: 404 LSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKAL 463

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           DL  +M +    P+ +TF TL+ G+ +       + L  +M   K +V D+   + ++D 
Sbjct: 464 DLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTI-KGIVPDVVTYTTLIDA 522

Query: 585 LSKDKKYRECLNQFRHLL 602
             K+   +E L  +  +L
Sbjct: 523 HFKEANMKEALRLYSDML 540



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 146/290 (50%)

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PD     A++N   +  + D V    +LMI RG+ PD   Y+ L       G  S+  +L
Sbjct: 196 PDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKL 255

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              M S G + +VY Y I I   C++ K+E+A  ++  M    + P++ TY+ ++ G  +
Sbjct: 256 LDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCK 315

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            GNL  A  L  ++ + +++P+   F T +DG CK   ++ A  +F  +     +  +  
Sbjct: 316 TGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYV 375

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YNCLI+G CK G +  A  L   ++     PDV T + +I+ LC E ++ +AN L   M+
Sbjct: 376 YNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMK 435

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            +   PS VT+ +L+ GF +     K + L  +M +  +  + ++ S+ +
Sbjct: 436 NERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLI 485



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 124/256 (48%)

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
           +PD+    ++++G     R       +  M+S+G   DV+ Y++L     K         
Sbjct: 195 SPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEK 254

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L  EM S  ++P+V  Y   +  L +   + +A K+ + M+++ VVP+ +T++  IDG C
Sbjct: 255 LLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYC 314

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G + +A  +++ I   +    +  +  L++G CK   L  A  LF  +   G  P++ 
Sbjct: 315 KTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLY 374

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             + +IH  CK G M +A  LL +ME+ N  P   T+  L+ G     + ++   L  +M
Sbjct: 375 VYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRM 434

Query: 566 AAEKLVVSDLSLSSKV 581
             E++  S ++ +S +
Sbjct: 435 KNERIFPSSVTYNSLI 450



 Score = 40.0 bits (92), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 25/244 (10%)

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIR----PSVITYNTLLSGLFQVGNLGDA 418
           D+ S++ +I+      K   A CL + ++ ER+R    P+ I++            L +A
Sbjct: 108 DLQSFSAVIHVLTGAHKYTLARCLIKSLI-ERLRRYSEPTNISHR-----------LFNA 155

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           L+ I   + +  V     F+  I    + G   +A+ V + +R   C    +    ++NG
Sbjct: 156 LEDIQSPKFSIGV-----FSLLIMEFLEMGLFEDALWVSREMR---CSPDSKACLAILNG 207

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L +  R  +    +  +  +G +PDV   S +     K+G   K   LL +M +    P+
Sbjct: 208 LVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPN 267

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
              +   +R   + NK  +   +   M     VV +L   S ++D   K    R+    +
Sbjct: 268 VYIYTIYIRDLCRENKMEEAEKMFELMKIHG-VVPNLYTYSAMIDGYCKTGNLRQAYGLY 326

Query: 599 RHLL 602
           + +L
Sbjct: 327 KEIL 330


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 262/534 (49%), Gaps = 41/534 (7%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +   EA   F  M   +  P   ++  ++       +++    L +RL   G  P 
Sbjct: 296 KAGRL--GEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 353

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N ++ CL K      A  +   +++    PN+ T+N +I+ LC  GR+ EA R+  
Sbjct: 354 VVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILD 412

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++   +  PN++T N +++ LC+ R    A K+FE   ++ G  C PD VTY S+IDGL 
Sbjct: 413 EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES-ASQRG--CNPDCVTYCSLIDGLG 469

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGF--------------------CCVD-- 273
           K G VD+A  L  +M D   N N + Y SLI  F                    C  D  
Sbjct: 470 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLT 529

Query: 274 -------------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
                        + ++ + +F ++   G  PDV +++ +I+   K G+  + + +   M
Sbjct: 530 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 589

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            Q+G   D   YN+++DGFC  G++ +A E+   M  K  +  V +Y  +++   K  ++
Sbjct: 590 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 649

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A  L+ E  S+ I  +V+ Y++L+ G  +VG + +A  ++++M    + P+ +T+ + 
Sbjct: 650 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 709

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           +D L K   + EA+  FQ+++  KC     TY+ LINGLC++ +   A   +  +Q +G 
Sbjct: 710 LDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 769

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +P+VVT +TMI  L K G +  A  L    +A   +P   +F  L+ G    N+
Sbjct: 770 VPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANR 823



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 240/488 (49%), Gaps = 4/488 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P +  + + +    K    D     F  L + GL PD      +I  LCK G    A  
Sbjct: 246 EPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEE 305

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  ++      P    +N +I G  + GR  +A +L ++L    C P+VV+FN+++  L 
Sbjct: 306 LFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLG 365

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + R    AL LFE M  +     +P+  TYN IID LC  G V++A  +L +M+  ++ P
Sbjct: 366 KKRKVDEALSLFEVMKKD----AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 421

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N++T N ++   C     +EA  +F      G  PD VT+ ++I+   K G++D+  RL 
Sbjct: 422 NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLF 481

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M+  G N + V Y SL+  F + GR     ++F  ++ +GC+ D+   N  ++   K 
Sbjct: 482 EKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKA 541

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +VE    ++ ++ S    P V +Y+ L+ GL + G   +   +   M+      D+  +
Sbjct: 542 GEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAY 601

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              +DG CK+G V +A ++ + ++    +  + TY  +++GL K+ RL  A  LF   + 
Sbjct: 602 NAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS 661

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           KG   +VV  S++I    K G++D+A  +L +M  K   P+  T+ +LL   V+  + ++
Sbjct: 662 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINE 721

Query: 558 VVVLLHKM 565
            +V    M
Sbjct: 722 ALVCFQSM 729



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 223/462 (48%), Gaps = 38/462 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA    D M      P + +  I++  L K ++ +    +F+  +  G  PD      L
Sbjct: 405 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 464

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K G    A+ +  ++L +    N V +  LI      GR  +  ++FK+L    C
Sbjct: 465 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 524

Query: 183 DPNVVTFNT-----------------------------------LINGLCRTRNTLVALK 207
            P++   NT                                   LI+GL +         
Sbjct: 525 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 584

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +F  M  +  A+   D   YN+++DG CK G V KA E+L +MK++ + P V TY +++ 
Sbjct: 585 IFHAMKQQGFAL---DARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 641

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G   +D   EA  LF E    G++ +VV ++++I+   K G++D+   +LE M+++G+ P
Sbjct: 642 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 701

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           +  T+NSL+D       I+ A   F SM    C  + Y+Y+ILIN  C+ QK   A   +
Sbjct: 702 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 761

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           ++M  + + P+V+TY T++SGL +VGN+ DA  L ++ + N  +PD+ +F   I+G+   
Sbjct: 762 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNA 821

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
              +EA QVF+  R   C + I++   L++ L K   L+ A 
Sbjct: 822 NRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAA 863



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 205/456 (44%), Gaps = 5/456 (1%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A + +  + R  F P    +  LI  L    R   A  L +++     +  V  F TL+ 
Sbjct: 163 AVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVR 222

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
            L R      AL L +E+    G+  +PD+V YN  ID   K G VD A +   ++K + 
Sbjct: 223 ALAREGQVADALALVDEVK---GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQG 279

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + P+ ++Y S+I   C      EA+ LF +M      P    +N MI      G+ +   
Sbjct: 280 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 339

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           +LLE + +RG  P  V++NS++       ++  A  LF  M  K    +  +YNI+I+  
Sbjct: 340 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDML 398

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   +VE+A  +  EM    + P+++T N ++  L +   L +A K+ +        PD 
Sbjct: 399 CLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDC 458

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+ + IDGL K G V EA ++F+ + +         Y  LI      GR +   K+F  
Sbjct: 459 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 518

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           L  +G  PD+   +T +  + K G+++K   +  D+ +   +P   ++  L+ G  +  +
Sbjct: 519 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 578

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
             +   + H M  +   + D    + VVD   K  K
Sbjct: 579 ARETSNIFHAMKQQGFAL-DARAYNAVVDGFCKSGK 613



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 197/409 (48%), Gaps = 9/409 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +  +EA   F+ M+    +     +T L+     + + +    +FK L   G  PD
Sbjct: 470 KKGQV--DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 527

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           L +LN  ++C+ K G      ++   I    F P+  +++ LI+GL   G+  E + +F 
Sbjct: 528 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 587

Query: 176 --KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             K   FA D     +N +++G C++     A ++ EEM  +     +P V TY +I+DG
Sbjct: 588 AMKQQGFALDAR--AYNAVVDGFCKSGKVHKAYEILEEMKEK---CVQPTVATYGAIVDG 642

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           L K   +D+A  L  + K + I  NV+ Y+SLI GF  V    EA  +  EMM  G+ P+
Sbjct: 643 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 702

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           V T+N++++   K  ++++     + M +    P+T TY+ L++G C V + ++A   + 
Sbjct: 703 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 762

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M  +G   +V +Y  +I+   K   + DA  L+    +    P   ++N L+ G+    
Sbjct: 763 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 822

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
              +A ++ ++ +L     +  +  + +D L K+  + +A  V   +R 
Sbjct: 823 RAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLRE 871



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 8/293 (2%)

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++D     + +M +    P    Y  L+       R  RA EL   M   G    V+ + 
Sbjct: 159 RLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFT 218

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L+ A  ++ +V DA+ L  E+    + P ++ YN  +    + GN+  A K   +++  
Sbjct: 219 TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQ 278

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVF---QAIRNCKCELRIETYNCLINGLCKMGRL 485
            + PD  ++ + I  LCK G + EA ++F   +A R+  C      YN +I G    GR 
Sbjct: 279 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY---AYNTMIMGYGSAGRF 335

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A KL  RL+ +G IP VV+ ++++  L K+ ++D+A  L   M+ K+  P+  T+  +
Sbjct: 336 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNII 394

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           +       +  +   +L +M    L  + L+++  +VD L K +K  E    F
Sbjct: 395 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI-MVDRLCKARKLEEAYKIF 446



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 1/229 (0%)

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L  A  + ++++DAV     M   + RP+   Y  L+  L +      AL+L+ +MQ   
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
                  F T +  L + G V +A+ +   ++    E  I  YN  I+   K G +  A 
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           K FH L+ +G  PD V+ ++MI  LCK G++ +A +L   MEA+  VP    + T++ G+
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
               +      LL ++     + S +S +S ++  L K +K  E L+ F
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNS-ILTCLGKKRKVDEALSLF 377


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 262/534 (49%), Gaps = 41/534 (7%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +   EA   F  M   +  P   ++  ++       +++    L +RL   G  P 
Sbjct: 30  KAGRL--GEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 87

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N ++ CL K      A  +   +++    PN+ T+N +I+ LC  GR+ EA R+  
Sbjct: 88  VVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILD 146

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++   +  PN++T N +++ LC+ R    A K+FE   ++ G  C PD VTY S+IDGL 
Sbjct: 147 EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES-ASQRG--CNPDCVTYCSLIDGLG 203

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGF--------------------CCVD-- 273
           K G VD+A  L  +M D   N N + Y SLI  F                    C  D  
Sbjct: 204 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLT 263

Query: 274 -------------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
                        + ++ + +F ++   G  PDV +++ +I+   K G+  + + +   M
Sbjct: 264 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 323

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            Q+G   D   YN+++DGFC  G++ +A E+   M  K  +  V +Y  +++   K  ++
Sbjct: 324 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 383

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A  L+ E  S+ I  +V+ Y++L+ G  +VG + +A  ++++M    + P+ +T+ + 
Sbjct: 384 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 443

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           +D L K   + EA+  FQ+++  KC     TY+ LINGLC++ +   A   +  +Q +G 
Sbjct: 444 LDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 503

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +P+VVT +TMI  L K G +  A  L    +A   +P   +F  L+ G    N+
Sbjct: 504 VPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANR 557



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 233/463 (50%), Gaps = 4/463 (0%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            F  L + GL PD      +I  LCK G    A  +  ++      P    +N +I G  
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
           + GR  +A +L ++L    C P+VV+FN+++  L + R    AL LFE M  +     +P
Sbjct: 65  SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD----AEP 120

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +  TYN IID LC  G V++A  +L +M+  ++ PN++T N ++   C     +EA  +F
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
                 G  PD VT+ ++I+   K G++D+  RL E M+  G N + V Y SL+  F + 
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           GR     ++F  ++ +GC+ D+   N  ++   K  +VE    ++ ++ S    P V +Y
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           + L+ GL + G   +   +   M+      D+  +   +DG CK+G V +A ++ + ++ 
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              +  + TY  +++GL K+ RL  A  LF   + KG   +VV  S++I    K G++D+
Sbjct: 361 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDE 420

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           A  +L +M  K   P+  T+ +LL   V+  + ++ +V    M
Sbjct: 421 AYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 463



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 206/429 (48%), Gaps = 38/429 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA    D M      P + +  I++  L K ++ +    +F+  +  G  PD      L
Sbjct: 139 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 198

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K G    A+ +  ++L +    N V +  LI      GR  +  ++FK+L    C
Sbjct: 199 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 258

Query: 183 DPNVVTFNT-----------------------------------LINGLCRTRNTLVALK 207
            P++   NT                                   LI+GL +         
Sbjct: 259 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 318

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +F  M  +  A+   D   YN+++DG CK G V KA E+L +MK++ + P V TY +++ 
Sbjct: 319 IFHAMKQQGFAL---DARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 375

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G   +D   EA  LF E    G++ +VV ++++I+   K G++D+   +LE M+++G+ P
Sbjct: 376 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 435

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           +  T+NSL+D       I+ A   F SM    C  + Y+Y+ILIN  C+ QK   A   +
Sbjct: 436 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 495

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           ++M  + + P+V+TY T++SGL +VGN+ DA  L ++ + N  +PD+ +F   I+G+   
Sbjct: 496 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNA 555

Query: 448 GFVLEAVQV 456
              +EA Q 
Sbjct: 556 NRAMEAYQA 564



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 208/418 (49%), Gaps = 5/418 (1%)

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A + F +L      P+ V++ ++I  LC+      A +LF +M  E    C      YN+
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC---AYAYNT 58

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I G    G  + A +LL ++++R   P+V+++NS++          EA  LF E+M   
Sbjct: 59  MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKD 117

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
            +P+  T+N +I+  C  G++++  R+L+ M    + P+ +T N ++D  C   ++  A 
Sbjct: 118 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 177

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           ++F S   +GC  D  +Y  LI+   K  +V++A  L+ +ML      + + Y +L+   
Sbjct: 178 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 237

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
           F  G   D  K+  ++      PD     TY+D + K G V +   +F+ IR+      +
Sbjct: 238 FIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 297

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            +Y+ LI+GL K G+ +    +FH ++ +G   D    + ++   CK G++ KA ++L +
Sbjct: 298 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 357

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           M+ K   P+  T+  ++ G  + ++  +  +L  + A  K +  ++ L S ++D   K
Sbjct: 358 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE-AKSKGIELNVVLYSSLIDGFGK 414



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 1/112 (0%)

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A K FH L+ +G  PD V+ ++MI  LCK G++ +A +L   MEA+  VP    + T++ 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
           G+    +      LL ++     + S +S +S ++  L K +K  E L+ F 
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNS-ILTCLGKKRKVDEALSLFE 112


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 244/499 (48%), Gaps = 53/499 (10%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L++ L +    + + SL   +    L P++ + N +I+ LCK    S A VV
Sbjct: 327 PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVV 386

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L ++      P+ +TF+ LI+GLC EGR+ EA RL ++   +  +PN+ ++ +LI+G C 
Sbjct: 387 LKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCV 446

Query: 199 TRNTLVALKLFEEMVNE--------FGAICK------------------------PDVVT 226
               +VA  L  EM+          FGA+                          PD   
Sbjct: 447 RGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANI 506

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN +I GLCK   +  A+ L+ +M ++N++P+   Y +LI GF   +   EA+ +F  M 
Sbjct: 507 YNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFME 566

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G+ PDVV +NAMI   C+ G M++    +  M + G  PD  TY +L+ G+   G IS
Sbjct: 567 QKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNIS 626

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  L   M+ + C+ +V +Y+ LIN  CK    + A CL+  M S+ + P+VITY  L+
Sbjct: 627 GALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILI 686

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN------------------G 448
             LF+   +  A    + M LN   P+ +T  + + GLC +                  G
Sbjct: 687 GSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKG 746

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            +L+   +F+A+ N +C+ R   YN +I  LC    L  A  L +++ +KG  PD  T  
Sbjct: 747 ALLD---IFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFL 803

Query: 509 TMIHWLCKEGQMDKANDLL 527
           ++++  C  G+  +   +L
Sbjct: 804 SLLYGFCSVGKSREWRTIL 822



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 230/439 (52%), Gaps = 3/439 (0%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G  P+    N+LI+  C+ G      ++LG +      P  VT+  L++ L  +G + + 
Sbjct: 289 GCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKI 348

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
           A L  ++      PNV  +N++I+ LC+ R+   AL + ++M   F   C PD +T++++
Sbjct: 349 ASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQM---FAGGCDPDAITFSTL 405

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           I GLC++G V +A+ LL +     +NPN+ +Y SLI GFC   +   A  L +EMM+ G 
Sbjct: 406 ISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGH 465

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PDVVTF A+I+     G++ +   + E M  R + PD   YN L+ G C    +  AR 
Sbjct: 466 TPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARN 525

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           L   M+ +    D Y Y  LI+   +++ +++A  ++  M  + I P V+ YN ++ G  
Sbjct: 526 LIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYC 585

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           Q G + +A++ +  M+    +PD FT+ T I G  K G +  A+ +   +   +C+  + 
Sbjct: 586 QFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVV 645

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            Y+ LING CK+G    A  LF  ++ +G  P+V+T + +I  L K+ ++ +A      M
Sbjct: 646 AYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYM 705

Query: 531 EAKNCVPSEVTFCTLLRGF 549
               C P++ T  +L+ G 
Sbjct: 706 LLNQCSPNDYTLHSLVTGL 724



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 229/447 (51%), Gaps = 4/447 (0%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           ++ GLC EG + +  +L +      C PN V +N LI+G CR  +    + L  EM  + 
Sbjct: 265 MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAK- 323

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
           G +  P VVTY +++  L + G ++K   LL +M++R + PNV  YNS+I   C      
Sbjct: 324 GLL--PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSAS 381

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  +  +M   G  PD +TF+ +I+  C++G++ +  RLL    +  +NP+  +Y SL+
Sbjct: 382 QALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLI 441

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            GFC+ G +  A  L V M+ +G   DV ++  LI+      +V +A+ +  +M + ++ 
Sbjct: 442 HGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLL 501

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P    YN L+SGL +   L  A  LI++M   +V PD + + T IDG  +N  + EA ++
Sbjct: 502 PDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKI 561

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F+ +        +  YN +I G C+ G +  A +    ++  G IPD  T +T+I    K
Sbjct: 562 FEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAK 621

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +G +  A  LL DM  + C P+ V + +L+ G+ +         L   M ++ L  + ++
Sbjct: 622 QGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVIT 681

Query: 577 LSSKVVDLLSKDKKYRECLNQFRHLLF 603
            +  +  L  KDK  R  +  F ++L 
Sbjct: 682 YTILIGSLFKKDKVVRAAM-YFEYMLL 707



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 241/510 (47%), Gaps = 11/510 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG-ITSGAFV 137
           PG T    LL +L + +++D    L+  + +     D +   +++  LC  G +  G  +
Sbjct: 222 PGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKL 281

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  R    C  PN V +N LI+G C  G +     L  ++      P VVT+ TL++ L 
Sbjct: 282 IEARWGAGC-VPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLG 340

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  +      L  EM         P+V  YNS+ID LCK     +A  +L QM     +P
Sbjct: 341 RKGDLEKIASLLSEMRERR---LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDP 397

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + IT+++LI G C     +EA+ L  E     + P++ ++ ++I+  C  G++   + LL
Sbjct: 398 DAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLL 457

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M++RG  PD VT+ +L+ G  + G++S A  +   M ++    D   YN+LI+  CK 
Sbjct: 458 VEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKK 517

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           + +  A  L  EML + + P    Y TL+ G  +  +L +A K+ + M+   + PD   +
Sbjct: 518 KMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGY 577

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE---TYNCLINGLCKMGRLKTACKLFHR 494
              I G C+ G + EAV+    +R      RI    TY  LI G  K G +  A  L   
Sbjct: 578 NAMIKGYCQFGMMNEAVECMSTMRKVG---RIPDEFTYTTLIGGYAKQGNISGALSLLCD 634

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  +   P+VV  S++I+  CK G  D A  L   ME++   P+ +T+  L+    + +K
Sbjct: 635 MMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDK 694

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
             +  +    M   +   +D +L S V  L
Sbjct: 695 VVRAAMYFEYMLLNQCSPNDYTLHSLVTGL 724



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 176/377 (46%), Gaps = 23/377 (6%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++   +P + +F  L+  L    Q    + + +++ +  L PD  + N+LI+ LCK  +
Sbjct: 460 MMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKM 519

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  ++  +L     P+   +  LI+G      + EA ++F+ +      P+VV +N 
Sbjct: 520 LPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNA 579

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I G C+      A++    M  + G I  PD  TY ++I G  K G +  A  LL  M 
Sbjct: 580 MIKGYCQFGMMNEAVECMSTM-RKVGRI--PDEFTYTTLIGGYAKQGNISGALSLLCDMM 636

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R   PNV+ Y+SLI G+C + D   A+CLF  M   G+ P+V+T+  +I    K  K+ 
Sbjct: 637 KRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVV 696

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +     E M+    +P+  T +SL+ G C             S++S  C   V       
Sbjct: 697 RAAMYFEYMLLNQCSPNDYTLHSLVTGLC---------NSMASIISSHCSSTV------- 740

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N + K   ++    ++R ++++R  P    YN ++  L     LG+AL L +KM      
Sbjct: 741 NLHGKGALLD----IFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYK 796

Query: 432 PDSFTFATYIDGLCKNG 448
           PDS TF + + G C  G
Sbjct: 797 PDSATFLSLLYGFCSVG 813



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 170/383 (44%), Gaps = 2/383 (0%)

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN-PNVITYNSLICGFCCVDDW 275
            A   P      +++      G   KA E+  + ++ +   P     N L+        W
Sbjct: 181 AAAAVPTRACLGALVATYADAGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRW 240

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            +A+ L+ EM+      D  +   M+   C +G ++K  +L+E     G  P+ V YN L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +DG+C  G + R   L   M +KG    V +Y  L++   +   +E    L  EM   R+
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P+V  YN+++  L +  +   AL ++ +M      PD+ TF+T I GLC+ G V EA +
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           + +     +    + +Y  LI+G C  G +  A  L   +  +G  PDVVT   +IH L 
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
             GQ+ +A  +   M A+  +P    +  L+ G  +         L+ +M  E+ V  D 
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEM-LEQNVHPDK 539

Query: 576 SLSSKVVDLLSKDKKYRECLNQF 598
            + + ++D   +++   E    F
Sbjct: 540 YVYTTLIDGFIRNESLDEARKIF 562



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 156/315 (49%), Gaps = 1/315 (0%)

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           +G  P     N ++    +  + D   +L + M+      D  +   ++ G CL G + +
Sbjct: 218 HGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEK 277

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
             +L  +    GC  +   YN+LI+  C+   V   + L  EM ++ + P+V+TY TL+S
Sbjct: 278 GLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMS 337

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
            L + G+L     L+ +M+   + P+   + + ID LCK     +A+ V + +    C+ 
Sbjct: 338 WLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDP 397

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
              T++ LI+GLC+ GR++ A +L          P++ + +++IH  C  G++  A++LL
Sbjct: 398 DAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLL 457

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           ++M  +   P  VTF  L+ G V   + S+ +++  KMAA +L + D ++ + ++  L K
Sbjct: 458 VEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQL-LPDANIYNVLISGLCK 516

Query: 588 DKKYRECLNQFRHLL 602
            K      N    +L
Sbjct: 517 KKMLPAARNLIEEML 531



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 143/342 (41%), Gaps = 37/342 (10%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P    +T L+    +N+  D    +F+ +   G+ PD+   N +I   C+ G+
Sbjct: 530 MLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGM 589

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + A   +  + +    P+  T+  LI G   +G I  A  L   +    C PNVV +++
Sbjct: 590 MNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSS 649

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LING C+  +T  A  LF  M ++      P+V+TY  +I  L K   V +A      M 
Sbjct: 650 LINGYCKLGDTDAAECLFGSMESQG---LFPNVITYTILIGSLFKKDKVVRAAMYFEYML 706

Query: 252 DRNINPNVITYNSLICGFC-CVDDWKEAKC--------------LFIEMMDNGVQPDVVT 296
               +PN  T +SL+ G C  +     + C              +F  ++++   P    
Sbjct: 707 LNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSA 766

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR------------ 344
           +NA+I   C    + +   L   M  +G  PD+ T+ SL+ GFC VG+            
Sbjct: 767 YNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEF 826

Query: 345 -------ISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
                   SR + LF   V K    +VYS   L    C+  K
Sbjct: 827 QRDELEVASRYKILFDQYVVKSVGCEVYSVFQLYLEECRSSK 868



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 18/235 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEAV     M K+   P   ++T L+   AK       +SL   +      P++   + L
Sbjct: 591 NEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSL 650

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK+G T  A  + G +      PN +T+  LI  L  + +++ AA  F+ + +  C
Sbjct: 651 INGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQC 710

Query: 183 DPNVVTFNTLINGLCRTRNTLVA---------------LKLFEEMVNEFGAICKPDVVTY 227
            PN  T ++L+ GLC +  ++++               L +F  +VN+    C P    Y
Sbjct: 711 SPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDR---CDPRNSAY 767

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           N+II  LC    + +A +L  +M ++   P+  T+ SL+ GFC V   +E + + 
Sbjct: 768 NAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTIL 822


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 261/503 (51%), Gaps = 12/503 (2%)

Query: 24  CSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTS 83
             F +P  P  D    H      + K LN   ++G    NE++YF + ++     P +  
Sbjct: 48  AEFRQPHFPNLDNRDAH------LMKLLNRSCRAGK--HNESLYFLESVVSKGFKPDVVL 99

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
            T L+     ++     + + + L + G  PD++  N +I+   K      A  V  R+ 
Sbjct: 100 CTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMR 158

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
              F+P+ VT+N +I  LC+ G++  A  +  +L    C P+V+T+  LI          
Sbjct: 159 SRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRIN 218

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            AL+LF+E+V+      +PD+ TYN+II G+CK+G  D+A + +  +  R  NP+V++YN
Sbjct: 219 EALELFDELVSRG---LRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYN 275

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            L+  F     W++ + L  +M+ +G +P+VVT + +I+  C++G++ +   +LE+M ++
Sbjct: 276 ILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEK 335

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD+ +Y+ L+  FC  GR+  A E    MVS GC  D+ +YN ++   CK    + A
Sbjct: 336 GLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLA 395

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + ++ ++      P+V  YNT+ S L+  GN   AL++I +M    + PD  T+ + I  
Sbjct: 396 LDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISC 455

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC++G V EA+ +   +   + +  + ++N ++ G+CK  R+    +L   +  KG +P+
Sbjct: 456 LCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPN 515

Query: 504 VVTCSTMIHWLCKEGQMDKANDL 526
             +   +I  +   G   +A +L
Sbjct: 516 ETSYVLLIEGIAYAGWRAEAMEL 538



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 229/444 (51%), Gaps = 4/444 (0%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N  C+ G  + +   L  ++   F P+ V    LI G      + +A R+ + L  + 
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            DP+V ++N +I+G  +      A ++F+ M +   +   PDVVTYN +I  LC  G ++
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFS---PDVVTYNIMIGSLCSRGKLE 183

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A E++ ++      P+VITY  LI          EA  LF E++  G++PD+ T+NA+I
Sbjct: 184 LAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAII 243

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              CK+G  D+    +  +  RG NPD V+YN L+  F    R      L   MV  GC 
Sbjct: 244 RGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCE 303

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +V +++ILI++ C++ +V +AV +   M  + + P   +Y+ L+S   + G L  A++ 
Sbjct: 304 PNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEY 363

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ++KM  +  +PD   + T +  LCK G    A+ VF+ +    C   +  YN + + L  
Sbjct: 364 LEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWS 423

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G    A ++   +  KG  PD +T +++I  LC++G +D+A  LL+DMEA    P+ ++
Sbjct: 424 CGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVIS 483

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
           F  +L G  + ++  + + LL  M
Sbjct: 484 FNIVLLGMCKAHRVFEGIELLITM 507



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 197/417 (47%), Gaps = 38/417 (9%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+  +++  +K  Q D+   +F R+ S G  PD+   N++I  LC  G    AF V
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  +L+    P+ +T+  LI     EGRI EA  LF +L      P++ T+N +I G+C+
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 AL     +       C PDVV+YN ++         +  + L+  M      PN
Sbjct: 249 EGMEDRALDFVRHLS---ARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPN 305

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+T++ LI  FC     +EA  +   M + G+ PD  +++ +I+  CK+G++D     LE
Sbjct: 306 VVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLE 365

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRIS-------------------------------- 346
            M+  G  PD V YN+++   C  G                                   
Sbjct: 366 KMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCG 425

Query: 347 ---RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
              +A E+   M+ KG   D  +YN LI+  C+D  V++A+ L  +M + R +P+VI++N
Sbjct: 426 NKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFN 485

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            +L G+ +   + + ++L+  M     +P+  ++   I+G+   G+  EA+++  ++
Sbjct: 486 IVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 148/504 (29%), Positives = 248/504 (49%), Gaps = 4/504 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++ +   + M+++   P   + + L+  L K    D+   L  +L   G  P+LFV N L
Sbjct: 305 DDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNAL 364

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LCK      A ++   +       N VT++ LI+  C  G +  A   F ++     
Sbjct: 365 INALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGI 424

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
              +  +N+LING C+  +   A  L+ +M+NE     +P   T+ ++I G CKD  V+K
Sbjct: 425 RETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG---LEPTATTFTTLISGYCKDLQVEK 481

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M ++ I P+V T+ +LI G C  ++  EA  LF EM++  ++P  VT+N MI 
Sbjct: 482 AFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIE 541

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK   MDK   LLE M+  G+ PDT TY  L+ G C  GR+S A++    +  K  + 
Sbjct: 542 GYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKL 601

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +   Y+ L++  C   ++ +A+    EM+   I   ++ +  L+ G  +  ++     L+
Sbjct: 602 NEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLL 661

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            KM    + PDS  + + ID   K G   ++ +    +   KC   + TY   +NGLCK+
Sbjct: 662 KKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKV 721

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G +  A  LF ++      P+ VT    +  L KEG M +A DL  +M  K  + +  T+
Sbjct: 722 GEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM-LKGLLANTATY 780

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMA 566
             L+RGF +  +  +   +L +M 
Sbjct: 781 NILIRGFCKLGRLIEATKVLSEMT 804



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/488 (31%), Positives = 238/488 (48%), Gaps = 4/488 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +++IL+    K    D   S F R+  +G+   ++  N LIN  CK G  S A  +  ++
Sbjct: 395 TYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKM 454

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +     P   TF  LI+G C + ++ +A +L++++N     P+V TF  LI GLC T   
Sbjct: 455 INEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEM 514

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A KLF+EMV       KP  VTYN +I+G CK   +DKA ELL  M    + P+  TY
Sbjct: 515 AEASKLFDEMVER---KIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTY 571

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             LI G C       AK    ++    ++ + + ++A+++  C  G++ +       MIQ
Sbjct: 572 RPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQ 631

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RG+N D V +  L+DG      + R   L   M  +G R D   Y  +I+A  K+   + 
Sbjct: 632 RGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKK 691

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           +      M++E+  P+V+TY   ++GL +VG +  A  L +KM   ++ P+S T+  ++D
Sbjct: 692 SGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLD 751

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
            L K G + EA  +   +          TYN LI G CK+GRL  A K+   +   G  P
Sbjct: 752 SLTKEGNMKEATDLHHEMLKGLLA-NTATYNILIRGFCKLGRLIEATKVLSEMTENGIFP 810

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D +T ST+I+  C+ G +  A +L   M  K   P  V F  L+ G   N    K   L 
Sbjct: 811 DCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELR 870

Query: 563 HKMAAEKL 570
           + M +  L
Sbjct: 871 NDMLSRGL 878



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 159/591 (26%), Positives = 255/591 (43%), Gaps = 102/591 (17%)

Query: 30  PNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCM-IKMKPSPGMTSFTILL 88
           P+  + L  HH +        +N  H S       A+ FF+ + +    +   TSF IL+
Sbjct: 54  PSISSTLKPHHVEQ-----VLINTLHDS-----KLALRFFNFLGLHKNMNHTTTSFAILV 103

Query: 89  TMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT 148
             L +NK +    SL   L   G  P  FV    +                    + C  
Sbjct: 104 HALVQNKLFWPANSLLHTLLLRGSDPK-FVFEKFLESH-----------------KQCKF 145

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
            +T+ F+FL++      R+ +A  + + +      P V T + ++NGL R R  ++  ++
Sbjct: 146 SSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEV 205

Query: 209 FEEMVNEFGAICKPD-----------------------------------VVTYNSIIDG 233
           F+E VN   A  KPD                                   +VTYN +I G
Sbjct: 206 FDESVN---AGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHG 262

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD------ 287
           LCK G V +A E+   ++++ +  +V+TY +L+ GFC V  + +  CL  EM++      
Sbjct: 263 LCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPT 322

Query: 288 -----------------------------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
                                         G  P++  +NA+IN  CK   +DK   L +
Sbjct: 323 EAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYK 382

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M    +  + VTY+ L+D FC  G +  A   F  M+  G R  +Y YN LIN +CK  
Sbjct: 383 NMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFG 442

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +  A  LY +M++E + P+  T+ TL+SG  +   +  A KL  +M   ++ P  +TF 
Sbjct: 443 DLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFT 502

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I GLC    + EA ++F  +   K +    TYN +I G CK   +  A +L   + H 
Sbjct: 503 ALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHN 562

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           G +PD  T   +I  LC  G++  A D + D+  KN   +E+ +  LL G+
Sbjct: 563 GLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGY 613



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 196/421 (46%), Gaps = 13/421 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   FD M++ K  P   ++ +++    K    D    L + +  NGL PD +    LI
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC  G  S A   +  + +     N + ++ L++G C +GR+ EA     ++     +
Sbjct: 576 SGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGIN 635

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            ++V    LI+G  + ++      L ++M ++     +PD V Y S+ID   K+G   K+
Sbjct: 636 MDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQG---LRPDSVIYTSMIDAYSKEGSFKKS 692

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E L  M      PNV+TY + + G C V +   A  LF +M+   + P+ VT+   ++ 
Sbjct: 693 GECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDS 752

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K+G M +   L   M+ +G+  +T TYN L+ GFC +GR+  A ++   M   G   D
Sbjct: 753 LTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPD 811

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y+ +I  +C+   V  AV L+  ML + + P  + +N L+ G    G L  A +L +
Sbjct: 812 CITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRN 871

Query: 424 KMQLNDVVPDSFTFATYID---------GLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
            M    + P         D         G C  G V  A++++ ++     +L +E + C
Sbjct: 872 DMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKC 931

Query: 475 L 475
           L
Sbjct: 932 L 932



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/494 (24%), Positives = 198/494 (40%), Gaps = 58/494 (11%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V  +LIN L    +    F  LG  L       T +F  L++ L        A  L   L
Sbjct: 65  VEQVLINTLHDSKLALRFFNFLG--LHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTL 122

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
            +   DP  V                     FE+ +           + ++ ++    ++
Sbjct: 123 LLRGSDPKFV---------------------FEKFLESHKQCKFSSTLGFDFLVHSYLQN 161

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             V  A  +L  M    + P V T ++++ G   +  +     +F E ++ GV+PD  T 
Sbjct: 162 TRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTC 221

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           +A+I   C+     +    +  M     +   VTYN L+ G C  G +  A E+  S+  
Sbjct: 222 SAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLRE 281

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           KG + DV +Y  L+   C+ Q+ +D +CL  EM+     P+    + L+ GL + GN+  
Sbjct: 282 KGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDS 341

Query: 418 ALKLIDKMQLNDVVPDSF-----------------------------------TFATYID 442
           A  L+ K+     +P+ F                                   T++  ID
Sbjct: 342 AYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILID 401

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
             CK G +  A   F  +        I  YN LING CK G L  A  L+ ++ ++G  P
Sbjct: 402 SFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEP 461

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
              T +T+I   CK+ Q++KA  L  +M  K   PS  TF  L+ G    N+ ++   L 
Sbjct: 462 TATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLF 521

Query: 563 HKMAAEKLVVSDLS 576
            +M   K+  ++++
Sbjct: 522 DEMVERKIKPTEVT 535


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 218/403 (54%), Gaps = 8/403 (1%)

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            +N LI+     G   +A  +++ +      P+  TFN L+N   + +      KLFEEM
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
            N+    C P+V+TY+ +ID +CK G V+KA ++ L MK R   PN+ TY S+I G    
Sbjct: 151 QNQN---CSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKS 207

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
               +A  LF EM   G+    V +N++I+   + G+ D   +L   M+ +G+ PD VT+
Sbjct: 208 GHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTF 267

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
            SL+ G  + GR S AR +F      GC  DV  YN+LI+  CK +++++A  ++ E+  
Sbjct: 268 TSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEE 327

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           + + P V T+N L+ GL + G + DA  L+  M+     PD   + T IDGL K+G V E
Sbjct: 328 DGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEE 387

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A Q+   +++   E  + TYN LI+  CK GR++ A +LF  +  KG   + VT +T+++
Sbjct: 388 AGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG-FANTVTYNTILN 446

Query: 513 WLCKEGQMDKANDLLLDMEAKNC----VPSEVTFCTLLRGFVQ 551
            LC  G++D+A  L   M+ +       P  VT+ TLL G  Q
Sbjct: 447 GLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQ 489



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 185/349 (53%), Gaps = 2/349 (0%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           I +P +  +  +  G    G ++K+ E L +M+          YNSLI  F      ++A
Sbjct: 51  ILQPRI--FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKA 108

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             ++  M  +G++PD  TFN ++N   K  ++D V +L E M  +  +P+ +TY+ L+D 
Sbjct: 109 LAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDA 168

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C  G + +A ++F+ M S+GCR ++++Y  +I+   K   V+ A  L+ EM SE +  +
Sbjct: 169 VCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVAT 228

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            + YN+L+ GL + G    A KL  +M    + PD  TF + + GL   G   EA ++FQ
Sbjct: 229 RVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQ 288

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
             R+  C L +  YN LI+ LCK  RL  A ++F  L+  G +PDV T + ++  LCK G
Sbjct: 289 EARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSG 348

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           ++  A  LL DM+   C P    + TL+ G  ++ +  +   LL +M +
Sbjct: 349 RIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQS 397



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 180/350 (51%), Gaps = 8/350 (2%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            F+ M     SP + +++IL+  + K    +  + +F  + S G  P++F    +I+ L 
Sbjct: 146 LFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLG 205

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    AF +   +         V +N LI+GL   GR   AA+LF+++      P+ V
Sbjct: 206 KSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHV 265

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           TF +L+ GL        A ++F+E   + G  C  DV  YN +ID LCK   +D+A E+ 
Sbjct: 266 TFTSLVYGLGVAGRASEARRIFQE-ARDVG--CALDVNLYNVLIDTLCKSKRLDEAWEIF 322

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            ++++  + P+V T+N+L+ G C      +A  L  +M   G  PDV  +N +I+   K 
Sbjct: 323 GELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKS 382

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G++++  +LL  M   G  PD VTYN+L+D  C  GRI  A  LF  + +KG  + V +Y
Sbjct: 383 GRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTV-TY 441

Query: 368 NILINANCKDQKVEDAVCLYREMLSER----IRPSVITYNTLLSGLFQVG 413
           N ++N  C   +V++A  L+  M  E     I P  +TY TLL+G  Q G
Sbjct: 442 NTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 8/259 (3%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++ A   F  M+     P   +FT L+  L    +      +F+     G   D+ + N+
Sbjct: 245 ADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNV 304

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+ LCK      A+ + G +      P+  TFN L++GLC  GRI +A  L   +    
Sbjct: 305 LIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG 364

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P+V  +NTLI+GL ++     A +L  EM    G   +PDVVTYN++ID  CK G ++
Sbjct: 365 CTPDVTVYNTLIDGLRKSGRVEEAGQLLLEM-QSLG--YEPDVVTYNTLIDESCKGGRIE 421

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF----IEMMDNGVQPDVVTF 297
            A  L  ++  +    N +TYN+++ G C      EA  LF     E +D  + PD VT+
Sbjct: 422 DALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTY 480

Query: 298 NAMINYNCKDGKMDKVNRL 316
             ++N   + G  +  N L
Sbjct: 481 TTLLNGARQAGLSELANSL 499



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 103/205 (50%)

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +E +V   + M   R   +   YN+L+    + G    AL +   M  + + PD++TF  
Sbjct: 70  LEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNV 129

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            ++   K   V    ++F+ ++N  C   + TY+ LI+ +CK G ++ A K+F  ++ +G
Sbjct: 130 LMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRG 189

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P++ T ++MI  L K G +DKA  L  +M ++  V + V + +L+ G  ++ +     
Sbjct: 190 CRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAA 249

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDL 584
            L  +M ++ L    ++ +S V  L
Sbjct: 250 KLFREMLSKGLQPDHVTFTSLVYGL 274


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 151/532 (28%), Positives = 276/532 (51%), Gaps = 19/532 (3%)

Query: 66  VYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           ++ +  M   K  P   +F +L++ L +    +    +F +++  G  P+ F L +L+  
Sbjct: 138 IWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG 197

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
            C+ G+ S    +L  +  S   PN V +N +I+ LC EG+ +EA +L +K+      P+
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +VTFN  I  LC++   L A ++F +M ++E   + KP+ VTYN +++G C +G  ++A+
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            +   MK+     ++ +YN  + G        EA  +  EM +  ++P++ ++N +++  
Sbjct: 318 AIFDSMKNSE-TLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGL 376

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK G       +L LM + GV PDTVTY++L+ G+C  G+I  A  +   M+  GC  ++
Sbjct: 377 CKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNM 436

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           Y+ NIL+++  K+ +  +A  L + M         +T NT+++GL + GNL  A++++  
Sbjct: 437 YTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSG 496

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC--KCELRIETYNCLINGLCKM 482
           M         +T  +   G   N F    + +F  IRN   KC     TY  +I GLCK+
Sbjct: 497 M---------WTRGSASLGNLGNSF----IDLFD-IRNNGKKCLPDSITYATIIGGLCKV 542

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GR+  A K    +  K   PD +   T I+  CK+G++  A  +L +ME K C  S  T+
Sbjct: 543 GRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTY 602

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            +L++G    N+  ++  L+ +M  E+ +  ++   + ++  LS+  K ++ 
Sbjct: 603 NSLIQGLGSENQIFEIYGLMDEM-KERGIFPNVYTYNNIISCLSEGGKLKDA 653



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 237/484 (48%), Gaps = 35/484 (7%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFT--PNTVTF-NFLINGLCAEGRIMEAARLFKKLN 178
           L+  L  +G+   A     R LR  F   P  ++F N L      E R+     L+K + 
Sbjct: 87  LVRTLADLGLLENAISQF-RSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
           V    P   TFN LI+ LC       A ++F++M +E G  CKP+  +   ++ G C+ G
Sbjct: 146 VAKVKPQTYTFNLLISALCEMGYLENAREVFDKM-SEKG--CKPNEFSLGILVRGYCRAG 202

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
                 +LL +M+     PN + YN++I   C      EA+ L  +M + G+ PD+VTFN
Sbjct: 203 LHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFN 262

Query: 299 AMINYNCKDGKMDKVNRL---LELMIQRGV-NPDTVTYNSLMDGFCLVGRISRARELFVS 354
             I   CK G++ + +R+   +++  + G+  P+TVTYN +++GFC  G    AR +F S
Sbjct: 263 CRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDS 322

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M +      + SYNI +    +  K+ +A  +  EM  + I+P++ +YN L+ GL + G 
Sbjct: 323 MKNSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGM 381

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
             DA  ++  M+ + V PD+ T++T + G C+ G +LEA  V + +    C   + T N 
Sbjct: 382 FSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNI 441

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM---- 530
           L++ L K GR   A  L   +  +G   D VTC+TMI+ LCK G +DKA +++  M    
Sbjct: 442 LLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG 501

Query: 531 -------------------EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
                                K C+P  +T+ T++ G  +  +  +    L +M  +KL 
Sbjct: 502 SASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLS 561

Query: 572 VSDL 575
              L
Sbjct: 562 PDSL 565



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 154/528 (29%), Positives = 253/528 (47%), Gaps = 35/528 (6%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   FD M K   +  + S+ I +  L ++ +      +   +    + P+L+  N+L+
Sbjct: 315 EARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILV 373

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G+ S A  +LG +  S   P+TVT++ L++G C  G+I+EA  + +++    C 
Sbjct: 374 HGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCF 433

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+ T N L++ L +      A  L + M+NE G     D VT N++I+GLCK G +DKA
Sbjct: 434 PNMYTCNILLHSLWKEGRASEAEDLLQ-MMNERGYGL--DNVTCNTMINGLCKAGNLDKA 490

Query: 244 KELLLQMKDRNIN-----------------------PNVITYNSLICGFCCVDDWKEAKC 280
            E++  M  R                          P+ ITY ++I G C V    EAK 
Sbjct: 491 IEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKK 550

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
             +EM+   + PD + F+  I   CK GK+    R+L+ M ++G N    TYNSL+ G  
Sbjct: 551 KLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLG 610

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
              +I     L   M  +G   +VY+YN +I+   +  K++DA CL  EML + I P++ 
Sbjct: 611 SENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIY 670

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T+  L+   F+  + G A +L + + L+        ++   + L   G  L+A ++F+A 
Sbjct: 671 TFRILIGAFFKACDFGAAQELFE-IALSLCGHKESLYSFMFNELLAGGETLKAKELFEAA 729

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            +    L+   Y  LI  LCK G+L  A  + H++  K    D  +   +I  L K G  
Sbjct: 730 LDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSK 789

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTL----LRGFVQNNKKSKVVVLLHK 564
             A++    M     + SE  F       +RG + NN +S    ++H+
Sbjct: 790 HAADEFAERMME---MASETDFNEHENKNIRGRLNNNDESDWQKIVHR 834


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 249/487 (51%), Gaps = 18/487 (3%)

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC-FTPNTVTFNFLI 158
           V+S   RL S    P+      L+  LC     + A  +L R ++ C   P+ VT+  LI
Sbjct: 81  VMSHEPRLASR---PNAISYTTLMRALCADRRAAQAVGLL-RSMQDCGVRPDVVTYGTLI 136

Query: 159 NGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
            GLC    +  A  L  ++     +PNVV ++ L++G C+T       K+FEEM    G 
Sbjct: 137 RGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEM---SGR 193

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
             +PDVV Y ++ID LC+ G V KA  ++  M +R + PNV+TYN LI   C     +EA
Sbjct: 194 GIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREA 253

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ--RGVNPDTVTYNSLM 336
             L   M + GVQPDVVT+N +I       +MD+   LLE M+Q    V PD +T+NS++
Sbjct: 254 LDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVI 313

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            G C +G + +A ++   M   GCR ++ ++N+LI    +  KV+ A+ L  EM S  ++
Sbjct: 314 HGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQ 373

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P   TY+ L++G  ++  +  A   + +M+   + P+   +   +  +C  G + +A  +
Sbjct: 374 PDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDL 433

Query: 457 FQAI-RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           F  + RNCK  L    Y+ +I+G  K G  K A +    +  +G IPD VT S  I+   
Sbjct: 434 FNEMDRNCK--LDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFA 491

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           K G +  A  +L  M A   VP    F +L++G+       K++ L  +M A+     D+
Sbjct: 492 KSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAK-----DV 546

Query: 576 SLSSKVV 582
           +L  K++
Sbjct: 547 ALDPKII 553



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 238/467 (50%), Gaps = 50/467 (10%)

Query: 161 LCAEGRIMEAARLFKKLNVFACD---------PNV---VTFNTLINGLCRTRNTLVALKL 208
           L   GR   AARL + L +             P+V   V++NT++  LCR      AL L
Sbjct: 19  LLRRGRGEAAARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAALFL 78

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
              M +E     +P+ ++Y +++  LC D    +A  LL  M+D  + P+V+TY +LI G
Sbjct: 79  LRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRG 138

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C   D   A  L  EM ++G++P+VV ++ +++  CK G+ + V ++ E M  RG+ PD
Sbjct: 139 LCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPD 198

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            V Y +L+D  C  G++ +A  +   M  +G   +V +YN+LIN+ CK+  V +A+ L +
Sbjct: 199 VVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRK 258

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND--VVPDSFTFATYIDGLCK 446
            M  + ++P V+TYNTL++GL  V  + +A+ L+++M   +  V PD  TF + I GLCK
Sbjct: 259 NMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCK 318

Query: 447 NGFVLEAVQV--FQAIRNCKCEL-----------RIE----------------------T 471
            G++ +A+QV    A   C+C L           R+                       T
Sbjct: 319 IGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFT 378

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y+ LING CKM +++ A      ++H+G  P+ V    ++  +C +G M +A DL  +M+
Sbjct: 379 YSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD 438

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +NC      + T++ G  ++ +K      L  M  E L+   ++ S
Sbjct: 439 -RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYS 484



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 204/386 (52%), Gaps = 2/386 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + AV   + M +    P +  ++ LL    K  ++++V  +F+ ++  G+ PD+ +   L
Sbjct: 146 DTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTAL 205

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC+ G    A  V+  +      PN VT+N LIN +C EG + EA  L K ++    
Sbjct: 206 IDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGV 265

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VVT+NTLI GL        A+ L EEM+     + +PD++T+NS+I GLCK G++ +
Sbjct: 266 QPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRV-RPDLMTFNSVIHGLCKIGWMRQ 324

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++   M +     N++ +N LI G   V   K+A  L  EM  +G+QPD  T++ +IN
Sbjct: 325 ALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILIN 384

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK  ++++    L  M  +G+ P+ V Y  L+   C  G + +AR+LF  M  + C+ 
Sbjct: 385 GFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKL 443

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +Y+ +I+   K  + + A    ++M+ E + P  +TY+  ++   + G+L  A +++
Sbjct: 444 DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVL 503

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNG 448
            +M  +  VPD   F + I G    G
Sbjct: 504 KQMTASGFVPDVAVFDSLIQGYGAKG 529



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 4/244 (1%)

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSE-RI--RPSVITYNTLLSGLFQVGNLGDA 418
            D  SYN ++ A C+   ++ A+ L R M  E R+  RP+ I+Y TL+  L        A
Sbjct: 54  RDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQA 113

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           + L+  MQ   V PD  T+ T I GLC    V  AV++   +     E  +  Y+CL++G
Sbjct: 114 VGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHG 173

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK GR ++  K+F  +  +G  PDVV  + +I  LC+ G++ KA  ++  M  +   P+
Sbjct: 174 YCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPN 233

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            VT+  L+    +     + + L   M +EK V  D+   + ++  LS   +  E +   
Sbjct: 234 VVTYNVLINSMCKEGSVREALDLRKNM-SEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292

Query: 599 RHLL 602
             ++
Sbjct: 293 EEMM 296



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 6/200 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M      P   +++IL+    K +Q +   S    +   G+ P+      L+
Sbjct: 359 KAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLL 418

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             +C  G+   A  +   + R+C   +   ++ +I+G    G    A    K +      
Sbjct: 419 KAMCDQGMMGQARDLFNEMDRNCKL-DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLI 477

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT++  IN   ++ +   A ++ ++M    G +  PDV  ++S+I G    G  +K 
Sbjct: 478 PDAVTYSIPINMFAKSGDLAAAERVLKQMTAS-GFV--PDVAVFDSLIQGYGAKGDTEKI 534

Query: 244 KELLLQM--KDRNINPNVIT 261
            EL  +M  KD  ++P +I+
Sbjct: 535 LELTREMTAKDVALDPKIIS 554


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 147/489 (30%), Positives = 234/489 (47%), Gaps = 41/489 (8%)

Query: 37  SSHHFKDGT-SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           S  H+  GT S    L    KSG        Y  + M+     P   ++  LL  L + +
Sbjct: 9   SQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTY--NDMLAAGCVPNTYTYGYLLRSLCQAQ 66

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           +++   S+F+ + + G  P++F  ++LI  LC+      A  +L  ++     PN VT+ 
Sbjct: 67  RFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            L++GLC  G++ EA  LF ++    C P+ V +N LI+G  +  +   A +LFEEM+ +
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
               C P V TYNS++ G  + G   + + L   M  +   PN+ T+N+L+ GFC + D 
Sbjct: 187 G---CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            EA  LF+EM   G  PDVV++N +I   C  GK  +  RLL  MI+ GV PD V+YN L
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +DG+   G +  A +LF  +   G   D +SY+ +I+  C+  KV  A  ++++M++   
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA--- 360

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
                                           N   PD+      + GLC+   + E+ +
Sbjct: 361 --------------------------------NGSAPDAAVVIPLVIGLCRGERLTESCE 388

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +FQA+   +C   I  YN L+  LCK  R    C++FH L  +G  PDV     ++  L 
Sbjct: 389 LFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLR 448

Query: 516 KEGQMDKAN 524
           +    D A 
Sbjct: 449 RSDDKDAAE 457



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 228/449 (50%), Gaps = 6/449 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           +   T+++N+L+  L   GR       +  +    C PN  T+  L+  LC+ +    A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            +F  M  +    C P+V +Y+ +I GLC+   VD+A ELL +M D    PNV+TY SL+
Sbjct: 73  SVFRGMAAQG---CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C +   KEA  LF  M+  G  PD V +N +I+   K G M +  RL E M+++G  
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P   TYNSL+ GF   G   R + LF  M+ +GC  +++++N L++  CK   + +A  L
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + EM S    P V++YNTL+ G+   G   +A +L+ +M  + V PD  ++   IDG  K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           +G +  A+++F  I     E    +Y+ +I+ LC+ G++  A  +F  +   G  PD   
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              ++  LC+  ++ ++ +L   M    CVP    +  L+    +  +   V  + H++ 
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHEL- 428

Query: 567 AEKLVVSDLSLSSKVVDLL--SKDKKYRE 593
            E+    D+ +S  +++ L  S DK   E
Sbjct: 429 TERGFSPDVEISKVILETLRRSDDKDAAE 457


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 250/484 (51%), Gaps = 16/484 (3%)

Query: 50  FLND--RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL 107
           F+ND    ++  +  +E V  F         P   ++  L+    K +Q    V+L   +
Sbjct: 27  FVNDGCHREAYRVFKDELVTLF--------RPDDFTYGTLIRGFCKAEQIPQAVNLLGEM 78

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
            + G+ P +     LI  LC++  T  A  +  +++     P+   +  +I  LC   ++
Sbjct: 79  KAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKL 138

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
             AA  F+++    C P+ VT+  L++ L +        ++FEEM+++  +   P++VTY
Sbjct: 139 DLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS---PELVTY 195

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
            ++++G CK G +D+A  L+ ++K    +P+   Y++LI G C  D   EA+ LF EM  
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAA 254

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
             VQ DV+ + + I+  CK GK+D+   +   MI+ G  PD V+YN ++   C   R+S 
Sbjct: 255 GDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR-PSVITYNTLL 406
           A+EL    + + C   V    +L++  CK ++VE+A  +   ML    R PSV+TY+ ++
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVI 373

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL +   L DA  ++ KM+    VPD  T+   ID  CK G + EA ++FQ +    C 
Sbjct: 374 DGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCA 433

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           L +  YN LI G C+  ++  A  +   +  +G  P+VV+ ST++  LCKE ++++A  L
Sbjct: 434 LDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLL 493

Query: 527 LLDM 530
           +  M
Sbjct: 494 MEKM 497



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 232/498 (46%), Gaps = 37/498 (7%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G   + +  N L+      G    A+ V    L + F P+  T+  LI G C   +I +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L  ++      P +VTF +LI  LC    T  AL++F +M++      KPD   Y  +
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMID---MKVKPDAFLYTVV 128

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           I  LCK   +D A     +M      P+ +TY  L+        W++   +F EM+  G 
Sbjct: 129 IGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH 188

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P++VT+  ++N  CK G++D+   L+  +   G +P    Y++L+DG C   R   ARE
Sbjct: 189 SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARE 248

Query: 351 LF---------------------------------VSMVSKGCRHDVYSYNILINANCKD 377
           LF                                 V M+  GC  D  SYN++I + CKD
Sbjct: 249 LFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKD 308

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFT 436
            +V +A  L  + +  +  P V     L+ GL +   + +A  ++++M +  D  P   T
Sbjct: 309 NRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVT 368

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++  IDGLCK   + +A  V Q +R   C   + TY  +I+  CK+GRL  A +LF R+ 
Sbjct: 369 YSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMH 428

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +G   DVV  + +I   C+  ++D+A  ++ +M  +   P+ V+  T++ G  + ++  
Sbjct: 429 ERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVE 488

Query: 557 KVVVLLHKMAAEKLVVSD 574
           +  +L+ KM  E L  SD
Sbjct: 489 EARLLMEKMNFESLPDSD 506



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 204/404 (50%), Gaps = 32/404 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++A+  F  MI MK  P    +T+++  L K  + D   S F+R+  +G  PD     +
Sbjct: 103 TDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTV 162

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++ L K         +   +L    +P  VT+  ++NG C  GRI +A  L ++L    
Sbjct: 163 LVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTG 222

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-------------------------- 215
             P+   ++TLI+GLC+      A +LFE    +                          
Sbjct: 223 RSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAV 282

Query: 216 ----FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
                 A C PD V+YN II  LCKD  V +AKEL+ Q  +R   P V     L+ G C 
Sbjct: 283 HVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCK 342

Query: 272 VDDWKEAKCLFIEMMDNGVQ-PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
               +EA  +   M++ G + P VVT++A+I+  CK  ++D    +L+ M + G  PD V
Sbjct: 343 SRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVV 402

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TY +++D FC VGR+  ARELF  M  +GC  DV +YNILI   C+  KV++A+ +  EM
Sbjct: 403 TYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEM 462

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
               I+P+V++ +T++ GL +   + +A  L++KM     +PDS
Sbjct: 463 AGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFES-LPDS 505



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 214/441 (48%), Gaps = 7/441 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV     M     +P + +F  L+  L +    D  + +F ++    + PD F+  ++I
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LCK+     A     R+++S   P+ VT+  L++ L    +  +  ++F+++      
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS 189

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P +VT+ T++NG C+      AL L   +    G    P    Y+++IDGLCK    D+A
Sbjct: 190 PELVTYATVVNGYCKAGRIDQALSLMRRLK---GTGRSPSGSLYSTLIDGLCKHDRHDEA 246

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +E L +M   ++  +VI Y S I G C      EAK + ++M++ G  PD V++N +I  
Sbjct: 247 RE-LFEMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYS 304

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH- 362
            CKD ++ +   L++  ++R   P       L+DG C   R+  A  +   M+  G R  
Sbjct: 305 LCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAP 364

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V +Y+ +I+  CK  +++DA  + ++M      P V+TY  ++    +VG L +A +L 
Sbjct: 365 SVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELF 424

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M       D   +   I G C+   V EA+ + + +     +  + + + +++GLCK 
Sbjct: 425 QRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKE 484

Query: 483 GRLKTACKLFHRLQHKGPIPD 503
            R++ A  L  ++  +  +PD
Sbjct: 485 SRVEEARLLMEKMNFES-LPD 504



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 213/478 (44%), Gaps = 73/478 (15%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N  T N+L+           A ++F+   +E   + +PD  TY ++I G CK   + +A 
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVFK---DELVTLFRPDDFTYGTLIRGFCKAEQIPQAV 72

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            LL +MK   I P ++T+ SLI   C ++   +A  +F +M+D  V+PD   +  +I + 
Sbjct: 73  NLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHL 132

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK  K+D      E M+Q G  PD VTY  L+       +  +  ++F  M+SKG   ++
Sbjct: 133 CKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPEL 192

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPS-------------------------- 398
            +Y  ++N  CK  +++ A+ L R +      PS                          
Sbjct: 193 VTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEM 252

Query: 399 -------VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
                  VI Y + +SGL + G L +A  +  KM      PD  ++   I  LCK+  V 
Sbjct: 253 AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVS 312

Query: 452 EAVQVFQAIRNCKC---------------------------ELRIET---------YNCL 475
           EA ++       KC                           E  +ET         Y+ +
Sbjct: 313 EAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAV 372

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+GLCK  RL  A  +  +++  G +PDVVT + +I   CK G++D+A +L   M  + C
Sbjct: 373 IDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGC 432

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
               V +  L+RG+ +  K  + + ++ +MA   +  + +SLS+ +VD L K+ +  E
Sbjct: 433 ALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLST-IVDGLCKESRVEE 489



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 3/270 (1%)

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G   +T T NSL++ F   G    A  +F   +    R D ++Y  LI   CK +++  A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           V L  EM +  I P+++T+ +L+  L ++     AL++  +M    V PD+F +   I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LCK   +  A   F+ +    C     TY  L++ L K  + +   ++F  +  KG  P+
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +VT +T+++  CK G++D+A  L+  ++     PS   + TL+ G  ++++  +   L  
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             A +   V D+ + +  +  L K  K  E
Sbjct: 252 MAAGD---VQDVIVYTSFISGLCKAGKLDE 278


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 257/491 (52%), Gaps = 4/491 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M+     P + +F+ L+    K +   TV+ L + + S GL P+++   + I
Sbjct: 212 EALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICI 271

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L + G    A+ ++ R+      P+ VT+  LI+ LC   ++ +A  LF K+   +  
Sbjct: 272 RVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHK 331

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++      +     K++ EM  +  A   PDVVT+  +++ LCK G +++A
Sbjct: 332 PDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYA---PDVVTFTILVNALCKAGRINEA 388

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +LL  M+ + + PN+ TYN+LI G    +   +A  LF  M   GV+P   T+  +I+Y
Sbjct: 389 FDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDY 448

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           + K G   K     E M  RG+ P+ V  N+ +     +GR+  A+ +F  + S G   D
Sbjct: 449 HGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPD 508

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN+++    K  +V++A+ L  EM   +  P VI  N+L+  L++ G + +A ++  
Sbjct: 509 SVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFC 568

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+  ++ P   T+   + GL K G + +AVQ+F+++    C     T+N L++ LCK  
Sbjct: 569 RMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKND 628

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A K+F+++      PDV+T +T+IH   K+ Q+  A  L   M+ K   P  VT C
Sbjct: 629 EVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTLC 687

Query: 544 TLLRGFVQNNK 554
           TLL G +++ +
Sbjct: 688 TLLPGVIKSGQ 698



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 162/559 (28%), Positives = 267/559 (47%), Gaps = 41/559 (7%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
             EA   F+ +     +P   ++ +++   +K  Q D  + L   ++     PD+ V+N L
Sbjct: 491  GEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSL 550

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I+ L K G    A+ +  R+      P  VT+N L+ GL  EG+I +A +LF+ +N   C
Sbjct: 551  IDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGC 610

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             PN +TFNTL++ LC+     +ALK+F +M       C+PDV+T+N+II G  K   +  
Sbjct: 611  SPNTITFNTLLDCLCKNDEVDLALKMFYKMTT---MNCRPDVLTFNTIIHGFIKQNQIKN 667

Query: 243  AKELLLQMKDRNINPNVITYNSLICG----------FCCVDD-------------WK--- 276
            A  L  QMK + + P+ +T  +L+ G          F   +D             W+   
Sbjct: 668  AIWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVM 726

Query: 277  ---------EAKCLFIE-MMDNGVQPDVVTFNAMINYNCKDGKMDKV-NRLLELMIQRGV 325
                     E   LF E ++   +  D      +I   CK  K     N  ++   + GV
Sbjct: 727  GGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGV 786

Query: 326  NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             P    YN L+DGF  V  +  A  LF  M S GC  D ++YN LI+A+ K  K+ +   
Sbjct: 787  KPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFD 846

Query: 386  LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
            LY EML+   +P+ ITYN ++S L +   L  A+ L   +   D  P   TF   IDGL 
Sbjct: 847  LYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLL 906

Query: 446  KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
            K+G + +A ++F  + +  C      YN L+NG  K+G + TAC+ F R+  +G  PD+ 
Sbjct: 907  KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLK 966

Query: 506  TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            + + ++  LC  G++D A      ++     P  V +  ++ G  ++ +  + + L H+M
Sbjct: 967  SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026

Query: 566  AAEKLVVSDLSLSSKVVDL 584
                +V    + +S +++L
Sbjct: 1027 QNRGIVPDLYTYNSLILNL 1045



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 246/505 (48%), Gaps = 3/505 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +  + FD M +      + ++ I+   L          S  +++   G   + +  N L
Sbjct: 141 EDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGL 200

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L + G    A  V  R++     P+  TF+ L+        I     L +++     
Sbjct: 201 IHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGL 260

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+   I  L R      A ++ + M ++    C PDVVTY  +ID LC    +D 
Sbjct: 261 RPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG---CGPDVVTYTVLIDALCTARKLDD 317

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +MK  +  P+ +TY +L+  F       + + ++ EM  +G  PDVVTF  ++N
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVN 377

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++++   LL+ M ++GV P+  TYN+L+ G     R+  A +LF +M S G   
Sbjct: 378 ALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEP 437

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
             Y+Y +LI+ + K      A+  + +M +  I P+++  N  L  L ++G LG+A  + 
Sbjct: 438 TAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMF 497

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++++ + + PDS T+   +    K G V EA+++   +   +CE  +   N LI+ L K 
Sbjct: 498 NELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKA 557

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GR++ A ++F R++     P VVT + ++  L KEGQ+ KA  L   M    C P+ +TF
Sbjct: 558 GRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITF 617

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAA 567
            TLL    +N++    + + +KM  
Sbjct: 618 NTLLDCLCKNDEVDLALKMFYKMTT 642



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 266/554 (48%), Gaps = 39/554 (7%)

Query: 47   IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR 106
            I   ++  +K+G +   EA   F  M +M  +P + ++ ILL  L K  Q    V LF+ 
Sbjct: 547  INSLIDTLYKAGRV--EEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFES 604

Query: 107  LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
            +N +G  P+    N L++CLCK      A  +  ++      P+ +TFN +I+G   + +
Sbjct: 605  MNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQ 664

Query: 167  IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG--------- 217
            I  A  LF ++      P+ VT  TL+ G+ ++     A ++ E+   + G         
Sbjct: 665  IKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWE 723

Query: 218  -------------------------AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-K 251
                                     AICK D V    II  LCK      A+ + ++  K
Sbjct: 724  DVMGGILTEAGTEKAILFGERLVCRAICKDDSVLI-PIIKVLCKHKKTSVARNVFVKFTK 782

Query: 252  DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            +  + P +  YN LI GF  V + + A  LF EM   G  PD  T+N++I+ + K GK++
Sbjct: 783  ELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKIN 842

Query: 312  KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
            ++  L + M+ RG  P+T+TYN ++       R+ +A +L+ ++VS        ++  LI
Sbjct: 843  ELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLI 902

Query: 372  NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
            +   K  +++DA  ++  M+    RP+   YN L++G  ++G++  A +   +M    + 
Sbjct: 903  DGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIR 962

Query: 432  PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            PD  ++   +D LC  G V +A+  F+ ++    +  +  YN +INGL +  R + A  L
Sbjct: 963  PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSL 1022

Query: 492  FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            FH +Q++G +PD+ T +++I  L   G +++A  +  +++     P+  T+  L+RG+  
Sbjct: 1023 FHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTL 1082

Query: 552  NNKKSKVVVLLHKM 565
            +        +  KM
Sbjct: 1083 SGNSELAYGIYKKM 1096



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/574 (25%), Positives = 264/574 (45%), Gaps = 70/574 (12%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M      P   ++  LL   +     D V  ++  + ++G  PD+    +L
Sbjct: 316 DDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTIL 375

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G  + AF +L  + +    PN  T+N LI+GL    R+ +A  LF  +     
Sbjct: 376 VNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGV 435

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEM------------------VNEFGAICK--- 221
           +P   T+  LI+   ++ +   AL+ FE+M                  + E G + +   
Sbjct: 436 EPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKA 495

Query: 222 -----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                      PD VTYN ++    K G VD+A +LL +M      P+VI  NSLI    
Sbjct: 496 MFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLY 555

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                +EA  +F  M +  + P VVT+N ++    K+G++ K  +L E M   G +P+T+
Sbjct: 556 KAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTI 615

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           T+N+L+D  C    +  A ++F  M +  CR DV ++N +I+   K  ++++A+ L+ +M
Sbjct: 616 TFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKL-----------IDKMQLNDVVPDSFTFA- 438
             + +RP  +T  TLL G+ + G + DA ++           ID+    DV+    T A 
Sbjct: 676 -KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAG 734

Query: 439 ------------------------TYIDGLCKNGFVLEAVQVF-QAIRNCKCELRIETYN 473
                                     I  LCK+     A  VF +  +    +  ++ YN
Sbjct: 735 TEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYN 794

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI+G  ++  ++ A  LF  ++  G  PD  T +++I    K G++++  DL  +M  +
Sbjct: 795 LLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTR 854

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            C P+ +T+  ++   V++N+  K + L + + +
Sbjct: 855 GCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVS 888



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 215/483 (44%), Gaps = 41/483 (8%)

Query: 65   AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
            A+  F  M  M   P + +F  ++    K  Q    + LF ++    L PD   L  L+ 
Sbjct: 633  ALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLP 691

Query: 125  CLCKMGITSGAFV--------------------VLGRILRSCFTPNTVTFNF-------- 156
             + K G    AF                     V+G IL    T   + F          
Sbjct: 692  GVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAIC 751

Query: 157  --------LINGLCAEGRIMEAARLFKKLN-VFACDPNVVTFNTLINGLCRTRNTLVALK 207
                    +I  LC   +   A  +F K        P +  +N LI+G     N  VA  
Sbjct: 752  KDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWN 811

Query: 208  LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
            LFEEM +   A C PD  TYNS+ID   K G +++  +L  +M  R   PN ITYN +I 
Sbjct: 812  LFEEMKS---AGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVIS 868

Query: 268  GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                 +   +A  L+  ++     P   TF  +I+   K G++D  + + + M+  G  P
Sbjct: 869  NLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRP 928

Query: 328  DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
            ++  YN L++G+  +G +  A E F  MV +G R D+ SY IL++  C   +V+DA+  +
Sbjct: 929  NSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYF 988

Query: 388  REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             ++    + P ++ YN +++GL +     +AL L  +MQ   +VPD +T+ + I  L   
Sbjct: 989  EKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIV 1048

Query: 448  GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
            G + EA ++++ ++    +  + TYN LI G    G  + A  ++ ++   G  P+  T 
Sbjct: 1049 GMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108

Query: 508  STM 510
            + +
Sbjct: 1109 AQL 1111



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 181/374 (48%), Gaps = 4/374 (1%)

Query: 105  KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC-FTPNTVTFNFLINGLCA 163
            +RL    +  D  VL  +I  LCK   TS A  V  +  +     P    +N LI+G   
Sbjct: 743  ERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLE 802

Query: 164  EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
               +  A  LF+++    C P+  T+N+LI+   ++        L++EM+      CKP+
Sbjct: 803  VHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRG---CKPN 859

Query: 224  VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
             +TYN +I  L K   +DKA +L   +   + +P   T+  LI G        +A  +F 
Sbjct: 860  TITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFD 919

Query: 284  EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
             M+  G +P+   +N ++N   K G +D      + M++ G+ PD  +Y  L+D  C+ G
Sbjct: 920  GMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAG 979

Query: 344  RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            R+  A   F  +   G   D+ +YN++IN   + Q+ E+A+ L+ EM +  I P + TYN
Sbjct: 980  RVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYN 1039

Query: 404  TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            +L+  L  VG + +A K+ +++Q   + P+ FT+   I G   +G    A  +++ +   
Sbjct: 1040 SLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVG 1099

Query: 464  KCELRIETYNCLIN 477
             C+    T+  L N
Sbjct: 1100 GCDPNTGTFAQLPN 1113



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 193/420 (45%), Gaps = 46/420 (10%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI-----CGFCCVD 273
           I + +V TY  I   L   G + +A   L +M++     N  +YN LI      GFC   
Sbjct: 154 IIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFC--- 210

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
             KEA  ++  M+  G++P + TF+A++  + K   +  V  LLE M   G+ P+  TY 
Sbjct: 211 --KEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYT 268

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
             +      G+I  A  +   M   GC  DV +Y +LI+A C  +K++DA+CL+ +M S 
Sbjct: 269 ICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSS 328

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             +P  +TY TLL      G+L    K+  +M+ +   PD  TF   ++ LCK G + EA
Sbjct: 329 SHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEA 388

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF--------------------- 492
             +   +R       + TYN LI+GL +  RL  A  LF                     
Sbjct: 389 FDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDY 448

Query: 493 --------------HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
                          +++ +G  P++V C+  ++ L + G++ +A  +  ++++    P 
Sbjct: 449 HGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPD 508

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            VT+  +++ + +  +  + + LL +M+  +    D+ + + ++D L K  +  E    F
Sbjct: 509 SVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ-CEPDVIVINSLIDTLYKAGRVEEAWQMF 567



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 153/317 (48%), Gaps = 5/317 (1%)

Query: 289 GVQPDVV----TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           G  P+VV    T N M+       +++ +  + +LM ++ +  +  TY  +     + G 
Sbjct: 115 GELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGG 174

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           + +A      M   G   + YSYN LI+   +    ++A+ +YR M+SE ++PS+ T++ 
Sbjct: 175 LRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSA 234

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+    +  N+   + L+++M+   + P+ +T+   I  L ++G + EA ++ + + +  
Sbjct: 235 LMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG 294

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           C   + TY  LI+ LC   +L  A  LF +++     PD VT  T++      G +DK  
Sbjct: 295 CGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVE 354

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            +  +MEA    P  VTF  L+    +  + ++   LL  M  +  V+ +L   + ++  
Sbjct: 355 KIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG-VLPNLHTYNTLISG 413

Query: 585 LSKDKKYRECLNQFRHL 601
           L +  +  + L+ F ++
Sbjct: 414 LLRANRLDDALDLFSNM 430



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            ++A+++F+ + +    P + ++ +++  L ++++ +  +SLF  + + G+ PDL+  N L
Sbjct: 982  DDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSL 1041

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I  L  +G+   A  +   +      PN  T+N LI G    G    A  ++KK+ V  C
Sbjct: 1042 ILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGC 1101

Query: 183  DPNVVTFNTLIN 194
            DPN  TF  L N
Sbjct: 1102 DPNTGTFAQLPN 1113


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 150/501 (29%), Positives = 251/501 (50%), Gaps = 19/501 (3%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P   +F++L+   AK+   +  V  F ++   G  PD+F  N +++ + +  +   A 
Sbjct: 130 PPP---TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLAL 186

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            V  ++L+  + PN  TF  L+NGLC  G+  +A ++F ++      PN + +  +++GL
Sbjct: 187 AVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGL 246

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+ + T    +L   M     + C PD +T N+++DG CK G +D+A  LL   +     
Sbjct: 247 CQAKRTDDVHRLLNTMKV---SGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYV 303

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
             +  Y+SLI G      + E +    +M   G++PDVV +  +I   C+ G +D    +
Sbjct: 304 LGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNM 363

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L  M QRG++PDT  YN+L+ GFC VG + +AR L + +    C     +Y ILI   C+
Sbjct: 364 LNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCR 423

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN-------- 428
           +  +++A  ++ +M +    PS++T+N L+ GL + G L +A  L  KM++         
Sbjct: 424 NGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLR 483

Query: 429 -----DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
                D V D+ +  T ++ LC++G +L+A ++   + +      I TYN LING CK  
Sbjct: 484 LSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAK 543

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A KLF  LQ KG  PD VT  T+I    +  + + A  +L  M    C PS   + 
Sbjct: 544 NINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYK 603

Query: 544 TLLRGFVQNNKKSKVVVLLHK 564
            L+    +  K S    L  K
Sbjct: 604 CLMTWSCRKGKLSVAFSLWLK 624



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 250/556 (44%), Gaps = 54/556 (9%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N  +++A+  FD M +    P    +TI+L+ L + K+ D V  L   +  +G  PD   
Sbjct: 214 NGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSIT 273

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            N L++  CK+G    AF +L    +  +      ++ LI+GL    R  E     +K+ 
Sbjct: 274 CNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMF 333

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +P+VV +  LI G C       AL +  +M         PD   YN++I G C  G
Sbjct: 334 KAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG---LSPDTYCYNALIKGFCDVG 390

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +DKA+ L L++   +  P   TY  LICG C      EA+ +F +M + G  P ++TFN
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNP--------------DTVTYNSLMDGFCLVGR 344
           A+I+  CK G++++   L   M + G NP              DT +  ++++  C  G 
Sbjct: 451 ALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGL 509

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           I +A +L + +   G   D+ +YN+LIN  CK + +  A  L+RE+  +   P  +TY T
Sbjct: 510 ILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGT 569

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV-------------- 450
           L+ G  +V    DA +++D+M  N   P S  +   +   C+ G +              
Sbjct: 570 LIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSL 629

Query: 451 --------------LEAVQVFQAIRNCKCEL-------RIETYNCLINGLCKMGRLKTAC 489
                          E  ++ +A+R C  E+        I  Y   + GLC+  R + A 
Sbjct: 630 PSQEDETLKLAEEHFEKGELEKAVR-CLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEAL 688

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           K+F  L+      +  +C  +I+ LCK+G ++ A D+ L    K  +        LLR  
Sbjct: 689 KIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSL 748

Query: 550 VQNNKKSKVVVLLHKM 565
           +  +K    + LL++M
Sbjct: 749 ILQDKMKHALDLLNRM 764



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 214/443 (48%), Gaps = 16/443 (3%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           NL+I+ L K       + +L  +  S       TF+ LI      G   +A   F K+  
Sbjct: 100 NLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKD 159

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
           F C P+V T+N++++ + +    L+AL ++ +M+        P+  T+  +++GLCK+G 
Sbjct: 160 FGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLK---LNYNPNRATFVILLNGLCKNGK 216

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
            D A ++  +M  + I PN + Y  ++ G C      +   L   M  +G  PD +T NA
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +++  CK G++D+   LL+L  + G       Y+SL+DG     R    +E    M   G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              DV  Y ILI   C+   V+ A+ +  +M    + P    YN L+ G   VG L  A 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L  ++  ND  P S T+   I G+C+NG + EA Q+F  + N  C   I T+N LI+GL
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456

Query: 480 CKMGRLKTACKLFHRLQ-HKGP------------IPDVVTCSTMIHWLCKEGQMDKANDL 526
           CK G L+ A  LF++++  K P            + D  +  TM+  LC+ G + KA  L
Sbjct: 457 CKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKL 516

Query: 527 LLDMEAKNCVPSEVTFCTLLRGF 549
           L+ +     VP  +T+  L+ GF
Sbjct: 517 LMQLADSGVVPDIMTYNVLINGF 539



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 236/523 (45%), Gaps = 48/523 (9%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG   + +AV  F  M      P + ++  +L ++ + + +   ++++ ++      P+
Sbjct: 143 KSG--MAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPN 200

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                +L+N LCK G T  A  +   + +    PNT+ +  +++GLC   R  +  RL  
Sbjct: 201 RATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLN 260

Query: 176 KLNVFACDPNVVTFNTLINGLCR---TRNTLVALKLFE---------------------- 210
            + V  C P+ +T N L++G C+          L+LFE                      
Sbjct: 261 TMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAK 320

Query: 211 --EMVNE-----FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
             + V E     F A  +PDVV Y  +I G C+ G VD A  +L  M  R ++P+   YN
Sbjct: 321 RYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYN 380

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI GFC V    +A+ L +E+  N   P   T+  +I   C++G +D+  ++   M   
Sbjct: 381 ALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENL 440

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSM-----------VSKGCRH--DVYSYNIL 370
           G +P  +T+N+L+DG C  G +  AR LF  M           +S+G     D  S   +
Sbjct: 441 GCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTM 500

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +   C+   +  A  L  ++    + P ++TYN L++G  +  N+  A KL  ++QL   
Sbjct: 501 VERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGH 560

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PDS T+ T IDG  +     +A +V   +    C      Y CL+   C+ G+L  A  
Sbjct: 561 SPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFS 620

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
           L+ +     P  +  T         ++G+++KA   LL+M  K
Sbjct: 621 LWLKYLRSLPSQEDETLKLAEEHF-EKGELEKAVRCLLEMNFK 662



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 173/383 (45%), Gaps = 3/383 (0%)

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           VT N +I+ L +        K+ EE+ N    I  P   T++ +I    K G  +KA E 
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPP---TFSVLIAAYAKSGMAEKAVES 153

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
             +MKD    P+V TYNS++      + +  A  ++ +M+     P+  TF  ++N  CK
Sbjct: 154 FGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCK 213

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +GK D   ++ + M Q+G+ P+T+ Y  ++ G C   R      L  +M   GC  D  +
Sbjct: 214 NGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSIT 273

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
            N L++  CK  ++++A  L +    E     +  Y++L+ GLF+     +  +   KM 
Sbjct: 274 CNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMF 333

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              + PD   +   I G C+ G V  A+ +   +           YN LI G C +G L 
Sbjct: 334 KAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLD 393

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A  L   +      P   T + +I  +C+ G +D+A  +   ME   C PS +TF  L+
Sbjct: 394 KARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALI 453

Query: 547 RGFVQNNKKSKVVVLLHKMAAEK 569
            G  +  +  +   L +KM   K
Sbjct: 454 DGLCKAGELEEARHLFYKMEIGK 476



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 5/256 (1%)

Query: 342 VGRISRAREL----FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           V R  R  EL    F+    +       ++N++I+   KD   +    +  E+ +  I+ 
Sbjct: 70  VMREQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQI 129

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
              T++ L++   + G    A++   KM+     PD FT+ + +  + +    L A+ V+
Sbjct: 130 PPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVY 189

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             +          T+  L+NGLCK G+   A K+F  +  KG  P+ +  + ++  LC+ 
Sbjct: 190 NQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQA 249

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
            + D  + LL  M+   C P  +T   LL GF +  +  +   LL     E  V+     
Sbjct: 250 KRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGY 309

Query: 578 SSKVVDLLSKDKKYRE 593
           SS ++D L + K+Y E
Sbjct: 310 SS-LIDGLFRAKRYDE 324


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 149/496 (30%), Positives = 243/496 (48%), Gaps = 4/496 (0%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D MI++   P   + + L+  L +  +      L  R+   G  P LFV N LIN LCK 
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G    A ++   +       N VT++ LI+  C  G++  A     K+ +      V  +
Sbjct: 380 GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPY 439

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N+LING C+  N   A+  F+EM+++     KP VV+Y S+I G C  G + +A  L  +
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKG---LKPTVVSYTSLISGYCNKGKLHEAFRLYHE 496

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  + I PN  T+ +LI      +   +A  LF EM++  + P+ VT+N MI  +CK+G 
Sbjct: 497 MTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
             K   LL  M+Q+G+ PDT TY  L+   C  GR+  A++    +  +  + +   Y+ 
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSA 616

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L++  CK+ ++ DA+ + REM+   +   ++ Y  L+ G  +  +      L+  M    
Sbjct: 617 LLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR 676

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + PD   + + IDG  K G V +A  ++  + +  C   I TY  LIN LCK G +  A 
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            L+  +      P+ VT    +  L +EG M+KA  L  DM  K  + + V++  L+RGF
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGF 795

Query: 550 VQNNKKSKVVVLLHKM 565
            +  +  +   LL +M
Sbjct: 796 CKLGRVEEATKLLDEM 811



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 265/524 (50%), Gaps = 6/524 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           ++V  F  M + +  P + +   +L  LAK ++ D V+ LF  + S G+ PD+++   +I
Sbjct: 176 DSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVI 235

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C++   + A  ++ R+  S    N V +N LI+GLC   R+ EA  +   L      
Sbjct: 236 RSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLT 293

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            + VT+ TL+ GLC+ +   V   + +EM+ E G +  P     +S+++GL + G V  A
Sbjct: 294 ASEVTYCTLVLGLCKVQEFEVGAGVMDEMI-ELGFV--PTEAALSSLVEGLRRKGKVVDA 350

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L+ ++K     P++  YN+LI   C    + EA+ LF EM + G+  + VT++ +I+ 
Sbjct: 351 FDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDS 410

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ GK+D     L  MI  G+      YNSL++G C +G +S A   F  M+ KG +  
Sbjct: 411 FCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPT 470

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V SY  LI+  C   K+ +A  LY EM  + I P+  T+ TL+S LF+   + DA +L D
Sbjct: 471 VVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFD 530

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M   +++P+  T+   I+G CK G  ++A ++   +          TY  LI+ LC  G
Sbjct: 531 EMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTG 590

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+  A K    L  +    + +  S ++H  CKEG++  A  +  +M  +      V + 
Sbjct: 591 RVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYA 650

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            L+ G ++    S V  LL  M  ++L   D  + + ++D  SK
Sbjct: 651 VLIDGTIKEQDTSAVFGLLKNMHDQRL-RPDKVIYTSMIDGYSK 693



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 153/505 (30%), Positives = 248/505 (49%), Gaps = 9/505 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV   + +I+   +    ++  L+  L K ++++    +   +   G  P    L+ L+
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L + G    AF ++ R+ +    P+   +N LIN LC +G+  EA  LFK++      
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            N VT++ LI+  CR      A+    +M+    A  K  V  YNS+I+G CK G +  A
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIM---AGIKITVYPYNSLINGHCKLGNLSAA 455

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
                +M D+ + P V++Y SLI G+C      EA  L+ EM   G+ P+  TF  +I+ 
Sbjct: 456 VSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISA 515

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             +  +M    RL + M+++ + P+ VTYN +++G C  G   +A EL   MV KG   D
Sbjct: 516 LFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPD 575

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            Y+Y  LI++ C   +V +A     ++  E  + + + Y+ LL G  + G L DAL +  
Sbjct: 576 TYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCR 635

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE-LRIE--TYNCLINGLC 480
           +M    V  D   +A  IDG  K     +   VF  ++N   + LR +   Y  +I+G  
Sbjct: 636 EMVKRGVDMDLVCYAVLIDGTIKEQ---DTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYS 692

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G +K A  ++  +  +G  P++VT +T+I+ LCK G MDKA  L  +M   N  P+ V
Sbjct: 693 KAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHV 752

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
           T+C  L    +     K V L + M
Sbjct: 753 TYCCFLDHLAREGSMEKAVQLHNDM 777



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 238/486 (48%), Gaps = 4/486 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A++F   MI       +  +  L+    K       VS F  +   GL P +     L
Sbjct: 418 DTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSL 477

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C  G    AF +   +      PNT TF  LI+ L    R+ +A RLF ++     
Sbjct: 478 ISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNM 537

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VT+N +I G C+  NT+ A +L  +MV + G +  PD  TY  +I  LC  G V +
Sbjct: 538 MPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQK-GLV--PDTYTYRPLISSLCSTGRVCE 594

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK+ +  +   +   N + Y++L+ G+C     ++A  +  EM+  GV  D+V +  +I+
Sbjct: 595 AKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLID 654

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+     V  LL+ M  + + PD V Y S++DG+   G + +A  ++  M+ +GC  
Sbjct: 655 GTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTP 714

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++ +Y  LIN  CK   ++ A  L++EML     P+ +TY   L  L + G++  A++L 
Sbjct: 715 NIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLH 774

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M L  ++ ++ ++   + G CK G V EA ++   + +        TY+ +I   C+ 
Sbjct: 775 NDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRR 833

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G L  A + +  + +KG  PD +  + +I+  C  G++ KA +L  DM  +   P++ T 
Sbjct: 834 GNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATH 893

Query: 543 CTLLRG 548
            +L  G
Sbjct: 894 KSLSHG 899



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 239/525 (45%), Gaps = 58/525 (11%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG-ITSGAF----- 136
           SF IL+  L     +    SL + L   G      V   L++C  K   I+S  F     
Sbjct: 107 SFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEKCDFISSLGFDLLIQ 166

Query: 137 -----------VVLGRILRSC-FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
                      V++ R++R C   P   T   ++NGL    R+     LF ++      P
Sbjct: 167 SYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRP 226

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           ++  +  +I   C  +N   A ++ + M +        +VV YN +I GLCK+  V +A 
Sbjct: 227 DIYIYVAVIRSFCELKNFAKAKEMIQRMESS-----DLNVVVYNVLIHGLCKNKRVWEAV 281

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD----------------- 287
           E+   +  + +  + +TY +L+ G C V +++    +  EM++                 
Sbjct: 282 EIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGL 341

Query: 288 ------------------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
                              G  P +  +NA+IN  CKDGK D+   L + M ++G+  + 
Sbjct: 342 RRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAND 401

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTY+ L+D FC  G++  A      M+  G +  VY YN LIN +CK   +  AV  + E
Sbjct: 402 VTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDE 461

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M+ + ++P+V++Y +L+SG    G L +A +L  +M    + P+++TF T I  L +   
Sbjct: 462 MIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANR 521

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A ++F  +          TYN +I G CK G    A +L +++  KG +PD  T   
Sbjct: 522 MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRP 581

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +I  LC  G++ +A   + D+  ++   +E+ +  LL G+ +  +
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGR 626



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 225/463 (48%), Gaps = 6/463 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K GN+++  AV FFD MI     P + S+T L++      +      L+  +  
Sbjct: 442 LINGHCKLGNLSA--AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ P+ +    LI+ L +    + AF +   +L     PN VT+N +I G C EG  ++
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK 559

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  L  ++      P+  T+  LI+ LC T     A K  +++  E     K + + Y++
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH---FKLNEMCYSA 616

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ++ G CK+G +  A  +  +M  R ++ +++ Y  LI G     D      L   M D  
Sbjct: 617 LLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR 676

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++PD V + +MI+   K G + K   + ++MI  G  P+ VTY +L++  C  G + +A 
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            L+  M+      +  +Y   ++   ++  +E AV L+ +ML + +  + ++YN L+ G 
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGF 795

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            ++G + +A KL+D+M  N + PD  T++T I   C+ G +  A++ +  + N   +   
Sbjct: 796 CKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDT 855

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
             YN LI G C  G L  A +L   +  +G  P+  T  ++ H
Sbjct: 856 LAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSH 898



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 50/116 (43%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+ IL+    K  + +    L   +  N +FPD    + +I   C+ G   GA      +
Sbjct: 787 SYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTM 846

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L     P+T+ +NFLI G C  G + +A  L   +      PN  T  +L +G  R
Sbjct: 847 LNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASR 902


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 262/525 (49%), Gaps = 3/525 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F   M+K K  P + +F IL+ +L     +     L +++  +G  P +   N +++  C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    A  +L  +       +  T+N LI+ LC   R  +   L + +      PN V
Sbjct: 240 KKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEV 299

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+NTL+NG       L+A +L  EM+  FG    P+ VT+N++IDG   +G   +A ++ 
Sbjct: 300 TYNTLLNGFSNEGKVLIARQLLNEMLT-FG--LSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M+ + +    ++Y  L+ G C   ++  A+  ++ M  NGV    +T+  MI+  CK+
Sbjct: 357 HMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D+   +L  M + G++PD VTY++L++GFC VGR+  A+E+   +   G   +   Y
Sbjct: 417 GFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIY 476

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           + LI   C+   +++ + +Y  M+ E   P   T+N L++ L + G + +A + +  M  
Sbjct: 477 STLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + ++P++ +F   I+G   +G  L+A  VF  +          TY  L+ GLCK G L  
Sbjct: 537 DGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIA 596

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A K    LQ+     D V C+T+I  +CK G +DKA  L  +M  ++ +P   T+ +L+ 
Sbjct: 597 AEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLIS 656

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           G  +  K    ++   +  A   +V +  + +  VD + K  +++
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWK 701



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 256/492 (52%), Gaps = 4/492 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           ++ Y    M K   +P + ++  +L    K  ++   + L   +N  G+  D+   N+LI
Sbjct: 211 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLI 270

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC+   ++  +++L  + +    PN VT+N L+NG   EG+++ A +L  ++  F   
Sbjct: 271 HDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLS 330

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VTFN LI+G     N   ALK+F  M+   G I     V+Y  ++DGLCK+   D A
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMF-HMMEAKGLIGTE--VSYGVLLDGLCKNAEFDLA 387

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +   ++MK   +    ITY  +I G C      EA  +  EM  +G+ PD+VT++A+IN 
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALING 447

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G++     ++  + + G++P+ + Y++L+   C +G +     ++ +M+ +G   D
Sbjct: 448 FCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPD 507

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            +++N+L+ + CK  KV +A    R M S+ I P+ ++++ L++G    G    A  + D
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFD 567

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M      P  FT+ + + GLCK G ++ A +  ++++N    +     N LI  +CK G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSG 627

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK-NCVPSEVTF 542
            L  A  LF  +  +  +PD  T +++I  LC++G+   A     + EA+ N VP++V +
Sbjct: 628 NLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMY 687

Query: 543 CTLLRGFVQNNK 554
              + G  +  +
Sbjct: 688 TCFVDGMFKAGQ 699



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 229/448 (51%), Gaps = 4/448 (0%)

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G +S  F  L    R C   N   F+ LI     EG I ++  +F+ + ++  +P+V T 
Sbjct: 103 GKSSFVFGALMATYRLC-NSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N ++  + ++   +      +EM+     IC PDV T+N +I+ LC +G   K+  L+ +
Sbjct: 162 NAILGSIVKSCEDVSVWSFLKEMLKR--KIC-PDVATFNILINVLCAEGSFKKSSYLMQK 218

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+     P ++TYN+++  +C    +K A  L   M   GV  DV T+N +I+  C+  +
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNR 278

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
             K   LL  M +R ++P+ VTYN+L++GF   G++  AR+L   M++ G   +  ++N 
Sbjct: 279 SAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNA 338

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+ +  +   ++A+ ++  M ++ +  + ++Y  LL GL +      A     +M+ N 
Sbjct: 339 LIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           V     T+   IDGLCKNGF+ EAV +   +     +  I TY+ LING C++GRLKTA 
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAK 458

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++  R+   G  P+ +  ST+I+  C+ G + +   +   M  +   P   TF  L+   
Sbjct: 459 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSL 518

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
            +  K ++    +  M ++ ++ + +S 
Sbjct: 519 CKAGKVAEAEEFMRCMTSDGILPNAVSF 546



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 243/541 (44%), Gaps = 5/541 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV   + M K    P + +++ L+    +  +  T   +  R+   GL P+  + + L
Sbjct: 420 DEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+MG       +   ++    TP+  TFN L+  LC  G++ EA    + +     
Sbjct: 480 IYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN V+F+ LING   +   L A  +F+EM  + G    P   TY S++ GLCK G +  
Sbjct: 540 LPNAVSFDCLINGYGSSGEGLKAFSVFDEMT-KVGH--HPTFFTYGSLLKGLCKGGHLIA 596

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++ L  +++     + +  N+LI   C   +  +A  LF EM+   + PD  T+ ++I+
Sbjct: 597 AEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLIS 656

Query: 303 YNCKDGKMDKVNRLLELMIQRG-VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
             C+ GK        +    RG + P+ V Y   +DG    G+          M   G  
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLT 716

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            DV + N +I+   +  K+E    L  EM ++   P++ TYN LL G  +  ++  +  L
Sbjct: 717 RDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFML 776

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
              M L+ ++PD  T  + I G+C++  +   +++ +A      E+   T+N LI+  C 
Sbjct: 777 YRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCA 836

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G +  A  + + +   G   D  TC  ++  L +  +  ++  +L +M  +   P    
Sbjct: 837 NGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRK 896

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +  LL G  +        V+  +M A K+   +++  S +V  L+K  K  E     R +
Sbjct: 897 YIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVA-ESAMVRALAKCGKADEASLLLRSM 955

Query: 602 L 602
           L
Sbjct: 956 L 956



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 223/500 (44%), Gaps = 6/500 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E +  ++ MI    +P   +F +L+T L K  +        + + S+G+ P+    + LI
Sbjct: 491 ETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLI 550

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N     G    AF V   + +    P   T+  L+ GLC  G ++ A +  K L      
Sbjct: 551 NGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAA 610

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            + V  NTLI  +C++ N   A+ LF EMV        PD  TY S+I GLC+ G    A
Sbjct: 611 VDTVMCNTLITAMCKSGNLDKAVSLFGEMVQR---SILPDSFTYTSLISGLCRKGKTVIA 667

Query: 244 KELLLQMKDR-NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMI 301
                + + R N+ PN + Y   + G      WK A   F + MD  G+  DVVT NAMI
Sbjct: 668 ILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWK-AGFYFRQQMDKLGLTRDVVTTNAMI 726

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   + GK++K + LL  M  +   P+  TYN L+ G+     +S +  L+ SM+  G  
Sbjct: 727 DGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGIL 786

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +   +I   C+   +E  + + +  +   +     T+N L+S     G +  A  +
Sbjct: 787 PDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDM 846

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ++ M    +  D  T    +  L +N    E+  V   +           Y  L+NGLC+
Sbjct: 847 VNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCR 906

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
           +G +KTA  +   +      P  V  S M+  L K G+ D+A+ LL  M     VP+  +
Sbjct: 907 VGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIAS 966

Query: 542 FCTLLRGFVQNNKKSKVVVL 561
           F TL+  F +N   ++ + L
Sbjct: 967 FTTLMHLFCKNGNVTEALEL 986



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 235/512 (45%), Gaps = 40/512 (7%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            +A   FD M K+   P   ++  LL  L K           K L +     D  + N LI
Sbjct: 561  KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLI 620

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-C 182
              +CK G    A  + G +++    P++ T+  LI+GLC +G+ + A    K+       
Sbjct: 621  TAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNL 680

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             PN V +   ++G+ +          F + +++ G     DVVT N++IDG  + G ++K
Sbjct: 681  VPNKVMYTCFVDGMFKAGQWKAGF-YFRQQMDKLG--LTRDVVTTNAMIDGYSRMGKIEK 737

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              +LL +M ++N  PN+ TYN L+ G+        +  L+  M+ +G+ PD +T  ++I 
Sbjct: 738  THDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIIL 797

Query: 303  YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              C+   ++   ++L+  I RGV  D  T+N L+   C  G I+ A ++   M S G   
Sbjct: 798  GICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISL 857

Query: 363  DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            D  + + +++   ++ + +++  +  EM  + I P    Y  LL+GL +VG++  A  + 
Sbjct: 858  DKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVK 917

Query: 423  DKMQLNDV-----------------------------------VPDSFTFATYIDGLCKN 447
            ++M  + +                                   VP   +F T +   CKN
Sbjct: 918  EEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKN 977

Query: 448  GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
            G V EA+++   + NC  +L + +YN LI GLC  G +  A +LF  ++  G + +V T 
Sbjct: 978  GNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTY 1037

Query: 508  STMIHWLCKEGQMDKANDLLL-DMEAKNCVPS 538
              ++  +  +G      D++L D+ A+  + +
Sbjct: 1038 KALVGGILSQGTEFSGTDIILKDLLARGFITA 1069



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 62/133 (46%)

Query: 62   SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            ++EA      M+KMK  P + SFT L+ +  KN      + L   +++ GL  DL   N+
Sbjct: 945  ADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNV 1004

Query: 122  LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            LI  LC  G  + AF +   + R  F  N  T+  L+ G+ ++G       +  K  +  
Sbjct: 1005 LITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLAR 1064

Query: 182  CDPNVVTFNTLIN 194
                 ++FN +IN
Sbjct: 1065 GFITAMSFNHMIN 1077


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 251/492 (51%), Gaps = 3/492 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +  I++  L K+ + D V      +   G++ DL   N L+N  C+ G+ S AF ++  +
Sbjct: 226 TLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCM 285

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P   T+N LINGLC EG    A R+  ++      PN  TFN ++   CR  + 
Sbjct: 286 AGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDV 345

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A ++F EM+   G +  PD+++++SI+    ++G + +A     +MK   + P+ + Y
Sbjct: 346 WEAERVFNEMLQR-GVV--PDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIY 402

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             LI G+C  DD   A  +  EM++ G   DVVT+N ++N  C+   +D  + L + M++
Sbjct: 403 TILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVE 462

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RGV PD  T  +L+ G+C  G +++A  LF +M  +  + DV +YN L++  CK  ++E 
Sbjct: 463 RGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEK 522

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+ +M+S  I PS I+++ L++G   +G + +A +L D+M+   + P   T  T I 
Sbjct: 523 AKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIK 582

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G  + G + +A      + +        TYN LIN   K      A  L + ++ +G +P
Sbjct: 583 GYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLP 642

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           ++VT + ++    + G+M +A  +L  M  K   P + T+ +L+ G+V  +   +   + 
Sbjct: 643 NLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVH 702

Query: 563 HKMAAEKLVVSD 574
            +M     V  D
Sbjct: 703 DEMLQRGFVPDD 714



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 266/540 (49%), Gaps = 38/540 (7%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+    + ++       F+ L   G    +   N L+  + K+G    A+ V    +
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           +S    N  T N ++N LC +G++        ++       ++VT+NTL+N  CR     
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  L + M    G   KP + TYN++I+GLCK+G  ++AK +L +M    + PN  T+N
Sbjct: 277 EAFGLVDCMA---GKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM------------- 310
            ++   C  +D  EA+ +F EM+  GV PD+++F++++    ++G++             
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 311 -------------------DKVNRLLEL---MIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
                              D V+  L++   M++RG   D VTYN+L++G C    +  A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            ELF  MV +G   D Y+   LI+  CKD  +  A+ L+  M    ++P V+TYNTL+ G
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             +VG +  A +L   M   ++ P   +F+  I+G C  G V EA +++  ++    +  
Sbjct: 514 FCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPT 573

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + T N +I G  + G L  A    + +  +G  PD +T +T+I+   KE   D+A  L+ 
Sbjct: 574 LVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLIN 633

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +ME +  +P+ VT+  +L GF ++ +  +  ++LHKM  + +     + +S +   +SKD
Sbjct: 634 NMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKD 693



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 200/370 (54%), Gaps = 3/370 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F+ M++    P + SF+ ++ + ++N +    ++ F+++   GL PD  +  +LI
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 406

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  C+    SGA  +   ++      + VT+N L+NGLC    + +A  LFK++      
Sbjct: 407 NGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF 466

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+  T  TLI+G C+  N   AL LFE M        KPDVVTYN+++DG CK G ++KA
Sbjct: 467 PDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS---LKPDVVTYNTLMDGFCKVGEMEKA 523

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           KEL   M  R I P+ I+++ LI GFC +    EA  L+ EM + G++P +VT N +I  
Sbjct: 524 KELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 583

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             + G + K N  L  MI  GV PD +TYN+L++ F       RA  L  +M  +G   +
Sbjct: 584 YLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPN 643

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +YN ++    +  ++++A  +  +M+ + I P   TY +L++G     N+ +A ++ D
Sbjct: 644 LVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHD 703

Query: 424 KMQLNDVVPD 433
           +M     VPD
Sbjct: 704 EMLQRGFVPD 713



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 203/388 (52%), Gaps = 3/388 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
            D M+ +   P   +F  +L    + +       +F  +   G+ PDL   + ++    +
Sbjct: 317 LDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSR 376

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A     ++      P+TV +  LING C    +  A ++  ++    C  +VVT
Sbjct: 377 NGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVT 436

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +NTL+NGLCR +    A +LF+EMV E G    PD  T  ++I G CKDG + KA  L  
Sbjct: 437 YNTLLNGLCRGKMLDDADELFKEMV-ERGVF--PDFYTLTTLIHGYCKDGNMTKALSLFE 493

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M  R++ P+V+TYN+L+ GFC V + ++AK L+ +M+   + P  ++F+ +IN  C  G
Sbjct: 494 TMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLG 553

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            + +  RL + M ++G+ P  VT N+++ G+   G +S+A +   +M+S+G   D  +YN
Sbjct: 554 LVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYN 613

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LIN+  K++  + A  L   M    + P+++TYN +L G  + G + +A  ++ KM   
Sbjct: 614 TLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDK 673

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQV 456
            + PD  T+ + I+G      + EA +V
Sbjct: 674 GINPDKSTYTSLINGYVSKDNMKEAFRV 701


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 273/532 (51%), Gaps = 37/532 (6%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            PG+ S+  LL    + KQ+  V SLF    + G+ P+L   N+LI   CK      A  
Sbjct: 111 EPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            L  + +  F P+  +++ +IN L   G++ +A  LF +++     P+V  +N LI+G  
Sbjct: 171 FLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFL 230

Query: 198 RTRNTLVALKLFEEMVNE-------------FGAICK--------------------PDV 224
           + ++  +A++L+++++ +                + K                     D+
Sbjct: 231 KEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDL 290

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
            TY+S+I GLC +G VDKA+ +  ++ +R    +V+TYN+++ GFC     KE+  L+  
Sbjct: 291 YTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW-R 349

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           +M+     ++V++N +I    ++GK+D+   +  LM  +G   D  TY   + G C+ G 
Sbjct: 350 IMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGY 409

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +++A  +   + SKG   DVY+Y  +I+  CK +++E+A  L +EM    +  +    N 
Sbjct: 410 VNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNA 469

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ GL +   L DA  L+  M  N  +P   ++   I GLC+ G   EA    + +    
Sbjct: 470 LIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENG 529

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +  ++TY+ L+ GLC+  +++ A +L+H+    G  PDV+  + +IH LC  G++D A 
Sbjct: 530 LKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAM 589

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQ---NNKKSKVVVLLHKMAAEKLVVS 573
            ++ +ME +NC  + VT+ TL+ G+ +   +N+ + +   ++KM  +  ++S
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIIS 641



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 227/455 (49%), Gaps = 6/455 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P   ++N L+N      + ++   LF         PN+ T+N LI   C+ +    A   
Sbjct: 112 PGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
              M  E     KPDV +Y+++I+ L K G +D A EL  +M +R + P+V  YN LI G
Sbjct: 172 LNWMWKEG---FKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDG 228

Query: 269 FCCVDDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           F    D K A  L+ +++ D+ V P+V T N MI+   K G++D   ++ + M Q     
Sbjct: 229 FLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREK 288

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  TY+SL+ G C  G + +A  +F  +V +    DV +YN ++   C+  K+++++ L+
Sbjct: 289 DLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW 348

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           R ++ +R   ++++YN L+ GL + G + +A  +   M       D+ T+  +I GLC N
Sbjct: 349 R-IMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVN 407

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G+V +A+ V Q + +    L +  Y  +I+ LCK  RL+ A  L   +   G   +   C
Sbjct: 408 GYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVC 467

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + +I  L ++ ++  A+ L+  M    C+P+ V++  L+ G  +  K  +    + +M  
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEM-L 526

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           E  +  DL   S ++  L +D+K    L  +   L
Sbjct: 527 ENGLKPDLKTYSILLGGLCRDRKIELALELWHQFL 561



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 248/509 (48%), Gaps = 7/509 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  +ND  K+G +  ++A+  FD M + + +P +T + IL+    K K +   + 
Sbjct: 183 DVFSYSTVINDLAKTGKL--DDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQ 240

Query: 103 LF-KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           L+ K L  + ++P++   N++I+ L K G       +  R+ ++    +  T++ LI+GL
Sbjct: 241 LWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGL 300

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C EG + +A  +F +L       +VVT+NT++ G CR      +L+L+  M         
Sbjct: 301 CDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV--- 357

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
            ++V+YN +I GL ++G +D+A  +   M  +    +  TY   I G C      +A  +
Sbjct: 358 -NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGV 416

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             E+   G   DV  + ++I+  CK  ++++ + L++ M + GV  ++   N+L+ G   
Sbjct: 417 MQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             R+S A  L   M   GC   V SYNILI   C+  K  +A    +EML   ++P + T
Sbjct: 477 DSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKT 536

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+ LL GL +   +  AL+L  +   + + PD       I GLC  G + +A+ V   + 
Sbjct: 537 YSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANME 596

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +  C   + TYN L+ G  K+     A  ++  +   G  PD+++ +T++  LC   ++ 
Sbjct: 597 HRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVS 656

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
            A +   D       P+  T+  L+R  V
Sbjct: 657 YAIEFFDDARNHGIFPTVYTWNILVRAVV 685



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 2/206 (0%)

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           S + Y+ +L  L +   +    ++++ ++  +   D     + I    KN     A+ VF
Sbjct: 42  SAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVF 101

Query: 458 QAIRNC-KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           + +R    CE  I +YN L+N   +  +      LF   +  G  P++ T + +I   CK
Sbjct: 102 KRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCK 161

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           + + +KA   L  M  +   P   ++ T++    +  K    + L  +M +E+ V  D++
Sbjct: 162 KKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEM-SERRVAPDVT 220

Query: 577 LSSKVVDLLSKDKKYRECLNQFRHLL 602
             + ++D   K+K ++  +  +  LL
Sbjct: 221 CYNILIDGFLKEKDHKMAMQLWDKLL 246


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 200/354 (56%), Gaps = 35/354 (9%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++M+P P +  F+ LLT + + K Y TV+SL+K+++S G+  + + LN+LIN  C +  
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              AF VLG IL+  + P+T TF  LI GLC EG+I EA +LF K+      P+V+T+ T
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 192 LINGLCRTRNTLVALKLFEEMVNE----------------------------FGAICK-- 221
           LINGLC+ R    AL LF +M+ +                            F A+    
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 222 --PDVVTYNSIIDGLCKDGFV---DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
             PD +T+N+++D LCK+G +   DKA  L  +M  + + P+ +TYN+LI G C V   +
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  LF EM+  G  PD+VT+  + +Y CK+ ++ +   LL+++    ++PD   Y+ +M
Sbjct: 241 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 300

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           DG C  G +  AR+LF  + SKG   DV +Y I+IN  C+   + +A  L+ EM
Sbjct: 301 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 199/362 (54%), Gaps = 7/362 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++V F+ L+  + R ++    L L+++M + FG     +  T N +I+  C    +  A
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQM-DSFG--IPHNTYTLNILINSFCHLNRLGFA 64

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +L  +      P+  T+ +LI G C      EA  LF +M   G QPDV+T+  +IN 
Sbjct: 65  FSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLING 124

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CKD ++ +   L   M+ +G++P+  TY+SL+ G C++G    A  LF +M+ +    D
Sbjct: 125 LCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 184

Query: 364 VYSYNILINANCKD---QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             ++N L++A CK+   Q ++ A+ L+ EM  + + P  +TYNTL+ GL  VG L DA+ 
Sbjct: 185 QLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIA 244

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L  +M +   +PD  T+    D LCKN  + EA+ + + I     +  I  Y+ +++G+C
Sbjct: 245 LFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMC 304

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G L+ A  LF +L  KG  PDV T + MI+ LC++G + +A+ L  +M+ +N + S  
Sbjct: 305 RAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD-ENDIESYS 363

Query: 541 TF 542
           TF
Sbjct: 364 TF 365



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 170/317 (53%), Gaps = 3/317 (0%)

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+++ ++ L+     +  +     L+ +M   G+  +  T N +IN  C   ++     +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L  +++ G  P T T+ +L+ G C+ G+I  A +LF  M  +G + DV +Y  LIN  CK
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           D+++ +A+ L+ +ML++ I P+  TY++L+ GL  +G+  +A++L   M    ++PD  T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 437 FATYIDGLCKNGFVL---EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           F T +D LCK G +    +A+ +F+ +          TYN LI+GLC +GRL+ A  LFH
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +   G IPD+VT   +  +LCK  ++ +A  LL  +E  N  P    +  ++ G  +  
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 554 KKSKVVVLLHKMAAEKL 570
           +      L  K++++ L
Sbjct: 308 ELEAARDLFSKLSSKGL 324



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 3/347 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P +V ++ ++  + +         L  QM    I  N  T N LI  FC ++    A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             +++  G QP   TF  +I   C +GK+ +  +L + M   G  PD +TY +L++G C 
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             +++ A  LF  M++KG   + ++Y+ LI+  C     ++A+ L+  M+  +I P  +T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 402 YNTLLSGLFQVGN---LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           +NTL+  L + G    +  A+ L ++M    ++PD+ T+ T I GLC  G + +A+ +F 
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +        + TY  L + LCK  RL  A  L   ++     PD+   S ++  +C+ G
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +++ A DL   + +K   P   T+  ++ G  Q    ++   L  +M
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 142/279 (50%), Gaps = 4/279 (1%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M++    P  V ++ L+     +   S    L+  M S G  H+ Y+ NILIN+ C   +
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +  A  +  ++L    +PS  T+ TL+ GL   G +G+AL+L DKM      PD  T+ T
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+GLCK+  + EA+ +F  +          TY+ LI+GLC +G  K A +LF+ + H+ 
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 500 PIPDVVTCSTMIHWLCKEGQ---MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +PD +T +T++  LCKEG    MDKA  L  +M  +  +P  VT+ TL+ G     +  
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
             + L H+M      + DL     + D L K+ +  E +
Sbjct: 241 DAIALFHEMVVYG-QIPDLVTYRILFDYLCKNHRLAEAM 278



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 143/261 (54%), Gaps = 6/261 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+  FD M      P + ++  L+  L K++Q    +SLF  + + G+ P+ F  + L
Sbjct: 97  GEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSL 156

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM---EAARLFKKLNV 179
           I+ LC +G    A  +   ++     P+ +TFN L++ LC EG I    +A  LF++++ 
Sbjct: 157 IHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQ 216

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+ VT+NTLI+GLC       A+ LF EMV  +G I  PD+VTY  + D LCK+  
Sbjct: 217 QGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMV-VYGQI--PDLVTYRILFDYLCKNHR 273

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           + +A  LL  ++  N++P++  Y+ ++ G C   + + A+ LF ++   G+ PDV T+  
Sbjct: 274 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 333

Query: 300 MINYNCKDGKMDKVNRLLELM 320
           MIN  C+ G + + ++L   M
Sbjct: 334 MINGLCQQGLLAEASKLFGEM 354



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 60/115 (52%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  F  M+     P + ++ IL   L KN +    + L K +    L PD+ + ++++
Sbjct: 241 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 300

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           + +C+ G    A  +  ++      P+  T+  +INGLC +G + EA++LF +++
Sbjct: 301 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 355


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 269/552 (48%), Gaps = 18/552 (3%)

Query: 41  FKDGTS-IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKN----- 94
           F+ G +  A  LN R +   +T  EA      +  ++ +    S+  +L  L +      
Sbjct: 47  FRRGRADAAALLNRRLRGAPVT--EACSLLSALPDVRDA---VSYNTVLAALCRRGGDHL 101

Query: 95  KQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTF 154
           +Q  +++    R       P+      ++  LC    T  A  +L  +  S    + VT+
Sbjct: 102 RQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTY 161

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
             LI GLC    +  A  L  ++      PNVV ++ L+ G CR+       K+FE+M  
Sbjct: 162 GTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSR 221

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                 KPDV+ +  +ID LCK+G   KA ++   M  R + PNV+TYN LI   C    
Sbjct: 222 RG---IKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGS 278

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG--VNPDTVTY 332
            +EA  L  EM D GV PDVVT+N +I       +MD+    LE MIQ    V PD VT+
Sbjct: 279 VREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTF 338

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           NS++ G C +GR+++A ++   M  +GC  ++ +YN LI    +  KV+ A+ L  E+  
Sbjct: 339 NSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAI 398

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             + P   TY+ L++G  ++  +  A K +  M+   +  + F +   +  +C+ G +  
Sbjct: 399 SGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMER 458

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A+ +F  + +  C L    Y+ +I+G CK G +KT  +L   +  +G  PD VT S +I+
Sbjct: 459 AMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLIN 517

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
              K G +++A  +L  M A   VP    F +L++G+    +  KV+ L+H+M A K V 
Sbjct: 518 MYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRA-KNVA 576

Query: 573 SDLSLSSKVVDL 584
            D  + S ++ L
Sbjct: 577 FDPKIISTIIRL 588



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 6/165 (3%)

Query: 431 VPDSFTFATYIDGLCKNG--FVLEAVQVFQAI-RNCKCELRIE--TYNCLINGLCKMGRL 485
           V D+ ++ T +  LC+ G   + +A  +   + R      R    +Y  ++ GLC   R 
Sbjct: 80  VRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRT 139

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A  L   +Q  G   DVVT  T+I  LC   ++D A +LL +M      P+ V +  L
Sbjct: 140 GEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCL 199

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           LRG+ ++ +   V  +   M + + +  D+ + + ++D L K+ K
Sbjct: 200 LRGYCRSGRWQDVGKVFEDM-SRRGIKPDVIMFTGLIDDLCKEGK 243


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 276/532 (51%), Gaps = 19/532 (3%)

Query: 66  VYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           ++ +  M   +  P   +F +L++ L +    +    +F +++  G  P+ F L +L+  
Sbjct: 138 IWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG 197

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
            C+ G+ S    +L  +  S   PN V +N +I+ LC EG+ +EA +L +K+      P+
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +VTFN  I  LC++   L A ++F +M ++E   + KP+ VTYN +++G C +G  ++A+
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            +   MK+     ++ +YN  + G        EA  +  EM +  ++P++ ++N +++  
Sbjct: 318 AIFDSMKNSE-TLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGL 376

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK G       +L LM + GV PDTVTY++L+ G+C  G+I  A  +   M+  GC  ++
Sbjct: 377 CKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNM 436

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           Y+ NIL+++  K+ +  +A  L + M         +T NT+++GL + GNL  A++++  
Sbjct: 437 YTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSG 496

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC--KCELRIETYNCLINGLCKM 482
           M         +T  +   G   N F    + +F  IRN   KC     TY  +I GLCK+
Sbjct: 497 M---------WTRGSASLGNLGNSF----IDLFD-IRNNGKKCLPDSITYATIIGGLCKV 542

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GR+  A K    +  K   PD +   T I+  CK+G++  A  +L +ME K C  S  T+
Sbjct: 543 GRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTY 602

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            +L++G    N+  ++  L+ +M  E+ +  ++   + ++  LS+  K ++ 
Sbjct: 603 NSLIQGLGSENQIFEIYGLMDEM-KERGIFPNVYTYNNIISCLSEGGKLKDA 653



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 237/484 (48%), Gaps = 35/484 (7%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFT--PNTVTF-NFLINGLCAEGRIMEAARLFKKLN 178
           L+  L  +G+   A     R LR  F   P  ++F N L      E R+     L+K + 
Sbjct: 87  LVRTLADLGLLENAISQF-RSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
           V    P   TFN LI+ LC       A ++F++M +E G  CKP+  +   ++ G C+ G
Sbjct: 146 VARVKPQTYTFNLLISALCEMGYLENAREVFDKM-SEKG--CKPNEFSLGILVRGYCRAG 202

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
                 +LL +M+     PN + YN++I   C      EA+ L  +M + G+ PD+VTFN
Sbjct: 203 LHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFN 262

Query: 299 AMINYNCKDGKMDKVNRL---LELMIQRGV-NPDTVTYNSLMDGFCLVGRISRARELFVS 354
             I   CK G++ + +R+   +++  + G+  P+TVTYN +++GFC  G    AR +F S
Sbjct: 263 CRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDS 322

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M +      + SYNI +    +  K+ +A  +  EM  + I+P++ +YN L+ GL + G 
Sbjct: 323 MKNSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGM 381

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
             DA  ++  M+ + V PD+ T++T + G C+ G +LEA  V + +    C   + T N 
Sbjct: 382 FSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNI 441

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM---- 530
           L++ L K GR   A  L   +  +G   D VTC+TMI+ LCK G +DKA +++  M    
Sbjct: 442 LLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG 501

Query: 531 -------------------EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
                                K C+P  +T+ T++ G  +  +  +    L +M  +KL 
Sbjct: 502 SASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLS 561

Query: 572 VSDL 575
              L
Sbjct: 562 PDSL 565



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 154/528 (29%), Positives = 253/528 (47%), Gaps = 35/528 (6%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   FD M K   +  + S+ I +  L ++ +      +   +    + P+L+  N+L+
Sbjct: 315 EARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILV 373

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G+ S A  +LG +  S   P+TVT++ L++G C  G+I+EA  + +++    C 
Sbjct: 374 HGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCF 433

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+ T N L++ L +      A  L + M+NE G     D VT N++I+GLCK G +DKA
Sbjct: 434 PNMYTCNILLHSLWKEGRASEAEDLLQ-MMNERGYGL--DNVTCNTMINGLCKAGNLDKA 490

Query: 244 KELLLQMKDRNIN-----------------------PNVITYNSLICGFCCVDDWKEAKC 280
            E++  M  R                          P+ ITY ++I G C V    EAK 
Sbjct: 491 IEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKK 550

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
             +EM+   + PD + F+  I   CK GK+    R+L+ M ++G N    TYNSL+ G  
Sbjct: 551 KLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLG 610

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
              +I     L   M  +G   +VY+YN +I+   +  K++DA CL  EML + I P++ 
Sbjct: 611 SENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIY 670

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T+  L+   F+  + G A +L + + L+        ++   + L   G  L+A ++F+A 
Sbjct: 671 TFRILIGAFFKACDFGAAQELFE-IALSLCGHKESLYSFMFNELLAGGETLKAKELFEAA 729

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            +    L+   Y  LI  LCK G+L  A  + H++  K    D  +   +I  L K G  
Sbjct: 730 LDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSK 789

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTL----LRGFVQNNKKSKVVVLLHK 564
             A++    M     + SE  F       +RG + NN +S    ++H+
Sbjct: 790 HAADEFAERMME---MASETDFNEHENKNIRGRLNNNDESDWQKIVHR 834


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 262/488 (53%), Gaps = 4/488 (0%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D    + +R+ ++G+ P +     LI   CKM     AF +   ++RS   P+ VT + L
Sbjct: 241 DAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSAL 300

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           ++GLC +GR  EA  LF++++     PN VT+ T I+ L + +    +L L  EMV+   
Sbjct: 301 VDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGV 360

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
           A+   D+V Y +++D L K+G +++AK++L      NI PN +TY  L+   C   +   
Sbjct: 361 AM---DLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDG 417

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A+ + ++M +  V P+VVTF++++N   K G + K    +  M   G+ P+ VTY +L+D
Sbjct: 418 AEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLID 477

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           GF        A +++  M+ +G   + +  + L+N   K+  +E+A  L+++M    +  
Sbjct: 478 GFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLL 537

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
             + Y TL+ GLF+ GN+  ALK+  ++   ++ PD+  +  +I+ LC+ G   EA    
Sbjct: 538 DHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFL 597

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +RN   E    TYN +I+  C+ G    A KL + ++     P+++T +T++  L + 
Sbjct: 598 KEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEA 657

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G ++KA  LL +M +    P+ +T+  +L+     ++   V++ +H++     + +D+++
Sbjct: 658 GVVEKAKYLLNEMASAGFTPTPLTYRRVLQA-CSGSRSPYVILEVHELMMGAGLHADITV 716

Query: 578 SSKVVDLL 585
            + +V +L
Sbjct: 717 YNTLVHVL 724



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 266/536 (49%), Gaps = 7/536 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKP--SPGMTSFTILLTMLAKNKQYDTV 100
           DG +++  L    ++G +   EA    + +++ +     G+  +  L+    K +     
Sbjct: 151 DGVTMSTALVGLSRTGLV--GEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAA 208

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           +++ +R+ + GL  D+   N L+      G    A+ V  R+      P+ VT   LI  
Sbjct: 209 LAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGE 268

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
            C   RI EA  L++ +      P+VVT + L++GLCR      A  LF EM ++ G   
Sbjct: 269 YCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREM-DKIG--V 325

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            P+ VTY + ID L K   V+++  LL +M  R +  +++ Y +++         +EAK 
Sbjct: 326 APNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKD 385

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +    + + + P+ VT+  +++ +C+ G +D   ++L  M ++ V+P+ VT++S+++G  
Sbjct: 386 VLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLV 445

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G I++A      M   G   +V +Y  LI+   K Q  E A+ +YR+ML E +  +  
Sbjct: 446 KRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNF 505

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
             ++L++GL + GN+ +A  L   M    ++ D   +AT +DGL K G +  A++V Q +
Sbjct: 506 IVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQEL 565

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                      YN  IN LC++G+   A      +++ G  PD  T +TMI   C+EG  
Sbjct: 566 MERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNT 625

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            KA  LL +M+  +  P+ +T+ TL+ G ++     K   LL++MA+     + L+
Sbjct: 626 SKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLT 681



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/570 (25%), Positives = 252/570 (44%), Gaps = 67/570 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NE++     M+    +  +  +T ++  L K  + +    + +   S+ + P+     +L
Sbjct: 346 NESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVL 405

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C+ G   GA  +L ++     +PN VTF+ ++NGL   G I +AA   +K+     
Sbjct: 406 VDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGI 465

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF------------------GAICKP-- 222
            PNVVT+ TLI+G  + +    AL ++ +M++E                   G I +   
Sbjct: 466 APNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEA 525

Query: 223 ------------DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                       D V Y +++DGL K G +  A ++  ++ +RN++P+ + YN  I   C
Sbjct: 526 LFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLC 585

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            +  + EAK    EM + G++PD  T+N MI+  C++G   K  +LL  M    + P+ +
Sbjct: 586 RLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLI 645

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKG------------------------------- 359
           TY +L+ G    G + +A+ L   M S G                               
Sbjct: 646 TYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELM 705

Query: 360 ----CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
                  D+  YN L++  C       A  +  EML   I P  IT+N L+ G  +  +L
Sbjct: 706 MGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHL 765

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A     +M    + P+  TF T + GL   G + EA  V   ++    E    TY+ L
Sbjct: 766 DNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDIL 825

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           + G  K      A +L+  +  KG IP   T +++I    K G M++A +L  +M+ +  
Sbjct: 826 VTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGV 885

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           + +  T+  LL G+ +    ++V +LL  M
Sbjct: 886 LHTSSTYDILLNGWSKLRNGTEVRILLKDM 915



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 245/522 (46%), Gaps = 38/522 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   ++ M++    P + + + L+  L ++ ++    +LF+ ++  G+ P+       
Sbjct: 276 EEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTF 335

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K+   + +  +LG ++      + V +  +++ L  EG+I EA  + +       
Sbjct: 336 IDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNI 395

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VT+  L++  CR  N   A ++  +M  +      P+VVT++SI++GL K G + K
Sbjct: 396 TPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKS---VSPNVVTFSSILNGLVKRGCIAK 452

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A   + +MKD  I PNV+TY +LI GF      + A  ++ +M+  GV+ +    ++++N
Sbjct: 453 AAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVN 512

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+G +++   L + M +RG+  D V Y +LMDG    G +  A ++   ++ +    
Sbjct: 513 GLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSP 572

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D   YN+ IN  C+  K  +A    +EM +  + P   TYNT++S   + GN   ALKL+
Sbjct: 573 DAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLL 632

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEA----------------------------- 453
           ++M+ + + P+  T+ T + GL + G V +A                             
Sbjct: 633 NEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGS 692

Query: 454 ------VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
                 ++V + +        I  YN L++ LC  G  + A  +   +  +G  PD +T 
Sbjct: 693 RSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITF 752

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           + +I   CK   +D A      M  +   P+  TF TLL G 
Sbjct: 753 NALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGL 794



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 248/488 (50%), Gaps = 14/488 (2%)

Query: 74  KMKPSPG--MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP----DLFVLNLLINCLC 127
           + +P PG  +T  +I+L+  + +      +SL +  +S+G  P    D    N+ +  L 
Sbjct: 72  RFRPVPGDPLTLNSIILSYCSLHA-LRPALSLLR--SSSGPQPQVAADTVSYNIFLAGLS 128

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDP-N 185
           + G    A  VL  + +     + VT +  + GL   G + EAA L + L      D   
Sbjct: 129 EQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLG 188

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           VV +N LI+G C+ ++   AL + E M  +  ++   DVV YN+++ G    G  D A E
Sbjct: 189 VVGWNALIDGYCKVQDMAAALAVVERMTTQGLSL---DVVGYNTLVAGFFYSGDADAAWE 245

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           +  +MK   + P+V+T+ +LI  +C +   +EA  L+  M+ +GV PDVVT +A+++  C
Sbjct: 246 VAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLC 305

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           +DG+  +   L   M + GV P+ VTY + +D    V R++ +  L   MVS+G   D+ 
Sbjct: 306 RDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLV 365

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            Y  +++   K+ K+E+A  + R  LS+ I P+ +TY  L+    + GN+  A +++ +M
Sbjct: 366 MYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQM 425

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +   V P+  TF++ ++GL K G + +A    + +++      + TY  LI+G  K    
Sbjct: 426 EEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQ 485

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A  ++  + H+G   +     ++++ L K G +++A  L  DM  +  +   V + TL
Sbjct: 486 EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATL 545

Query: 546 LRGFVQNN 553
           + G  +  
Sbjct: 546 MDGLFKTG 553



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 243/532 (45%), Gaps = 35/532 (6%)

Query: 51  LNDRH-KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           L D H ++GNI   E +     M +   SP + +F+ +L  L K           +++  
Sbjct: 405 LVDAHCRAGNIDGAEQMLL--QMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKD 462

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           +G+ P++     LI+   K      A  V   +L      N    + L+NGL   G I E
Sbjct: 463 SGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEE 522

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------FG 217
           A  LFK +       + V + TL++GL +T N   ALK+ +E++                
Sbjct: 523 AEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFIN 582

Query: 218 AICK--------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            +C+                    PD  TYN++I   C++G   KA +LL +MK  +I P
Sbjct: 583 CLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKP 642

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N+ITY +L+ G       ++AK L  EM   G  P  +T+  ++           +  + 
Sbjct: 643 NLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVH 702

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           ELM+  G++ D   YN+L+   C  G   +A  +   M+ +G   D  ++N LI  +CK 
Sbjct: 703 ELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKS 762

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             +++A   Y +ML + + P++ T+NTLL GL   G +G+A  +I +M+   + P++ T+
Sbjct: 763 SHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTY 822

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              + G  K    +EA++++  + +     +  TYN LI+   K G +  A +LF  ++ 
Sbjct: 823 DILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKR 882

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           +G +    T   +++   K     +   LL DM+     PS+ T  ++ R F
Sbjct: 883 RGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAF 934



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 213/443 (48%), Gaps = 7/443 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+  L KN   +   +LFK +   GL  D      L++ L K G    A  V   ++   
Sbjct: 510 LVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERN 569

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
            +P+ V +N  IN LC  G+  EA    K++     +P+  T+NT+I+  CR  NT  AL
Sbjct: 570 LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKAL 629

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           KL  EM  ++ +I KP+++TY +++ GL + G V+KAK LL +M      P  +TY  ++
Sbjct: 630 KLLNEM--KWSSI-KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVL 686

Query: 267 CGFCCVDDWKEAKCLFIE--MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
               C         L +   MM  G+  D+  +N +++  C  G   K   +L+ M+ RG
Sbjct: 687 Q--ACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRG 744

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PDT+T+N+L+ G C    +  A   +  M+ +G   ++ ++N L+       ++ +A 
Sbjct: 745 IAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEAD 804

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            +  EM    + P+ +TY+ L++G  +  N  +AL+L  +M     +P + T+ + I   
Sbjct: 805 TVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDF 864

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K G + +A ++F  ++         TY+ L+NG  K+        L   ++  G  P  
Sbjct: 865 AKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSK 924

Query: 505 VTCSTMIHWLCKEGQMDKANDLL 527
            T S+M     K G   +A  LL
Sbjct: 925 GTISSMSRAFSKPGMTWEARRLL 947



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 196/418 (46%), Gaps = 5/418 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + A  ++   K+GN+ +  A+     +++   SP    + + +  L +  ++    S
Sbjct: 538 DHVNYATLMDGLFKTGNMPA--ALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKS 595

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
             K + + GL PD    N +I+  C+ G TS A  +L  +  S   PN +T+  L+ GL 
Sbjct: 596 FLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLL 655

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G + +A  L  ++      P  +T+  ++     +R+  V L++ E M+   GA    
Sbjct: 656 EAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMM---GAGLHA 712

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D+  YN+++  LC  G   KA  +L +M  R I P+ IT+N+LI G C       A   +
Sbjct: 713 DITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATY 772

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M+  G+ P++ TFN ++      G++ + + ++  M + G+ P+ +TY+ L+ G+   
Sbjct: 773 AQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKK 832

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
                A  L+  MVSKG      +YN LI+   K   +  A  L+ EM    +  +  TY
Sbjct: 833 SNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTY 892

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           + LL+G  ++ N  +   L+  M+     P   T ++      K G   EA ++ + +
Sbjct: 893 DILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 169/390 (43%), Gaps = 52/390 (13%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             P       +I  L   G V  A         R +  + +T NS+I  +C +   + A 
Sbjct: 47  APPPARLLRRLIPALASSGLVAAASRF------RPVPGDPLTLNSIILSYCSLHALRPAL 100

Query: 280 CLFIEMMDNGVQP----DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            L      +G QP    D V++N  +    + G       +L  M +RGV  D VT ++ 
Sbjct: 101 SLLRS--SSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTA 158

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHD---VYSYNILINANCKDQKVEDAVCLYREMLS 392
           + G    G +  A  L   M+ +G   D   V  +N LI+  CK Q +  A+ +   M +
Sbjct: 159 LVGLSRTGLVGEAAAL-AEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTT 217

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           + +   V+ YNTL++G F  G+   A ++ ++M+ + V P                    
Sbjct: 218 QGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPS------------------- 258

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
                           + T+  LI   CKM R++ A  L+  +   G +PDVVT S ++ 
Sbjct: 259 ----------------VVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVD 302

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            LC++G+  +A  L  +M+     P+ VT+CT +    +  + ++ + LL +M + + V 
Sbjct: 303 GLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVS-RGVA 361

Query: 573 SDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            DL + + V+D L K+ K  E  +  RH L
Sbjct: 362 MDLVMYTTVMDRLGKEGKIEEAKDVLRHAL 391



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 3/212 (1%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+ PD    N LI   CK      AF    ++L    +PN  TFN L+ GL + GRI EA
Sbjct: 744 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA 803

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             +  ++     +PN +T++ L+ G  +  N + AL+L+ EMV++ G I  P   TYNS+
Sbjct: 804 DTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK-GFI--PKASTYNSL 860

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           I    K G +++AKEL  +MK R +     TY+ L+ G+  + +  E + L  +M + G 
Sbjct: 861 ISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGF 920

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           +P   T ++M     K G   +  RLL+ + +
Sbjct: 921 KPSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 231/440 (52%), Gaps = 3/440 (0%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P+    ++LI+ LC+ G    AF +   ++     P+T T+  LI   C  G   +A ++
Sbjct: 263 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 322

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             ++   AC PNV T+  LI+ LCR      A  +F +M+     +C P ++T+N++I+G
Sbjct: 323 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH--GLC-PGIITFNALING 379

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            CK+G+V  A +LL  M+  N  PN+ TYN L+ G C V    +A  L   ++DNG+ PD
Sbjct: 380 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 439

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            VT+N +++  CK+G+++    +   M   G+ PD  T+ +L+DG C +GR+ +A  +  
Sbjct: 440 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 499

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
           SMV KG   D  ++  LI+ +CK  K +D   L+  M+  R   +  T+N  L  L +  
Sbjct: 500 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 559

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L +A  ++ KM    +VP   T    I+G C+ G    ++++ + ++   C   + TY 
Sbjct: 560 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 619

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +INGLC  GR++ A  +   +   G  P+  T + ++    K G++D+A  ++  M   
Sbjct: 620 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 679

Query: 534 NCVPSEVTFCTLLRGFVQNN 553
            C P+   +  LL GFV +N
Sbjct: 680 GCQPNSHIYSALLSGFVLSN 699



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 162/561 (28%), Positives = 275/561 (49%), Gaps = 26/561 (4%)

Query: 63  NEAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            EA   F+ M K +   P   +++IL+  L +  + +    L + +   G  P      +
Sbjct: 246 GEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTV 305

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI   C +G+T  A  +L  +      PN  T+  LI+ LC EG+I EA  +F+K+    
Sbjct: 306 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 365

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P ++TFN LING C+    + A +L   M  E G  CKP++ TYN +++GLC+     
Sbjct: 366 LCPGIITFNALINGYCKEGWVVSAFQLLSVM--EKGN-CKPNIRTYNELMEGLCRVSKSY 422

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA  LL ++ D  + P+ +TYN L+ GFC       A  +F  M   G++PD  TF A+I
Sbjct: 423 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALI 482

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK G++++ N +L  M+++G++ D VT+ +L+DG C +G+      LF +MV   C 
Sbjct: 483 DGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 542

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
              +++N  ++A  KD K+ +A  +  +M+   + PSV+T+  L+ G  + G    +LK+
Sbjct: 543 TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 602

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +++M+     P+ +T+   I+GLC NG V EA  +  ++ +        TY  L+    K
Sbjct: 603 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 662

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMI------------HWLCKEGQMD-------K 522
            GRL  A ++   +   G  P+    S ++              L   G +D       +
Sbjct: 663 AGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEE 722

Query: 523 ANDLLLDMEAKNC-VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            ++  L  E K C VP+E  +  L+ G  +  +  +   L   M    L   D ++SS +
Sbjct: 723 NDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGL-FPDKAISS-I 780

Query: 582 VDLLSKDKKYRECLNQFRHLL 602
           ++   K  KY  CL   + +L
Sbjct: 781 IEHYCKTCKYDNCLEFMKLVL 801



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 239/485 (49%), Gaps = 4/485 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           ++ LL  LAK         +++R+ + G          ++N LCK G    A +   ++L
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-CDPNVVTFNTLINGLCRTRNT 202
           R  F  +T     L+   C    + EA R+F+K++    C PN VT++ LI+GLC     
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A +L +EMV +    C+P   TY  +I   C  G  DKA ++L +M  +   PNV TY
Sbjct: 282 EEAFQLKQEMVEKG---CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 338

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             LI   C     +EA  +F +M+ +G+ P ++TFNA+IN  CK+G +    +LL +M +
Sbjct: 339 TILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK 398

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
               P+  TYN LM+G C V +  +A  L   +V  G   D  +YNIL++  CK+ ++  
Sbjct: 399 GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM 458

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  ++  M S  + P   T+  L+ GL ++G L  A  ++  M    +  D  TF   ID
Sbjct: 459 AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALID 518

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G CK G   +   +F+ +   +C     T+NC ++ L K  +L  A  +  ++   G +P
Sbjct: 519 GHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVP 578

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
            VVT + +I   C+ G+   +  +L  M+   C P+  T+  ++ G   N +  +   +L
Sbjct: 579 SVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 638

Query: 563 HKMAA 567
             M++
Sbjct: 639 FSMSS 643



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 263/548 (47%), Gaps = 24/548 (4%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++A+   D M      P + ++TIL+  L +  + +    +F+++  +GL P +   N 
Sbjct: 316 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 375

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LIN  CK G    AF +L  + +    PN  T+N L+ GLC   +  +A  L +++    
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ VT+N L++G C+     +A  +F  M N  G   +PD  T+ ++IDGLCK G ++
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSM-NSAGL--EPDGFTFTALIDGLCKLGRLE 492

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  +L  M  + I+ + +T+ +LI G C +   K+   LF  M++N       TFN  +
Sbjct: 493 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 552

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   KD K+++ N +L  M++ G+ P  VT+  L++G C  G  + + ++   M   GC 
Sbjct: 553 DALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 612

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +VY+Y I+IN  C + +VE+A  +   M S  + P+  TY  L+    + G L  A ++
Sbjct: 613 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQI 672

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA-------------VQVFQAIRNC----- 463
           +  M  N   P+S  ++  + G   +   + A             +   +   NC     
Sbjct: 673 VSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEI 732

Query: 464 -KCELRIET-YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
            KC +  E  YN L+ GLCK GR+  A +L   +   G  PD    S + H+ CK  + D
Sbjct: 733 KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHY-CKTCKYD 791

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
              + +  +     VPS  ++C ++ G     +  +   L+  +     +  ++ ++  +
Sbjct: 792 NCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSI 851

Query: 582 VDLLSKDK 589
             L+ +++
Sbjct: 852 EFLMKEEE 859



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 207/455 (45%), Gaps = 43/455 (9%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF--KKLNV 179
           L+ CL K+ +   AF+V  R++   F    + +  ++N LC  G  ++AA +F  K L +
Sbjct: 165 LLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNG-FVQAAEMFCCKVLRL 223

Query: 180 -FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
            F  D +V T   L N  CR  +   A ++FE+M                          
Sbjct: 224 GFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMS------------------------- 256

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
                       K+ N  PN +TY+ LI G C     +EA  L  EM++ G QP   T+ 
Sbjct: 257 ------------KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 304

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I   C  G  DK  ++L+ M  +   P+  TY  L+D  C  G+I  A  +F  M+  
Sbjct: 305 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G    + ++N LIN  CK+  V  A  L   M     +P++ TYN L+ GL +V     A
Sbjct: 365 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 424

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L+ ++  N ++PD  T+   +DG CK G +  A  +F ++ +   E    T+  LI+G
Sbjct: 425 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 484

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LCK+GRL+ A  +   +  KG   D VT + +I   CK G+      L  +M    C+ +
Sbjct: 485 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 544

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
             TF   L    ++ K ++   +L KM    LV S
Sbjct: 545 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 579



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 209/443 (47%), Gaps = 19/443 (4%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++ IL+    K  Q +   ++F  +NS GL PD F    LI+ LCK+G    A  +
Sbjct: 438 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 497

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           LG +++   + + VTF  LI+G C  G+  +   LF+ +    C     TFN  ++ L +
Sbjct: 498 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 557

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +  +M+ ++G +  P VVT+  +I+G C+ G    + ++L +MK    +PN
Sbjct: 558 DYKLNEANAMLGKMM-KYGLV--PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 614

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TY  +I G C     +EA+ +   M   GV P+  T+  ++  + K G++D+  +++ 
Sbjct: 615 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 674

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M++ G  P++  Y++L+ GF L      AR L              S    ++A     
Sbjct: 675 TMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL--------------SSTGDLDARSLSS 720

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +  D  CL  E+    + P+   YN L+ GL + G + +A +L   M  + + PD    +
Sbjct: 721 EENDNNCLSNEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AIS 778

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + I+  CK       ++  + + + K      +Y  +I+GL   GR++ A KL   L   
Sbjct: 779 SIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 838

Query: 499 GPIPDVVTCSTMIHWLCKEGQMD 521
             I + V  +  I +L KE + D
Sbjct: 839 TGIEEEVEVTPSIEFLMKEEEDD 861



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 183/392 (46%), Gaps = 39/392 (9%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           ++TL+  L +     VA  ++  MVNE   +   D   Y ++++ LCK+GFV  A+    
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGID---YRTVVNALCKNGFVQAAEM--- 215

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
                               FCC            +++  G   D     +++  NC+  
Sbjct: 216 --------------------FCC------------KVLRLGFGLDTHVCTSLVLANCRRD 243

Query: 309 KMDKVNRLLELMI-QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            + +  R+ E M  +    P++VTY+ L+ G C  GR+  A +L   MV KGC+    +Y
Sbjct: 244 DLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTY 303

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
            +LI A C     + A+ +  EM ++   P+V TY  L+  L + G + +A  +  KM  
Sbjct: 304 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 363

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + + P   TF   I+G CK G+V+ A Q+   +    C+  I TYN L+ GLC++ +   
Sbjct: 364 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 423

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  L  R+   G +PD VT + ++   CKEGQ++ A ++   M +    P   TF  L+ 
Sbjct: 424 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           G  +  +  +   +L  M  + + + +++ ++
Sbjct: 484 GLCKLGRLEQANGILGSMVKKGISLDEVTFTA 515



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 8/211 (3%)

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND-VVPDSFTFATYIDGLCKNGFVLEAV 454
           R S   Y+TLL  L ++ N+G    L+ +  +N+  V     + T ++ LCKNGFV +A 
Sbjct: 156 RLSYPCYSTLLMCLAKL-NMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFV-QAA 213

Query: 455 QVFQAIRNCKCELRIETYNC--LINGLCKMGRLKTACKLFHRL-QHKGPIPDVVTCSTMI 511
           ++F   +  +    ++T+ C  L+   C+   L  A ++F ++ + +   P+ VT S +I
Sbjct: 214 EMF-CCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILI 272

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           H LC+ G++++A  L  +M  K C PS  T+  L++         K + +L +MA  K  
Sbjct: 273 HGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT-KAC 331

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           V ++   + ++D L ++ K  E    FR +L
Sbjct: 332 VPNVHTYTILIDRLCREGKIEEANGVFRKML 362


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 254/542 (46%), Gaps = 59/542 (10%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           + +  M+    SP   +F +L+  L  +   D    LF  +   G  P+ F   +L+   
Sbjct: 133 WLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY 192

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           CK G+T     +L  +      PN V +N +++  C EGR  ++ +L +K+      P++
Sbjct: 193 CKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDI 252

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           VTFN+ I+ LC+    L A ++F +M ++E+  + +P+ +TYN ++ G CK G ++ AK 
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312

Query: 246 L-----------------------------------LLQMKDRNINPNVITYNSLICGFC 270
           L                                   L QM D+ I P++ +YN L+ G C
Sbjct: 313 LFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLC 372

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            +    +AK +   M  NGV PD VT+  +++  C  GK+D    LL+ M++    P+  
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           T N L+     +GRIS A EL   M  KG   D  + NI+++  C   +++ A+ + + M
Sbjct: 433 TCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492

Query: 391 -----------------------LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
                                  +     P +ITY+TLL+GL + G   +A  L  +M  
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMG 552

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + PDS  +  +I   CK G +  A +V + +    C   +ETYN LI GL    ++  
Sbjct: 553 EKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
              L   ++ KG  P++ T +T I +LC+ G+++ A +LL +M  KN  P+  +F  L+ 
Sbjct: 613 IHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIG 672

Query: 548 GF 549
            F
Sbjct: 673 AF 674



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 161/553 (29%), Positives = 263/553 (47%), Gaps = 35/553 (6%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG+  + +LL    + ++ + V  L+K +   G+ P+ +  NLLI  LC       A  +
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +      PN  TF  L+ G C  G   +   L   +  F   PN V +NT+++  CR
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK-DRNIN- 256
                 + KL E+M  E G +  PD+VT+NS I  LCK+G V  A  +   M+ D  +  
Sbjct: 230 EGRNDDSEKLVEKMREE-GLV--PDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286

Query: 257 --PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PN ITYN ++ GFC V   ++AK LF  + +N     + ++N  +    + GK  +  
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAE 346

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            +L+ MI +G+ P   +YN LMDG C +G +S A+ +   M   G   D  +Y  L++  
Sbjct: 347 TVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGY 406

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   KV+ A  L +EM+     P+  T N LL  L+ +G + +A +L+ KM       D+
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDT 466

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIR-------------------------NCKCELRI 469
            T    +DGLC +G + +A+++ + +R                         NC  +L  
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI- 525

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY+ L+NGLCK GR   A  LF  +  +   PD +  +  IH  CK+G++  A  +L D
Sbjct: 526 -TYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKD 584

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           ME K C  S  T+ +L+ G    N+  ++  L+ +M  EK +  ++   +  +  L +  
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM-REKGISPNICTYNTAIQYLCEGG 643

Query: 590 KYRECLNQFRHLL 602
           K  +  N    ++
Sbjct: 644 KVEDATNLLDEMM 656



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 235/473 (49%), Gaps = 27/473 (5%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + S+ I L  L ++ ++    ++ K++   G+ P ++  N+L++ LCK+G+ S A  ++G
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            + R+  +P+ VT+  L++G C+ G++  A  L +++    C PN  T N L++ L    
Sbjct: 386 LMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMG 445

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK--------- 251
               A +L  +M NE G     D VT N I+DGLC  G +DKA E++  M+         
Sbjct: 446 RISEAEELLRKM-NEKGY--GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502

Query: 252 --------------DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
                         + N  P++ITY++L+ G C    + EAK LF EMM   +QPD + +
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAY 562

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N  I++ CK GK+    R+L+ M ++G +    TYNSL+ G  +  +I     L   M  
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMRE 622

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           KG   ++ +YN  I   C+  KVEDA  L  EM+ + I P+V ++  L+    +V +  D
Sbjct: 623 KGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDF-D 681

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
             + + +  ++        ++   + L   G +L+A ++ +A+ +   EL    Y  L+ 
Sbjct: 682 MAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVV 741

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            LCK   L+ A  + H++  KG   D      +I  L K G   +AN+    M
Sbjct: 742 SLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKM 794



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 181/352 (51%), Gaps = 10/352 (2%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC---CVDDWKE 277
           KP +  YN +++   ++  V+    L   M    I+P   T+N LI   C   CVD  +E
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
              LF EM + G +P+  TF  ++   CK G  DK   LL  M   GV P+ V YN+++ 
Sbjct: 169 ---LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVS 225

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM-LSERI- 395
            FC  GR   + +L   M  +G   D+ ++N  I+A CK+ KV DA  ++ +M L E + 
Sbjct: 226 SFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285

Query: 396 --RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             RP+ ITYN +L G  +VG L DA  L + ++ ND +    ++  ++ GL ++G  +EA
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEA 345

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             V + + +      I +YN L++GLCK+G L  A  +   ++  G  PD VT   ++H 
Sbjct: 346 ETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHG 405

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            C  G++D A  LL +M   NC+P+  T   LL       + S+   LL KM
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKM 457



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 31/296 (10%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN+ ++      D +I+    P + +++ LL  L K  ++    +LF  +    L PD  
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSL 560

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N+ I+  CK G  S AF VL  + +     +  T+N LI GL  + +I E   L  ++
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------FGAICK-PD- 223
                 PN+ T+NT I  LC       A  L +EM+ +             GA CK PD 
Sbjct: 621 REKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDF 680

Query: 224 ---------VVT--------YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
                     V+        Y+ + + L   G + KA ELL  + DR        Y  L+
Sbjct: 681 DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLV 740

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
              C  D+ + A  +  +M+D G   D      +I+   K G   + N   E M++
Sbjct: 741 VSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMME 796


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 231/440 (52%), Gaps = 3/440 (0%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P+    ++LI+ LC+ G    AF +   ++     P+T T+  LI   C  G   +A ++
Sbjct: 240 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 299

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             ++   AC PNV T+  LI+ LCR      A  +F +M+     +C P ++T+N++I+G
Sbjct: 300 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH--GLC-PGIITFNALING 356

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            CK+G+V  A +LL  M+  N  PN+ TYN L+ G C V    +A  L   ++DNG+ PD
Sbjct: 357 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 416

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            VT+N +++  CK+G+++    +   M   G+ PD  T+ +L+DG C +GR+ +A  +  
Sbjct: 417 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 476

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
           SMV KG   D  ++  LI+ +CK  K +D   L+  M+  R   +  T+N  L  L +  
Sbjct: 477 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 536

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L +A  ++ KM    +VP   T    I+G C+ G    ++++ + ++   C   + TY 
Sbjct: 537 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 596

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +INGLC  GR++ A  +   +   G  P+  T + ++    K G++D+A  ++  M   
Sbjct: 597 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 656

Query: 534 NCVPSEVTFCTLLRGFVQNN 553
            C P+   +  LL GFV +N
Sbjct: 657 GCQPNSHIYSALLSGFVLSN 676



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 231/442 (52%), Gaps = 4/442 (0%)

Query: 63  NEAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            EA   F+ M K +   P   +++IL+  L +  + +    L + +   G  P      +
Sbjct: 223 GEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTV 282

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI   C +G+T  A  +L  +      PN  T+  LI+ LC EG+I EA  +F+K+    
Sbjct: 283 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 342

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P ++TFN LING C+    + A +L   M  E G  CKP++ TYN +++GLC+     
Sbjct: 343 LCPGIITFNALINGYCKEGWVVSAFQLLSVM--EKGN-CKPNIRTYNELMEGLCRVSKSY 399

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA  LL ++ D  + P+ +TYN L+ GFC       A  +F  M   G++PD  TF A+I
Sbjct: 400 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALI 459

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK G++++ N +L  M+++G++ D VT+ +L+DG C +G+      LF +MV   C 
Sbjct: 460 DGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 519

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
              +++N  ++A  KD K+ +A  +  +M+   + PSV+T+  L+ G  + G    +LK+
Sbjct: 520 TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 579

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +++M+     P+ +T+   I+GLC NG V EA  +  ++ +        TY  L+    K
Sbjct: 580 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 639

Query: 482 MGRLKTACKLFHRLQHKGPIPD 503
            GRL  A ++   +   G  P+
Sbjct: 640 AGRLDRAFQIVSTMVKNGCQPN 661



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 239/485 (49%), Gaps = 4/485 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           ++ LL  LAK         +++R+ + G          ++N LCK G    A +   ++L
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-CDPNVVTFNTLINGLCRTRNT 202
           R  F  +T     L+   C    + EA R+F+K++    C PN VT++ LI+GLC     
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A +L +EMV +    C+P   TY  +I   C  G  DKA ++L +M  +   PNV TY
Sbjct: 259 EEAFQLKQEMVEKG---CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 315

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             LI   C     +EA  +F +M+ +G+ P ++TFNA+IN  CK+G +    +LL +M +
Sbjct: 316 TILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK 375

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
               P+  TYN LM+G C V +  +A  L   +V  G   D  +YNIL++  CK+ ++  
Sbjct: 376 GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM 435

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  ++  M S  + P   T+  L+ GL ++G L  A  ++  M    +  D  TF   ID
Sbjct: 436 AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALID 495

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G CK G   +   +F+ +   +C     T+NC ++ L K  +L  A  +  ++   G +P
Sbjct: 496 GHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVP 555

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
            VVT + +I   C+ G+   +  +L  M+   C P+  T+  ++ G   N +  +   +L
Sbjct: 556 SVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 615

Query: 563 HKMAA 567
             M++
Sbjct: 616 FSMSS 620



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 265/564 (46%), Gaps = 40/564 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++A+   D M      P + ++TIL+  L +  + +    +F+++  +GL P +   N 
Sbjct: 293 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 352

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LIN  CK G    AF +L  + +    PN  T+N L+ GLC   +  +A  L +++    
Sbjct: 353 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ VT+N L++G C+     +A  +F  M N  G   +PD  T+ ++IDGLCK G ++
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSM-NSAGL--EPDGFTFTALIDGLCKLGRLE 469

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  +L  M  + I+ + +T+ +LI G C +   K+   LF  M++N       TFN  +
Sbjct: 470 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 529

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   KD K+++ N +L  M++ G+ P  VT+  L++G C  G  + + ++   M   GC 
Sbjct: 530 DALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 589

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +VY+Y I+IN  C + +VE+A  +   M S  + P+  TY  L+    + G L  A ++
Sbjct: 590 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQI 649

Query: 422 IDKMQLNDVVPDSFTFATYIDGL-------------------------------CKNGFV 450
           +  M  N   P+S  ++  + G                                C +  V
Sbjct: 650 VSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHV 709

Query: 451 LEAVQVFQA--IRN--CKCELRIET-YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
              + V  A  IR+   KC +  E  YN L+ GLCK GR+  A +L   +   G  PD  
Sbjct: 710 FRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 769

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             S + H+ CK  + D   + +  +     VPS  ++C ++ G     +  +   L+  +
Sbjct: 770 ISSIIEHY-CKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 828

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDK 589
                +  ++ ++  +  L+ +++
Sbjct: 829 VRHTGIEEEVEVTPSIEFLMKEEE 852



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 207/455 (45%), Gaps = 43/455 (9%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF--KKLNV 179
           L+ CL K+ +   AF+V  R++   F    + +  ++N LC  G  ++AA +F  K L +
Sbjct: 142 LLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNG-FVQAAEMFCCKVLRL 200

Query: 180 -FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
            F  D +V T   L N  CR  +   A ++FE+M                          
Sbjct: 201 GFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMS------------------------- 233

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
                       K+ N  PN +TY+ LI G C     +EA  L  EM++ G QP   T+ 
Sbjct: 234 ------------KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 281

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I   C  G  DK  ++L+ M  +   P+  TY  L+D  C  G+I  A  +F  M+  
Sbjct: 282 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G    + ++N LIN  CK+  V  A  L   M     +P++ TYN L+ GL +V     A
Sbjct: 342 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 401

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L+ ++  N ++PD  T+   +DG CK G +  A  +F ++ +   E    T+  LI+G
Sbjct: 402 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 461

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LCK+GRL+ A  +   +  KG   D VT + +I   CK G+      L  +M    C+ +
Sbjct: 462 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 521

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
             TF   L    ++ K ++   +L KM    LV S
Sbjct: 522 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 556



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 216/445 (48%), Gaps = 7/445 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++ IL+    K  Q +   ++F  +NS GL PD F    LI+ LCK+G    A  +
Sbjct: 415 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 474

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           LG +++   + + VTF  LI+G C  G+  +   LF+ +    C     TFN  ++ L +
Sbjct: 475 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 534

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +  +M+ ++G +  P VVT+  +I+G C+ G    + ++L +MK    +PN
Sbjct: 535 DYKLNEANAMLGKMM-KYGLV--PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 591

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TY  +I G C     +EA+ +   M   GV P+  T+  ++  + K G++D+  +++ 
Sbjct: 592 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 651

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS--MVSKGCRHDVYSYNILINANCK 376
            M++ G  P++  Y++L+ GF L      AR L  +  + ++    +    N L +   +
Sbjct: 652 TMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFR 711

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
              V+ A+ + R+ + +   P+   YN L+ GL + G + +A +L   M  + + PD   
Sbjct: 712 LMDVDHALKI-RDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-A 769

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
            ++ I+  CK       ++  + + + K      +Y  +I+GL   GR++ A KL   L 
Sbjct: 770 ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 829

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMD 521
               I + V  +  I +L KE + D
Sbjct: 830 RHTGIEEEVEVTPSIEFLMKEEEDD 854



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 183/392 (46%), Gaps = 39/392 (9%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           ++TL+  L +     VA  ++  MVNE   +   D   Y ++++ LCK+GFV  A+    
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGID---YRTVVNALCKNGFVQAAEM--- 192

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
                               FCC            +++  G   D     +++  NC+  
Sbjct: 193 --------------------FCC------------KVLRLGFGLDTHVCTSLVLANCRRD 220

Query: 309 KMDKVNRLLELMI-QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            + +  R+ E M  +    P++VTY+ L+ G C  GR+  A +L   MV KGC+    +Y
Sbjct: 221 DLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTY 280

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
            +LI A C     + A+ +  EM ++   P+V TY  L+  L + G + +A  +  KM  
Sbjct: 281 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 340

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + + P   TF   I+G CK G+V+ A Q+   +    C+  I TYN L+ GLC++ +   
Sbjct: 341 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  L  R+   G +PD VT + ++   CKEGQ++ A ++   M +    P   TF  L+ 
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           G  +  +  +   +L  M  + + + +++ ++
Sbjct: 461 GLCKLGRLEQANGILGSMVKKGISLDEVTFTA 492



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 8/211 (3%)

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND-VVPDSFTFATYIDGLCKNGFVLEAV 454
           R S   Y+TLL  L ++ N+G    L+ +  +N+  V     + T ++ LCKNGFV +A 
Sbjct: 133 RLSYPCYSTLLMCLAKL-NMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFV-QAA 190

Query: 455 QVFQAIRNCKCELRIETYNC--LINGLCKMGRLKTACKLFHRL-QHKGPIPDVVTCSTMI 511
           ++F   +  +    ++T+ C  L+   C+   L  A ++F ++ + +   P+ VT S +I
Sbjct: 191 EMF-CCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILI 249

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           H LC+ G++++A  L  +M  K C PS  T+  L++         K + +L +MA  K  
Sbjct: 250 HGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT-KAC 308

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           V ++   + ++D L ++ K  E    FR +L
Sbjct: 309 VPNVHTYTILIDRLCREGKIEEANGVFRKML 339


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 258/519 (49%), Gaps = 39/519 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRL----NSNGLFPDLFVLNLLINCLCKMG-ITS 133
           P + +   LL  L K+ + D  + L+ ++    +  G   D +  ++++  LC +G I  
Sbjct: 160 PTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEE 219

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
           G  +V  R  + C  P+ V +N +I+G C +G +  A R  K+L +    P V T+  LI
Sbjct: 220 GRRLVKDRWGKGC-VPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALI 278

Query: 194 NGLCRTRNTLVALKLFEEMVN------------------EFGAI--------------CK 221
           NG C+        +L  EM                    ++G +              C 
Sbjct: 279 NGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCG 338

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD+ TYN++I+  CK G + +A E L + K+R + PN  +Y  L+  +C   D+ +A  +
Sbjct: 339 PDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGM 398

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              + + G +PD+V++ A I+     G++D    + E M+++GV PD   YN LM G C 
Sbjct: 399 LFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCK 458

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            GR    + L   M+ +  + DVY +  L++   ++ ++++A+ +++ ++ + + P ++ 
Sbjct: 459 NGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVG 518

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN ++ G  + G + DAL  ++KM+     PD +T++T IDG  K   +  A+++F  + 
Sbjct: 519 YNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMM 578

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
             K +  + TY  LING CK   +  A K+F  ++    +P+VVT +T++    K G+ +
Sbjct: 579 KHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPE 638

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           KA  +   M    C P++ TF  L+ G   N   S V++
Sbjct: 639 KATSIFELMLMNGCPPNDATFHYLINGLT-NTATSPVLI 676



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 249/527 (47%), Gaps = 43/527 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMGITSGAFV 137
           P   +F+ L+    ++   D  + LF  +   +   P +   N L+N L K G    A  
Sbjct: 124 PTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQ 183

Query: 138 VLGRILRSCFTPNTVTFNF----LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
           +  ++L++      V  N+    ++ GLC  G+I E  RL K      C P+VV +N +I
Sbjct: 184 LYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMII 243

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           +G C+  +   A +  +E+  + G +  P V TY ++I+G CK G  +   +LL +M  R
Sbjct: 244 DGYCKKGDLQCATRTLKELKMK-GVL--PTVETYGALINGFCKAGEFEAVDQLLTEMAAR 300

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            +N NV  +N++I          +A      M + G  PD+ T+N MIN++CK G++ + 
Sbjct: 301 GLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEA 360

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           +  LE   +RG+ P+  +Y  LM  +C  G   +A  +   +   G + D+ SY   I+ 
Sbjct: 361 DEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHG 420

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
                +++ A+ +  +M+ + + P    YN L+SGL + G       L+ +M   +V PD
Sbjct: 421 VVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPD 480

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR--------- 484
            + FAT +DG  +NG + EA+++F+ I     +  I  YN +I G CK G+         
Sbjct: 481 VYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLN 540

Query: 485 --------------------------LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
                                     + +A K+F ++      P+V+T +++I+  CK+ 
Sbjct: 541 KMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA 600

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            M +A  +   M++ + VP+ VT+ TL+ GF +  K  K   +   M
Sbjct: 601 DMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELM 647



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 224/501 (44%), Gaps = 26/501 (5%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M +M   P +T++  ++    K  +        ++    GL P+ F    L++  CK G 
Sbjct: 332 MAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGD 391

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L RI      P+ V++   I+G+   G I  A  + +K+      P+   +N 
Sbjct: 392 YVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNV 451

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++GLC+         L  EM++      +PDV  + +++DG  ++G +D+A ++   + 
Sbjct: 452 LMSGLCKNGRFPAMKLLLSEMLDRN---VQPDVYVFATLMDGFIRNGELDEAIKIFKVII 508

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + ++P ++ YN++I GFC      +A     +M +    PD  T++ +I+   K   M 
Sbjct: 509 RKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMS 568

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
              ++   M++    P+ +TY SL++GFC    + RA ++F  M S     +V +Y  L+
Sbjct: 569 SALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLV 628

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ-LNDV 430
               K  K E A  ++  ML     P+  T++ L++GL         ++  D M+    +
Sbjct: 629 GGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSL 688

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           + D FT       +   G+                +  I  YN +I  LCK G + TA  
Sbjct: 689 ILDFFTM------MLSEGW----------------DQVIAAYNSVIVCLCKHGMVDTAQL 726

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L  ++  KG + D V  + M+H LC +G+  +  +++     K  + + V +   L  ++
Sbjct: 727 LLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYL 786

Query: 551 QNNKKSKVVVLLHKMAAEKLV 571
              + S+  V+L  +  E  V
Sbjct: 787 YQGRLSEASVILQTLIEEDRV 807



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 153/340 (45%), Gaps = 18/340 (5%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+     P +  F  L+    +N + D  + +FK +   G+ P +   N +I   CK G 
Sbjct: 472 MLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGK 531

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + A   L ++      P+  T++ +I+G   +  +  A ++F ++      PNV+T+ +
Sbjct: 532 MTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTS 591

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LING C+  + + A K+F  M   F  +  P+VVTY +++ G  K G  +KA  +   M 
Sbjct: 592 LINGFCKKADMIRAEKVFRGM-KSFDLV--PNVVTYTTLVGGFFKAGKPEKATSIFELML 648

Query: 252 DRNINPNVITYNSLICGFCCV----------DDWKEAKCL----FIEMMDNGVQPDVVTF 297
                PN  T++ LI G              D  +  + L    F  M+  G    +  +
Sbjct: 649 MNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAY 708

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N++I   CK G +D    LL  M+ +G   D+V + +++ G C  G+    R +    ++
Sbjct: 709 NSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLN 768

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE-RIR 396
           K        Y++ ++      ++ +A  + + ++ E R+R
Sbjct: 769 KIELQTAVKYSLTLDKYLYQGRLSEASVILQTLIEEDRVR 808



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 95/186 (51%), Gaps = 5/186 (2%)

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTFATYIDGLCKNG 448
           M ++ ++P+   ++ L+    + G+L  AL+L   + ++++ +P      + ++GL K+G
Sbjct: 117 MKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSG 176

Query: 449 FVLEAVQVF----QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            V  A+Q++    Q        +   T + ++ GLC +G+++   +L      KG +P V
Sbjct: 177 KVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHV 236

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           V  + +I   CK+G +  A   L +++ K  +P+  T+  L+ GF +  +   V  LL +
Sbjct: 237 VFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTE 296

Query: 565 MAAEKL 570
           MAA  L
Sbjct: 297 MAARGL 302


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/570 (28%), Positives = 280/570 (49%), Gaps = 12/570 (2%)

Query: 36   LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTS--FTILLTMLAK 93
            ++S   K   S+     +R K  N+T +  V FFD ++      G     F +   +L +
Sbjct: 553  VASKDLKVAQSLISSFWERPKL-NVTES-FVQFFDLLVYTYKDWGSDPRVFDVFFQVLVE 610

Query: 94   NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK-MGITSGAFVVLGRILRSCFTPNTV 152
                     +F+++ + GL   +   N+ +  L K    T+ A +V           N  
Sbjct: 611  FGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVA 670

Query: 153  TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            ++N +I+ +C  GRI EA  L   + +    P+V++++T+ING CR        KL E+M
Sbjct: 671  SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730

Query: 213  VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
              +     KP+  TY SII  LC+   + +A+E   +M  + I P+ I Y +L+ GFC  
Sbjct: 731  KQKG---LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKR 787

Query: 273  DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
             D + A   F EM    + PDV+T+ A+I+  C+ G M +  +L   M+ RG+ PD +T+
Sbjct: 788  GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITF 847

Query: 333  NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
              LM+G+C  G I  A  +   M+  GC  +V +Y  LI+  CK+  ++ A  L  EM  
Sbjct: 848  TELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 907

Query: 393  ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
              ++P++ TYN++++GL + GN+ +A+KL+ + +   +  D+ T+ T +D  CK+G + +
Sbjct: 908  IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 967

Query: 453  AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
            A ++   +     +  I T+N L+NG C  G L+   KL + +  KG  P+  T + ++ 
Sbjct: 968  AQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVK 1027

Query: 513  WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
              C    +  A  +  DM ++   P   T+  L++G        +   L  +M  +   V
Sbjct: 1028 QYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSV 1087

Query: 573  SDLSLSSKVVDLLSKDKKY---RECLNQFR 599
            S +S  S ++    K KK+   RE  +Q R
Sbjct: 1088 S-VSTYSVLIKGFFKRKKFVEAREIFDQMR 1116



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 225/444 (50%), Gaps = 9/444 (2%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            NEA +    M     +P + S++ ++    +  + D V  L +++   GL P+ +    +
Sbjct: 686  NEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSI 745

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I  LC++   + A      ++     P+T+ +  L++G C  G I  A++ F +++    
Sbjct: 746  IGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDI 805

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGF 239
             P+V+T+  +I+G C+  + + A KLF EM      +C+   PD++T+  +++G CK G 
Sbjct: 806  TPDVLTYTAIISGFCQIGDMVEAGKLFHEM------LCRGLEPDIITFTELMNGYCKAGH 859

Query: 240  VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
            +  A  +   M     +PNV+TY +LI G C   D   A  L  EM   G+QP++ T+N+
Sbjct: 860  IKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 919

Query: 300  MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
            ++N  CK G +++  +L+      G+N DTVTY +LMD +C  G + +A+E+   M+ KG
Sbjct: 920  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979

Query: 360  CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
             +  + ++N+L+N  C    +ED   L   ML++ I P+  T+N L+       NL  A 
Sbjct: 980  LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAAT 1039

Query: 420  KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
             +   M    V PD  T+   + G C    + EA  +FQ ++     + + TY+ LI G 
Sbjct: 1040 AIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099

Query: 480  CKMGRLKTACKLFHRLQHKGPIPD 503
             K  +   A ++F +++  G   D
Sbjct: 1100 FKRKKFVEAREIFDQMRRDGLAAD 1123



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 197/379 (51%), Gaps = 3/379 (0%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            EA   F  MI     P    +T L+    K          F  ++S  + PD+     +I
Sbjct: 757  EAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 816

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
            +  C++G    A  +   +L     P+ +TF  L+NG C  G I +A R+   +    C 
Sbjct: 817  SGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCS 876

Query: 184  PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            PNVVT+ TLI+GLC+  +   A +L  EM   +    +P++ TYNSI++GLCK G +++A
Sbjct: 877  PNVVTYTTLIDGLCKEGDLDSANELLHEM---WKIGLQPNIFTYNSIVNGLCKSGNIEEA 933

Query: 244  KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +L+ + +   +N + +TY +L+  +C   +  +A+ +  EM+  G+QP +VTFN ++N 
Sbjct: 934  VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNG 993

Query: 304  NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             C  G ++   +LL  M+ +G+ P+  T+N L+  +C+   +  A  ++  M S+G   D
Sbjct: 994  FCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPD 1053

Query: 364  VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              +Y  L+  +C  + +++A  L++EM  +    SV TY+ L+ G F+     +A ++ D
Sbjct: 1054 GKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFD 1113

Query: 424  KMQLNDVVPDSFTFATYID 442
            +M+ + +  D   F  + D
Sbjct: 1114 QMRRDGLAADKEIFDFFSD 1132



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 167/361 (46%), Gaps = 34/361 (9%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            K G+I +  A  FF  M     +P + ++T +++   +         LF  +   GL PD
Sbjct: 786  KRGDIRA--ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPD 843

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +     L+N  CK G    AF V   ++++  +PN VT+  LI+GLC EG +  A  L  
Sbjct: 844  IITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 903

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF-------------------------- 209
            ++      PN+ T+N+++NGLC++ N   A+KL                           
Sbjct: 904  EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 963

Query: 210  -----EEMVNE-FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
                 +E++ E  G   +P +VT+N +++G C  G ++  ++LL  M  + I PN  T+N
Sbjct: 964  EMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 1023

Query: 264  SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
             L+  +C  ++ K A  ++ +M   GV+PD  T+  ++  +C    M +   L + M  +
Sbjct: 1024 CLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGK 1083

Query: 324  GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            G +    TY+ L+ GF    +   ARE+F  M   G   D   ++   +   K ++ +  
Sbjct: 1084 GFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTI 1143

Query: 384  V 384
            V
Sbjct: 1144 V 1144


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 236/494 (47%), Gaps = 18/494 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  ++  L +      + SL   +   GL P++ + N +I  LCK    S A  V
Sbjct: 344 PTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAV 403

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L +++ S F P+ VTFN LI   C EG + EA +L ++      +PN +++  LI+G C 
Sbjct: 404 LNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCV 463

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
               +VA  L  EM+   G    PDVVT  ++I GL   G VD+A  +  +M +R + P+
Sbjct: 464 RGEVMVASDLLVEMI---GRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPD 520

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              YN LI G C       AK L +EM++  VQPD   +  +I+   +  K+    ++ E
Sbjct: 521 ANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFE 580

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M ++G   D V YN+++ G+C  G ++ A     SM   GC  D ++Y  LI+   K  
Sbjct: 581 FMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKG 640

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            ++ A+    +M+  R +P+++TY +L+ G   +GN   A  L   MQ   + P+   + 
Sbjct: 641 DIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYT 700

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL--CKMGRLKTACK------ 490
             I  L K    ++A   F+ +    C     T + L+NGL  C+ G + + C       
Sbjct: 701 VLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAH 760

Query: 491 -------LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
                  +F  L   G  P +   + +I  LC+   + KA +L   M  K C+P  VTF 
Sbjct: 761 KKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFL 820

Query: 544 TLLRGFVQNNKKSK 557
           +LL GF    K  K
Sbjct: 821 SLLYGFSSVGKSGK 834



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/447 (31%), Positives = 225/447 (50%), Gaps = 4/447 (0%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           ++ GLC EGR+ E  RL +      C P  V +N LI+G CR  +    L L  EM  E 
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEM--EM 339

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
             I  P VVTY +II  L +   + K + LL +MK+R ++PNV  YN++I   C      
Sbjct: 340 KGIM-PTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSAS 398

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  +  +M+ +   PDVVTFN +I   C++G +++  +LL   I+R + P+ ++Y  L+
Sbjct: 399 QALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLI 458

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            GFC+ G +  A +L V M+ +G   DV +   LI+      +V++A+ +  +M   ++ 
Sbjct: 459 HGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVM 518

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P    YN L+SGL +   L  A  L+ +M    V PD F + T IDG  ++  + +A ++
Sbjct: 519 PDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKI 578

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F+ +        I  YN +I G CK G +  A      ++  G IPD  T +T+I    K
Sbjct: 579 FEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAK 638

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +G +  A   L DM  + C P+ VT+ +L+ G+          VL   M +E L  + + 
Sbjct: 639 KGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVH 698

Query: 577 LSSKVVDLLSKDKKYRECLNQFRHLLF 603
            +  +  L  KDK   +    F H+L 
Sbjct: 699 YTVLIGSLFKKDKAI-QAAAYFEHMLL 724



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 220/442 (49%), Gaps = 3/442 (0%)

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
             G  P     N+LI+  C+ G      ++LG +      P  VT+  +I+ L  +  + 
Sbjct: 304 GEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLT 363

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +   L  ++      PNV  +NT+I  LC+ R+   AL +  +MV    +   PDVVT+N
Sbjct: 364 KIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMV---ASRFDPDVVTFN 420

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++I   C++G V++A +LL +   R + PN ++Y  LI GFC   +   A  L +EM+  
Sbjct: 421 TLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGR 480

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G  PDVVT  A+I+     G++D+   + E M +R V PD   YN L+ G C    +S A
Sbjct: 481 GHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAA 540

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           + L V M+ +  + D + Y  LI+   +  K+ DA  ++  M  +     ++ YN ++ G
Sbjct: 541 KNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKG 600

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             + G + +A+  +  M+    +PD FT+ T IDG  K G +  A++    +   +C+  
Sbjct: 601 YCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPN 660

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           I TY  LI G C +G   +A  LF  +Q +G  P+VV  + +I  L K+ +  +A     
Sbjct: 661 IVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFE 720

Query: 529 DMEAKNCVPSEVTFCTLLRGFV 550
            M   +C P++ T   L+ G  
Sbjct: 721 HMLLNHCSPNDATMHYLVNGLT 742



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 234/506 (46%), Gaps = 18/506 (3%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP +  +  ++  L K +     +++  ++ ++   PD+   N LI   C+ G    A  
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L   +R    PN +++  LI+G C  G +M A+ L  ++      P+VVT   LI+GL 
Sbjct: 438 LLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLV 497

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            +     AL + E+M         PD   YN +I GLCK   +  AK LL++M ++ + P
Sbjct: 498 VSGQVDEALMVREKMAER---QVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQP 554

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +   Y +LI GF   D   +A+ +F  M + G   D+V +NAMI   CK G M++    +
Sbjct: 555 DKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCM 614

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + G  PD  TY +L+DG+   G I  A      M+ + C+ ++ +Y  LI   C  
Sbjct: 615 SSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNI 674

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
              + A  L+  M SE + P+V+ Y  L+  LF+      A    + M LN   P+  T 
Sbjct: 675 GNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATM 734

Query: 438 ATYIDGL--CKNGFV-------------LEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
              ++GL  C+ G +                + VF+ + +   + RI  YN +I  LC+ 
Sbjct: 735 HYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRH 794

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             L  A +L  ++ +KG +PD VT  ++++     G+  K    L +   ++       +
Sbjct: 795 NMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSALPNEFQQDEFEIICKY 854

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAE 568
            TLL   V +  + +V  +L   A E
Sbjct: 855 MTLLNQHVMSPVRDEVSRVLQLYAEE 880



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 211/446 (47%), Gaps = 5/446 (1%)

Query: 121 LLINCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           +++  LC  G +  G  ++  R    C  P  V +N LI+G C  G +     L  ++ +
Sbjct: 281 VMVRGLCLEGRVEEGRRLIEARWGEGC-VPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEM 339

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P VVT+  +I+ L R  +      L  EM  E G    P+V  YN++I  LCK   
Sbjct: 340 KGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEM-KERG--LSPNVQIYNTVIYALCKCRS 396

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
             +A  +L QM     +P+V+T+N+LI  FC   D +EA  L  E +   ++P+ +++  
Sbjct: 397 ASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTP 456

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  C  G++   + LL  MI RG  PD VT  +L+ G  + G++  A  +   M  + 
Sbjct: 457 LIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQ 516

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              D   YN+LI+  CK + +  A  L  EML ++++P    Y TL+ G  +   L DA 
Sbjct: 517 VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDAR 576

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           K+ + M+      D   +   I G CK+G + EAV    ++R   C     TY  LI+G 
Sbjct: 577 KIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGY 636

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
            K G +K A +    +  +   P++VT +++I   C  G  D A  L   M+++   P+ 
Sbjct: 637 AKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNV 696

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKM 565
           V +  L+    + +K  +       M
Sbjct: 697 VHYTVLIGSLFKKDKAIQAAAYFEHM 722



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 148/318 (46%), Gaps = 4/318 (1%)

Query: 275 WKEAKCLFIEMM--DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           W+ A+ L+ EM+  D     D  +   M+   C +G++++  RL+E     G  P  V Y
Sbjct: 255 WECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFY 314

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N L+DG+C  G + R   L   M  KG    V +Y  +I+   +   +     L  EM  
Sbjct: 315 NVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKE 374

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             + P+V  YNT++  L +  +   AL ++++M  +   PD  TF T I   C+ G V E
Sbjct: 375 RGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEE 434

Query: 453 AVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           A+++  +AIR  + E    +Y  LI+G C  G +  A  L   +  +G  PDVVT   +I
Sbjct: 435 ALKLLREAIRR-ELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALI 493

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           H L   GQ+D+A  +   M  +  +P    +  L+ G  +    S    LL +M  +K+ 
Sbjct: 494 HGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQ 553

Query: 572 VSDLSLSSKVVDLLSKDK 589
                 ++ +   +  DK
Sbjct: 554 PDKFVYTTLIDGFIRSDK 571



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 129/293 (44%), Gaps = 18/293 (6%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++ K  P    +T L+    ++ +      +F+ +   G + D+   N +I   CK G+
Sbjct: 547 MLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGM 606

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + A + +  + +    P+  T+  LI+G   +G I  A R    +    C PN+VT+ +
Sbjct: 607 MNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYAS 666

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI G C   NT  A  LF  M +E      P+VV Y  +I  L K     +A      M 
Sbjct: 667 LICGYCNIGNTDSAEVLFASMQSEG---LFPNVVHYTVLIGSLFKKDKAIQAAAYFEHML 723

Query: 252 DRNINPNVITYNSLICGF-----------CCVDDWKEAKC----LFIEMMDNGVQPDVVT 296
             + +PN  T + L+ G            C   D    K     +F  ++ +G+ P +  
Sbjct: 724 LNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISA 783

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           +NA+I   C+   + K   L E M  +G  PD VT+ SL+ GF  VG+  + R
Sbjct: 784 YNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWR 836


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/530 (27%), Positives = 258/530 (48%), Gaps = 13/530 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F+ M + +  P   ++  ++       ++D   SL +R  + G  P +   N +
Sbjct: 183 DEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCI 242

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + CL K G T  A  +   + R    PN  T+N +I  LC  G +  A ++   +     
Sbjct: 243 LTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGL 301

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV T N +I+ LC+ +    A  +FE M  +   +C PD  T+ S+IDGL K G VD 
Sbjct: 302 FPNVRTINIMIDRLCKAQKLDEACSIFEGMDYK---VCSPDGATFCSLIDGLGKQGRVDD 358

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +  +M D +  PNV+ Y SLI  F   D  ++   ++ EMM +G  PD++  N  ++
Sbjct: 359 AYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMD 418

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G+ +K   L E +  RG  PDT +Y+ L+      G      EL+ +M  +GC  
Sbjct: 419 CVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVL 478

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +YN +I+  CK  KV  A  L  EM +    P+V+TY +++ GL ++  L +A  L 
Sbjct: 479 DTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLF 538

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++ + N +  +   +++ IDG  K G V EA  V + +        + T+NCL++GL K 
Sbjct: 539 EEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKA 598

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             +  A   F  ++     P+ +T   +I+ LCK  + +KA     +M+ +   P+ +T+
Sbjct: 599 EEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITY 658

Query: 543 CTLLRGFVQNNKKSKVVVLLHKM---------AAEKLVVSDLSLSSKVVD 583
             ++ G  ++   ++   L  +          A+   ++  LS++++ +D
Sbjct: 659 TAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALD 708



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 262/540 (48%), Gaps = 5/540 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S+  +  F+ M ++     +   T L+ + ++  + D  +SL   + SN    D+ + N+
Sbjct: 77  SDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNV 136

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            I+C  K+G    A+     +  +   P+ VT+  ++  LC   R+ EA  +F+++    
Sbjct: 137 CIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNR 196

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P    +NT+I G         A  L E    +    C P VV YN I+  L K G  D
Sbjct: 197 QVPCAYAYNTMIMGYGSAGKFDEAYSLLE---RQRAKGCIPSVVAYNCILTCLGKKGKTD 253

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA  +  +MK R+  PN+ TYN +I   C   + + A  +   M + G+ P+V T N MI
Sbjct: 254 KALRIFEEMK-RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMI 312

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK  K+D+   + E M  +  +PD  T+ SL+DG    GR+  A  ++  M+     
Sbjct: 313 DRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQI 372

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +V  Y  LI    K  + ED   +Y+EM+     P ++  NT +  +F+ G       L
Sbjct: 373 PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRAL 432

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            ++++    +PD+ +++  I  L K GF  E  +++ A+++  C L    YN +I+G CK
Sbjct: 433 FEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCK 492

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G++  A +L   ++  G  P VVT  +++  L K  ++D+A  L  + ++     ++V 
Sbjct: 493 SGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVI 552

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + +L+ GF +  +  +  +++ +M  +K +  ++   + ++D L K ++  E L  F+ +
Sbjct: 553 YSSLIDGFGKVGRVDEAYLVMEEM-MQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSM 611



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 226/466 (48%), Gaps = 34/466 (7%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN+ +  A    D M +    P + +  I++  L K ++ D   S+F+ ++     PD
Sbjct: 282 KAGNVEA--AFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPD 339

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 LI+ L K G    A+ +  R+L +   PN V +  LI       R  +  +++K
Sbjct: 340 GATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYK 399

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM--------VNEFGAI-------- 219
           ++    C P+++  NT ++ + +   T     LFEE+           +  +        
Sbjct: 400 EMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAG 459

Query: 220 ----------------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
                           C  D   YN++IDG CK G V+KA +LL +MK    +P V+TY 
Sbjct: 460 FARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYG 519

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S++ G   +D   EA  LF E   NG++ + V ++++I+   K G++D+   ++E M+Q+
Sbjct: 520 SVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQK 579

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P+  T+N L+DG      I+ A   F SM    C  +  +Y ILIN  CK +K   A
Sbjct: 580 GLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKA 639

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
              ++EM  + ++P+ ITY  ++SGL + GN+  A  L ++ + +  +PDS ++   I+G
Sbjct: 640 FVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEG 699

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           L      L+A Q+F+  R   C +  +T   L++ L K   L+ A 
Sbjct: 700 LSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQAA 745



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 248/554 (44%), Gaps = 50/554 (9%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + + +    K  + D     F  + +NGL PD      ++  LCK      A  +  ++ 
Sbjct: 134 YNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQME 193

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           ++   P    +N +I G  + G+  EA  L ++     C P+VV +N ++  L +   T 
Sbjct: 194 QNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTD 253

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            AL++FEEM  +      P++ TYN II  LCK G V+ A ++   MK+  + PNV T N
Sbjct: 254 KALRIFEEMKRD----AMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTIN 309

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGV-QPDVVTFNAMINYNCKDGKMDKVNRLLELMI- 321
            +I   C      EA C   E MD  V  PD  TF ++I+   K G++D   R+ E M+ 
Sbjct: 310 IMIDRLCKAQKLDEA-CSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLD 368

Query: 322 ----------------------------------QRGVNPDTVTYNSLMDGFCLVGRISR 347
                                             + G +PD +  N+ MD     G   +
Sbjct: 369 ADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEK 428

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
            R LF  + ++G   D  SY+ILI++  K     +   LY  M  +        YNT++ 
Sbjct: 429 GRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVID 488

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G  + G +  A +L+++M+     P   T+ + +DGL K   + EA  +F+  ++   EL
Sbjct: 489 GFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIEL 548

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
               Y+ LI+G  K+GR+  A  +   +  KG  P+V T + ++  L K  ++++A    
Sbjct: 549 NQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCF 608

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL---------VVSDLSLS 578
             M+   C P+++T+C L+ G  +  K +K  V   +M  + L         ++S L+ S
Sbjct: 609 QSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKS 668

Query: 579 SKVVDLLSKDKKYR 592
             V    S  +++R
Sbjct: 669 GNVAQASSLFERFR 682



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/542 (24%), Positives = 231/542 (42%), Gaps = 34/542 (6%)

Query: 91  LAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
           + + + +D +  +   ++  G  P  +    L+    K      AF +L  +    F P 
Sbjct: 1   MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
              +  LI  L   G       LF ++     + NV    TLI    R      AL L +
Sbjct: 61  FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120

Query: 211 EM---------------VNEFGAICK-----------------PDVVTYNSIIDGLCKDG 238
           EM               ++ FG + K                 PD VTY S++  LCK  
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +D+A E+  QM+     P    YN++I G+     + EA  L       G  P VV +N
Sbjct: 181 RLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYN 240

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            ++    K GK DK  R+ E M +R   P+  TYN ++   C  G +  A ++  +M   
Sbjct: 241 CILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEA 299

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   +V + NI+I+  CK QK+++A  ++  M  +   P   T+ +L+ GL + G + DA
Sbjct: 300 GLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDA 359

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            ++ ++M   D +P+   + + I    K     +  ++++ +    C   +   N  ++ 
Sbjct: 360 YRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDC 419

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           + K G  +    LF  ++ +G +PD  + S +IH L K G   +  +L   M+ + CV  
Sbjct: 420 VFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLD 479

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
              + T++ GF ++ K +K   LL +M       + ++  S VVD L+K  +  E    F
Sbjct: 480 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGS-VVDGLAKIDRLDEAYMLF 538

Query: 599 RH 600
             
Sbjct: 539 EE 540



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 194/420 (46%), Gaps = 5/420 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG +    ++   K G +  ++A   ++ M+     P +  +T L+    K  + +    
Sbjct: 339 DGATFCSLIDGLGKQGRV--DDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHK 396

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           ++K +  +G  PDL +LN  ++C+ K G T     +   I    F P+T +++ LI+ L 
Sbjct: 397 MYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLV 456

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G   E   L+  +    C  +   +NT+I+G C++     A +L EEM    G    P
Sbjct: 457 KAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM-KTMGH--HP 513

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            VVTY S++DGL K   +D+A  L  + K   I  N + Y+SLI GF  V    EA  + 
Sbjct: 514 TVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVM 573

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EMM  G+ P+V T+N +++   K  ++++     + M      P+ +TY  L++G C V
Sbjct: 574 EEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKV 633

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            + ++A   +  M  +G + +  +Y  +I+   K   V  A  L+    +    P   +Y
Sbjct: 634 RKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASY 693

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N ++ GL       DA +L ++ +L      + T    +D L K   + +A  V   +R 
Sbjct: 694 NAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQAAIVGAVLRE 753


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 243/483 (50%), Gaps = 7/483 (1%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D    +F  +    + PD     L++   C+MG  S     L  ++   +  +  T   +
Sbjct: 210 DYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLM 269

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           I+    +G +  A   FKK      +PN++ F++LINGLC+  +   A ++ EEMV +  
Sbjct: 270 ISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG- 328

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLICGFCCVDDWK 276
              KP+V T+ ++IDGLCK G+ +KA  L L++ +  N  PNV TY  +I G+C  +   
Sbjct: 329 --WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLN 386

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
            A+ L I M + G+ P+  T+  +I+ +CK G   +   L++LM + G  P+  TYN+++
Sbjct: 387 RAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAII 446

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           DG C  GR   A +L    +  G   D  +Y ILI+  C+    + A+ ++  M    ++
Sbjct: 447 DGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQ 506

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P + TYN L++   +   + ++ KL ++     ++P   T+ + I G C++G +  A++ 
Sbjct: 507 PDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKF 566

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F  +R+  C+    TY  LI+GLC   +L  AC+L+  +   G  P  VT  T+ +  CK
Sbjct: 567 FHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCK 626

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +G    A  +L  +E K  +    T  TL+R      K     +  HK+  + L V  ++
Sbjct: 627 QGDSATAMIILERLEKKLWIR---TVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRIT 683

Query: 577 LSS 579
           L++
Sbjct: 684 LAA 686



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 247/501 (49%), Gaps = 11/501 (2%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD M+     P  TS+ +++    +  +   V    K +   G   D     L+I+   +
Sbjct: 216 FDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSE 275

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G  + AF    + ++    PN + F+ LINGLC  G I +A  + +++      PNV T
Sbjct: 276 KGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYT 335

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
              LI+GLC+   T  A +LF ++V       KP+V TY  +I+G CK+  +++A+ LL+
Sbjct: 336 HTALIDGLCKKGWTEKAFRLFLKLVRSDNY--KPNVYTYTCMINGYCKEEKLNRAEMLLI 393

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK++ + PN  TY  LI G C   ++  A  L   M   G  P++ T+NA+I+  CK G
Sbjct: 394 RMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKG 453

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +  +  +LL   ++ G++ D VTY  L+  FC      +A  +F  M   G + D+++YN
Sbjct: 454 RFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYN 513

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           +LI   C+ +KVE++  L+ E +   + P+  TY +++ G  + G++  A+K   KM+  
Sbjct: 514 VLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDY 573

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN---CKCELRIETYNCLINGLCKMGRL 485
              PDS T+   I GLC    + EA Q+++ + +     CE+   T   L    CK G  
Sbjct: 574 GCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEV---TRVTLAYEYCKQGDS 630

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
            TA  +  RL+ K  I    T +T+I  LC E ++  A      +  K+     +T    
Sbjct: 631 ATAMIILERLEKKLWIR---TVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAF 687

Query: 546 LRGFVQNNKKSKVVVLLHKMA 566
                ++NK + V  L  +++
Sbjct: 688 TTACYESNKFALVSDLSERIS 708



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 195/399 (48%), Gaps = 43/399 (10%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A+ +  EM N  G + K  ++  N +ID     GFVD A+++  +M DR + P+  +Y  
Sbjct: 177 AVNMVIEMQNH-GLVLKARIL--NFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKL 233

Query: 265 LICGFCC------VDDW-----------------------------KEAKCLFIEMMDNG 289
           ++ G+C       VD W                               A   F + +  G
Sbjct: 234 MVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMG 293

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           + P+++ F+++IN  CK G + +   +LE M+++G  P+  T+ +L+DG C  G   +A 
Sbjct: 294 LNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAF 353

Query: 350 ELFVSMV-SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            LF+ +V S   + +VY+Y  +IN  CK++K+  A  L   M  + + P+  TY  L+ G
Sbjct: 354 RLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDG 413

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             + GN G A +L+D M      P+ FT+   IDGLCK G   EA ++ +  R  K  L 
Sbjct: 414 HCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR--RGLKSGLH 471

Query: 469 IE--TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
            +  TY  LI+  C+    K A  +F R+   G  PD+ T + +I   C++ +++++  L
Sbjct: 472 ADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKL 531

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             +      +P++ T+ +++ G+ ++   S  +   HKM
Sbjct: 532 FEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKM 570



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 157/301 (52%), Gaps = 1/301 (0%)

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           ++  F  +   KEA  + IEM ++G+       N +I+     G +D   ++ + M+ R 
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           V PD+ +Y  ++ G+C +GRIS        M+ +G   D  +  ++I+   +   V  A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
             +++ +   + P++I +++L++GL ++G++  A +++++M      P+ +T    IDGL
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 445 CKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           CK G+  +A ++F + +R+   +  + TY C+ING CK  +L  A  L  R++ +G +P+
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
             T + +I   CK G   +A +L+  M  +   P+  T+  ++ G  +  +  +   LL 
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 564 K 564
           +
Sbjct: 464 R 464



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 9/282 (3%)

Query: 51  LNDRH-KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           L D H K+GN     A    D M K   +P + ++  ++  L K  ++     L +R   
Sbjct: 410 LIDGHCKAGNF--GRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLK 467

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           +GL  D     +LI+  C+      A  +  R+ +    P+  T+N LI   C + ++ E
Sbjct: 468 SGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEE 527

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           + +LF++       P   T+ ++I G CR  +   A+K F +M  ++G  CKPD +TY +
Sbjct: 528 SEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKM-RDYG--CKPDSITYGA 584

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I GLC +  +D+A +L   M D  ++P  +T  +L   +C   D   A  + +E ++  
Sbjct: 585 LISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATA-MIILERLEKK 643

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
           +   + T N +I   C + K+         ++ + +N D +T
Sbjct: 644 LW--IRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRIT 683



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 71/232 (30%)

Query: 411 QVGNLGDALKLIDKMQ----------LN-------------------------DVVPDSF 435
           ++G L +A+ ++ +MQ          LN                          VVPDS 
Sbjct: 170 EIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDST 229

Query: 436 TFATYIDGLCKNG-------FVLEAVQVFQAIRNCKCELRIET----------------- 471
           ++   + G C+ G       ++ + ++   A+ N  C L I T                 
Sbjct: 230 SYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKW 289

Query: 472 -----------YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                      ++ LINGLCK+G +K A ++   +  KG  P+V T + +I  LCK+G  
Sbjct: 290 VQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWT 349

Query: 521 DKANDLLLDM-EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           +KA  L L +  + N  P+  T+  ++ G+ +  K ++  +LL +M  + LV
Sbjct: 350 EKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLV 401


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 231/440 (52%), Gaps = 3/440 (0%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P+    ++LI+ LC+ G    AF +   ++     P+T T+  LI   C  G   +A ++
Sbjct: 197 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 256

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             ++   AC PNV T+  LI+ LCR      A  +F +M+     +C P ++T+N++I+G
Sbjct: 257 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH--GLC-PGIITFNALING 313

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            CK+G+V  A +LL  M+  N  PN+ TYN L+ G C V    +A  L   ++DNG+ PD
Sbjct: 314 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 373

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            VT+N +++  CK+G+++    +   M   G+ PD  T+ +L+DG C +GR+ +A  +  
Sbjct: 374 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 433

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
           SMV KG   D  ++  LI+ +CK  K +D   L+  M+  R   +  T+N  L  L +  
Sbjct: 434 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 493

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L +A  ++ KM    +VP   T    I+G C+ G    ++++ + ++   C   + TY 
Sbjct: 494 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 553

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +INGLC  GR++ A  +   +   G  P+  T + ++    K G++D+A  ++  M   
Sbjct: 554 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 613

Query: 534 NCVPSEVTFCTLLRGFVQNN 553
            C P+   +  LL GFV +N
Sbjct: 614 GCQPNSHIYSALLSGFVLSN 633



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 240/485 (49%), Gaps = 4/485 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           ++ LL  LAK         +++R+ + G          ++N LCK G    A +   ++L
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN-VFACDPNVVTFNTLINGLCRTRNT 202
           R  F  +T     L+   C    + EA R+F+K++   +C PN VT++ LI+GLC     
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A +L +EMV +    C+P   TY  +I   C  G  DKA ++L +M  +   PNV TY
Sbjct: 216 EEAFQLKQEMVEKG---CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 272

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             LI   C     +EA  +F +M+ +G+ P ++TFNA+IN  CK+G +    +LL +M +
Sbjct: 273 TILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK 332

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
               P+  TYN LM+G C V +  +A  L   +V  G   D  +YNIL++  CK+ ++  
Sbjct: 333 GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM 392

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  ++  M S  + P   T+  L+ GL ++G L  A  ++  M    +  D  TF   ID
Sbjct: 393 AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALID 452

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G CK G   +   +F+ +   +C     T+NC ++ L K  +L  A  +  ++   G +P
Sbjct: 453 GHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVP 512

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
            VVT + +I   C+ G+   +  +L  M+   C P+  T+  ++ G   N +  +   +L
Sbjct: 513 SVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 572

Query: 563 HKMAA 567
             M++
Sbjct: 573 FSMSS 577



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 231/442 (52%), Gaps = 4/442 (0%)

Query: 63  NEAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            EA   F+ M K +   P   +++IL+  L +  + +    L + +   G  P      +
Sbjct: 180 GEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTV 239

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI   C +G+T  A  +L  +      PN  T+  LI+ LC EG+I EA  +F+K+    
Sbjct: 240 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 299

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P ++TFN LING C+    + A +L   M  E G  CKP++ TYN +++GLC+     
Sbjct: 300 LCPGIITFNALINGYCKEGWVVSAFQLLSVM--EKGN-CKPNIRTYNELMEGLCRVSKSY 356

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA  LL ++ D  + P+ +TYN L+ GFC       A  +F  M   G++PD  TF A+I
Sbjct: 357 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALI 416

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK G++++ N +L  M+++G++ D VT+ +L+DG C +G+      LF +MV   C 
Sbjct: 417 DGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 476

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
              +++N  ++A  KD K+ +A  +  +M+   + PSV+T+  L+ G  + G    +LK+
Sbjct: 477 TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 536

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +++M+     P+ +T+   I+GLC NG V EA  +  ++ +        TY  L+    K
Sbjct: 537 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 596

Query: 482 MGRLKTACKLFHRLQHKGPIPD 503
            GRL  A ++   +   G  P+
Sbjct: 597 AGRLDRAFQIVSTMVKNGCQPN 618



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 265/564 (46%), Gaps = 40/564 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++A+   D M      P + ++TIL+  L +  + +    +F+++  +GL P +   N 
Sbjct: 250 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 309

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LIN  CK G    AF +L  + +    PN  T+N L+ GLC   +  +A  L +++    
Sbjct: 310 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 369

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ VT+N L++G C+     +A  +F  M N  G   +PD  T+ ++IDGLCK G ++
Sbjct: 370 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSM-NSAGL--EPDGFTFTALIDGLCKLGRLE 426

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  +L  M  + I+ + +T+ +LI G C +   K+   LF  M++N       TFN  +
Sbjct: 427 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 486

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   KD K+++ N +L  M++ G+ P  VT+  L++G C  G  + + ++   M   GC 
Sbjct: 487 DALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 546

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +VY+Y I+IN  C + +VE+A  +   M S  + P+  TY  L+    + G L  A ++
Sbjct: 547 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQI 606

Query: 422 IDKMQLNDVVPDSFTFATYIDGL-------------------------------CKNGFV 450
           +  M  N   P+S  ++  + G                                C +  V
Sbjct: 607 VSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHV 666

Query: 451 LEAVQVFQA--IRN--CKCELRIET-YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
              + V  A  IR+   KC +  E  YN L+ GLCK GR+  A +L   +   G  PD  
Sbjct: 667 FRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 726

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             S + H+ CK  + D   + +  +     VPS  ++C ++ G     +  +   L+  +
Sbjct: 727 ISSIIEHY-CKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 785

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDK 589
                +  ++ ++  +  L+ +++
Sbjct: 786 VRHTGIEEEVEVTPSIEFLMKEEE 809



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 207/455 (45%), Gaps = 43/455 (9%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF--KKLNV 179
           L+ CL K+ +   AF+V  R++   F    + +  ++N LC  G  ++AA +F  K L +
Sbjct: 99  LLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNG-FVQAAEMFCCKVLRL 157

Query: 180 -FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
            F  D +V T   L N  CR  +   A ++FE+M                          
Sbjct: 158 GFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKM-------------------------- 189

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
                       K+ +  PN +TY+ LI G C     +EA  L  EM++ G QP   T+ 
Sbjct: 190 -----------SKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 238

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I   C  G  DK  ++L+ M  +   P+  TY  L+D  C  G+I  A  +F  M+  
Sbjct: 239 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G    + ++N LIN  CK+  V  A  L   M     +P++ TYN L+ GL +V     A
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 358

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L+ ++  N ++PD  T+   +DG CK G +  A  +F ++ +   E    T+  LI+G
Sbjct: 359 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 418

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LCK+GRL+ A  +   +  KG   D VT + +I   CK G+      L  +M    C+ +
Sbjct: 419 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 478

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
             TF   L    ++ K ++   +L KM    LV S
Sbjct: 479 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 513



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 183/392 (46%), Gaps = 39/392 (9%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           ++TL+  L +     VA  ++  MVNE   +   D   Y ++++ LCK+GFV  A+    
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGID---YRTVVNALCKNGFVQAAEM--- 149

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
                               FCC            +++  G   D     +++  NC+  
Sbjct: 150 --------------------FCC------------KVLRLGFGLDTHVCTSLVLANCRRD 177

Query: 309 KMDKVNRLLELMI-QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            + +  R+ E M  +    P++VTY+ L+ G C  GR+  A +L   MV KGC+    +Y
Sbjct: 178 DLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTY 237

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
            +LI A C     + A+ +  EM ++   P+V TY  L+  L + G + +A  +  KM  
Sbjct: 238 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 297

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + + P   TF   I+G CK G+V+ A Q+   +    C+  I TYN L+ GLC++ +   
Sbjct: 298 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 357

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  L  R+   G +PD VT + ++   CKEGQ++ A ++   M +    P   TF  L+ 
Sbjct: 358 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 417

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           G  +  +  +   +L  M  + + + +++ ++
Sbjct: 418 GLCKLGRLEQANGILGSMVKKGISLDEVTFTA 449



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 216/445 (48%), Gaps = 7/445 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++ IL+    K  Q +   ++F  +NS GL PD F    LI+ LCK+G    A  +
Sbjct: 372 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 431

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           LG +++   + + VTF  LI+G C  G+  +   LF+ +    C     TFN  ++ L +
Sbjct: 432 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 491

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +  +M+ ++G +  P VVT+  +I+G C+ G    + ++L +MK    +PN
Sbjct: 492 DYKLNEANAMLGKMM-KYGLV--PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 548

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TY  +I G C     +EA+ +   M   GV P+  T+  ++  + K G++D+  +++ 
Sbjct: 549 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 608

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS--MVSKGCRHDVYSYNILINANCK 376
            M++ G  P++  Y++L+ GF L      AR L  +  + ++    +    N L +   +
Sbjct: 609 TMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFR 668

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
              V+ A+ + R+ + +   P+   YN L+ GL + G + +A +L   M  + + PD   
Sbjct: 669 LMDVDHALKI-RDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-A 726

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
            ++ I+  CK       ++  + + + K      +Y  +I+GL   GR++ A KL   L 
Sbjct: 727 ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 786

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMD 521
               I + V  +  I +L KE + D
Sbjct: 787 RHTGIEEEVEVTPSIEFLMKEEEDD 811



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 8/211 (3%)

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND-VVPDSFTFATYIDGLCKNGFVLEAV 454
           R S   Y+TLL  L ++ N+G    L+ +  +N+  V     + T ++ LCKNGFV +A 
Sbjct: 90  RLSYPCYSTLLMCLAKL-NMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFV-QAA 147

Query: 455 QVFQAIRNCKCELRIETYNC--LINGLCKMGRLKTACKLFHRL-QHKGPIPDVVTCSTMI 511
           ++F   +  +    ++T+ C  L+   C+   L  A ++F ++ + +   P+ VT S +I
Sbjct: 148 EMF-CCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILI 206

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           H LC+ G++++A  L  +M  K C PS  T+  L++         K + +L +MA  K  
Sbjct: 207 HGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT-KAC 265

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           V ++   + ++D L ++ K  E    FR +L
Sbjct: 266 VPNVHTYTILIDRLCREGKIEEANGVFRKML 296


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/381 (34%), Positives = 210/381 (55%), Gaps = 17/381 (4%)

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P+V+T+  LI   C       A+KL +EM +     CKPDVVTYN +++G+CK+G +D
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRG---CKPDVVTYNVLVNGMCKEGRLD 68

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A + L  M      PNVIT+N ++   C    W +A+ L  EM+  G  P VVTFN +I
Sbjct: 69  EAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILI 128

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N+ C+ G + +   +LE M   G  P++++YN L+ GFC   ++ RA +    MVS+GC 
Sbjct: 129 NFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCY 188

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+ +YN ++ A CKD KV+ AV L  ++ S+   P +ITYNT++ GL +VG    A++L
Sbjct: 189 PDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVEL 248

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           + +M+   + PD  T+++ I GL + G V EA++ F  +     +    TYN ++ GLCK
Sbjct: 249 LHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCK 308

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             +   A      +  KG  P  V+ + +I  +  EG   +A +LL ++           
Sbjct: 309 AQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL----------- 357

Query: 542 FCTLLRGFVQNNKKSKVVVLL 562
            C+  RG V+ +   +VVV L
Sbjct: 358 -CS--RGVVKKSSAEQVVVRL 375



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 194/352 (55%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C PDV+TY  +I+  C +  V +A +LL +M  R   P+V+TYN L+ G C      EA 
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
                M   G QP+V+T N ++   C  G+     +LL  M+++G +P  VT+N L++  
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  G + RA ++   M + GC  +  SYN L++  CK++K++ A+     M+S    P +
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TYNT+L+ L + G +  A++L++++      P   T+ T IDGL K G   +AV++   
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHE 251

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +R    +  + TY+ LI GL + G+++ A K FH ++  G  P+  T ++++  LCK  Q
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQ 311

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            D+A D L  M +K C P+EV++  L+ G        + + LL+++ +  +V
Sbjct: 312 TDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 201/364 (55%), Gaps = 3/364 (0%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VL R L     P+ +T+  LI   CAE  + +A +L  ++    C P+VVT+N L+NG+C
Sbjct: 3   VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +      A+K    M + +G+  +P+V+T+N I+  +C  G    A++LL +M  +  +P
Sbjct: 63  KEGRLDEAIKFLNSMPS-YGS--QPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSP 119

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +V+T+N LI   C       A  +  +M  +G  P+ +++N +++  CK+ KMD+  + L
Sbjct: 120 SVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL 179

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E+M+ RG  PD VTYN+++   C  G++  A EL   + SKGC   + +YN +I+   K 
Sbjct: 180 EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 239

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            K + AV L  EM  + ++P VITY++L++GL + G + +A+K    ++   V P++FT+
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTY 299

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            + + GLCK      A+     + +  C+    +Y  LI G+   G  K A +L + L  
Sbjct: 300 NSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCS 359

Query: 498 KGPI 501
           +G +
Sbjct: 360 RGVV 363



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 179/333 (53%), Gaps = 3/333 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+   D M      P + ++ +L+  + K  + D  +     + S G  P++   N++
Sbjct: 33  GQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNII 92

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  +C  G    A  +L  ++R   +P+ VTFN LIN LC +G +  A  + +K+    C
Sbjct: 93  LRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGC 152

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +++N L++G C+ +    A++  E MV+     C PD+VTYN+++  LCKDG VD 
Sbjct: 153 TPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG---CYPDIVTYNTMLTALCKDGKVDA 209

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ELL Q+  +  +P +ITYN++I G   V    +A  L  EM   G++PDV+T++++I 
Sbjct: 210 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIA 269

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              ++GK+++  +    +   GV P+  TYNS+M G C   +  RA +    M+SKGC+ 
Sbjct: 270 GLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKP 329

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
              SY ILI     +   ++A+ L  E+ S  +
Sbjct: 330 TEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 184/356 (51%), Gaps = 3/356 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++TIL+            + L   + S G  PD+   N+L+N +CK G    A   
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +      PN +T N ++  +C+ GR M+A +L  ++    C P+VVTFN LIN LCR
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+ + E+M       C P+ ++YN ++ G CK+  +D+A + L  M  R   P+
Sbjct: 134 KGLLGRAIDILEKMPTHG---CTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPD 190

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           ++TYN+++   C       A  L  ++   G  P ++T+N +I+   K GK D+   LL 
Sbjct: 191 IVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLH 250

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M  +G+ PD +TY+SL+ G    G++  A + F  +   G + + ++YN ++   CK Q
Sbjct: 251 EMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQ 310

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           + + A+     M+S+  +P+ ++Y  L+ G+   G   +AL+L++++    VV  S
Sbjct: 311 QTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKS 366



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 163/310 (52%), Gaps = 5/310 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K G +  +EA+ F + M      P + +  I+L  +    ++     L   +  
Sbjct: 57  LVNGMCKEGRL--DEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVR 114

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G  P +   N+LIN LC+ G+   A  +L ++     TPN++++N L++G C E ++  
Sbjct: 115 KGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDR 174

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A +  + +    C P++VT+NT++  LC+      A++L  ++ ++    C P ++TYN+
Sbjct: 175 AIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG---CSPVLITYNT 231

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +IDGL K G  D+A ELL +M+ + + P+VITY+SLI G       +EA   F ++   G
Sbjct: 232 VIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG 291

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           V+P+  T+N+++   CK  + D+    L  MI +G  P  V+Y  L++G    G    A 
Sbjct: 292 VKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEAL 351

Query: 350 ELFVSMVSKG 359
           EL   + S+G
Sbjct: 352 ELLNELCSRG 361



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 79/158 (50%)

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           ++++D+    +  PD  T+   I+  C    V +A+++   + +  C+  + TYN L+NG
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           +CK GRL  A K  + +   G  P+V+T + ++  +C  G+   A  LL +M  K C PS
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            VTF  L+    +     + + +L KM       + LS
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLS 158


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 248/513 (48%), Gaps = 32/513 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E +  F  M +    P + ++T+++  L ++ +    ++LF  +   G  P++    ++
Sbjct: 56  DEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVM 115

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN +CK         +L  ++     P+  T+N LI+G C EG +  A  +   ++  +C
Sbjct: 116 INAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSC 175

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +PN  T+N LI G CR +N   A+ L  +M+    +   P VVTYNS+I G CK G++D 
Sbjct: 176 NPNERTYNELICGFCRKKNVHRAMALLSKMLE---SRLTPSVVTYNSLIHGQCKIGYLDS 232

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL  M +  + P+  TY+  I   C     +EA  LF  + + G++ + V + A+I+
Sbjct: 233 AYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALID 292

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK GKMD  N LL+ M+     P++ TYN+L+DG C   ++  A  L  SM+ KG + 
Sbjct: 293 GYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKC 352

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V +Y ILI A  K+   + A  +  +M+S   +P V  Y   +      GN+ +A  ++
Sbjct: 353 TVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMM 412

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN----- 477
             M    V+PD+ T+   ID     G +  A  V + + +  C+    TY+CLI      
Sbjct: 413 SMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKE 472

Query: 478 ---------GLC---------------KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
                     LC               KM + +TA +LF ++   G  P++ T + +I  
Sbjct: 473 ELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIG 532

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           LCK G++  A  L   M  +   PSE  + +LL
Sbjct: 533 LCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL 565



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 225/437 (51%), Gaps = 12/437 (2%)

Query: 122 LINCLCKMG---------ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
           ++N  CK+G           + AF V   + +     N V++  LI+GLC  GR+ E   
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           +FKK+    C P V T+  +++ L  +   + A+ LF EM  E G  C+P++ TY  +I+
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM-RERG--CEPNIHTYTVMIN 117

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
            +CK+  +++ + +L +M ++ + P+V TYN+LI G+C     + A+ +   M  N   P
Sbjct: 118 AMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNP 177

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +  T+N +I   C+   + +   LL  M++  + P  VTYNSL+ G C +G +  A  L 
Sbjct: 178 NERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLL 237

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M   G   D ++Y++ I+  CK  ++E+A  L+  +  + I+ + + Y  L+ G  + 
Sbjct: 238 NLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKA 297

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G + DA  L+D+M   D +P+S T+   IDGLCK   V EA+ + +++     +  + TY
Sbjct: 298 GKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTY 357

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
             LI  + K G    A ++  ++   G  PDV   +  IH  C  G + +A D++  M  
Sbjct: 358 TILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE 417

Query: 533 KNCVPSEVTFCTLLRGF 549
           +  +P  +T+  ++  +
Sbjct: 418 RGVMPDALTYTLVIDAY 434



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 199/386 (51%), Gaps = 43/386 (11%)

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAI-------CKPDVVTYNSIIDGLCKDGFVDKAK 244
           ++NG C+  N LV   L  ++ + F          C+ + V+Y ++I GLC+ G VD+  
Sbjct: 1   MVNGYCKLGN-LVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGI 59

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            +  +M++ +  P V TY  ++          EA  LF EM + G +P++ T+  MIN  
Sbjct: 60  NIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAM 119

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK+ K+++  R+L+ M+++G+ P   TYN+L+DG+C  G +  A+E+   M S  C  + 
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN LI   C+ + V  A+ L  +ML  R+ PSV+TYN+L+ G  ++G L  A +L++ 
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  N VVPD +T                                   Y+  I+ LCK GR
Sbjct: 240 MNENGVVPDQWT-----------------------------------YSVFIDTLCKKGR 264

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           ++ A  LF+ L+ KG   + V  + +I   CK G+MD AN LL  M  ++C+P+  T+  
Sbjct: 265 IEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNA 324

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKL 570
           L+ G  +  K  + ++L+  M  + L
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGL 350



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 238/523 (45%), Gaps = 34/523 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G + + + +   D M     +P   ++  L+    + K     ++L  ++  + L P 
Sbjct: 156 KEGMVEAAQEI--LDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPS 213

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N LI+  CK+G    A+ +L  +  +   P+  T++  I+ LC +GRI EA  LF 
Sbjct: 214 VVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFN 273

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            L       N V +  LI+G C+      A  L + M+ E    C P+  TYN++IDGLC
Sbjct: 274 SLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTE---DCLPNSSTYNALIDGLC 330

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+  V +A  L+  M  + +   V TY  LI       D+  A  +  +M+ +G QPDV 
Sbjct: 331 KERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVY 390

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            + A I+  C  G + +   ++ +M +RGV PD +TY  ++D +  +G ++ A ++   M
Sbjct: 391 IYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRM 450

Query: 356 VSKGCRHDVYSYNILINANCKDQ-----------------------------KVEDAVCL 386
              GC    ++Y+ LI    K++                             K E A+ L
Sbjct: 451 FDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALEL 510

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + +ML     P++ TY  L+ GL +VG LG A KL D M    V P    + + ++  C+
Sbjct: 511 FEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCE 570

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G   +AV++  A+        +E+ N L  GL + G  + A  +F  L   G   D V 
Sbjct: 571 LGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVA 630

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
              +I  L K G  D  ++LL  MEA+ C     T+  L+ G 
Sbjct: 631 WKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 142/568 (25%), Positives = 240/568 (42%), Gaps = 67/568 (11%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  F  M +    P + ++T+++  + K  + +    +   +   GL P +   N LI
Sbjct: 92  EAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALI 151

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G+   A  +L  +  +   PN  T+N LI G C +  +  A  L  K+      
Sbjct: 152 DGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLT 211

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VVT+N+LI+G C+      A +L   ++NE G +  PD  TY+  ID LCK G +++A
Sbjct: 212 PSVVTYNSLIHGQCKIGYLDSAYRLLN-LMNENGVV--PDQWTYSVFIDTLCKKGRIEEA 268

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L   +K++ I  N + Y +LI G+C      +A  L   M+     P+  T+NA+I+ 
Sbjct: 269 NVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDG 328

Query: 304 NCKD-----------------------------------GKMDKVNRLLELMIQRGVNPD 328
            CK+                                   G  D  +R+L+ M+  G  PD
Sbjct: 329 LCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPD 388

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
              Y + +  FC  G I  A ++   M  +G   D  +Y ++I+A      +  A  + +
Sbjct: 389 VYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLK 448

Query: 389 EMLSERIRPSVITYNTLLSGLFQ--------------------VGNLGD---------AL 419
            M      PS  TY+ L+  L +                      ++ D         AL
Sbjct: 449 RMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETAL 508

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +L +KM  +   P+  T+A  I GLCK G +  A ++F  +           YN L+N  
Sbjct: 509 ELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCC 568

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C++G    A +L   +   G +P + + + +   L +EG  +KA  +  ++        E
Sbjct: 569 CELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDE 628

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           V +  L+ G ++N        LL  M A
Sbjct: 629 VAWKILIDGLLKNGLSDGCSELLGVMEA 656



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 167/323 (51%), Gaps = 1/323 (0%)

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           +D   A  +F  M   G + + V++  +I+  C+ G++D+   + + M +    P   TY
Sbjct: 18  NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
             ++      GR   A  LF  M  +GC  ++++Y ++INA CK+ K+E+   +  EM+ 
Sbjct: 78  TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           + + PSV TYN L+ G  + G +  A +++D M  N   P+  T+   I G C+   V  
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHR 197

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A+ +   +   +    + TYN LI+G CK+G L +A +L + +   G +PD  T S  I 
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            LCK+G++++AN L   ++ K    +EV +  L+ G+ +  K      LL +M  E   +
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED-CL 316

Query: 573 SDLSLSSKVVDLLSKDKKYRECL 595
            + S  + ++D L K++K +E L
Sbjct: 317 PNSSTYNALIDGLCKERKVQEAL 339


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 242/485 (49%), Gaps = 16/485 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +FT+L+   AK    +  V  F+ +      PD+F  N +++ + +  +   A  +  R+
Sbjct: 128 AFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRM 187

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L+    PN  TF+ LI+G+C  G+   A ++F ++      PN +T+  +I+GLC+ +  
Sbjct: 188 LKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKA 247

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            VA +LF  M +     C PD VTYN+++ G CK G VD+A  LL   +      +   Y
Sbjct: 248 DVAYRLFIAMKDHG---CIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGY 304

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + LI G      +++A+  + +M ++ ++PDV+ +  M+    K GK     RLL  M +
Sbjct: 305 SCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTE 364

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RG+ PDT  YN+L+ G+C +G +  A+ L + +    C     +Y ILI   C+   V D
Sbjct: 365 RGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGD 424

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN-------------D 429
           A  ++ EM      PSV+T+N L+ G  + GN+  A  L  KM++              +
Sbjct: 425 AQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGAN 484

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
            V D+ +  T ++ LC +G +L+A  +   + +      I TYN LI+G CK G +  A 
Sbjct: 485 RVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAF 544

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           KLF  LQ KG  PD VT  T+I+ L    + + A  +L  +    C P    + + +   
Sbjct: 545 KLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWS 604

Query: 550 VQNNK 554
            + NK
Sbjct: 605 CRRNK 609



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 247/521 (47%), Gaps = 54/521 (10%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG   +  A+  FD M + +  P   ++TI+++ L + ++ D    LF  +  +G  PD
Sbjct: 208 KSGK--TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPD 265

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N L++  CK+G    A  +L    +  +  +   ++ LI+GL    R  +A   ++
Sbjct: 266 SVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYR 325

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+      P+V+ +  ++ GL +      AL+L  EM  E G +  PD   YN++I G C
Sbjct: 326 KMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEM-TERGLV--PDTHCYNALIKGYC 382

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
             G +D+AK L L++   +   +  TY  LICG C      +A+ +F EM  +G  P VV
Sbjct: 383 DLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVV 442

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNP--------------DTVTYNSLMDGFCL 341
           TFNA+I+  CK G ++K  +LL   ++ G NP              DT +  ++++  C 
Sbjct: 443 TFNALIDGFCKAGNIEKA-QLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCD 501

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G I +A  + + +   G   ++ +YNILI+  CK   +  A  L++E+  + + P  +T
Sbjct: 502 SGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVT 561

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC---------------- 445
           Y TL++GL       DA  ++D++  N   P +  + +++   C                
Sbjct: 562 YGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYL 621

Query: 446 -----KNGFVLEAV-------QVFQAIRNC------KCELRIETYNCLINGLCKMGRLKT 487
                ++  VL++V       +V +A+R          + ++  Y   + GLC+ GRL+ 
Sbjct: 622 RSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEE 681

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           A K+F  L+    +    +C  +I+ L K G +D A ++ L
Sbjct: 682 ALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFL 722



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 142/568 (25%), Positives = 249/568 (43%), Gaps = 46/568 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +AV  F+ M      P + ++  +L ++ + +     + ++ R+      P++   ++L
Sbjct: 143 EKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSIL 202

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ +CK G T  A  +   + +    PN +T+  +I+GLC   +   A RLF  +    C
Sbjct: 203 IDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGC 262

Query: 183 DPNVVTFNTLINGLC---RTRNTLVALKLFEE---MVNEFGAIC---------------- 220
            P+ VT+N L++G C   R    L  LK FE+   ++++ G  C                
Sbjct: 263 IPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQV 322

Query: 221 ----------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                     KPDV+ Y  ++ GL K G    A  LL +M +R + P+   YN+LI G+C
Sbjct: 323 WYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYC 382

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            +    EAK L +E+  N       T+  +I   C+ G +    ++   M + G  P  V
Sbjct: 383 DLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVV 442

Query: 331 TYNSLMDGFCLVGRISRARELFVSM-----------VSKGCRH--DVYSYNILINANCKD 377
           T+N+L+DGFC  G I +A+ LF  M           +S+G     D  S   ++   C  
Sbjct: 443 TFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDS 502

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             +  A  +  ++      P++ITYN L+ G  + GN+  A KL  ++QL  + PDS T+
Sbjct: 503 GLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTY 562

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T I+GL       +A  V   I    C    E Y   +   C+  ++  A  L+ +   
Sbjct: 563 GTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLR 622

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
             P  D     + +    ++G++++A   LL+M+ K        +   L G  Q  +  +
Sbjct: 623 SIPGRDSEVLKS-VEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEE 681

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
            + +   +    ++V+  S    +  LL
Sbjct: 682 ALKIFFTLEEHNVLVTPPSCVKLIYRLL 709



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 220/487 (45%), Gaps = 51/487 (10%)

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           V+ N +I+ L  +       ++ K++       +   F  LI    +      A++ FE 
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFE- 150

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M+ +F   CKPDV TYN+++  + +   V  A  +  +M   N  PN+ T++ LI G C 
Sbjct: 151 MMKDFD--CKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCK 208

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
               + A  +F EM    + P+ +T+  +I+  C+  K D   RL   M   G  PD+VT
Sbjct: 209 SGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVT 268

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YN+L+ GFC +GR+  A  L           D   Y+ LI+   + ++ EDA   YR+M 
Sbjct: 269 YNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMT 328

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF---------------- 435
              I+P VI Y  ++ GL + G   DAL+L+++M    +VPD+                 
Sbjct: 329 EHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLD 388

Query: 436 -------------------TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
                              T+   I G+C++G V +A Q+F  +    C   + T+N LI
Sbjct: 389 EAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALI 448

Query: 477 NGLCKMGRLKTACKLFHRL-------------QHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           +G CK G ++ A  LF+++             Q    + D  +  TM+  LC  G + KA
Sbjct: 449 DGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKA 508

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            ++L+ +      P+ +T+  L+ GF +    +    L  ++  + L    ++  + +  
Sbjct: 509 YNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLING 568

Query: 584 LLSKDKK 590
           LLS +++
Sbjct: 569 LLSANRE 575


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 232/468 (49%), Gaps = 11/468 (2%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+T L +N++ +    LF  +   G   +    N L+  L + G  +    ++ +++   
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLN--------VFACDPNVVTFNTLINGLCR 198
             PN VTF  LIN +C   R+ +A  + +K++          + +P+VV +NTLI+GLC+
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                  L L E M ++ G  C PD +TYN +IDG CK G ++K KEL  +M    + PN
Sbjct: 396 VGRQQEGLGLMERMRSQKG--CAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPN 453

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+T N+L+ G C       A   F+E    G++ D VT+ A+IN  C     +K   L  
Sbjct: 454 VVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFN 513

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M++ G +PD + Y +L+ GF   GR++ A  +   +   G R D   YN LI   C+  
Sbjct: 514 EMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTN 573

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K      + +EM    ++P  ITYNTL++   + G+L  A K++ KM    VVP   T+ 
Sbjct: 574 KFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYG 633

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNC-KCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
             I+  C NG   EA+++F+ ++   K       YN LIN LCK  ++K+A  L   ++ 
Sbjct: 634 AVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKI 693

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
            G  P+  T + +   L  E  ++K  + +  M    C P  +T   L
Sbjct: 694 WGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEIL 741



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 240/500 (48%), Gaps = 13/500 (2%)

Query: 79  PGMTSFTILLTMLAKNKQ------YDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
           P   +  IL + L K ++       D +V+L  +   +G+    F +  LI  LC+   T
Sbjct: 227 PNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKT 286

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
           +  + +   +++      +   N L+ GL  EG       L +K+      PNVVTF  L
Sbjct: 287 NRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGIL 346

Query: 193 INGLCRTRNTLVALKLFEEMVN--EFGAIC---KPDVVTYNSIIDGLCKDGFVDKAKELL 247
           IN +C+ R    AL++ E+M    E G I    +PDVV YN++IDGLCK G   +   L+
Sbjct: 347 INHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLM 406

Query: 248 LQMK-DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
            +M+  +   P+ ITYN LI GFC   + ++ K LF EM   GV P+VVT N ++   C+
Sbjct: 407 ERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCR 466

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G++           +RG+  D VTY +L++ FC V    +A ELF  M+  GC  D   
Sbjct: 467 TGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIV 526

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y  LI+   +  ++ DA  +  E+    IRP  + YNTL+ G  +        +++ +M+
Sbjct: 527 YYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEME 586

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              + PD+ T+ T I    KNG +  A +V + +        + TY  +IN  C  G   
Sbjct: 587 EAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGN 646

Query: 487 TACKLFHRLQHKGPIP-DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
            A ++F  ++    +P + V  + +I+ LCK  ++  A  L+ DM+     P+  T+  +
Sbjct: 647 EAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAI 706

Query: 546 LRGFVQNNKKSKVVVLLHKM 565
            +G        KV   + +M
Sbjct: 707 FKGLRDEKDLEKVFEFMDRM 726



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 236/474 (49%), Gaps = 13/474 (2%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N  +N     F  MIK+       +   LLT LA+   ++ +  L +++    + P++  
Sbjct: 283 NRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVT 342

Query: 119 LNLLINCLCKMGITSGAFVVLGRI--------LRSCFTPNTVTFNFLINGLCAEGRIMEA 170
             +LIN +CK      A  VL ++        +     P+ V +N LI+GLC  GR  E 
Sbjct: 343 FGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEG 402

Query: 171 ARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
             L +++ +   C P+ +T+N LI+G C+        +LF+EM  E  A   P+VVT N+
Sbjct: 403 LGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVA---PNVVTVNT 459

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ++ G+C+ G V  A    ++ + R +  + +TY +LI  FC V+++++A  LF EM+ +G
Sbjct: 460 LVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSG 519

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             PD + +  +I+   + G+M   + +L  + + G+ PDTV YN+L+ GFC   +  R  
Sbjct: 520 CSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVF 579

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           E+   M   G + D  +YN LI    K+  ++ A  + R+M+   + P+V TY  +++  
Sbjct: 580 EMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAY 639

Query: 410 FQVGNLGDALKLIDKMQL-NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
              GN  +A+++   M+  + V P++  +   I+ LCKN  V  AV + + ++       
Sbjct: 640 CLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPN 699

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
             TYN +  GL     L+   +   R+      PD +T   +  WL   G++++
Sbjct: 700 TTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIER 753



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 245/521 (47%), Gaps = 49/521 (9%)

Query: 112 LFPDL-------FVLNLLINCLCKMGITSGAFVVLGRILRS-----CFTPNTVT----FN 155
           LF DL       ++ N+ ++ L + G    A  V+  +  S     C  PN  T    F+
Sbjct: 179 LFNDLDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNC-RPNDATGDILFS 237

Query: 156 FLI-----NGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
           FL+       L +E  I+     F +  V            LI  LCR R T     LF 
Sbjct: 238 FLLKRERNEELLSEDEIVNLVLKFGEHGVLISS---FWMGRLITRLCRNRKTNRGWDLFT 294

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI---C 267
           EM+ + GA+ +      NS++ GL ++G  ++  EL+ +M + +I PNV+T+  LI   C
Sbjct: 295 EMI-KLGAVLES--AACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMC 351

Query: 268 GFCCVDDWKEAKCLFIEMMDNG---------VQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            F  VDD  E     +E M  G         V+PDVV +N +I+  CK G+  +   L+E
Sbjct: 352 KFRRVDDALEV----LEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLME 407

Query: 319 LM-IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
            M  Q+G  PDT+TYN L+DGFC  G I + +ELF  M  +G   +V + N L+   C+ 
Sbjct: 408 RMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRT 467

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +V  AV  + E     ++   +TY  L++    V N   A++L ++M  +   PD+  +
Sbjct: 468 GRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVY 527

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET--YNCLINGLCKMGRLKTACKLFHRL 495
            T I G  + G + +A  V   ++  K  +R +T  YN LI G C+  +     ++   +
Sbjct: 528 YTLISGFSQAGRMADASFVLAELK--KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEM 585

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +  G  PD +T +T+I +  K G +  A  ++  M     VP+  T+  ++  +  N   
Sbjct: 586 EEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNG 645

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           ++ + +   M A   V  +  + + +++ L K+ K +  ++
Sbjct: 646 NEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVS 686



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 151/316 (47%), Gaps = 6/316 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G I   + +  FD M K   +P + +   L+  + +  +  + V+ F      G+  D
Sbjct: 431 KAGEIEKGKEL--FDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 LIN  C +     A  +   +L+S  +P+ + +  LI+G    GR+ +A+ +  
Sbjct: 489 AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA 548

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +L      P+ V +NTLI G CRT       ++ +EM     A  KPD +TYN++I    
Sbjct: 549 ELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEE---AGLKPDTITYNTLIAYAS 605

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM-MDNGVQPDV 294
           K+G +  A++++ +M    + P V TY ++I  +C   +  EA  +F +M   + V P+ 
Sbjct: 606 KNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNT 665

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           V +N +IN  CK+ K+     L+E M   GV P+T TYN++  G      + +  E    
Sbjct: 666 VIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDR 725

Query: 355 MVSKGCRHDVYSYNIL 370
           M+   C  D  +  IL
Sbjct: 726 MIEHACNPDYITMEIL 741


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 257/508 (50%), Gaps = 8/508 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+    CM +   SPG+  + +++  L K K+      LF  +    + P+    N LI+
Sbjct: 201 AIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLID 260

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK+G    AF +  R+      P  +TFN L+NGLC    + EA R+ +++ V+   P
Sbjct: 261 GYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVP 320

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +  T+ TL +G  +  N   ++ L EE V +   I      T + +++ LCK+G ++KA+
Sbjct: 321 DRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILD---YTCSILLNALCKEGNMEKAE 377

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E+L +  +  + P  + +N+++ G+C V D  +A     +M   G++P+ VT+N+++   
Sbjct: 378 EVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKF 437

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C+   M++  + ++ M+++GV P+  TYN+L+DG+       R  ++   M  KG + +V
Sbjct: 438 CEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNV 497

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            SY  LIN  CKD  + +A  +  +M+   + P+   YN L+ G    G L DA +  D+
Sbjct: 498 ISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDE 557

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M   ++VP   T+   I+GLCK G V+EA  +   I        + TYN LI+G    G 
Sbjct: 558 MVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGN 617

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG--QMDKANDLLLDMEAKNCVPSEVTF 542
           ++ A +L+  ++  G  P + T   +I    KEG   ++K    +L M   N VP  V +
Sbjct: 618 VQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQM---NLVPDRVIY 674

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             L+  +V++    K   L   M A+ +
Sbjct: 675 NALIHCYVEHGDVQKACSLHSAMEAQGI 702



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 260/503 (51%), Gaps = 3/503 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E+   +  M K    P + S  + L  L   K+Y+  + LF  +  +GL PD F+    
Sbjct: 129 SESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKA 188

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I    K+G    A  ++  + R   +P    +N +I GLC E R+ +A +LF ++     
Sbjct: 189 IQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRV 248

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +T+NTLI+G C+      A  + E M  E     +P ++T+NS+++GLC+   +++
Sbjct: 249 APNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN---VEPTIITFNSLLNGLCRAQMMEE 305

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ +L +M+     P+  TY +L  G     +   +  L  E +  GVQ    T + ++N
Sbjct: 306 AQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLN 365

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+G M+K   +L+  ++ G+ P  V +N++++G+C VG I++A      M + G R 
Sbjct: 366 ALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRP 425

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  +YN L+   C+ + +E+A    ++M+ + + P+V TYNTL+ G  +        +++
Sbjct: 426 NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQIL 485

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+   + P+  ++   I+ LCK+  +LEA  +   + +       + YN LI+G C  
Sbjct: 486 EEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIA 545

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G+LK A + F  +  +  +P +VT + +I+ LCK+G++ +A +L  ++  K      +T+
Sbjct: 546 GKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITY 605

Query: 543 CTLLRGFVQNNKKSKVVVLLHKM 565
            +L+ G+       K + L   M
Sbjct: 606 NSLISGYSSAGNVQKALELYETM 628



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 221/450 (49%), Gaps = 4/450 (0%)

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           +ILL  L K    +    + K+   NGL P     N ++N  C++G  + A+  + ++  
Sbjct: 361 SILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEA 420

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
               PN VT+N L+   C    + EA +  KK+      PNV T+NTLI+G  R+     
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
             ++ EEM  +     KP+V++Y  +I+ LCKD  + +A+ +L  M  R + PN   YN 
Sbjct: 481 CFQILEEMEKKG---LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNM 537

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI G C     K+A   F EM+   + P +VT+N +IN  CK GK+ +   L   + ++G
Sbjct: 538 LIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKG 597

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           ++ D +TYNSL+ G+   G + +A EL+ +M   G +  + +Y+ LI A C  + +    
Sbjct: 598 LSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLI-AGCGKEGLVLVE 656

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            +Y+EML   + P  + YN L+    + G++  A  L   M+   + PD  T+   I G 
Sbjct: 657 KIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGH 716

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K G + +   +   ++      + ETY+ LI G CK+     A   +  +   G  P V
Sbjct: 717 FKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSV 776

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
             C  +I  L +EG+   A+ +  +M  K 
Sbjct: 777 SICDNLITGLREEGRSHDADVICSEMNMKG 806



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 220/457 (48%), Gaps = 33/457 (7%)

Query: 148 TPNTVTFNFLINGLCAEGRIM-EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           TP    F+ ++  +C+E +++ E+A L+  +      P+V + N  +  L  T+     L
Sbjct: 108 TPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTL 167

Query: 207 KLFEEMVNE--------FGAICK------------------------PDVVTYNSIIDGL 234
           +LF E+V          +G   +                        P V  YN +I GL
Sbjct: 168 QLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGL 227

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK+  +  A++L  +M DR + PN ITYN+LI G+C V   +EA  +   M    V+P +
Sbjct: 228 CKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTI 287

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +TFN+++N  C+   M++  R+LE M   G  PD  TY +L DG    G +  +  L   
Sbjct: 288 ITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEE 347

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
            V KG +   Y+ +IL+NA CK+  +E A  + ++ L   + P  + +NT+++G  QVG+
Sbjct: 348 AVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGD 407

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A   I+KM+   + P+  T+ + +   C+   + EA +  + +        +ETYN 
Sbjct: 408 INKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNT 467

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI+G  +        ++   ++ KG  P+V++   +I+ LCK+  + +A  +L DM  + 
Sbjct: 468 LIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRG 527

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            VP+   +  L+ G     K         +M A ++V
Sbjct: 528 VVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIV 564



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 174/347 (50%), Gaps = 4/347 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P + ++  L+    ++  +D    + + +   GL P++     LINCLCK   
Sbjct: 453 MVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDAN 512

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A V+LG ++     PN   +N LI+G C  G++ +A R F ++      P +VT+N 
Sbjct: 513 ILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNI 572

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LINGLC+    + A  L  E+  +  +    DV+TYNS+I G    G V KA EL   MK
Sbjct: 573 LINGLCKKGKVMEAENLASEITRKGLSF---DVITYNSLISGYSSAGNVQKALELYETMK 629

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              I P + TY+ LI G C  +     + ++ EM+   + PD V +NA+I+   + G + 
Sbjct: 630 KSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQ 688

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K   L   M  +G+ PD +TYN L+ G    GR+ + + L   M  +G      +Y+ILI
Sbjct: 689 KACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILI 748

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
             +CK +  + A   YREM      PSV   + L++GL + G   DA
Sbjct: 749 VGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDA 795



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 186/386 (48%), Gaps = 4/386 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A    + M  +   P   ++  L+    + K  +      K++   G+ P++   N L
Sbjct: 409 NKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   +  +    F +L  + +    PN +++  LIN LC +  I+EA  +   +     
Sbjct: 469 IDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGV 528

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN   +N LI+G C       A + F+EMV        P +VTYN +I+GLCK G V +
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKDAFRFFDEMV---AREIVPTLVTYNILINGLCKKGKVME 585

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ L  ++  + ++ +VITYNSLI G+    + ++A  L+  M  +G++P + T++ +I 
Sbjct: 586 AENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIA 645

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+G +  V ++ + M+Q  + PD V YN+L+  +   G + +A  L  +M ++G + 
Sbjct: 646 GCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQP 704

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +YN LI  + K+ ++     L  +M    + P   TY+ L+ G  ++ +   A    
Sbjct: 705 DKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWY 764

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNG 448
            +M  N   P        I GL + G
Sbjct: 765 REMFENGFTPSVSICDNLITGLREEG 790



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 136/326 (41%), Gaps = 34/326 (10%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K    P + S+  L+  L K+        +   +   G+ P+  + N+LI+  C  G 
Sbjct: 488 MEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGK 547

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              AF     ++     P  VT+N LINGLC +G++MEA  L  ++       +V+T+N+
Sbjct: 548 LKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNS 607

Query: 192 LINGLCRTRNTLVALKLFEEM--------VNEFGAICK---------------------- 221
           LI+G     N   AL+L+E M        +N +  +                        
Sbjct: 608 LISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNL 667

Query: 222 -PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PD V YN++I    + G V KA  L   M+ + I P+ +TYN LI G        + K 
Sbjct: 668 VPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKN 727

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L  +M   G+ P   T++ +I  +CK    D        M + G  P     ++L+ G  
Sbjct: 728 LVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLR 787

Query: 341 LVGRISRARELFVSMVSKG---CRHD 363
             GR   A  +   M  KG   CR D
Sbjct: 788 EEGRSHDADVICSEMNMKGKDDCRAD 813


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 247/470 (52%), Gaps = 8/470 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           SF +LL   A   Q  + +++F  +   G  P L   N L+N L + G    A +V G++
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
             +   P+  T   +    C +GR+ +A    +++     + N+V ++ +++  C    T
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR-NINPNVIT 261
             A ++ E +  +      P+VVTY  ++ G CKDG +++A+ ++ +MK+  +I  + + 
Sbjct: 270 EDARRILESLQRKG---LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y  +I G+C      +A  +  EM D G+  ++  +N MIN  CK G+M++V ++L+ M 
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             G+ PD  +YN+L+DG+C  G + +A E+   MV  G      +YN L+   C    ++
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           DA+ L+  ML   + P+ I+ +TLL GLF+ G    AL L  +     +  +  TF T I
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           +GLCK G + EA ++   ++  +C     TY  L +G CK+G+L TA  L ++++H G  
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFA 566

Query: 502 PDVVTCSTMI--HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           P V   ++ I  H++ K  Q  K ND+  +M A+   P+ VT+  L+ G+
Sbjct: 567 PSVEMFNSFITGHFIAK--QWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 255/524 (48%), Gaps = 39/524 (7%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            L     +G ++S  A+  FD M K+   P + S   LL  L ++        ++ ++  
Sbjct: 154 LLRAHADAGQLSS--ALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRI 211

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ PD F + ++    C+ G  + A   +  +       N V ++ +++  C  G   +
Sbjct: 212 AGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTED 271

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A R+ + L      PNVVT+  L+ G C+      A ++ +EM  E G I   D V Y  
Sbjct: 272 ARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM-KETGDIVV-DEVAYGM 329

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+G C+ G +D A  +  +M+D  I+ N+  YN++I G C +   +E + +  EM D G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++PD  ++N +I+  C++G M K   +  +M++ G+   T+TYN+L+ GFC +  I  A 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            L+  M+ +G   +  S + L++   K  K E A+ L++E L+  +  +VIT+NT+++GL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            ++G + +A +L+D+M+     PDS T+ T  DG CK G +  A  +   + +      +
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 470 E-----------------------------------TYNCLINGLCKMGRLKTACKLFHR 494
           E                                   TY  LI G CK G L  AC L+  
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFE 629

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           + + G  P+V  CS ++    KEG++D+AN +L  +   + +P 
Sbjct: 630 MVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG 673



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 270/533 (50%), Gaps = 45/533 (8%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  ++  L K  + + V  + + +   G+ PD +  N LI+  C+ G    AF +   ++
Sbjct: 362 YNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV 421

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R+     T+T+N L+ G C+   I +A RL+  +      PN ++ +TL++GL +   T 
Sbjct: 422 RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTE 481

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            AL L++E +    A    +V+T+N++I+GLCK G + +A+ELL +MK+    P+ +TY 
Sbjct: 482 QALNLWKETLARGLA---KNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYR 538

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +L  G+C +     A  L  +M   G  P V  FN+ I  +    +  KVN +   M  R
Sbjct: 539 TLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G++P+ VTY +L+ G+C  G +  A  L+  MV+ G   +V+  + L++   K+ KV++A
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA 658

Query: 384 VCLYREMLSERIRPSV--------------------------ITYNTLLSGLFQVGNLGD 417
             + +++++  + P                            + +N ++ GL + G + D
Sbjct: 659 NLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIAD 718

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A  L + ++    +PD+FT+++ I G   +G + EA  +   + +      I TYN LI 
Sbjct: 719 AKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIY 778

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ----------------MD 521
           GLCK G+L  A  LF++LQ KG  P+ +T +T+I   CKEG+                M+
Sbjct: 779 GLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYME 838

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           +A  LL  M   N  P+ +T+CTL+ G++++    ++  L  +M    L+ ++
Sbjct: 839 EAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 157/614 (25%), Positives = 271/614 (44%), Gaps = 101/614 (16%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +  I+     ++ +    V   + +   GL  +L   + +++C C MG T  A  +
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV------------------- 179
           L  + R   +PN VT+  L+ G C +GR+ EA R+ K++                     
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335

Query: 180 -----------------FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
                                 N+  +NT+INGLC+        K+ +EM  + G   +P
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM-EDVG--MRP 392

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D  +YN++IDG C++G + KA E+   M    +    +TYN+L+ GFC +    +A  L+
Sbjct: 393 DKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW 452

Query: 283 IEMMDNGVQPD-----------------------------------VVTFNAMINYNCKD 307
             M+  GV P+                                   V+TFN +IN  CK 
Sbjct: 453 FLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKI 512

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G+M +   LL+ M +    PD++TY +L DG+C +G++  A  L   M   G    V  +
Sbjct: 513 GRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N  I  +   ++      ++ EM +  + P+++TY  L++G  + GNL +A  L  +M  
Sbjct: 573 NSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN 632

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC--------------KCELRIET-- 471
           N + P+ F  +  +    K G V EA  V Q + N               K    ++T  
Sbjct: 633 NGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIA 692

Query: 472 ----------YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                     +N +I GLCK GR+  A  LF  L++K  +PD  T S++IH     G +D
Sbjct: 693 DGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSID 752

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A  L   M +    P+ +T+ +L+ G  ++ K S+ V L +K+ ++ +  + ++ ++ +
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT-L 811

Query: 582 VDLLSKDKKYRECL 595
           +D   K+ K  E  
Sbjct: 812 IDEYCKEGKTTEAF 825



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 245/520 (47%), Gaps = 61/520 (11%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKN----KQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           M +M    G+ + T+    L K        D  + L+  +   G+ P+    + L++ L 
Sbjct: 416 MCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLF 475

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G T  A  +    L      N +TFN +INGLC  GR+ EA  L  ++    C P+ +
Sbjct: 476 KAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSL 535

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+ TL +G C+      A  L  +M +   A   P V  +NS I G        K  ++ 
Sbjct: 536 TYRTLFDGYCKLGQLGTATHLMNKMEHLGFA---PSVEMFNSFITGHFIAKQWHKVNDIH 592

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M  R ++PN++TY +LI G+C   +  EA  L+ EM++NG+ P+V   +A+++   K+
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKE 652

Query: 308 GKMDKVNRLLELMIQRGVNP----------------DTVT----------YNSLMDGFCL 341
           GK+D+ N +L+ ++   + P                DT+           +N ++ G C 
Sbjct: 653 GKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCK 712

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            GRI+ A+ LF S+ +K    D ++Y+ LI+       +++A  L   MLS  + P++IT
Sbjct: 713 SGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIIT 772

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN+L+ GL + G L  A+ L +K+Q   + P+  T+ T ID  CK G   EA ++ Q   
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK-- 830

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                            + + G ++ A KL  ++      P+ +T  T+IH   K G M+
Sbjct: 831 -----------------MVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNME 873

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           + + L  +M  +  +P+          ++ N K+S  VV+
Sbjct: 874 EISKLYDEMHIRGLLPTN---------WIGNWKRSDPVVV 904



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/431 (23%), Positives = 198/431 (45%), Gaps = 13/431 (3%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLF-------EEMVNEFGAICKP---DVVTYNSIIDG 233
           P++V+   L++ L R R    A  L        E +      + +      V+++ ++  
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
               G +  A  +   M      P++ + N L+       D   A  ++ +M   GV PD
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
             T   M    C+DG++ +    +E M   G+  + V Y+++MD +C +G    AR +  
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM-LSERIRPSVITYNTLLSGLFQV 412
           S+  KG   +V +Y +L+   CKD ++E+A  + +EM  +  I    + Y  +++G  Q 
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G + DA ++ ++M+   +  + F + T I+GLCK G + E  +V Q + +        +Y
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI+G C+ G ++ A ++   +   G     +T +T++   C    +D A  L   M  
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL--LSKDKK 590
           +   P+E++  TLL G  +  K  + + L  +  A  L  + ++ ++ +  L  + +  +
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAE 517

Query: 591 YRECLNQFRHL 601
             E L++ + L
Sbjct: 518 AEELLDRMKEL 528



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 185/399 (46%), Gaps = 15/399 (3%)

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD-------------RNINPNVITYNS 264
           A  +P +V++  ++  L +      A+ LL  +               R+   + ++++ 
Sbjct: 94  APSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDL 153

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+           A  +F  M   G +P + + N ++N   + G       +   M   G
Sbjct: 154 LLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAG 213

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           V PD  T   +   +C  GR+++A E    M   G   ++ +Y+ +++  C     EDA 
Sbjct: 214 VLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDAR 273

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTFATYIDG 443
            +   +  + + P+V+TY  L+ G  + G + +A +++ +M +  D+V D   +   I+G
Sbjct: 274 RILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING 333

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C+ G + +A +V   +R+    + +  YN +INGLCK+GR++   K+   ++  G  PD
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
             + +T+I   C+EG M KA ++   M       + +T+ TLL+GF   +     + L  
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            M    +  +++S S+ ++D L K  K  + LN ++  L
Sbjct: 454 LMLKRGVAPNEISCST-LLDGLFKAGKTEQALNLWKETL 491



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 118/254 (46%), Gaps = 35/254 (13%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           +  D +    P      + +++  L K+ +     SLF+ L +    PD F  + LI+  
Sbjct: 686 HVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
              G    AF +   +L +  TPN +T+N LI GLC  G++  A  LF KL      PN 
Sbjct: 746 AASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           +T+NTLI+  C+   T  A KL ++MV E                      G++++A +L
Sbjct: 806 ITYNTLIDEYCKEGKTTEAFKLKQKMVEE----------------------GYMEEAIKL 843

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP----------DVVT 296
           L QM + N++PN ITY +LI G+    + +E   L+ EM   G+ P          D V 
Sbjct: 844 LDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNWKRSDPVV 903

Query: 297 FNAMINYNCKDGKM 310
            N   N+N KDG M
Sbjct: 904 VN---NWNRKDGHM 914



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 24/176 (13%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG I   +A   F+ +   +  P   +++ L+   A +   D   SL   + S GL P+
Sbjct: 712 KSGRIA--DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N LI  LCK G  S A  +  ++     +PN +T+N LI+  C EG+  EA +L +
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829

Query: 176 KL-------------------NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           K+                   NV   DPN +T+ TLI+G  ++ N     KL++EM
Sbjct: 830 KMVEEGYMEEAIKLLDQMIENNV---DPNYITYCTLIHGYIKSGNMEEISKLYDEM 882


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 171/546 (31%), Positives = 278/546 (50%), Gaps = 49/546 (8%)

Query: 40  HFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIK-MKPSPGMTSFTILLTMLAKNKQYD 98
           HF+  T  A FL+    +G + S   + FF    K  + S G+ +   +L +LA +K+Y 
Sbjct: 38  HFRT-TKPAIFLDQLFNAG-VDSELVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYS 95

Query: 99  TVVSLFKRLN----------------------SNGLFPDLFVL----NLLINCLCKMGIT 132
            V S   +L                       +N L  D+ VL    NL I+  C+    
Sbjct: 96  KVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACE---- 151

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
                V  R+    F  +  + N L++ L       E   ++K++      PN+ TFN  
Sbjct: 152 -----VFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIF 206

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK---AKELLLQ 249
           INGLC+      A  + E+ +  +G    P++VTYN++IDG CK G   K   A  +L +
Sbjct: 207 INGLCKAGKLNKAEDVIED-IKAWG--FSPNIVTYNTLIDGHCKKGSAGKMYRADAILKE 263

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M    I PN IT+N+LI GFC  ++   AK  F EM   G++P++VT+N++IN    +GK
Sbjct: 264 MLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGK 323

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+   L + M+  G+ P+ VT+N+L++GFC    I  AR+LF  +  +    +  ++N 
Sbjct: 324 LDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           +I+A CK   +E+   L+  ML E I P+V TYN L++GL +  N+  A KL+++M+  +
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           +  D  T+   I G CK+G   +A ++   + N   +    TYN L++G C  G LK A 
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT----- 544
           K+  +++ +G   +VVT + +I   CK G+++ AN LL +M  K   P+  T+       
Sbjct: 504 KVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEM 563

Query: 545 LLRGFV 550
           L +GF+
Sbjct: 564 LEKGFI 569



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/398 (33%), Positives = 200/398 (50%), Gaps = 42/398 (10%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN T  E  Y +  MIK +  P +T+F I +  L K  + +    + + + + G  P++ 
Sbjct: 178 GNETG-EMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIV 236

Query: 118 VLNLLINCLCKMGITSGAF---VVLGRIL------------------------------- 143
             N LI+  CK G     +    +L  +L                               
Sbjct: 237 TYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAF 296

Query: 144 ----RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
               R    PN VT+N LINGL   G++ EA  L+ K+      PN+VTFN LING C+ 
Sbjct: 297 EEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKK 356

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
           +    A KLF+++  +      P+ +T+N++ID  CK G +++   L   M D  I PNV
Sbjct: 357 KMIKEARKLFDDIAEQ---DLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNV 413

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
            TYN LI G C   + + AK L  EM +  ++ DVVT+N +I   CKDG+  K  +LL  
Sbjct: 414 STYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGE 473

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M+  GV P+ VTYN+LMDG+C+ G +  A ++   M  +G R +V +YN+LI   CK  K
Sbjct: 474 MLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGK 533

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +EDA  L  EML + + P+  TY+ +   + + G + D
Sbjct: 534 LEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPD 571



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 189/337 (56%), Gaps = 4/337 (1%)

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N ++  L K     + + +  +M  R I PN+ T+N  I G C      +A+ +  ++  
Sbjct: 169 NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228

Query: 288 NGVQPDVVTFNAMINYNCKDG---KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
            G  P++VT+N +I+ +CK G   KM + + +L+ M+   + P+ +T+N+L+DGFC    
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDEN 288

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A+  F  M  +G + ++ +YN LIN    + K+++A+ L+ +M+   ++P+++T+N 
Sbjct: 289 VLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNA 348

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L++G  +   + +A KL D +   D+VP++ TF T ID  CK G + E   +  ++ +  
Sbjct: 349 LINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEG 408

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + TYNCLI GLC+   ++ A KL + +++     DVVT + +I   CK+G+  KA 
Sbjct: 409 IFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAE 468

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGF-VQNNKKSKVVV 560
            LL +M      P+ VT+ TL+ G+ ++ N K+ + V
Sbjct: 469 KLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKV 505



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 125/245 (51%), Gaps = 11/245 (4%)

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            I  A E+F  +   G +  + S N L++A  K  +  +   +Y+EM+  RI+P++ T+N
Sbjct: 145 EIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFN 204

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA---- 459
             ++GL + G L  A  +I+ ++     P+  T+ T IDG CK G    A ++++A    
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKG---SAGKMYRADAIL 261

Query: 460 ---IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              + N  C   I T+N LI+G CK   +  A   F  +Q +G  P++VT +++I+ L  
Sbjct: 262 KEMLANKICPNEI-TFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSN 320

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            G++D+A  L   M      P+ VTF  L+ GF +     +   L   +A + LV + ++
Sbjct: 321 NGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAIT 380

Query: 577 LSSKV 581
            ++ +
Sbjct: 381 FNTMI 385


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 257/489 (52%), Gaps = 7/489 (1%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +++ ++ +G+  +++ LN+++N LCK G        L  +      P+ VT+N LI+   
Sbjct: 212 IYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYS 271

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
           ++G + EA  L   +      P V T+NT+INGLC+      A ++F EM+    +   P
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR---SGLSP 328

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D  TY S++   CK G   + + +   M+ R++ P+++ ++S++  F    +  +A   F
Sbjct: 329 DSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 388

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             + + G+ PD V +  +I   C+ G + +   L   M+Q+G   D VTYN+++ G C  
Sbjct: 389 NSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 448

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             +  A +LF  M  +G   D Y+  ILI+ +CK   +++A+ L+++M  +RI+  V+TY
Sbjct: 449 KMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTY 508

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           NTLL G  +VG++  A ++   M   +++P   +F+  ++ LC  G + EA +V+  + +
Sbjct: 509 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMIS 568

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              +  +   N +I G C+ G          ++  +G +PD ++ +T+I+   KE  M K
Sbjct: 569 KSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSK 628

Query: 523 ANDLLLDMEAKN--CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           A  L+  ME K    VP   T+ ++L GF + N+  +   +L KM  E+ V  D S  + 
Sbjct: 629 AFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKM-IERGVNPDRSTYTS 687

Query: 581 VVD-LLSKD 588
           +++  +S+D
Sbjct: 688 LINGFVSQD 696



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/555 (27%), Positives = 278/555 (50%), Gaps = 24/555 (4%)

Query: 18  YRCNFWCSFGRPPNPKTDLSSHHFKDGT-SIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           YRC    S G+    +   +  +FK  + S++  ++   +SG ++  ++     C+++M 
Sbjct: 76  YRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQS-----CVLRMI 130

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
              G++   I+          +++VS +    SN       V +LLI    +      A+
Sbjct: 131 RRSGVSRVEIV----------NSLVSTYSNCGSND-----SVFDLLIRTFVQARKLREAY 175

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
                +    +T +    N LI  L   G +  A R++++++      NV T N ++N L
Sbjct: 176 EAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNAL 235

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+    +  +  F   V E G    PD+VTYN++I      G +++A EL+  M  +  +
Sbjct: 236 CKD-GKMEKVGTFLSEVQEKGVY--PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFS 292

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P V TYN++I G C    ++ AK +F EM+ +G+ PD  T+ +++   CK G   +   +
Sbjct: 293 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENI 352

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M  R V PD V ++S+M  F   G + +A   F S+   G   D   Y ILI   C+
Sbjct: 353 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 412

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
              + +A+ L  EML +     V+TYNT+L GL +   LG+A KL ++M    + PDS+T
Sbjct: 413 KGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYT 472

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
               IDG CK G +  A+++F+ ++  + +L + TYN L++G  K+G + TA +++  + 
Sbjct: 473 LTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 532

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            K  +P  ++ S +++ LC +G + +A  +  +M +K+  P+ +   ++++G+ ++   S
Sbjct: 533 SKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNAS 592

Query: 557 KVVVLLHKMAAEKLV 571
              + L KM +E  V
Sbjct: 593 DGEIFLEKMISEGFV 607



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 234/463 (50%), Gaps = 5/463 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L++  +     +    L   + S G  P ++  N +IN LCK G    A  V
Sbjct: 258 PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEV 317

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +LRS  +P++ T+  L+   C +G  +E   +F  +      P++V F+++++   R
Sbjct: 318 FAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTR 377

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           + N   AL  F   V E G I  PD V Y  +I G C+ G + +A  L  +M  +    +
Sbjct: 378 SGNLDKALMYFNS-VKEAGLI--PDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMD 434

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+TYN+++ G C      EA  LF EM + G+ PD  T   +I+ +CK G +     L +
Sbjct: 435 VVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFK 494

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M ++ +  D VTYN+L+DGF  VG I  A+E++  MVSK       S++IL+NA C   
Sbjct: 495 KMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKG 554

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            + +A  ++ EM+S+ I+P+V+  N+++ G  + GN  D    ++KM     VPD  ++ 
Sbjct: 555 HLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYN 614

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCEL--RIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           T I G  K   + +A  + + +   +  L   + TYN +++G C+  ++K A  +  ++ 
Sbjct: 615 TLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMI 674

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
            +G  PD  T +++I+    +  + +A     +M  +   P +
Sbjct: 675 ERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 197/393 (50%), Gaps = 7/393 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D T+    L +  K G+    E +  F  M      P +  F+ ++++  ++   D  + 
Sbjct: 329 DSTTYRSLLMEACKKGDAVETENI--FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 386

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            F  +   GL PD  +  +LI   C+ G+ S A  +   +L+     + VT+N +++GLC
Sbjct: 387 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLC 446

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
               + EA +LF ++      P+  T   LI+G C+  N   A++LF++M  +     K 
Sbjct: 447 KRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKR---IKL 503

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           DVVTYN+++DG  K G +D AKE+   M  + I P  I+++ L+   C      EA  ++
Sbjct: 504 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVW 563

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM+   ++P V+  N+MI   C+ G        LE MI  G  PD ++YN+L+ GF   
Sbjct: 564 DEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKE 623

Query: 343 GRISRARELFVSMVSK--GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             +S+A  L   M  K  G   DV++YN +++  C++ ++++A  + R+M+   + P   
Sbjct: 624 ENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRS 683

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
           TY +L++G     NL +A +  D+M      PD
Sbjct: 684 TYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 195/389 (50%), Gaps = 5/389 (1%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  M++   SP  T++  LL    K        ++F  + S  + PDL   + +++   +
Sbjct: 318 FAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTR 377

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A +    +  +   P+ V +  LI G C +G I EA  L  ++    C  +VVT
Sbjct: 378 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVT 437

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +NT+++GLC+ +    A KLF EM  E G    PD  T   +IDG CK G +  A EL  
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMT-ERGLF--PDSYTLTILIDGHCKLGNLQNAMELFK 494

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK++ I  +V+TYN+L+ GF  V D   AK ++ +M+   + P  ++F+ ++N  C  G
Sbjct: 495 KMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKG 554

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            + +  R+ + MI + + P  +  NS++ G+C  G  S        M+S+G   D  SYN
Sbjct: 555 HLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYN 614

Query: 369 ILINANCKDQKVEDAVCLYREMLSER--IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
            LI    K++ +  A  L ++M  ++  + P V TYN++L G  +   + +A  ++ KM 
Sbjct: 615 TLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMI 674

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
              V PD  T+ + I+G      + EA +
Sbjct: 675 ERGVNPDRSTYTSLINGFVSQDNLTEAFR 703



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 3/253 (1%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F D  ++   ++   K GN+ +  A+  F  M + +    + ++  LL    K    DT 
Sbjct: 467 FPDSYTLTILIDGHCKLGNLQN--AMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTA 524

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
             ++  + S  + P     ++L+N LC  G  S AF V   ++     P  +  N +I G
Sbjct: 525 KEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKG 584

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
            C  G   +     +K+      P+ +++NTLI G  +  N   A  L ++M  + G + 
Sbjct: 585 YCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLV 644

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PDV TYNSI+ G C++  + +A+ +L +M +R +NP+  TY SLI GF   D+  EA  
Sbjct: 645 -PDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFR 703

Query: 281 LFIEMMDNGVQPD 293
              EM+  G  PD
Sbjct: 704 FHDEMLQRGFSPD 716


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 260/551 (47%), Gaps = 17/551 (3%)

Query: 27  GRPPNPKTDLSSHHFKDGTSIAKFLNDR-----HKSGNITSNEAVYFFDCMIKMKPSPGM 81
           GR  +    L       G SI   + D       K G +   +A+  FD MI    +PG 
Sbjct: 328 GRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKAL--FDGMITFGVTPGA 385

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            ++  L+    + K       L   +    +    +     +  +C  G   GA+ ++  
Sbjct: 386 RAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKE 445

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +  S   PN V +  LI     + R  +A R+ K++      P+   +N+LI GL + + 
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505

Query: 202 TLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
              A     EMV N F    KPD  TY + I G  + G    A + + +M +  + PN +
Sbjct: 506 MDEARSFLLEMVENGF----KPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKV 561

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
               LI  +C      EA   F  M++ G+  D  T+  ++N   K+GK++    +   M
Sbjct: 562 LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
             +G+ PD  +Y +L+DGF  +G + +A  +F  MV  G   +V  YN+L+   C+  ++
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEI 681

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           E A  L  EM  +   P+ +TY T++ G  + G+L +A +L D+M+L  +VPDSF + T 
Sbjct: 682 EKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTL 741

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ---- 496
           +DG C+   V  A+ +F+      C      +N LIN + K G+ +    + +RL     
Sbjct: 742 VDGCCRLNDVERAITIFET-NEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSF 800

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            K   P+ VT + MI +LCKEG ++ A +L   M+  N +P+ +T+ +LL G+ +  ++S
Sbjct: 801 DKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRS 860

Query: 557 KVVVLLHKMAA 567
           ++  +  ++ A
Sbjct: 861 EMFSVFDEVIA 871



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 152/591 (25%), Positives = 251/591 (42%), Gaps = 90/591 (15%)

Query: 63  NEAVYFFDCM--IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           +EAV+ F     + +   P +     LL  L K  + D    ++K +    +  D+    
Sbjct: 169 DEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYE 228

Query: 121 LLINCLCKMGITSGAFVVLGRILR-------------------SC--FTPNTVTFNFLIN 159
           +LI   C+ G    A  VL +                      SC    P+  ++N LI+
Sbjct: 229 MLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLID 288

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN----- 214
           GLC + R+ +A  L  ++N      + V ++ LI+GL + RN   A  L  EMV+     
Sbjct: 289 GLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSI 348

Query: 215 -------------EFGAICK--------------PDVVTYNSIIDGLCKDGFVDKAKELL 247
                        + GA+ K              P    Y S+I+G  ++  V K  ELL
Sbjct: 349 DPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELL 408

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
           +++K RNI  +  TY + + G C   D   A  +  EM  +G +P+VV +  +I    + 
Sbjct: 409 VEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQK 468

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            +     R+L+ M ++G+ PDT  YNSL+ G     ++  AR   + MV  G + D ++Y
Sbjct: 469 SRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528

Query: 368 NI-----------------------------------LINANCKDQKVEDAVCLYREMLS 392
                                                LIN  CK  KV +A   +R M+ 
Sbjct: 529 GAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVE 588

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           + I     TY  L++GL + G + DA ++  +M+   + PD F++ T IDG  K G + +
Sbjct: 589 QGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQK 648

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A  +F  +        +  YN L+ G C+ G ++ A +L   +  KG  P+ VT  T+I 
Sbjct: 649 ASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIID 708

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
             CK G + +A  L  +M+ K  VP    + TL+ G  + N   + + +  
Sbjct: 709 GYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE 759



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 233/511 (45%), Gaps = 46/511 (9%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  +T L+    +  ++   V + K +   G+ PD F  N LI  L K      A   
Sbjct: 453 PNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSF 512

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  ++ + F P+  T+   I+G    G    A +  K++      PN V    LIN  C+
Sbjct: 513 LLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCK 572

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
               + A   F  MV E G +   D  TY  +++GL K+G V+ A+E+  +M+ + I P+
Sbjct: 573 KGKVIEACSAFRSMV-EQGIL--GDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPD 629

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V +Y +LI GF  + + ++A  +F EM+  G+  +V+ +N ++   C+ G+++K   LL+
Sbjct: 630 VFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLD 689

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M  +G  P+ VTY +++DG+C  G ++ A +LF  M  KG   D + Y  L++  C+  
Sbjct: 690 EMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLN 749

Query: 379 KVEDAVCLYR--------------------------EMLSERI------------RPSVI 400
            VE A+ ++                           E+ ++ I            +P+ +
Sbjct: 750 DVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDV 809

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYN ++  L + GNL  A +L   MQ  +++P   T+ + ++G  K G   E   VF  +
Sbjct: 810 TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEV 869

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD-----VVTCSTMIHWLC 515
                E     Y+ +IN   K G    A  L  ++  K  + D     + TC  ++    
Sbjct: 870 IAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFA 929

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           K G+M+ A  ++ +M     +P   T   L+
Sbjct: 930 KVGEMEVAEKVVENMVRLKYIPDSSTVIELI 960



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 228/507 (44%), Gaps = 48/507 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +AV     M +   +P    +  L+  L+K K+ D   S    +  NG  PD F     
Sbjct: 472 GDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAF 531

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   + G  + A   +  +L     PN V    LIN  C +G+++EA   F+ +     
Sbjct: 532 ISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGI 591

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +  T+  L+NGL +      A ++F EM    G    PDV +Y ++IDG  K G + K
Sbjct: 592 LGDAKTYTVLMNGLVKNGKVNDAEEIFHEMR---GKGIAPDVFSYGTLIDGFSKLGNMQK 648

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +  +M    +  NVI YN L+ GFC   + ++AK L  EM   G  P+ VT+  +I+
Sbjct: 649 ASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIID 708

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA-------------- 348
             CK G + +  +L + M  +G+ PD+  Y +L+DG C +  + RA              
Sbjct: 709 GYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASS 768

Query: 349 ----------------RELFVSMVSK---------GCRHDVYSYNILINANCKDQKVEDA 383
                            EL   M+++         G  +DV +YNI+I+  CK+  +E A
Sbjct: 769 SAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDV-TYNIMIDYLCKEGNLEAA 827

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+  M    + P+VITY +LL+G  ++G   +   + D++    + PD+  ++  I+ 
Sbjct: 828 KELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINA 887

Query: 444 LCKNGFVLEAVQVFQAI--RNC---KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             K G   +A+ +   +  +N     C+L I T   L++G  K+G ++ A K+   +   
Sbjct: 888 FLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRL 947

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKAND 525
             IPD  T   +I+  C       A D
Sbjct: 948 KYIPDSSTVIELINESCISSNQRMAAD 974



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 198/405 (48%), Gaps = 15/405 (3%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N+  K G +   EA   F  M++        ++T+L+  L KN + +    +F  +  
Sbjct: 566 LINEYCKKGKVI--EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRG 623

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ PD+F    LI+   K+G    A  +   ++++  T N + +N L+ G C  G I +
Sbjct: 624 KGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEK 683

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  L  +++     PN VT+ T+I+G C++ +   A +LF+EM  + G +  PD   Y +
Sbjct: 684 AKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK-GLV--PDSFVYTT 740

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ++DG C+   V++A  +  +  ++    +   +N+LI         +    +   +MD  
Sbjct: 741 LVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGS 799

Query: 290 V----QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
                +P+ VT+N MI+Y CK+G ++    L   M +  + P  +TY SL++G+  +GR 
Sbjct: 800 FDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRR 859

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI-----RPSVI 400
           S    +F  +++ G   D   Y+++INA  K+     A+ L  +M ++       + S+ 
Sbjct: 860 SEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSIS 919

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           T   LLSG  +VG +  A K+++ M     +PDS T    I+  C
Sbjct: 920 TCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 169/373 (45%), Gaps = 42/373 (11%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    +N   K+G +  N+A   F  M     +P + S+  L+   +K        S
Sbjct: 594 DAKTYTVLMNGLVKNGKV--NDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASS 651

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +   GL  ++ + N+L+   C+ G    A  +L  +    F PN VT+  +I+G C
Sbjct: 652 IFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYC 711

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE------------ 210
             G + EA +LF ++ +    P+   + TL++G CR  +   A+ +FE            
Sbjct: 712 KSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAP 771

Query: 211 ------------------EMVNE-----FGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
                             +M+N      F    KP+ VTYN +ID LCK+G ++ AKEL 
Sbjct: 772 FNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELF 831

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M+  N+ P VITY SL+ G+  +    E   +F E++  G++PD + ++ +IN   K+
Sbjct: 832 HHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKE 891

Query: 308 GKMDKVNRLLELMIQRGVNPD-----TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           G   K   LL+ M  +    D       T  +L+ GF  VG +  A ++  +MV      
Sbjct: 892 GMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIP 951

Query: 363 DVYSYNILINANC 375
           D  +   LIN +C
Sbjct: 952 DSSTVIELINESC 964



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 197/451 (43%), Gaps = 20/451 (4%)

Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACD--PNVVTFNTLINGLCRTRNTLVALKLFEE 211
           F  LI+G   +G + EA  +F        D  P++   N L++ L +     +   +++ 
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG 214

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           MV         DV +Y  +I   C+DG V  AK++LL+           T   L      
Sbjct: 215 MVERNVVF---DVQSYEMLIGAHCRDGNVQLAKDVLLK-----------TEEELGTATLN 260

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
           VD+  E K     M   G+ P   ++N +I+  CK  +++    LL  M   G+  D V 
Sbjct: 261 VDEALELKK---SMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVA 317

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y+ L+DG         A  L   MVS G   D   Y+  I    K+  +E A  L+  M+
Sbjct: 318 YSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMI 377

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
           +  + P    Y +L+ G F+  N+    +L+ +++  ++V   +T+ T + G+C +G + 
Sbjct: 378 TFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLD 437

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
            A  + + +    C   +  Y  LI    +  R   A ++   ++ +G  PD    +++I
Sbjct: 438 GAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLI 497

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             L K  +MD+A   LL+M      P   T+   + G+++  + +     + +M  E  V
Sbjct: 498 IGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM-LECGV 556

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           + +  L + +++   K  K  E  + FR ++
Sbjct: 557 IPNKVLCTGLINEYCKKGKVIEACSAFRSMV 587



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 170/404 (42%), Gaps = 44/404 (10%)

Query: 234 LCKDGFVDKAKELLLQMKDRNI--------------------NPNVITYNSLICGFCCVD 273
           LC  G ++KA  ++++M +R                      +  V+ +  LI G+    
Sbjct: 107 LCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFGILIDGYIEKG 166

Query: 274 DWKEAKCLF--IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
              EA  +F   + +D  + P +   N +++   K  ++D    + + M++R V  D  +
Sbjct: 167 FLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQS 226

Query: 332 YNSLMDGFCLVGRISRAR---------------------ELFVSMVSKGCRHDVYSYNIL 370
           Y  L+   C  G +  A+                     EL  SM  KG      SYN+L
Sbjct: 227 YEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLL 286

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+  CK +++EDA  L  EM S  +    + Y+ L+ GL +  N   A  L+ +M  +  
Sbjct: 287 IDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGF 346

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
             D   +  +I  + K G + +A  +F  +           Y  LI G  +   ++   +
Sbjct: 347 SIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYE 406

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L   ++ +  +    T  T +  +C  G +D A +++ +M A  C P+ V + TL++ F+
Sbjct: 407 LLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFL 466

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           Q ++    V +L +M  + +       +S ++  LSK KK  E 
Sbjct: 467 QKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIG-LSKAKKMDEA 509


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1114

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 169/569 (29%), Positives = 270/569 (47%), Gaps = 52/569 (9%)

Query: 46   SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
            S+AK   DR         EA   F  +  +   P   ++ +++   +K  + D  + L  
Sbjct: 479  SLAKAGRDR---------EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 529

Query: 106  RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
             +  N   PD+ V+N LIN L K      A+ +  R+      P  VT+N L+ GL   G
Sbjct: 530  EMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 589

Query: 166  RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
            +I EA  LF+ +    C PN +TFNTL + LC+     +ALK+  +M++     C PDV 
Sbjct: 590  KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD---MGCVPDVF 646

Query: 226  TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG----------------- 268
            TYN+II GL K+G V +A     QMK + + P+ +T  +L+ G                 
Sbjct: 647  TYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANF 705

Query: 269  -FCCVDD-----WKE--AKCLFIEMMDNGVQ-PDVVTFNAM-----------INYNCKDG 308
             + C D      W++     L    +DN V   + +  N +           I Y+ K  
Sbjct: 706  LYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHN 765

Query: 309  KMDKVNRLLELMIQR-GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
                   L E   +  GV P   TYN L+ G      I  A+++F+ + + GC  DV +Y
Sbjct: 766  NASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATY 825

Query: 368  NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI-DKMQ 426
            N L++A  K  K+++   +Y+EM +    P+ IT+N ++SGL + GN+ DAL L  D M 
Sbjct: 826  NFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMS 885

Query: 427  LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              D  P + T+   IDGL K+G + EA Q+F+ + +  C      YN LING  K G   
Sbjct: 886  DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEAD 945

Query: 487  TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
             AC LF R+  +G  PD+ T S ++  LC  G++D+      +++     P  V +  ++
Sbjct: 946  AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLII 1005

Query: 547  RGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
             G  + ++  + +VL ++M   + +  DL
Sbjct: 1006 NGLGKFHRLEEALVLFNEMKKSRGITPDL 1034



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 150/499 (30%), Positives = 245/499 (49%), Gaps = 39/499 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  MI     P + +++ L+  L K +  ++V+ L K + + GL P+++   + I
Sbjct: 208 EAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICI 267

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L + G  + A+ +L R+      P+ VT+  LI+ LC   ++  A  +F K+      
Sbjct: 268 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHK 327

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++     R+     + + EM  + G +  PDVVT+  ++D LCK G   +A
Sbjct: 328 PDRVTYITLLDRFSDNRDLDSVNQFWSEMEKD-GHV--PDVVTFTILVDALCKAGNFGEA 384

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
              L  M+D+ I PN+ TYN+LICG   V    +A  +F  M   GV+P   T+   I+Y
Sbjct: 385 FAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDY 444

Query: 304 NCKDGKMDKVNRLLELMIQRGVNP-----------------------------------D 328
             K G         E M  +G+ P                                   D
Sbjct: 445 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 504

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           +VTYN +M  +  VG I  A +L   MV   C  DV   N LIN   K  +V++A  ++ 
Sbjct: 505 SVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFM 564

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M   +++P+V+TYNTLL+GL + G + +A++L + M      P++ TF T  D LCKN 
Sbjct: 565 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 624

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            V  A+++   + +  C   + TYN +I GL K G++K A   FH+++ K   PD VT  
Sbjct: 625 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLC 683

Query: 509 TMIHWLCKEGQMDKANDLL 527
           T++  + K G ++ A  ++
Sbjct: 684 TLLPGVVKAGLIEDAYKII 702



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 164/592 (27%), Positives = 264/592 (44%), Gaps = 58/592 (9%)

Query: 32  PKTDLSSHHFKDGTSIAKFLNDRHKS-------------GNITSNEAVYFFDCMIKMKPS 78
           P TD S  +FK   S+A   N  H +             G I   E  Y FD M K    
Sbjct: 98  PDTDSSFSYFK---SVAGNSNLVHTTETCNYMLEALRVDGKI--EEMAYVFDLMQKRIIK 152

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
               ++  +   L+            +++   G   + +  N LI+ L K    + A  V
Sbjct: 153 RDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEV 212

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             R++   F P+  T++ L+ GL     I     L K++      PNV TF   I  L R
Sbjct: 213 YRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGR 272

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A ++ + M +E    C PDVVTY  +ID LC    +D AKE+  +MK     P+
Sbjct: 273 AGKINEAYEILKRMDDEG---CGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPD 329

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +TY +L+  F    D       + EM  +G  PDVVTF  +++  CK G   +    L+
Sbjct: 330 RVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLD 389

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           +M  +G+ P+  TYN+L+ G   V R+  A E+F +M S G +   Y+Y + I+   K  
Sbjct: 390 VMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSG 449

Query: 379 KVEDAVCLYREMLSERIRPSV-----------------------------------ITYN 403
               A+  + +M ++ I P++                                   +TYN
Sbjct: 450 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 509

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            ++    +VG + +A+KL+ +M  N   PD     + I+ L K   V EA ++F  ++  
Sbjct: 510 MMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 569

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           K +  + TYN L+ GL K G+++ A +LF  +  KG  P+ +T +T+   LCK  ++  A
Sbjct: 570 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 629

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
             +L  M    CVP   T+ T++ G V+N +  + +   H+M  +KLV  D 
Sbjct: 630 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM--KKLVYPDF 679



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 253/556 (45%), Gaps = 11/556 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           F++   KSG+  S  A+  F+ M     +P + +    L  LAK  +      +F  L  
Sbjct: 441 FIDYYGKSGDSVS--ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 498

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            GL PD    N+++ C  K+G    A  +L  ++ +C  P+ +  N LIN L    R+ E
Sbjct: 499 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDE 558

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A ++F ++      P VVT+NTL+ GL +      A++LFE MV +    C P+ +T+N+
Sbjct: 559 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG---CPPNTITFNT 615

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           + D LCK+  V  A ++L +M D    P+V TYN++I G       KEA C F   M   
Sbjct: 616 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF-HQMKKL 674

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLE-LMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           V PD VT   ++    K G ++   +++   +      P  + +  LM        I  A
Sbjct: 675 VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNA 734

Query: 349 RELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLL 406
                 +V+ G CR        +I  + K      A  L+ +   +  ++P + TYN L+
Sbjct: 735 VSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLI 794

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL +   +  A  +  +++    +PD  T+   +D   K+G + E  ++++ +   +CE
Sbjct: 795 GGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECE 854

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI-PDVVTCSTMIHWLCKEGQMDKAND 525
               T+N +I+GL K G +  A  L++ L       P   T   +I  L K G++ +A  
Sbjct: 855 PNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 914

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           L   M    C P+   +  L+ GF +  +      L  +M  E  V  DL   S +VD L
Sbjct: 915 LFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG-VRPDLKTYSVLVDCL 973

Query: 586 SKDKKYRECLNQFRHL 601
               +  E L+ FR L
Sbjct: 974 CMVGRVDEGLHYFREL 989



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 146/572 (25%), Positives = 256/572 (44%), Gaps = 77/572 (13%)

Query: 47   IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR 106
            +   +N  +K+  +  +EA   F  M +MK  P + ++  LL  L KN +    + LF+ 
Sbjct: 543  VNSLINTLYKADRV--DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 600

Query: 107  LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
            +   G  P+    N L +CLCK    + A  +L +++     P+  T+N +I GL   G+
Sbjct: 601  MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 660

Query: 167  IMEAARLFKKL-------------------------------------------NVFACD 183
            + EA   F ++                                           N+F  D
Sbjct: 661  VKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWED 720

Query: 184  -----------PNVVTFNT--LINGLCRTRNTLV---------------ALKLFEEMVNE 215
                        N V+F+   + NG+CR  ++++               A  LFE+   +
Sbjct: 721  LMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKD 780

Query: 216  FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
             G   +P + TYN +I GL +   ++ A+++ LQ+K+    P+V TYN L+  +      
Sbjct: 781  LGV--QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKI 838

Query: 276  KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD-KVNRLLELMIQRGVNPDTVTYNS 334
             E   ++ EM  +  +P+ +T N +I+   K G +D  ++   +LM  R  +P   TY  
Sbjct: 839  DELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 898

Query: 335  LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
            L+DG    GR+  A++LF  M   GCR +   YNILIN   K  + + A  L++ M+ E 
Sbjct: 899  LIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 958

Query: 395  IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
            +RP + TY+ L+  L  VG + + L    +++ + + PD   +   I+GL K   + EA+
Sbjct: 959  VRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEAL 1018

Query: 455  QVFQAIRNCK-CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             +F  ++  +     + TYN LI  L   G ++ A K+++ +Q  G  P+V T + +I  
Sbjct: 1019 VLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1078

Query: 514  LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
                G+ + A  +   M      P+  T+  L
Sbjct: 1079 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 237/530 (44%), Gaps = 47/530 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC---KMGITSGA 135
           P + +FTI + +L +  + +    + KR++  G  PD+    +LI+ LC   K+      
Sbjct: 258 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 317

Query: 136 FVVL--GR------------------------------ILRSCFTPNTVTFNFLINGLCA 163
           F  +  GR                              + +    P+ VTF  L++ LC 
Sbjct: 318 FAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCK 377

Query: 164 EGRIMEAARLFKKLNVF---ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
            G   EA   F KL+V       PN+ T+NTLI GL R      AL++F+ M    G   
Sbjct: 378 AGNFGEA---FAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNM-ESLGV-- 431

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           KP   TY   ID   K G    A E   +MK + I PN++  N+ +         +EAK 
Sbjct: 432 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 491

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +F  + D G+ PD VT+N M+    K G++D+  +LL  M++    PD +  NSL++   
Sbjct: 492 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLY 551

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
              R+  A ++F+ M     +  V +YN L+    K+ K+++A+ L+  M+ +   P+ I
Sbjct: 552 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 611

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T+NTL   L +   +  ALK++ KM     VPD FT+ T I GL KNG V EA+  F  +
Sbjct: 612 TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 671

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK-GPIPDVVTCSTMIHWLCKEGQ 519
           +       + T   L+ G+ K G ++ A K+     +     P  +    ++  +  E  
Sbjct: 672 KKLVYPDFV-TLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAG 730

Query: 520 MDKANDLLLDMEAKN-CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +D A      + A   C   +     ++R   ++N  S   +L  K   +
Sbjct: 731 IDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKD 780



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 3/247 (1%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            K+GN+     +Y+ D M     SP   ++  L+  L+K+ +      LF+ ++  G  P+
Sbjct: 869  KAGNVDDALDLYY-DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPN 927

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
              + N+LIN   K G    A  +  R+++    P+  T++ L++ LC  GR+ E    F+
Sbjct: 928  CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFR 987

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +L     +P+VV +N +INGL +      AL LF EM    G    PD+ TYNS+I  L 
Sbjct: 988  ELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRG--ITPDLYTYNSLILNLG 1045

Query: 236  KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
              G V++A ++  +++   + PNV T+N+LI G+      + A  ++  M+  G  P+  
Sbjct: 1046 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1105

Query: 296  TFNAMIN 302
            T+  + N
Sbjct: 1106 TYEQLPN 1112


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 247/470 (52%), Gaps = 8/470 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           SF +LL   A   Q  + +++F  +   G  P L   N L+N L + G    A +V G++
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
             +   P+  T   +    C +GR+ +A    +++     + N+V ++ +++  C    T
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR-NINPNVIT 261
             A ++ E +  +      P+VVTY  ++ G CKDG +++A+ ++ +MK+  +I  + + 
Sbjct: 270 EDARRILESLQRKG---LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y  +I G+C      +A  +  EM D G+  ++  +N MIN  CK G+M++V ++L+ M 
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             G+ PD  +YN+L+DG+C  G + +A E+   MV  G      +YN L+   C    ++
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           DA+ L+  ML   + P+ I+ +TLL GLF+ G    AL L  +     +  +  TF T I
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           +GLCK G + EA ++   ++  +C     TY  L +G CK+G+L TA  L ++++H G  
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFA 566

Query: 502 PDVVTCSTMI--HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           P V   ++ I  H++ K  Q  K ND+  +M A+   P+ VT+  L+ G+
Sbjct: 567 PSVEMFNSFITGHFIAK--QWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 255/524 (48%), Gaps = 39/524 (7%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            L     +G ++S  A+  FD M K+   P + S   LL  L ++        ++ ++  
Sbjct: 154 LLRAHADAGQLSS--ALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRI 211

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ PD F + ++    C+ G  + A   +  +       N V ++ +++  C  G   +
Sbjct: 212 AGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTED 271

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A R+ + L      PNVVT+  L+ G C+      A ++ +EM  E G I   D V Y  
Sbjct: 272 ARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM-KETGDIVV-DEVAYGM 329

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+G C+ G +D A  +  +M+D  I+ N+  YN++I G C +   +E + +  EM D G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++PD  ++N +I+  C++G M K   +  +M++ G+   T+TYN+L+ GFC +  I  A 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            L+  M+ +G   +  S + L++   K  K E A+ L++E L+  +  +VIT+NT+++GL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            ++G + +A +L+D+M+     PDS T+ T  DG CK G +  A  +   + +      +
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 470 E-----------------------------------TYNCLINGLCKMGRLKTACKLFHR 494
           E                                   TY  LI G CK G L  AC L+  
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFE 629

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           + + G  P+V  CS ++    KEG++D+AN +L  +   + +P 
Sbjct: 630 MVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG 673



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 246/522 (47%), Gaps = 29/522 (5%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   S+  L+    +         + + +  NGL       N L+   C +     A  +
Sbjct: 392 PDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRL 451

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +L+    PN ++ + L++GL   G+  +A  L+K+        NV+TFNT+INGLC+
Sbjct: 452 WFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCK 511

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A +L + M       C PD +TY ++ DG CK G +  A  L+ +M+     P+
Sbjct: 512 IGRMAEAEELLDRMKE---LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPS 568

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V  +NS I G      W +   +  EM   G+ P++VT+ A+I   CK+G + +   L  
Sbjct: 569 VEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYF 628

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF-------------------------V 353
            M+  G+NP+    ++LM  F   G++  A  +                          V
Sbjct: 629 EMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVV 688

Query: 354 SMVSKGCRHDV-YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             ++ G  H     +N++I   CK  ++ DA  L+  + ++R  P   TY++L+ G    
Sbjct: 689 DTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAAS 748

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G++ +A  L D M    + P+  T+ + I GLCK+G +  AV +F  +++        TY
Sbjct: 749 GSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITY 808

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI+  CK G+   A KL  ++  +G  P V+T S +I+ LC +G M++A  LL  M  
Sbjct: 809 NTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIE 868

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
            N  P+ +T+CTL+ G++++    ++  L  +M    L+ ++
Sbjct: 869 NNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTN 910



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 258/508 (50%), Gaps = 29/508 (5%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  ++  L K  + + V  + + +   G+ PD +  N LI+  C+ G    AF +   ++
Sbjct: 362 YNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV 421

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R+     T+T+N L+ G C+   I +A RL+  +      PN ++ +TL++GL +   T 
Sbjct: 422 RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTE 481

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            AL L++E +    A    +V+T+N++I+GLCK G + +A+ELL +MK+    P+ +TY 
Sbjct: 482 QALNLWKETLARGLA---KNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYR 538

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +L  G+C +     A  L  +M   G  P V  FN+ I  +    +  KVN +   M  R
Sbjct: 539 TLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G++P+ VTY +L+ G+C  G +  A  L+  MV+ G   +V+  + L++   K+ KV++A
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA 658

Query: 384 VCLYREMLSERIRPSV--------------------------ITYNTLLSGLFQVGNLGD 417
             + +++++  + P                            + +N ++ GL + G + D
Sbjct: 659 NLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIAD 718

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A  L + ++    +PD+FT+++ I G   +G + EA  +   + +      I TYN LI 
Sbjct: 719 AKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIY 778

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           GLCK G+L  A  LF++LQ KG  P+ +T +T+I   CKEG+  +A  L   M  +   P
Sbjct: 779 GLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQP 838

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           + +T+  L+ G        + + LL +M
Sbjct: 839 TVITYSILIYGLCTQGYMEEAIKLLDQM 866



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 254/520 (48%), Gaps = 42/520 (8%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKN----KQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           M +M    G+ + T+    L K        D  + L+  +   G+ P+    + L++ L 
Sbjct: 416 MCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLF 475

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G T  A  +    L      N +TFN +INGLC  GR+ EA  L  ++    C P+ +
Sbjct: 476 KAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSL 535

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+ TL +G C+      A  L  +M +   A   P V  +NS I G        K  ++ 
Sbjct: 536 TYRTLFDGYCKLGQLGTATHLMNKMEHLGFA---PSVEMFNSFITGHFIAKQWHKVNDIH 592

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M  R ++PN++TY +LI G+C   +  EA  L+ EM++NG+ P+V   +A+++   K+
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKE 652

Query: 308 GKMDKVNRLLELMIQRGVNP----------------DTVT----------YNSLMDGFCL 341
           GK+D+ N +L+ ++   + P                DT+           +N ++ G C 
Sbjct: 653 GKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCK 712

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            GRI+ A+ LF S+ +K    D ++Y+ LI+       +++A  L   MLS  + P++IT
Sbjct: 713 SGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIIT 772

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN+L+ GL + G L  A+ L +K+Q   + P+  T+ T ID  CK G   EA ++ Q + 
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +  + TY+ LI GLC  G ++ A KL  ++      P+ +T  T+IH   K G M+
Sbjct: 833 EEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNME 892

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           + + L  +M  +  +P+          ++ N K+S  VV+
Sbjct: 893 EISKLYDEMHIRGLLPTN---------WIGNWKRSDPVVV 923



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 157/614 (25%), Positives = 271/614 (44%), Gaps = 101/614 (16%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +  I+     ++ +    V   + +   GL  +L   + +++C C MG T  A  +
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV------------------- 179
           L  + R   +PN VT+  L+ G C +GR+ EA R+ K++                     
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335

Query: 180 -----------------FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
                                 N+  +NT+INGLC+        K+ +EM  + G   +P
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM-EDVGM--RP 392

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D  +YN++IDG C++G + KA E+   M    +    +TYN+L+ GFC +    +A  L+
Sbjct: 393 DKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW 452

Query: 283 IEMMDNGVQPD-----------------------------------VVTFNAMINYNCKD 307
             M+  GV P+                                   V+TFN +IN  CK 
Sbjct: 453 FLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKI 512

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G+M +   LL+ M +    PD++TY +L DG+C +G++  A  L   M   G    V  +
Sbjct: 513 GRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N  I  +   ++      ++ EM +  + P+++TY  L++G  + GNL +A  L  +M  
Sbjct: 573 NSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN 632

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC--------------KCELRIET-- 471
           N + P+ F  +  +    K G V EA  V Q + N               K    ++T  
Sbjct: 633 NGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIA 692

Query: 472 ----------YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                     +N +I GLCK GR+  A  LF  L++K  +PD  T S++IH     G +D
Sbjct: 693 DGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSID 752

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A  L   M +    P+ +T+ +L+ G  ++ K S+ V L +K+ ++ +  + ++ ++ +
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT-L 811

Query: 582 VDLLSKDKKYRECL 595
           +D   K+ K  E  
Sbjct: 812 IDEYCKEGKTTEAF 825



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 130/254 (51%), Gaps = 16/254 (6%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           +  D +    P      + +++  L K+ +     SLF+ L +    PD F  + LI+  
Sbjct: 686 HVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
              G    AF +   +L +  TPN +T+N LI GLC  G++  A  LF KL      PN 
Sbjct: 746 AASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           +T+NTLI+  C+   T  A KL ++MV E     +P V+TY+ +I GLC  G++++A +L
Sbjct: 806 ITYNTLIDEYCKEGKTTEAFKLKQKMVEEG---IQPTVITYSILIYGLCTQGYMEEAIKL 862

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP----------DVVT 296
           L QM + N++PN ITY +LI G+    + +E   L+ EM   G+ P          D V 
Sbjct: 863 LDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNWKRSDPVV 922

Query: 297 FNAMINYNCKDGKM 310
            N   N+N KDG M
Sbjct: 923 VN---NWNRKDGHM 933



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/431 (23%), Positives = 198/431 (45%), Gaps = 13/431 (3%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLF-------EEMVNEFGAICKP---DVVTYNSIIDG 233
           P++V+   L++ L R R    A  L        E +      + +      V+++ ++  
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
               G +  A  +   M      P++ + N L+       D   A  ++ +M   GV PD
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
             T   M    C+DG++ +    +E M   G+  + V Y+++MD +C +G    AR +  
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM-LSERIRPSVITYNTLLSGLFQV 412
           S+  KG   +V +Y +L+   CKD ++E+A  + +EM  +  I    + Y  +++G  Q 
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G + DA ++ ++M+   +  + F + T I+GLCK G + E  +V Q + +        +Y
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI+G C+ G ++ A ++   +   G     +T +T++   C    +D A  L   M  
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL--LSKDKK 590
           +   P+E++  TLL G  +  K  + + L  +  A  L  + ++ ++ +  L  + +  +
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAE 517

Query: 591 YRECLNQFRHL 601
             E L++ + L
Sbjct: 518 AEELLDRMKEL 528



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 185/399 (46%), Gaps = 15/399 (3%)

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD-------------RNINPNVITYNS 264
           A  +P +V++  ++  L +      A+ LL  +               R+   + ++++ 
Sbjct: 94  APSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDL 153

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+           A  +F  M   G +P + + N ++N   + G       +   M   G
Sbjct: 154 LLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAG 213

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           V PD  T   +   +C  GR+++A E    M   G   ++ +Y+ +++  C     EDA 
Sbjct: 214 VLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDAR 273

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTFATYIDG 443
            +   +  + + P+V+TY  L+ G  + G + +A +++ +M +  D+V D   +   I+G
Sbjct: 274 RILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING 333

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C+ G + +A +V   +R+    + +  YN +INGLCK+GR++   K+   ++  G  PD
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
             + +T+I   C+EG M KA ++   M       + +T+ TLL+GF   +     + L  
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            M    +  +++S S+ ++D L K  K  + LN ++  L
Sbjct: 454 LMLKRGVAPNEISCST-LLDGLFKAGKTEQALNLWKETL 491



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 6/193 (3%)

Query: 24  CSFGRPPNPKTDLSS----HHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           C  GR  + K+   S        D  + +  ++    SG+I  +EA    D M+    +P
Sbjct: 711 CKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSI--DEAFSLRDVMLSAGLTP 768

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
            + ++  L+  L K+ +    V+LF +L S G+ P+    N LI+  CK G T+ AF + 
Sbjct: 769 NIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLK 828

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
            +++     P  +T++ LI GLC +G + EA +L  ++     DPN +T+ TLI+G  ++
Sbjct: 829 QKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKS 888

Query: 200 RNTLVALKLFEEM 212
            N     KL++EM
Sbjct: 889 GNMEEISKLYDEM 901


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 156/499 (31%), Positives = 238/499 (47%), Gaps = 11/499 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +   +A   FD M +    P + ++  ++   +K  + +  + + + +  NG  PD
Sbjct: 300 KSGRV--GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +  N LI  LC    T  A  +L   ++  FTP  VTF  LING C   +  +A R+  
Sbjct: 358 DWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 416

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA-ICKPDVVTYNSIIDGL 234
           K+    C  ++  F  LIN L +       LK  +E++NE  A    P+V+TY SIIDG 
Sbjct: 417 KMMSSKCKLDLQVFGKLINSLIKKDR----LKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK G VD A E+L  M+     PN  TYNSL+ G        +A  L  +M  +G+ P+V
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +T+  ++   C +   D   RL E+M Q G+ PD   Y  L D  C  GR   A E +  
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSF 589

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           +V KG       Y  LI+   K    + A  L   M+ E   P   TY+ LL  L +   
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +AL ++D+M L  +    F +   ID + + G    A +++  + +   +    TY  
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 709

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
            IN  CK GRL+ A  L  +++ +G  PDVVT + +I      G +D+A   L  M   +
Sbjct: 710 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGAS 769

Query: 535 CVPSEVTFCTLLRGFVQNN 553
           C P+  T+C LL+  ++ N
Sbjct: 770 CEPNYWTYCLLLKHLLKGN 788



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 250/512 (48%), Gaps = 9/512 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G++T+  A  +F  +++    P   +   L+    +  +      LF  +   G   +
Sbjct: 195 KEGDLTT--AHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRN 252

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +   +LI  LC       A V+   + R   +PN   F FLI+GLC  GR+ +A  LF 
Sbjct: 253 EYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFD 312

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      P+V+T+N +I G  +      ALK+ +E++ + G  C PD  TYN++I GLC
Sbjct: 313 AMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG--CHPDDWTYNTLIYGLC 369

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            D   ++A+ELL         P V+T+ +LI G+C  + + +A  +  +MM +  + D+ 
Sbjct: 370 -DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 428

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            F  +IN   K  ++ +   LL  +   G+ P+ +TY S++DG+C  G++  A E+   M
Sbjct: 429 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 488

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              GC+ + ++YN L+    KD+K+  A+ L  +M  + I P+VITY TLL G     + 
Sbjct: 489 ERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDF 548

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A +L + M+ N + PD   +A   D LCK G    A + +  I      L    Y  L
Sbjct: 549 DNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTL 605

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+G  K G    A  L  R+  +G  PD  T S ++H LCK+ ++++A  +L  M  +  
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
             +   +  L+   ++  K      + ++M +
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 211/481 (43%), Gaps = 22/481 (4%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   ++  L+  L K+K+    ++L  ++  +G+ P++     L+   C       AF 
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 553

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   + ++   P+   +  L + LC  GR  EA     +  V       V + TLI+G  
Sbjct: 554 LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTK---VYYTTLIDGFS 610

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  NT  A  L E M++E    C PD  TY+ ++  LCK   +++A  +L QM  R I  
Sbjct: 611 KAGNTDFAATLIERMIDEG---CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
            +  Y  LI           AK ++ EM  +G +P   T+   IN  CK+G+++    L+
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + GV PD VTYN L+DG   +G I RA      MV   C  + ++Y +L+    K 
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 787

Query: 378 Q----------------KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
                            +++    L   M+   + P+V TY++L++G  + G L +A  L
Sbjct: 788 NLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 847

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +D M    + P+   +   I   C   F  +A+     +  C  + ++E+Y  L+ GLC 
Sbjct: 848 LDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 907

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G  +    LF  L   G   D V    +   L K G +D    +L  ME + C  S  T
Sbjct: 908 EGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQT 967

Query: 542 F 542
           +
Sbjct: 968 Y 968



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 177/360 (49%), Gaps = 69/360 (19%)

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           ++ +++ +G+ PD VT+N MI   CK+G +   +R   L+++ G+ P+T T N+L+ G+C
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 229

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNI------------------------------- 369
             G + +A  LF+ M   GC+ + YSY I                               
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 289

Query: 370 ----LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
               LI+  CK  +V DA  L+  M    + PSV+TYN ++ G  ++G + DALK+ + M
Sbjct: 290 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 349

Query: 426 QLNDVVPDSFTFATYIDGLC---------------KNGFVL------------------- 451
           + N   PD +T+ T I GLC               K GF                     
Sbjct: 350 EKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A+++   + + KC+L ++ +  LIN L K  RLK A +L + +   G +P+V+T +++I
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 469

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
              CK G++D A ++L  ME   C P+  T+ +L+ G V++ K  K + LL KM  + ++
Sbjct: 470 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 529



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 189/427 (44%), Gaps = 74/427 (17%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N  +  L R   T    +++ ++V + G +  PD VTYN++I   CK+G +  A     
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQD-GLL--PDTVTYNTMIKSYCKEGDLTTAHRYFR 207

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWK-----------------------------EAK 279
            + +  + P   T N+L+ G+C   + +                             +AK
Sbjct: 208 LLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAK 267

Query: 280 C------LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           C      LF+ M  +G  P+V  F  +I+  CK G++     L + M Q GV P  +TYN
Sbjct: 268 CVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYN 327

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +++ G+  +GR++ A ++   M   GC  D ++YN LI   C DQK E+A  L    + E
Sbjct: 328 AMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKE 386

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKM---------------------------- 425
              P+V+T+  L++G        DAL++ +KM                            
Sbjct: 387 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 446

Query: 426 -------QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
                    N +VP+  T+ + IDG CK+G V  A++V + +    C+    TYN L+ G
Sbjct: 447 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 506

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L K  +L  A  L  ++Q  G IP+V+T +T++   C E   D A  L   ME     P 
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 566

Query: 539 EVTFCTL 545
           E  +  L
Sbjct: 567 EHAYAVL 573



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 191/450 (42%), Gaps = 53/450 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF-- 136
           P + ++T LL        +D    LF+ +  NGL PD     +L + LCK G    A+  
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 137 ------------------------------VVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
                                          ++ R++    TP++ T++ L++ LC + R
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           + EA  +  ++++      +  +  LI+ + R      A +++ EM +      KP   T
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH---KPSATT 706

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y   I+  CK+G ++ A++L+L+M+   + P+V+TYN LI G   +     A      M+
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766

Query: 287 DNGVQPDVVTFNAMINYNCKDG----------------KMDKVNRLLELMIQRGVNPDTV 330
               +P+  T+  ++ +  K                  ++D   +LLE M++ G+NP   
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TY+SL+ GFC  GR+  A  L   M  KG   +   Y +LI   C  +  E A+     M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLI-DKMQLNDVVPDSFTFATYIDGLCKNGF 449
                +P + +Y  L+ GL   G+      L  D ++L     D   +    DGL K G+
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG-YNHDEVAWKILNDGLLKAGY 945

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           V    Q+   +    C +  +TY  + N +
Sbjct: 946 VDICFQMLSIMEKRYCCISSQTYALVTNKM 975



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 147/331 (44%), Gaps = 21/331 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN  ++ A    + MI    +P   ++++LL  L K K+ +  + +  +++  G+   
Sbjct: 611 KAGN--TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F   +LI+ + + G    A  +   +  S   P+  T+   IN  C EGR+ +A  L  
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+      P+VVT+N LI+G         A    + MV   GA C+P+  TY  ++  L 
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV---GASCEPNYWTYCLLLKHLL 785

Query: 236 KDGF----------------VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           K                   +D   +LL +M    +NP V TY+SLI GFC     +EA 
Sbjct: 786 KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 845

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L   M   G+ P+   +  +I   C     +K    + +M + G  P   +Y  L+ G 
Sbjct: 846 LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGL 905

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           C  G   + + LF  ++  G  HD  ++ IL
Sbjct: 906 CNEGDFEKVKSLFCDLLELGYNHDEVAWKIL 936



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 21/327 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+   D M        + ++TIL+  + +  ++D    ++  + S+G  P      + 
Sbjct: 651 NEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVF 710

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G    A  ++ ++ R    P+ VT+N LI+G    G I  A    K++   +C
Sbjct: 711 INSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASC 770

Query: 183 DPNVVTFNTLINGL-------CRTRNTL---------VALKLFEEMVNEFGAICKPDVVT 226
           +PN  T+  L+  L        R+ +T          +  +L E MV        P V T
Sbjct: 771 EPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHG---LNPTVTT 827

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+S+I G CK G +++A  LL  M  + ++PN   Y  LI   CC   + E    F+ +M
Sbjct: 828 YSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI-KCCCDTKFFEKALSFVSIM 886

Query: 287 DN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
              G QP + ++  ++   C +G  +KV  L   +++ G N D V +  L DG    G +
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 946

Query: 346 SRARELFVSMVSKGCRHDVYSYNILIN 372
               ++   M  + C     +Y ++ N
Sbjct: 947 DICFQMLSIMEKRYCCISSQTYALVTN 973



 Score = 42.0 bits (97), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 49/114 (42%)

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A+Q  +   + +  L  + YN  +  L +    +   +++ +L   G +PD VT +TMI
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
              CKEG +  A+     +      P   T   L+ G+ +  +  K   L   M
Sbjct: 191 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 263/506 (51%), Gaps = 13/506 (2%)

Query: 32  PKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTML 91
           P      + F+D T+  K LN   KS     +E++YF   M+     P +   T L+   
Sbjct: 66  PTKHDQDYDFRD-TNFMKTLNRSCKSAKY--DESLYFLQHMVNRGYKPDVILCTKLIKGF 122

Query: 92  AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
              K+ +  + + + L  +G  PD+F  N +I+  CK      A  VL R+ +  F P+ 
Sbjct: 123 FNMKKIEKAIQVMEILEKHGK-PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDV 181

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           VT+N LI   C  GR+  A R+  +L    C P V+T+  LI           A+KL +E
Sbjct: 182 VTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDE 241

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M++      +PD  TYN +++G+CK+G +D+A E L ++        V TYN L+     
Sbjct: 242 MLSRG---LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLN 298

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
              W+  + L  +M+  G +P+ +T++ +I   C+DGK+D+   +L++M ++ + PD  +
Sbjct: 299 EGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYS 358

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y+ L+   C  G++  A E    M+S G   D+ SYN ++ + CK+   ++A+ ++ ++ 
Sbjct: 359 YDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLG 418

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
                P+  +YNTL   L+  G+   AL +I +M  N + PD  T+ + I  LC++G V 
Sbjct: 419 EVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVD 478

Query: 452 EAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
           +A+++      + KC+  + +YN ++ GLCK+ R+  A ++   + ++G +P+  T + +
Sbjct: 479 QAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLL 538

Query: 511 IHWLCKEG----QMDKANDLLLDMEA 532
           I  +   G     M+ AN LL++M+A
Sbjct: 539 IQGIGFAGWRYDAMELAN-LLVNMDA 563



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 222/453 (49%), Gaps = 44/453 (9%)

Query: 155 NFL--INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           NF+  +N  C   +  E+    + +      P+V+    LI G    +    A+++ E +
Sbjct: 79  NFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVME-I 137

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           + + G   KPDV  YN++I G CK   VD A ++L +MK R   P+V+TYN LI  FC  
Sbjct: 138 LEKHG---KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGR 194

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                A  +  +++ +  +P V+T+  +I      G +D+  +LL+ M+ RG+ PD  TY
Sbjct: 195 GRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTY 254

Query: 333 NSLMDGFCLVGRISRARELFVSMVSK-GCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           N +++G C  G + RA E F+S +SK GC   V +YNIL+     + K E    L  +ML
Sbjct: 255 NVVVNGMCKEGMLDRAFE-FLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDML 313

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
            +   P+ ITY+TL++ L + G + +A  ++  M+   + PD +++   I  LC+ G V 
Sbjct: 314 VKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVD 373

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH-------------- 497
            A++    + +      I +YN ++  LCK G    A  +F +L                
Sbjct: 374 LAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLF 433

Query: 498 ---------------------KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM-EAKNC 535
                                 G  PD +T +++I  LC++G +D+A +LL+DM E++ C
Sbjct: 434 GALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKC 493

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            P+ +++ T+L G  +  +    + +L  M  E
Sbjct: 494 QPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNE 526



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 212/462 (45%), Gaps = 40/462 (8%)

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N  CK      +   L  ++   + P+ +    LI G     +I +A ++ + L     
Sbjct: 84  LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG- 142

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V  +N +I+G C+      A K+ + M        +PDVVTYN +I   C  G +D 
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRG---FEPDVVTYNILIGNFCGRGRLDL 199

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  ++ Q+   N  P VITY  LI          EA  L  EM+  G++PD  T+N ++N
Sbjct: 200 ALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVN 259

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+G +D+    L  + + G      TYN L+      G+     +L   M+ KGC  
Sbjct: 260 GMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEP 319

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  +Y+ LI A C+D K+++A  + + M  + + P   +Y+ L+S L + G +  A++ +
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFL 379

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D M     +PD  ++ + +  LCKNG   EA+ +F+ +    C     +YN L   L   
Sbjct: 380 DDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSS 439

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM-EAK-------- 533
           G    A  +   +   G  PD +T +++I  LC++G +D+A +LL+DM E++        
Sbjct: 440 GDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVIS 499

Query: 534 ---------------------------NCVPSEVTFCTLLRG 548
                                       C+P+E T+  L++G
Sbjct: 500 YNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQG 541



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 193/374 (51%), Gaps = 7/374 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+   D ++K    P + ++TIL+         D  + L   + S GL PD +  N+++N
Sbjct: 200 ALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVN 259

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            +CK G+   AF  L RI ++       T+N L+  L  EG+     +L   + V  C+P
Sbjct: 260 GMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEP 319

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N +T++TLI  LCR      A  + + M  +  A   PD  +Y+ +I  LC++G VD A 
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALA---PDGYSYDPLISALCREGKVDLAI 376

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E L  M      P++++YNS++   C   +  EA  +F ++ + G  P+  ++N +    
Sbjct: 377 EFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGAL 436

Query: 305 CKDG-KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGCRH 362
              G K+  +  +LE M+  G++PD +TYNSL+   C  G + +A EL V M  S+ C+ 
Sbjct: 437 WSSGDKIRALGMILE-MLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQP 495

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V SYN ++   CK Q++ DA+ +   M++E   P+  TY  L+ G+   G   DA++L 
Sbjct: 496 TVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELA 555

Query: 423 DKM-QLNDVVPDSF 435
           + +  ++ +  DSF
Sbjct: 556 NLLVNMDAISEDSF 569



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 194/391 (49%), Gaps = 4/391 (1%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           F   +N  C++     +L   + MVN      KPDV+    +I G      ++KA +++ 
Sbjct: 80  FMKTLNRSCKSAKYDESLYFLQHMVNRG---YKPDVILCTKLIKGFFNMKKIEKAIQVM- 135

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           ++ +++  P+V  YN++I GFC  D    A  +   M   G +PDVVT+N +I   C  G
Sbjct: 136 EILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRG 195

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++D   R+++ +++    P  +TY  L++     G I  A +L   M+S+G R D Y+YN
Sbjct: 196 RLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYN 255

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           +++N  CK+  ++ A      +        V TYN LL  L   G      KL+  M + 
Sbjct: 256 VVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVK 315

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
              P+  T++T I  LC++G + EA  V + ++         +Y+ LI+ LC+ G++  A
Sbjct: 316 GCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLA 375

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +    +   G +PD+++ ++++  LCK G  D+A ++   +    C P+  ++ TL   
Sbjct: 376 IEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGA 435

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
              +  K + + ++ +M +  +   +++ +S
Sbjct: 436 LWSSGDKIRALGMILEMLSNGIDPDEITYNS 466



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 170/334 (50%), Gaps = 6/334 (1%)

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN--YNCKDGKMDKVNRLLELMIQRGVNP 327
           C    + E+      M++ G +PDV+    +I   +N K  K++K  +++E++ + G  P
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMK--KIEKAIQVMEILEKHG-KP 144

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D   YN+++ GFC   R+  A ++   M  +G   DV +YNILI   C   +++ A+ + 
Sbjct: 145 DVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVM 204

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            ++L +  +P+VITY  L+      G + +A+KL+D+M    + PD +T+   ++G+CK 
Sbjct: 205 DQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKE 264

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G +  A +    I    C   + TYN L+  L   G+ +   KL   +  KG  P+ +T 
Sbjct: 265 GMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITY 324

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           ST+I  LC++G++D+A ++L  M+ K   P   ++  L+    +  K    +  L  M +
Sbjct: 325 STLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMIS 384

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              +   LS +S ++  L K+    E LN F  L
Sbjct: 385 GGHLPDILSYNS-ILASLCKNGNADEALNIFEKL 417


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/507 (30%), Positives = 262/507 (51%), Gaps = 28/507 (5%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P   + + LL  L  NK++D    L   +  +G  P+     ++I+ LC+ G+   A  
Sbjct: 200 APNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMG 259

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VL ++ +   T   + +N +I+ L   GR+ EA  LF ++    C P++ ++NT++ GLC
Sbjct: 260 VLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQM---PCKPDIFSYNTVMKGLC 316

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R      A  L   MV +    C PD VT+N++I  LC  G VD A E++ QM      P
Sbjct: 317 RDGRWEDAGTLIAGMVRK---DCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKP 373

Query: 258 NVITYNSLICGFC---CVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKV 313
           +  TY++L+       CVDD        +E++     +P+ V + +++   C+  + D V
Sbjct: 374 DNFTYSALVNALSERGCVDD-------ALELLRTIPWKPNTVCYRSVLKGLCRADRWDDV 426

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
            +L+  MI+  +N D VT+  ++D  C  G +    E+   M   GC  D+  YN LIN 
Sbjct: 427 GKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLING 486

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             ++  V+DA+ L++ M  +R   +V+TYN +L GL +     DA KL+ +M  ++ +P+
Sbjct: 487 FSENGSVDDALELFKNMSCKR---NVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPN 543

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             TF+T I  LC+ GFV  A++VF+ +    C   +  Y+ LINGL     +  A KL +
Sbjct: 544 EVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLN 603

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL-----RG 548
            +  K   PD +  S  +  LC+  + + A +L+L+M  KNC+P EVTF  L+     +G
Sbjct: 604 DMPCK---PDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKG 660

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           F+++  +   ++L ++      + S L
Sbjct: 661 FLESATEVSELMLKYECMPNVFIYSSL 687



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 216/434 (49%), Gaps = 19/434 (4%)

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +R    P  V    LI  LCA GR+ +A R+    +  A   + VT NTL+ G CR    
Sbjct: 94  MRDPERPAAVPCTLLIKKLCAAGRLDDAERVLGA-SERAGTADAVTRNTLVAGYCRAGGR 152

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           L      E M+         DVVTYN+++ G C++G ++ A+ L+  M      PN  T 
Sbjct: 153 LADA---ERMLASLALSGSADVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTN 206

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           ++L+ G C   +W +A+ L  EM+ +G  P+ +TF  +I+  C++G  D+   +L+ M +
Sbjct: 207 STLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSK 266

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
                  + YN ++     +GR+  A  LF  M    C+ D++SYN ++   C+D + ED
Sbjct: 267 CRCTRGVIVYNEIISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWED 323

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L   M+ +   P  +T+NT++S L   G +  A++++++M      PD+FT++  ++
Sbjct: 324 AGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVN 383

Query: 443 GLCKNGFVLEAVQVFQAI---RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            L + G V +A+++ + I    N  C      Y  ++ GLC+  R     KL   +    
Sbjct: 384 ALSERGCVDDALELLRTIPWKPNTVC------YRSVLKGLCRADRWDDVGKLVAEMIRNQ 437

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
              D VT   +I  LC++G +D   ++L +M    C P  + + +L+ GF +N      +
Sbjct: 438 LNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDAL 497

Query: 560 VLLHKMAAEKLVVS 573
            L   M+ ++ VV+
Sbjct: 498 ELFKNMSCKRNVVT 511



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 186/411 (45%), Gaps = 70/411 (17%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    +  +L  L +  ++D V  L   +  N L  D     L+I+CLC+ G+      V
Sbjct: 405 PNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEV 464

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  + +   +P+ + +N LING    G + +A  LFK +   +C  NVVT+N ++ GLCR
Sbjct: 465 LREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCR 521

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A KL  EMV +    C P+ VT++++I  LC+ GFV+ A E+  +M   N  PN
Sbjct: 522 AEQWEDAGKLVAEMVKDE---CLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPN 578

Query: 259 VITYNSLICGFC---CVDD-----------------------------WKEAKCLFIEMM 286
           VI Y++LI G     CVDD                             W++A  L +EM+
Sbjct: 579 VIIYSTLINGLSDQECVDDALKLLNDMPCKPDTICYSAALKGLCRAERWEDAGELILEMI 638

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR----------------------- 323
                PD VTF+ +IN  C  G ++    + ELM++                        
Sbjct: 639 RKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAE 698

Query: 324 ---------GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
                       PDT+ Y++ + G C   R   AREL   M  K C  D  ++++LI + 
Sbjct: 699 DALQLLRNMPCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSL 758

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           C++  V+ A  ++ +M      P+   +++L++G  +   + + LKL+  M
Sbjct: 759 CQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 141/274 (51%), Gaps = 14/274 (5%)

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
           +E M +  +P  V    +I   C  G++D   R+L    +R    D VT N+L+ G+C  
Sbjct: 91  VESMRDPERPAAVPCTLLIKKLCAAGRLDDAERVLGAS-ERAGTADAVTRNTLVAGYCRA 149

Query: 343 G-RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           G R++ A  +  S+   G   DV +YN L+   C++ ++ DA  L  +M      P+  T
Sbjct: 150 GGRLADAERMLASLALSG-SADVVTYNTLVAGYCREGRLNDARRLVADM---PFAPNSYT 205

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
            +TLL GL       DA +L+ +M  +   P+  TF   I  LC+NG    A+ V   + 
Sbjct: 206 NSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMS 265

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
            C+C   +  YN +I+ L ++GR++ A  LF ++  K   PD+ + +T++  LC++G+ +
Sbjct: 266 KCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCK---PDIFSYNTVMKGLCRDGRWE 322

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLL-----RGFV 550
            A  L+  M  K+C P EVTF T++     RG V
Sbjct: 323 DAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLV 356



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 6/148 (4%)

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG-RLKTACK 490
           P +      I  LC  G + +A +V  A         + T N L+ G C+ G RL  A +
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAV-TRNTLVAGYCRAGGRLADAER 158

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           +   L   G   DVVT +T++   C+EG+++ A  L+ DM      P+  T  TLL+G  
Sbjct: 159 MLASLALSGSA-DVVTYNTLVAGYCREGRLNDARRLVADMPF---APNSYTNSTLLKGLC 214

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            N +      LL +M       +DL+  
Sbjct: 215 SNKEWDDAEELLSEMIRSGCPPNDLTFG 242


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 243/472 (51%), Gaps = 11/472 (2%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +LLT  A  + + T + L+ R+ S  L      L+ L++ L     ++ AF +   + R 
Sbjct: 53  LLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALP----SAPAFALFADMFRL 108

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
                T TFN ++  LC+ G+   A  L +++      PN VT+NT+I G C       A
Sbjct: 109 RLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAA 164

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVITYNS 264
           L +  EM  E G I  P+  TY ++I G CK G VD+A ++  +M  +  + P  + YN+
Sbjct: 165 LDIMREM-RERGGIA-PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 222

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI G+C       A      M++ GV   V T+N +++    DG+  +   L+E M  +G
Sbjct: 223 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 282

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PD  TYN L++G C  G + +A E+F +M  +G R  V +Y  LI A  K  +V++  
Sbjct: 283 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 342

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ E +   IRP ++ YN L++     GN+  A +++ +M+   + PD  T+ T + GL
Sbjct: 343 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 402

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G V EA ++   +     +  + TYN LI+G    G +K A ++ + + +KG  P +
Sbjct: 403 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 462

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
           +T + +I  LCK GQ D A +++ +M      P + T+ +L+ G    ++++
Sbjct: 463 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 514



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 246/501 (49%), Gaps = 18/501 (3%)

Query: 97  YDTVVSLFKRLNSNGLFPDL-----FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
           + +V+S  K L+   + P L      + NLL+     +   + +  +  R+       +T
Sbjct: 24  FKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIST 83

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            + + L++ L +       A +F+ L +  C     TFN ++  LC       AL+L  +
Sbjct: 84  ASLHPLLSALPSAPAFALFADMFR-LRLPLC---TTTFNIMLRHLCSAGKPARALELLRQ 139

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVITYNSLICGFC 270
           M        +P+ VTYN++I G C  G V  A +++ +M++R  I PN  TY ++I G+C
Sbjct: 140 M-------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 192

Query: 271 CVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
            V    EA  +F EM+  G V+P+ V +NA+I   C  GK+D      + M++RGV    
Sbjct: 193 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 252

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN L+    + GR + A EL   M  KG   DV++YNILIN +CK+  V+ A+ ++  
Sbjct: 253 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 312

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +R +V+TY  L+  L + G + +  KL D+     + PD   +   I+    +G 
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           +  A ++   +   +      TYN L+ GLC +GR+  A KL   +  +G  PD+VT +T
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I     +G +  A  +  +M  K   P+ +T+  L++G  +N +      ++ +M    
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492

Query: 570 LVVSDLSLSSKVVDLLSKDKK 590
           +   D +  S +  L ++D++
Sbjct: 493 ITPDDSTYISLIEGLTTEDER 513



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 193/376 (51%), Gaps = 5/376 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMG 130
           +++  P P   ++  ++       +    + + + +    G+ P+ +    +I+  CK+G
Sbjct: 136 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 195

Query: 131 ITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
               A  V   +L +    P  V +N LI G C +G++  A     ++        V T+
Sbjct: 196 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 255

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N L++ L        A +L EEM    G    PDV TYN +I+G CK+G V KA E+   
Sbjct: 256 NLLVHALFMDGRGTEAYELVEEM---GGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 312

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  R +   V+TY +LI         +E   LF E +  G++PD+V +NA+IN +   G 
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+   ++  M ++ + PD VTYN+LM G CL+GR+  AR+L   M  +G + D+ +YN 
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+       V+DA+ +  EM+++   P+++TYN L+ GL + G   DA  ++ +M  N 
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492

Query: 430 VVPDSFTFATYIDGLC 445
           + PD  T+ + I+GL 
Sbjct: 493 ITPDDSTYISLIEGLT 508



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 152/278 (54%), Gaps = 3/278 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ + D M++   +  + ++ +L+  L  + +      L + +   GL PD+F  N+L
Sbjct: 234 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 293

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G    A  +   + R       VT+  LI  L  +G++ E  +LF +      
Sbjct: 294 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 353

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++V +N LIN    + N   A ++  EM  +  A   PD VTYN+++ GLC  G VD+
Sbjct: 354 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA---PDDVTYNTLMRGLCLLGRVDE 410

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++L+ +M +R I P+++TYN+LI G+    D K+A  +  EMM+ G  P ++T+NA+I 
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
             CK+G+ D    +++ M++ G+ PD  TY SL++G  
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 508



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 162/322 (50%), Gaps = 5/322 (1%)

Query: 63  NEAVYFFDCMI-KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +EAV  FD M+ K +  P    +  L+       + DT +    R+   G+   +   NL
Sbjct: 198 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 257

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++ L   G  + A+ ++  +      P+  T+N LING C EG + +A  +F+ ++   
Sbjct: 258 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 317

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
               VVT+  LI  L +        KLF+E V       +PD+V YN++I+     G +D
Sbjct: 318 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG---IRPDLVLYNALINSHSTSGNID 374

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A E++ +M+ + I P+ +TYN+L+ G C +    EA+ L  EM + G+QPD+VT+N +I
Sbjct: 375 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 434

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +     G +    R+   M+ +G NP  +TYN+L+ G C  G+   A  +   MV  G  
Sbjct: 435 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 494

Query: 362 HDVYSYNILINA-NCKDQKVED 382
            D  +Y  LI     +D++  D
Sbjct: 495 PDDSTYISLIEGLTTEDERAID 516



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 119/225 (52%), Gaps = 5/225 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K GN+   +A+  F+ M +      + ++T L+  L+K  Q      LF     
Sbjct: 293 LINGHCKEGNV--KKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ PDL + N LIN     G    AF ++G + +    P+ VT+N L+ GLC  GR+ E
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A +L  ++      P++VT+NTLI+G     +   AL++  EM+N+      P ++TYN+
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG---FNPTLLTYNA 467

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
           +I GLCK+G  D A+ ++ +M +  I P+  TY SLI G    D+
Sbjct: 468 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 271/540 (50%), Gaps = 41/540 (7%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F D M K    P +  + +L+  L + K+      +F  + +  L   +   N LI+  C
Sbjct: 198 FLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYC 257

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K+G    AF +  R+      PN +TFN L++GLC   ++ EA  L K++ V    P+  
Sbjct: 258 KVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGY 317

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T++ L +GL R  +   A++L+E+   +   I   +  T + +++GLCK G V+KA+E+L
Sbjct: 318 TYSILFDGLLRCDDGNGAMELYEQATEKGIRI---NNYTGSILLNGLCKQGKVEKAEEIL 374

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCK 306
            +  +  +  + + YN+ + G+C + D  +A  L IE M++ G++P+ +TFN++I+  C 
Sbjct: 375 KKFTENGLVADEVIYNTFVNGYCRIGDMNKA-ILTIERMESFGLRPNSITFNSLIDKFCD 433

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
             +MDK    ++ M ++GV P   TYN+L+DG+  +    R  ++   M   G + +V S
Sbjct: 434 MKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVS 493

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y  LIN  CKD K+ +A  + R+M+   + P+   YN L+ G   VG + DAL+  D+M 
Sbjct: 494 YGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM 553

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEA--------------------------------- 453
            +++ P   T+   IDGLCK G + EA                                 
Sbjct: 554 RSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVS 613

Query: 454 --VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
             + +++ ++N   +  + TY+ LI+G  K G ++   KL++ +     +PD V  + MI
Sbjct: 614 KCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMI 672

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           H   + G   KA  L   M  +   P ++T+ +L+ G  +  K S +  L++ M A++L 
Sbjct: 673 HCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELA 732



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 250/480 (52%), Gaps = 22/480 (4%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + +F  LL+ L K ++     SL K +  NG  PD +  ++L + L +    +GA  
Sbjct: 278 APNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAME 337

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  +        N  T + L+NGLC +G++ +A  + KK        + V +NT +NG C
Sbjct: 338 LYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYC 397

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  +   A+   E M   FG   +P+ +T+NS+ID  C    +DKA+E + +M ++ + P
Sbjct: 398 RIGDMNKAILTIERM-ESFG--LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTP 454

Query: 258 NVITYNSLICGF---CCVDDWKEAKCLFI--EMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           +V TYN+LI G+   C  D     +C  I  +M + GV+P+VV++ ++IN  CKDGK+ +
Sbjct: 455 SVETYNTLIDGYGKLCTFD-----RCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILE 509

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              +L  MI RGV P+   YN L+DG C+VG++  A   F  M+       + +YN+LI+
Sbjct: 510 AEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLID 569

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             CK  K+ +A     ++ S    P VITYN+L+SG    GN+   L L + M+   + P
Sbjct: 570 GLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKP 629

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI----ETYNCLINGLCKMGRLKTA 488
              T+   I G  K G     +++ + + N   ++ +      YN +I+   ++G  + A
Sbjct: 630 TVRTYHPLISGCSKEG-----IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKA 684

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             L   +  +G  PD +T +++I    +EG++    DL+ +M+AK   P   T+  L++G
Sbjct: 685 YSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKG 744



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 264/503 (52%), Gaps = 5/503 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV  ++ M +    P + S ++L + L   KQ+  VV LF  + ++G   D F+    I
Sbjct: 124 EAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAI 183

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
               K+         L  + +    PN   +N LI GLC E RI +A ++F ++      
Sbjct: 184 QAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLV 243

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            ++VT+NTLI+G C+      A K+ E M  +  A   P+++T+NS++ GLCK   + +A
Sbjct: 244 GSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA---PNIITFNSLLSGLCKMRKMKEA 300

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           + LL +M+     P+  TY+ L  G    DD   A  L+ +  + G++ +  T + ++N 
Sbjct: 301 RSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNG 360

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK GK++K   +L+   + G+  D V YN+ ++G+C +G +++A      M S G R +
Sbjct: 361 LCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPN 420

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             ++N LI+  C  ++++ A    ++M  + + PSV TYNTL+ G  ++       ++++
Sbjct: 421 SITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILE 480

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL-RIETYNCLINGLCKM 482
           +M+   V P+  ++ + I+ LCK+G +LEA  V + +  C+  L   + YN LI+G C +
Sbjct: 481 QMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMI-CRGVLPNAQVYNMLIDGSCMV 539

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G++K A + F  +      P +VT + +I  LCK+G++ +A D L  + +    P  +T+
Sbjct: 540 GKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITY 599

Query: 543 CTLLRGFVQNNKKSKVVVLLHKM 565
            +L+ G+      SK + L   M
Sbjct: 600 NSLISGYANAGNVSKCLGLYETM 622



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 180/354 (50%), Gaps = 4/354 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + ++  L+    K   +D    + +++   G+ P++     LINCLCK G    A +
Sbjct: 453 TPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEI 512

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VL  ++     PN   +N LI+G C  G++ +A R F ++      P +VT+N LI+GLC
Sbjct: 513 VLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLC 572

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + +  L   + F   +   G    PDV+TYNS+I G    G V K   L   MK+  I P
Sbjct: 573 K-KGKLTEAEDFLTQITSSGH--SPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKP 629

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
            V TY+ LI G C  +  +  + L+ EM+   + PD V +NAMI+   + G   K   L 
Sbjct: 630 TVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLH 688

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M+ +G++PD +TYNSL+ G    G++S  ++L  +M +K       +Y+IL+  +C  
Sbjct: 689 QGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDL 748

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +    A   YREM+     P+    N L +GL Q G L +   +  +M +  ++
Sbjct: 749 KDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGII 802



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 206/415 (49%), Gaps = 7/415 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           F+N   + G++  N+A+   + M      P   +F  L+      K+ D      K++  
Sbjct: 392 FVNGYCRIGDM--NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAE 449

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ P +   N LI+   K+      F +L ++      PN V++  LIN LC +G+I+E
Sbjct: 450 KGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILE 509

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  + + +      PN   +N LI+G C       AL+ F+EM+    +   P +VTYN 
Sbjct: 510 AEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMR---SEISPTLVTYNV 566

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +IDGLCK G + +A++ L Q+     +P+VITYNSLI G+    +  +   L+  M + G
Sbjct: 567 LIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLG 626

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++P V T++ +I+   K+G ++ V +L   M+Q  + PD V YN+++  +  +G   +A 
Sbjct: 627 IKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAY 685

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            L   M+ +G   D  +YN LI  + ++ K+ +   L   M ++ + P   TY+ L+ G 
Sbjct: 686 SLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGH 745

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
             + +   A     +M  N+ +P++        GL + G  L+ VQV  +  N K
Sbjct: 746 CDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEG-RLQEVQVICSEMNVK 799


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 231/436 (52%), Gaps = 6/436 (1%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           IL+   AKN +       FKR +  GL   +   N L++ L K+G       V   ++R 
Sbjct: 98  ILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRR 157

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
              P  ++FN +INGLC  G++ +A  + + + V     NV+T+NTLI+G C+       
Sbjct: 158 RIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKM 217

Query: 206 LK---LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            K   + +EM  +   IC P+ VT+N +IDG CKD  V  A ++  +M  + + PNV+TY
Sbjct: 218 YKADAILKEMRAD--GIC-PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTY 274

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           NSLI G C      EA  L  +M+++ ++P+++T NA++N  CK+  + +   L + M +
Sbjct: 275 NSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPK 334

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +G+ P+  TYN L+D +C    +  A  L+  M+ KG   DV +YN LI   C+   +E 
Sbjct: 335 QGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEA 394

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L  EM ++ ++  +ITYN L+  L   G +  AL+L+D+M    + P   T+ T ID
Sbjct: 395 ARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMID 454

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G CK G +  A+ +   +        + TYN LI G CK  +L+ A  L + +  KG IP
Sbjct: 455 GYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIP 514

Query: 503 DVVTCSTMIHWLCKEG 518
           + +T   +   + ++G
Sbjct: 515 NRMTYEIVTEEMMEKG 530



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 207/398 (52%), Gaps = 8/398 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I   E VY    MI+ +  P + SF I++  L K  + +    + + +   G+  +
Sbjct: 140 KVGEIGDMEFVY--KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSAN 197

Query: 116 LFVLNLLINCLCKMGITSGAF---VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
           +   N LI+  CKMG     +    +L  +      PN VTFN LI+G C +  +  A +
Sbjct: 198 VITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMK 257

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           +F ++N     PNVVT+N+LINGLC       A  L ++MVN   +  KP+++T+N++++
Sbjct: 258 VFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVN---SCLKPNIITHNALLN 314

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G CK+  V +A EL   M  + I PNV TYN LI  +C  ++ ++A  L+  M+  GV P
Sbjct: 315 GFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCP 374

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           DV T+N +I   C+ G ++    L+  M  + +  D +TYN L+D  C  G + +A  L 
Sbjct: 375 DVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLL 434

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M  KG +    +YN +I+  CK+  +  A+ L  +M       +V TYN L+ G  + 
Sbjct: 435 DEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKK 494

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
             L DA  L+++M    ++P+  T+    + + + GFV
Sbjct: 495 DKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 233/444 (52%), Gaps = 6/444 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F  N++  + L+       R       FK+ + +    +V + N L++GL +        
Sbjct: 89  FCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDME 148

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            +++EM+       +P ++++N +I+GLCK G ++KA +++  MK R ++ NVITYN+LI
Sbjct: 149 FVYKEMIRRR---IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLI 205

Query: 267 CGFCC---VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            G+C    +    +A  +  EM  +G+ P+ VTFN +I+  CKD  +    ++   M ++
Sbjct: 206 DGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQ 265

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           GV P+ VTYNSL++G C  G+++ A  L   MV+   + ++ ++N L+N  CK++ V+ A
Sbjct: 266 GVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQA 325

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+ +M  + I P+V TYN L+    +  N+ DA  L   M    V PD  T+   I G
Sbjct: 326 GELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAG 385

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC+ G +  A  +   +     +  + TYN LI+ LC  G +K A +L   +  KG  P 
Sbjct: 386 LCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPS 445

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            +T +TMI   CKEG +  A +L   ME    + +  T+  L++GF + +K      LL+
Sbjct: 446 QLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLN 505

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSK 587
           +M  + L+ + ++      +++ K
Sbjct: 506 EMLEKGLIPNRMTYEIVTEEMMEK 529



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 196/355 (55%), Gaps = 4/355 (1%)

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E   +  D  +  +V + N L+ G   V +  + + ++ EM+   ++P +++FN +IN  
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR---ARELFVSMVSKGCR 361
           CK GK++K   ++E M  RGV+ + +TYN+L+DG+C +G+I +   A  +   M + G  
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  ++NILI+  CKD+ V  A+ ++ EM  + ++P+V+TYN+L++GL   G + +A  L
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            D+M  + + P+  T    ++G CKN  V +A ++F  +        + TYN LI+  CK
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              ++ A  L+  +  KG  PDV T + +I  LC++G ++ A +L+ +M+ K+     +T
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           +  L+       +  K + LL +M  + L  S L+ ++ ++D   K+   R  LN
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNT-MIDGYCKEGNLRAALN 467


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 156/499 (31%), Positives = 238/499 (47%), Gaps = 11/499 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +   +A   FD M +    P + ++  ++   +K  + +  + + + +  NG  PD
Sbjct: 300 KSGRV--GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +  N LI  LC    T  A  +L   ++  FTP  VTF  LING C   +  +A R+  
Sbjct: 358 DWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 416

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA-ICKPDVVTYNSIIDGL 234
           K+    C  ++  F  LIN L +       LK  +E++NE  A    P+V+TY SIIDG 
Sbjct: 417 KMMSSKCKLDLQVFGKLINSLIKKDR----LKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK G VD A E+L  M+     PN  TYNSL+ G        +A  L  +M  +G+ P+V
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +T+  ++   C +   D   RL E+M Q G+ PD   Y  L D  C  GR   A E +  
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSF 589

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           +V KG       Y  LI+   K    + A  L   M+ E   P   TY+ LL  L +   
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +AL ++D+M L  +    F +   ID + + G    A +++  + +   +    TY  
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 709

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
            IN  CK GRL+ A  L  +++ +G  PDVVT + +I      G +D+A   L  M   +
Sbjct: 710 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGAS 769

Query: 535 CVPSEVTFCTLLRGFVQNN 553
           C P+  T+C LL+  ++ N
Sbjct: 770 CEPNYWTYCLLLKHLLKGN 788



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 228/451 (50%), Gaps = 7/451 (1%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           +   +LI  LC+      A V+   + R   +PN   F FLI+GLC  GR+ +A  LF  
Sbjct: 254 YSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDA 313

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P+V+T+N +I G  +      ALK+ +E++ + G  C PD  TYN++I GLC 
Sbjct: 314 MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG--CHPDDWTYNTLIYGLC- 369

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           D   ++A+ELL         P V+T+ +LI G+C  + + +A  +  +MM +  + D+  
Sbjct: 370 DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           F  +IN   K  ++ +   LL  +   G+ P+ +TY S++DG+C  G++  A E+   M 
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             GC+ + ++YN L+    KD+K+  A+ L  +M  + I P+VITY TLL G     +  
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +L + M+ N + PD   +A   D LCK G    A + +  I      L    Y  LI
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLI 606

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G  K G    A  L  R+  +G  PD  T S ++H LCK+ ++++A  +L  M  +   
Sbjct: 607 DGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIK 666

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            +   +  L+   ++  K      + ++M +
Sbjct: 667 CTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 247/519 (47%), Gaps = 40/519 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A + F  M  M       S+TIL+  L + K     + LF  +  +G  P++     LI
Sbjct: 236 KACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLI 295

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G    A ++   + ++   P+ +T+N +I G    GR+ +A ++ + +    C 
Sbjct: 296 SGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCH 355

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---------------------------- 215
           P+  T+NTLI GLC  + T  A +L    V E                            
Sbjct: 356 PDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM 414

Query: 216 ----FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
                 + CK D+  +  +I+ L K   + +AKELL ++    + PNVITY S+I G+C 
Sbjct: 415 KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCK 474

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
                 A  +   M  +G QP+  T+N+++    KD K+ K   LL  M + G+ P+ +T
Sbjct: 475 SGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 534

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y +L+ G C       A  LF  M   G + D ++Y +L +A CK  + E+A   Y  ++
Sbjct: 535 YTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIV 591

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
            + +  + + Y TL+ G  + GN   A  LI++M      PDS+T++  +  LCK   + 
Sbjct: 592 RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLN 651

Query: 452 EAVQVFQ--AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           EA+ +    ++R  KC   I  Y  LI+ + + G+   A ++++ +   G  P   T + 
Sbjct: 652 EALPILDQMSLRGIKCT--IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 709

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            I+  CKEG+++ A DL+L ME +   P  VT+  L+ G
Sbjct: 710 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 207/452 (45%), Gaps = 39/452 (8%)

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
           M +++ A   + R   +    +   +NF +  L          R++ +L      P+ VT
Sbjct: 126 MRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVT 185

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +NT+I   C+  +   A + F  ++   G + +P+  T N+++ G C+ G + KA  L L
Sbjct: 186 YNTMIKSYCKEGDLTTAHRCFRLLLE--GGL-EPETFTCNALVLGYCRTGELRKACWLFL 242

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M       N  +Y  LI G C     +EA  LF+ M  +G  P+V  F  +I+  CK G
Sbjct: 243 MMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSG 302

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++     L + M Q GV P  +TYN+++ G+  +GR++ A ++   M   GC  D ++YN
Sbjct: 303 RVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYN 362

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM--- 425
            LI   C DQK E+A  L    + E   P+V+T+  L++G        DAL++ +KM   
Sbjct: 363 TLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSS 421

Query: 426 --------------------------------QLNDVVPDSFTFATYIDGLCKNGFVLEA 453
                                             N +VP+  T+ + IDG CK+G V  A
Sbjct: 422 KCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIA 481

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           ++V + +    C+    TYN L+ GL K  +L  A  L  ++Q  G IP+V+T +T++  
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG 541

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
            C E   D A  L   ME     P E  +  L
Sbjct: 542 QCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 573



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 211/481 (43%), Gaps = 22/481 (4%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   ++  L+  L K+K+    ++L  ++  +G+ P++     L+   C       AF 
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 553

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   + ++   P+   +  L + LC  GR  EA     +  V       V + TLI+G  
Sbjct: 554 LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTK---VYYTTLIDGFS 610

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  NT  A  L E M++E    C PD  TY+ ++  LCK   +++A  +L QM  R I  
Sbjct: 611 KAGNTDFAATLIERMIDEG---CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
            +  Y  LI           AK ++ EM  +G +P   T+   IN  CK+G+++    L+
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + GV PD VTYN L+DG   +G I RA      MV   C  + ++Y +L+    K 
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 787

Query: 378 Q----------------KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
                            +++    L   M+   + P+V TY++L++G  + G L +A  L
Sbjct: 788 NLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 847

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +D M    + P+   +   I   C   F  +A+     +  C  + ++E+Y  L+ GLC 
Sbjct: 848 LDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 907

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G  +    LF  L   G   D V    +   L K G +D    +L  ME + C  S  T
Sbjct: 908 EGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQT 967

Query: 542 F 542
           +
Sbjct: 968 Y 968



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 187/379 (49%), Gaps = 34/379 (8%)

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN  +  L +    +    +  Q+    + P+ +TYN++I  +C   D   A   F  ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           + G++P+  T NA++   C+ G++ K   L  +M   G   +  +Y  L+ G C    + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  LF+ M   GC  +V ++  LI+  CK  +V DA  L+  M    + PSV+TYN ++
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC---------------KNGFVL 451
            G  ++G + DALK+ + M+ N   PD +T+ T I GLC               K GF  
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTP 390

Query: 452 -------------------EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
                              +A+++   + + KC+L ++ +  LIN L K  RLK A +L 
Sbjct: 391 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 450

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           + +   G +P+V+T +++I   CK G++D A ++L  ME   C P+  T+ +L+ G V++
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 510

Query: 553 NKKSKVVVLLHKMAAEKLV 571
            K  K + LL KM  + ++
Sbjct: 511 KKLHKAMALLTKMQKDGII 529



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 191/450 (42%), Gaps = 53/450 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF-- 136
           P + ++T LL        +D    LF+ +  NGL PD     +L + LCK G    A+  
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 137 ------------------------------VVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
                                          ++ R++    TP++ T++ L++ LC + R
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           + EA  +  ++++      +  +  LI+ + R      A +++ EM +      KP   T
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH---KPSATT 706

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y   I+  CK+G ++ A++L+L+M+   + P+V+TYN LI G   +     A      M+
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766

Query: 287 DNGVQPDVVTFNAMINYNCKDG----------------KMDKVNRLLELMIQRGVNPDTV 330
               +P+  T+  ++ +  K                  ++D   +LLE M++ G+NP   
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TY+SL+ GFC  GR+  A  L   M  KG   +   Y +LI   C  +  E A+     M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLI-DKMQLNDVVPDSFTFATYIDGLCKNGF 449
                +P + +Y  L+ GL   G+      L  D ++L     D   +    DGL K G+
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG-YNHDEVAWKILNDGLLKAGY 945

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           V    Q+   +    C +  +TY  + N +
Sbjct: 946 VDICFQMLSIMEKRYCCISSQTYALVTNKM 975



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 147/331 (44%), Gaps = 21/331 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN  ++ A    + MI    +P   ++++LL  L K K+ +  + +  +++  G+   
Sbjct: 611 KAGN--TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F   +LI+ + + G    A  +   +  S   P+  T+   IN  C EGR+ +A  L  
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+      P+VVT+N LI+G         A    + MV   GA C+P+  TY  ++  L 
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV---GASCEPNYWTYCLLLKHLL 785

Query: 236 KDGF----------------VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           K                   +D   +LL +M    +NP V TY+SLI GFC     +EA 
Sbjct: 786 KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 845

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L   M   G+ P+   +  +I   C     +K    + +M + G  P   +Y  L+ G 
Sbjct: 846 LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGL 905

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           C  G   + + LF  ++  G  HD  ++ IL
Sbjct: 906 CNEGDFEKVKSLFCDLLELGYNHDEVAWKIL 936



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 21/327 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+   D M        + ++TIL+  + +  ++D    ++  + S+G  P      + 
Sbjct: 651 NEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVF 710

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G    A  ++ ++ R    P+ VT+N LI+G    G I  A    K++   +C
Sbjct: 711 INSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASC 770

Query: 183 DPNVVTFNTLINGL-------CRTRNTL---------VALKLFEEMVNEFGAICKPDVVT 226
           +PN  T+  L+  L        R+ +T          +  +L E MV        P V T
Sbjct: 771 EPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHG---LNPTVTT 827

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+S+I G CK G +++A  LL  M  + ++PN   Y  LI   CC   + E    F+ +M
Sbjct: 828 YSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI-KCCCDTKFFEKALSFVSIM 886

Query: 287 DN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
              G QP + ++  ++   C +G  +KV  L   +++ G N D V +  L DG    G +
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 946

Query: 346 SRARELFVSMVSKGCRHDVYSYNILIN 372
               ++   M  + C     +Y ++ N
Sbjct: 947 DICFQMLSIMEKRYCCISSQTYALVTN 973



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 49/114 (42%)

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A+Q  +   + +  L  + YN  +  L +    +   +++ +L   G +PD VT +TMI
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
              CKEG +  A+     +      P   T   L+ G+ +  +  K   L   M
Sbjct: 191 KSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 260/488 (53%), Gaps = 4/488 (0%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D  + + +R+ ++G+ P++     LI   CK      AF +   ++RS   P+ VT + L
Sbjct: 239 DAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSAL 298

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           ++GLC +G+  EA  LF++++     PN VT+ TLI+ L + R    +L L  EMV+  G
Sbjct: 299 VDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSR-G 357

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
            +   D+V Y +++D L K+G +++AK++L   +  NI PN +TY  L+   C   +   
Sbjct: 358 VVM--DLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDG 415

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A+ + ++M +  V P+VVTF+++IN   K G + K    +  M   G+ P+ VTY +L+D
Sbjct: 416 AEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLID 475

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           GF        A +++  M+ +G   + +  + L+N   K+  +E A  L+++M    +  
Sbjct: 476 GFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLL 535

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
             + Y TL+ GLF+ GN+  A K+  ++   ++ PD+  +  +I+ LC  G   EA    
Sbjct: 536 DHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFL 595

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +RN   E    TYN +I   C+ G+   A KL   ++     P+++T +T++  L + 
Sbjct: 596 KEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEA 655

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G + KA  LL +M +    P+ +T   +L+     +++  V++ +H++     + +D+++
Sbjct: 656 GVVKKAKFLLNEMASAGFAPTSLTHQRVLQA-CSGSRRPDVILEIHELMMGAGLHADITV 714

Query: 578 SSKVVDLL 585
            + +V +L
Sbjct: 715 YNTLVHVL 722



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/579 (25%), Positives = 265/579 (45%), Gaps = 73/579 (12%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   ++ M++    P + + + L+  L ++ Q+    +LF+ ++  G+ P+      L
Sbjct: 274 DEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTL 333

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K    S +  +LG ++      + V +  L++ L  EG+I EA  + +       
Sbjct: 334 IDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNI 393

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VT+  L++  CR  N   A ++  +M  E   I  P+VVT++SII+GL K G + K
Sbjct: 394 TPNFVTYTVLVDAHCRAGNIDGAEQVLLQM-EEKSVI--PNVVTFSSIINGLVKRGCLGK 450

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A + + +MKD  I PNV+TY +LI GF      + A  ++ +M+  GV+ +    ++++N
Sbjct: 451 AADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVN 510

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG------------------------ 338
              K+G ++    L + M +RG+  D V Y +LMDG                        
Sbjct: 511 GLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSP 570

Query: 339 -----------FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
                       C +G+ S A+     M + G   D  +YN +I A C++ K   A+ L 
Sbjct: 571 DAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLL 630

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT----------- 436
           +EM    I+P++ITY TL+ GL + G +  A  L+++M      P S T           
Sbjct: 631 KEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGS 690

Query: 437 ------------------------FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
                                   + T +  LC +G    A  V   +          T+
Sbjct: 691 RRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITF 750

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI G CK   L  A  ++ ++ H+G  P++ T +T++  L   G++ +A+ +L DM+ 
Sbjct: 751 NALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKK 810

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
               P+ +T+  L+ G+ + + K + + L  +M ++  +
Sbjct: 811 VGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFI 849



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 226/443 (51%), Gaps = 9/443 (2%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D    N+ +  L + G    A  VL  + +   + + VT +  + GLC  G + EAA L 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 175 KKL----NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
           + L     +   D  VV +N LI+G C+ ++   AL + E M  +  A+   DVV YNS+
Sbjct: 174 EMLVRGRGIDGLD--VVGWNALIDGYCKVQDMAAALAVVERMTTQGVAL---DVVGYNSL 228

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           + G    G  D A E++ +MK   + PNV+TY +LI  +C      EA  L+  M+ +GV
Sbjct: 229 VAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGV 288

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PDVVT +A+++  C+DG+  +   L   M + GV P+ VTY +L+D      R S +  
Sbjct: 289 LPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLG 348

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           L   MVS+G   D+  Y  L++   K+ K+E+A  + R   S+ I P+ +TY  L+    
Sbjct: 349 LLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHC 408

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + GN+  A +++ +M+   V+P+  TF++ I+GL K G + +A    + +++      + 
Sbjct: 409 RAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVV 468

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  LI+G  K    + A  ++  + H+G   +     ++++ L K G ++ A  L  DM
Sbjct: 469 TYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDM 528

Query: 531 EAKNCVPSEVTFCTLLRGFVQNN 553
           + +  +   V + TL+ G  +  
Sbjct: 529 DERGLLLDHVNYTTLMDGLFKTG 551



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 248/549 (45%), Gaps = 67/549 (12%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +T L+  L K  + +    + +   S+ + P+     +L++  C+ G   GA  VL ++ 
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQME 424

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                PN VTF+ +INGL   G + +AA   +K+      PNVVT+ TLI+G  + +   
Sbjct: 425 EKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQE 484

Query: 204 VALKLFEEMVNE------------------------FGAICKP--------DVVTYNSII 231
            AL ++ +M++E                          A+ K         D V Y +++
Sbjct: 485 AALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLM 544

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           DGL K G +  A ++  ++ ++N++P+ + YN  I   C +  + EAK    EM + G++
Sbjct: 545 DGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLE 604

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR-- 349
           PD  T+N MI   C++GK  K  +LL+ M +  + P+ +TY +L+ G    G + +A+  
Sbjct: 605 PDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFL 664

Query: 350 ---------------------------------ELFVSMVSKGCRHDVYSYNILINANCK 376
                                            E+   M+  G   D+  YN L++  C 
Sbjct: 665 LNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCC 724

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
                +A  +  EML+  I P  IT+N L+ G  +  +L +A  +  +M    + P+  T
Sbjct: 725 HGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIAT 784

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           F T + GL   G + EA  V   ++    E    TY+ L+ G  K      A +L+  + 
Sbjct: 785 FNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 844

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG IP   T ++++    K G M++A +L  +M+ +  + +  T+  LL G+ +     
Sbjct: 845 SKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGI 904

Query: 557 KVVVLLHKM 565
           +V +LL  M
Sbjct: 905 EVRILLKDM 913



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 260/536 (48%), Gaps = 7/536 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGM--TSFTILLTMLAKNKQYDTV 100
           DG +++  L    ++G +   EA    + +++ +   G+    +  L+    K +     
Sbjct: 149 DGVTVSTALVGLCRTGLV--GEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAA 206

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           +++ +R+ + G+  D+   N L+      G    A  V+ R+      PN VT+  LI  
Sbjct: 207 LAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGE 266

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
            C    + EA  L++ +      P+VVT + L++GLCR      A  LF EM ++ G   
Sbjct: 267 YCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREM-DKIG--V 323

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            P+ VTY ++ID L K     ++  LL +M  R +  +++ Y +L+         +EAK 
Sbjct: 324 APNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKD 383

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +      + + P+ VT+  +++ +C+ G +D   ++L  M ++ V P+ VT++S+++G  
Sbjct: 384 VLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLV 443

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G + +A +    M   G   +V +Y  LI+   K Q  E A+ +YR+ML E +  +  
Sbjct: 444 KRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNF 503

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
             ++L++GL + GN+  A  L   M    ++ D   + T +DGL K G +  A +V Q +
Sbjct: 504 VVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQEL 563

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                      YN  IN LC +G+   A      +++ G  PD  T +TMI   C+EG+ 
Sbjct: 564 MEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKT 623

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            KA  LL +M+  +  P+ +T+ TL+ G ++     K   LL++MA+     + L+
Sbjct: 624 SKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLT 679



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/499 (26%), Positives = 240/499 (48%), Gaps = 6/499 (1%)

Query: 70  DCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           D M KMK S   P + ++  L+    K +  +  + +++ +   G+  + FV++ L+N L
Sbjct: 453 DYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGL 512

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
            K G   GA  +   +       + V +  L++GL   G +  A ++ ++L      P+ 
Sbjct: 513 RKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDA 572

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           V +N  IN LC       A    +EM N      +PD  TYN++I   C++G   KA +L
Sbjct: 573 VVYNVFINCLCTLGKFSEAKSFLKEMRNTG---LEPDQATYNTMIAARCREGKTSKALKL 629

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L +MK  +I PN+ITY +L+ G       K+AK L  EM   G  P  +T   ++     
Sbjct: 630 LKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSG 689

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
             + D +  + ELM+  G++ D   YN+L+   C  G    A  +   M+++G   D  +
Sbjct: 690 SRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTIT 749

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           +N LI  +CK   +++A  +Y +ML + + P++ T+NTLL GL   G +G+A  ++  M+
Sbjct: 750 FNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMK 809

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              + P++ T+   + G  K    +EA++++  + +     +  TYN L++   K G + 
Sbjct: 810 KVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMN 869

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +LF  ++ +G +    T   +++   K     +   LL DM+     PS+ T  ++ 
Sbjct: 870 QAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMS 929

Query: 547 RGFVQNNKKSKVVVLLHKM 565
           R F +     +   LL  +
Sbjct: 930 RAFSRPGMTGEARRLLKTL 948



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 215/449 (47%), Gaps = 20/449 (4%)

Query: 146 CFTP---NTVTFNFLINGLCAEGRIMEAARLFKKLNVFA----CDPNVVTFNTLINGLCR 198
           CF P   +T+T N +I   C+   +  A  L +  +          + V++N  +  L  
Sbjct: 68  CFRPVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSE 127

Query: 199 TRNTLVALKLFEEMVNEFGAICKP----DVVTYNSIIDGLCKDGFVDKAKELL-LQMKDR 253
             +  +A  +  EM       CK     D VT ++ + GLC+ G V +A  L  + ++ R
Sbjct: 128 QGHGRLAPPVLSEM-------CKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGR 180

Query: 254 NINP-NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
            I+  +V+ +N+LI G+C V D   A  +   M   GV  DVV +N+++      G  D 
Sbjct: 181 GIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADA 240

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              ++E M   GV P+ VTY +L+  +C    +  A  L+  MV  G   DV + + L++
Sbjct: 241 ALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVD 300

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             C+D +  +A  L+REM    + P+ +TY TL+  L +     ++L L+ +M    VV 
Sbjct: 301 GLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVM 360

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D   +   +D L K G + EA  V +  ++        TY  L++  C+ G +  A ++ 
Sbjct: 361 DLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVL 420

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            +++ K  IP+VVT S++I+ L K G + KA D +  M+     P+ VT+ TL+ GF + 
Sbjct: 421 LQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKF 480

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
             +   + +   M  E +  ++  + S V
Sbjct: 481 QGQEAALDVYRDMLHEGVEANNFVVDSLV 509



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 193/446 (43%), Gaps = 34/446 (7%)

Query: 47  IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR 106
           +   +N   K+GNI   EA   F  M +        ++T L+  L K         + + 
Sbjct: 505 VDSLVNGLRKNGNIEGAEA--LFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQE 562

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           L    L PD  V N+ INCLC +G  S A   L  +  +   P+  T+N +I   C EG+
Sbjct: 563 LMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGK 622

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE----------- 215
             +A +L K++   +  PN++T+ TL+ GL        A  L  EM +            
Sbjct: 623 TSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQR 682

Query: 216 ---------------------FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
                                 GA    D+  YN+++  LC  G    A  +L +M  R 
Sbjct: 683 VLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRG 742

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           I P+ IT+N+LI G C       A  ++ +M+  G+ P++ TFN ++      G++ + +
Sbjct: 743 IAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEAD 802

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            +L  M + G+ P+ +TY+ L+ G+        A  L+  MVSKG      +YN L++  
Sbjct: 803 TVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDF 862

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K   +  A  L+ EM    +  +  TY+ LL+G  ++ N  +   L+  M+     P  
Sbjct: 863 AKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSK 922

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAI 460
            T ++      + G   EA ++ + +
Sbjct: 923 GTISSMSRAFSRPGMTGEARRLLKTL 948



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 3/214 (1%)

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
           + G+ PD    N LI   CK      AF +  ++L    +PN  TFN L+ GL + GRI 
Sbjct: 740 TRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIG 799

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           EA  +   +     +PN +T++ L+ G  +  N + AL+L+ EMV++ G I  P   TYN
Sbjct: 800 EADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK-GFI--PKASTYN 856

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           S++    K G +++AKEL  +MK R +     TY+ L+ G+  + +  E + L  +M + 
Sbjct: 857 SLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKEL 916

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           G +P   T ++M     + G   +  RLL+ + +
Sbjct: 917 GFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 7/245 (2%)

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSER----IRPSVITYNTLLSGLFQVGNLGDA 418
           D  + N +I + C  + +  A+ L R     +    +    ++YN  L+ L + G+   A
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC--ELRIETYNCLI 476
             ++ +M    V  D  T +T + GLC+ G V EA  + + +   +    L +  +N LI
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALI 194

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G CK+  +  A  +  R+  +G   DVV  ++++      G  D A +++  M+A    
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVE 254

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           P+ VT+  L+  + +     +   L   M     V+ D+   S +VD L +D ++ E   
Sbjct: 255 PNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSG-VLPDVVTLSALVDGLCRDGQFSEAYA 313

Query: 597 QFRHL 601
            FR +
Sbjct: 314 LFREM 318


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 234/489 (47%), Gaps = 41/489 (8%)

Query: 37  SSHHFKDGT-SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           S  H+  GT S    L    KSG        Y  + M+     P   ++  LL  L + +
Sbjct: 9   SQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTY--NDMLGAGCVPNTYTYGYLLRSLCQAQ 66

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           +++   S+F+ + + G  P++F  ++LI  LC+      A  +L  ++     PN VT+ 
Sbjct: 67  RFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            L++GLC  G++ EA  LF ++    C P+ V +N LI+G  +  +   A +LFEEM+ +
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
               C P V TYNS++ G  + G   + + L   M  +   PN+ T+N+L+ GFC + D 
Sbjct: 187 G---CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            EA  LF+EM   G  PDVV++N ++   C  GK  +  RLL  MI+ GV PD V+YN L
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +DG+   G +  A +LF  +   G   D +SY+ +I+  C+  KV  A  ++++M++   
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA--- 360

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
                                           N   PD+      + GLC+   + E+ +
Sbjct: 361 --------------------------------NGSAPDAAVVIPLVIGLCRGERLTESCE 388

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +FQA+   +C   I  YN L+  LCK  R    C++FH L  +G  PDV     ++  L 
Sbjct: 389 LFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLR 448

Query: 516 KEGQMDKAN 524
           +    + A 
Sbjct: 449 RSDDKEAAE 457



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 229/449 (51%), Gaps = 6/449 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           +   T+++N+L+  L   GR       +  +    C PN  T+  L+  LC+ +    A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            +F  M  +    C P+V +Y+ +I GLC+   VD+A ELL +M D    PNV+TY SL+
Sbjct: 73  SVFRGMAAQG---CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C +   KEA  LF  M+  G  PD V +N +I+   K G M +  RL E M+++G  
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P   TYNSL+ GF   G   R + LF  M+ +GC  +++++N L++  CK   + +A  L
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + EM S    P V++YNTL+ G+   G   +A +L+ +M  + V PD  ++   IDG  K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           +G +  A+++F  I     E    +Y+ +I+ LC+ G++  A  +F  +   G  PD   
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              ++  LC+  ++ ++ +L   M    CVP    +  L+    +  +   V  + H++ 
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHEL- 428

Query: 567 AEKLVVSDLSLSSKVVDLL--SKDKKYRE 593
            E+    D+ +S  +++ L  S DK+  E
Sbjct: 429 TERGFSPDVEISKVILETLRRSDDKEAAE 457


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 255/512 (49%), Gaps = 4/512 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLA-KNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           NEA  FFD ++    +    S  + LT L+ K      V+ +F      G+  +    N+
Sbjct: 56  NEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNI 115

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N L ++G    A  +L R+      P+ V++  +I+G C  G + +  +L K++ +  
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG 175

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN+ T++++I  LC++   +   K+  EM+   G    PD V Y ++IDG CK G   
Sbjct: 176 LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKR-GVF--PDHVIYTTLIDGFCKLGNTQ 232

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A +L  +M+ R I P+ I +++LICG        EA  LF EM+  G +PD VT+ A+I
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALI 292

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK G+M K   L   M+Q G+ P+ VTY +L DG C  G +  A EL   M  KG +
Sbjct: 293 DGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQ 352

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            ++ +YN ++N  CK   +  AV L  EM    + P  ITY TL+   ++ G +  A +L
Sbjct: 353 LNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAREL 412

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           + +M    + P   TF   ++GLC +G + +  ++ + +          TYN ++   C 
Sbjct: 413 LREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCI 472

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              ++ + +++  +  +G +PD  T + +I   CK   M +A  L  +M  K    +  +
Sbjct: 473 RNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASS 532

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           +  L++GF +  K  +   L  +M  E LV S
Sbjct: 533 YNALIKGFFKRKKLLEARQLFEEMRREGLVAS 564



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 275/543 (50%), Gaps = 7/543 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTS--FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
           SN   +F + +I      G     F +   +L +    +     F +L + G+       
Sbjct: 18  SNSFTHFVERLIYTYKDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSC 77

Query: 120 NLLINCLC-KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           NL + CL  K  +      V     +     NT ++N L+N L   G+I EA  L  ++ 
Sbjct: 78  NLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRME 137

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C P+VV++ T+I+G C        ++L +EM  +   + KP++ TY+SII  LCK G
Sbjct: 138 FKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEM--QLKGL-KPNLYTYSSIILLLCKSG 194

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V + +++L +M  R + P+ + Y +LI GFC + + + A  LF EM    + PD + F+
Sbjct: 195 KVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFS 254

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+I      GK+ + ++L   MI++G  PD VTY +L+DG+C +G + +A  L   MV  
Sbjct: 255 ALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQI 314

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   +V +Y  L +  CK  +++ A  L  EM  + ++ ++ TYNT+++GL + GN+  A
Sbjct: 315 GLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQA 374

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           +KL+++M+   + PD+ T+ T +D   K G +++A ++ + + +   +  + T+N L+NG
Sbjct: 375 VKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNG 434

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LC  G+L+   +L   +  KG +P+  T ++++   C    M  + ++   M A+  VP 
Sbjct: 435 LCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPD 494

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             T+  L++G  +  +  K    LHK   EK      S  + ++    K KK  E    F
Sbjct: 495 SNTYNILIKGHCK-ARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLF 553

Query: 599 RHL 601
             +
Sbjct: 554 EEM 556



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 229/448 (51%), Gaps = 3/448 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+T ++       +   VV L K +   GL P+L+  + +I  LCK G       V
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +++    P+ V +  LI+G C  G    A +LF ++      P+ + F+ LI GL  
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           +   + A KLF EM+ +     +PD VTY ++IDG CK G + KA  L  QM    + PN
Sbjct: 263 SGKVVEADKLFNEMIKKG---FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPN 319

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+TY +L  G C   +   A  L  EM   G+Q ++ T+N ++N  CK G + +  +L+E
Sbjct: 320 VVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLME 379

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M + G++PDT+TY +LMD +   G + +AREL   M+ +G +  V ++N+L+N  C   
Sbjct: 380 EMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSG 439

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K+ED   L + ML + I P+  TYN+++       N+  + ++   M    VVPDS T+ 
Sbjct: 440 KLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYN 499

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I G CK   + EA  + + +   +  L   +YN LI G  K  +L  A +LF  ++ +
Sbjct: 500 ILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRRE 559

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           G +      +  +    +EG M+   +L
Sbjct: 560 GLVASAEIYNLFVDMNYEEGNMETTLEL 587



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 209/387 (54%), Gaps = 5/387 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +   E V     M+K    P    +T L+    K         LF  + +  + PD
Sbjct: 192 KSGKVVEGEKV--LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPD 249

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               + LI  L   G    A  +   +++  F P+ VT+  LI+G C  G + +A  L  
Sbjct: 250 SIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHN 309

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PNVVT+  L +GLC++     A +L  EM  +     + ++ TYN+I++GLC
Sbjct: 310 QMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG---LQLNISTYNTIVNGLC 366

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G + +A +L+ +MK+  ++P+ ITY +L+  +    +  +A+ L  EM+D G+QP VV
Sbjct: 367 KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVV 426

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           TFN ++N  C  GK++   RLL+ M+++G+ P+  TYNS+M  +C+   +  + E++  M
Sbjct: 427 TFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGM 486

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            ++G   D  +YNILI  +CK + +++A  L++EM+ +R   +  +YN L+ G F+   L
Sbjct: 487 CAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKL 546

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYID 442
            +A +L ++M+   +V  +  +  ++D
Sbjct: 547 LEARQLFEEMRREGLVASAEIYNLFVD 573



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 186/384 (48%), Gaps = 5/384 (1%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F D       ++   K GN  +  A   F  M   +  P   +F+ L+  L+ + +    
Sbjct: 212 FPDHVIYTTLIDGFCKLGN--TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEA 269

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
             LF  +   G  PD      LI+  CK+G    AF +  ++++   TPN VT+  L +G
Sbjct: 270 DKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADG 329

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
           LC  G +  A  L  ++       N+ T+NT++NGLC+  N L A+KL EEM     A  
Sbjct: 330 LCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKE---AGL 386

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PD +TY +++D   K G + KA+ELL +M DR + P V+T+N L+ G C     ++ + 
Sbjct: 387 HPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGER 446

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L   M++ G+ P+  T+N+++   C    M     +   M  +GV PD+ TYN L+ G C
Sbjct: 447 LLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHC 506

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
               +  A  L   MV K       SYN LI    K +K+ +A  L+ EM  E +  S  
Sbjct: 507 KARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAE 566

Query: 401 TYNTLLSGLFQVGNLGDALKLIDK 424
            YN  +   ++ GN+   L+L D+
Sbjct: 567 IYNLFVDMNYEEGNMETTLELCDE 590



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 170/337 (50%), Gaps = 3/337 (0%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           SG+    EA   F+ MIK    P   ++T L+    K  +      L  ++   GL P++
Sbjct: 261 SGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNV 320

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
                L + LCK G    A  +L  + R     N  T+N ++NGLC  G I++A +L ++
Sbjct: 321 VTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEE 380

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P+ +T+ TL++   +T   + A +L  EM++      +P VVT+N +++GLC 
Sbjct: 381 MKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG---LQPTVVTFNVLMNGLCM 437

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G ++  + LL  M ++ I PN  TYNS++  +C  ++ + +  ++  M   GV PD  T
Sbjct: 438 SGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNT 497

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I  +CK   M +   L + M+++  N    +YN+L+ GF    ++  AR+LF  M 
Sbjct: 498 YNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMR 557

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            +G       YN+ ++ N ++  +E  + L  E + +
Sbjct: 558 REGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 242/471 (51%), Gaps = 11/471 (2%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +LLT     + + T +SL+ RL S  L      L+ L++ L      + AFV+   I R 
Sbjct: 55  LLLTASVAGRPHTTSLSLYSRLKSLSLPIPTASLHPLLSSLPP----APAFVLFADIFRL 110

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
               +T TFN ++  LC  G+ + A  L +++      PN VT+NT+I G C        
Sbjct: 111 RLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAG 166

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNS 264
           +++  EM  E G I  PD  TY ++I G CK G V+ A ++  +M  +  + PN + YN+
Sbjct: 167 IEIMREM-RERGGIA-PDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNA 224

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI G+C   + + A     EM+D GV   V T+N  ++    +G+  + + L+E M ++G
Sbjct: 225 LIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKG 284

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PD  TYN L++G+C  G+  +A ++F  MV KG R  V +Y  LI+A      V++  
Sbjct: 285 LAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETD 344

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ + +   IRP +  YN L++     G++  A +++ +M+   + PD  T+ T + GL
Sbjct: 345 RLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGL 404

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G + EA  + + +     +  + +YN LI+G    G +K A K+   +  KG  P +
Sbjct: 405 CLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTL 464

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +T + MI  LC  GQ   A DL+ +M      P + T+ +L+ G    +++
Sbjct: 465 LTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDER 515



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 189/376 (50%), Gaps = 5/376 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMG 130
           +++  PSP   ++  ++       +    + + + +    G+ PD +    +I+  CK+G
Sbjct: 138 LLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVG 197

Query: 131 ITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
               A  V   +L      PN V +N LI G C +G +  A R   ++        V T+
Sbjct: 198 KVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATY 257

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N  ++ L        A  L EEM  E G    PD  TYN +I+G CK+G   KA ++   
Sbjct: 258 NLFVHTLFMEGRAAEAHALVEEM-GEKG--LAPDAFTYNILINGYCKEGKEKKAMKMFEV 314

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  + I   V+TY SLI         +E   LF + +  G++PD+  +NA+IN +C  G 
Sbjct: 315 MVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGD 374

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           MD+   ++  M ++ + PD VTYN+LM G CL+GR+  AR L   M  +G + D+ SYN 
Sbjct: 375 MDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNT 434

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+       ++DAV +  EM+ +   P+++TYN ++ GL   G  GDA  L+ +M  N 
Sbjct: 435 LISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNG 494

Query: 430 VVPDSFTFATYIDGLC 445
           + PD  T+ + I+GL 
Sbjct: 495 ITPDDSTYISLIEGLT 510



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 205/408 (50%), Gaps = 9/408 (2%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +  TFN ++  LC     + AL+L  +M +       P+ VTYN++I G C  G V    
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMPS-------PNAVTYNTVIAGFCARGRVQAGI 167

Query: 245 ELLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMIN 302
           E++ +M++R  I P+  TY ++I G+C V   ++A  +F EM+  G V+P+ V +NA+I 
Sbjct: 168 EIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIG 227

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C  G ++   R    M+ RGV+    TYN  +    + GR + A  L   M  KG   
Sbjct: 228 GYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAP 287

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D ++YNILIN  CK+ K + A+ ++  M+ + IR +V+TY +L+  L   G + +  +L 
Sbjct: 288 DAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLF 347

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           +      + PD F +   I+  C  G +  A ++   +   +      TYN L+ GLC +
Sbjct: 348 NDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLL 407

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GRL  A  L   +  +G  PD+V+ +T+I     +G +  A  +  +M  K   P+ +T+
Sbjct: 408 GRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTY 467

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
             +++G   N +      L+ +M    +   D +  S +  L ++D++
Sbjct: 468 NAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDER 515



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 112/211 (53%), Gaps = 3/211 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  F+ M+       + ++T L+  L+          LF      G+ PDLF+ N LI
Sbjct: 307 KAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALI 366

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  C  G    AF ++G + +   TP+ VT+N L+ GLC  GR+ EA  L +++      
Sbjct: 367 NSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQ 426

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++V++NTLI+G     +   A+K+ +EM+   G    P ++TYN++I GLC +G    A
Sbjct: 427 PDLVSYNTLISGYSMKGDIKDAVKVRDEMM---GKGFNPTLLTYNAMIKGLCLNGQGGDA 483

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDD 274
           ++L+ +M    I P+  TY SLI G    D+
Sbjct: 484 EDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 59/134 (44%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K + +P   ++  L+  L    + D    L + +   G+ PDL   N LI+     G 
Sbjct: 385 MEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGD 444

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  V   ++   F P  +T+N +I GLC  G+  +A  L K++      P+  T+ +
Sbjct: 445 IKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYIS 504

Query: 192 LINGLCRTRNTLVA 205
           LI GL      L A
Sbjct: 505 LIEGLTTEDERLAA 518


>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 393

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 205/358 (57%), Gaps = 14/358 (3%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC----------- 267
           + KPDVV YN+IID LCKD  V    +L  +M D+ I P+V+TYN+LI            
Sbjct: 34  LVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIR 93

Query: 268 ---GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
              GF  +   KEA  L  +M    V P++ TF  +++  CKDG++ K   +L +MI++ 
Sbjct: 94  KEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQR 153

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           V P+ VTYNSLMDG+ LV  +++A++LF ++  +G   +V SY ++IN  CK++ V++A 
Sbjct: 154 VEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAA 213

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L++EM S+ + P  + YN+L+ GL +   + D    I +M       +  T+ + +DGL
Sbjct: 214 NLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGL 273

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           CKN  V +A+ +   I+N      I TY  L++GLCK GRL+ A +++  L +KG   D 
Sbjct: 274 CKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDA 333

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
              + MI+ LCKEG +D+A  LL  ME   C P  VT+   +R   ++++   + + +
Sbjct: 334 RIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDRNEILYIFI 391



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 188/372 (50%), Gaps = 27/372 (7%)

Query: 64  EAVYFFDCMI----------KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
           +A+YF D +I          ++   P +  +  ++ +L K+K       L+  +    ++
Sbjct: 12  KALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIY 71

Query: 114 PDLFVLNLLINCLCK--------------MGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
           PD+   N LI  L                +G    A  +L ++     TPN  TF  L++
Sbjct: 72  PDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVD 131

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
           GLC +G + +A  +   +     +PN+VT+N+L++G    +    A +LF   ++  G  
Sbjct: 132 GLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNT-ISLRGM- 189

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             P+V +Y  +I+GLCK+  VD+A  L  +M  +N+ P+ + YNSLI G C      +  
Sbjct: 190 -TPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVW 248

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
               EM D G   +++T+N++++  CK+ ++DK   LL  +  +G+ P+  TY  L+DG 
Sbjct: 249 DFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGL 308

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  GR+  A+E++  +++KG + D   Y ++IN  CK+  +++A+ L  +M   +  P  
Sbjct: 309 CKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDG 368

Query: 400 ITYNTLLSGLFQ 411
           +TY   +  LF+
Sbjct: 369 VTYEITIRALFE 380



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 182/383 (47%), Gaps = 28/383 (7%)

Query: 233 GLCKDGFVDKA---------KELLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKC-L 281
           GLC +G V KA         K   L   +R  + P+V+ YN++I    C D      C L
Sbjct: 3   GLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTII-DILCKDKLVSDGCDL 61

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKD---------------GKMDKVNRLLELMIQRGVN 326
           + EM+D  + PDVVT+N +I Y+  +               G+M +   LL  M  + V 
Sbjct: 62  YSEMIDKKIYPDVVTYNTLI-YSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P+  T+ +L+DG C  G + +AR +   M+ +    ++ +YN L++     ++V  A  L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           +  +    + P+V +Y  +++GL +   + +A  L  +M   ++VPD+  + + IDGLCK
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           +  + +       + +      I TYN L++GLCK  ++  A  L  +++++G  P++ T
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYT 300

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            + ++  LCK G++  A ++  D+  K        +  ++ G  +     + + LL KM 
Sbjct: 301 YTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKME 360

Query: 567 AEKLVVSDLSLSSKVVDLLSKDK 589
             K     ++    +  L   D+
Sbjct: 361 DNKCTPDGVTYEITIRALFESDR 383



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 127/243 (52%), Gaps = 24/243 (9%)

Query: 336 MDGFCLVGRISRARELFVSMVSKG----------CRHDVYSYNILINANCKDQKVEDAVC 385
           M G CL G + +A      +++KG           + DV  YN +I+  CKD+ V D   
Sbjct: 1   MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQ--------------VGNLGDALKLIDKMQLNDVV 431
           LY EM+ ++I P V+TYNTL+  L                +G + +A+ L+++M    V 
Sbjct: 61  LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  TF T +DGLCK+G V +A  V   +   + E  I TYN L++G   +  +  A +L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F+ +  +G  P+V +   MI+ LCK   +D+A +L  +M +KN VP  V + +L+ G  +
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 552 NNK 554
           + +
Sbjct: 241 SRR 243



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 3/204 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   F+ +     +P + S+ +++  L KNK  D   +LFK ++S  + PD    N L
Sbjct: 175 NKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSL 234

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK       +  +G +       N +T+N L++GLC   ++ +A  L  K+     
Sbjct: 235 IDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGI 294

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+ T+  L++GLC+      A +++++++N+   +   D   Y  +I+GLCK+GF+D+
Sbjct: 295 RPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQL---DARIYTVMINGLCKEGFLDE 351

Query: 243 AKELLLQMKDRNINPNVITYNSLI 266
           A  LL +M+D    P+ +TY   I
Sbjct: 352 ALSLLSKMEDNKCTPDGVTYEITI 375



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 1/130 (0%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++  LL  L KN Q D  ++L  ++ + G+ P+++   +L++ LCK G    A  V  
Sbjct: 263 IITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQ 322

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT- 199
            +L   +  +   +  +INGLC EG + EA  L  K+    C P+ VT+   I  L  + 
Sbjct: 323 DLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESD 382

Query: 200 RNTLVALKLF 209
           RN ++ + +F
Sbjct: 383 RNEILYIFIF 392



 Score = 42.4 bits (98), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 43/88 (48%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++TIL+  L KN +      +++ L + G   D  +  ++IN LCK G    A  +
Sbjct: 296 PNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSL 355

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGR 166
           L ++  +  TP+ VT+   I  L    R
Sbjct: 356 LSKMEDNKCTPDGVTYEITIRALFESDR 383


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 146/461 (31%), Positives = 238/461 (51%), Gaps = 7/461 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV     + +++  P   +   +L  LA+N+Q   V  LF+ L +    P++F  N++
Sbjct: 150 DDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIV 205

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G    A  +  R+     +P+ VT+N LI+G    G + E   L  ++    C
Sbjct: 206 IDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGC 265

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +VVT+N LIN   +      A   F EM    G +   +VVT ++ +D  CK+G V +
Sbjct: 266 AADVVTYNALINCFSKFGWIEKAYSYFGEM-KRLGVMA--NVVTLSTFVDAFCKEGLVRE 322

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  QM+ R + PN  TY SL+ G C      +A  L  EM+  G+ P+VVT+  M++
Sbjct: 323 AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVD 382

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+   + +L LM + GV  + + Y +L+ G  +     RA +L   M +KG   
Sbjct: 383 GLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMEL 442

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV  Y  LI   CK QK+++A  L  +M    +RP+ + Y T++   F+ G   +A+ L+
Sbjct: 443 DVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALL 502

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            K+  + + P+  T+   IDGLCK G + EA+  F  +R    +  ++ Y  LI+G CK+
Sbjct: 503 HKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKI 562

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           G L  A  L + +  KG   D V  +++I    K+G +  A
Sbjct: 563 GSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGA 603



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 231/469 (49%), Gaps = 3/469 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F  M  M  SP + ++  L+    K  + + V  L   +  +G   D+   N LI
Sbjct: 217 EARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALI 276

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           NC  K G    A+   G + R     N VT +  ++  C EG + EA +LF ++ V    
Sbjct: 277 NCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMM 336

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T+ +L++G C+      A+ L +EMV++ G +  P+VVTY  ++DGLCK+G V  A
Sbjct: 337 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ-GLV--PNVVTYTVMVDGLCKEGKVAVA 393

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ++L  M+   +  N + Y +LI G     + + A  L  EM + G++ DV  +  +I  
Sbjct: 394 DDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWG 453

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK  K+D+   LL  M   G+ P+TV Y ++MD F   G+ S A  L   +   G + +
Sbjct: 454 LCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPN 513

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +Y  LI+  CK   + +A+  + +M    + P+V  Y TL+ G  ++G+L  A+ L++
Sbjct: 514 VVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMN 573

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M    +  D   + + IDG  K G +  A  +   +     +L +  Y C I+G C M 
Sbjct: 574 EMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMN 633

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
            ++ A  +   +   G  PD    + +I    K G M++A+ L  +ME+
Sbjct: 634 MMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 221/448 (49%), Gaps = 7/448 (1%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V + L++ L   G+   A   L R+ +    PNT T N ++  L    +     RLF+ L
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL 194

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 PNV TFN +I+ LC+    + A  LF  M    G  C PDVVTYNS+IDG  K 
Sbjct: 195 PA----PNVFTFNIVIDFLCKQGELVEARALFVRM-KAMG--CSPDVVTYNSLIDGYGKC 247

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G +++ + L+ +M+      +V+TYN+LI  F      ++A   F EM   GV  +VVT 
Sbjct: 248 GELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTL 307

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           +  ++  CK+G + +  +L   M  RG+ P+  TY SL+DG C  GR+  A  L   MV 
Sbjct: 308 STFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 367

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +G   +V +Y ++++  CK+ KV  A  +   M    ++ + + Y TL+ G F   N   
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER 427

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           AL L+++M+   +  D   + T I GLCK   + EA  +   + +C        Y  +++
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMD 487

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
              K G+   A  L H++   G  P+VVT   +I  LCK G + +A      M      P
Sbjct: 488 AFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDP 547

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +   + TL+ GF +    SK V L+++M
Sbjct: 548 NVQVYTTLIDGFCKIGSLSKAVHLMNEM 575



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 12/249 (4%)

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           V  ++R R+L V   ++ C H      IL+      Q       L R +      P+V T
Sbjct: 153 VRALARVRQLRVPPNTRTCNH------ILLRLARNRQG-----GLVRRLFEHLPAPNVFT 201

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +N ++  L + G L +A  L  +M+     PD  T+ + IDG  K G + E   +   +R
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
              C   + TYN LIN   K G ++ A   F  ++  G + +VVT ST +   CKEG + 
Sbjct: 262 KSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVR 321

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A  L   M  +  +P+E T+ +L+ G  +  +    +VLL +M  + LV + ++ +  +
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV-M 380

Query: 582 VDLLSKDKK 590
           VD L K+ K
Sbjct: 381 VDGLCKEGK 389



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 2/171 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G+I   EA+  FD M ++   P +  +T L+    K       V L   +   G+  D
Sbjct: 526 KAGSIY--EAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLD 583

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             V   LI+   K G   GAF +  +++ +    +   +   I+G C    + EA  +  
Sbjct: 584 KVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLS 643

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           ++      P+   +N LI    +  N   A  L  EM +   +  + D  +
Sbjct: 644 EMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMESVLSSCTEEDTAS 694


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 269/511 (52%), Gaps = 9/511 (1%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            + ++++    +  + +     F+   + G+  D    +++I  +CK   +  A  +L  
Sbjct: 225 ATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLRE 284

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP--NVVTFNTLINGLCRT 199
           +    + P+ V F  +I     +G+++EA ++  K  + +C    NVV   TL+ G C+ 
Sbjct: 285 MRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKV--KGEMLSCGKPMNVVVATTLMKGYCKQ 342

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
            +   AL+LF++M NE G IC P+ VTY  II+  CK+G +DKA E+  QMK+++I+P V
Sbjct: 343 GDLDSALELFDKM-NENG-IC-PNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTV 399

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
              NSLI G+      +EA  LF E +  G+  +V T+N+++++ CK+GKM +   + E 
Sbjct: 400 FNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEK 458

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M+++GV P  V+YN+++ G C  G +  A  +FV M+ KG + ++ +Y++L++   K   
Sbjct: 459 MVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGD 518

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            E A  LY  M  E I PS  T N +++GL + G   ++   + K+     +P   T+  
Sbjct: 519 TEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNC 578

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            IDG  K G V  A+ V+  +        + TY  LING CK   +  A K+   +++KG
Sbjct: 579 IIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG 638

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
              DV     +I   C++G M  A+ LL +++     P++V + +++ GF +  +  +  
Sbjct: 639 IELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGF-RKLQNMEAA 697

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           + LHK    + +  DL + + ++  L K+ K
Sbjct: 698 LHLHKRMINEGIPCDLQIYTTLISGLLKEGK 728



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 254/493 (51%), Gaps = 6/493 (1%)

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           T L+    K    D+ + LF ++N NG+ P+     ++I   CK G    A+ +  ++  
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD-PNVVTFNTLINGLCRTRNTL 203
              +P     N LI G        EA++LF +    AC   NV T+N+L++ LC+     
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLFDE--AVACGIANVFTYNSLLSWLCKEGKMS 450

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  ++E+MV +     +P VV+YN++I G C+ G +D A  + ++M ++ + PN+ITY+
Sbjct: 451 EACSIWEKMVRKG---VRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYS 507

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            L+ G+    D + A  L+  M    + P   T N +IN  CK G+  +    L+ ++Q 
Sbjct: 508 VLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQE 567

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G  P  +TYN ++DGF   G ++ A  ++  M   G   +V++Y  LIN  CK   ++ A
Sbjct: 568 GFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLA 627

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + +  EM ++ I   V  Y  L+ G  + G++ +A +L+ ++Q   + P+   +++ I G
Sbjct: 628 LKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISG 687

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             K   +  A+ + + + N      ++ Y  LI+GL K G+L  A +L+  +  KG +PD
Sbjct: 688 FRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPD 747

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           ++T S +IH LC +GQ++ A  +L DM+ K   P+   + TL+ G  +     +   L +
Sbjct: 748 LITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHN 807

Query: 564 KMAAEKLVVSDLS 576
           +M  + LV  D +
Sbjct: 808 EMLDKGLVPDDTT 820



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 236/466 (50%), Gaps = 8/466 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN+  ++A   ++ M     SP + +   L+    K +  +    LF    + G+  +
Sbjct: 376 KNGNM--DKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-AN 432

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F  N L++ LCK G  S A  +  +++R    P+ V++N +I G C +G +  A  +F 
Sbjct: 433 VFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFV 492

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PN++T++ L++G  +  +T  A  L++ M  E  A   P   T N II+GLC
Sbjct: 493 EMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIA---PSDFTCNIIINGLC 549

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G   ++++ L ++      P  +TYN +I GF        A  ++ EM   GV P+V 
Sbjct: 550 KAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVF 609

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +IN  CK   MD   ++++ M  +G+  D   Y +L+DGFC  G +  A +L   +
Sbjct: 610 TYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL 669

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              G   +   Y+ +I+   K Q +E A+ L++ M++E I   +  Y TL+SGL + G L
Sbjct: 670 QEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKL 729

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNC 474
             A +L  +M    ++PD  T++  I GLC  G +  A ++ + + R C     +  YN 
Sbjct: 730 LFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTP-TVFIYNT 788

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           LI G  K G L+ A +L + +  KG +PD  T   +++   K+G +
Sbjct: 789 LITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/550 (24%), Positives = 231/550 (42%), Gaps = 105/550 (19%)

Query: 137 VVLGRILRSC----FTPNTVTFNFLINGLCAEGRIMEAARLFKKL------------NVF 180
           VV+ R++ S     F  ++  FN+L+N      RI +A   F  L            N+F
Sbjct: 136 VVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIF 195

Query: 181 ACD---PNVV-----TFNTL----INGLCRTRNTLVALKLFEEMVNEFGAICKP------ 222
             +    N++      +N +    + G C T + ++   + E  + E     +       
Sbjct: 196 LSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGV 255

Query: 223 --DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP----------------------- 257
             D   Y+ +I+ +CK      A  LL +M+D+   P                       
Sbjct: 256 ELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVK 315

Query: 258 ------------NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
                       NV+   +L+ G+C   D   A  LF +M +NG+ P+ VT+  +I + C
Sbjct: 316 VKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCC 375

Query: 306 KDGKMDKVNRLLELMIQRGVNP----------------------------------DTVT 331
           K+G MDK   +   M  + ++P                                  +  T
Sbjct: 376 KNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFT 435

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YNSL+   C  G++S A  ++  MV KG R  V SYN +I  +C+   ++ A  ++ EML
Sbjct: 436 YNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEML 495

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
            + ++P++ITY+ L+ G F+ G+   A  L D+M+  ++ P  FT    I+GLCK G   
Sbjct: 496 EKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTS 555

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           E+    + +          TYNC+I+G  K G + +A  ++  +   G  P+V T + +I
Sbjct: 556 ESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLI 615

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           +  CK   MD A  ++ +M+ K        +C L+ GF +         LL ++    L 
Sbjct: 616 NGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLS 675

Query: 572 VSDLSLSSKV 581
            + +  SS +
Sbjct: 676 PNKVVYSSMI 685



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/410 (22%), Positives = 172/410 (41%), Gaps = 70/410 (17%)

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +N L+  +       +A   F  +++  + P +   N  ++   K+  + +   +   M 
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            +GV  D  T + ++      G++  A   F    +KG   D  +Y+I+I A CK     
Sbjct: 217 SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276

Query: 382 DAVCLYREMLSERIRP-----------------------------------SVITYNTLL 406
            A+ L REM  +   P                                   +V+   TL+
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLM 336

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN---- 462
            G  + G+L  AL+L DKM  N + P++ T+A  I+  CKNG + +A +++  ++N    
Sbjct: 337 KGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDIS 396

Query: 463 -----------------------------CKCEL-RIETYNCLINGLCKMGRLKTACKLF 492
                                          C +  + TYN L++ LCK G++  AC ++
Sbjct: 397 PTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIW 456

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            ++  KG  P VV+ + MI   C++G MD AN + ++M  K   P+ +T+  L+ G+ + 
Sbjct: 457 EKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKK 516

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                   L  +M  E +  SD + +  +++ L K  +  E  ++ + L+
Sbjct: 517 GDTEYAFGLYDRMRGENIAPSDFTCNI-IINGLCKAGRTSESQDRLKKLV 565



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 143/301 (47%), Gaps = 7/301 (2%)

Query: 273 DDWKEAKCLFIEMMDNG-----VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           DDW     + +  +         + D   FN ++N   K  +++        +I++ + P
Sbjct: 128 DDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVP 187

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
                N  +        I  AR+++  M SKG + D  + +++I A+ ++ K+E+A   +
Sbjct: 188 CLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWF 247

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC-K 446
           RE  ++ +      Y+ ++  + +  +   AL L+ +M+    VP    F T + G+C K
Sbjct: 248 REAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIF-TRVIGVCMK 306

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G +LEAV+V   + +C   + +     L+ G CK G L +A +LF ++   G  P+ VT
Sbjct: 307 QGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVT 366

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            + +I W CK G MDKA ++   M+ K+  P+     +L+RG+++     +   L  +  
Sbjct: 367 YAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAV 426

Query: 567 A 567
           A
Sbjct: 427 A 427


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/440 (33%), Positives = 229/440 (52%), Gaps = 11/440 (2%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F++L+     +  +   +  F+ +  + L         L + L K+ +TS A+     IL
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
              + P+   FN L++ LC E +I EA  LF ++      P VV+FNTLING C++ N  
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
              +L   M+        PDV TY+ +I+GLCK+G +D A +L L+M DR + PN +T+ 
Sbjct: 278 QGFRLKRFMMENR---VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFT 334

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI G C          ++ +M+  GV+PDV+T+N +IN  CK G + +  +L+  M QR
Sbjct: 335 TLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR 394

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD  TY  L+DG C  G +  A E+   MV +G   D  ++  LI+  C++ +V +A
Sbjct: 395 GLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEA 454

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
               REML   I+P   TY  ++ G  + G++    KL+ +MQ +  VP   T+   ++G
Sbjct: 455 ERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNG 514

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ-HKGPIP 502
           LCK G +  A  +  A+ N        TYN L+ G CK G  +     F +LQ  KG + 
Sbjct: 515 LCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRED----FDKLQSEKGLVQ 570

Query: 503 DVVTCSTMIHWL---CKEGQ 519
           D  + +++I  L   CKE Q
Sbjct: 571 DYGSYTSLIGDLRKTCKERQ 590



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 230/444 (51%), Gaps = 7/444 (1%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           + + F+ L+N     G   +A + F+ +          +   L + L +   T  A   +
Sbjct: 154 SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFY 213

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           EE+++       PDV  +N ++  LCK+  +++A+ L  ++  R + P V+++N+LI G+
Sbjct: 214 EEILD---CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGY 270

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C   +  +   L   MM+N V PDV T++ +IN  CK+G++D  N+L   M  RG+ P+ 
Sbjct: 271 CKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VT+ +L++G C+ GR     E++  M+ KG + DV +YN LIN  CK   + +A  L  E
Sbjct: 331 VTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIE 390

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    ++P   TY  L+ G  + G+L  AL++  +M    +  D+  F   I G C+ G 
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           V+EA +  + +     +    TY  +I+G CK G +KT  KL   +Q  G +P VVT + 
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +++ LCK+GQM  AN LL  M     VP ++T+  LL G  ++  +        K+ +EK
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRED----FDKLQSEK 566

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRE 593
            +V D    + ++  L K  K R+
Sbjct: 567 GLVQDYGSYTSLIGDLRKTCKERQ 590



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/398 (33%), Positives = 215/398 (54%), Gaps = 9/398 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           +L DR    N+TS  A  F++ ++     P +  F +L+  L K  + +    LF  +  
Sbjct: 195 YLFDRLMKLNLTS-PAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGK 253

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            GL P +   N LIN  CK G     F +   ++ +   P+  T++ LINGLC EG++ +
Sbjct: 254 RGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDD 313

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A +LF ++      PN VTF TLING C T    + ++++++M+ +     KPDV+TYN+
Sbjct: 314 ANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG---VKPDVITYNT 370

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+GLCK G + +AK+L+++M  R + P+  TY  LI G C   D + A  +  EM+  G
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++ D V F A+I+  C++G++ +  R L  M++ G+ PD  TY  ++ GFC  G +    
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGF 490

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   M   G    V +YN+L+N  CK  ++++A  L   ML+  + P  ITYN LL G 
Sbjct: 491 KLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGH 550

Query: 410 FQVGNLGDALKLIDKMQLND-VVPDSFTFATYIDGLCK 446
            + GN  D     DK+Q    +V D  ++ + I  L K
Sbjct: 551 CKHGNRED----FDKLQSEKGLVQDYGSYTSLIGDLRK 584



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 151/303 (49%), Gaps = 1/303 (0%)

Query: 278 AKCLFIEMMD-NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           A  +F  +++  G     + F+ ++N     G      +   L+ +  +     +   L 
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLF 197

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           D    +   S A   +  ++  G   DV  +N+L++  CK+ K+ +A  L+ E+    +R
Sbjct: 198 DRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLR 257

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P+V+++NTL++G  + GNL    +L   M  N V PD FT++  I+GLCK G + +A ++
Sbjct: 258 PTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F  + +        T+  LING C  GR     +++ ++  KG  PDV+T +T+I+ LCK
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            G + +A  L+++M  +   P + T+  L+ G  +       + +  +M  E + + +++
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437

Query: 577 LSS 579
            ++
Sbjct: 438 FTA 440



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 145/327 (44%), Gaps = 31/327 (9%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
           N+NP+ ++  SL+  F     W   +  F        +  + ++  M ++ C    + + 
Sbjct: 75  NLNPHSLSPPSLLSFF----KWLSTQHHF--------RLSIHSYCTMTHFLCTHKMLSEA 122

Query: 314 NRLLELMIQR-----------------GVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
             LL+ ++ R                 G +   + ++ LM+ +   G  S A + F  + 
Sbjct: 123 QSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVR 182

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
               +   +S   L +   K      A   Y E+L     P V  +N L+  L +   + 
Sbjct: 183 KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKIN 242

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A  L  ++    + P   +F T I+G CK+G + +  ++ + +   +    + TY+ LI
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLI 302

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           NGLCK G+L  A KLF  +  +G +P+ VT +T+I+  C  G+ D   ++   M  K   
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK 362

Query: 537 PSEVTFCTLLRGF--VQNNKKSKVVVL 561
           P  +T+ TL+ G   V + +++K +V+
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVI 389


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 240/486 (49%), Gaps = 3/486 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+    + ++       F  L S G    +   N LI  L ++G    A+ V   I 
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           RS    N  T N ++N LC +G++ +      ++      P++VT+NTLI+         
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A +L   M    G    P V TYN++I+GLCK G  ++AKE+  +M    ++P+  TY 
Sbjct: 288 EAFELMNAMP---GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           SL+   C   D  E + +F +M    V PD+V F++M++   + G +DK       + + 
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD V Y  L+ G+C  G IS A  L   M+ +GC  DV +YN +++  CK + + +A
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+ EM    + P   T   L+ G  ++GNL +A++L  KM+   +  D  T+ T +DG
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             K G +  A +++  + + +      +Y+ L+N LC  G L  A +++  +  K   P 
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           V+ C++MI   C+ G        L  M ++  VP  +++ TL+ GFV+    SK   L+ 
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644

Query: 564 KMAAEK 569
           KM  E+
Sbjct: 645 KMEEEQ 650



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 246/466 (52%), Gaps = 5/466 (1%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
            +++ ++ +G+  +++ LN+++N LCK G        L ++      P+ VT+N LI+  
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
            ++G + EA  L   +      P V T+NT+INGLC+      A ++F EM+    +   
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR---SGLS 337

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD  TY S++   CK G V + +++   M+ R++ P+++ ++S++  F    +  +A   
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           F  + + G+ PD V +  +I   C+ G +     L   M+Q+G   D VTYN+++ G C 
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
              +  A +LF  M  +    D Y+  ILI+ +CK   +++A+ L+++M  +RIR  V+T
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YNTLL G  +VG++  A ++   M   +++P   +++  ++ LC  G + EA +V+  + 
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +   +  +   N +I G C+ G          ++  +G +PD ++ +T+I+   +E  M 
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS 637

Query: 522 KANDLLLDMEAKN--CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           KA  L+  ME +    VP   T+ ++L GF + N+  +  V+L KM
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 273/555 (49%), Gaps = 24/555 (4%)

Query: 18  YRCNFWCSFGRPPNPKTDLSSHHFKDGT-SIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
           YRC    + G+    +      +FK  + S++  ++   +SG ++  ++     C+++M 
Sbjct: 86  YRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQS-----CLLRMI 140

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
              G++   I+          +++ S F    SN       V +LLI    +      A 
Sbjct: 141 RRSGVSRLEIV----------NSLDSTFSNCGSND-----SVFDLLIRTYVQARKLREAH 185

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
                +    FT +    N LI  L   G +  A  ++++++      NV T N ++N L
Sbjct: 186 EAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNAL 245

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+    +  +  F   V E G    PD+VTYN++I      G +++A EL+  M  +  +
Sbjct: 246 CKD-GKMEKVGTFLSQVQEKGVY--PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 302

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P V TYN++I G C    ++ AK +F EM+ +G+ PD  T+ +++   CK G + +  ++
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M  R V PD V ++S+M  F   G + +A   F S+   G   D   Y ILI   C+
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
              +  A+ L  EML +     V+TYNT+L GL +   LG+A KL ++M    + PDS+T
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
               IDG CK G +  A+++FQ ++  +  L + TYN L++G  K+G + TA +++  + 
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            K  +P  ++ S +++ LC +G + +A  +  +M +KN  P+ +   ++++G+ ++   S
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602

Query: 557 KVVVLLHKMAAEKLV 571
                L KM +E  V
Sbjct: 603 DGESFLEKMISEGFV 617



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 233/463 (50%), Gaps = 5/463 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L++  +     +    L   +   G  P ++  N +IN LCK G    A  V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +LRS  +P++ T+  L+   C +G ++E  ++F  +      P++V F+++++   R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           + N   AL  F   V E G I  PD V Y  +I G C+ G +  A  L  +M  +    +
Sbjct: 388 SGNLDKALMYFNS-VKEAGLI--PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+TYN+++ G C      EA  LF EM +  + PD  T   +I+ +CK G +     L +
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M ++ +  D VTYN+L+DGF  VG I  A+E++  MVSK       SY+IL+NA C   
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            + +A  ++ EM+S+ I+P+V+  N+++ G  + GN  D    ++KM     VPD  ++ 
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCEL--RIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           T I G  +   + +A  + + +   +  L   + TYN +++G C+  ++K A  +  ++ 
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
            +G  PD  T + MI+    +  + +A  +  +M  +   P +
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 198/393 (50%), Gaps = 7/393 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D T+    L +  K G++   E V  F  M      P +  F+ ++++  ++   D  + 
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKV--FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            F  +   GL PD  +  +LI   C+ G+ S A  +   +L+     + VT+N +++GLC
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
               + EA +LF ++   A  P+  T   LI+G C+  N   A++LF++M  +     + 
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR---IRL 513

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           DVVTYN+++DG  K G +D AKE+   M  + I P  I+Y+ L+   C      EA  ++
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM+   ++P V+  N+MI   C+ G        LE MI  G  PD ++YN+L+ GF   
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633

Query: 343 GRISRARELFVSMVSK--GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             +S+A  L   M  +  G   DV++YN +++  C+  ++++A  + R+M+   + P   
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
           TY  +++G     NL +A ++ D+M      PD
Sbjct: 694 TYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 191/390 (48%), Gaps = 5/390 (1%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  M++   SP  T++  LL    K         +F  + S  + PDL   + +++   +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A +    +  +   P+ V +  LI G C +G I  A  L  ++    C  +VVT
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +NT+++GLC+ +    A KLF EM         PD  T   +IDG CK G +  A EL  
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTER---ALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK++ I  +V+TYN+L+ GF  V D   AK ++ +M+   + P  ++++ ++N  C  G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            + +  R+ + MI + + P  +  NS++ G+C  G  S        M+S+G   D  SYN
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624

Query: 369 ILINANCKDQKVEDAVCLYREMLSER--IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
            LI    +++ +  A  L ++M  E+  + P V TYN++L G  +   + +A  ++ KM 
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
              V PD  T+   I+G      + EA ++
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 3/253 (1%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F D  ++   ++   K GN+ +  A+  F  M + +    + ++  LL    K    DT 
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQN--AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
             ++  + S  + P     ++L+N LC  G  + AF V   ++     P  +  N +I G
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
            C  G   +     +K+      P+ +++NTLI G  R  N   A  L ++M  E G + 
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PDV TYNSI+ G C+   + +A+ +L +M +R +NP+  TY  +I GF   D+  EA  
Sbjct: 655 -PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713

Query: 281 LFIEMMDNGVQPD 293
           +  EM+  G  PD
Sbjct: 714 IHDEMLQRGFSPD 726


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 147/436 (33%), Positives = 238/436 (54%), Gaps = 11/436 (2%)

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           N +  D+ VL  + N    + I  G F    R     F  + ++ N L++GL  E    +
Sbjct: 84  NSILADMLVLAFVRN----LKILRG-FEAFKRAGDYGFKLSLISCNPLLSGLVKESENGD 138

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
              +++++     + NV++FN ++NGLC+      A  + E+M   +G    P+V+TYN+
Sbjct: 139 MEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDM-KVWGV--SPNVITYNT 195

Query: 230 IIDGLCKDGFVDK---AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           +IDG CK G + K   A  +L +M  + I PN +TYN LI GFC  ++   A  +F EM 
Sbjct: 196 LIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQ 255

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G++P+VVT+N +IN  C DGK+D+   L + M+   + P+ VT+N L++GFC    ++
Sbjct: 256 RQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVN 315

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  LF  M  +G   +  +Y  LI+A CKD ++EDA  LY  M+   I P V TYN L+
Sbjct: 316 EAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           +GL + G++  A  L+++M    +  D  T+   ID LCK G   +AV++   +      
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLN 435

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
               TYN L++G C+ G L+ A  +  R++ KG   +VVT + +I   C +G+++ AN L
Sbjct: 436 PSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGL 495

Query: 527 LLDMEAKNCVPSEVTF 542
           L +M  +  VP+  T+
Sbjct: 496 LNEMLERGLVPNRTTY 511



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/423 (33%), Positives = 226/423 (53%), Gaps = 11/423 (2%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
           FKR    G    L   N L++ L K         V   +++     N ++FN ++NGLC 
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCK 167

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC---RTRNTLVALKLFEEMVNEFGAIC 220
            G++  A  + + + V+   PNV+T+NTLI+G C   R      A  + +EMV +   IC
Sbjct: 168 VGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAK--GIC 225

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            P+ VTYN +IDG CKD  V  A  +  +M+ + + PNV+TYN LI G C      EA  
Sbjct: 226 -PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVA 284

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L  +M+ + ++P+VVT N +IN  CK+  +++   L   M ++GV+P+ +TY +L+D +C
Sbjct: 285 LRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYC 344

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GR+  A  L+  M+ +G   +V +YN LI   C+   V+ A  L  EM+S+++   V+
Sbjct: 345 KDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVV 404

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYN L+  L + G    A+KL+D+M    + P   T+ T +DG C+ G +  A+ V   +
Sbjct: 405 TYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRM 464

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                +  + T+N LI G C  GRL+ A  L + +  +G +P+  T     + + KE  M
Sbjct: 465 ERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTT-----YEIIKEEMM 519

Query: 521 DKA 523
           +K 
Sbjct: 520 EKG 522



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/316 (38%), Positives = 178/316 (56%), Gaps = 3/316 (0%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           ++ K + + G+ P+    N+LI+  CK    SGA  V G + R    PN VT+N LINGL
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C++G++ EA  L  ++     +PNVVT N LING C+ +    A+ LF +M  +      
Sbjct: 274 CSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG---VD 330

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+ +TY ++ID  CKDG ++ A  L   M DR I P V TYN LI G C   D K A+ L
Sbjct: 331 PNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSL 390

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             EM+   +  DVVT+N +I+  CK G+  K  +LL+ M ++G+NP  VTYN+LMDG+C 
Sbjct: 391 MNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCR 450

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G +  A  +   M  KG + +V ++N+LI   C   ++EDA  L  EML   + P+  T
Sbjct: 451 EGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTT 510

Query: 402 YNTLLSGLFQVGNLGD 417
           Y  +   + + G + D
Sbjct: 511 YEIIKEEMMEKGFVPD 526



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 211/384 (54%), Gaps = 6/384 (1%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N +  + L+    R    L   + F+    ++G   K  +++ N ++ GL K+      +
Sbjct: 84  NSILADMLVLAFVRNLKILRGFEAFKR-AGDYG--FKLSLISCNPLLSGLVKESENGDME 140

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            +  +M  R I  NVI++N ++ G C V     A  +  +M   GV P+V+T+N +I+  
Sbjct: 141 FVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGY 200

Query: 305 CK---DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           CK    GKM K + +L+ M+ +G+ P+ VTYN L+DGFC    +S A  +F  M  +G R
Sbjct: 201 CKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +V +YNILIN  C D KV++AV L  +M+S  + P+V+T+N L++G  +   + +A+ L
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            + M+   V P++ T+ T ID  CK+G + +A  ++  + +      + TYNCLI GLC+
Sbjct: 321 FNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCR 380

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G +K A  L + +  K    DVVT + +I  LCK+G+  KA  LL +M  K   PS VT
Sbjct: 381 KGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVT 440

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
           + TL+ G+ +       +++  +M
Sbjct: 441 YNTLMDGYCREGNLRAALIVRTRM 464



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 224/428 (52%), Gaps = 6/428 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F  N++  + L+       +I+     FK+   +    ++++ N L++GL +        
Sbjct: 81  FCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDME 140

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            ++ EM+       + +V+++N +++GLCK G +++A +++  MK   ++PNVITYN+LI
Sbjct: 141 FVYREMIKR---KIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLI 197

Query: 267 CGFCC---VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            G+C    +    +A  +  EM+  G+ P+ VT+N +I+  CKD  +    R+   M ++
Sbjct: 198 DGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQ 257

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P+ VTYN L++G C  G++  A  L   MVS     +V ++N+LIN  CK++ V +A
Sbjct: 258 GLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEA 317

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + L+ +M  + + P+ +TY TL+    + G + DA  L + M    + P+  T+   I G
Sbjct: 318 INLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAG 377

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC+ G V  A  +   + + K    + TYN LI+ LCK G  + A KL   +  KG  P 
Sbjct: 378 LCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPS 437

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            VT +T++   C+EG +  A  +   ME K    + VT   L++GF    +      LL+
Sbjct: 438 HVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLN 497

Query: 564 KMAAEKLV 571
           +M    LV
Sbjct: 498 EMLERGLV 505



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 205/387 (52%), Gaps = 6/387 (1%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           + +  MIK K    + SF I++  L K  + +    + + +   G+ P++   N LI+  
Sbjct: 141 FVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGY 200

Query: 127 CKMGITSGAF---VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           CKMG     +    +L  ++     PN VT+N LI+G C +  +  A R+F ++      
Sbjct: 201 CKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNVVT+N LINGLC       A+ L ++MV+   +  +P+VVT+N +I+G CK+  V++A
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVS---SDLEPNVVTHNVLINGFCKNKTVNEA 317

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L   M+ + ++PN +TY +LI  +C     ++A  L+  M+D G+ P+V T+N +I  
Sbjct: 318 INLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAG 377

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G +     L+  M+ + ++ D VTYN L+D  C  G   +A +L   M  KG    
Sbjct: 378 LCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPS 437

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN L++  C++  +  A+ +   M  +  + +V+T+N L+ G    G L DA  L++
Sbjct: 438 HVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLN 497

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFV 450
           +M    +VP+  T+    + + + GFV
Sbjct: 498 EMLERGLVPNRTTYEIIKEEMMEKGFV 524



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 198/360 (55%), Gaps = 8/360 (2%)

Query: 228 NSIIDGLCKDGFVDKAK-----ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           NSI+  +    FV   K     E   +  D     ++I+ N L+ G     +  + + ++
Sbjct: 84  NSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVY 143

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM+   ++ +V++FN ++N  CK GK+++   ++E M   GV+P+ +TYN+L+DG+C +
Sbjct: 144 REMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKM 203

Query: 343 GRISR---ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           GRI +   A  +   MV+KG   +  +YNILI+  CKD+ V  A+ ++ EM  + +RP+V
Sbjct: 204 GRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNV 263

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TYN L++GL   G + +A+ L D+M  +D+ P+  T    I+G CKN  V EA+ +F  
Sbjct: 264 VTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFND 323

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +    TY  LI+  CK GR++ A  L++ +  +G  P+V T + +I  LC++G 
Sbjct: 324 MEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGD 383

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +  A  L+ +M +K      VT+  L+    +  +  K V LL +M  + L  S ++ ++
Sbjct: 384 VKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNT 443



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 150/286 (52%), Gaps = 9/286 (3%)

Query: 47  IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR 106
           I  F  D + SG      A+  F  M +    P + ++ IL+  L  + + D  V+L  +
Sbjct: 235 IDGFCKDENVSG------AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQ 288

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           + S+ L P++   N+LIN  CK    + A  +   + +    PN +T+  LI+  C +GR
Sbjct: 289 MVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGR 348

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           + +A  L+  +      P V T+N LI GLCR  +   A  L  EMV++       DVVT
Sbjct: 349 MEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK---KLSADVVT 405

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN +ID LCK G   KA +LL +M ++ +NP+ +TYN+L+ G+C   + + A  +   M 
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRME 465

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
             G Q +VVT N +I   C  G+++  N LL  M++RG+ P+  TY
Sbjct: 466 RKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTY 511



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 168/312 (53%), Gaps = 4/312 (1%)

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           D G +  +++ N +++   K+ +   +  +   MI+R +  + +++N +++G C VG+++
Sbjct: 113 DYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLN 172

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVED---AVCLYREMLSERIRPSVITYN 403
           RA ++   M   G   +V +YN LI+  CK  ++     A  + +EM+++ I P+ +TYN
Sbjct: 173 RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYN 232

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            L+ G  +  N+  A+++  +MQ   + P+  T+   I+GLC +G V EAV +   + + 
Sbjct: 233 ILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSS 292

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             E  + T+N LING CK   +  A  LF+ ++ +G  P+ +T +T+I   CK+G+M+ A
Sbjct: 293 DLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDA 352

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             L   M  +   P   T+  L+ G  +         L+++M ++KL  +D+   + ++D
Sbjct: 353 FALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKL-SADVVTYNILID 411

Query: 584 LLSKDKKYRECL 595
            L K  + R+ +
Sbjct: 412 SLCKKGESRKAV 423



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 19/236 (8%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N T NEA+  F+ M K    P   ++T L+    K+ + +   +L+  +   G+FP++  
Sbjct: 311 NKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVST 370

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            N LI  LC+ G    A  ++  ++    + + VT+N LI+ LC +G   +A +L  ++ 
Sbjct: 371 YNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMF 430

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +P+ VT+NTL++G CR  N   AL +   M  +     + +VVT+N +I G C  G
Sbjct: 431 EKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGK---QANVVTHNVLIKGFCLKG 487

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
            ++ A  LL +M +R + PN  TY  +          KE      EMM+ G  PD+
Sbjct: 488 RLEDANGLLNEMLERGLVPNRTTYEII----------KE------EMMEKGFVPDI 527


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 243/472 (51%), Gaps = 11/472 (2%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +LLT  A  + + T + L+ R+ S  L      L+ L++ L     ++ AF +   + R 
Sbjct: 422 LLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALP----SAPAFALFADMFRL 477

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
                T TFN ++  LC+ G+   A  L +++      PN VT+NT+I G C       A
Sbjct: 478 RLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAA 533

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVITYNS 264
           L +  EM  E G I  P+  TY ++I G CK G VD+A ++  +M  +  + P  + YN+
Sbjct: 534 LDIMREM-RERGGIA-PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 591

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI G+C       A      M++ GV   V T+N +++    DG+  +   L+E M  +G
Sbjct: 592 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 651

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PD  TYN L++G C  G + +A E+F +M  +G R  V +Y  LI A  K  +V++  
Sbjct: 652 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 711

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ E +   IRP ++ YN L++     GN+  A +++ +M+   + PD  T+ T + GL
Sbjct: 712 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 771

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G V EA ++   +     +  + TYN LI+G    G +K A ++ + + +KG  P +
Sbjct: 772 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 831

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
           +T + +I  LCK GQ D A +++ +M      P + T+ +L+ G    ++++
Sbjct: 832 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 883



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 246/501 (49%), Gaps = 18/501 (3%)

Query: 97  YDTVVSLFKRLNSNGLFPDL-----FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
           + +V+S  K L+   + P L      + NLL+     +   + +  +  R+       +T
Sbjct: 393 FKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIST 452

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            + + L++ L +       A +F+ L +  C     TFN ++  LC       AL+L  +
Sbjct: 453 ASLHPLLSALPSAPAFALFADMFR-LRLPLC---TTTFNIMLRHLCSAGKPARALELLRQ 508

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVITYNSLICGFC 270
           M        +P+ VTYN++I G C  G V  A +++ +M++R  I PN  TY ++I G+C
Sbjct: 509 M-------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 561

Query: 271 CVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
            V    EA  +F EM+  G V+P+ V +NA+I   C  GK+D      + M++RGV    
Sbjct: 562 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 621

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN L+    + GR + A EL   M  KG   DV++YNILIN +CK+  V+ A+ ++  
Sbjct: 622 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 681

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +R +V+TY  L+  L + G + +  KL D+     + PD   +   I+    +G 
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           +  A ++   +   +      TYN L+ GLC +GR+  A KL   +  +G  PD+VT +T
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I     +G +  A  +  +M  K   P+ +T+  L++G  +N +      ++ +M    
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861

Query: 570 LVVSDLSLSSKVVDLLSKDKK 590
           +   D +  S +  L ++D++
Sbjct: 862 ITPDDSTYISLIEGLTTEDER 882



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 193/375 (51%), Gaps = 5/375 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMG 130
           +++  P P   ++  ++       +    + + + +    G+ P+ +    +I+  CK+G
Sbjct: 505 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 564

Query: 131 ITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
               A  V   +L +    P  V +N LI G C +G++  A     ++        V T+
Sbjct: 565 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 624

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N L++ L        A +L EEM    G    PDV TYN +I+G CK+G V KA E+   
Sbjct: 625 NLLVHALFMDGRGTEAYELVEEM---GGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 681

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  R +   V+TY +LI         +E   LF E +  G++PD+V +NA+IN +   G 
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+   ++  M ++ + PD VTYN+LM G CL+GR+  AR+L   M  +G + D+ +YN 
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+       V+DA+ +  EM+++   P+++TYN L+ GL + G   DA  ++ +M  N 
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861

Query: 430 VVPDSFTFATYIDGL 444
           + PD  T+ + I+GL
Sbjct: 862 ITPDDSTYISLIEGL 876



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 152/277 (54%), Gaps = 3/277 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ + D M++   +  + ++ +L+  L  + +      L + +   GL PD+F  N+L
Sbjct: 603 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 662

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G    A  +   + R       VT+  LI  L  +G++ E  +LF +      
Sbjct: 663 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 722

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++V +N LIN    + N   A ++  EM  +  A   PD VTYN+++ GLC  G VD+
Sbjct: 723 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA---PDDVTYNTLMRGLCLLGRVDE 779

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++L+ +M +R I P+++TYN+LI G+    D K+A  +  EMM+ G  P ++T+NA+I 
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
             CK+G+ D    +++ M++ G+ PD  TY SL++G 
Sbjct: 840 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 162/322 (50%), Gaps = 5/322 (1%)

Query: 63  NEAVYFFDCMI-KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +EAV  FD M+ K +  P    +  L+       + DT +    R+   G+   +   NL
Sbjct: 567 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 626

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++ L   G  + A+ ++  +      P+  T+N LING C EG + +A  +F+ ++   
Sbjct: 627 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 686

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
               VVT+  LI  L +        KLF+E V       +PD+V YN++I+     G +D
Sbjct: 687 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG---IRPDLVLYNALINSHSTSGNID 743

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A E++ +M+ + I P+ +TYN+L+ G C +    EA+ L  EM + G+QPD+VT+N +I
Sbjct: 744 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 803

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +     G +    R+   M+ +G NP  +TYN+L+ G C  G+   A  +   MV  G  
Sbjct: 804 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 863

Query: 362 HDVYSYNILINA-NCKDQKVED 382
            D  +Y  LI     +D++  D
Sbjct: 864 PDDSTYISLIEGLTTEDERAID 885



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 119/225 (52%), Gaps = 5/225 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K GN+   +A+  F+ M +      + ++T L+  L+K  Q      LF     
Sbjct: 662 LINGHCKEGNV--KKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ PDL + N LIN     G    AF ++G + +    P+ VT+N L+ GLC  GR+ E
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A +L  ++      P++VT+NTLI+G     +   AL++  EM+N+      P ++TYN+
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG---FNPTLLTYNA 836

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
           +I GLCK+G  D A+ ++ +M +  I P+  TY SLI G    D+
Sbjct: 837 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 150/509 (29%), Positives = 260/509 (51%), Gaps = 14/509 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTI------LLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
            EA+   + M K    P M ++ I      LL +++  ++      + K L   GL PDL
Sbjct: 237 EEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI-----IQKMLTDEGLKPDL 291

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
               +LI   C+MG    A  +   +L S F  N + ++ L++ LC  G++ EA +L  +
Sbjct: 292 VTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYE 351

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P++VT++ LI+GLC+      A++L++EM   F  I  P+   ++ I+ GLC+
Sbjct: 352 MEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC--FNRIF-PNSFAHSGILKGLCE 408

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G +  A+     +   N+ P+V  YN +I G+  + D +EA  L+  + D  + P +VT
Sbjct: 409 KGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVT 468

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           FN++I   CK+ K+ +  RLLE +   G+ P  VTY +LM+ +C  G I++  EL + M 
Sbjct: 469 FNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMN 528

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            K     V +Y ++I   CK +K+E++V L  +M ++ + P  ITYNT++    +  ++ 
Sbjct: 529 LKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMR 588

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A +L+D M ++++ P   T+   IDGLC+ G V +A +V  ++++    L    Y  +I
Sbjct: 589 KAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMI 648

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
              C  G  + A K+FH++  KG    +   S +I+ LCK   +++A      M +    
Sbjct: 649 KAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVS 708

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           P +  F  +L  F +      V  LL  M
Sbjct: 709 PDQEIFEMMLNAFHRAGHVHSVFELLAVM 737



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 245/474 (51%), Gaps = 5/474 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF-PDLFVLNLLINCLCKMGITSGA 135
           P    TS  I+  +  +++  D V  LF R N    F P +   N +++  CK+G+   A
Sbjct: 147 PQSARTSSIIVDGLCGQSRFRDAV--LFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVA 204

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
                 +L+    P+T ++N LI+GL   G + EA  L   +      P++VT+  +  G
Sbjct: 205 KSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKG 264

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
                    A ++ ++M+ + G   KPD+VTY  +I G C+ G +++A  L   +     
Sbjct: 265 FHLLGLMSGAREIIQKMLTDEG--LKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGF 322

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
             NVI Y+ L+   C      EA  L  EM  N +QPD+VT++ +I+  CK GK+ +  +
Sbjct: 323 QLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQ 382

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L + M    + P++  ++ ++ G C  G +S AR  F S++    R DV  YNI+I+   
Sbjct: 383 LYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYV 442

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K   VE+AV LY+ +  + I PS++T+N+L+ G  +   + +A +L++ ++L+ + P + 
Sbjct: 443 KLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAV 502

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+ T ++  C+ G + +  ++   +     E  + TY  +I GLCK  +L+ + +L   +
Sbjct: 503 TYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDM 562

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           + KG  PD +T +T+I   CK   M KA +LL DM   N  P+  T+  L+ G 
Sbjct: 563 RAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGL 616



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 242/434 (55%), Gaps = 5/434 (1%)

Query: 148 TPNTV-TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           TP +  T + +++GLC + R  +A    ++ +     P+VV+FNT+++  C+     VA 
Sbjct: 146 TPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVA- 204

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           K F  M+ ++G +  PD  +YN +I GL   G +++A EL   M+ + + P+++TY  + 
Sbjct: 205 KSFFCMMLKYGIL--PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVA 262

Query: 267 CGFCCVDDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
            GF  +     A+ +  +M+ D G++PD+VT+  +I  +C+ G +++  RL   ++  G 
Sbjct: 263 KGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGF 322

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             + + Y+ L+   C  G++  A +L   M +   + D+ +Y+ILI+  CK  KV+ A+ 
Sbjct: 323 QLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQ 382

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           LY+EM   RI P+   ++ +L GL + G L DA    D + ++++ PD   +   IDG  
Sbjct: 383 LYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYV 442

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G V EAV++++ +R+      I T+N LI G CK  ++  A +L   ++  G  P  V
Sbjct: 443 KLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAV 502

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T +T+++  C+EG ++K ++LLL+M  K+  P+ VT+  +++G  +  K  + V LL  M
Sbjct: 503 TYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDM 562

Query: 566 AAEKLVVSDLSLSS 579
            A+ L    ++ ++
Sbjct: 563 RAKGLAPDQITYNT 576



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 253/500 (50%), Gaps = 4/500 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           ++KMK      S     ++L   +  D +  ++  +  +G        +++++ LC    
Sbjct: 106 LVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSR 165

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A + L +     F P+ V+FN +++  C  G    A   F  +  +   P+  ++N 
Sbjct: 166 FRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNI 225

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM- 250
           LI+GL    +   AL+L  +M  +     +PD+VTY  +  G    G +  A+E++ +M 
Sbjct: 226 LIHGLIVAGSMEEALELTNDMEKQG---LQPDMVTYKIVAKGFHLLGLMSGAREIIQKML 282

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
            D  + P+++TY  LICG C + + +EA  L  +++ +G Q +V+ ++ +++  CK G++
Sbjct: 283 TDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQV 342

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           D+  +LL  M    + PD VTY+ L+ G C  G++ +A +L+  M       + ++++ +
Sbjct: 343 DEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGI 402

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +   C+   + DA   +  ++   +RP V  YN ++ G  ++G++ +A++L  +++   +
Sbjct: 403 LKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAI 462

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            P   TF + I G CKN  V+EA ++ ++I+    E    TY  L+N  C+ G +    +
Sbjct: 463 TPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHE 522

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L   +  K   P VVT + +I  LCK+ +++++  LL DM AK   P ++T+ T+++ F 
Sbjct: 523 LLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFC 582

Query: 551 QNNKKSKVVVLLHKMAAEKL 570
           +     K   LL  M    L
Sbjct: 583 KAKDMRKAFELLDDMLIHNL 602



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 244/498 (48%), Gaps = 6/498 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + SF  +++   K    D   S F  +   G+ PD +  N+LI+ L   G    A  
Sbjct: 182 APSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALE 241

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR--LFKKLNVFACDPNVVTFNTLING 195
           +   + +    P+ VT+  +  G    G +M  AR  + K L      P++VT+  LI G
Sbjct: 242 LTNDMEKQGLQPDMVTYKIVAKGFHLLG-LMSGAREIIQKMLTDEGLKPDLVTYTVLICG 300

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            C+  N   AL+L  ++++   +  + +V+ Y+ ++  LCK G VD+A +LL +M+  N+
Sbjct: 301 HCQMGNIEEALRLRRDLLS---SGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNL 357

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P+++TY+ LI G C     ++A  L+ EM  N + P+    + ++   C+ G +     
Sbjct: 358 QPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARM 417

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
             + +I   + PD   YN ++DG+  +G +  A  L+  +  K     + ++N LI   C
Sbjct: 418 YFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFC 477

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K++KV +A  L   +    + PS +TY TL++   + GN+    +L+ +M L D+ P   
Sbjct: 478 KNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVV 537

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+   I GLCK   + E+VQ+ + +R         TYN +I   CK   ++ A +L   +
Sbjct: 538 TYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDM 597

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
                 P   T + +I  LC+ G ++ A+ +L+ ++ +N   ++V + T+++        
Sbjct: 598 LIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDA 657

Query: 556 SKVVVLLHKMAAEKLVVS 573
            + V + H+M  +   VS
Sbjct: 658 QRAVKVFHQMVEKGFEVS 675



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 196/405 (48%), Gaps = 40/405 (9%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +  +EA+     M      P + +++IL+  L K  +    + L+K +  N +FP+
Sbjct: 338 KRGQV--DEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395

Query: 116 LFVLNLLINCLCKMGITSGA-------------------------FVVLG---------- 140
            F  + ++  LC+ G+ S A                         +V LG          
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           R+     TP+ VTFN LI G C   +++EA RL + + +   +P+ VT+ TL+N  C   
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           N     KL E ++       +P VVTY  +I GLCK   ++++ +LL  M+ + + P+ I
Sbjct: 516 NI---NKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQI 572

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TYN++I  FC   D ++A  L  +M+ + ++P   T+N +I+  C+ G ++  +R+L  +
Sbjct: 573 TYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSL 632

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
             R +N   V Y +++   C+ G   RA ++F  MV KG    +  Y+ +IN  CK   +
Sbjct: 633 QDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLI 692

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            +A   +  MLS+ + P    +  +L+   + G++    +L+  M
Sbjct: 693 NEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 201/430 (46%), Gaps = 105/430 (24%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLIC-------------------------------- 267
           V  A  +L++MK++N+ P++ TYNSL+                                 
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVD 158

Query: 268 GFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCK-------------------- 306
           G C    +++A  LF+   D     P VV+FN +++  CK                    
Sbjct: 159 GLCGQSRFRDA-VLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGIL 217

Query: 307 ---------------DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
                           G M++   L   M ++G+ PD VTY  +  GF L+G +S ARE+
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 352 FVSMVS-KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
              M++ +G + D+ +Y +LI  +C+   +E+A+ L R++LS   + +VI Y+ LLS L 
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ------------ 458
           + G + +AL+L+ +M+ N++ PD  T++  I GLCK G V +A+Q+++            
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 459 ---AIRNCKCE------------------LR--IETYNCLINGLCKMGRLKTACKLFHRL 495
               I    CE                  LR  +  YN +I+G  K+G ++ A +L+ RL
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           + K   P +VT +++I+  CK  ++ +A  LL  ++     PS VT+ TL+  + +    
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNI 517

Query: 556 SKVVVLLHKM 565
           +K+  LL +M
Sbjct: 518 NKLHELLLEM 527



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 153/333 (45%), Gaps = 32/333 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A  +FD +I     P +T + I++    K    +  V L+KRL    + P +   N L
Sbjct: 413 SDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSL 472

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   CK      A  +L  I      P+ VT+  L+N  C EG I +   L  ++N+   
Sbjct: 473 IYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDI 532

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA------------ICK--------- 221
           +P VVT+  +I GLC+ R    +++L E+M  +  A             CK         
Sbjct: 533 EPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFE 592

Query: 222 -----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                      P   TYN +IDGLC+ G V+ A  +L+ ++DRNIN   + Y ++I   C
Sbjct: 593 LLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHC 652

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
              D + A  +F +M++ G +  +  ++A+IN  CK   +++      +M+  GV+PD  
Sbjct: 653 VKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQE 712

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            +  +++ F   G +    EL   M+  G  HD
Sbjct: 713 IFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 5/207 (2%)

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           ++      + V DA+ +  +M  + +RPS+ TYN+LL  L     + D    I     + 
Sbjct: 89  MLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIK----DS 144

Query: 430 VVPDSF-TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
             P S  T +  +DGLC      +AV   +     +    + ++N +++  CK+G    A
Sbjct: 145 GTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVA 204

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
              F  +   G +PD  + + +IH L   G M++A +L  DME +   P  VT+  + +G
Sbjct: 205 KSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKG 264

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           F      S    ++ KM  ++ +  DL
Sbjct: 265 FHLLGLMSGAREIIQKMLTDEGLKPDL 291


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 243/472 (51%), Gaps = 11/472 (2%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +LLT  A  + + T + L+ R+ S  L      L+ L++ L     ++ AF +   + R 
Sbjct: 427 LLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALP----SAPAFALFADMFRL 482

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
                T TFN ++  LC+ G+   A  L +++      PN VT+NT+I G C       A
Sbjct: 483 RLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAA 538

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR-NINPNVITYNS 264
           L +  EM  E G I  P+  TY ++I G CK G VD+A ++  +M  +  + P  + YN+
Sbjct: 539 LDIMREM-RERGGIA-PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 596

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI G+C       A      M++ GV   V T+N +++    DG+  +   L+E M  +G
Sbjct: 597 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 656

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PD  TYN L++G C  G + +A E+F +M  +G R  V +Y  LI A  K  +V++  
Sbjct: 657 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 716

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ E +   IRP ++ YN L++     GN+  A +++ +M+   + PD  T+ T + GL
Sbjct: 717 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 776

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G V EA ++   +     +  + TYN LI+G    G +K A ++ + + +KG  P +
Sbjct: 777 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 836

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
           +T + +I  LCK GQ D A +++ +M      P + T+ +L+ G    ++++
Sbjct: 837 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 888



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 246/501 (49%), Gaps = 18/501 (3%)

Query: 97  YDTVVSLFKRLNSNGLFPDL-----FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
           + +V+S  K L+   + P L      + NLL+     +   + +  +  R+       +T
Sbjct: 398 FKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIST 457

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            + + L++ L +       A +F+ L +  C     TFN ++  LC       AL+L  +
Sbjct: 458 ASLHPLLSALPSAPAFALFADMFR-LRLPLC---TTTFNIMLRHLCSAGKPARALELLRQ 513

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVITYNSLICGFC 270
           M        +P+ VTYN++I G C  G V  A +++ +M++R  I PN  TY ++I G+C
Sbjct: 514 M-------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 566

Query: 271 CVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
            V    EA  +F EM+  G V+P+ V +NA+I   C  GK+D      + M++RGV    
Sbjct: 567 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 626

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN L+    + GR + A EL   M  KG   DV++YNILIN +CK+  V+ A+ ++  
Sbjct: 627 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 686

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +R +V+TY  L+  L + G + +  KL D+     + PD   +   I+    +G 
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 746

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           +  A ++   +   +      TYN L+ GLC +GR+  A KL   +  +G  PD+VT +T
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I     +G +  A  +  +M  K   P+ +T+  L++G  +N +      ++ +M    
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866

Query: 570 LVVSDLSLSSKVVDLLSKDKK 590
           +   D +  S +  L ++D++
Sbjct: 867 ITPDDSTYISLIEGLTTEDER 887



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 193/375 (51%), Gaps = 5/375 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMG 130
           +++  P P   ++  ++       +    + + + +    G+ P+ +    +I+  CK+G
Sbjct: 510 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 569

Query: 131 ITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
               A  V   +L +    P  V +N LI G C +G++  A     ++        V T+
Sbjct: 570 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 629

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N L++ L        A +L EEM    G    PDV TYN +I+G CK+G V KA E+   
Sbjct: 630 NLLVHALFMDGRGTEAYELVEEM---GGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 686

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  R +   V+TY +LI         +E   LF E +  G++PD+V +NA+IN +   G 
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 746

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+   ++  M ++ + PD VTYN+LM G CL+GR+  AR+L   M  +G + D+ +YN 
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+       V+DA+ +  EM+++   P+++TYN L+ GL + G   DA  ++ +M  N 
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866

Query: 430 VVPDSFTFATYIDGL 444
           + PD  T+ + I+GL
Sbjct: 867 ITPDDSTYISLIEGL 881



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 152/277 (54%), Gaps = 3/277 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ + D M++   +  + ++ +L+  L  + +      L + +   GL PD+F  N+L
Sbjct: 608 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 667

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G    A  +   + R       VT+  LI  L  +G++ E  +LF +      
Sbjct: 668 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 727

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++V +N LIN    + N   A ++  EM  +  A   PD VTYN+++ GLC  G VD+
Sbjct: 728 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA---PDDVTYNTLMRGLCLLGRVDE 784

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++L+ +M +R I P+++TYN+LI G+    D K+A  +  EMM+ G  P ++T+NA+I 
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
             CK+G+ D    +++ M++ G+ PD  TY SL++G 
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 174/349 (49%), Gaps = 11/349 (3%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMI-KMKPSPGMTSFTILLTMLAKN 94
           ++ + +  GT I+ +     K G +  +EAV  FD M+ K +  P    +  L+      
Sbjct: 551 IAPNQYTYGTVISGWC----KVGRV--DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604

Query: 95  KQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTF 154
            + DT +    R+   G+   +   NLL++ L   G  + A+ ++  +      P+  T+
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N LING C EG + +A  +F+ ++       VVT+  LI  L +        KLF+E V 
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                 +PD+V YN++I+     G +D+A E++ +M+ + I P+ +TYN+L+ G C +  
Sbjct: 725 RG---IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 781

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
             EA+ L  EM + G+QPD+VT+N +I+     G +    R+   M+ +G NP  +TYN+
Sbjct: 782 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 841

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA-NCKDQKVED 382
           L+ G C  G+   A  +   MV  G   D  +Y  LI     +D++  D
Sbjct: 842 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAID 890


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 135/385 (35%), Positives = 206/385 (53%), Gaps = 5/385 (1%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN--V 179
           +I  LCK G    A  +L  +++  + P+  T + LIN LC   +I EA    + +N  +
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
                +  ++N+L+N LC+ +    A  +F  MV+E   +  PDVV+Y+ +IDG CK   
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVV--PDVVSYSILIDGFCKIDE 172

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           + +A++L  QM D N  PNV TYN+ + G        +A+ ++ EM+  G  PDV+T++ 
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+      K D+ + L E MI RG  P+ VTYN L+ G C   +   A ELF  MV +G
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  D  +Y  L+   C   K+E AV ++ EM+S+   P V+ YN LL G F+ G  G+A 
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAR 352

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNCLING 478
           +L   M   +  PD+ +    IDGL K   + +AV+VF+ + ++  C   + TYN LI G
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 412

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPD 503
           LC   RL  A K+F  +      PD
Sbjct: 413 LCGEQRLSEAMKVFKEIDRLKLSPD 437



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 223/402 (55%), Gaps = 7/402 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           ++  L K  + D+ +SL + +   G  PD+   ++LIN LCK      A   L  + R+ 
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114

Query: 147 FTPNT--VTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTL 203
            T  +   ++N L+N LC   ++ +A  +F  + +  +  P+VV+++ LI+G C+     
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A KL+++M++     C P+V TYN+ ++GL + G +  A+ +  +M     +P+VITY+
Sbjct: 175 RAEKLYKQMID---LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYS 231

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI GF       +A  LF  M+  G +P+ VT+N +++  CK+ K D+ + L   M++R
Sbjct: 232 TLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 291

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G +PD VTY +L+ GFC VG+I +A E+F  MVSKG   DV +YN L+    +  K  +A
Sbjct: 292 GCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEA 351

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTFATYID 442
             L++ M+S   +P  +++N ++ GL +   L DA+++ ++M Q +   PD  T+ + I 
Sbjct: 352 RQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIF 411

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           GLC    + EA++VF+ I   K       +N L+  +   G 
Sbjct: 412 GLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 205/397 (51%), Gaps = 9/397 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS--NGLF 113
           K+G + S  A+   + MIK    P M + ++L+  L K  +        + +N   +   
Sbjct: 61  KAGRVDS--ALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRA 118

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
              F  N L+N LCK      AF +   ++      P+ V+++ LI+G C    +  A +
Sbjct: 119 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEK 178

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           L+K++    C PNV T+N  +NGL R      A  ++EEM++   A C PDV+TY+++I 
Sbjct: 179 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMIS---AGCSPDVITYSTLIH 235

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G       D+A EL   M  R   PN +TYN L+ G C      EA  LF +M++ G  P
Sbjct: 236 GFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDP 295

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D VT+  ++   C  GK+++   + + M+ +G +PD V YN L+ GF   G+   AR+LF
Sbjct: 296 DKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLF 355

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVITYNTLLSGLFQ 411
             MVS+ C+ D  S+NI+I+   K ++++DAV ++  M  +    P ++TYN+L+ GL  
Sbjct: 356 QVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCG 415

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
              L +A+K+  ++    + PD   F   ++ +   G
Sbjct: 416 EQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 217/405 (53%), Gaps = 3/405 (0%)

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T + +I  LC  GR+  A  L + +      P++ T + LIN LC+      A +  + M
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLICGFCC 271
            N   +       +YNS+++ LCK   V +A  +   M  +R++ P+V++Y+ LI GFC 
Sbjct: 111 -NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCK 169

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
           +D+   A+ L+ +M+D    P+V T+NA +N   + G++     + E MI  G +PD +T
Sbjct: 170 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVIT 229

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y++L+ GF L  +  +A ELF +M+S+GCR +  +YN L++  CK+ K ++A  L+R+M+
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
                P  +TY TLL G   VG +  A+++ D+M      PD   +   + G  + G   
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL-QHKGPIPDVVTCSTM 510
           EA Q+FQ + + +C+    ++N +I+GL K  RL  A ++F R+ Q  G  PD+VT +++
Sbjct: 350 EARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 409

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           I  LC E ++ +A  +  +++     P    F  LL        K
Sbjct: 410 IFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGHK 454



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 188/334 (56%), Gaps = 5/334 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           S+  LL  L K K+     ++F  + S   + PD+   ++LI+  CK+     A  +  +
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           ++     PN  T+N  +NGL  +GRI +A  +++++    C P+V+T++TLI+G    R 
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A +LFE M++     C+P+ VTYN ++ GLCK+   D+A EL  +M +R  +P+ +T
Sbjct: 243 HDQAHELFEAMISRG---CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVT 299

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y +L+ GFC V   ++A  +F EM+  G  PDVV +N ++    + GK  +  +L ++M+
Sbjct: 300 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV 359

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS-KGCRHDVYSYNILINANCKDQKV 380
            R   PDTV++N ++DG     R+  A E+F  M    GC  D+ +YN LI   C +Q++
Sbjct: 360 SRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRL 419

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
            +A+ +++E+   ++ P    +N LL  ++  G+
Sbjct: 420 SEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 204/421 (48%), Gaps = 5/421 (1%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N V +   + GLC++     A +    M     +   P   T +S+I  LCK G VD A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV---VTFNAMI 301
            LL  M  R   P++ T++ LI   C  D  +EA+  F++ M+  +        ++N+++
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ-EFLQGMNRTISTRASSCFSYNSLL 128

Query: 302 NYNCKDGKMDKVNRLLELMI-QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           N  CK  K+ +   +   M+ +R V PD V+Y+ L+DGFC +  + RA +L+  M+   C
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V +YN  +N   +  ++ DA  +Y EM+S    P VITY+TL+ G         A +
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L + M      P++ T+   + GLCK     EA ++F+ +    C+    TY  L+ G C
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
            +G+++ A ++F  +  KG  PDVV  + ++    + G+  +A  L   M ++ C P  V
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTV 368

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRH 600
           +   ++ G  +  +    V +  +M  +     DL   + ++  L  +++  E +  F+ 
Sbjct: 369 SHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKE 428

Query: 601 L 601
           +
Sbjct: 429 I 429



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 133/259 (51%), Gaps = 6/259 (2%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           T+   FLN   + G I   + VY  + MI    SP + +++ L+   +  +++D    LF
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVY--EEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
           + + S G  P+    N L++ LCK      A  +  +++     P+ VT+  L+ G C  
Sbjct: 251 EAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNV 310

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           G+I +A  +F ++     DP+VV +N L+ G  R      A +LF+ MV+     CKPD 
Sbjct: 311 GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR---ECKPDT 367

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V++N +IDGL K   +D A E+  +M +D   +P+++TYNSLI G C      EA  +F 
Sbjct: 368 VSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFK 427

Query: 284 EMMDNGVQPDVVTFNAMIN 302
           E+    + PD   FN ++ 
Sbjct: 428 EIDRLKLSPDPHAFNVLLE 446


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 234/456 (51%), Gaps = 11/456 (2%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P   VL++L++   K G    A  V+  +      P     N L+  L       +A  L
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLR----ADAMEL 226

Query: 174 FKKLNVF----ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
             KL  F       P+V T++T I   C+ R+   A K+FEEM       C  + VTYN 
Sbjct: 227 LWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRR---DCAMNEVTYNV 283

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I GLC+ G V++A     +M D  ++P+  TY +L+ G C     KEAK L  EM  +G
Sbjct: 284 MISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSG 343

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++P++V +  +++   K+GK  +   +L+ MI  GV P+ + Y++L+ G C +G++ RA 
Sbjct: 344 LKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRAS 403

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   M+  G R D ++YN L+  + +    + A  L  EM +  I P+V +Y  +++GL
Sbjct: 404 KLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGL 463

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            Q G   +A  L+++M    + P++F +A  I G  K G +  A +  + +        +
Sbjct: 464 CQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDL 523

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
             YN LI GL  +GR++ A + + ++Q +G +PD  T S +IH  CK G ++KA+ LL  
Sbjct: 524 FCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQ 583

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           M      P+  T+  LL G+ ++N   KV  +L  M
Sbjct: 584 MLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM 619



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/588 (27%), Positives = 258/588 (43%), Gaps = 73/588 (12%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++ ++++ L ++   +      + +   GL PD F    L+N LCK      A  +L  +
Sbjct: 280 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM 339

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
             S   PN V +  L++G   EG+  EA  + K++      PN + ++ LI GLC+    
Sbjct: 340 SCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQL 399

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A KL +EM+       +PD  TYN ++ G  +    D A ELL +M++  I PNV +Y
Sbjct: 400 GRASKLLKEMIK---VGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSY 456

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             +I G C   + KEA  L  EM+  G++P+   +  +I  + K+G +      LE M +
Sbjct: 457 GIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTK 516

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
             V+PD   YNSL+ G   VGR+  A E +  +  +G   D ++Y+ LI+  CK   +E 
Sbjct: 517 ANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEK 576

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNL-------------GD------------ 417
           A  L R+ML+  ++P+  TY  LL G F+  +              GD            
Sbjct: 577 ADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIR 636

Query: 418 ----------ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
                     A  ++ +++ N +VPD   +++ I GLCK   + +AV +   +     E 
Sbjct: 637 NLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEP 696

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            I  YN LI+G C+ G +  A  +F  +  KG +P+ VT + +I   CK G +  A DL 
Sbjct: 697 GIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLY 756

Query: 528 LDMEAKNCVPSEVT----------------------------------FCTLLRGFVQNN 553
            +M  +   P                                      F TL+ GF +  
Sbjct: 757 KEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRG 816

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           K  +   LLH M  ++ +V +     KVV    K  K  E    F  L
Sbjct: 817 KLQETEKLLHVM-MDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAEL 863



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 243/537 (45%), Gaps = 4/537 (0%)

Query: 34  TDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK 93
           TD  S      T++   L D +K      N A      M  +  +P       LL  L +
Sbjct: 162 TDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVL-MMADLGLAPTRRCCNGLLKDLLR 220

Query: 94  NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVT 153
               + +  L   +   G+ PD++  +  I   CK      A  V   + R     N VT
Sbjct: 221 ADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVT 280

Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
           +N +I+GLC  G + EA    +++  +   P+  T+  L+NGLC+      A  L +EM 
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340

Query: 214 NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
               +  KP++V Y +++DG  K+G   +A ++L +M    + PN I Y++LI G C + 
Sbjct: 341 C---SGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIG 397

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
               A  L  EM+  G++PD  T+N ++  + +    D    LL  M   G+ P+  +Y 
Sbjct: 398 QLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYG 457

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            +++G C  G    A  L   M+S+G + + + Y  LI  + K+  +  A     +M   
Sbjct: 458 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKA 517

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            + P +  YN+L+ GL  VG + +A +   ++Q   +VPD FT++  I G CK G + +A
Sbjct: 518 NVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKA 577

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
            Q+ + + N   +   +TY  L+ G  K    +    +   +   G  PD      +I  
Sbjct: 578 DQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRN 637

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           L +   M+ A  +L ++E    VP    + +L+ G  +     K V LL +MA E L
Sbjct: 638 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGL 694



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/583 (25%), Positives = 263/583 (45%), Gaps = 80/583 (13%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +SG +   EA  F + M+    SP   ++  L+  L K  +     +L   ++ +GL P+
Sbjct: 290 RSGAV--EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPN 347

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           + V   L++   K G T+ AF +L  ++ +   PN + ++ LI GLC  G++  A++L K
Sbjct: 348 IVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLK 407

Query: 176 KL-------NVFACDP----------------------------NVVTFNTLINGLCRTR 200
           ++       + F  +P                            NV ++  +INGLC+  
Sbjct: 408 EMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNG 467

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            +  A  L EEM++E     KP+   Y  +I G  K+G +  A E L +M   N++P++ 
Sbjct: 468 ESKEAGNLLEEMISEG---LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLF 524

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            YNSLI G   V   +EA+  + ++   G+ PD  T++ +I+  CK G ++K ++LL  M
Sbjct: 525 CYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQM 584

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI----------- 369
           +  G+ P+  TY  L++G+       +   +  SM+  G + D + Y I           
Sbjct: 585 LNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENM 644

Query: 370 ------------------------LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
                                   LI+  CK   +E AV L  EM  E + P ++ YN L
Sbjct: 645 EVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNAL 704

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + G  + G++  A  + D +    +VP+  T+   IDG CKNG + +A  +++ + +   
Sbjct: 705 IDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGI 764

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                 YN L  G      L+ A  L   + ++G   +V   +T++H  CK G++ +   
Sbjct: 765 APDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YANVSLFNTLVHGFCKRGKLQETEK 823

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           LL  M  +  VP+  T   ++  F +  K  +     H++ AE
Sbjct: 824 LLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEA----HRVFAE 862



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 154/303 (50%), Gaps = 6/303 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN+   +A      M+     P   ++T LL    K+  Y+ V S+ + +  +G  PD
Sbjct: 570 KTGNL--EKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPD 627

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             +  ++I  L +      AF+VL  + ++   P+   ++ LI+GLC    + +A  L  
Sbjct: 628 NHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLD 687

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++     +P +V +N LI+G CR+ +   A  +F+ ++ + G +  P+ VTY ++IDG C
Sbjct: 688 EMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAK-GLV--PNCVTYTALIDGNC 744

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G +  A +L  +M DR I P+   YN L  G     D ++A  L  EM + G   +V 
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVS 803

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            FN +++  CK GK+ +  +LL +M+ R + P+  T   ++  F   G++  A  +F  +
Sbjct: 804 LFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAEL 863

Query: 356 VSK 358
             K
Sbjct: 864 QQK 866


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 257/494 (52%), Gaps = 15/494 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ FF   I     P ++SF ILL   A    ++ V +L + + + G+  +     ++
Sbjct: 14  SDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVI 70

Query: 123 INCLCKMGITSGAFVVLG-------RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++ LC       A            R+  +   P++VT+  +++GL   G        ++
Sbjct: 71  LSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYE 130

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+    C+P ++T+  L++GLC+      A  +FEEM+ +     KPD++ Y+S+IDGL 
Sbjct: 131 KMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGH---KPDIIAYSSLIDGLS 187

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G VD+A++L+  M  R   P  + Y S++ G C     +EA     EM    ++P V 
Sbjct: 188 KAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD 247

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T++ ++      GK+++   ++E M  R   PDT++Y   ++    +GR   A ++F +M
Sbjct: 248 TYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM 307

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V KGC+ D+++Y I+I+  CK+  +  A  + R M    ++P+   Y  ++ G  +   L
Sbjct: 308 VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRL 367

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR--IETYN 473
            +AL+L  ++  + ++P + T+ T I+ LCK   + EA+++ + ++  K EL   I TY+
Sbjct: 368 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYS 427

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +I+GL K+G  + A  L   +   G IPD  T +++I  L   G++ +A +LL +M   
Sbjct: 428 MIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKA 487

Query: 534 NCVPSEVTFCTLLR 547
              P + T+ TL++
Sbjct: 488 GIFPDDHTYGTLVQ 501



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 216/452 (47%), Gaps = 9/452 (1%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N L+  L + G  S A   LG    S   PN  +FN L+ G  A         L +++  
Sbjct: 1   NSLLLALVRGGQLSDA---LGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKA 57

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLF----EEMVNEFGAICKPDVVTYNSIIDGLC 235
                N  T   +++ LC  R+   A+  F    EE    F AI  PD VTY +I+DGL 
Sbjct: 58  RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLF 117

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G  D   E   +M      P ++TY  L+ G C     + A  +F EM+  G +PD++
Sbjct: 118 KAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDII 177

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            ++++I+   K G++D+  +L++LMI RG  P  V Y S++ G C  GRI  A +    M
Sbjct: 178 AYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEM 237

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +  R  V +Y+ ++       KVE+A  +  EM      P  I+Y   +  L+ +G  
Sbjct: 238 RRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRR 297

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A K+ + M      PD  T+   ID  CK G +  A  V + +     +     Y  +
Sbjct: 298 EEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMI 357

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK-- 533
           ++G  K  RL+ A +L+ R+   G +P  VT +T+I+ LCK  +MD+A +LL +M+ +  
Sbjct: 358 MDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKE 417

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
              PS VT+  ++ G  +   + +   LL +M
Sbjct: 418 ELEPSIVTYSMIIHGLGKVGMEERAFDLLAEM 449



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 223/450 (49%), Gaps = 10/450 (2%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N  + EA   F+ +     +P   ++T ++  L K   YD  +  ++++ ++   P L  
Sbjct: 88  NSRTEEACRLFEAI----EAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLT 143

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
             +L++ LCK      A  V   ++R    P+ + ++ LI+GL   GR+ EA +L   + 
Sbjct: 144 YTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMI 203

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                P  V + +++ GLC+      A+K  +EM        +P V TY+ I+ G    G
Sbjct: 204 ARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRR---RRLRPRVDTYSFIVTGYIGMG 260

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V++A  ++ +M DR+  P+ I+Y   I     +   +EA+ +F  M++ G +PD+ T+ 
Sbjct: 261 KVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYG 320

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I+  CK+G M     +L LM +  V P+   Y  +MDGF    R+  A EL+  ++  
Sbjct: 321 IIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKD 380

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREML--SERIRPSVITYNTLLSGLFQVGNLG 416
           G      +YN +INA CK +K+++A+ L REM    E + PS++TY+ ++ GL +VG   
Sbjct: 381 GILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEE 440

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A  L+ +M  N V+PD FT+ + I  L   G V  A+++ + +          TY  L+
Sbjct: 441 RAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLV 500

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
             LC+   +  A  L   +   G  P+  T
Sbjct: 501 QILCR-SDVDAAWDLLQEMMRNGHTPNEFT 529



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 161/354 (45%), Gaps = 37/354 (10%)

Query: 40  HFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT 99
           H  D  + +  ++   K+G +  +EA    D MI   P P   ++T ++  L K  +   
Sbjct: 172 HKPDIIAYSSLIDGLSKAGRV--DEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQE 229

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
            V   + +    L P +   + ++     MG    AF V+  +      P+T+++   I 
Sbjct: 230 AVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIE 289

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA---LKL-------- 208
            L + GR  EA ++F+ +    C P++ T+  +I+  C+  +   A   L+L        
Sbjct: 290 ALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKP 349

Query: 209 -----------------FEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELL 247
                             EE +  +  I K    P  VTYN++I+ LCK   +D+A ELL
Sbjct: 350 NRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELL 409

Query: 248 LQMKDR--NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
            +M+ R   + P+++TY+ +I G   V   + A  L  EM+DNGV PD  T+ ++I    
Sbjct: 410 REMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLA 469

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             GK+ +   LLE M++ G+ PD  TY +L+   C    +  A +L   M+  G
Sbjct: 470 GAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNG 522



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 2/273 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA    + M     +P   S+T+ +  L    + +    +F+ +   G  PD+    ++
Sbjct: 263 EEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGII 322

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK G  + A  VL  + ++   PN   +  +++G     R+ EA  L++++     
Sbjct: 323 IDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGI 382

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ VT+NT+IN LC+ +    AL+L  EM      + +P +VTY+ II GL K G  ++
Sbjct: 383 LPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL-EPSIVTYSMIIHGLGKVGMEER 441

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +M D  + P+  TY SLI           A  L  EM+  G+ PD  T+  ++ 
Sbjct: 442 AFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQ 501

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
             C+   +D    LL+ M++ G  P+  T+ ++
Sbjct: 502 ILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAV 533


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/499 (31%), Positives = 238/499 (47%), Gaps = 11/499 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +   +A   FD M +    P + ++  ++   +K  + +  + + + +  NG  PD
Sbjct: 185 KSGRV--GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 242

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +  N LI  LC    T  A  +L   ++  FTP  VTF  LING C   +  +A R+  
Sbjct: 243 DWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 301

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA-ICKPDVVTYNSIIDGL 234
           K+    C  ++  F  LIN L +       LK  +E++NE  A    P+V+TY SIIDG 
Sbjct: 302 KMMSSKCKLDLQVFGKLINSLIKKDR----LKEAKELLNEISANGLVPNVITYTSIIDGY 357

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK G VD A E+L  M+     PN  TYNSL+ G        +A  L  +M  +G+ P+V
Sbjct: 358 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 417

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +T+  ++   C +   D   RL E+M Q G+ PD   Y  L D  C  GR   A E +  
Sbjct: 418 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSF 474

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           +V KG       Y  LI+   K    + A  L   M+ E   P   TY+ LL  L +   
Sbjct: 475 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 534

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +AL ++D+M L  +    F +   ID + + G    A +++  + +   +    TY  
Sbjct: 535 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 594

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
            IN  CK GRL+ A  L  +++ +G  PDVVT + +I      G +D+A   L  M   +
Sbjct: 595 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGAS 654

Query: 535 CVPSEVTFCTLLRGFVQNN 553
           C P+  T+C LL+  ++ N
Sbjct: 655 CEPNYWTYCLLLKHLLKGN 673



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 250/512 (48%), Gaps = 9/512 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G++T+  A  +F  +++    P   +   L+    +  +      LF  +   G   +
Sbjct: 80  KEGDLTT--AHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRN 137

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +   +LI  LC       A V+   + R   +PN   F FLI+GLC  GR+ +A  LF 
Sbjct: 138 EYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFD 197

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      P+V+T+N +I G  +      ALK+ +E++ + G  C PD  TYN++I GLC
Sbjct: 198 AMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG--CHPDDWTYNTLIYGLC 254

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            D   ++A+ELL         P V+T+ +LI G+C  + + +A  +  +MM +  + D+ 
Sbjct: 255 -DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 313

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            F  +IN   K  ++ +   LL  +   G+ P+ +TY S++DG+C  G++  A E+   M
Sbjct: 314 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 373

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              GC+ + ++YN L+    KD+K+  A+ L  +M  + I P+VITY TLL G     + 
Sbjct: 374 ERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDF 433

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A +L + M+ N + PD   +A   D LCK G    A + +  I      L    Y  L
Sbjct: 434 DNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTL 490

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+G  K G    A  L  R+  +G  PD  T S ++H LCK+ ++++A  +L  M  +  
Sbjct: 491 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 550

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
             +   +  L+   ++  K      + ++M +
Sbjct: 551 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 582



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 211/481 (43%), Gaps = 22/481 (4%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   ++  L+  L K+K+    ++L  ++  +G+ P++     L+   C       AF 
Sbjct: 379 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 438

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   + ++   P+   +  L + LC  GR  EA     +  V       V + TLI+G  
Sbjct: 439 LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTK---VYYTTLIDGFS 495

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  NT  A  L E M++E    C PD  TY+ ++  LCK   +++A  +L QM  R I  
Sbjct: 496 KAGNTDFAATLIERMIDEG---CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 552

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
            +  Y  LI           AK ++ EM  +G +P   T+   IN  CK+G+++    L+
Sbjct: 553 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 612

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + GV PD VTYN L+DG   +G I RA      MV   C  + ++Y +L+    K 
Sbjct: 613 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 672

Query: 378 Q----------------KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
                            +++    L   M+   + P+V TY++L++G  + G L +A  L
Sbjct: 673 NLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 732

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +D M    + P+   +   I   C   F  +A+     +  C  + ++E+Y  L+ GLC 
Sbjct: 733 LDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 792

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G  +    LF  L   G   D V    +   L K G +D    +L  ME + C  S  T
Sbjct: 793 EGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQT 852

Query: 542 F 542
           +
Sbjct: 853 Y 853



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 178/360 (49%), Gaps = 69/360 (19%)

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           ++ +++ +G+ PD VT+N MI   CK+G +   +R   L+++ G+ P+T T N+L+ G+C
Sbjct: 55  VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 114

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNI------------------------------- 369
             G + +A  LF+ M   GC+ + YSY I                               
Sbjct: 115 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 174

Query: 370 ----LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
               LI+  CK  +V DA  L+  M    + PSV+TYN ++ G  ++G + DALK+ + M
Sbjct: 175 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 234

Query: 426 QLNDVVPDSFTFATYIDGLCK-----------------------------NGFVL----- 451
           + N   PD +T+ T I GLC                              NG+ +     
Sbjct: 235 EKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 294

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A+++   + + KC+L ++ +  LIN L K  RLK A +L + +   G +P+V+T +++I
Sbjct: 295 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 354

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
              CK G++D A ++L  ME   C P+  T+ +L+ G V++ K  K + LL KM  + ++
Sbjct: 355 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 414



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 189/427 (44%), Gaps = 74/427 (17%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N  +  L R   T    +++ ++V + G +  PD VTYN++I   CK+G +  A     
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQD-GLL--PDTVTYNTMIKSYCKEGDLTTAHRYFR 92

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWK-----------------------------EAK 279
            + +  + P   T N+L+ G+C   + +                             +AK
Sbjct: 93  LLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAK 152

Query: 280 C------LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           C      LF+ M  +G  P+V  F  +I+  CK G++     L + M Q GV P  +TYN
Sbjct: 153 CVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYN 212

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +++ G+  +GR++ A ++   M   GC  D ++YN LI   C DQK E+A  L    + E
Sbjct: 213 AMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKE 271

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKM---------------------------- 425
              P+V+T+  L++G        DAL++ +KM                            
Sbjct: 272 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 331

Query: 426 -------QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
                    N +VP+  T+ + IDG CK+G V  A++V + +    C+    TYN L+ G
Sbjct: 332 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 391

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L K  +L  A  L  ++Q  G IP+V+T +T++   C E   D A  L   ME     P 
Sbjct: 392 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 451

Query: 539 EVTFCTL 545
           E  +  L
Sbjct: 452 EHAYAVL 458



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 191/450 (42%), Gaps = 53/450 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF-- 136
           P + ++T LL        +D    LF+ +  NGL PD     +L + LCK G    A+  
Sbjct: 415 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 474

Query: 137 ------------------------------VVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
                                          ++ R++    TP++ T++ L++ LC + R
Sbjct: 475 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 534

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           + EA  +  ++++      +  +  LI+ + R      A +++ EM +      KP   T
Sbjct: 535 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH---KPSATT 591

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y   I+  CK+G ++ A++L+L+M+   + P+V+TYN LI G   +     A      M+
Sbjct: 592 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 651

Query: 287 DNGVQPDVVTFNAMINYNCKDG----------------KMDKVNRLLELMIQRGVNPDTV 330
               +P+  T+  ++ +  K                  ++D   +LLE M++ G+NP   
Sbjct: 652 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 711

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TY+SL+ GFC  GR+  A  L   M  KG   +   Y +LI   C  +  E A+     M
Sbjct: 712 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 771

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLI-DKMQLNDVVPDSFTFATYIDGLCKNGF 449
                +P + +Y  L+ GL   G+      L  D ++L     D   +    DGL K G+
Sbjct: 772 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG-YNHDEVAWKILNDGLLKAGY 830

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           V    Q+   +    C +  +TY  + N +
Sbjct: 831 VDICFQMLSIMEKRYCCISSQTYALVTNKM 860



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 147/331 (44%), Gaps = 21/331 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN  ++ A    + MI    +P   ++++LL  L K K+ +  + +  +++  G+   
Sbjct: 496 KAGN--TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 553

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F   +LI+ + + G    A  +   +  S   P+  T+   IN  C EGR+ +A  L  
Sbjct: 554 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 613

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+      P+VVT+N LI+G         A    + MV   GA C+P+  TY  ++  L 
Sbjct: 614 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV---GASCEPNYWTYCLLLKHLL 670

Query: 236 KDGF----------------VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           K                   +D   +LL +M    +NP V TY+SLI GFC     +EA 
Sbjct: 671 KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 730

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L   M   G+ P+   +  +I   C     +K    + +M + G  P   +Y  L+ G 
Sbjct: 731 LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGL 790

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           C  G   + + LF  ++  G  HD  ++ IL
Sbjct: 791 CNEGDFEKVKSLFCDLLELGYNHDEVAWKIL 821



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 21/327 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+   D M        + ++TIL+  + +  ++D    ++  + S+G  P      + 
Sbjct: 536 NEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVF 595

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G    A  ++ ++ R    P+ VT+N LI+G    G I  A    K++   +C
Sbjct: 596 INSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASC 655

Query: 183 DPNVVTFNTLINGL-------CRTRNTL---------VALKLFEEMVNEFGAICKPDVVT 226
           +PN  T+  L+  L        R+ +T          +  +L E MV        P V T
Sbjct: 656 EPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHG---LNPTVTT 712

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+S+I G CK G +++A  LL  M  + ++PN   Y  LI   CC   + E    F+ +M
Sbjct: 713 YSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI-KCCCDTKFFEKALSFVSIM 771

Query: 287 DN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
              G QP + ++  ++   C +G  +KV  L   +++ G N D V +  L DG    G +
Sbjct: 772 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 831

Query: 346 SRARELFVSMVSKGCRHDVYSYNILIN 372
               ++   M  + C     +Y ++ N
Sbjct: 832 DICFQMLSIMEKRYCCISSQTYALVTN 858



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 49/114 (42%)

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           +A+Q  +   + +  L  + YN  +  L +    +   +++ +L   G +PD VT +TMI
Sbjct: 16  DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 75

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
              CKEG +  A+     +      P   T   L+ G+ +  +  K   L   M
Sbjct: 76  KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 129


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 259/503 (51%), Gaps = 3/503 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  +      P   S T+LL  L K KQ+   +++F  +  +   P  F+    
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I    K+        +  R+      P+   +N LI+GLC   R+ +A +LF ++     
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+++T+NTLI+G C+  N   + K+ E M  +     +P ++T+N+++ GL K G V+ 
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH---IEPSLITFNTLLKGLFKAGMVED 302

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ +L +MKD    P+  T++ L  G+   +  + A  ++   +D+GV+ +  T + ++N
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK++K   +L   + +G+ P+ V YN+++DG+C  G +  AR    +M  +G + 
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +YN LI   C+  ++E+A     +M  + + PSV TYN L+ G  +         ++
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M+ N  +P+  ++ T I+ LCK   +LEA  V + + +     ++  YN LI+G C  
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G+++ A +    +  KG   ++VT +T+I  L   G++ +A DLLL++  K   P   T+
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602

Query: 543 CTLLRGFVQNNKKSKVVVLLHKM 565
            +L+ G+       + + L  +M
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEM 625



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/543 (25%), Positives = 258/543 (47%), Gaps = 42/543 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            + +  F+ M   +  P +  + +L+  L K K+ +    LF  + +  L P L   N L
Sbjct: 196 GKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK G    +F V  R+      P+ +TFN L+ GL   G + +A  + K++     
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  TF+ L +G         AL ++E  V+   +  K +  T + +++ LCK+G ++K
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVD---SGVKMNAYTCSILLNALCKEGKIEK 372

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+E+L +   + + PN + YN++I G+C   D   A+     M   G++PD + +N +I 
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF----------------------- 339
             C+ G+M+   + +  M  +GV+P   TYN L+ G+                       
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492

Query: 340 ------------CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
                       C   ++  A+ +   M  +G    V  YN+LI+  C   K+EDA    
Sbjct: 493 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS 552

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           +EML + I  +++TYNTL+ GL   G L +A  L+ ++    + PD FT+ + I G    
Sbjct: 553 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G V   + +++ ++    +  ++TY+ LI+ LC    ++   +LF  +  K   PD++  
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLK---PDLLVY 668

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + ++H     G M+KA +L   M  K+    + T+ +L+ G ++  K  +V  L+ +M A
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNA 728

Query: 568 EKL 570
            ++
Sbjct: 729 REM 731



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 224/455 (49%), Gaps = 9/455 (1%)

Query: 81  MTSFT--ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           M ++T  ILL  L K  + +    +  R  + GL P+  + N +I+  C+ G   GA + 
Sbjct: 352 MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMK 411

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  + +    P+ + +N LI   C  G +  A +   K+ +    P+V T+N LI G  R
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                    + +EM +  G +  P+VV+Y ++I+ LCK   + +A+ +   M+DR ++P 
Sbjct: 472 KYEFDKCFDILKEMEDN-GTM--PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V  YN LI G C     ++A     EM+  G++ ++VT+N +I+     GK+ +   LL 
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            + ++G+ PD  TYNSL+ G+   G + R   L+  M   G +  + +Y++LI+  C  +
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-CTKE 647

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +E    L+ EM    ++P ++ YN +L      G++  A  L  +M    +  D  T+ 
Sbjct: 648 GIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + I G  K G + E   +   +   + E   +TYN ++ G C++    +A   +  +Q K
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
           G + DV   + ++  L +E +  +A  ++ +M  +
Sbjct: 765 GFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 180/365 (49%), Gaps = 10/365 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + ++ IL+    +  ++D    + K +  NG  P++     LINCLCK      A +
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V   +     +P    +N LI+G C++G+I +A R  K++     + N+VT+NTLI+GL 
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            T     A  L  E+  +     KPDV TYNS+I G    G V +   L  +MK   I P
Sbjct: 576 MTGKLSEAEDLLLEISRKG---LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
            + TY+ LI   C  +  +  + LF EM    ++PD++ +N +++     G M+K   L 
Sbjct: 633 TLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + MI++ +  D  TYNSL+ G   VG++   R L   M ++    +  +YNI++  +C+ 
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ---LNDVVPDS 434
           +    A   YREM  +     V   N L+SGL +     +A  +I +M    L DV  D 
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTVDE 808

Query: 435 FTFAT 439
              AT
Sbjct: 809 DLSAT 813



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 127/246 (51%), Gaps = 1/246 (0%)

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           IS A +LF ++ ++G      S  +L++   K ++    + ++  +L    RPS   Y  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            +    ++ ++G  L+L ++M+ + + P  F +   IDGLCK   + +A Q+F  +   +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + TYN LI+G CK G  + + K+  R++     P ++T +T++  L K G ++ A 
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           ++L +M+    VP   TF  L  G+  +N+K++  + +++ A +  V  +    S +++ 
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGY-SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363

Query: 585 LSKDKK 590
           L K+ K
Sbjct: 364 LCKEGK 369



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 3/208 (1%)

Query: 346 SRARELF--VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           +  +ELF   S+ S   +HD +SY +L     + + + +A  L+  + +E I PS  +  
Sbjct: 90  ASPKELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLT 148

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            LL  L +       + +   +  +D  P  F +   I    K   V + +++F  +++ 
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 208

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           +    +  YN LI+GLCK  R+  A +LF  +  +  +P ++T +T+I   CK G  +K+
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
             +   M+A +  PS +TF TLL+G  +
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFK 296


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/386 (33%), Positives = 217/386 (56%), Gaps = 7/386 (1%)

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P+VV++NT+I+GL +  +   A   + EM++       PD VTYNSII  L K   +D
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRR---VSPDAVTYNSIIAALSKAQAMD 63

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A E+L  M    + PN  TYNS++ G+C     ++A  +F +M  +G++PDVVT+N+++
Sbjct: 64  RAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLM 119

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +Y CK+GK  +  ++ + M++RG+ PD  TY +L+ G+   G +    +L   MV  G +
Sbjct: 120 DYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQ 179

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D + +NILI A  K +KV++ V ++ +M  + + P+ + Y T++ GL ++G L DA+  
Sbjct: 180 LDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLN 239

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            ++M    + P+   + + I  LC      +A ++   I +      I  +N +++ LCK
Sbjct: 240 FEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCK 299

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            GR+  + KLF  L H G  PDV+T ST+I   C  G+MD A  LL  M +    P  VT
Sbjct: 300 EGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVT 359

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + TL+ G+ + N+    + L  +M +
Sbjct: 360 YSTLINGYCKINRMEDALALFKEMES 385



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 233/440 (52%), Gaps = 7/440 (1%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD+   N +I+ L K G    A++    +L    +P+ VT+N +I  L ++ + M+  R 
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAAL-SKAQAMD--RA 65

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            + L V    PN  T+N++++G C +  +  A+ +F +M ++     +PDVVTYNS++D 
Sbjct: 66  MEVLTVMVM-PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDG---IEPDVVTYNSLMDY 121

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK+G   +A+++   M  R + P++ TY +L+ G+       E   L   M+ NG+Q D
Sbjct: 122 LCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLD 181

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
              FN +I    K  K+D+V  +   M Q+G+ P+ V Y +++DG C +GR+  A   F 
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFE 241

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+ KG   +V  Y  LI+A C   K E A  L  E+L + I P+++ +NT+L  L + G
Sbjct: 242 QMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEG 301

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            + ++ KL D +    V PD  T++T IDG C  G +  A+++   + +   +    TY+
Sbjct: 302 RVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYS 361

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LING CK+ R++ A  LF  ++  G  PD++T + ++H L +  +   A +L   +   
Sbjct: 362 TLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITES 421

Query: 534 NCVPSEVTFCTLLRGFVQNN 553
                  T+  +L  F + N
Sbjct: 422 GTQLELSTYNIILMDFAKTN 441



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 213/415 (51%), Gaps = 38/415 (9%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    ++   K G++  ++A   +  M+  + SP   ++  ++  L+K +  D  + 
Sbjct: 10  DVVSYNTIIDGLFKEGDV--DKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAME 67

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +    + P+ F  N +++  C  G +  A  +  ++      P+ VT+N L++ LC
Sbjct: 68  VLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC------------------------R 198
             G+  EA ++F  +      P++ T+ TL++G                           
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183

Query: 199 TRNTLVALKLFEEMVNEFGAI--------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
             N L+     +E V+E   +          P+ V Y ++IDGLCK G +D A     QM
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
            D+ + PNV+ Y SLI   C  D W++A+ L  E++D G+ P++V FN +++  CK+G++
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
            +  +L +L+   GVNPD +TY++L+DG+CL G++  A +L   MVS G + D  +Y+ L
Sbjct: 304 IESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           IN  CK  ++EDA+ L++EM S  + P +ITYN +L GLF+      A +L  ++
Sbjct: 364 INGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARI 418



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 212/421 (50%), Gaps = 7/421 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+  ++  L K    D     +  +    + PD    N +I  L K      A  V
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  ++     PN  T+N +++G C+ G+  +A  +F+K+     +P+VVT+N+L++ LC+
Sbjct: 69  LTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A K+F+ MV       KPD+ TY +++ G    G + +  +LL  M    +  +
Sbjct: 125 NGKCTEARKIFDSMVKRG---LKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLD 181

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              +N LIC +   +   E   +F +M   G+ P+ V +  +I+  CK G++D      E
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFE 241

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MI +G+ P+ V Y SL+   C   +  +A EL   ++ +G   ++  +N ++++ CK+ 
Sbjct: 242 QMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEG 301

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +V ++  L+  +    + P VITY+TL+ G    G +  A+KL+  M    + PDS T++
Sbjct: 302 RVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYS 361

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T I+G CK   + +A+ +F+ + +      I TYN +++GL +  R   A +L+ R+   
Sbjct: 362 TLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITES 421

Query: 499 G 499
           G
Sbjct: 422 G 422



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 186/360 (51%), Gaps = 4/360 (1%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C PDVV+YN+IIDGL K+G VDKA     +M DR ++P+ +TYNS+I           A 
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRA- 65

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
              +E++   V P+  T+N++++  C  G+ +K   +   M   G+ PD VTYNSLMD  
Sbjct: 66  ---MEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  G+ + AR++F SMV +G + D+ +Y  L++       + +   L   M+   ++   
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
             +N L+    +   + + + +  KM+   + P++  + T IDGLCK G + +A+  F+ 
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           + +      +  Y  LI+ LC   + + A +L   +  +G  P++V  +T++  LCKEG+
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGR 302

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           + ++  L   +      P  +T+ TL+ G+    K    + LL  M +  L    ++ S+
Sbjct: 303 VIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYST 362



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 147/306 (48%), Gaps = 40/306 (13%)

Query: 285 MMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           M D+G   PDVV++N +I+   K+G +DK       M+ R V+PD VTYNS++       
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            + RA E+   MV   C    ++YN +++  C   + E A+ ++R+M S+ I P V+TYN
Sbjct: 61  AMDRAMEVLTVMVMPNC----FTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG----------------LCKN 447
           +L+  L + G   +A K+ D M    + PD  T+ T + G                + +N
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 448 GFVL-------------------EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
           G  L                   E V VF  +R          Y  +I+GLCK+GRL  A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
              F ++  KG  P+VV  +++IH LC   + +KA +L+ ++  +   P+ V F T+L  
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296

Query: 549 FVQNNK 554
             +  +
Sbjct: 297 LCKEGR 302



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/150 (20%), Positives = 65/150 (43%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E+   FD +  +  +P + +++ L+       + D  + L   + S GL PD    + LI
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  CK+     A  +   +  +   P+ +T+N +++GL    R   A  L+ ++      
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQ 424

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
             + T+N ++    +T + ++    F   V
Sbjct: 425 LELSTYNIILMDFAKTNSLMMHFGCFRTYV 454


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 246/470 (52%), Gaps = 3/470 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +LL+   + ++ D  +     +  N + P     N L++ L K+     A+ V   ++
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMV 209

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           +     + VTFN +IN LC EG+  +A      + V+   PNVVT+NT+ING C      
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A K+F+ M ++     KPD  TYNS I  LCK+  +++A  +L ++ +  + PN +TYN
Sbjct: 270 AASKIFKTMKDKN---LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI G C   D  +A     EMM+ G+   V T+N +I+    + ++++   +++ M ++
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           GV PD VTYN  ++G+C  G   +A  LF  MV K  R  V +Y  LI+   K  ++ +A
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
              +++ + E + P +I +N L+ G    GN+  A +L+ +M    VVPD  TF T + G
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C+   V EA ++   ++    +    +YN LI+G  K G +K A ++F  +   G  P 
Sbjct: 507 YCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPT 566

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           ++T + +I    K G+ D A +LL +M++K   P + T+  ++     N+
Sbjct: 567 LLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTND 616



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/425 (32%), Positives = 220/425 (51%), Gaps = 24/425 (5%)

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N++IN LC+ G    A   +G +      PN VT+N +ING C  G+   A+++FK
Sbjct: 217 IVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFK 276

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK-------PDVVTYN 228
            +      P+  T+N+ I+ LC+ R         EE     G +CK       P+ VTYN
Sbjct: 277 TMKDKNLKPDCYTYNSFISRLCKERR-------IEEAS---GVLCKLLESGLVPNAVTYN 326

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++IDG C  G +DKA     +M +R I  +V TYN LI         +EA+ +  EM + 
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           GV+PDVVT+N  IN  C+ G   K   L + M+++ + P   TY SL+D F    R+S A
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            E F   + +G   D+  +N LI+ +C +  ++ A  L +EM + ++ P  +T+NTL+ G
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             +   + +A KL+D+M+   + PD  ++ T I G  K G + +A++VF  + +   +  
Sbjct: 507 YCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPT 566

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + TYN LI G  K+G    A +L   +Q KG  PD  T   +I  +       K ND L+
Sbjct: 567 LLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM-------KTNDDLV 619

Query: 529 DMEAK 533
           + + K
Sbjct: 620 ENDDK 624



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 253/505 (50%), Gaps = 7/505 (1%)

Query: 71  CMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGL-FPDLFVLNLLINCLCKM 129
           C++   PSP   SF IL  +L  +    TV+     L  N L      V +LL++  C+ 
Sbjct: 104 CILYRLPSPK-PSFHILQPIL--HTTTPTVIFNELSLARNRLNVKTTLVFDLLLSAYCQF 160

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
                A   L  +  +   P T T N L++ L    +I  A  +++++       ++VTF
Sbjct: 161 RKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTF 220

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N +IN LCR      A K F   +  +G   KP+VVTYN++I+G C  G  + A ++   
Sbjct: 221 NIMINILCREGKWKKA-KDFIGHMEVYGV--KPNVVTYNTVINGYCLRGKFEAASKIFKT 277

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           MKD+N+ P+  TYNS I   C     +EA  +  +++++G+ P+ VT+NA+I+  C  G 
Sbjct: 278 MKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGD 337

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +DK     + M+ RG+     TYN L+    L  RI  A ++   M  KG   DV +YNI
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
            IN  C+    + A+ L+ EM+ + IRP+V TY +L+    +   + +A +   K     
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           ++PD   F   IDG C NG +  A Q+ + + N K      T+N L+ G C+  +++ A 
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAK 517

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           KL   ++ +G  PD ++ +T+I    K G M  A ++  +M +    P+ +T+  L++G+
Sbjct: 518 KLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGY 577

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSD 574
            +  +      LL +M ++ +   D
Sbjct: 578 SKIGEADHAEELLREMQSKGITPDD 602



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 208/420 (49%), Gaps = 32/420 (7%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A + ++ M+KM     + +F I++ +L +  ++         +   G+ P++   N +IN
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C  G    A  +   +      P+  T+N  I+ LC E RI EA+ +  KL      P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320

Query: 185 NVVTFNTLINGLCR------------------------TRNTLVALKLFEEMVNEFGAIC 220
           N VT+N LI+G C                         T N L+     E+ + E   + 
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMI 380

Query: 221 K--------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           K        PDVVTYN  I+G C+ G   KA  L  +M ++NI P V TY SLI  F   
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKR 440

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           +   EA+  F + +  G+ PD++ FNA+I+ +C +G +D+  +LL+ M    V PD VT+
Sbjct: 441 NRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTF 500

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N+LM G+C   ++  A++L   M  +G + D  SYN LI+   K   ++DA+ ++ EMLS
Sbjct: 501 NTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLS 560

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
               P+++TYN L+ G  ++G    A +L+ +MQ   + PD  T+   I+ +  N  ++E
Sbjct: 561 LGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 177/354 (50%), Gaps = 1/354 (0%)

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M   NI  +++T+N +I   C    WK+AK     M   GV+P+VVT+N +IN  C  G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           K +  +++ + M  + + PD  TYNS +   C   RI  A  +   ++  G   +  +YN
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI+  C    ++ A     EM++  I  SV TYN L+  LF    + +A  +I +M+  
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V PD  T+   I+G C+ G   +A+ +F  +        +ETY  LI+   K  R+  A
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            + F +   +G +PD++  + +I   C  G +D+A  LL +M+    VP EVTF TL++G
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           + +  K  +   LL +M    +    +S ++ ++   SK    ++ L  F  +L
Sbjct: 507 YCRERKVEEAKKLLDEMKERGIKPDHISYNT-LISGYSKRGDMKDALEVFDEML 559



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 115/216 (53%), Gaps = 3/216 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A+  FD M++    P + ++T L+ +  K  +       FK+    G+ PD+ + N 
Sbjct: 408 AKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNA 467

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+  C  G    AF +L  +  +   P+ VTFN L+ G C E ++ EA +L  ++    
Sbjct: 468 LIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG 527

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ +++NTLI+G  +  +   AL++F+EM++  G    P ++TYN++I G  K G  D
Sbjct: 528 IKPDHISYNTLISGYSKRGDMKDALEVFDEMLS-LG--FDPTLLTYNALIQGYSKIGEAD 584

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
            A+ELL +M+ + I P+  TY  +I      DD  E
Sbjct: 585 HAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 258/519 (49%), Gaps = 39/519 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRL----NSNGLFPDLFVLNLLINCLCKMG-ITS 133
           P   +  +LL  L K+ + D  + L+ ++    +  G   D +  ++++  LC +G I  
Sbjct: 164 PTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEE 223

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
           G  ++  R  + C  P+ V +N +I+G C +G +  A R   +L +    P V T+  LI
Sbjct: 224 GRRLIKHRWGKCC-VPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALI 282

Query: 194 NGLCRTRNTLVALKLFEEMVN------------------EFGAI--------------CK 221
           NG C+        +L  EM                    ++G +              C 
Sbjct: 283 NGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCG 342

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD+ TYN +I+  CK G +++A ELL + K+R + PN  +Y  L+  +C   D+ +A  +
Sbjct: 343 PDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGM 402

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              + + G + D+V++ A I+     G++D    + E M+++GV PD   YN LM G C 
Sbjct: 403 LFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCK 462

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            GRI   + L   M+ +  + DVY +  LI+   ++ ++++A+ +++ ++ + + P ++ 
Sbjct: 463 KGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVG 522

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN ++ G  + G + DAL  +++M      PD +T++T IDG  K   +  A+++F  + 
Sbjct: 523 YNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMM 582

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
             K +  + TY  LING CK   +  A K+F  ++    +P+VVT +T++    K G+ +
Sbjct: 583 KHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPE 642

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           +A  +   M    C+P++ TF  L+ G   N   S V++
Sbjct: 643 RATSIFELMLMNGCLPNDATFHYLINGLT-NTATSPVLI 680



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 254/527 (48%), Gaps = 43/527 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMGITSGAFV 137
           P   +F+ L+   A++   D  + LF  +   +  FP     NLL+N L K G    A  
Sbjct: 128 PTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQ 187

Query: 138 VLGRILRSCFTPNTVTFNF----LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
           +  ++L++      V  N+    ++ GLC  G+I E  RL K      C P+VV +N +I
Sbjct: 188 LYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMII 247

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           +G C+  +   A +   E+  + G +  P V TY ++I+G CK G  +   +LL +M  R
Sbjct: 248 DGYCKKGDLQCATRALNELKMK-GVL--PTVETYGALINGFCKAGEFEAVDQLLTEMAAR 304

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            +N NV  +N++I          EA  +   M + G  PD+ T+N MIN++CK G++++ 
Sbjct: 305 GLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEA 364

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           + LLE   +RG+ P+  +Y  LM  +C  G   +A  +   +   G + D+ SY   I+ 
Sbjct: 365 DELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHG 424

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
                +++ A+ +  +M+ + + P    YN L+SGL + G +     L+ +M   +V PD
Sbjct: 425 VVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPD 484

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR--------- 484
            + FAT IDG  +NG + EA+++F+ I     +  I  YN +I G CK G+         
Sbjct: 485 VYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLN 544

Query: 485 --------------------------LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
                                     + +A K+F ++      P+V+T +++I+  CK+ 
Sbjct: 545 EMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA 604

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            M +A  +   M++ + VP+ VT+ TL+ GF +  K  +   +   M
Sbjct: 605 DMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELM 651



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 133/542 (24%), Positives = 244/542 (45%), Gaps = 40/542 (7%)

Query: 51  LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           ++  +K G +T  EA      M +M   P +T++ I++    K  + +    L ++    
Sbjct: 317 IDAEYKYGLVT--EAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKER 374

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           GL P+ F    L++  CK G    A  +L RI       + V++   I+G+   G I  A
Sbjct: 375 GLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVA 434

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK-LFEEMVNEFGAICKPDVVTYNS 229
             + +K+      P+   +N L++GLC+ +  + A+K L  EM++      +PDV  + +
Sbjct: 435 LMVREKMMEKGVFPDAQIYNILMSGLCK-KGRIPAMKLLLSEMLDRN---VQPDVYVFAT 490

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +IDG  ++G +D+A ++   +  + ++P ++ YN++I GFC      +A     EM    
Sbjct: 491 LIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVH 550

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             PD  T++ +I+   K   M    ++   M++    P+ +TY SL++GFC    + RA 
Sbjct: 551 HAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAE 610

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           ++F  M S     +V +Y  L+    K  K E A  ++  ML     P+  T++ L++GL
Sbjct: 611 KVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGL 670

Query: 410 FQVGNLGDALKLID-KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
                    ++  D K     ++ D FT    +DG                      +  
Sbjct: 671 TNTATSPVLIEEKDSKENERSLILDFFTM-MLLDGW---------------------DQV 708

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           I  YN +I  LCK G + TA  L  ++  KG + D V  + ++H LC +G+  +  +++ 
Sbjct: 709 IAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIIS 768

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
               K  + + V +   L  ++   + S+  V+L  +  +          SK  D + KD
Sbjct: 769 CDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLVED----------SKFSDQVEKD 818

Query: 589 KK 590
            K
Sbjct: 819 LK 820



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 92/186 (49%), Gaps = 5/186 (2%)

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTFATYIDGLCKNG 448
           M ++ ++P+   ++ L+    + G+L  AL+L   + ++++  P        ++GL K+G
Sbjct: 121 MKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSG 180

Query: 449 FVLEAVQVF----QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            V  A+Q++    Q        +   T + ++ GLC +G+++   +L      K  +P V
Sbjct: 181 KVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHV 240

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           V  + +I   CK+G +  A   L +++ K  +P+  T+  L+ GF +  +   V  LL +
Sbjct: 241 VFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTE 300

Query: 565 MAAEKL 570
           MAA  L
Sbjct: 301 MAARGL 306


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 241/476 (50%), Gaps = 5/476 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G++ ++  +  F  M +M  SP + ++  L+    K    + V SLF  +   G  PD
Sbjct: 242 KEGDLENSRRL--FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPD 299

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N LINC CK      AF     +  +   PN VT++ LI+  C EG +  A +L  
Sbjct: 300 IITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLX 359

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      PN  T+ +LI+  C+  N   A KL  +M+    A  K ++VTY +++DGLC
Sbjct: 360 DMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ---AGVKLNIVTYTALLDGLC 416

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G + +A+E+   M    I+PN   Y +L+ G+   +  ++A  +  +M +  ++PD++
Sbjct: 417 KAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLI 476

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            + ++I  +C   K+++   +LE M  RG++ + V   +++D +   G+ S A   F  M
Sbjct: 477 LYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEM 536

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              G    + +Y +LI+  C+   VE AV  +  MLS  ++P+V  Y +L+ GL     +
Sbjct: 537 QDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCI 596

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             A KL D+MQ   + PD   F   IDG  K+G + EA+ +   +     E  +  Y  L
Sbjct: 597 ESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSL 656

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           ++G  + G L  A K F+ +  KG +P+ V C  ++    K GQ+D+A +L  +ME
Sbjct: 657 VSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 712



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 257/508 (50%), Gaps = 4/508 (0%)

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
           G   F +L ++  +    +     F R+ +    P     N L++ L K G         
Sbjct: 159 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 218

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             ++ +   P+  T+N +I+ LC EG +  + RLF ++      P+VVT+N+LI+G  + 
Sbjct: 219 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 278

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
            +      LF EM  + G  C PD++TYN +I+  CK   + +A E   +MK+  + PNV
Sbjct: 279 GSLEEVASLFNEM-KDVG--CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TY++LI  FC     + A  L  +M   G+ P+  T+ ++I+ NCK G + +  +LL  
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M+Q GV  + VTY +L+DG C  GR+  A E+F SM+  G   +   Y  L++   K ++
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +EDA+ + ++M    I+P +I Y +++ G      L +   ++++M+   +  +     T
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 515

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            ID   K G   +A+  FQ +++   E  I TY  LI+GLC+ G ++ A   F R+   G
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG 575

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P+V   +++I  LC    ++ A  L  +M+ +   P    F  L+ G +++    + +
Sbjct: 576 LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 635

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           VL+ +M  E  +  DL + + +V   S+
Sbjct: 636 VLISRM-TELAIEFDLHVYTSLVSGFSQ 662



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 246/538 (45%), Gaps = 38/538 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F  M   +  P   S   LL  L+K+     V   F  +   G+ P +F  N++
Sbjct: 177 EEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVM 236

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G    +  +  ++     +P+ VT+N LI+G    G + E A LF ++    C
Sbjct: 237 IDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGC 296

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+++T+N LIN  C+      A + F EM N      KP+VVTY+++ID  CK+G +  
Sbjct: 297 VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG---LKPNVVTYSTLIDAFCKEGMMQG 353

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL  M+   + PN  TY SLI   C   +  EA  L  +M+  GV+ ++VT+ A+++
Sbjct: 354 AIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD 413

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+M +   +   M++ G++P+   Y +L+ G+    R+  A ++   M     + 
Sbjct: 414 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 473

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  Y  +I  +C  +K+E+   +  EM S  I  + +   T++   F+ G   DAL   
Sbjct: 474 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFF 533

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC-- 480
            +MQ   V     T+   IDGLC+ G V  AV  F  + +   +  +  Y  LI+GLC  
Sbjct: 534 QEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXN 593

Query: 481 ---------------------------------KMGRLKTACKLFHRLQHKGPIPDVVTC 507
                                            K G L+ A  L  R+       D+   
Sbjct: 594 NCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 653

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           ++++    + G++ +A     +M  K  +P EV    LLR + +  +  + + L ++M
Sbjct: 654 TSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 14/207 (6%)

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G RH   SY I+++   + +   DA    +E          +  N+ +   F V N+ D 
Sbjct: 99  GFRHTTESYCIIVHLVFRARMYTDAHDTVKE----------VIMNSRMDMGFPVCNIFDM 148

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           L        N  V  S  F        + G + EA + F  +RN +   +  + N L++ 
Sbjct: 149 LW----STRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 204

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L K G  +   K F+ +   G  P V T + MI +LCKEG ++ +  L + M      P 
Sbjct: 205 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 264

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            VT+ +L+ G+ +     +V  L ++M
Sbjct: 265 VVTYNSLIDGYGKVGSLEEVASLFNEM 291


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 250/500 (50%), Gaps = 3/500 (0%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P+P   S+ +++  L K       V LF  +    + P+    N +I+   K G     F
Sbjct: 184 PAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGF 243

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  ++LR    PN +T+N L++GLC  GR+ E A +  ++      P+  T++ L +G 
Sbjct: 244 RLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGH 303

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
            RT ++   L LFEE V +     K    T + +++GLCKDG + KA+E+L  + +  + 
Sbjct: 304 SRTGDSQTMLSLFEESVKKG---VKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLL 360

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
              + YN+LI G+C + D + A  +F +M    ++PD +T+NA+IN   K  ++ + + L
Sbjct: 361 QTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDL 420

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           +  M + GVNP   T+N+L+D +   G++ +   +   M  KG + +V SY  ++NA CK
Sbjct: 421 VIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCK 480

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           + K+ +AV +  +M  + + P    YN ++    + G+   A  L +KM+ + V P   T
Sbjct: 481 NGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVT 540

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   I GLCK   + EA ++  ++RN      + +YN LI+  C       A +L   + 
Sbjct: 541 YNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMW 600

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G  P   T   +   L   G++ +  +L   M  K+ VP    +  ++  + +  ++S
Sbjct: 601 KCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEES 660

Query: 557 KVVVLLHKMAAEKLVVSDLS 576
           KV  L  +M+ + + V D +
Sbjct: 661 KVEALRKEMSDKGIAVGDYT 680



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 226/452 (50%), Gaps = 4/452 (0%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI-LRSCFTPNTVTF 154
           ++  V   F+ L +    PD F  N  +      G    A  +L R+       PN  ++
Sbjct: 132 RHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSY 191

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N +I GL   G   +A +LF ++   A  PN +T+NT+I+G  +  +     +L+ +M+ 
Sbjct: 192 NVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLR 251

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                 KP+V+TYN ++ GLC+ G + +   +L +M  R + P+  TY+ L  G     D
Sbjct: 252 HG---LKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGD 308

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
            +    LF E +  GV+    T + ++N  CKDGK+ K   +L+ ++  G+   TV YN+
Sbjct: 309 SQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNT 368

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++G+C +G +  A  +F  M S+  R D  +YN LIN   K +++ +A  L  EM    
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG 428

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           + PSV T+NTL+    + G L     ++  MQ   + P+  ++ + ++  CKNG +LEAV
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAV 488

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +   +         + YN +I+   + G    A  L  +++  G  P +VT + +I  L
Sbjct: 489 AILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGL 548

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           CK+ Q+ +A +LL  +      P  +++ TL+
Sbjct: 549 CKQSQISEAEELLDSLRNYGLAPDVISYNTLI 580



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 179/357 (50%), Gaps = 5/357 (1%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM-DNGVQPDVVTFN 298
           V  A ELL+  + R   P+  T+N  +       D  EA  +   M  D    P+  ++N
Sbjct: 136 VRGAFELLVAARAR---PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYN 192

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I    K G      +L + M ++ V P+ +TYN+++DG    G +     L+  M+  
Sbjct: 193 VVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRH 252

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G + +V +YN+L++  C+  ++ +   +  EM S ++ P   TY+ L  G  + G+    
Sbjct: 253 GLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTM 312

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           L L ++     V   ++T +  ++GLCK+G + +A +V Q + N         YN LING
Sbjct: 313 LSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLING 372

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            C++G L+ A  +F +++ +   PD +T + +I+ L K  ++ +A+DL+++ME     PS
Sbjct: 373 YCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPS 432

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
             TF TL+  + +  +  K  ++L  M  + L  + +S  S +V+   K+ K  E +
Sbjct: 433 VETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGS-IVNAFCKNGKILEAV 488


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 258/507 (50%), Gaps = 8/507 (1%)

Query: 95  KQYDTVVSLFKRLNSN--GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           K  D    LF+ L+S   G    +   N L++   +      A  +L   L + F P+  
Sbjct: 36  KDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVE 95

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNV-FACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           T+N LI G C      EA  + +++   +   P++ T N +++GLC++   L A+  FE 
Sbjct: 96  TWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFET 155

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
                   C  D+ TY +I+D L K+  +  A  L+ ++      P + TYN+L+ G C 
Sbjct: 156 TTTNG---CTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCK 212

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
           +   +EA  L  +++DNG  PDVVT+ ++I+   K+ +  +  +L + M  RG+  DTV 
Sbjct: 213 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVC 272

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y +L+ G    G+I +A  ++ +M S+GC  DV + + +I+  CK  ++  AV +++ M 
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 332

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
           +  + P+ + Y+ L+ GL +   +  AL+++ +M+     PD+ T+   IDGLCK+G V 
Sbjct: 333 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 392

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
            A   F  +    C+  + TYN L++G CK G    AC +F  +      P+VVT  T+I
Sbjct: 393 AARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLI 452

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             LCK  Q+ KA+     M+ + C P    + +L+ G  ++ K     +L  +M  E+  
Sbjct: 453 SGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM--ERSG 510

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQF 598
           V++    ++++  L K  +  E ++ F
Sbjct: 511 VANSQTRTRLIFHLCKANRVDEAVSLF 537



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 238/504 (47%), Gaps = 41/504 (8%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS- 145
           LL + A+ K++    +L K   +    PD+   N+LI   C       AF V+  +    
Sbjct: 65  LLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDY 124

Query: 146 CFTPNTVTFNFLINGLCAEGRIM-----------------------------------EA 170
              P+  T N +++GLC  G+++                                   +A
Sbjct: 125 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L +K+    C P + T+N L+NGLC+      A+ L  ++V+     C PDVVTY S+
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG---CTPDVVTYTSL 241

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           IDGL K+    +A +L  +M  R +  + + Y +LI G        +A  ++  M   G 
Sbjct: 242 IDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGC 301

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PDVVT + MI+  CK G++    R+ + M  RG+ P+ V Y++L+ G C   ++  A E
Sbjct: 302 VPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 361

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +   M    C  D  +YNILI+  CK   VE A   + EML    +P V TYN L+SG  
Sbjct: 362 MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFC 421

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + GN   A  + D M  +   P+  T+ T I GLCK   + +A   FQ ++   C     
Sbjct: 422 KAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSF 481

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            Y+ L++GLCK G+L+  C LF  ++  G + +  T + +I  LCK  ++D+A  L   +
Sbjct: 482 VYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAI 540

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNK 554
             K  +P    + +++   +++ K
Sbjct: 541 R-KEGMPHPYAYNSIISTLIKSAK 563



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/444 (31%), Positives = 230/444 (51%), Gaps = 5/444 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + +  ++L  L K+ +    +  F+   +NG   D+     +++ L K      A  
Sbjct: 127 APSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVA 186

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           ++ +I  +  TP   T+N L+NGLC  GR+ EA  L +K+    C P+VVT+ +LI+GL 
Sbjct: 187 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 246

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + + +  A KLF+EM      +   D V Y ++I GL + G + +A  +   M  +   P
Sbjct: 247 KEKRSFEAYKLFKEMALRGLVL---DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP 303

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +V+T +++I G C       A  +F  M   G+ P+ V ++A+I+  CK  KMD    +L
Sbjct: 304 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 363

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M +    PDT+TYN L+DG C  G +  AR  F  M+  GC+ DVY+YNIL++  CK 
Sbjct: 364 AQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKA 423

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
              + A  ++ +M S    P+V+TY TL+SGL +   L  A      M+     PDSF +
Sbjct: 424 GNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVY 483

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           ++ +DGLCK+G +     +F  +         +T   LI  LCK  R+  A  LF+ ++ 
Sbjct: 484 SSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRK 542

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMD 521
           +G +P     +++I  L K  +++
Sbjct: 543 EG-MPHPYAYNSIISTLIKSAKVN 565



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 144/281 (51%), Gaps = 7/281 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           ++G I    +VY    M      P + + + ++  L K  +    V +FK + + GL P+
Sbjct: 282 QAGKIPQASSVY--KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 339

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             V + LI+ LCK      A  +L ++ ++  TP+T+T+N LI+GLC  G +  A   F 
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 399

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++    C P+V T+N L++G C+  NT  A  +F++M +     C P+VVTY ++I GLC
Sbjct: 400 EMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSH---CSPNVVTYGTLISGLC 456

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   + KA      MK+R   P+   Y+SL+ G C     +    LF EM  +GV  +  
Sbjct: 457 KRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQ 515

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           T   +I + CK  ++D+   L   + + G+ P    YNS++
Sbjct: 516 TRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSII 555


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 154/587 (26%), Positives = 268/587 (45%), Gaps = 76/587 (12%)

Query: 42  KDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVV 101
           + G   AK      +       +A   FD ++K      +      L+ +A+       +
Sbjct: 23  QGGRGGAKRTKQGGRQRATEPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASPA-VAI 81

Query: 102 SLFKRLNSNGL---FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLI 158
           SLF R+   G     P++    ++I C  ++G    AF  +GR++ +    + + F+ L+
Sbjct: 82  SLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLL 141

Query: 159 NGLCAEGRIMEAARL-FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
            GLC   R  +A  +  +++    C P++ ++  L+ GLC  + +  AL L   M +  G
Sbjct: 142 KGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKG 201

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC---------- 267
             C  DVV Y ++I+GL ++G +DKA  L   M DR  +P+V+TY+S+I           
Sbjct: 202 R-CPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDK 260

Query: 268 -------------------------GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
                                    G+C     KEA  +F +M  +GV+PDVVT+ A+++
Sbjct: 261 ATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMD 320

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           Y CK+GK  +  ++ + +++RG  PD+ TY +L+ G+   G +    +L   M+ KG + 
Sbjct: 321 YLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQL 380

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
             + +N+++ A  K  KV++A+ ++  M  + + P ++ Y T+L  L   G + DAL   
Sbjct: 381 GHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQF 440

Query: 423 DKMQLNDVVPDSFTFATYIDGLC-----------------------------------KN 447
           + ++   + P+   F T I GLC                                   K 
Sbjct: 441 NSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKK 500

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G V+EA  +F  +     E    TYN LI+G C  G++  A KL   +   G  P  VT 
Sbjct: 501 GRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTY 560

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +T+I+   + G+++    LL +M+ K   P  VT+  LL+G  Q  +
Sbjct: 561 NTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGR 607



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 203/402 (50%), Gaps = 34/402 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   FD M+   PSP + +++ +++ L+K +  D    +F R+  NG+ PD  +   L
Sbjct: 224 DKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL 283

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C  G    A  +  ++ R    P+ VT+  L++ LC  G+  EA ++F  L     
Sbjct: 284 VHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH 343

Query: 183 DPNVVTFNTLINGLCRTRNTLVALK-LFEEMVNE------------FGAICK-------- 221
            P+  T+ TL++G   T   LV +  L + M+ +             GA  K        
Sbjct: 344 KPDSTTYGTLLHGYA-TEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEAL 402

Query: 222 ------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                       PD+V Y +++D LC  G VD A      +K   + PN++ + +LI G 
Sbjct: 403 LVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGL 462

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C  D W + + L  EM+D G+  D + FNA++   CK G++ +   L +LM++ G+ P+T
Sbjct: 463 CTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNT 522

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN+L+DG+CL G++  A +L   MV  G +    +YN +IN   ++ ++ED + L RE
Sbjct: 523 NTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLRE 582

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           M  + + P ++TY  LL GLFQ G    A +L  +M   D V
Sbjct: 583 MDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWDTV 624



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 212/437 (48%), Gaps = 5/437 (1%)

Query: 61  TSNEAVYFFDCMIKMKPS-P-GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           TS +A+     M   K   P  + ++T ++  L +  Q D   SLF  +   G  PD+  
Sbjct: 185 TSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVT 244

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            + +I+ L K      A  V  R++++   P+ + +  L++G C+ G+  EA  +FKK+ 
Sbjct: 245 YSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMC 304

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +P+VVT+  L++ LC+   +  A K+F+ +V       KPD  TY +++ G   +G
Sbjct: 305 RHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRG---HKPDSTTYGTLLHGYATEG 361

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            + +  +LL  M  + +      +N ++  +   +   EA  +F  M   G+ PD+V + 
Sbjct: 362 ALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYG 421

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +++  C  G++D        +   G+ P+ V + +L+ G C   +  +  EL   M+ +
Sbjct: 422 TVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDR 481

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   D   +N ++   CK  +V +A  L+  M+   I P+  TYNTL+ G    G + +A
Sbjct: 482 GICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEA 541

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           +KL+  M  N V P   T+ T I+G  +NG + + + + + +        I TY  L+ G
Sbjct: 542 MKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQG 601

Query: 479 LCKMGRLKTACKLFHRL 495
           L + GR   A +L+ R+
Sbjct: 602 LFQAGRTVAAKELYLRM 618



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/435 (24%), Positives = 192/435 (44%), Gaps = 39/435 (8%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A ++F +L       ++   N  ++ + R  +  VA+ LF  M         P++ TY 
Sbjct: 45  DAHQVFDRLLKRGDRASIFDLNRALSDVARA-SPAVAISLFNRMPRAGATSAAPNIATYG 103

Query: 229 SIID-----------------------------------GLCKDGFVDKAKELLL-QMKD 252
            +I                                    GLC       A +++L +M +
Sbjct: 104 IVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPE 163

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQP-DVVTFNAMINYNCKDGKM 310
               P++ +Y  L+ G C     ++A  L   M D+ G  P DVV +  +IN   ++G++
Sbjct: 164 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQL 223

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           DK   L + M+ RG +PD VTY+S++        + +A ++F  MV  G   D   Y  L
Sbjct: 224 DKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL 283

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           ++  C   K ++A+ ++++M    + P V+TY  L+  L + G   +A K+ D +     
Sbjct: 284 VHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH 343

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PDS T+ T + G    G ++E   +   +     +L    +N ++    K  ++  A  
Sbjct: 344 KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALL 403

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           +F  ++ +G  PD+V   T++  LC  G++D A      ++++   P+ V F TL+ G  
Sbjct: 404 VFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLC 463

Query: 551 QNNKKSKVVVLLHKM 565
             +K  KV  L  +M
Sbjct: 464 TCDKWDKVEELAFEM 478


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 257/526 (48%), Gaps = 40/526 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + AV  FD + + + +P   +++ L+  LAK  + D  + L   +  +G+ PD+   N L
Sbjct: 175 DRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNAL 234

Query: 123 INCLCKMGITSGAFVVLGRILRSCFT-PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +    K G       V  ++++     PN  T+N +++GLC  GR  E   +++++    
Sbjct: 235 LGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN 294

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK----- 236
             P+V+T+  LI+GLCR+ +   A +++ E++     I   D   YNS++ G C+     
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI---DAAMYNSLVKGFCQAGRVQ 351

Query: 237 -----------------------------DGFVDKAKELL-LQMKDRNINPNVITYNSLI 266
                                         G VD+A EL  L  KD    P+ +T+ +LI
Sbjct: 352 EAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLI 411

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C      +A  +F E   +G Q DV ++++MIN  C  G++    ++ E M + G  
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P++  YN+L+ GFC V R S A  ++  M   GC   V +YN LI+  CK +K ++A  +
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSV 531

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            REM+     P + TY +L+ GLF    + DAL +  ++    +  D       I GLC 
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCS 591

Query: 447 NGFVLEAVQVFQAIRNCK-CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
            G V EA+ VF  ++  K C   + TYN L++GL + G +  A  L+  +   G  PD++
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           + +T I  LC   ++ +   LL ++ ++  +P+ +T+  L+R  ++
Sbjct: 652 SYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 270/553 (48%), Gaps = 44/553 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF-----PDLFVLNLLINCLCKMGIT 132
           +PG+ S   LL    + +++    + F  L S+G F     P+L   N+++  LC  G  
Sbjct: 116 NPGIRSHNALLDAFVRARRFSDADAFFASL-SHGAFGRRIAPNLQTYNIVLRSLCARGDL 174

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
             A  +   + R    P+ +T++ L+ GL  + R+  A  L  ++      P+VV +N L
Sbjct: 175 DRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNAL 234

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           + G  +       +++++++V + GA  +P++ TYN ++DGLCK G   +  E+  +M  
Sbjct: 235 LGGCFKAGEFEKVMRVWDKLVKDPGA--RPNLATYNVMLDGLCKFGRFKEVGEVWERMVA 292

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
            N+ P+VITY  LI G C   D   A  ++ E++  G+  D   +N+++   C+ G++ +
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQE 352

Query: 313 -------------------------------VNRLLEL--MIQRGVN--PDTVTYNSLMD 337
                                          V+  +EL  ++++ V   PDTVT+ +L+ 
Sbjct: 353 AWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIH 412

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C  G  ++A  +F      G + DV+SY+ +IN  C   ++ DAV +Y +M  +  +P
Sbjct: 413 GLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKP 472

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +   YN L+SG  QV    DA+++  KM  N   P   T+ T IDGLCK     EA  V 
Sbjct: 473 NSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVA 532

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +        I TY  LI GL    ++  A  ++ ++ +KG   DV+  + +IH LC  
Sbjct: 533 REMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSA 592

Query: 518 GQMDKANDLLLDM-EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           G++D+A  +  DM E KNC P+ VT+ TL+ G  +     K   L   +  + L    +S
Sbjct: 593 GKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIIS 652

Query: 577 LSSKVVDLLSKDK 589
            ++++  L S D+
Sbjct: 653 YNTRIKGLCSCDR 665



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/534 (27%), Positives = 270/534 (50%), Gaps = 14/534 (2%)

Query: 73  IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGI 131
           ++ +P    ++  ++L+  ++    D  +  F+ L S  G  P +   N L++   +   
Sbjct: 75  LRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARR 134

Query: 132 TSGAFVVLGRILRSCF----TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
            S A      +    F     PN  T+N ++  LCA G +  A  LF  L      P+ +
Sbjct: 135 FSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCI 194

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T++TL+ GL +      AL L +EM     +  +PDVV YN+++ G  K G  +K   + 
Sbjct: 195 TYSTLMCGLAKQDRLDHALDLLDEMPR---SGVQPDVVCYNALLGGCFKAGEFEKVMRVW 251

Query: 248 LQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
            ++ KD    PN+ TYN ++ G C    +KE   ++  M+ N +QPDV+T+  +I+  C+
Sbjct: 252 DKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCR 311

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G +D   R+   +I+ G+  D   YNSL+ GFC  GR+  A + + S    G R ++ +
Sbjct: 312 SGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRT 370

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIR--PSVITYNTLLSGLFQVGNLGDALKLIDK 424
           YNI+I        V++A+ L+ ++L + +   P  +T+ TL+ GL Q G    A  + ++
Sbjct: 371 YNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
            +++    D F++++ I+GLC  G +++AV+V++ +    C+     YN LI+G C++ R
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
              A +++ ++   G  P V+T +T+I  LCK  +  +A+ +  +M      P   T+ +
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           L+RG   + K    + +  ++  + L V D+ + + ++  L    K  E L+ F
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKV-DVMMHNILIHGLCSAGKVDEALHVF 602



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 234/443 (52%), Gaps = 4/443 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++ ++L  L K  ++  V  +++R+ +N L PD+    +LI+ LC+ G   GA  V
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              I+++    +   +N L+ G C  GR+ EA + +     FA   N+ T+N +I GL  
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAG-FAGLRNLRTYNIMIKGLFD 380

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           +     A++L++ +  E    C PD VT+ ++I GLC++GF +KA  +  + +      +
Sbjct: 381 SGMVDEAIELWDLL--EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLD 438

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V +Y+S+I G C V    +A  ++ +M  +G +P+   +NA+I+  C+  +     R+  
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M   G +P  +TYN+L+DG C   +   A  +   MV  G   D+ +Y  LI     D+
Sbjct: 499 KMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK 558

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTF 437
           K++DA+ +++++L + ++  V+ +N L+ GL   G + +AL +   M +  +  P+  T+
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTY 618

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T +DGL + G++ +A  ++ +I     E  I +YN  I GLC   R+    +L   +  
Sbjct: 619 NTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS 678

Query: 498 KGPIPDVVTCSTMIHWLCKEGQM 520
           +G IP V+T + ++  + K G +
Sbjct: 679 RGIIPTVITWNILVRAVIKYGPI 701



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 128/247 (51%), Gaps = 2/247 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  ++ M K    P    +  L++   +  +    V ++ ++  NG  P +   N LI
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK      A  V   ++ + FTP+  T+  LI GL ++ +I +A  ++K++      
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            +V+  N LI+GLC       AL +F +M  +    C P++VTYN+++DGL + G++DKA
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKN--CPPNLVTYNTLMDGLYETGYIDKA 634

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L   + +  + P++I+YN+ I G C  D   E   L  E++  G+ P V+T+N ++  
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694

Query: 304 NCKDGKM 310
             K G +
Sbjct: 695 VIKYGPI 701



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 4/206 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++AV  +  M     SP + ++  L+  L K ++Y    S+ + +  NG  PD+     
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI  L        A  +  +IL      + +  N LI+GLC+ G++ EA  +F  +    
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKK 609

Query: 182 -CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            C PN+VT+NTL++GL  T     A  L+  +  +     +PD+++YN+ I GLC    +
Sbjct: 610 NCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG---LEPDIISYNTRIKGLCSCDRI 666

Query: 241 DKAKELLLQMKDRNINPNVITYNSLI 266
            +  +LL ++  R I P VIT+N L+
Sbjct: 667 HEGIQLLDEVLSRGIIPTVITWNILV 692



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 1/106 (0%)

Query: 63  NEAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +EA++ F  M + K   P + ++  L+  L +    D   +L+  +  +GL PD+   N 
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
            I  LC          +L  +L     P  +T+N L+  +   G I
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 248/494 (50%), Gaps = 8/494 (1%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L+  L   GL PD    N +I   CK G  + A      +  S    +T T N L+ G C
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYC 225

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
               + +A  L   + +  C  N  ++  LI GLC  R    AL L   MV++    C  
Sbjct: 226 RTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDG---CSL 282

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           ++ TY  +I GLCK+G +  A+ LL +M  R + P+V TYN++I G+C     K+A  + 
Sbjct: 283 NLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 342

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M  NG  PD  T+N++I Y    GK+D+   LL   I RG  P  +T+ +L++G+C  
Sbjct: 343 ALMEQNGCNPDDWTYNSLI-YGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKA 401

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            RI  A  +  +M+S  C+ D+ +Y +LIN   K  ++++A     EM +  + P+V+TY
Sbjct: 402 ERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTY 461

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            +++ G  +VG +G AL++   M+     P+++T+ + I GL ++  + +A+ +   ++ 
Sbjct: 462 TSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQE 521

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 + TY  LI G CK      A +LF  ++  G  PD    + +   LCK G+ ++
Sbjct: 522 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEE 581

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A   L+    K  V ++VT+ +L+ GF +        VL+ KM  E    +DL   S ++
Sbjct: 582 AYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG-CKADLYTYSVLL 637

Query: 583 DLLSKDKKYRECLN 596
             L K KK  E L+
Sbjct: 638 QALCKQKKLNEALS 651



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 162/599 (27%), Positives = 253/599 (42%), Gaps = 116/599 (19%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+     M+    S  + ++T+L+  L K  +      L   +   G+ P ++  N +I
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G    A  +   + ++   P+  T+N LI GLC  G++ EA  L          
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFT 385

Query: 184 PNVVTFNTLINGLC---------RTRNTLVA----------------------LKLFEEM 212
           P V+TF  LING C         R ++ +++                      LK  +E 
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 213 VNE-FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           +NE F     P+VVTY SIIDG CK G V  A E+   M+    +PN  TY SLI G   
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT-- 329
                +A  L  +M ++G+ P V+T+  +I   CK  + D   RL E+M Q G+ PD   
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 565

Query: 330 ------------------------------VTYNSLMDGFCLVGRISRARELFVSMVSKG 359
                                         VTY SL+DGF   G    A  L   MV++G
Sbjct: 566 YNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 625

Query: 360 CRHDVYSYNILINANCKDQKVEDAVC---------------------------------- 385
           C+ D+Y+Y++L+ A CK +K+ +A+                                   
Sbjct: 626 CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAK 685

Query: 386 -LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ EM+S   +PS  TY   +S   ++G + +A  LI +M+ + V PD  T+  +I+G 
Sbjct: 686 SLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGC 745

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG----------------RLKTA 488
              G++  A    + + +  CE    TY  L+    KM                  L   
Sbjct: 746 GHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMV 805

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
            +L  R+   G  P VVT S++I   CK  ++++A  LL  M  K+  P+E  +  L++
Sbjct: 806 WQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIK 864



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 228/449 (50%), Gaps = 7/449 (1%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           +   +LI  LC+      A V++  ++    + N  T+  LI GLC EGRI +A  L  +
Sbjct: 250 YSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDE 309

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           + +    P+V T+N +I+G C++     AL + + ++ + G  C PD  TYNS+I GLC 
Sbjct: 310 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMEQNG--CNPDDWTYNSLIYGLC- 365

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G +D+A+ELL     R   P VIT+ +LI G+C  +   +A  +   M+ +  + D+  
Sbjct: 366 GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQA 425

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +IN   K  ++ +    L  M   G+ P+ VTY S++DG+C VG +  A E+F  M 
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLME 485

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +GC  + ++Y  LI    +D+K+  A+ L  +M  + I P VITY TL+ G  +     
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 545

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +L + M+ N + PD   +    D LCK+G   EA      +R      ++ TY  L+
Sbjct: 546 NAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--VRKGVVLTKV-TYTSLV 602

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G  K G    A  L  ++ ++G   D+ T S ++  LCK+ ++++A  +L  M      
Sbjct: 603 DGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVK 662

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            + V +  ++   ++  K      L ++M
Sbjct: 663 CNIVAYTIIISEMIKEGKHDHAKSLFNEM 691



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 203/411 (49%), Gaps = 8/411 (1%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N  +  L R   T    KL+  +V E G +  PD VTYN++I   CK G +  A     
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQE-GLL--PDTVTYNTMIMAYCKKGSLAIAHRYFC 203

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            +++  +  +  T N+L+ G+C   D ++A  L + M   G + +  ++  +I   C+  
Sbjct: 204 LLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEAR 263

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            + +   L+ +M+  G + +  TY  L+ G C  GRI  AR L   M  +G    V++YN
Sbjct: 264 CVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYN 323

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            +I+  CK  +++DA+ +   M      P   TYN+L+ GL   G L +A +L++     
Sbjct: 324 AMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIAR 382

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
              P   TF   I+G CK   + +A++V   + +  C+L ++ Y  LIN L K  RLK A
Sbjct: 383 GFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEA 442

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +  + +   G  P+VVT +++I   CK G +  A ++   ME + C P+  T+ +L+ G
Sbjct: 443 KETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYG 502

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
            +Q+ K  K + L+ KM  + +    ++ ++    L+    K  E  N FR
Sbjct: 503 LIQDKKLHKAMALITKMQEDGITPGVITYTT----LIQGQCKKHEFDNAFR 549



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 195/453 (43%), Gaps = 57/453 (12%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +PG+ ++T L+    K  ++D    LF+ +  NGL PD    N+L + LCK G    A+ 
Sbjct: 525 TPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYS 584

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            L   +R       VT+  L++G    G    AA L +K+    C  ++ T++ L+  LC
Sbjct: 585 FL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALC 641

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + +    AL + ++M    G  C  ++V Y  II  + K+G  D AK L  +M      P
Sbjct: 642 KQKKLNEALSILDQMTVS-GVKC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK----- 312
           +  TY   I  +C +   +EA+ L  EM  +GV PDVVT+N  IN     G +D+     
Sbjct: 699 SATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTL 758

Query: 313 ----------------------------------------------VNRLLELMIQRGVN 326
                                                         V +LLE M++ G+N
Sbjct: 759 KRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLN 818

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P  VTY+S++ GFC   R+  A  L   M+ K    +   Y +LI   C  +    AV  
Sbjct: 819 PTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSF 878

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             +M+    +P + +Y+ L+ GL   G+   A  L   +   D   +   +    DGL K
Sbjct: 879 VTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLK 938

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            G V    Q+  A+ N  C +  E+Y+ L + +
Sbjct: 939 AGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 19/327 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+   D M        + ++TI+++ + K  ++D   SLF  + S+G  P      + 
Sbjct: 647 NEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVF 706

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK+G    A  ++G + R   TP+ VT+N  ING    G I  A    K++   +C
Sbjct: 707 ISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASC 766

Query: 183 DPNVVTFNTLI----------------NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           +PN  T+  L+                +G+       +  +L E M+        P VVT
Sbjct: 767 EPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHG---LNPTVVT 823

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+SII G CK   +++A  LL  M  ++I+PN   Y  LI   C +  + +A     +M+
Sbjct: 824 YSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMI 883

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           + G QP + +++ +I   C +G  D+   L   ++    N + V +  L DG    G + 
Sbjct: 884 EFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVD 943

Query: 347 RARELFVSMVSKGCRHDVYSYNILINA 373
              +L  +M ++ CR D  SY++L ++
Sbjct: 944 FCSQLLAAMDNRHCRIDSESYSMLTDS 970



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 152/342 (44%), Gaps = 21/342 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN  ++ A    + M+       + ++++LL  L K K+ +  +S+  ++  +G+  +
Sbjct: 607 KAGN--TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +    ++I+ + K G    A  +   ++ S   P+  T+   I+  C  GRI EA  L  
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIG 724

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID--- 232
           ++      P+VVT+N  ING         A    + MV+   A C+P+  TY  ++    
Sbjct: 725 EMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVD---ASCEPNCWTYWLLLKHFL 781

Query: 233 --GLCKDGFVDKAK-----------ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
              L    +VD +            +LL +M    +NP V+TY+S+I GFC     +EA 
Sbjct: 782 KMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEAC 841

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L   M+   + P+   +  +I   C      K    +  MI+ G  P   +Y+ L+ G 
Sbjct: 842 VLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGL 901

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           C  G   RA+ LF  ++     H+  ++ IL +   K   V+
Sbjct: 902 CDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVD 943



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 12/202 (5%)

Query: 33  KTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLA 92
           K  L + H+ D + +  +         I  N      + M+K   +P + +++ ++    
Sbjct: 782 KMSLINAHYVDTSGMWNW---------IELNMVWQLLERMMKHGLNPTVVTYSSIIAGFC 832

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           K  + +    L   +    + P+  +  +LI C C + +   A   +  ++   F P   
Sbjct: 833 KATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLE 892

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           ++++LI GLC EG    A  LF  L     + N V +  L +GL +  +     +L   M
Sbjct: 893 SYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAM 952

Query: 213 VNEFGAICKPDVVTYNSIIDGL 234
            N     C+ D  +Y+ + D +
Sbjct: 953 DNRH---CRIDSESYSMLTDSI 971



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 3/119 (2%)

Query: 450 VLEAVQVFQAIRNC---KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           V EAV   QAIR     +  L  + YN  +  L +    +   KL+  L  +G +PD VT
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVT 181

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +TMI   CK+G +  A+     +          T   LL G+ + +   K   LL  M
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMM 240


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 258/510 (50%), Gaps = 8/510 (1%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           +S +A+  F  M   +  P +  +  +L  L    ++  +  ++  +  +G+ P++F  N
Sbjct: 126 SSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYN 185

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +L+  LCK     GA  +L  +      P+ V++  LI+ LC  G++ EA  L       
Sbjct: 186 ILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AM 240

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
           +  P+V  +N LING+C+      A +L +EM+N+      P+V++Y +II+ L   G V
Sbjct: 241 SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG---IDPNVISYTTIINALSDAGNV 297

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           + +  +L +M  R  +PN+ T+ SLI GF       EA   +  M+  GV P+VV +NA+
Sbjct: 298 ELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNAL 357

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  C    +     +   M   G  P+  TY++L+DG+   G +  A E++  M++ GC
Sbjct: 358 MHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGC 417

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V +Y  +++  C++     A CL   M  E   P+ +T+NT + GL   G +  A+K
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIK 477

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           + D+M  +   P++ T+   +D L K+    EA  + + + +   EL + TYN +I G C
Sbjct: 478 VFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC 537

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
             G L  A +L  ++  +G  PD +T + +I   CK+G+++ A  L+  + A    P  +
Sbjct: 538 CAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDII 597

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            + +L+ G   +    + +V L +M +E +
Sbjct: 598 AYTSLISGICTHIGVEEAIVYLRRMLSEGI 627



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 143/496 (28%), Positives = 239/496 (48%), Gaps = 12/496 (2%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           +  M K    P + ++ ILL  L KN + D    L   ++S G  PD      LI+ LCK
Sbjct: 169 YSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK 228

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
           +G    A     R L   FTP+   +N LING+C E    EA +L  ++     DPNV++
Sbjct: 229 LGKVKEA-----RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVIS 283

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           + T+IN L    N  ++L +  +M   F   C P++ T+ S+I G    G   +A +   
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKM---FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M    + PNV+ YN+L+ G C      +A  +F +M  NG  P+V T++A+I+   K G
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            +D  + +   MI  G +P+ V Y  ++D  C     ++A  L  +M  + C  +  ++N
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
             I   C   +V+ A+ ++ +M +    P+  TYN LL  L +    G+A  L+  M+  
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVF--QAIRNCKCELRIETYNCLINGLCKMGRLK 486
            +  +  T+ T I G C  G + EA+++     +R  K +    T N +I+  CK G++ 
Sbjct: 521 GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAI--TVNIVIDAYCKQGKVN 578

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +L  RL      PD++  +++I  +C    +++A   L  M ++   P+  T+  L+
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638

Query: 547 RGFVQNNKKSKVVVLL 562
           R    N   S  V  L
Sbjct: 639 RHLFSNMGHSGAVQFL 654



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 204/408 (50%), Gaps = 3/408 (0%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T  EA    D M+     P + S+T ++  L+     +  +++  ++ + G  P+L    
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
            LI      G +  A     R++R    PN V +N L++GLC++  + +A  +F ++ + 
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEIN 380

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            C PNV T++ LI+G  +  +   A +++  M+      C P+VV Y  ++D LC++   
Sbjct: 381 GCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG---CHPNVVAYTCMVDVLCRNSMF 437

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           ++A  L+  M+  N  PN +T+N+ I G C       A  +F +M ++G  P+  T+N +
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++   KD +  +   L++ M  RG+  + VTYN+++ G+C  G +  A EL   MV +G 
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
           + D  + NI+I+A CK  KV  A+ L   + + +  P +I Y +L+SG+     + +A+ 
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
            + +M    + P+  T+   +  L  N     AVQ   A+     E R
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFETR 665



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 203/465 (43%), Gaps = 68/465 (14%)

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           L    +  +AL+ F+ + N       P  +TY  +I+ L  +  +D  + LL QMK   I
Sbjct: 50  LKHEHDITLALEYFKSIANSKSFKHTP--LTYQMMIEKLASEREMDCVQYLLQQMKLEGI 107

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           + +   + S+I  +      ++A   F  M D  V+P V  +N +++    + +   +N 
Sbjct: 108 SCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINP 167

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS--------- 366
           +   M + G+ P+  TYN L+   C   R+  A +L V M SKGC  D  S         
Sbjct: 168 IYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC 227

Query: 367 ---------------------YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
                                YN LIN  CK+   E+A  L  EM+++ I P+VI+Y T+
Sbjct: 228 KLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 406 LSGLFQVGNL-----------------------------------GDALKLIDKMQLNDV 430
           ++ L   GN+                                    +AL   D+M    V
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           VP+   +   + GLC    + +AV VF  +    C   + TY+ LI+G  K G L  A +
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           +++ +   G  P+VV  + M+  LC+    ++A  L+ +M+ +NC P+ VTF T ++G  
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            + +    + +  +M        + +  ++++D L KD+++ E  
Sbjct: 468 GSGRVDWAIKVFDQMGNSG-CFPNTTTYNELLDSLLKDRRFGEAF 511


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 266/525 (50%), Gaps = 39/525 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + AV  F  + +   +P   +++ L++ LAK+ Q D  + L   + + G+  D    N L
Sbjct: 175 DRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNAL 234

Query: 123 INCLCKMGITSGAFVVLGRILRS-CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++   + G+   A  V  +++R    +PN  T+  +++GLC  GR  EA  ++ ++    
Sbjct: 235 LSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANN 294

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK----- 236
              + VT+  LI+GLCR+ +   A +++ +MV + G +   DV  YNS+I G C+     
Sbjct: 295 HQADTVTYGILIHGLCRSGDVDSAARVYSDMV-KAGLVL--DVSVYNSLIKGFCEVGRTG 351

Query: 237 -----------------------------DGFVDKAKELLLQMK-DRNINPNVITYNSLI 266
                                         G V +A ELL Q++ D + +P+ +T+ +LI
Sbjct: 352 EAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLI 411

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C       A  +  +  ++G + DV ++++MIN  CKDG+    N + + M++ G  
Sbjct: 412 HGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCK 471

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P++  YN+L++GFC V +I+ A ++++ M S GC   + +YN LI+  CK +K ++A  L
Sbjct: 472 PNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSL 531

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            +EML    +P + TY +L+ GL +   +  AL++ D++    +  D       I GLC 
Sbjct: 532 TKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCS 591

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G V EA  ++  ++   C   + TYN L++G  ++G +  A  L+  +   G  PD+VT
Sbjct: 592 AGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVT 651

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            +T I  LC   +  +   LL ++ A   +P+ +T+  L+R  ++
Sbjct: 652 YNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 255/523 (48%), Gaps = 43/523 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF-----PDLFVLNLLINCLCKMGITS 133
           PG+ S   LL    + ++Y    + F  L S+G F     P+L   N+++  LC  G   
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASL-SHGAFGRRIAPNLQTYNIILRSLCARGDVD 175

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            A  +   + R    P+ VT++ L++GL    ++  A  L  ++  +    + V +N L+
Sbjct: 176 RAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALL 235

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           +G  RT     A+K++E++V + GA   P++ TY  ++DGLCK G   +A E+  +M   
Sbjct: 236 SGCFRTGMFEKAMKVWEQLVRDPGA--SPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK- 312
           N   + +TY  LI G C   D   A  ++ +M+  G+  DV  +N++I   C+ G+  + 
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353

Query: 313 ------------------------------VNRLLELMIQ----RGVNPDTVTYNSLMDG 338
                                         V+   EL+ Q       +PD VT+ +L+ G
Sbjct: 354 WKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHG 413

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C  G  +RA E+     + G   DV+SY+ +IN  CKD +  DA  +Y+ M+ +  +P+
Sbjct: 414 LCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPN 473

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              YN L++G  +V  + DA+K+  +M  N   P   T+ T IDGLCK     EA  + +
Sbjct: 474 SHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTK 533

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +     +  I TY  LI GLC+  ++  A +++  +   G   DV+  + +IH LC  G
Sbjct: 534 EMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAG 593

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           ++D+A  + L+M+ KNC P+ VT+ TL+ GF +     K   L
Sbjct: 594 KVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASL 636



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 213/424 (50%), Gaps = 5/424 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   +  M+         ++ IL+  L ++   D+   ++  +   GL  D+ V N LI
Sbjct: 282 EAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLI 341

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFAC 182
              C++G T  A+        S     T T+N +  GL   G + EA  L K+L N  +C
Sbjct: 342 KGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMVSEATELLKQLENDASC 400

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ VTF TLI+GLC       A ++ E+  N    +   DV +Y+S+I+  CKDG    
Sbjct: 401 SPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEEL---DVFSYSSMINRFCKDGRTHD 457

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+   M      PN   YN+LI GFC V    +A  ++IEM  NG  P ++T+N +I+
Sbjct: 458 ANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLID 517

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK  K  + + L + M++RG  PD  TY SL+ G C   ++  A  ++  ++  G + 
Sbjct: 518 GLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQV 577

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV  +NILI+  C   KV++A C+Y EM  +   P+++TYNTL+ G +++G++  A  L 
Sbjct: 578 DVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLW 637

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             +  N + PD  T+ T I GLC      E V +   +        + T++ L+  + K 
Sbjct: 638 TAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKY 697

Query: 483 GRLK 486
           G ++
Sbjct: 698 GPIQ 701



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 227/443 (51%), Gaps = 3/443 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + ++ ++L  L K  ++     ++ R+ +N    D     +LI+ LC+ G    A  
Sbjct: 261 SPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAAR 320

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V   ++++    +   +N LI G C  GR  EA + +     F+    + T+N +  GL 
Sbjct: 321 VYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTG-FSGIRQITTYNIMTKGLL 379

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            +     A +L +++ N+  A C PD VT+ ++I GLC++G+ ++A E+L   ++     
Sbjct: 380 DSGMVSEATELLKQLEND--ASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEEL 437

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +V +Y+S+I  FC      +A  ++  M+ +G +P+   +NA+IN  C+  K++   ++ 
Sbjct: 438 DVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIY 497

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M   G  P  +TYN+L+DG C   +   A  L   M+ +G + D+ +Y  LI   C+D
Sbjct: 498 IEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRD 557

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           +KV+ A+ ++ E+L   ++  V+ +N L+ GL   G + +A  +  +M+  +  P+  T+
Sbjct: 558 KKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTY 617

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T +DG  + G + +A  ++ AI +   +  I TYN  I GLC   R      L + +  
Sbjct: 618 NTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677

Query: 498 KGPIPDVVTCSTMIHWLCKEGQM 520
            G +P V+T S ++  + K G +
Sbjct: 678 TGIMPTVITWSILVRAVIKYGPI 700



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 224/467 (47%), Gaps = 39/467 (8%)

Query: 174 FKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGAICKPDVVTYNSII 231
           F+ L ++  C+P V + NTL++   R R    A   F  + +  FG    P++ TYN I+
Sbjct: 106 FRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIIL 165

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
             LC  G VD+A  L   ++ R + P+ +TY++L+ G    D    A  L  EM + GVQ
Sbjct: 166 RSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQ 225

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQ-RGVNPDTVTYNSLMDGFCLVGRISRARE 350
            D V +NA+++   + G  +K  ++ E +++  G +P+  TY  ++DG C +GR   A E
Sbjct: 226 ADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGE 285

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           ++  M++   + D  +Y ILI+  C+   V+ A  +Y +M+   +   V  YN+L+ G  
Sbjct: 286 VWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFC 345

Query: 411 QVGNLGDALKLIDKMQLNDV-----------------------------------VPDSF 435
           +VG  G+A K  D    + +                                    PD  
Sbjct: 346 EVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKV 405

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           TF T I GLC+NG+   A ++ +  RN   EL + +Y+ +IN  CK GR   A +++  +
Sbjct: 406 TFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNM 465

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G  P+    + +I+  C+  +++ A  + ++M +  C P+ +T+ TL+ G  +  K 
Sbjct: 466 VKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKY 525

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +   L  +M  E+    D+   + ++  L +DKK    L  +  +L
Sbjct: 526 QEASSLTKEM-LERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEIL 571



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 123/249 (49%), Gaps = 3/249 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++A   +  M+K    P    +  L+    +  + +  + ++  + SNG  P +   N 
Sbjct: 455 THDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNT 514

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+ LCK      A  +   +L   F P+  T+  LI GLC + ++  A R++ ++    
Sbjct: 515 LIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAG 574

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              +V+  N LI+GLC       A  ++ EM  +    C P++VTYN+++DG  + G +D
Sbjct: 575 LQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKN---CSPNLVTYNTLMDGFYEIGSID 631

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA  L   + D  + P+++TYN+ I G C  +   E   L  E++  G+ P V+T++ ++
Sbjct: 632 KAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILV 691

Query: 302 NYNCKDGKM 310
               K G +
Sbjct: 692 RAVIKYGPI 700


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 258/510 (50%), Gaps = 8/510 (1%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           +S +A+  F  M   +  P +  +  +L  L    ++  +  ++  +  +G+ P++F  N
Sbjct: 126 SSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYN 185

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +L+  LCK     GA  +L  +      P+ V++  LI+ LC  G++ EA  L       
Sbjct: 186 ILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AM 240

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
           +  P+V  +N LING+C+      A +L +EM+N+      P+V++Y +II+ L   G V
Sbjct: 241 SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG---IDPNVISYTTIINALSDAGNV 297

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           + +  +L +M  R  +PN+ T+ SLI GF       EA   +  M+  GV P+VV +NA+
Sbjct: 298 ELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNAL 357

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++  C    +     +   M   G  P+  TY++L+DG+   G +  A E++  M++ GC
Sbjct: 358 MHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGC 417

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +V +Y  +++  C++     A CL   M  E   P+ +T+NT + GL   G +  A+K
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIK 477

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           + D+M  +   P++ T+   +D L K+    EA  + + + +   EL + TYN +I G C
Sbjct: 478 VFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC 537

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
             G L  A +L  ++  +G  PD +T + +I   CK+G+++ A  L+  + A    P  +
Sbjct: 538 CAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDII 597

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            + +L+ G   +    + +V L +M +E +
Sbjct: 598 AYTSLISGICTHIGVEEAIVYLRRMLSEGI 627



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 239/497 (48%), Gaps = 12/497 (2%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            +  M K    P + ++ ILL  L KN + D    L   ++S G  PD      LI+ LC
Sbjct: 168 IYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC 227

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K+G    A     R L   FTP+   +N LING+C E    EA +L  ++     DPNV+
Sbjct: 228 KLGKVKEA-----RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVI 282

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           ++ T+IN L    N  ++L +  +M   F   C P++ T+ S+I G    G   +A +  
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKM---FARGCSPNLHTFTSLIKGFFLKGGSHEALDFW 339

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M    + PNV+ YN+L+ G C      +A  +F +M  NG  P+V T++A+I+   K 
Sbjct: 340 DRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKA 399

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D  + +   MI  G +P+ V Y  ++D  C     ++A  L  +M  + C  +  ++
Sbjct: 400 GDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTF 459

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N  I   C   +V+ A+ ++ +M +    P+  TYN LL  L +    G+A  L+  M+ 
Sbjct: 460 NTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEH 519

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVF--QAIRNCKCELRIETYNCLINGLCKMGRL 485
             +  +  T+ T I G C  G + EA+++     +R  K +    T N +I+  CK G++
Sbjct: 520 RGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAI--TVNIVIDAYCKQGKV 577

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +L  RL      PD++  +++I  +C    +++A   L  M ++   P+  T+  L
Sbjct: 578 NIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVL 637

Query: 546 LRGFVQNNKKSKVVVLL 562
           +R    N   S  V  L
Sbjct: 638 VRHLFSNMGHSGAVQFL 654



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 201/399 (50%), Gaps = 3/399 (0%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T  EA    D M+     P + S+T ++  L+     +  +++  ++ + G  P+L    
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
            LI      G +  A     R++R    PN V +N L++GLC++  + +A  +F ++ + 
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEIN 380

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            C PNV T++ LI+G  +  +   A +++  M+      C P+VV Y  ++D LC++   
Sbjct: 381 GCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG---CHPNVVAYTCMVDVLCRNSMF 437

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           ++A  L+  M+  N  PN +T+N+ I G C       A  +F +M ++G  P+  T+N +
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++   KD +  +   L++ M  RG+  + VTYN+++ G+C  G +  A EL   MV +G 
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
           + D  + NI+I+A CK  KV  A+ L   + + +  P +I Y +L+SG+     + +A+ 
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            + +M    + P+  T+   +  L  N     AVQ   A
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDA 656



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 203/465 (43%), Gaps = 68/465 (14%)

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           L    +  +AL+ F+ + N       P  +TY  +I+ L  +  +D  + LL QMK   I
Sbjct: 50  LKHEHDITLALEYFKSIANSKSFKHTP--LTYQMMIEKLASEREMDCVQYLLQQMKLEGI 107

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           + +   + S+I  +      ++A   F  M D  V+P V  +N +++    + +   +N 
Sbjct: 108 SCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINP 167

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS--------- 366
           +   M + G+ P+  TYN L+   C   R+  A +L V M SKGC  D  S         
Sbjct: 168 IYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC 227

Query: 367 ---------------------YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
                                YN LIN  CK+   E+A  L  EM+++ I P+VI+Y T+
Sbjct: 228 KLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 406 LSGLFQVGNL-----------------------------------GDALKLIDKMQLNDV 430
           ++ L   GN+                                    +AL   D+M    V
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           VP+   +   + GLC    + +AV VF  +    C   + TY+ LI+G  K G L  A +
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           +++ +   G  P+VV  + M+  LC+    ++A  L+ +M+ +NC P+ VTF T ++G  
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            + +    + +  +M        + +  ++++D L KD+++ E  
Sbjct: 468 GSGRVDWAIKVFDQMGNSG-CFPNTTTYNELLDSLLKDRRFGEAF 511


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 252/487 (51%), Gaps = 4/487 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+ FFD M +  PSP   ++ +L+    KN        L+ ++ +  + P +F++N LI 
Sbjct: 368 ALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIR 427

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
              K+     A  +    + +C   N  T+N L++ LC EG++ EA  L++K+      P
Sbjct: 428 GFLKVESREEASKLFDEAV-ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAP 486

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
             V++N++I G CR  N  +A  +F +M++      KP+V+TY+ ++DG  K+G  + A 
Sbjct: 487 TKVSYNSMILGHCRQGNLDMAASVFSDMLD---CGLKPNVITYSILMDGYFKNGDTEYAF 543

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            +  +M D NI P+  TYN  I G C V    EA+ +  + ++ G  P  +T+N++++  
Sbjct: 544 YVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGF 603

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K+G +         M + GV+P+ +TY +L++GFC       A ++   M +KG   D+
Sbjct: 604 IKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDI 663

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y  LI+  CK Q +E A  L+ E+L   + P+ + YN+L+SG   + N+  AL L  +
Sbjct: 664 AAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKR 723

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    +  D  T+ T IDGL K G ++ A+ ++  +        I  Y  LINGLC  G+
Sbjct: 724 MLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQ 783

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           L+ A K+   ++     P+V   + +I    K G + +A  L  +M  K   P++ T+  
Sbjct: 784 LENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDI 843

Query: 545 LLRGFVQ 551
           L+ G ++
Sbjct: 844 LINGKIK 850



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 155/574 (27%), Positives = 273/574 (47%), Gaps = 40/574 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A+  F+ +++    P +     LLT L KN        +++++   G+  D F ++++
Sbjct: 191 NDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIM 250

Query: 123 -----------------------------------INCLCKMGITSGAFVVLGRILRSCF 147
                                              I   CK      A  +L  +    +
Sbjct: 251 MRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGW 310

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+  TF  +I     +G ++EA RL  ++       NVV   TL+ G C+    + AL+
Sbjct: 311 VPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALE 370

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
            F++M NE G    P+ VTY  +I+  CK+G + KA +L  QMK++NI P V   NSLI 
Sbjct: 371 FFDKM-NENGP--SPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIR 427

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GF  V+  +EA  LF E +   +  ++ T+N+++++ CK+GKM +   L + M+ +G+ P
Sbjct: 428 GFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAP 486

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             V+YNS++ G C  G +  A  +F  M+  G + +V +Y+IL++   K+   E A  ++
Sbjct: 487 TKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVF 546

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             M+ E I PS  TYN  ++GL +VG   +A  ++ K      VP   T+ + +DG  K 
Sbjct: 547 DRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKE 606

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G V  A+  ++ +        + TY  LING CK      A K+ + +++KG   D+   
Sbjct: 607 GSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAY 666

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
             +I   CK+  ++ A+ L  ++      P+ V + +L+ G+   N     + L  +M  
Sbjct: 667 GALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLG 726

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           E  +  DL   + ++D L K+ +    L+ +  +
Sbjct: 727 EG-ISCDLQTYTTLIDGLLKEGRLVLALDLYSEM 759



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 253/535 (47%), Gaps = 41/535 (7%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           PS G  +FT ++    K       + L   + S G+  ++ V   L+   CK      A 
Sbjct: 312 PSEG--TFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSAL 369

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
               ++  +  +PN VT+  LI   C  G + +A  L+ ++      P V   N+LI G 
Sbjct: 370 EFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGF 429

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
            +  +   A KLF+E V    A    ++ TYNS++  LCK+G + +A  L  +M D+ + 
Sbjct: 430 LKVESREEASKLFDEAV----ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLA 485

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P  ++YNS+I G C   +   A  +F +M+D G++P+V+T++ +++   K+G  +    +
Sbjct: 486 PTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYV 545

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
            + M+   + P   TYN  ++G C VGR S A+++    V KG      +YN +++   K
Sbjct: 546 FDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIK 605

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           +  V  A+  YREM    + P+VITY TL++G  +  N   ALK+ ++M+   +  D   
Sbjct: 606 EGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAA 665

Query: 437 FATYIDGLCKNGFVLEAVQVFQAI----------------------RNCKCELRIE---- 470
           +   IDG CK   +  A  +F  +                       N +  L ++    
Sbjct: 666 YGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRML 725

Query: 471 ---------TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                    TY  LI+GL K GRL  A  L+  +  KG IPD++  + +I+ LC +GQ++
Sbjct: 726 GEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLE 785

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            A  +L +ME  +  P+   +  L+ G  +     +   L ++M  + L  +D +
Sbjct: 786 NAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTT 840



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 250/559 (44%), Gaps = 74/559 (13%)

Query: 84  FTILLTMLA--KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           FT+ + M A  K+   +     F    S G+  D    +++I   CK      A  +L  
Sbjct: 245 FTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKD 304

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +    + P+  TF  +I     +G ++EA RL  ++       NVV   TL+ G C+   
Sbjct: 305 MRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDK 364

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
            + AL+ F++M NE G    P+ VTY  +I+  CK+G + KA +L  QMK++NI P V  
Sbjct: 365 LVSALEFFDKM-NENGP--SPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFI 421

Query: 262 YNSLICGFCCVDDWKEAKCLFIE----------------------------------MMD 287
            NSLI GF  V+  +EA  LF E                                  M+D
Sbjct: 422 VNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLD 481

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G+ P  V++N+MI  +C+ G +D    +   M+  G+ P+ +TY+ LMDG+   G    
Sbjct: 482 KGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEY 541

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A  +F  MV +      ++YNI IN  CK  +  +A  + ++ + +   P  +TYN+++ 
Sbjct: 542 AFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMD 601

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G  + G++  AL    +M  + V P+  T+ T I+G CKN     A+++   +RN   EL
Sbjct: 602 GFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLEL 661

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP------------------------- 502
            I  Y  LI+G CK   ++TA  LF  L   G  P                         
Sbjct: 662 DIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQ 721

Query: 503 ----------DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
                     D+ T +T+I  L KEG++  A DL  +M AK  +P  + +  L+ G    
Sbjct: 722 KRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGK 781

Query: 553 NKKSKVVVLLHKMAAEKLV 571
            +      +L +M  + + 
Sbjct: 782 GQLENAQKILAEMERDSIT 800



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 203/386 (52%), Gaps = 3/386 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   +  M+    +P   S+  ++    +    D   S+F  +   GL P++   ++L
Sbjct: 470 SEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSIL 529

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++   K G T  AF V  R++     P+  T+N  INGLC  GR  EA  + KK      
Sbjct: 530 MDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGF 589

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P  +T+N++++G  +  +   AL  + EM  E G    P+V+TY ++I+G CK+   D 
Sbjct: 590 VPVCLTYNSIMDGFIKEGSVSSALTAYREMC-ESGV--SPNVITYTTLINGFCKNNNTDL 646

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++  +M+++ +  ++  Y +LI GFC   D + A  LF E++D G+ P+ V +N++I+
Sbjct: 647 ALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLIS 706

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                  M+    L + M+  G++ D  TY +L+DG    GR+  A +L+  M +KG   
Sbjct: 707 GYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIP 766

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  Y +LIN  C   ++E+A  +  EM  + I P+V  YN L++G F+ GNL +A +L 
Sbjct: 767 DIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLH 826

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNG 448
           ++M    + P+  T+   I+G  K G
Sbjct: 827 NEMLDKGLTPNDTTYDILINGKIKGG 852



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 199/376 (52%), Gaps = 11/376 (2%)

Query: 56  KSGNITSNEAVY--FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
           + GN+    +V+    DC +K    P + +++IL+    KN   +    +F R+    + 
Sbjct: 500 RQGNLDMAASVFSDMLDCGLK----PNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIV 555

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P  F  N+ IN LCK+G TS A  +L + +   F P  +T+N +++G   EG +  A   
Sbjct: 556 PSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTA 615

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           ++++      PNV+T+ TLING C+  NT +ALK+  EM N+   +   D+  Y ++IDG
Sbjct: 616 YREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLEL---DIAAYGALIDG 672

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            CK   ++ A  L  ++ D  ++PN + YNSLI G+  +++ + A  L   M+  G+  D
Sbjct: 673 FCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCD 732

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           + T+  +I+   K+G++     L   M  +G+ PD + Y  L++G C  G++  A+++  
Sbjct: 733 LQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILA 792

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M       +V  YN LI  + K   +++A  L+ EML + + P+  TY+ L++G  + G
Sbjct: 793 EMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852

Query: 414 NLGDALKLIDKMQLND 429
           N   ALK +  ++  D
Sbjct: 853 N--SALKSLLSLKFKD 866



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 232/524 (44%), Gaps = 42/524 (8%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D+ + N L+N   K    + A     R++ S   P     NFL+  L     I EA  ++
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           +K+ +     +  T + ++    +  N   A K F E  +      K D   Y+ +I   
Sbjct: 233 EKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRG---VKLDAAAYSIVIQAF 289

Query: 235 CKDGFVDKAKELLLQMKDRNINP-----------------------------------NV 259
           CK+  V+ A  LL  M+D+   P                                   NV
Sbjct: 290 CKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNV 349

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +   +L+ G+C  D    A   F +M +NG  P+ VT+  +I + CK+G M K   L   
Sbjct: 350 VVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQ 409

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR-HDVYSYNILINANCKDQ 378
           M  + + P     NSL+ GF  V     A +LF   V+  C   ++++YN L++  CK+ 
Sbjct: 410 MKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVA--CDIANIFTYNSLLSWLCKEG 467

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K+ +A  L+++ML + + P+ ++YN+++ G  + GNL  A  +   M    + P+  T++
Sbjct: 468 KMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYS 527

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +DG  KNG    A  VF  + +        TYN  INGLCK+GR   A  +  +   K
Sbjct: 528 ILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK 587

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +P  +T ++++    KEG +  A     +M      P+ +T+ TL+ GF +NN     
Sbjct: 588 GFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLA 647

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           + + ++M  + L + D++    ++D   K +        F  LL
Sbjct: 648 LKMRNEMRNKGLEL-DIAAYGALIDGFCKKQDIETASWLFSELL 690



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 214/463 (46%), Gaps = 5/463 (1%)

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +G   R  F  +   +N+L+N      ++ +A   F +L      P +   N L+  L +
Sbjct: 162 IGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVK 221

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A +++E+MV +       D  T + ++    KD   ++AK+  L+ K R +  +
Sbjct: 222 NDMIYEAREVYEKMVLKG---VHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLD 278

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              Y+ +I  FC   D + A  L  +M D G  P   TF ++I    K G M +  RL +
Sbjct: 279 AAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKD 338

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+  GV  + V   +L+ G+C   ++  A E F  M   G   +  +Y +LI   CK+ 
Sbjct: 339 EMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNG 398

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +  A  LY +M ++ I P+V   N+L+ G  +V +  +A KL D+    D+  + FT+ 
Sbjct: 399 NMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYN 457

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +  LCK G + EA  ++Q + +        +YN +I G C+ G L  A  +F  +   
Sbjct: 458 SLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDC 517

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P+V+T S ++    K G  + A  +   M  +N VPS+ T+   + G  +  + S+ 
Sbjct: 518 GLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEA 577

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             +L K   +  V   L+ +S ++D   K+      L  +R +
Sbjct: 578 QDMLKKFVEKGFVPVCLTYNS-IMDGFIKEGSVSSALTAYREM 619


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/510 (29%), Positives = 252/510 (49%), Gaps = 40/510 (7%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P ++S  +LL  L    ++  V + F  L + G  PD F  N  +      G    A 
Sbjct: 119 PLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEAL 178

Query: 137 VVLGRILRS--CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
            +L R+ RS     P+  ++N +I GL   G+  +A ++F ++      PN +T+NT+I+
Sbjct: 179 AMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMID 238

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G  +  +     +L ++M+ +     KP+VVTYN ++ GLC+ G +D+ + L+ +M   +
Sbjct: 239 GHVKGGDLEAGFRLRDQMLQDGR---KPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYS 295

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + P+  TY+ L  G     D +    LF E +  GV     T + ++N  CKDGK+ K  
Sbjct: 296 MLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAE 355

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           ++LE+++  G+ P T  YN+L++G+C V  +  A  +F  M S+  R D  +YN LIN  
Sbjct: 356 QVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGL 415

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK + + +A  L  EM    + PSV T+NTL+    + G L     ++  MQ   +  + 
Sbjct: 416 CKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNV 475

Query: 435 FTFATYIDGLCKNGFVLEAV---------------QVFQAIRNCKCE--------LRIE- 470
            +F + +   CKNG + EAV               QV+ +I +   E        L +E 
Sbjct: 476 ISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEK 535

Query: 471 -----------TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
                      TYN L+ GLCK  ++  A +L + L ++G  PDVV+ +T+I   C +G 
Sbjct: 536 MKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGD 595

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            D+A +LL +M   +  P+  T+  LL   
Sbjct: 596 TDRALELLQEMHKYDIRPTLRTYHPLLSAL 625



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 248/498 (49%), Gaps = 9/498 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P   S+ +++  L ++ +    + +F  +   G+ P+    N +I+   K G     F
Sbjct: 191 PPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGF 250

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  ++L+    PN VT+N L++GLC  GR+ E   L  ++  ++  P+  T++ L +GL
Sbjct: 251 RLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGL 310

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
            RT ++   L LF E + + G I      T + +++GLCKDG V KA+++L  +    + 
Sbjct: 311 TRTGDSRTMLSLFGESLKK-GVIIG--AYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 367

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P    YN+LI G+C V D + A  +F +M    ++PD +T+NA+IN  CK   + +   L
Sbjct: 368 PTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDL 427

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           +  M + GV+P   T+N+L+D +   G++ +   +   M  KG + +V S+  ++ A CK
Sbjct: 428 VMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCK 487

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           + K+ +AV +  +M+ + + P+   YN+++    + G    A  L++KM+ + V    FT
Sbjct: 488 NGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFT 547

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   + GLCKN  + EA ++   + N      + +YN +I+  C  G    A +L   + 
Sbjct: 548 YNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMH 607

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
                P + T   ++  L   G++     L   M  KN  PS   + T      +   +S
Sbjct: 608 KYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT------RCENES 661

Query: 557 KVVVLLHKMAAEKLVVSD 574
           KV  L  +M+ + +   D
Sbjct: 662 KVASLKKEMSEKGIAFDD 679



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 220/417 (52%), Gaps = 3/417 (0%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D M++    P + ++ +LL+ L +  + D   +L   + S  + PD F  ++L + L + 
Sbjct: 254 DQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRT 313

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G +     + G  L+        T + L+NGLC +G++ +A ++ + L      P    +
Sbjct: 314 GDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIY 373

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           NTLING C+ R+   A  +FE+M +      +PD +TYN++I+GLCK   + +A++L+++
Sbjct: 374 NTLINGYCQVRDLQGAFSIFEQMKSRH---IRPDHITYNALINGLCKMEMITEAEDLVME 430

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+   ++P+V T+N+LI  +      ++   +  +M D G++ +V++F +++   CK+GK
Sbjct: 431 MEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGK 490

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +   +L+ MI + V P+   YNS++D +   G   +A  L   M S G    +++YN+
Sbjct: 491 IPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNL 550

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L+   CK+ ++++A  L   + ++ +RP V++YNT++S     G+   AL+L+ +M   D
Sbjct: 551 LLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYD 610

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
           + P   T+   +  L   G V +   ++Q + +   E     Y        K+  LK
Sbjct: 611 IRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVASLK 667



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 210/425 (49%), Gaps = 1/425 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+  + N L+  L + GR  +    F  L      P+   +N  +       +   AL +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
              M    GA   PD  +YN +I GL + G    A ++  +M DR + PN ITYN++I G
Sbjct: 181 LRRMGRSEGA-PPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
                D +    L  +M+ +G +P+VVT+N +++  C+ G+MD+   L++ M    + PD
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
             TY+ L DG    G       LF   + KG     Y+ +IL+N  CKD KV  A  +  
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            ++   + P+   YNTL++G  QV +L  A  + ++M+   + PD  T+   I+GLCK  
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKME 419

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + EA  +   +     +  +ET+N LI+   + G+L+    +   +Q KG   +V++  
Sbjct: 420 MITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFG 479

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +++   CK G++ +A  +L DM  K+ VP+   + +++  ++++    +  +L+ KM + 
Sbjct: 480 SVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSS 539

Query: 569 KLVVS 573
            +  S
Sbjct: 540 GVSAS 544



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 186/377 (49%), Gaps = 3/377 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E     D M      P   +++IL   L +     T++SLF      G+    +  ++L
Sbjct: 282 DETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSIL 341

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G  + A  VL  ++ +   P T  +N LING C    +  A  +F+++     
Sbjct: 342 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHI 401

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ +T+N LINGLC+      A  L  EM     +   P V T+N++ID   + G ++K
Sbjct: 402 RPDHITYNALINGLCKMEMITEAEDLVMEMEK---SGVDPSVETFNTLIDAYGRAGQLEK 458

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              +L  M+D+ I  NVI++ S++  FC      EA  +  +M+   V P+   +N++I+
Sbjct: 459 CFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIID 518

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              + G  ++   L+E M   GV+    TYN L+ G C   +I  A EL  ++ ++G R 
Sbjct: 519 AYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRP 578

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV SYN +I+A C     + A+ L +EM    IRP++ TY+ LLS L   G + D   L 
Sbjct: 579 DVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLY 638

Query: 423 DKMQLNDVVPDSFTFAT 439
             M   +V P S  + T
Sbjct: 639 QHMVHKNVEPSSSIYGT 655


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 246/492 (50%), Gaps = 6/492 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +   EA      M +   +P + +F IL+  LA+ +++  V  + + +   G+ P+
Sbjct: 268 KSGRV--EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPN 325

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             + N LI   C+ G  S A  +   ++     P  VT+N +   LC EG +  A R+ +
Sbjct: 326 EVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILE 385

Query: 176 KLNVFACDPNVVTFNTLINGLC-RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            +       +   FNT++  L  RTR     + +  EMV       +P+     + +  L
Sbjct: 386 DMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRG---MRPNDPLMTACMREL 442

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK G   +A  +  +  ++ +  N+ T N+LI G C     KEA  +   M++ G++ D 
Sbjct: 443 CKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDS 502

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +T+N MI   CKD KM++  +L   M +RG  PD  T+N+L+  +C +G++     L   
Sbjct: 503 ITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQ 562

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M ++G + D+ SY  +I+ +CK + +  A     E++   ++P+V  YN L+ G  + G+
Sbjct: 563 MKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGD 622

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A+  ++ M+ N + P + T+ + +  +C  G V EA  +F   R    +L +  Y  
Sbjct: 623 ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTI 682

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +I G CK+G++  A   F  ++ +G  P+ +T +T+++   K G  ++A+ L  +M    
Sbjct: 683 MIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG 742

Query: 535 CVPSEVTFCTLL 546
            +P  +T+ TL+
Sbjct: 743 VIPDNITYGTLI 754



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 242/498 (48%), Gaps = 4/498 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+T ++  L K  + D    +   L   GL P +   N+L++ LCK G    AF + GR+
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
            +   TP+ VTF  LINGL    R  E   + +++      PN V +N LI   CR  + 
Sbjct: 283 EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 342

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             AL+LF+EMV +     KP  VTYN I   LCK+G +++A+ +L  M    +  +   +
Sbjct: 343 SQALRLFDEMVLKK---MKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLF 399

Query: 263 NSLICGFCCVDDWKEAKCLFI-EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           N+++          E+      EM+  G++P+     A +   CK GK  +   +    +
Sbjct: 400 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 459

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            +G+  +  T N+L+ G C    +  A ++  +M++KG   D  +YNI+I   CKD K+E
Sbjct: 460 NKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKME 519

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           +A+ L+ +M     +P + T+NTLL     +G + +   L+D+M+   + PD  ++ T I
Sbjct: 520 EAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTII 579

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DG CK   + +A +    + +   +  +  YN LI G  + G +  A      ++  G  
Sbjct: 580 DGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQ 639

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P  VT  ++++W+C  G +++A  +       N     + +  +++G+ +  K  + V  
Sbjct: 640 PTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAY 699

Query: 562 LHKMAAEKLVVSDLSLSS 579
             +M +  +  + L+ ++
Sbjct: 700 FEEMRSRGISPNKLTYTT 717



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 219/464 (47%), Gaps = 21/464 (4%)

Query: 150 NTVTFNFLINGLC---AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           +T + +FLI+      A+G +  AA  F+ L+     P++ T N  +  L R      A 
Sbjct: 146 STPSSDFLIHTFITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAR 205

Query: 207 KLFEEM-------VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
           ++F+EM       +NE+         +Y ++I  LCK G VD   E+L ++    + P V
Sbjct: 206 EVFDEMRESRNVALNEY---------SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTV 256

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TYN L+   C     +EA  L   M   G+ P VVTF  +IN   +  +  +V  +L+ 
Sbjct: 257 VTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQE 316

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M Q GV+P+ V YN L+   C  G  S+A  LF  MV K  +    +YN++  A CK+ +
Sbjct: 317 MEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGE 376

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQ-VGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +E A  +  +MLS  +      +NT+++ L Q    L   + + ++M    + P+     
Sbjct: 377 MERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMT 436

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +  LCK G   EAV ++    N    + + T N LI+GLC+   +K A K+   + +K
Sbjct: 437 ACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNK 496

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G   D +T + MI   CK+ +M++A  L  DM  +   P   TF TLL  +    K  + 
Sbjct: 497 GIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEET 556

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             LL +M  E L   D+     ++D   K K  R+       L+
Sbjct: 557 FHLLDQMKTEGL-QPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 599



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 213/452 (47%), Gaps = 4/452 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M ++  SP    +  L+    +       + LF  +    + P     NL+   LCK G 
Sbjct: 317 MEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGE 376

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA-ARLFKKLNVFACDPNVVTFN 190
              A  +L  +L    T +   FN ++  L    R +E+   +  ++      PN     
Sbjct: 377 MERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMT 436

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
             +  LC+      A+ ++ + +N+   +   ++ T N++I GLC+  ++ +A +++  M
Sbjct: 437 ACMRELCKGGKHQEAVGIWFKTLNKGLGV---NLATSNALIHGLCEGKYMKEATKVIQTM 493

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
            ++ I  + ITYN +I G C     +EA  L  +M   G +PD+ TFN +++  C  GKM
Sbjct: 494 LNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKM 553

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           ++   LL+ M   G+ PD V+Y +++DG C    I +A+E    ++ +G + +V+ YN L
Sbjct: 554 EETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNAL 613

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I    ++  +  A+     M S  I+P+ +TY +L+  +   G + +A  +  + + N+V
Sbjct: 614 IGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNV 673

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
                 +   I G CK G ++EAV  F+ +R+        TY  L+    K G  + A K
Sbjct: 674 DLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASK 733

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
           LF  +   G IPD +T  T+I    +   +DK
Sbjct: 734 LFDEMVGSGVIPDNITYGTLIARCSEVNSLDK 765



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 127/311 (40%), Gaps = 38/311 (12%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+     M +    P + +F  LL       + +    L  ++ + GL PD+      
Sbjct: 519 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDI------ 572

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
                                        V++  +I+G C    I +A     +L     
Sbjct: 573 -----------------------------VSYGTIIDGHCKAKDIRKAKEYLTELMDRGL 603

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV  +N LI G  R  +   A+   E M +      +P  VTY S++  +C  G V++
Sbjct: 604 KPNVFIYNALIGGYGRNGDISGAIDAVETMKSNG---IQPTNVTYGSLMYWMCHAGLVEE 660

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK +  Q ++ N++  VI Y  +I G+C +    EA   F EM   G+ P+ +T+  ++ 
Sbjct: 661 AKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMY 720

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G  ++ ++L + M+  GV PD +TY +L+     V  + +       + S     
Sbjct: 721 AYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTK 780

Query: 363 DVYSYNILINA 373
           D   YNIL N 
Sbjct: 781 DDRMYNILSNG 791


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/500 (29%), Positives = 250/500 (50%), Gaps = 3/500 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+    SP + +++ L+    K +++DT   +   +   G   +    N+LI  LC+ G 
Sbjct: 108 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 167

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              AF     +      P+  T+  LINGLC   R  EA  L  +++     PNVV +  
Sbjct: 168 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 227

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+G  R  N   A K+ +EMV    A  +P+ +TY++++ GLCK G +D+A  LL QM 
Sbjct: 228 LIDGFMREGNADEAFKMIKEMV---AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 284

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             +  P+ ITYN +I G     + K+A  L  EM + G+ P+V T++ MI+  C+ G+ +
Sbjct: 285 RDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 344

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K + LLE M  +G+ P+   Y  L+ G+C  G +S A E+F  M       D+Y YN LI
Sbjct: 345 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 404

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
               K  +VE++   + +M    + P+  TY+ L+ G  + G+L  A +L+ +M    + 
Sbjct: 405 FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 464

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+   +   ++   K+  + +    F+++ +    L    Y  LI+ L   G ++ A ++
Sbjct: 465 PNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 524

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              ++  G +PDV   S++I  LCK    +KA  +L +M  K   P+ V +  L+ G  +
Sbjct: 525 LSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCK 584

Query: 552 NNKKSKVVVLLHKMAAEKLV 571
           +   S    + + + A+ LV
Sbjct: 585 SGDISYARNVFNSILAKGLV 604



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 266/559 (47%), Gaps = 7/559 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG +    +N   KS    SNEA    D M   +  P +  +  L+    +    D    
Sbjct: 186 DGFTYGALINGLCKSRR--SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 243

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           + K + + G+ P+    + L+  LCKMG    A ++L +++R    P+T+T+N +I G  
Sbjct: 244 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 303

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
                 +A RL  ++      PNV T++ +I+GLC++     A  L EEM  +     KP
Sbjct: 304 RHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG---LKP 360

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +   Y  +I G C++G V  A E+  +M   N+ P++  YNSLI G   V   +E+   F
Sbjct: 361 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 420

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M + G+ P+  T++ +I+   K+G ++   +L++ M+  G+ P+ V Y  L++ +   
Sbjct: 421 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 480

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             I +    F SM+ +G   D   Y ILI+       +E A  +  E+      P V  Y
Sbjct: 481 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVY 540

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           ++L+SGL +  +   A  ++D+M    V P+   +   IDGLCK+G +  A  VF +I  
Sbjct: 541 SSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILA 600

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                   TY  LI+G CK+G +  A  L++ +   G  PD    S +       G +++
Sbjct: 601 KGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQ 660

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A  L+ +M  +    S  +F  L+ GF +  K  + + LLH +    LV + L++ + ++
Sbjct: 661 AMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN-II 718

Query: 583 DLLSKDKKYRECLNQFRHL 601
             LS+  K  E    F  L
Sbjct: 719 SGLSEAGKLSEVHTIFVEL 737



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 238/477 (49%), Gaps = 11/477 (2%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +L+ M+        V++   R  S+       VL++L++   K G    A  V+  +   
Sbjct: 17  LLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDR 76

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF----ACDPNVVTFNTLINGLCRTRN 201
              P+    N L+  L       +A  L  K+  F       P+V T++TLI   C+ R 
Sbjct: 77  GLAPSIRCCNALLKDLLRA----DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVRE 132

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A K+  EM  E G  C  + VTYN +I GLC+ G V++A      M+D  + P+  T
Sbjct: 133 FDTAKKVLVEM-RERG--CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 189

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y +LI G C      EAK L  EM    ++P+VV +  +I+   ++G  D+  ++++ M+
Sbjct: 190 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 249

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             GV P+ +TY++L+ G C +G++ RA  L   MV    R D  +YN++I  + +    +
Sbjct: 250 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKK 309

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           DA  L  EM +  I P+V TY+ ++ GL Q G    A  L+++M    + P++F +A  I
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 369

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            G C+ G V  A ++F  +        +  YN LI GL K+GR++ + K F ++Q +G +
Sbjct: 370 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 429

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           P+  T S +IH   K G ++ A  L+  M      P++V +  LL  + +++   KV
Sbjct: 430 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKV 486



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/544 (25%), Positives = 257/544 (47%), Gaps = 45/544 (8%)

Query: 48  AKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL 107
           A  ++   + GN  ++EA      M+     P   ++  L+  L K  Q D    L K++
Sbjct: 226 ANLIDGFMREGN--ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 283

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
             +   PD    NL+I    +      AF +L  +  +  +PN  T++ +I+GLC  G  
Sbjct: 284 VRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 343

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM--VNEFGAICKPDVV 225
            +A+ L +++      PN   +  LI+G CR  N  +A ++F++M  VN       PD+ 
Sbjct: 344 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL-----PDLY 398

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
            YNS+I GL K G V+++ +   QM++R + PN  TY+ LI G+    D + A+ L   M
Sbjct: 399 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458

Query: 286 MDNGVQP-DVV-------------------TFNAMINYN---------------CKDGKM 310
           +D G++P DV+                   TF +M++                    G M
Sbjct: 459 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 518

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           +   R+L  + + G  PD   Y+SL+ G C      +A  +   M  KG   ++  YN L
Sbjct: 519 EAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 578

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+  CK   +  A  ++  +L++ + P+ +TY +L+ G  +VG++ +A  L ++M    +
Sbjct: 579 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 638

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD+F ++    G    G + +A+ + + +   +    I ++N L++G CK G+++   K
Sbjct: 639 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF-LRGHASISSFNNLVDGFCKRGKMQETLK 697

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L H +  +G +P+ +T   +I  L + G++ + + + ++++ K    +   F +L    +
Sbjct: 698 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 757

Query: 551 QNNK 554
              K
Sbjct: 758 NQGK 761



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 126/573 (21%), Positives = 233/573 (40%), Gaps = 125/573 (21%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A      M++    P   ++ +++    ++        L   + + G+ P+++  +++
Sbjct: 274 DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIM 333

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC+ G    A  +L  +      PN   +  LI+G C EG +  A  +F K+     
Sbjct: 334 IHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 393

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++  +N+LI GL +      + K F +M  E G +  P+  TY+ +I G  K+G ++ 
Sbjct: 394 LPDLYCYNSLIFGLSKVGRVEESTKYFAQM-QERGLL--PNEFTYSGLIHGYLKNGDLES 450

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ----------- 291
           A++L+ +M D  + PN + Y  L+  +   DD ++    F  M+D GV            
Sbjct: 451 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 510

Query: 292 ------------------------PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                                   PDV  ++++I+  CK    +K   +L+ M ++GV+P
Sbjct: 511 NLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 570

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + V YN+L+DG C  G IS AR +F S+++KG   +  +Y  LI+ +CK   + +A  LY
Sbjct: 571 NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLY 630

Query: 388 REMLSERIRP----------------------------------SVITYNTLLSGLFQVG 413
            EML+  I P                                  S+ ++N L+ G  + G
Sbjct: 631 NEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRG 690

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR------------ 461
            + + LKL+  +    +VP++ T    I GL + G + E   +F  ++            
Sbjct: 691 KMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFS 750

Query: 462 -----------------------NCK------------------CELRIETYNCLINGLC 480
                                  +CK                    +   +Y  +++ LC
Sbjct: 751 SLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLC 810

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           + G+L  A  L   +  +G +   +     I W
Sbjct: 811 RKGKLSEALNLLKEMDKRGNLQPTLVALLGIFW 843



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 171/389 (43%), Gaps = 43/389 (11%)

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD----WKEAKCLFIEM 285
           ++D   K G V  A E++L M+DR + P++   N+L+      D     WK  +     M
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREF----M 108

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           +  G+ PDV T++ +I   CK  + D   ++L  M +RG   +TVTYN L+ G C  G +
Sbjct: 109 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 168

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A      M   G   D ++Y  LIN  CK ++  +A  L  EM    ++P+V+ Y  L
Sbjct: 169 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 228

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG----------------- 448
           + G  + GN  +A K+I +M    V P+  T+   + GLCK G                 
Sbjct: 229 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 288

Query: 449 --------FVLE----------AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
                    ++E          A ++   + N      + TY+ +I+GLC+ G  + A  
Sbjct: 289 RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L   +  KG  P+    + +I   C+EG +  A ++   M   N +P    + +L+ G  
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 408

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +  +  +      +M    L+ ++ + S 
Sbjct: 409 KVGRVEESTKYFAQMQERGLLPNEFTYSG 437



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 96/200 (48%)

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           ++L++   K  +V+DA  +   M    + PS+   N LL  L +   +    K+ + M  
Sbjct: 51  DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + PD +T++T I+  CK      A +V   +R   C L   TYN LI GLC+ G ++ 
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A      ++  G +PD  T   +I+ LCK  + ++A  LL +M      P+ V +  L+ 
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230

Query: 548 GFVQNNKKSKVVVLLHKMAA 567
           GF++     +   ++ +M A
Sbjct: 231 GFMREGNADEAFKMIKEMVA 250


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 256/510 (50%), Gaps = 26/510 (5%)

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
            M P+P   ++  LL  L   KQ+     L + +  N   PD     +LI+  C+ G+  
Sbjct: 183 SMPPAPNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVD 242

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            A  +L R+ +   TP  + +N +I+     GR+ EA  LF   +   C P++ ++N ++
Sbjct: 243 RAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLF---SCMPCKPDIFSYNAVL 299

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
            GLCR      A +L  EMV +    C PD VT+N++I  LC  G VD A E++ QM   
Sbjct: 300 KGLCRAERWEDAGELITEMVRK---DCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKY 356

Query: 254 NINPNVITYNSLICGFC---CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
              P+  TY++LI  F    CV+D  E   L   M      P+ V + +++   C+DG+ 
Sbjct: 357 GRKPDNFTYSALINAFSEQGCVEDALE---LLRSM---PCSPNTVCYKSVLKGLCRDGQW 410

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           + V +L+  M++    PD + +  ++D  C  G +    E+   + + GC  DV  Y  L
Sbjct: 411 EDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSL 470

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +N   +  +V+D++ L++ M     +P+ +TYN +L GL +V    DA KLID+M   + 
Sbjct: 471 LNGFAEYGRVDDSLKLFKSM---TCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQEC 527

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            P+  TF+  I  LC+ G V  A+ VF+ ++   C   +  Y+ L NGL + G +  A K
Sbjct: 528 PPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALK 587

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL---- 546
           L + +  K    D +  S+ +  LC+    + A +L+++M  K+C P EVTF  ++    
Sbjct: 588 LLNNMSCKA---DTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLC 644

Query: 547 -RGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
            +GFV+   +   ++L ++     ++ S L
Sbjct: 645 QQGFVEYATEVSDLMLKYECTPNIVIYSSL 674



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 217/446 (48%), Gaps = 20/446 (4%)

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           ++G    A  ++G +      P  V    LI  LCA GR+ +A  + +         + V
Sbjct: 73  RLGDLDAALQLVGSMSEP---PAVVPCTLLIKKLCAAGRLADAEGVLRASEAA----DAV 125

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
             NTL+ G CR       L   E M+    A    DVVTYN++I G C+ G ++ A+ L+
Sbjct: 126 DHNTLVAGYCRAGR----LADAERMLRSLAASGAADVVTYNTLIAGYCRGGRLEDARLLV 181

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M      PN   YN+L+ G C    W +A+ L  EM  N   PD +TF  +I+  C+ 
Sbjct: 182 ASMPPA---PNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQS 238

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D+   +L+ M + G  P  + YN ++  F  +GR+  A  LF  M    C+ D++SY
Sbjct: 239 GLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMP---CKPDIFSY 295

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N ++   C+ ++ EDA  L  EM+ +   P  +T+NT++S L   G +  AL+++D+M  
Sbjct: 296 NAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPK 355

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
               PD+FT++  I+   + G V +A+++   +R+  C      Y  ++ GLC+ G+ + 
Sbjct: 356 YGRKPDNFTYSALINAFSEQGCVEDALEL---LRSMPCSPNTVCYKSVLKGLCRDGQWED 412

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
             +L   +      PD +    +I  LC+ G +D   ++L ++    C P  V + +LL 
Sbjct: 413 VGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLN 472

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVS 573
           GF +  +    + L   M  +   V+
Sbjct: 473 GFAEYGRVDDSLKLFKSMTCKPNTVT 498



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 139/564 (24%), Positives = 248/564 (43%), Gaps = 59/564 (10%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFF------DCMIK----MKPSPGMTSFTILLTMLAKN 94
            + ++++N R       +N+ ++ F      D  ++    M   P +   T+L+  L   
Sbjct: 47  AATSRWVNPRVPPRRGAANDRLHHFIRLGDLDAALQLVGSMSEPPAVVPCTLLIKKLCAA 106

Query: 95  KQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTF 154
            +      + +   +     D    N L+   C+ G  + A  +L R L +    + VT+
Sbjct: 107 GRLADAEGVLRASEAA----DAVDHNTLVAGYCRAGRLADAERML-RSLAASGAADVVTY 161

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N LI G C  GR+ +A  L   +      PN   +NTL+ GLC  +    A +L EEM  
Sbjct: 162 NTLIAGYCRGGRLEDARLLVASMPPA---PNSYAYNTLLKGLCSAKQWGDAEELVEEMTR 218

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC------- 267
                  PD +T+  +I   C+ G VD+A  +L +M      P  I YN +I        
Sbjct: 219 NDS---PPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGR 275

Query: 268 -------------------------GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
                                    G C  + W++A  L  EM+     PD VTFN +I+
Sbjct: 276 VKEALHLFSCMPCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVIS 335

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           + C  G +D    +++ M + G  PD  TY++L++ F   G +  A EL  SM    C  
Sbjct: 336 FLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMP---CSP 392

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +   Y  ++   C+D + ED   L  EM+     P  + +  ++  L Q G +   L+++
Sbjct: 393 NTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVL 452

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            ++      PD   + + ++G  + G V +++++F+++    C+    TYN ++ GLCK+
Sbjct: 453 QEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSM---TCKPNTVTYNYVLMGLCKV 509

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
              + A KL   +  +   P+ +T S +I  LC++G ++ A D+   M+   C P+ + +
Sbjct: 510 ELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIY 569

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMA 566
            TL  G  +       + LL+ M+
Sbjct: 570 STLNNGLSEKGCVDNALKLLNNMS 593



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 181/387 (46%), Gaps = 43/387 (11%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++   SP   +F  +++ L      D  + +  ++   G  PD F  + LIN   + G 
Sbjct: 318 MVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGC 377

Query: 132 TSGAFVVLGRILRSCF-TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
              A      +LRS   +PNTV +  ++ GLC +G+  +  +L  ++    C P+ + F 
Sbjct: 378 VEDAL----ELLRSMPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFG 433

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
            +I+ LC+       L++ +E+ N +G  C PDVV Y S+++G  + G VD + +L   M
Sbjct: 434 LIIDCLCQRGLVDCGLEVLQEVPN-YG--CSPDVVMYTSLLNGFAEYGRVDDSLKLFKSM 490

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
                 PN +TYN ++ G C V+ W++A  L  EM+     P+ +TF+ +I+  C+ G +
Sbjct: 491 ---TCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLV 547

Query: 311 DKVNRLLELMIQRGVNP--------------------------------DTVTYNSLMDG 338
           +    + E M   G  P                                DT+ Y+S + G
Sbjct: 548 ECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNMSCKADTICYSSALKG 607

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C       A EL V M  K C  D  +++I+I   C+   VE A  +   ML     P+
Sbjct: 608 LCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPN 667

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKM 425
           ++ Y++L++G  + G+L DALKL+  M
Sbjct: 668 IVIYSSLINGFSEHGHLEDALKLLRSM 694



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 127/252 (50%), Gaps = 12/252 (4%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP +  +T LL   A+  + D  + LFK +      P+    N ++  LCK+ +   A  
Sbjct: 461 SPDVVMYTSLLNGFAEYGRVDDSLKLFKSMTCK---PNTVTYNYVLMGLCKVELWEDAGK 517

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           ++  ++     PN +TF+ LI+ LC +G +  A  +F+K+ ++ C PNV+ ++TL NGL 
Sbjct: 518 LIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLS 577

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                  ALKL   M       CK D + Y+S + GLC+    + A EL+++M  ++  P
Sbjct: 578 EKGCVDNALKLLNNMS------CKADTICYSSALKGLCRAELWEDAGELIVEMFRKDCPP 631

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + +T++ +I   C     + A  +   M+     P++V ++++IN   + G ++   +LL
Sbjct: 632 DEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLL 691

Query: 318 ELMIQRGVNPDT 329
             M      PDT
Sbjct: 692 RSM---PCEPDT 700


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 264/533 (49%), Gaps = 12/533 (2%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           L + +  D ++ A  L   H S  +  +      D +     SP       +L  L   +
Sbjct: 2   LDAGYPSDSSTFAVVLRGLHASAKL-RHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
              T ++LF ++   G        NL I+ LCK  +   A  +L  +      P T+  N
Sbjct: 61  DTTTAMALFDKMAELGAVNHTTYYNL-IHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I GLC  GR+  A  +++++N  A  P+ +T+  L++GL +      A+++ +EMV+ 
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVS- 177

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
             A   PD  T   ++  LC    VD A+EL+ +M  R +  N ITY++L+ G C  +  
Sbjct: 178 --ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 235

Query: 276 KEAKCLFI-EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
            EA  L + E+   G  PD+VT++ +I+  CK G++     + E M      P  +TYNS
Sbjct: 236 DEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNS 292

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L+ G+C  G +  A  L   MV   C  DV +Y  L++A CK  +++DA  L+++M++ +
Sbjct: 293 LIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANK 352

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           + P V+T+ +L+ GL   G + DAL+L++++      P  +T+   +DG CK+  V +A 
Sbjct: 353 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAE 412

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK-GPIP-DVVTCSTMIH 512
           ++    R+        TYN L+ G C+ GR   A +   +L  + GP P  V   + ++ 
Sbjct: 413 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 472

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            LC++G+ D A     +M  +  VP+  TF T++    + ++  +   LL +M
Sbjct: 473 ALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 525



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 249/511 (48%), Gaps = 11/511 (2%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           PS   T   +L  + A  K       L   +   GL PD   LN ++  LC    T+ A 
Sbjct: 7   PSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAM 66

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  ++       +T  +N LI+ LC    + EA  L   +     +P  +  N +I GL
Sbjct: 67  ALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGL 125

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR      AL ++ +M +       PD +TY  ++ GL K G +  A ++L +M      
Sbjct: 126 CRAGRLRHALGVYRQMNDAH----PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHV 181

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK-VNR 315
           P+  T   ++   C  D   +A+ L  EM+  G+  + +T++A+++  CK  ++D+ V  
Sbjct: 182 PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVAL 241

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           LL  + +RG  PD VTY++++DG C  GR+  A ++F  M    C     +YN LI   C
Sbjct: 242 LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYC 298

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           +   +++A+ L  +M+ +   P VITY TL+S   ++G L DA +L  +M  N + PD  
Sbjct: 299 RAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 358

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           TF + +DGLC  G + +A+++ + I    C   I TYNC+++G CK  +++ A +L    
Sbjct: 359 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADF 418

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL--LDMEAKNCVPSEVTFCTLLRGFVQNN 553
           + +G +P+ VT + ++   C+ G+ D+A   L  L+ E   C  S   +  +L    ++ 
Sbjct: 419 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 478

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           +    V    +M     V +  + ++ V  L
Sbjct: 479 RTDDAVQFYEEMIQRGYVPAAATFATVVFAL 509



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 230/452 (50%), Gaps = 12/452 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG     +++  L +  +    + +++++N +   PD      L++ L K G    A  V
Sbjct: 113 PGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQV 171

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  ++ +   P+  T   ++  LC   R+ +A  L +++       N +T++ L++GLC+
Sbjct: 172 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 231

Query: 199 TR--NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
               +  VAL L E     F     PD+VTY+++IDGLCK G +  A ++  +M   +  
Sbjct: 232 CERLDEAVALLLGEVTRRGF----TPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCA 284

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P  ITYNSLI G+C   D  EA  L  +M+D+   PDV+T+  +++  CK G++D    L
Sbjct: 285 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYEL 344

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
            + M+   ++PD VT+ SL+DG C  GR+  A EL   +  +GC   +Y+YN +++  CK
Sbjct: 345 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 404

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSF 435
             +V  A  L  +  S    P+ +TYN L++G  + G    AL+ +D++       P S 
Sbjct: 405 SNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSV 464

Query: 436 T-FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             +A  +D LC++G   +AVQ ++ +          T+  ++  LCK  + + A +L   
Sbjct: 465 AMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEE 524

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           +   G  P   TC  ++   C+ G + KA++L
Sbjct: 525 MIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 221/429 (51%), Gaps = 11/429 (2%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           ++  H  D  +  K ++   K+G +   +AV     M+  +  P  T+ T+++  L    
Sbjct: 141 MNDAHPPDFLTYTKLVHGLSKAGRL--RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGD 198

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK-MGITSGAFVVLGRILRSCFTPNTVTF 154
           + D    L + +   G+  +    + L++ LCK   +     ++LG + R  FTP+ VT+
Sbjct: 199 RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTY 258

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           + +I+GLC  GR+ +A  +F++++   C P  +T+N+LI G CR  +   A++L  +MV+
Sbjct: 259 STVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 315

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
           +    C PDV+TY +++   CK G +D A EL  QM    ++P+V+T+ SL+ G C    
Sbjct: 316 DN---CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 372

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
            ++A  L  E+   G  P + T+N +++  CK  ++ K   L+     RG  P+TVTYN 
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNI 432

Query: 335 LMDGFCLVGRISRARELFVSMVSKG--CRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           L+ G C  GR  +A +    + S+G  C   V  Y I+++A C+D + +DAV  Y EM+ 
Sbjct: 433 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 492

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
               P+  T+ T++  L +      A +L+++M      P   T    +   C+ G + +
Sbjct: 493 RGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQK 552

Query: 453 AVQVFQAIR 461
           A ++   +R
Sbjct: 553 ADELASELR 561



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 250/498 (50%), Gaps = 44/498 (8%)

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIME-AARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           +L + +  ++ TF  ++ GL A  ++      L  ++      P+ V  NT++  LC  R
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           +T  A+ LF++M  E GA+   +  TY ++I  LCK   +D+A  LLL MK R +NP  +
Sbjct: 61  DTTTAMALFDKMA-ELGAV---NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTL 116

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMD-----------------------NGVQ------ 291
            +N +I G C     + A  ++ +M D                       + VQ      
Sbjct: 117 LHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMV 176

Query: 292 -----PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
                PD  T   ++   C   ++D    L+E M+ RG+  + +TY++L+DG C   R+ 
Sbjct: 177 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 236

Query: 347 RARELFVSMVSK-GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
            A  L +  V++ G   D+ +Y+ +I+  CK  ++ DAV ++ EM      P+ ITYN+L
Sbjct: 237 EAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSL 293

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + G  + G++ +A++L+ KM  ++  PD  T+ T +   CK G + +A ++FQ +   K 
Sbjct: 294 IGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKL 353

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
              + T+  L++GLC  GR++ A +L   +  +G  P + T + ++   CK  Q+ KA +
Sbjct: 354 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEE 413

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE-KLVVSDLSLSSKVVDL 584
           L+ D  ++  VP+ VT+  L+ G  +  +  + +  L ++ +E     + +++ + ++D 
Sbjct: 414 LVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDA 473

Query: 585 LSKDKKYRECLNQFRHLL 602
           L +D +  + +  +  ++
Sbjct: 474 LCRDGRTDDAVQFYEEMI 491



 Score = 42.4 bits (98), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 4/122 (3%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTS---FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           +++A+ + D  +  +  P  TS   + I+L  L ++ + D  V  ++ +   G  P    
Sbjct: 443 TDQALQYLD-QLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAAT 501

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
              ++  LCK      A  +L  +++   TP   T + +++  C  G I +A  L  +L 
Sbjct: 502 FATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561

Query: 179 VF 180
           ++
Sbjct: 562 LY 563


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/459 (32%), Positives = 233/459 (50%), Gaps = 12/459 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTS--FTILLTMLAKNKQYDTVVSLFKRL 107
           FL+   KSG I        F+    M+ S   +   + +L+ +L ++ + D        +
Sbjct: 311 FLSGLCKSGKIEQA-----FEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEI 365

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
               + P     + +I  LCK G    A  +L  +++  + P+  T + LIN LC   +I
Sbjct: 366 AGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKI 425

Query: 168 MEAARLFKKLN--VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
            EA    + ++  + +   +  ++N+L+N LC+ +    A  +F  MV+E   +  PDVV
Sbjct: 426 QEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFV--PDVV 483

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           +Y+ +IDG CK   + +A++L  QM D N  PNV TYN+ + G        +A+ ++ EM
Sbjct: 484 SYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM 543

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           +  G  PDV+T++ +I+      K D+ + L E MI RG  P+ VTYN L+ G C   + 
Sbjct: 544 VAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKP 603

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A ELF  MV +GC  D  +Y  L+   C   K+E AV ++ EM+S+   P V+ YN L
Sbjct: 604 DEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 663

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCK 464
           L G F+ G  G+A +L   M      PD+ +    IDGL K   + +AV+VF+ + ++  
Sbjct: 664 LKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHG 723

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           C   + TYN LI GLC   RL  A K+F  +      PD
Sbjct: 724 CSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 762



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 251/525 (47%), Gaps = 44/525 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP-DLFVLNLL 122
           EA   F  M+K    P  T ++ ++    K +  D    LF  +      P +       
Sbjct: 252 EASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAF 311

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LCK G    AF    R ++   + +   ++ LI  L   GRI +A     ++     
Sbjct: 312 LSGLCKSGKIEQAFEAC-RTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNI 370

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  T +++I  LC+      AL L E M+      C PD+ T++ +I+ LCK   + +
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKR--GYC-PDMATHSMLINELCKADKIQE 427

Query: 243 AKELLLQM--------------------------------------KDRNINPNVITYNS 264
           A+E L  M                                       +R+  P+V++Y+ 
Sbjct: 428 AQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSI 487

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI GFC +D+   A+ L+ +M+D    P+V T+NA +N   + G++     + E M+  G
Sbjct: 488 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG 547

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
            +PD +TY++L+ GF L  +  +A ELF +M+S+GCR +  +YN L++  CK+ K ++A 
Sbjct: 548 CSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAH 607

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+R+M+     P  +TY TLL G   VG +  A+++ D+M      PD   +   + G 
Sbjct: 608 ELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGF 667

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL-QHKGPIPD 503
            + G   EA Q+FQ + + +C+    ++N +I+GL K  RL  A ++F R+ Q  G  PD
Sbjct: 668 FRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPD 727

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           +VT +++I  LC E ++ +A  +  +++     P    F  LL  
Sbjct: 728 LVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 231/428 (53%), Gaps = 9/428 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +SG I   E          ++PS G     I    L K  + D+ +SL + +   G  PD
Sbjct: 351 ESGRIDKAEEACLEIAGRNIQPSSGTCHSVI--QELCKAGRVDSALSLLETMIKRGYCPD 408

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVT--FNFLINGLCAEGRIMEAARL 173
           +   ++LIN LCK      A   L  + R   + ++    +N L+N LC   ++ +A  +
Sbjct: 409 MATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAI 468

Query: 174 FKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           F  + +  +  P+VV+++ LI+G C+      A KL+++M++     C P+V TYN+ ++
Sbjct: 469 FSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMID---LNCVPNVTTYNAFLN 525

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           GL + G +  A+ +  +M     +P+VITY++LI GF       +A  LF  M+  G +P
Sbjct: 526 GLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRP 585

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           + VT+N +++  CK+ K D+ + L   M++RG +PD VTY +L+ GFC VG+I +A E+F
Sbjct: 586 NAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVF 645

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             MVSKG   DV +YN L+    +  K  +A  L++ M+S + +P  +++N ++ GL + 
Sbjct: 646 DEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKA 705

Query: 413 GNLGDALKLIDKM-QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
             L DA+++ ++M Q +   PD  T+ + I GLC    + EA++VF+ I   K       
Sbjct: 706 KRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHA 765

Query: 472 YNCLINGL 479
           +N L+  +
Sbjct: 766 FNVLLEAI 773



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 207/401 (51%), Gaps = 10/401 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN--GLF 113
           K+G + S  A+   + MIK    P M + ++L+  L K  +        + ++       
Sbjct: 386 KAGRVDS--ALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRS 443

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
              F  N L+N LCK      AF +   ++    F P+ V+++ LI+G C    +  A +
Sbjct: 444 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEK 503

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           L+K++    C PNV T+N  +NGL R      A  ++EEMV    A C PDV+TY+++I 
Sbjct: 504 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMV---AAGCSPDVITYSTLIH 560

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G       D+A EL   M  R   PN +TYN L+ G C      EA  LF +M++ G  P
Sbjct: 561 GFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDP 620

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D VT+  ++   C  GK+++   + + M+ +G +PD V YN L+ GF   G+   A++LF
Sbjct: 621 DRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLF 680

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVITYNTLLSGLFQ 411
             MVS+ C+ D  S+NI+I+   K ++++DAV ++  M  +    P ++TYN+L+ GL  
Sbjct: 681 QVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCG 740

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
              L +A+K+  ++    + PD   F   ++ + K G V +
Sbjct: 741 EQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI-KCGIVYQ 780



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 245/509 (48%), Gaps = 6/509 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A   F+ M+     P   ++ +L+      +  D  V  F  +   G  P   +   +
Sbjct: 146 KQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKV 205

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
             CL   G       V GR L        +    L+     + + +EA++LF+ +    C
Sbjct: 206 TECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGC 265

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+   ++ ++   C+  N   A KLF EM  E  A    + V + + + GLCK G +++
Sbjct: 266 KPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPL--NNVAWTAFLSGLCKSGKIEQ 323

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E    M++ +++ +   Y+ LI          +A+   +E+    +QP   T +++I 
Sbjct: 324 AFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQ 382

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK--GC 360
             CK G++D    LLE MI+RG  PD  T++ L++  C   +I  A+E    M  K    
Sbjct: 383 ELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSR 442

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVITYNTLLSGLFQVGNLGDAL 419
               +SYN L+N+ CK +KV  A  ++  M+SER   P V++Y+ L+ G  ++  LG A 
Sbjct: 443 SSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAE 502

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           KL  +M   + VP+  T+  +++GL + G + +A  V++ +    C   + TY+ LI+G 
Sbjct: 503 KLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGF 562

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
               +   A +LF  +  +G  P+ VT + ++H LCKE + D+A++L   M  + C P  
Sbjct: 563 SLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDR 622

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           VT+ TLL GF    K  + V +  +M ++
Sbjct: 623 VTYTTLLYGFCNVGKIEQAVEVFDEMVSK 651



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 238/504 (47%), Gaps = 10/504 (1%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP-NTVTFNFLINGL 161
           LF+ +  +G  PD  + + ++   CK+     AF +   +      P N V +   ++GL
Sbjct: 256 LFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGL 315

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  G+I +A    + +         V ++ LI  L  +     A +   E+    G   +
Sbjct: 316 CKSGKIEQAFEACRTMQESLSSSQPV-YDMLIRLLIESGRIDKAEEACLEIA---GRNIQ 371

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P   T +S+I  LCK G VD A  LL  M  R   P++ T++ LI   C  D  +EA+  
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ-E 430

Query: 282 FIEMMDNGVQPDVVT---FNAMINYNCKDGKMDKVNRLLELMI-QRGVNPDTVTYNSLMD 337
           F++ MD  +     +   +N+++N  CK  K+ +   +   M+ +R   PD V+Y+ L+D
Sbjct: 431 FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILID 490

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           GFC +  + RA +L+  M+   C  +V +YN  +N   +  ++ DA  +Y EM++    P
Sbjct: 491 GFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSP 550

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            VITY+TL+ G         A +L + M      P++ T+   + GLCK     EA ++F
Sbjct: 551 DVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 610

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +    C+    TY  L+ G C +G+++ A ++F  +  KG  PDVV  + ++    + 
Sbjct: 611 RKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 670

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G+  +A  L   M ++ C P  V+   ++ G  +  +    V +  +M  +     DL  
Sbjct: 671 GKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVT 730

Query: 578 SSKVVDLLSKDKKYRECLNQFRHL 601
            + ++  L  +++  E +  F+ +
Sbjct: 731 YNSLIFGLCGEQRLSEAMKVFKEI 754



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 173/366 (47%), Gaps = 4/366 (1%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           K DV TYN ++D L +   + +A ++  +M  + + PN  TY  L+   C   +  EA  
Sbjct: 126 KHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVR 185

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            F EM+D G +P    +  +       GK  + +R+    +++ V  + +   +L+  F 
Sbjct: 186 FFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFV 245

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP-SV 399
           +  +   A +LF +MV  GC+ D   Y+ ++ A+CK + +++A  L+ EM  E   P + 
Sbjct: 246 IQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNN 305

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           + +   LSGL + G +  A +    MQ   +      +   I  L ++G + +A +    
Sbjct: 306 VAWTAFLSGLCKSGKIEQAFEACRTMQ-ESLSSSQPVYDMLIRLLIESGRIDKAEEACLE 364

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           I     +    T + +I  LCK GR+ +A  L   +  +G  PD+ T S +I+ LCK  +
Sbjct: 365 IAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADK 424

Query: 520 MDKANDLLLDMEAK--NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           + +A + L  M+ K  +   S  ++ +LL    +  K  +   +   M +E+  V D+  
Sbjct: 425 IQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVS 484

Query: 578 SSKVVD 583
            S ++D
Sbjct: 485 YSILID 490



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 133/331 (40%), Gaps = 43/331 (12%)

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           D  EA   F  +     + DV T+N +++   +   + +  ++ E M+ +GV P+  TY 
Sbjct: 109 DGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYA 168

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN------------------------- 368
            L+   C       A   F  MV KG +     Y                          
Sbjct: 169 VLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEK 228

Query: 369 -----------ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
                      +L+N   +D+ +E A  L+R M+    +P    Y+ ++    ++ NL +
Sbjct: 229 RVAVEMMLKKALLVNFVIQDKAIE-ASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDE 287

Query: 418 ALKLIDKMQLNDVVP-DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE--TYNC 474
           A KL  +M +    P ++  +  ++ GLCK+G +    Q F+A R  +  L      Y+ 
Sbjct: 288 AFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKI---EQAFEACRTMQESLSSSQPVYDM 344

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI  L + GR+  A +    +  +   P   TC ++I  LCK G++D A  LL  M  + 
Sbjct: 345 LIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 404

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             P   T   L+    + +K  +    L  M
Sbjct: 405 YCPDMATHSMLINELCKADKIQEAQEFLQGM 435



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 91/240 (37%), Gaps = 42/240 (17%)

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           +A+  +R + +   +  V TYN LL  L +  +L  A ++ +KM    VVP+ FT+A  +
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 442 DGLCKNGFVLEAVQVF---------------QAIRNC--------------------KCE 466
              C      EAV+ F               Q +  C                    +  
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           + +     L+       +   A KLF  +   G  PD    S M+   CK   +D+A  L
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291

Query: 527 LLDMEAKNCVP-SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
            L+M  ++  P + V +   L G  ++ K      +     A + +   LS S  V D+L
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGK------IEQAFEACRTMQESLSSSQPVYDML 345



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 3/154 (1%)

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T    I  L   G  L   +  QA RN K +  + TYNCL++ L +   LK A ++F ++
Sbjct: 99  TVGAVIKHLRDGGEALTFFRWLQA-RNFKHD--VFTYNCLLDKLIRHRDLKQAGQVFEKM 155

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
             +G +P+  T + ++   C E   D+A     +M  K   PS   +  +        K+
Sbjct: 156 VAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKE 215

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
            +   +  +   +++ V  +   + +V+ + +DK
Sbjct: 216 GEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDK 249


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 239/470 (50%), Gaps = 4/470 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +++ ++  L K  + +    + + + + G  PD+F  N ++    +      A  V   +
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           + S + P+ V+++ LI+GL   G++ E+ ++  ++ +    P++  +++L+  L + R  
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A  LF+EM+        PD + +  +I GLC+ G V  A E   QM      PNV  Y
Sbjct: 132 DHASSLFDEMIR---GGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N L+ G C     ++A  LF EM  +   PDVVT+N +++  CK  ++++  +L E M  
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G  P+ +T+++L+ G C  G + +A E+F SM+  GC+ + Y+Y  LI+  C+ +KV  
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN-DVVPDSFTFATYI 441
           A  L+ +M    I P  + YN+L++G  + G++ +A KL  +M     + P   TF T I
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DG CK G +  A ++   +          TY  LI GL +  +L  A +++ +++ K  +
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFL 428

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            D V+C + +  LCK G +D+A  +         VP+  TF  L    ++
Sbjct: 429 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIK 478



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 228/436 (52%), Gaps = 4/436 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           N  T++ +I  L  E +  E+ ++ +++    C+P+V  FN ++ G  R+ N   A +++
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           + MV E G   KPD V+Y+ +I GL K G +D++ ++L +M  R   P++  Y+SL+   
Sbjct: 69  QHMV-ESGY--KPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
                   A  LF EM+  G  PD + F  +I   C+ GK+   +   + M + G  P+ 
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
             YN L+ G C  G++ +A  LF  M S  C  DV +YN L++A CK ++VE+   L+  
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M +    P+VIT++TL+ GL + G L  AL++   M      P+ +T+ T I GLC+   
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH-KGPIPDVVTCS 508
           V++A ++F+ +           YN LI G CK G +  A KL+  +    G  P +VT +
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I   CK G++ +AN+L+ +M  K       T+  L+ G  +  K  + + +  +M  +
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425

Query: 569 KLVVSDLSLSSKVVDL 584
           K ++  +S  S V  L
Sbjct: 426 KFLLDPVSCVSFVGGL 441



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 217/400 (54%), Gaps = 4/400 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E++     M+    +P M +++ L+  LAK ++ D   SLF  +   G  PD  +   L
Sbjct: 97  DESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYEL 156

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  LC+ G    A     ++ +    PN   +N L++GLC+ G++ +A  LF ++   +C
Sbjct: 157 ILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSC 216

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VVT+NTL++ +C+ R      KLFE M     A   P+V+T++++I GLC+ G ++K
Sbjct: 217 SPDVVTYNTLLDAVCKARRVEEGCKLFEAMR---AAGYVPNVITFSTLIHGLCRTGELEK 273

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+   M +    PN  TY +LI G C  +   +A+ LF +M    + PD V +N++I 
Sbjct: 274 ALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 333

Query: 303 YNCKDGKMDKVNRLL-ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
             CK G MD+  +L  E+    G+ P  VT+N+L+DGFC +G++ RA EL   M +KG  
Sbjct: 334 GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLA 393

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +Y ILI    +  K+++A+ +Y++M  ++     ++  + + GL + GN+  A  +
Sbjct: 394 ADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAV 453

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
            +  + +  VP+  TF    + L K G V +A ++ +  +
Sbjct: 454 FEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 493



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 243/473 (51%), Gaps = 4/473 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            E+    + M+    +P + +F  ++   A++   +    +++ +  +G  PD    ++L
Sbjct: 27  EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 86

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K+G    +  +L  ++    TP+   ++ L+  L    R+  A+ LF ++     
Sbjct: 87  IHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGH 146

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ + F  LI GLC+      A + F++M       C+P+V  YN ++ GLC  G +++
Sbjct: 147 HPDRLMFYELILGLCQAGKVKDASERFKQMPKHG---CQPNVPVYNVLLHGLCSSGQLEQ 203

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  L  +MK  + +P+V+TYN+L+   C     +E   LF  M   G  P+V+TF+ +I+
Sbjct: 204 ANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIH 263

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ G+++K   +   M++ G  P+  TY +L+ G C   ++ +ARELF  M       
Sbjct: 264 GLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPP 323

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKL 421
           D  +YN LI   CK   +++A  LYREM     ++P+++T+NTL+ G  ++G LG A +L
Sbjct: 324 DAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 383

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           + +M    +  DS T+   I GL +   + EA++V++ +R  K  L   +    + GLCK
Sbjct: 384 VAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 443

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
            G +  A  +F   +  G +P+  T   +   L K G+++ A  L+   +A++
Sbjct: 444 TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 496



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 224/439 (51%), Gaps = 6/439 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +S N+     VY    M++    P   S+ IL+  LAK  + D  + +   +   G  P 
Sbjct: 57  RSNNMEKAREVY--QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPS 114

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   + L+  L K      A  +   ++R    P+ + F  LI GLC  G++ +A+  FK
Sbjct: 115 MQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFK 174

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++    C PNV  +N L++GLC +     A  LF EM +     C PDVVTYN+++D +C
Sbjct: 175 QMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHS---CSPDVVTYNTLLDAVC 231

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   V++  +L   M+     PNVIT+++LI G C   + ++A  +F  M++ G +P+  
Sbjct: 232 KARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKY 291

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+  C+  K+ +   L E M Q  + PD V YNSL+ G+C  G +  A +L+  M
Sbjct: 292 TYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351

Query: 356 V-SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
               G +  + ++N LI+  CK  K+  A  L  EM ++ +     TY  L++GL +   
Sbjct: 352 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATK 411

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +AL++  +M+    + D  +  +++ GLCK G + +A  VF+A R        ET+  
Sbjct: 412 LDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRI 471

Query: 475 LINGLCKMGRLKTACKLFH 493
           L   L K+GR++ A KL  
Sbjct: 472 LSESLIKLGRVEDAQKLME 490



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 221/419 (52%), Gaps = 13/419 (3%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           NV T++++I  L +      + K+ EEM+    A C PDV  +N ++ G  +   ++KA+
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMM---AAGCNPDVFAFNGVMQGFARSNNMEKAR 65

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E+   M +    P+ ++Y+ LI G   +    E+  +  EM+  G  P +  +++++   
Sbjct: 66  EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K  ++D  + L + MI+ G +PD + +  L+ G C  G++  A E F  M   GC+ +V
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             YN+L++  C   ++E A  L+ EM S    P V+TYNTLL  + +   + +  KL + 
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+    VP+  TF+T I GLC+ G + +A++VF ++    C+    TY  LI+GLC+  +
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFC 543
           +  A +LF ++      PD V  +++I   CK G MD+A  L  +M     + P+ VTF 
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAE---------KLVVSDLSLSSKVVDLLSKDKKYRE 593
           TL+ GF +  K  +   L+ +M  +         +++++ LS ++K+ + L   K+ RE
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMRE 424



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 188/370 (50%), Gaps = 4/370 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A   FD MI+    P    F  L+  L +  +       FK++  +G  P++ V N+L
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LC  G    A  +   +     +P+ VT+N L++ +C   R+ E  +LF+ +     
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV+TF+TLI+GLCRT     AL++F  M+    A CKP+  TY ++I GLC+   V +
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLE---AGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMI 301
           A+EL  +M    I P+ + YNSLI G+C      EA+ L+ EM    G+QP +VTFN +I
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK GK+ + N L+  M  +G+  D+ TY  L+ G     ++  A E++  M  K   
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFL 428

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  S    +   CK   ++ A  ++         P+  T+  L   L ++G + DA KL
Sbjct: 429 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 488

Query: 422 IDKMQLNDVV 431
           ++  +  D+ 
Sbjct: 489 MEPAKARDIT 498



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 156/316 (49%), Gaps = 35/316 (11%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M D  +  +V T++++I    K+ K ++  ++LE M+  G NPD   +N +M GF     
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           + +ARE++  MV  G + D  SY+ILI+   K  K+++++ +  EM+     PS+  Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+  L +   +  A  L D+M      PD   F   I GLC+ G V +A + F+ +    
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 465 CELRIETYNCLINGLCKMGRLKTA-----------------------------------C 489
           C+  +  YN L++GLC  G+L+ A                                   C
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           KLF  ++  G +P+V+T ST+IH LC+ G+++KA ++   M    C P++ T+ TL+ G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 550 VQNNKKSKVVVLLHKM 565
            +  K  +   L  KM
Sbjct: 301 CRAEKVIQARELFEKM 316



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 58/132 (43%), Gaps = 1/132 (0%)

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY+ +I  L K  + + + K+   +   G  PDV   + ++    +   M+KA ++   M
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
                 P  V++  L+ G  +  K  + + +L +M       S  + SS +V  L+K ++
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS-LVRALAKARR 130

Query: 591 YRECLNQFRHLL 602
                + F  ++
Sbjct: 131 VDHASSLFDEMI 142


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 153/530 (28%), Positives = 264/530 (49%), Gaps = 45/530 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  MI     P M +++ L+  L + +   T++ L + + + GL P+++   + I
Sbjct: 210 EALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICI 269

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L + G    A+ +L  +      P+ VT+  LI+ LCA G++ +A  L+ K+   +  
Sbjct: 270 RVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHK 329

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++VT+ TL++      +     + + EM  +  A   PDVVTY  +++ LCK G VD+A
Sbjct: 330 PDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYA---PDVVTYTILVEALCKSGKVDQA 386

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ++L  M+ R I PN+ TYN+LI G   +    EA  LF  M   GV P   ++   I+Y
Sbjct: 387 FDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDY 446

Query: 304 NCKDGKMDKVNRLLELMIQRGV-----------------------------------NPD 328
             K G  +K     E M +RG+                                   +PD
Sbjct: 447 YGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPD 506

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           +VTYN +M  +   G+I +A +L   M+S+GC  D+   N LI+   K  +V++A  ++ 
Sbjct: 507 SVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFG 566

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            +   ++ P+V+TYN L++GL + G L  AL L   M+ +   P++ TF   +D LCKN 
Sbjct: 567 RLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKND 626

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            V  A+++F  +    C   + TYN +I GL K GR   A   +H+++ K   PD VT  
Sbjct: 627 AVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLY 685

Query: 509 TMIHWLCKEGQMDKANDLLLD------MEAKNCVPSEVTFCTLLRGFVQN 552
           T++  + K+G+++ A  ++++      ++  N V  E+  C L+   ++ 
Sbjct: 686 TLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEE 735



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 233/505 (46%), Gaps = 68/505 (13%)

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K GI    F  LG++ ++ F  N  ++N LI  L   G   EA +++K++      P++ 
Sbjct: 170 KGGIRQAPFA-LGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMK 228

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMV-------------------------NEFGAI--- 219
           T++ L+  L R R+T   + L EEM                          + +G +   
Sbjct: 229 TYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTM 288

Query: 220 ----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
               C PDVVTY  +ID LC  G +DKAKEL  +M+  +  P+++TY +L+  F    D 
Sbjct: 289 EDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDL 348

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           +  K  + EM  +G  PDVVT+  ++   CK GK+D+   +L++M  RG+ P+  TYN+L
Sbjct: 349 ETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTL 408

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           + G   + R+  A ELF +M S G     YSY + I+   K    E A+  + +M    I
Sbjct: 409 ISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGI 468

Query: 396 RPSV-----------------------------------ITYNTLLSGLFQVGNLGDALK 420
            PS+                                   +TYN ++    + G +  A K
Sbjct: 469 MPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATK 528

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L+ +M      PD     + ID L K G V EA Q+F  +++ K    + TYN LI GL 
Sbjct: 529 LLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLG 588

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G+L  A  LF  ++  G  P+ VT + ++  LCK   +D A  +   M   NC P  +
Sbjct: 589 KEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVL 648

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
           T+ T++ G ++  +        H+M
Sbjct: 649 TYNTIIYGLIKEGRAGYAFWFYHQM 673



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 139/553 (25%), Positives = 260/553 (47%), Gaps = 37/553 (6%)

Query: 47   IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR 106
            +   ++  +K+G +  +EA   F  +  +K +P + ++ IL+T L K  +    + LF  
Sbjct: 545  VNSLIDTLYKAGRV--DEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGS 602

Query: 107  LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
            +  +G  P+    N L++CLCK      A  +  R+     +P+ +T+N +I GL  EGR
Sbjct: 603  MKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGR 662

Query: 167  IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG--------- 217
               A   + ++  F   P+ VT  TL+ G+ +      A+K+  E V++ G         
Sbjct: 663  AGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWG 721

Query: 218  --------------AICKPDVVTYNSI----------IDGLCKDGFVDKAKELLLQM-KD 252
                          AI   + +  NSI          I  LCK      AK+L  +  K 
Sbjct: 722  ELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKS 781

Query: 253  RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
               +P   +YN L+ G    +  + A  LF+EM + G  P++ T+N +++ + K  ++D+
Sbjct: 782  LGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDE 841

Query: 313  VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
            +  L   M+ RG  P+ +T+N ++        I++A +L+  ++S        +Y  LI 
Sbjct: 842  LFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIG 901

Query: 373  ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
               K  + E+A+ ++ EM   + +P+   YN L++G  + GN+  A  L  +M    + P
Sbjct: 902  GLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRP 961

Query: 433  DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
            D  ++   ++ L   G V +AV  F+ ++    +    +YN +INGL K  RL+ A  LF
Sbjct: 962  DLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLF 1021

Query: 493  HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
              ++++G  P++ T + +I      G +D+A  +  +++     P+  T+  L+RG  ++
Sbjct: 1022 SEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKS 1081

Query: 553  NKKSKVVVLLHKM 565
              K +   +  KM
Sbjct: 1082 GNKDRAFSVFKKM 1094



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 230/520 (44%), Gaps = 43/520 (8%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            +A+  F  M +    P   +F  LL  L KN   D  + +F R+      PD+   N +I
Sbjct: 595  KALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII 654

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL------ 177
              L K G    AF    + ++   +P+ VT   L+ G+  +GR+ +A ++  +       
Sbjct: 655  YGLIKEGRAGYAFWFYHQ-MKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGL 713

Query: 178  --------------------------------NVFACDPNVVTFNTLINGLCRTRNTLVA 205
                                            N    D N++    LI  LC+ +  L A
Sbjct: 714  QTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLIL--PLIRVLCKQKKALDA 771

Query: 206  LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
             KLF++     G    P+  +YN ++DGL      + A +L ++MK+    PN+ TYN L
Sbjct: 772  KKLFDKFTKSLGTHPTPE--SYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLL 829

Query: 266  ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
            +          E   L+ EM+  G +P+++T N +I+   K   ++K   L   +I    
Sbjct: 830  LDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDF 889

Query: 326  NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            +P   TY  L+ G    GR   A ++F  M    C+ +   YNILIN   K   V  A  
Sbjct: 890  SPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACD 949

Query: 386  LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
            L++ M+ E IRP + +Y  L+  LF  G + DA+   ++++L  + PD+ ++   I+GL 
Sbjct: 950  LFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLG 1009

Query: 446  KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
            K+  + EA+ +F  ++N      + TYN LI      G +  A K+F  LQ  G  P+V 
Sbjct: 1010 KSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVF 1069

Query: 506  TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
            T + +I    K G  D+A  +   M    C P+  TF  L
Sbjct: 1070 TYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 246/545 (45%), Gaps = 15/545 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F+ M K    P + +    L  LA+  +      +F  +++ GL PD    N++
Sbjct: 454 EKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMM 513

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + C  K G    A  +L  +L     P+ +  N LI+ L   GR+ EA ++F +L     
Sbjct: 514 MKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKL 573

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P VVT+N LI GL +    L AL LF  M  E G  C P+ VT+N+++D LCK+  VD 
Sbjct: 574 APTVVTYNILITGLGKEGKLLKALDLFGSM-KESG--CPPNTVTFNALLDCLCKNDAVDL 630

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC----LFIEMMDNGVQPDVVTFN 298
           A ++  +M   N +P+V+TYN++I G       KE +      F   M   + PD VT  
Sbjct: 631 ALKMFCRMTIMNCSPDVLTYNTIIYGLI-----KEGRAGYAFWFYHQMKKFLSPDHVTLY 685

Query: 299 AMINYNCKDGKM-DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
            ++    KDG++ D +  ++E + Q G+      +  LM+   +   I  A      +V 
Sbjct: 686 TLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVC 745

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREML-SERIRPSVITYNTLLSGLFQVGNLG 416
                D      LI   CK +K  DA  L+ +   S    P+  +YN L+ GL       
Sbjct: 746 NSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITE 805

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            ALKL  +M+     P+ FT+   +D   K+  + E  +++  +    C+  I T+N +I
Sbjct: 806 AALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIII 865

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           + L K   +  A  L++ +      P   T   +I  L K G+ ++A  +  +M    C 
Sbjct: 866 SALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCK 925

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           P+   +  L+ GF +    +    L  +M  E  +  DL   + +V+ L    +  + ++
Sbjct: 926 PNCAIYNILINGFGKAGNVNIACDLFKRMIKEG-IRPDLKSYTILVECLFMTGRVDDAVH 984

Query: 597 QFRHL 601
            F  L
Sbjct: 985 YFEEL 989



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 228/498 (45%), Gaps = 41/498 (8%)

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA-------------------RLFKK 176
           F ++ ++     TP T   N+++  L   GR+ + A                    +FK 
Sbjct: 109 FKMVSQLPNIVHTPETC--NYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKA 166

Query: 177 LNV--------FACDP--------NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
           L++        FA           N  ++N LI  L +      ALK+++ M++E     
Sbjct: 167 LSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEG---L 223

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           KP + TY++++  L +        +LL +M+   + PN+ TY   I          +A  
Sbjct: 224 KPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYG 283

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +   M D G  PDVVT+  +I+  C  GK+DK   L   M      PD VTY +LM  F 
Sbjct: 284 ILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFG 343

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G +   +  +  M + G   DV +Y IL+ A CK  KV+ A  +   M    I P++ 
Sbjct: 344 NYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLH 403

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYNTL+SGL  +  L +AL+L + M+   V P ++++  +ID   K G   +A+  F+ +
Sbjct: 404 TYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKM 463

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           +       I   N  +  L +MGR++ A  +F+ + + G  PD VT + M+    K GQ+
Sbjct: 464 KKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQI 523

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           DKA  LL +M ++ C P  +   +L+    +  +  +   +  ++   KL  + ++ +  
Sbjct: 524 DKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNIL 583

Query: 581 VVDLLSKDKKYRECLNQF 598
           +   L K+ K  + L+ F
Sbjct: 584 ITG-LGKEGKLLKALDLF 600



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 186/383 (48%), Gaps = 4/383 (1%)

Query: 96   QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT-PNTVTF 154
            + +  +S  + L  N +  D  ++  LI  LCK      A  +  +  +S  T P   ++
Sbjct: 732  EIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESY 791

Query: 155  NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
            N L++GL        A +LF ++    C PN+ T+N L++   +++      +L+ EM+ 
Sbjct: 792  NCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLC 851

Query: 215  EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                 CKP+++T+N II  L K   ++KA +L  ++   + +P   TY  LI G      
Sbjct: 852  RG---CKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGR 908

Query: 275  WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
             +EA  +F EM D   +P+   +N +IN   K G ++    L + MI+ G+ PD  +Y  
Sbjct: 909  SEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTI 968

Query: 335  LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
            L++   + GR+  A   F  +   G   D  SYN++IN   K +++E+A+ L+ EM +  
Sbjct: 969  LVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRG 1028

Query: 395  IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
            I P + TYN L+      G +  A K+ +++Q   + P+ FT+   I G  K+G    A 
Sbjct: 1029 ISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAF 1088

Query: 455  QVFQAIRNCKCELRIETYNCLIN 477
             VF+ +    C     T+  L N
Sbjct: 1089 SVFKKMMIVGCSPNAGTFAQLPN 1111



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 166/350 (47%), Gaps = 42/350 (12%)

Query: 292 PDVV----TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           P++V    T N M+ +    G+++ +  + +LM ++ +N +  TY ++     + G I +
Sbjct: 116 PNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQ 175

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A      M   G   + YSYN LI    +    ++A+ +Y+ M+SE ++PS+ TY+ L+ 
Sbjct: 176 APFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMV 235

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
            L +  + G  + L+++M+   + P+ +T+   I  L + G + +A  + + + +  C  
Sbjct: 236 ALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGP 295

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQ---HK-------------------------- 498
            + TY  LI+ LC  G+L  A +L+ +++   HK                          
Sbjct: 296 DVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFW 355

Query: 499 ------GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
                 G  PDVVT + ++  LCK G++D+A D+L  M  +  VP+  T+ TL+ G +  
Sbjct: 356 SEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNL 415

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKV-VDLLSKDKKYRECLNQFRHL 601
            +  + + L + M  E L V+  + S  + +D   K     + L+ F  +
Sbjct: 416 RRLDEALELFNNM--ESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKM 463



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 3/240 (1%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            N+A+  +  +I    SP   ++  L+  L K  + +  + +F+ +      P+  + N+L
Sbjct: 875  NKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNIL 934

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            IN   K G  + A  +  R+++    P+  ++  L+  L   GR+ +A   F++L +   
Sbjct: 935  INGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGL 994

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            DP+ V++N +INGL ++R    AL LF EM N       P++ TYN++I      G VD+
Sbjct: 995  DPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRG---ISPELYTYNALILHFGNAGMVDQ 1051

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            A ++  +++   + PNV TYN+LI G     +   A  +F +MM  G  P+  TF  + N
Sbjct: 1052 AGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 5/181 (2%)

Query: 50   FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
             +N   K+GN+  N A   F  MIK    P + S+TIL+  L    + D  V  F+ L  
Sbjct: 934  LINGFGKAGNV--NIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKL 991

Query: 110  NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
             GL PD    NL+IN L K      A  +   +     +P   T+N LI      G + +
Sbjct: 992  TGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQ 1051

Query: 170  AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
            A ++F++L     +PNV T+N LI G  ++ N   A  +F++M+      C P+  T+  
Sbjct: 1052 AGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMI---VGCSPNAGTFAQ 1108

Query: 230  I 230
            +
Sbjct: 1109 L 1109


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 168/614 (27%), Positives = 299/614 (48%), Gaps = 43/614 (7%)

Query: 22  FW-CSFGRPPNPKTDLSSHHFKDG-----TSIAKFLNDRHKSGNITSNEAVYFFDCMIKM 75
            W CS  +  +  TDL S   KDG      S+ + L     S +     AV  F  +I  
Sbjct: 94  LWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAV--FADVIDS 151

Query: 76  KPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
              P   ++   +      K  D    L K +  +G+ P +F  NL++  LCK+     A
Sbjct: 152 GTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDA 211

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             +   +++    PNTVT+N LI+G C  G I EA    +++     + N+VT+N+L+NG
Sbjct: 212 RKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNG 271

Query: 196 LCRT------RNTLVALK------------LFEEMVNEFG-------AICKPDVVTYNSI 230
           LC +      R  L+ ++            +F++  N  G          + D  TY  +
Sbjct: 272 LCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCIL 331

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ++GLC+ G ++KA+E+L ++ +  + P+ I+YN L+  +C   D K+A     +M + G+
Sbjct: 332 LNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGL 391

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
           +P+ +TFN +I+  C+ G++D     +  M+++GV+P   TYNSL++G+   G   R  E
Sbjct: 392 EPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFE 451

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
               M   G + +V SY  LIN  CKD+K+ DA  +  +M+   + P+   YN L+    
Sbjct: 452 FLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASC 511

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
            +  L DA +  D+M  + +     T+ T I+GL +NG V +A  +F  +    C   + 
Sbjct: 512 SLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVI 571

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG--QMDKANDLLL 528
           TYN LI+G  K    +   +L+ +++  G  P V T   +I+   KEG   MDK    +L
Sbjct: 572 TYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEML 631

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            M+    VP +  +  ++  + ++    K + L  +M  + +    ++ +S ++  L +D
Sbjct: 632 QMD---LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYL-RD 687

Query: 589 KKYRECLNQFRHLL 602
           ++    +++ +HL+
Sbjct: 688 RR----VSEIKHLV 697



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 242/507 (47%), Gaps = 31/507 (6%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           LL + + +K  D    L+  +  +G  P    +N L+  L           V   ++ S 
Sbjct: 93  LLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSG 152

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+ V +   +        + +   L K +      P+V  +N ++ GLC+ R    A 
Sbjct: 153 TRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDAR 212

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           KLF+EM+        P+ VTYN++IDG CK G +++A     +MK++N+  N++TYNSL+
Sbjct: 213 KLFDEMIQRNMV---PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLL 269

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQP----------------------------DVVTFN 298
            G C      +A+ + +EM  +G  P                            D  T+ 
Sbjct: 270 NGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYC 329

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            ++N  C+ G+++K   +L  +++ GV P  ++YN L++ +C  G + +A      M  +
Sbjct: 330 ILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   +  ++N +I+  C+  +V+ A    R M+ + + P+V TYN+L++G  Q G+    
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRC 449

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            + +D+M    + P+  ++ + I+ LCK+  +++A  V   +         E YN LI  
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            C + +LK A + F  +   G    +VT +T+I+ L + G++ KA DL L M  K C P 
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +T+ +L+ G+ ++    K + L  KM
Sbjct: 570 VITYNSLISGYAKSVNTQKCLELYDKM 596



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 204/395 (51%), Gaps = 4/395 (1%)

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +L+N LC++G    A  VL +++ +  TP+ +++N L+N  C EG + +A    +++   
Sbjct: 330 ILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
             +PN +TFNT+I+  C T     A      MV +      P V TYNS+I+G  + G  
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKG---VSPTVETYNSLINGYGQKGHF 446

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +  E L +M    I PNVI+Y SLI   C      +A+ +  +M+  GV P+   +N +
Sbjct: 447 VRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNML 506

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I  +C   K+    R  + MIQ G++   VTYN+L++G    GR+ +A +LF+ M  KGC
Sbjct: 507 IEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC 566

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             DV +YN LI+   K    +  + LY +M    I+P+V T++ L+    + G +    K
Sbjct: 567 NPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVV-TMDK 625

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           +  +M   D+VPD F +   I    ++G V++A+ + Q + +   +    TYN LI    
Sbjct: 626 MFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYL 685

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +  R+     L   ++ KG +P V T + +I  LC
Sbjct: 686 RDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLC 720



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 207/476 (43%), Gaps = 72/476 (15%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++ ILL  L +  + +    +  +L  NG+ P     N+L+N  C+ G    A +   ++
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 PN +TFN +I+  C  G +  A    +++      P V T+N+LING  +  + 
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           +   +  +EM     A  KP+V++Y S+I+ LCKD  +  A+ +L  M  R ++PN   Y
Sbjct: 447 VRCFEFLDEMDK---AGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIY 503

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N LI   C +   K+A   F EM+ +G+   +VT+N +IN   ++G++ K   L   M  
Sbjct: 504 NMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG 563

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG--------------CRH------ 362
           +G NPD +TYNSL+ G+       +  EL+  M   G              CR       
Sbjct: 564 KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTM 623

Query: 363 --------------DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
                         D + YN +I +  +D  V  A+ L+++M+ + +    +TYN+L+  
Sbjct: 624 DKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILA 683

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             +   + +   L+D M+   +VP   T+                               
Sbjct: 684 YLRDRRVSEIKHLVDDMKAKGLVPKVDTY------------------------------- 712

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               N LI GLC +     A   +  +  +G + +V  C  +I  L +EG + +A 
Sbjct: 713 ----NILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQ 764



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 168/347 (48%), Gaps = 4/347 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++   SP + ++  L+    +   +         ++  G+ P++     LINCLCK   
Sbjct: 421 MVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRK 480

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A +VL  ++    +PN   +N LI   C+  ++ +A R F ++     D  +VT+NT
Sbjct: 481 LIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNT 540

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LINGL R      A  LF +M    G  C PDV+TYNS+I G  K     K  EL  +MK
Sbjct: 541 LINGLGRNGRVKKAEDLFLQMA---GKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMK 597

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              I P V T++ LI   C  +       +F EM+   + PD   +N MI    +DG + 
Sbjct: 598 ILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVM 656

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K   L + M+ +GV+ D VTYNSL+  +    R+S  + L   M +KG    V +YNILI
Sbjct: 657 KAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
              C  +    A   YREM+   +  +V     L+SGL + G L +A
Sbjct: 717 KGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA 763



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 153/294 (52%), Gaps = 8/294 (2%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F D M K    P + S+  L+  L K+++      +   +   G+ P+  + N+LI   C
Sbjct: 452 FLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASC 511

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
            +     AF     +++S      VT+N LINGL   GR+ +A  LF ++    C+P+V+
Sbjct: 512 SLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVI 571

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV--DKAKE 245
           T+N+LI+G  ++ NT   L+L+++M    G   KP V T++ +I    K+G V  DK  +
Sbjct: 572 TYNSLISGYAKSVNTQKCLELYDKM-KILG--IKPTVGTFHPLIYACRKEGVVTMDKMFQ 628

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
            +LQM   ++ P+   YN +I  +    +  +A  L  +M+D GV  D VT+N++I    
Sbjct: 629 EMLQM---DLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYL 685

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +D ++ ++  L++ M  +G+ P   TYN L+ G C +   + A   +  MV +G
Sbjct: 686 RDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERG 739


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/500 (29%), Positives = 249/500 (49%), Gaps = 3/500 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+    SP + +++ L+    K +++DT   +   +   G   +    N+LI  LC+ G 
Sbjct: 235 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 294

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              AF     +      P+  T+  LINGLC   R  EA  L  +++     PNVV +  
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+G  R  N   A K+ +EMV    A  +P+ +TY++++ GLCK G +D+A  LL QM 
Sbjct: 355 LIDGFMREGNADEAFKMIKEMV---AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 411

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             +  P+ ITYN +I G       K+A  L  EM + G+ P+V T++ MI+  C+ G+ +
Sbjct: 412 RDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 471

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K + LLE M  +G+ P+   Y  L+ G+C  G +S A E+F  M       D+Y YN LI
Sbjct: 472 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 531

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
               K  +VE++   + +M    + P+  TY+ L+ G  + G+L  A +L+ +M    + 
Sbjct: 532 FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 591

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+   +   ++   K+  + +    F+++ +    L    Y  LI+ L   G ++ A ++
Sbjct: 592 PNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 651

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              ++  G +PDV   S++I  LCK    +KA  +L +M  K   P+ V +  L+ G  +
Sbjct: 652 LSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCK 711

Query: 552 NNKKSKVVVLLHKMAAEKLV 571
           +   S    + + + A+ LV
Sbjct: 712 SGDISYARNVFNSILAKGLV 731



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 265/559 (47%), Gaps = 7/559 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG +    +N   KS    SNEA    D M   +  P +  +  L+    +    D    
Sbjct: 313 DGFTYGALINGLCKSRR--SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 370

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           + K + + G+ P+    + L+  LCKMG    A ++L +++R    P+T+T+N +I G  
Sbjct: 371 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 430

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
                 +A RL  ++      PNV T++ +I+GLC++     A  L EEM  +     KP
Sbjct: 431 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG---LKP 487

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +   Y  +I G C++G V  A E+  +M   N+ P++  YNSLI G   V   +E+   F
Sbjct: 488 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 547

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M + G+ P+  T++ +I+   K+G ++   +L++ M+  G+ P+ V Y  L++ +   
Sbjct: 548 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 607

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             I +    F SM+ +G   D   Y ILI+       +E A  +   +      P V  Y
Sbjct: 608 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVY 667

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           ++L+SGL +  +   A  ++D+M    V P+   +   IDGLCK+G +  A  VF +I  
Sbjct: 668 SSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILA 727

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                   TY  LI+G CK+G +  A  L++ +   G  PD    S +       G +++
Sbjct: 728 KGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQ 787

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A  L+ +M  +    S  +F  L+ GF +  K  + + LLH +    LV + L++ + ++
Sbjct: 788 AMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN-II 845

Query: 583 DLLSKDKKYRECLNQFRHL 601
             LS+  K  E    F  L
Sbjct: 846 SGLSEAGKLSEVHTIFVEL 864



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 239/484 (49%), Gaps = 11/484 (2%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +L+ M+        V++   R  S+       VL++L++   K G    A  V+  +   
Sbjct: 144 LLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDR 203

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF----ACDPNVVTFNTLINGLCRTRN 201
              P+    N L+  L       +A  L  K+  F       P+V T++TLI   C+ R 
Sbjct: 204 GMAPSIRCCNALLKDLLRA----DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVRE 259

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A K+  EM  E G  C  + VTYN +I GLC+ G V++A      M+D  + P+  T
Sbjct: 260 FDTAKKVLVEM-RERG--CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 316

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y +LI G C      EAK L  EM    ++P+VV +  +I+   ++G  D+  ++++ M+
Sbjct: 317 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 376

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             GV P+ +TY++L+ G C +G++ RA  L   MV    R D  +YN++I  + +    +
Sbjct: 377 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 436

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           DA  L  EM +  I P+V TY+ ++ GL Q G    A  L+++M    + P++F +A  I
Sbjct: 437 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 496

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            G C+ G V  A ++F  +        +  YN LI GL K+GR++ + K F ++Q +G +
Sbjct: 497 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 556

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P+  T S +IH   K G ++ A  L+  M      P++V +  LL  + +++   KV   
Sbjct: 557 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 616

Query: 562 LHKM 565
              M
Sbjct: 617 FKSM 620



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/544 (25%), Positives = 257/544 (47%), Gaps = 45/544 (8%)

Query: 48  AKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL 107
           A  ++   + GN  ++EA      M+     P   ++  L+  L K  Q D    L K++
Sbjct: 353 ANLIDGFMREGN--ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 410

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
             +   PD    NL+I    +      AF +L  +  +  +PN  T++ +I+GLC  G  
Sbjct: 411 VRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 470

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM--VNEFGAICKPDVV 225
            +A+ L +++      PN   +  LI+G CR  N  +A ++F++M  VN       PD+ 
Sbjct: 471 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL-----PDLY 525

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
            YNS+I GL K G V+++ +   QM++R + PN  TY+ LI G+    D + A+ L   M
Sbjct: 526 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585

Query: 286 MDNGVQP-DVV-------------------TFNAMINYN---------------CKDGKM 310
           +D G++P DV+                   TF +M++                    G M
Sbjct: 586 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 645

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           +   R+L  + + G  PD   Y+SL+ G C      +A  +   M  KG   ++  YN L
Sbjct: 646 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 705

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+  CK   +  A  ++  +L++ + P+ +TY +L+ G  +VG++ +A  L ++M    +
Sbjct: 706 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 765

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD+F ++    G    G + +A+ + + +   +    I ++N L++G CK G+++   K
Sbjct: 766 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF-LRGHASISSFNNLVDGFCKRGKMQETLK 824

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L H +  +G +P+ +T   +I  L + G++ + + + ++++ K    +   F +L    +
Sbjct: 825 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 884

Query: 551 QNNK 554
              K
Sbjct: 885 NQGK 888



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/603 (22%), Positives = 246/603 (40%), Gaps = 125/603 (20%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            + A      M++    P   ++ +++    ++        L   + + G+ P+++  +++
Sbjct: 401  DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIM 460

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I+ LC+ G    A  +L  +      PN   +  LI+G C EG +  A  +F K+     
Sbjct: 461  IHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 520

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             P++  +N+LI GL +      + K F +M  E G +  P+  TY+ +I G  K+G ++ 
Sbjct: 521  LPDLYCYNSLIFGLSKVGRVEESTKYFAQM-QERGLL--PNEFTYSGLIHGYLKNGDLES 577

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ----------- 291
            A++L+ +M D  + PN + Y  L+  +   DD ++    F  M+D GV            
Sbjct: 578  AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 637

Query: 292  ------------------------PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                                    PDV  ++++I+  CK    +K   +L+ M ++GV+P
Sbjct: 638  NLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 697

Query: 328  DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
            + V YN+L+DG C  G IS AR +F S+++KG   +  +Y  LI+ +CK   + +A  LY
Sbjct: 698  NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLY 757

Query: 388  REMLSERIRP----------------------------------SVITYNTLLSGLFQVG 413
             EML+  I P                                  S+ ++N L+ G  + G
Sbjct: 758  NEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRG 817

Query: 414  NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR------------ 461
             + + LKL+  +    +VP++ T    I GL + G + E   +F  ++            
Sbjct: 818  KMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFS 877

Query: 462  -----------------------NCK------------------CELRIETYNCLINGLC 480
                                   +CK                    +   +Y  +++ LC
Sbjct: 878  SLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLC 937

Query: 481  KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
            + G+L  A  L   +  +G  P    C  ++  L   G + + N +L +M     +  + 
Sbjct: 938  RKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNMLCHKWLQKDS 997

Query: 541  TFC 543
             FC
Sbjct: 998  KFC 1000



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 171/388 (44%), Gaps = 43/388 (11%)

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD----WKEAKCLFIEM 285
           ++D   K G V  A E++L M+DR + P++   N+L+      D     WK  +     M
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREF----M 235

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           +  G+ PDV T++ +I   CK  + D   ++L  M +RG   +TVTYN L+ G C  G +
Sbjct: 236 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 295

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A      M   G   D ++Y  LIN  CK ++  +A  L  EM    ++P+V+ Y  L
Sbjct: 296 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 355

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG----------------- 448
           + G  + GN  +A K+I +M    V P+  T+   + GLCK G                 
Sbjct: 356 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 415

Query: 449 --------FVLE----------AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
                    ++E          A ++   + N      + TY+ +I+GLC+ G  + A  
Sbjct: 416 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L   +  KG  P+    + +I   C+EG +  A ++   M   N +P    + +L+ G  
Sbjct: 476 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 535

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
           +  +  +      +M    L+ ++ + S
Sbjct: 536 KVGRVEESTKYFAQMQERGLLPNEFTYS 563



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 96/200 (48%)

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           ++L++   K  +V+DA  +   M    + PS+   N LL  L +   +    K+ + M  
Sbjct: 178 DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVG 237

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + PD +T++T I+  CK      A +V   +R   C L   TYN LI GLC+ G ++ 
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A      ++  G +PD  T   +I+ LCK  + ++A  LL +M      P+ V +  L+ 
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357

Query: 548 GFVQNNKKSKVVVLLHKMAA 567
           GF++     +   ++ +M A
Sbjct: 358 GFMREGNADEAFKMIKEMVA 377


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 248/511 (48%), Gaps = 56/511 (10%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVL 119
            +A + FD +++      +      L  +A++      VS + R+   G   + PDL   
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGADEVTPDLCTY 90

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLN 178
            +LI C C+ G     F  LG +++  F    +TF  L+ GLCA+ R  +A  +  +++ 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C PNV ++N L+NGLC    +  AL+L   M ++ G    PDVV+Y ++I+G  K+G
Sbjct: 151 ELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFC---CVDD-WK--------EAKCLFIEMM 286
             DKA     +M DR I P+V+TY+S+I   C    +D  W         E++ LF  M+
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMV 270

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             GV+PD++T++ +I+  C  GKMD+  +LL  M+  G+ P+TVTY++L++G+C + R+ 
Sbjct: 271 RIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 330

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  LF  M S G   D+ +YNI++    + ++   A  LY  +     +  + TYN +L
Sbjct: 331 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 390

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL                                   CKN    +A+Q+FQ +  C  +
Sbjct: 391 HGL-----------------------------------CKNKLTDDALQMFQNL--CLMD 413

Query: 467 LRIE--TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           L++E  T+N +I+ L K+GR   A  LF      G +P+  T   M   +  +G +++ +
Sbjct: 414 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 473

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
            L L ME   C         ++R  +Q   K
Sbjct: 474 QLFLSMEDNGCTVDSGMLNFIVRELLQRALK 504



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 139/282 (49%), Gaps = 27/282 (9%)

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           V PD+ T+  +I   C+ G++D     L  +I++G   + +T+  L+ G C   R S A 
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 350 ELFVS-MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER---IRPSVITYNTL 405
           ++ +  M   GC  +V+SYN L+N  C + + ++A+ L   M  +R     P V++Y T+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           ++G F+ G+   A     +M    ++PD  T+++ I  LCK           QA+     
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKG----------QAMDKPWS 252

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                         CK GR+  + KLF  +   G  PD++T ST+I   C  G+MD+A  
Sbjct: 253 H-------------CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMK 299

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           LL  M +    P+ VT+ TL+ G+ + ++    +VL  +M +
Sbjct: 300 LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 341



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 17/303 (5%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G+  S++A   +  M+     P + +++ ++  L K +  D   S
Sbjct: 195 DVVSYTTVINGFFKEGD--SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWS 252

Query: 103 ------------LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
                       LF  +   G+ PD+   + LI+  C  G    A  +L  ++     PN
Sbjct: 253 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN 312

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
           TVT++ LING C   R+ +A  LFK++      P+++T+N ++ GL +TR T  A +L+ 
Sbjct: 313 TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 372

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
            +      I   ++ TYN I+ GLCK+   D A ++   +   ++     T+N +I    
Sbjct: 373 RITESGTQI---ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 429

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            V    EAK LF+    NG+ P+  T+  M       G ++++++L   M   G   D+ 
Sbjct: 430 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 489

Query: 331 TYN 333
             N
Sbjct: 490 MLN 492



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 16/233 (6%)

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +Y ILI   C+  +++        ++ +  R   IT+  LL GL       DA+ ++
Sbjct: 86  DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIV 145

Query: 423 -DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI---RNCKCELRIETYNCLING 478
             +M     +P+ F++   ++GLC      EA+++   +   R       + +Y  +ING
Sbjct: 146 LRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA-----------NDLL 527
             K G    A   +H +  +G +PDVVT S++I  LCK   MDK            ++ L
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKL 265

Query: 528 LDMEAKNCV-PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            D+  +  V P  +T+ TL+ G+    K  + + LL  M +  L  + ++ S+
Sbjct: 266 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 318


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 259/519 (49%), Gaps = 18/519 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P  +++T ++T L + K+ +    LF+ +   G+ PD++   +LI+  CK G+
Sbjct: 443 MMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGL 502

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A      +     +PN VT+  L++      ++++A  +F ++   AC PN VT++ 
Sbjct: 503 IEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSA 562

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAI-------------CKPDVVTYNSIIDGLCKDG 238
           LI+GLC+      A +++E+++   G +               P+VVTY ++IDGLCK  
Sbjct: 563 LIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQ 622

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V  A ELL  M      PN I Y++LI GFC +     A+ +F+ M   G  P V T+ 
Sbjct: 623 KVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYT 682

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++I+   KDG++D   ++L  M+    NP+ VTY +++DG   VG I +A  L   M  K
Sbjct: 683 SLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEK 742

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  +V +Y  LI+   K  K + ++ L+++M S+   P+ +TY  L++     G L +A
Sbjct: 743 GCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEA 802

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L+D+M+          +   + G  K    + ++ + + + + +       Y  LI+ 
Sbjct: 803 HLLLDEMKHTHWPKHLQGYHCAVQGFSKK--FIASLGLLEEMESHETVPIAPVYGMLIDS 860

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTC---STMIHWLCKEGQMDKANDLLLDMEAKNC 535
             K GRL+TA +L   L       ++ +    +++I  LC   Q+++A  L  +M  K  
Sbjct: 861 FSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGI 920

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           VP  + F +L++G ++ NK  + + L +    E +   D
Sbjct: 921 VPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGVNWQD 959



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 163/649 (25%), Positives = 287/649 (44%), Gaps = 70/649 (10%)

Query: 14  SKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITS---NEAVYFFD 70
           S  GY     C  GR  +    L    F    ++   L  +  SG + +   NEA+ F  
Sbjct: 240 STIGYFAQALCKVGRWADALNMLEKEDF----NLDTVLCTQMISGLMEASLFNEAMSFLH 295

Query: 71  CMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG 130
            M      P + ++  LL+   K KQ+     +   + + G  P+  + N L++  C  G
Sbjct: 296 RMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAG 355

Query: 131 ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE-------------------------- 164
             + A+ +  R+      P  V +N  I  +C +                          
Sbjct: 356 DYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVL 415

Query: 165 ---------------GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
                          G+  +A ++ K++      P+  T+  +I  LC+ +    +  LF
Sbjct: 416 NKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLF 475

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           +EM     A   PDV TY  +ID  CK G +++A+    +M+    +PNV+TY +L+  +
Sbjct: 476 QEMKR---AGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAY 532

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN--- 326
                  +A  +F  M+D    P+ VT++A+I+  CK G++ K   + E +I    N   
Sbjct: 533 LKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVES 592

Query: 327 -------------PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
                        P+ VTY +L+DG C   ++S A EL  +M++ GC  +   Y+ LI+ 
Sbjct: 593 DFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDG 652

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK  K+++A  ++  M      PSV TY +L+  +F+ G L  A+K++ +M  +   P+
Sbjct: 653 FCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPN 712

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   IDGL K G + +A+ +   +    C   + TY  LI+GL K G+   + KLF 
Sbjct: 713 VVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFK 772

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           ++  KG  P+ VT   +I+  C  G +D+A+ LL +M+  +       +   ++GF  + 
Sbjct: 773 QMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SK 830

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           K    + LL +M + +  V    +   ++D  SK  +    L   + L+
Sbjct: 831 KFIASLGLLEEMESHE-TVPIAPVYGMLIDSFSKAGRLETALELHKELV 878



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 265/580 (45%), Gaps = 64/580 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  L+ +LA   Q +    + K ++++G   D   +      LCK+G  + A   
Sbjct: 202 PSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADA--- 258

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  + +  F  +TV    +I+GL       EA     ++   +C PNVVT+ TL++G  +
Sbjct: 259 LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 318

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +      ++   M+ E    C P+   +NS++ G C  G    A +L  +M      P 
Sbjct: 319 KKQFGWCKRIINMMMTEG---CNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPG 375

Query: 259 VITYN---SLICG--------------------------------------FCCVDDWKE 277
            + YN     ICG                                       C V  +++
Sbjct: 376 YVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEK 435

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +  EMM  G  PD  T+  +I + C+  K++K   L + M + GVNPD  TY  L+D
Sbjct: 436 AFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILID 495

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC  G I +AR  F  M S GC  +V +Y  L++A  K +++  A  ++  M+     P
Sbjct: 496 SFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYP 555

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKM-------------QLND---VVPDSFTFATYI 441
           + +TY+ L+ GL + G +  A ++ +K+             + ND   + P+  T+   I
Sbjct: 556 NAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALI 615

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCK   V +A ++  A+    CE     Y+ LI+G CK+G++  A ++F R+   G +
Sbjct: 616 DGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYL 675

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P V T +++I  + K+G++D A  +L +M   +C P+ VT+  ++ G  +  +  K + L
Sbjct: 676 PSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNL 735

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L  M  EK    ++   + ++D L K  K    L  F+ +
Sbjct: 736 LSLM-EEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM 774



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 237/471 (50%), Gaps = 24/471 (5%)

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
           CLC +G    AF +L  ++R  F P+T T+  +I  LC   ++ ++  LF+++     +P
Sbjct: 426 CLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNP 485

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T+  LI+  C+      A   F+EM +     C P+VVTY +++    K   + +A 
Sbjct: 486 DVYTYTILIDSFCKAGLIEQARSWFDEMRS---VGCSPNVVTYTALLHAYLKSKQLIQAH 542

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG--------------- 289
           ++  +M D    PN +TY++LI G C   + ++A  ++ +++                  
Sbjct: 543 DIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTC 602

Query: 290 -VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
            + P+VVT+ A+I+  CK  K+   + LL+ M+  G  P+ + Y++L+DGFC +G+I  A
Sbjct: 603 TIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNA 662

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           +E+F+ M   G    V++Y  LI+   KD +++ A+ +  EML++   P+V+TY  ++ G
Sbjct: 663 QEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDG 722

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L +VG +  AL L+  M+     P+  T+   IDGL K G    ++++F+ + +  C   
Sbjct: 723 LSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPN 782

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
             TY  LIN  C  G L  A  L   ++H      +      +    K  +   +  LL 
Sbjct: 783 YVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLE 840

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +ME+   VP    +  L+  F +  +  +  + LHK   E  V S L+++S
Sbjct: 841 EMESHETVPIAPVYGMLIDSFSKAGRL-ETALELHKELVE--VSSSLNMTS 888



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 239/480 (49%), Gaps = 28/480 (5%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            F  M +   +P + ++TIL+    K    +   S F  + S G  P++     L++   
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL 533

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL---------- 177
           K      A  +  R++ +   PN VT++ LI+GLC  G I +A  +++KL          
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESD 593

Query: 178 ------NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
                 +     PNVVT+  LI+GLC+ +    A +L + M+    A C+P+ + Y+++I
Sbjct: 594 FYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAML---AAGCEPNQIVYDALI 650

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           DG CK G +D A+E+ L+M      P+V TY SLI           A  +  EM+++   
Sbjct: 651 DGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCN 710

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           P+VVT+ AMI+   K G+++K   LL LM ++G +P+ VTY +L+DG    G+   + +L
Sbjct: 711 PNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKL 770

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M SKGC  +  +Y +LIN  C    +++A  L  EM        +  Y+  + G  +
Sbjct: 771 FKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK 830

Query: 412 --VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
             + +LG    L+++M+ ++ VP +  +   ID   K G +  A+++ + +      L +
Sbjct: 831 KFIASLG----LLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNM 886

Query: 470 ET---YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
            +   Y  LI  LC   +++ A  L+  +  KG +PD++   +++  L +  + D+A  L
Sbjct: 887 TSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 214/488 (43%), Gaps = 51/488 (10%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +LN+L+   C+ G+   A   LGR+    + P+ VT+N L+  L + G++    R+ K++
Sbjct: 171 LLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEM 230

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE---------------------MVNEF 216
           +      +  T       LC+      AL + E+                     + NE 
Sbjct: 231 SASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEA 290

Query: 217 GAI--------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            +         C P+VVTY +++ G  K       K ++  M     NPN   +NSL+ G
Sbjct: 291 MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHG 350

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM------DKVNRLLELMIQ 322
           +C   D+  A  LF  M   G  P  V +N  I   C   ++      D V ++ E M+ 
Sbjct: 351 YCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLA 410

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
                + V   +     C VG+  +A ++   M+ KG   D  +Y  +I   C+ +KVE 
Sbjct: 411 ASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEK 470

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           +  L++EM    + P V TY  L+    + G +  A    D+M+     P+  T+   + 
Sbjct: 471 SFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLH 530

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL-QHKGPI 501
              K+  +++A  +F  + +  C     TY+ LI+GLCK G ++ AC+++ +L    G +
Sbjct: 531 AYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNV 590

Query: 502 ---------------PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
                          P+VVT   +I  LCK  ++  A++LL  M A  C P+++ +  L+
Sbjct: 591 ESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALI 650

Query: 547 RGFVQNNK 554
            GF +  K
Sbjct: 651 DGFCKIGK 658



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 175/368 (47%), Gaps = 11/368 (2%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           SGN+ S+   ++F+       +P + ++  L+  L K ++      L   + + G  P+ 
Sbjct: 587 SGNVESD---FYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQ 643

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            V + LI+  CK+G    A  V  R+ +  + P+  T+  LI+ +  +GR+  A ++  +
Sbjct: 644 IVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSE 703

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +   +C+PNVVT+  +I+GL +      AL L   ++ E G  C P+VVTY ++IDGL K
Sbjct: 704 MLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLL-SLMEEKG--CSPNVVTYTALIDGLGK 760

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G  D + +L  QM  +   PN +TY  LI   C      EA  L  EM        +  
Sbjct: 761 TGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQG 820

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           ++  +    K  K      LLE M      P    Y  L+D F   GR+  A EL   +V
Sbjct: 821 YHCAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELV 878

Query: 357 SKGCRHDVYS---YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
                 ++ S   Y  LI A C   +VE+A  LY EM  + I P +I + +L+ GL +V 
Sbjct: 879 EVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVN 938

Query: 414 NLGDALKL 421
              +AL+L
Sbjct: 939 KWDEALQL 946



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/418 (23%), Positives = 171/418 (40%), Gaps = 47/418 (11%)

Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
            N L+   C  G   EA     +L  F   P+ VT+N L+  L       +  ++ +EM 
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEM- 230

Query: 214 NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
                 C  D  T       LCK   V +  + L  ++  + N + +    +I G     
Sbjct: 231 -SASGFCM-DRSTIGYFAQALCK---VGRWADALNMLEKEDFNLDTVLCTQMISGLMEAS 285

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
            + EA      M  N   P+VVT+  +++   K  +     R++ +M+  G NP+   +N
Sbjct: 286 LFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFN 345

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL------Y 387
           SL+ G+C  G  + A +LF  M + G      +YNI I + C  +++ +A  L      Y
Sbjct: 346 SLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVY 405

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            EML+     + +        L  VG    A +++ +M     VPD+             
Sbjct: 406 EEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDT------------- 452

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
                                  TY  +I  LC+  +++ +  LF  ++  G  PDV T 
Sbjct: 453 ----------------------STYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTY 490

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           + +I   CK G +++A     +M +  C P+ VT+  LL  ++++ +  +   + H+M
Sbjct: 491 TILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRM 548



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 143/347 (41%), Gaps = 54/347 (15%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG   A+ ++D H+             D M+     P    +  L+    K  + D    
Sbjct: 616 DGLCKAQKVSDAHE-----------LLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQE 664

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F R+   G  P +     LI+ + K G    A  VL  +L     PN VT+  +I+GL 
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLS 724

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G I +A  L   +    C PNVVT+  LI+GL +T     +LKLF++M N  G  C P
Sbjct: 725 KVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM-NSKG--CAP 781

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           + VTY  +I+  C  G +D+A  LL +MK  +   ++  Y+  + GF     +  +  L 
Sbjct: 782 NYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFS--KKFIASLGLL 839

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKV----NRLLEL------------------- 319
            EM  +   P    +  +I+   K G+++        L+E+                   
Sbjct: 840 EEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQAL 899

Query: 320 ---------------MIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
                          M ++G+ PD + + SL+ G   V +   A +L
Sbjct: 900 CLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 161/571 (28%), Positives = 263/571 (46%), Gaps = 57/571 (9%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+TIL+  L    + D    +F +++     P +    +L++ LCK+     A  +LG +
Sbjct: 163 SYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEM 222

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +     PN VT+N LI GLC EGR  +  +L +K+ +    P+  T+  +++GLC+    
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKV 282

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
               K+  E + +  A+   +V+TYN++I+G CK G +  A ++L  MK   +NP V T+
Sbjct: 283 GHGAKVLHEAIGKGVAL---EVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTF 339

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N +I GFCC     +A     +M   G+ P+ VTFN++I+  C  G+     RLL+LM +
Sbjct: 340 NEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEE 399

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            GV PD  TY   +D  C  G++  A  LF  +  KG +     Y  L++  C+   ++ 
Sbjct: 400 YGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDS 459

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L  +M SE   P V TYNTL+ GL +V  L  A+ L+DKM+   + P + TF   I 
Sbjct: 460 AFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIK 519

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCE-------LRI-------------------------- 469
            +  +    +A ++++ + +  C+       L+I                          
Sbjct: 520 QMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGV 579

Query: 470 ----ETYNCLINGLCKMGRLKTACKLFHRLQHKGPI-PDVVTCSTMIHWLCKEGQMDKAN 524
               ETYN +I      G LK      H      PI PD  T S +++++C +   D  +
Sbjct: 580 FPDVETYNAIIKAYVDAG-LKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFD 638

Query: 525 --------------DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
                         +L   M   +  P   T+  LLRG     +  +V  LL KM    +
Sbjct: 639 NEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSI 698

Query: 571 VVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           ++ D  +S  ++      + YRE   QFR +
Sbjct: 699 LL-DEDMSDYLLGCYCNLEMYREACEQFRSM 728



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 223/462 (48%), Gaps = 37/462 (8%)

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            G +L+S   PN  T+N LIN  C    + +A     ++      P+  T+N L+ GLCR
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  LF +M   +GA    D  +Y  +I GLC  G +D A  +  +M      P 
Sbjct: 138 AGLLAAACGLFVQMPRRWGAC--YDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPG 195

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TY  L+ G C V    EA+ L  EM++ GV P+VVT+NA+I   C++G+ D V +LLE
Sbjct: 196 VHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLE 255

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK-- 376
            M  +  +PD  TY  ++ G C  G++    ++    + KG   +V +YN LIN  CK  
Sbjct: 256 KMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGG 315

Query: 377 ---------------------------------DQKVEDAVCLYREMLSERIRPSVITYN 403
                                              KV  A+    +M    + P+ +T+N
Sbjct: 316 DMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFN 375

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +L+SG   VG    AL+L+D M+   V+PD  T+A +ID LC  G + EA  +F  +   
Sbjct: 376 SLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMK 435

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +     Y  L++G C++G + +A  L  ++  +  +PDV T +T+I  LCK  ++D+A
Sbjct: 436 GIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRA 495

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            DLL  M+ +   P+  TF  L++  + + K +    +  +M
Sbjct: 496 IDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM 537



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/537 (29%), Positives = 246/537 (45%), Gaps = 45/537 (8%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  M+K    P   ++  L+    K        +   R+   GL PD F  N L+  LC+
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 129 MGITSGA---FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP- 184
            G+ + A   FV + R   +C+  +  ++  LI GLCA GRI +A R+F K++   C P 
Sbjct: 138 AGLLAAACGLFVQMPRRWGACY--DRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPG 195

Query: 185 ----------------------------------NVVTFNTLINGLCRTRNTLVALKLFE 210
                                             NVVT+N LI GLC+        KL E
Sbjct: 196 VHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLE 255

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           +M  +  +   PD  TY  ++ GLCK G V    ++L +   + +   V+TYN+LI G+C
Sbjct: 256 KMEIQRHS---PDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYC 312

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
              D K A  +   M  N V P V TFN +I+  C  GK+ K    L  M   G++P+TV
Sbjct: 313 KGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTV 372

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           T+NSL+ G C VG    A  L   M   G   D  +Y I I+A C + ++E+A  L+  +
Sbjct: 373 TFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCL 432

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
             + I+   + Y +L+ G  QVG++  A  L++KM   + +PD  T+ T IDGLCK   +
Sbjct: 433 PMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRL 492

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             A+ +   ++    E    T+N LI  +    +   A K++ ++   G  PD  T +  
Sbjct: 493 DRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLK 552

Query: 511 IHWLCKEGQMDKAN-DL-LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           I     EG   + N D+ +++M      P   T+  +++ +V    K K      KM
Sbjct: 553 ISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKM 609



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 145/560 (25%), Positives = 243/560 (43%), Gaps = 60/560 (10%)

Query: 76  KPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
           + SP   ++T ++  L K+ +      +       G+  ++   N LIN  CK G    A
Sbjct: 261 RHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAA 320

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             VL  + R+   P   TFN +I+G C  G++ +A     ++      PN VTFN+LI+G
Sbjct: 321 LDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISG 380

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            C      +AL+L  +++ E+G +  PD  TY   ID LC +G +++A  L   +  + I
Sbjct: 381 QCSVGERKIALRLL-DLMEEYGVL--PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI 437

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
             + + Y SL+ G+C V D   A  L  +M      PDV T+N +I+  CK  ++D+   
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAID 497

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN- 374
           LL+ M ++G+ P T T+N L+       + + A +++  M+S GC+ D  +Y + I+ + 
Sbjct: 498 LLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDW 557

Query: 375 ----CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
                K++ ++ AV    EM    + P V TYN ++      G    A     KM    +
Sbjct: 558 FEGATKEENIDMAVV---EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPI 614

Query: 431 VPDSFTFATYIDGLC----KNGFVLEAVQVFQAIRNCK------CELR----IETYNCLI 476
            PD  T++  ++ +C     + F  E +     +RN +      CE      I TY  L+
Sbjct: 615 DPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALL 674

Query: 477 NGLCKMGRL-----------------------------------KTACKLFHRLQHKGPI 501
            GLC   RL                                   + AC+ F  + H+   
Sbjct: 675 RGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQ 734

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P + +C  ++  LC  G    A  +  DM        EV +  L+    +       + +
Sbjct: 735 PGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEM 794

Query: 562 LHKMAAEKLVVSDLSLSSKV 581
           L  M A+K V S  + +S V
Sbjct: 795 LSVMDAKKCVASTRTYASLV 814



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 194/408 (47%), Gaps = 5/408 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T+NTLIN  C+      A      M     A   PD  TYN ++ GLC+ G +  A
Sbjct: 88  PNRCTYNTLINAHCKLALLADARAALVRMRE---AGLAPDTFTYNCLMLGLCRAGLLAAA 144

Query: 244 KELLLQMKDR-NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
             L +QM  R     +  +Y  LI G C      +A  +F +M     +P V T+  +++
Sbjct: 145 CGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLD 204

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK  ++ +   LL  M+ +GV P+ VTYN+L+ G C  GR     +L   M  +    
Sbjct: 205 GLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSP 264

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D ++Y  +++  CK  KV     +  E + + +   V+TYN L++G  + G++  AL ++
Sbjct: 265 DCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVL 324

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M+ N V P   TF   I G C  G V +A+     +          T+N LI+G C +
Sbjct: 325 QLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSV 384

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G  K A +L   ++  G +PD  T +  I  LC EGQ+++A+ L   +  K      V +
Sbjct: 385 GERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIY 444

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            +L+ G+ Q         L+ KMA+E   + D+   + ++D L K K+
Sbjct: 445 TSLVHGYCQVGDIDSAFGLMEKMASEN-CMPDVHTYNTLIDGLCKVKR 491



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 242/521 (46%), Gaps = 21/521 (4%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K G++ +  A+     M + + +PG+ +F  ++       +    ++   ++  
Sbjct: 307 LINGYCKGGDMKA--ALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAG 364

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            GL P+    N LI+  C +G    A  +L  +      P+  T+   I+ LC EG++ E
Sbjct: 365 AGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEE 424

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  LF  L +     + V + +L++G C+  +   A  L E+M +E    C PDV TYN+
Sbjct: 425 AHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASEN---CMPDVHTYNT 481

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +IDGLCK   +D+A +LL +MK + I P   T+N LI          +A  ++ +M+ +G
Sbjct: 482 LIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSG 541

Query: 290 VQPDVVTFNAMINYNCKDG--KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            +PD  T+   I+ +  +G  K + ++  +  M + GV PD  TYN+++  +   G   +
Sbjct: 542 CKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEK 601

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANC-KDQK-------------VEDAVCLYREMLSE 393
           A    V M+S     D  +Y+IL+N  C KD               V +   L+ +M   
Sbjct: 602 AFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCES 661

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
              P + TY  LL GL     L +   L+ KMQ N ++ D       +   C      EA
Sbjct: 662 DAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREA 721

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
            + F+++ +   +  +++   L++GLC  G    A  +F  +   G   D V    +I  
Sbjct: 722 CEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDC 781

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           L ++G      ++L  M+AK CV S  T+ +L+R   + N+
Sbjct: 782 LHEKGHAGACLEMLSVMDAKKCVASTRTYASLVRLVAELNE 822



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 167/353 (47%), Gaps = 37/353 (10%)

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           F  M+ +G  P+  T+N +IN +CK   +      L  M + G+ PDT TYN LM G C 
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 342 VGRISRARELFVSM-----------------------------------VSKG-CRHDVY 365
            G ++ A  LFV M                                   +S+G CR  V+
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y +L++  CK ++V +A  L  EM+++ + P+V+TYN L+ GL Q G   D  KL++KM
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           ++    PD +T+   + GLCK+G V    +V          L + TYN LING CK G +
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           K A  +   ++     P V T + +IH  C  G++ KA   L  M      P+ VTF +L
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           + G     ++ K+ + L  +  E  V+ D    +  +D L  + +  E  + F
Sbjct: 378 ISGQCSVGER-KIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLF 429



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 125/259 (48%), Gaps = 9/259 (3%)

Query: 328 DTVTYNSLMDGFCLVGRISRAREL------FVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           D  ++N+ +  +    R SRA  L      F +M+  G   +  +YN LINA+CK   + 
Sbjct: 50  DVRSHNAALIAYS--SRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLA 107

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN-DVVPDSFTFATY 440
           DA      M    + P   TYN L+ GL + G L  A  L  +M        D +++   
Sbjct: 108 DARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTIL 167

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I GLC  G + +A +VF  +    C   + TY  L++GLCK+ R+  A  L   + +KG 
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGV 227

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           +P+VVT + +I  LC+EG+ D    LL  ME +   P   T+  ++ G  ++ K      
Sbjct: 228 VPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAK 287

Query: 561 LLHKMAAEKLVVSDLSLSS 579
           +LH+   + + +  L+ ++
Sbjct: 288 VLHEAIGKGVALEVLTYNA 306


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 260/521 (49%), Gaps = 11/521 (2%)

Query: 25  SFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSF 84
           S G PPN  T     +F        +        +I + +A    + M +   SP + ++
Sbjct: 242 STGPPPNVFTYTIMMNF--------YCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           +  +  L +    ++ +   + L S     +++  N +I+ LCK G    A  VL  +  
Sbjct: 294 STYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKS 353

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
              +P+  T++ LI+G C +G + +   L +++     +P++V++++L +GLC+ R + +
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDI 413

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           +L +F ++     A  K D   Y+ +I G C  G +D A +L+ +M   N+ P+   + S
Sbjct: 414 SLDIFRDL---GAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFES 470

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+ GFC +  W  A   F  M++ G+ P + T N +I+ +C++G++++   L+  M  +G
Sbjct: 471 LVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + P+  TYN++++  C   +  RA ELF  M+ +     V  Y+ LI+   K    + A+
Sbjct: 531 IFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKAL 590

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            LY  ML   + P ++ Y  L++ L     + +A  L  KM  N + PD  ++ + I G 
Sbjct: 591 MLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGF 650

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C+ G + +A  +F  +        + TY  L++G CKM R+  A  L   ++ KG  PDV
Sbjct: 651 CRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDV 710

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           VT + +I    + G +DKA ++L +M+    +P  +T+  L
Sbjct: 711 VTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 262/531 (49%), Gaps = 11/531 (2%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAK----NKQYDT--VVSLFKRLNSNGLFPDLFVLNL 121
            F+ M    P P + ++TI++    K        DT     + + +  NG  P +   + 
Sbjct: 236 LFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYST 295

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            I  LC++G    A   +  ++ +    N   +N +I+GLC +G + EA ++ +++    
Sbjct: 296 YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCG 355

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V T++ LI+G C+  +    L L EEM  ++  + +P +V+Y+S+  GLCK    D
Sbjct: 356 ISPDVYTYSILIHGFCKQGDVEKGLYLIEEM--KYSNM-EPSLVSYSSLFHGLCKKRLSD 412

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            + ++   +       +   Y+ LI GFC   D   A  L  EM+ N + PD   F +++
Sbjct: 413 ISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLV 472

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK G          +M++ G+ P   T N ++D  C  GR+  A  L   M ++G  
Sbjct: 473 HGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIF 532

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            ++++YN +IN  CK++K E A+ L+  ML   + PSV+ Y+TL+ G  +  N   AL L
Sbjct: 533 PNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALML 592

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
             +M    V PD   +   I+ LC    + EA  +F+ +          +Y  +I G C+
Sbjct: 593 YARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCR 652

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
           +G ++ A  LF+ +  +G +P VVT ++++   CK  ++D A+ L+ +M+ K   P  VT
Sbjct: 653 IGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVT 712

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           +  L+    +     K + +L++M  E  V+ D  ++  +++ L K KK +
Sbjct: 713 YNVLIAAHRRRGNLDKALEMLNEM-KENGVLPD-HMTYMMLEWLLKAKKLK 761



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 250/485 (51%), Gaps = 9/485 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI------TSGAFVVLG 140
           LL  LA+  + + + SLF+ + S G  P++F   +++N  CK         T  A  +L 
Sbjct: 220 LLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILE 279

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            + R+  +P  VT++  I GLC  G +  A    + L       NV  +N +I+GLC+  
Sbjct: 280 EMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKG 339

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               ALK+ EEM +       PDV TY+ +I G CK G V+K   L+ +MK  N+ P+++
Sbjct: 340 ELDEALKVLEEMKS---CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLV 396

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           +Y+SL  G C       +  +F ++   G + D   ++ +I   C  G +D  ++L+E M
Sbjct: 397 SYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEM 456

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           ++  + PD   + SL+ GFC +G    A E F  M+  G    + + N++I+A+C++ +V
Sbjct: 457 VRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRV 516

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           E+A+ L  EM ++ I P++ TYN +++ L +      AL+L   M   +V+P    ++T 
Sbjct: 517 EEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTL 576

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           IDG  K     +A+ ++  +        +  Y  LIN LC   R+  A  LF ++   G 
Sbjct: 577 IDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGM 636

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            PD ++ +++I   C+ G M KA  L  +M  +  +P+ VT+ +L+ G+ + N+     +
Sbjct: 637 TPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADM 696

Query: 561 LLHKM 565
           L+ +M
Sbjct: 697 LIDEM 701



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 244/552 (44%), Gaps = 29/552 (5%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK---------R 106
           KS N      + F   M K   S  + +F  ++ +LA    +  V +L +          
Sbjct: 99  KSLNWEVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVN 158

Query: 107 LNSNGLFPDLF-----------VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           L++  LFP L            V +LLI       +   A  V  +  ++    +T + N
Sbjct: 159 LDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCN 218

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR------NTLVALKLF 209
           FL+  L    R      LF+++      PNV T+  ++N  C+        +T  A ++ 
Sbjct: 219 FLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEIL 278

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           EEM     +   P VVTY++ I GLC+ G+V+ A + +  +   N   NV  YN++I G 
Sbjct: 279 EEMERNGES---PTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGL 335

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C   +  EA  +  EM   G+ PDV T++ +I+  CK G ++K   L+E M    + P  
Sbjct: 336 CKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSL 395

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           V+Y+SL  G C       + ++F  + + G ++D  +Y+ILI   C    ++ A  L  E
Sbjct: 396 VSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEE 455

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M+   + P    + +L+ G  ++G   +AL+  + M    ++P   T    ID  C+ G 
Sbjct: 456 MVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGR 515

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           V EA+ +   ++       + TYN +IN LCK  + + A +LF  +  +  +P VV  ST
Sbjct: 516 VEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYST 575

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I    K+    KA  L   M      P  V +  L+      ++  +   L  KM    
Sbjct: 576 LIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENG 635

Query: 570 LVVSDLSLSSKV 581
           +    +S +S +
Sbjct: 636 MTPDKISYTSVI 647



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 213/462 (46%), Gaps = 25/462 (5%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F+ +   F  ++N L   G  ME         V+A   ++V +   +N        L A 
Sbjct: 120 FSRSIDAFRTVVNVLALAGMHME---------VYALLRDIVCYYNKVN--------LDAF 162

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +LF  ++ E        V+ ++ +I     +  ++ A ++ LQ K   +  +  + N L+
Sbjct: 163 ELFPILL-ESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLL 221

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD--GKMD----KVNRLLELM 320
                 +  +  + LF EM   G  P+V T+  M+N+ CK   G+ D    +   +LE M
Sbjct: 222 KCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEM 281

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            + G +P  VTY++ + G C VG +  A +   S++S     +VY YN +I+  CK  ++
Sbjct: 282 ERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGEL 341

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A+ +  EM S  I P V TY+ L+ G  + G++   L LI++M+ +++ P   ++++ 
Sbjct: 342 DEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSL 401

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
             GLCK      ++ +F+ +     +     Y+ LI G C  G L +A KL   +     
Sbjct: 402 FHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNL 461

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            PD     +++H  CK G    A +    M     +PS  T   ++    +  +  + + 
Sbjct: 462 APDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALN 521

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           L+++M  +  +  +L   + V++ L K++K    L  F  +L
Sbjct: 522 LMNEMQTQG-IFPNLFTYNAVINRLCKERKSERALELFPLML 562


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 247/507 (48%), Gaps = 56/507 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVL 119
            +A + FD +++      +      L  +A++      VS + R+   G   + PDL   
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGADEVTPDLCTY 90

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLN 178
            +LI C C+ G     F  LG +++  F    +TF  L+ GLCA+ R  +A  +  +++ 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C PNV ++N L+NGLC    +  AL+L   M ++ G    PDVV+Y ++I+G  K+G
Sbjct: 151 ELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFC---CVDD-WK--------EAKCLFIEMM 286
             DKA     +M DR I P+V+TY+S+I   C    +D  W         E++ LF  M+
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMV 270

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             GV+PD++T++ +I+  C  GKMD+  +LL  M+  G+ P+TVTY++L++G+C + R+ 
Sbjct: 271 RIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 330

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  LF  M S G   D+ +YNI++    + ++   A  LY  +     +  + TYN +L
Sbjct: 331 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 390

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL                                   CKN    +A+Q+FQ +  C  +
Sbjct: 391 HGL-----------------------------------CKNKLTDDALQMFQNL--CLMD 413

Query: 467 LRIE--TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           L++E  T+N +I+ L K+GR   A  LF      G +P+  T   M   +  +G +++ +
Sbjct: 414 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 473

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            L L ME   C         ++R  +Q
Sbjct: 474 QLFLSMEDNGCTVDSGMLNFIVRELLQ 500



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 191/417 (45%), Gaps = 54/417 (12%)

Query: 83  SFTILLTML-AKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           +FT LL  L A  +  D +  + +R+   G  P++F  N L+N LC    +  A  +L  
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHM 183

Query: 142 ILR---SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +         P+ V++  +ING   EG   +A   + ++      P+VVT++++I  LC+
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 243

Query: 199 TR------------NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
            +              + + KLF+ MV   G   KPD++TY+++IDG C  G +D+A +L
Sbjct: 244 GQAMDKPWSHCKEGRVIESEKLFDLMV-RIG--VKPDIITYSTLIDGYCLAGKMDEAMKL 300

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L  M    + PN +TY++LI G+C +   ++A  LF EM  +GV PD++T+N ++    +
Sbjct: 301 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 360

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
             +      L   + + G   +  TYN ++ G C                          
Sbjct: 361 TRRTAAAKELYVRITESGTQIELSTYNIILHGLC-------------------------- 394

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
                    K++  +DA+ +++ +    ++    T+N ++  L +VG   +A  L     
Sbjct: 395 ---------KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 445

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            N +VP+ +T+    + +   G + E  Q+F ++ +  C +     N ++  L + G
Sbjct: 446 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 502



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 159/348 (45%), Gaps = 21/348 (6%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM-DK 312
            + P++ TY  LI   C              ++  G + + +TF  ++   C D +  D 
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV---SKGCRHDVYSYNI 369
           ++ +L  M + G  P+  +YN+L++G C   R   A EL   M      G   DV SY  
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ------------VGNLGD 417
           +IN   K+   + A   Y EML   I P V+TY+++++ L +             G + +
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIE 261

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           + KL D M    V PD  T++T IDG C  G + EA+++   + +   +    TY+ LIN
Sbjct: 262 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 321

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G CK+ R++ A  LF  ++  G  PD++T + ++  L +  +   A +L + +       
Sbjct: 322 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 381

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
              T+  +L G  +N      + +      + L + DL L ++  +++
Sbjct: 382 ELSTYNIILHGLCKNKLTDDALQMF-----QNLCLMDLKLEARTFNIM 424



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 17/256 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +  +E    FD M+++   P + +++ L+       + D  + L   + S GL P+
Sbjct: 255 KEGRVIESEK--LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN 312

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               + LIN  CK+     A V+   +  S  +P+ +T+N ++ GL    R   A  L+ 
Sbjct: 313 TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 372

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC----KPDVVTYNSII 231
           ++        + T+N +++GLC+ + T  AL++F+ +       C    K +  T+N +I
Sbjct: 373 RITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL-------CLMDLKLEARTFNIMI 425

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           D L K G  D+AK+L +      + PN  TY  +          +E   LF+ M DNG  
Sbjct: 426 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 485

Query: 292 PDVVTFNAMINYNCKD 307
            D    + M+N+  ++
Sbjct: 486 VD----SGMLNFIVRE 497


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 232/474 (48%), Gaps = 51/474 (10%)

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +LI    KMG+T  A    G +     TP+  T+N +++ L  +  ++ A  ++ ++   
Sbjct: 131 VLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKL 190

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            C PNV TF+ LI+GLC++ N   AL LF+EM    G +  PD  TY  +I GLC+   V
Sbjct: 191 NCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQR-GIL--PDAFTYCVVISGLCRSKRV 247

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA---------------------- 278
           D A  L  +MKD  + P+ +T N+L+ GFC +D   EA                      
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307

Query: 279 -------------KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
                        + L+ +M+++ V+PDV  +  M+    + GK+     LL  M + GV
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PDTV YN L+ GFC +G +S AR L + +    C  +V +Y+ILI+  C++    DA  
Sbjct: 368 VPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQE 427

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN-------------DVVP 432
           ++ EM      PS +T+N+L+ GL + G L  A  L  KM++                V 
Sbjct: 428 IFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVL 487

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           DS +    ++ LC +G + +A ++   + +      I TYN L+NG CK+G    A KLF
Sbjct: 488 DSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLF 547

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
             +Q KG  PD VT  T+I+ L +  + + A  +   ME   C P    + T++
Sbjct: 548 REMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMM 601



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 150/564 (26%), Positives = 260/564 (46%), Gaps = 63/564 (11%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSGN+   +A++ FD M +    P   ++ ++++ L ++K+ D    LF ++  +G+ PD
Sbjct: 208 KSGNV--KDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPD 265

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N L+N  C +     AF +L    +  +  +   ++ LI GL    R  +   L++
Sbjct: 266 FVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYR 325

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+      P+V  +  ++ GL        AL+L  EM  E G +  PD V YN +I G C
Sbjct: 326 KMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEM-TESGVV--PDTVCYNVLIKGFC 382

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
             G + +A+ L L++   +  PNV TY+ LI G C     ++A+ +F EM   G  P  V
Sbjct: 383 DMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAV 442

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNP--------------DTVTYNSLMDGFCL 341
           TFN++I+  CK G+++K + LL   ++ G NP              D+ +   +++  C 
Sbjct: 443 TFNSLIDGLCKTGQLEKAH-LLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCD 501

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G I +A  + + +   G    +Y+YNIL+N  CK      A  L+REM  + + P  +T
Sbjct: 502 SGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVT 561

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAI 460
           Y TL++GL +     DA K+ D+M+ N   PD+  + T +  +C+   +  A  ++ + +
Sbjct: 562 YGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYL 621

Query: 461 RNCKCE---------------------------------LRIETYNCLINGLCKMGRLKT 487
           RN + +                                   +  Y   + GLC+  R+  
Sbjct: 622 RNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGE 681

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A K+F  L+    +     C  +I++L KEG +D+A D+ L    K           LLR
Sbjct: 682 ALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKG---------YLLR 732

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLV 571
             V N   +K+V    +M  ++ +
Sbjct: 733 RRVANRILTKLVRRKGEMGKDRAI 756



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/356 (33%), Positives = 192/356 (53%), Gaps = 12/356 (3%)

Query: 188 TFNTLINGLCRTRNT--LVALKLFEEM------VNEFGAI----CKPDVVTYNSIIDGLC 235
           T   L NG  +  N    V +K++ +M      +  FG++    C PDV TYN I+D L 
Sbjct: 113 TLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLI 172

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           +  F+  A  +  +M   N  PNV T++ LI G C   + K+A  LF EM   G+ PD  
Sbjct: 173 QKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAF 232

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+  C+  ++D   RL + M   GV PD VT N+L++GFC++ R+  A  L    
Sbjct: 233 TYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLF 292

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              G   DV  Y+ LI    + ++ ED   LYR+M+ + ++P V  Y  ++ GL + G +
Sbjct: 293 EKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKV 352

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            DAL+L+++M  + VVPD+  +   I G C  G + EA  +   I    C   ++TY+ L
Sbjct: 353 RDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSIL 412

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           I+G+C+ G  + A ++F+ ++  G  P  VT +++I  LCK GQ++KA+ L   ME
Sbjct: 413 ISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKME 468



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 200/410 (48%), Gaps = 16/410 (3%)

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            F  LI      G   +A   F  +  F C P+V T+N +++ L +    L+AL ++  M
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           +      C P+V T++ +IDGLCK G V  A  L  +M  R I P+  TY  +I G C  
Sbjct: 188 MK---LNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRS 244

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
               +A  LF +M D+GV PD VT NA++N  C   ++D+   LL L  + G   D   Y
Sbjct: 245 KRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGY 304

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           + L+ G     R    + L+  M+    + DVY Y I++    +  KV DA+ L  EM  
Sbjct: 305 SCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTE 364

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             + P  + YN L+ G   +G L +A  L  ++  +D  P+  T++  I G+C+NG   +
Sbjct: 365 SGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRD 424

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ-----------HKGP- 500
           A ++F  +    C     T+N LI+GLCK G+L+ A  LF++++            +GP 
Sbjct: 425 AQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPS 484

Query: 501 -IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            + D  +   M+  LC  G + KA  +L+ +      P   T+  L+ GF
Sbjct: 485 HVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGF 534



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 210/441 (47%), Gaps = 16/441 (3%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+  +  M+K+   P + +F+IL+  L K+      + LF  +   G+ PD F   ++I+
Sbjct: 180 ALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVIS 239

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LC+      A+ +  ++  S   P+ VT N L+NG C   R+ EA  L +         
Sbjct: 240 GLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVL 299

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V  ++ LI GL R +       L+ +M+ +     KPDV  Y  ++ GL + G V  A 
Sbjct: 300 DVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDN---VKPDVYLYTIMMKGLAEAGKVRDAL 356

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           ELL +M +  + P+ + YN LI GFC +    EA+ L +E+  +   P+V T++ +I+  
Sbjct: 357 ELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGM 416

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM--------- 355
           C++G       +   M + G  P  VT+NSL+DG C  G++ +A  LF  M         
Sbjct: 417 CRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLF 476

Query: 356 --VSKGCRH--DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
             +S+G  H  D  S   ++   C    +  A  +  ++      P + TYN L++G  +
Sbjct: 477 LRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCK 536

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
           +GN   A KL  +MQ   + PD+ T+ T I+GL +     +A +VF  +    C      
Sbjct: 537 LGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAV 596

Query: 472 YNCLINGLCKMGRLKTACKLF 492
           Y  ++  +C+   L  A  L+
Sbjct: 597 YRTMMTWMCRRMELPRAFSLW 617



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 1/274 (0%)

Query: 277 EAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           E  C  +E + NG ++     F  +I    K G  DK       M      PD  TYN +
Sbjct: 108 ELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMI 167

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +D       +  A  ++  M+   C  +V +++ILI+  CK   V+DA+ L+ EM    I
Sbjct: 168 LDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGI 227

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P   TY  ++SGL +   + DA +L DKM+ + V PD  T    ++G C    V EA  
Sbjct: 228 LPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFS 287

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           + +        L +  Y+CLI GL +  R +    L+ ++      PDV   + M+  L 
Sbjct: 288 LLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLA 347

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           + G++  A +LL +M     VP  V +  L++GF
Sbjct: 348 EAGKVRDALELLNEMTESGVVPDTVCYNVLIKGF 381



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 1/258 (0%)

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           LE +   G+      +  L+  +  +G   +A E F SM    C  DVY+YN++++   +
Sbjct: 114 LEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQ 173

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
              +  A+ +Y  M+     P+V T++ L+ GL + GN+ DAL L D+M    ++PD+FT
Sbjct: 174 KNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFT 233

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   I GLC++  V +A ++F  +++        T N L+NG C + R+  A  L    +
Sbjct: 234 YCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFE 293

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G + DV   S +I  L +  + +    L   M   N  P    +  +++G  +  K  
Sbjct: 294 KDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVR 353

Query: 557 KVVVLLHKMAAEKLVVSD 574
             + LL++M  E  VV D
Sbjct: 354 DALELLNEM-TESGVVPD 370


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 240/473 (50%), Gaps = 6/473 (1%)

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           ++ F+ +  +G+ PD+   N ++  L           V G +L+    P  VT+N L++ 
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246

Query: 161 LCAEGRIMEAARLFKKLNVFAC--DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
              EGR  EA+ L K++         N VTFN +I+ L R  +   A+KL + M      
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLS--- 303

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
             K    TYN +I  L + GFV KA+ L ++M++  I P V+TYN++I G    +  + A
Sbjct: 304 -KKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAA 362

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           +  F EM   G+ PDV+T+N+++N  CK G + +   LL  + + G+ P  +TYN+L+DG
Sbjct: 363 QVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDG 422

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C +G ++ AR L   MV +GC  DV +Y IL+N + K + +  A   + EMLS+ ++P 
Sbjct: 423 YCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPD 482

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              YNT +     + +   A +L + M L  + PD+ T+   IDGLCK G + +A ++  
Sbjct: 483 CFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKT 542

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            + +   +    TY CLI+  C+ G L+ A KL + +   G  P VVT + ++H  C+ G
Sbjct: 543 KMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRG 602

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +  A      M      P+E+T+  L+       +        H+M    L 
Sbjct: 603 NLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLA 655



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 240/481 (49%), Gaps = 6/481 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           +L +L    ++D V +++  +    + P +   N L++   K G    A ++L  +    
Sbjct: 208 VLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQG 267

Query: 147 --FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
             F+ N VTFN +I+ L  EG +  A +L   + + +   +  T+N LI  L        
Sbjct: 268 GGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRL-SKKASSFTYNPLITALLERGFVRK 326

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A  L  EM NE G +  P VVTYN+II GL K    + A+    +M+   + P+VITYNS
Sbjct: 327 AEALQMEMENE-GIM--PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNS 383

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+  +C   + KEA  L  ++   G+ P V+T+N +I+  C+ G + +  RL E M+++G
Sbjct: 384 LLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQG 443

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD  TY  LM+G   V  ++ ARE F  M+SKG + D ++YN  I A         A 
Sbjct: 444 CFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAF 503

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L   M+ + I P  +TYN ++ GL + GNL DA +L  KM  + + PD  T+   I   
Sbjct: 504 QLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAH 563

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C+ G + EA ++   + +   +  + TY  L++  C+ G L +A   F ++   G  P+ 
Sbjct: 564 CERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNE 623

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +T + +IH LC  G+   A     +M  +   P++ T+  L+ G  +    +  + L  +
Sbjct: 624 ITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFE 683

Query: 565 M 565
           M
Sbjct: 684 M 684



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 247/514 (48%), Gaps = 11/514 (2%)

Query: 42  KDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVV 101
           +D   + + L D  +  ++    AVY    M++++  P + ++  LL    K  + D   
Sbjct: 203 RDCNRVLRVLRDAARWDDV---RAVY--GEMLQLRVEPTIVTYNTLLDSFLKEGRKDEAS 257

Query: 102 SLFKRLNSNGLFPDL--FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
            L K + + G    L     N++I+ L + G    A V L   +R     ++ T+N LI 
Sbjct: 258 MLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENA-VKLVDSMRLSKKASSFTYNPLIT 316

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
            L   G + +A  L  ++      P VVT+N +I+GL +      A   F EM    G +
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEM-RAMGLL 375

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             PDV+TYNS+++  CK G + +A  LL  ++   + P V+TYN+LI G+C + D  EA+
Sbjct: 376 --PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEAR 433

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L  EM++ G  PDV T+  ++N + K   +       + M+ +G+ PD   YN+ +   
Sbjct: 434 RLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAE 493

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
             +     A +L   M+ KG   D  +YN++I+  CK   ++DA  L  +M+S+ ++P  
Sbjct: 494 LTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDC 553

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           ITY  L+    + G L +A KL++ M  + + P   T+   +   C+ G +  A   F+ 
Sbjct: 554 ITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRK 613

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           + +   E    TYN LI+ LC  GR   A + FH +  +G  P+  T + +I   C+EG 
Sbjct: 614 MLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGN 673

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
              A  L  +M      P   T   L +GF + +
Sbjct: 674 WADAIRLYFEMHQNGIPPDYCTHNALFKGFDEGH 707



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 13/230 (5%)

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   DV   N ++       + +D   +Y EML  R+ P+++TYNTLL    + G   +A
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 419 LKLIDKMQ-------LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
             L+ +M+       LNDV     TF   I  L + G +  AV++  ++R  K      T
Sbjct: 257 SMLLKEMETQGGGFSLNDV-----TFNVVISFLAREGHLENAVKLVDSMRLSKKASSF-T 310

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN LI  L + G ++ A  L   ++++G +P VVT + +IH L K  Q + A     +M 
Sbjct: 311 YNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMR 370

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           A   +P  +T+ +LL  + +     + + LL  +    L  + L+ ++ +
Sbjct: 371 AMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLI 420


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 152/507 (29%), Positives = 266/507 (52%), Gaps = 16/507 (3%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLC 127
           FD M+K+  S  + +F +L+       + +  + + +R+ S   + PD    N ++  + 
Sbjct: 192 FDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMS 251

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA---ARLFKKLNVFACDP 184
           K G  S    +L  + R+   PN VT+N L+ G C  G + EA     L K+ N+    P
Sbjct: 252 KKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNIL---P 308

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           ++ T+N LING+C   +    L+L + M +      +PDVVTYN++IDG  + G   +AK
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKS---LKLQPDVVTYNTLIDGCFELGLSLEAK 365

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-NGVQPDVVTFNAMINY 303
           +L+ QM++  + PN +T+N  +   C  +  +E      E+++ +G  PD+VT++ +I  
Sbjct: 366 KLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKA 425

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G +     ++  M Q+G+  +T+T N+++D  C   ++  A  L  S   +G   D
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVD 485

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y  LI    +++KVE A  ++ EM   +I P+V T+N+L+ GL   G    A++  D
Sbjct: 486 EVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFD 545

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC--LINGLCK 481
           ++  + ++PD  TF + I G CK G V +A + +    + K   + + Y C  L+NGLCK
Sbjct: 546 ELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYN--ESIKHSFKPDNYTCNILLNGLCK 603

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G  + A   F+ L  +  + D VT +TMI   CK+ ++ +A DLL +ME K   P   T
Sbjct: 604 EGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFT 662

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           + +++   +++ K S+   LL K + +
Sbjct: 663 YNSIITSLMEDGKLSEADELLKKFSGK 689



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 248/522 (47%), Gaps = 43/522 (8%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC---AEGRIMEA 170
           P   + ++ ++     G    A  V  +++R    PN +T N L+ GL    +   I  A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             +F  +       +V TFN L+NG C       AL + E MV+EF     PD VTYN+I
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFN--VNPDNVTYNTI 246

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           +  + K G +   K+LLL MK   + PN +TYN+L+ G+C +   KEA  +   M    +
Sbjct: 247 LKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNI 306

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PD+ T+N +IN  C  G + +   L+++M    + PD VTYN+L+DG   +G    A++
Sbjct: 307 LPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKK 366

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGL 409
           L   M + G + +  ++NI +   CK++K E+     +E++      P ++TY+TL+   
Sbjct: 367 LMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAY 426

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN----------------GFVLEA 453
            +VG+L  AL+++ +M    +  ++ T  T +D LCK                 G++++ 
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDE 486

Query: 454 V-------------------QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           V                   +++  ++  K    + T+N LI GLC  G+ + A + F  
Sbjct: 487 VTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDE 546

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           L   G +PD  T +++I   CKEG+++KA +   +    +  P   T   LL G  +   
Sbjct: 547 LAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
             K +   + +  E+ V  D    + ++    KDKK +E  +
Sbjct: 607 TEKALNFFNTLITEREV--DTVTYNTMISAFCKDKKLKEAYD 646



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 221/499 (44%), Gaps = 92/499 (18%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  +L  ++K  +   V  L   +  NGL P+    N L+   CK+G    AF +
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  + ++   P+  T+N LING+C  G I E   L   +      P+VVT+NTLI+G   
Sbjct: 298 VELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFE 357

Query: 199 TRNTLVALKLFEEMVNE------------FGAICK---------------------PDVV 225
              +L A KL E+M N+               +CK                     PD+V
Sbjct: 358 LGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIV 417

Query: 226 TY-----------------------------------NSIIDGLCKDGFVDKAKELLLQM 250
           TY                                   N+I+D LCK+  VD+A  LL   
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSA 477

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
             R    + +TY +LI G+   +  ++A  ++ EM    + P V TFN++I   C  GK 
Sbjct: 478 HKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKT 537

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           +      + + + G+ PD  T+NS++ G+C  GR+ +A E +   +    + D Y+ NIL
Sbjct: 538 ELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           +N  CK+   E A+  +  +++ER     +TYNT++S   +   L +A  L+ +M+   +
Sbjct: 598 LNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRL 656

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQ---------------------AIRNCKCELRI 469
            PD FT+ + I  L ++G + EA ++ +                     A    K EL+ 
Sbjct: 657 EPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKT 716

Query: 470 E--TYNCLINGLCKMGRLK 486
           E   Y+ +IN LC  GRLK
Sbjct: 717 EAIAYSDVINELCSRGRLK 735


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 233/465 (50%), Gaps = 10/465 (2%)

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
           V  GR LR    PNT+    LI       +  +A  LF +   FAC P V  F  LI+ L
Sbjct: 22  VAEGRPLR----PNTLVK--LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDIL 75

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
             +     A  +++++V +    C+ D   YN +I    + G +D A E+  +MK +   
Sbjct: 76  VNSGEFERAELVYKKLVQKG---CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSE 132

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+  TY  L+         +EA+  F  M++ G+ P++ T+N +++   K G++D    L
Sbjct: 133 PDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGL 192

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M +RG  P  VTYN L+D  C  GR+  AR+LF  M   GC  D Y+Y+ L+N   K
Sbjct: 193 FAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGK 252

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             +VE+A  ++REM+   +   ++ YN+LL+ L + GN+    KL+ +M      PD+F+
Sbjct: 253 SGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFS 312

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           F T +D L K      A +VF  +    C+  + +YN LI+   + G    A ++   + 
Sbjct: 313 FNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV 372

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G IP+  T +++IHWL  +GQ+D+A  +L +ME   C P  VT+  L+    +  +  
Sbjct: 373 EAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQ 432

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +   L  +M  + +    LS + + +D L+ D +  E L  F+ +
Sbjct: 433 RAARLFQQMKDKGVEPDTLSYAVR-IDGLAFDDRLDEALVLFKDM 476



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 206/414 (49%), Gaps = 3/414 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++ +L+    ++ Q D+ + +F+ +   G  PD +    L+N L K G    A      +
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L    TPN  T+N L++     G++  A  LF ++      P+VVT+N L++ LC     
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A KLF +M    G  C PD  TY+++++GL K G V++A ++  +M DR +  +++ Y
Sbjct: 222 GAARKLFHKMT---GDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNY 278

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           NSL+       +      L  EM   G  PD  +FN +++   K  K D    +   M++
Sbjct: 279 NSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVE 338

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G  PD ++YN L+D +   G  ++AR++   MV  G   +  +YN LI+    D +V++
Sbjct: 339 SGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDE 398

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  +  EM +   RP V+TYN L+  L + G    A +L  +M+   V PD+ ++A  ID
Sbjct: 399 AFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRID 458

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           GL  +  + EA+ +F+ ++   C +    Y  LI    + G  +   +L H  Q
Sbjct: 459 GLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQ 512



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 219/438 (50%), Gaps = 3/438 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S +A   F+       SP + +FT L+ +L  + +++    ++K+L   G   D F  N+
Sbjct: 46  SGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNV 105

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI    + G    A  +   +      P+  T+ FL+N L   GR+ EA   F  +    
Sbjct: 106 LIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG 165

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN+ T+N L++   +     +AL LF EM        +P VVTYN ++D LC  G V 
Sbjct: 166 LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG---FQPSVVTYNILLDALCSAGRVG 222

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A++L  +M     +P+  TY++L+ G       +EA  +F EM+D GV  D+V +N+++
Sbjct: 223 AARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLL 282

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
               K G MD+V +L++ M ++G +PD  ++N++MD      +   ARE+F  MV  GC+
Sbjct: 283 ATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCK 342

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D+ SYNILI++  +      A  +  EM+     P   TYN+L+  L   G + +A  +
Sbjct: 343 PDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAV 402

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           +++M+     PD  T+   +D L K G    A ++FQ +++   E    +Y   I+GL  
Sbjct: 403 LEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAF 462

Query: 482 MGRLKTACKLFHRLQHKG 499
             RL  A  LF  ++  G
Sbjct: 463 DDRLDEALVLFKDMKAVG 480



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 227/462 (49%), Gaps = 3/462 (0%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+T   +  +      LF +  S    P +     LI+ L   G    A +V  ++++  
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
              +   +N LI      G++  A  +F+++ +   +P+  T+  L+N L +      A 
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
             F+ M+ E G    P++ TYN ++D   K G +D A  L  +MK R   P+V+TYN L+
Sbjct: 156 SFFDAML-ERG--LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILL 212

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
              C       A+ LF +M  +G  PD  T++ ++N   K G++++ +++   M+ RGV 
Sbjct: 213 DALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVA 272

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            D V YNSL+      G + R  +L   M  KG   D +S+N +++A  K  K + A  +
Sbjct: 273 VDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREV 332

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           +  M+    +P +I+YN L+    + G+   A +++++M     +P++ T+ + I  L  
Sbjct: 333 FARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLAT 392

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           +G V EA  V + +    C   + TYN L++ L K G  + A +LF +++ KG  PD ++
Sbjct: 393 DGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLS 452

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +  I  L  + ++D+A  L  DM+A  C   +  +  L+R 
Sbjct: 453 YAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRA 494



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 179/341 (52%), Gaps = 5/341 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K+G +   EA  FFD M++   +P + ++ +L+    K  Q D  + LF  +  
Sbjct: 141 LVNALGKAGRV--QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR 198

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G  P +   N+L++ LC  G    A  +  ++     +P++ T++ L+NGL   GR+ E
Sbjct: 199 RGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEE 258

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A ++F+++       ++V +N+L+  L +  N     KL +EM  +      PD  ++N+
Sbjct: 259 AHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKG---FHPDAFSFNT 315

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           I+D L K    D A+E+  +M +    P++I+YN LI  +    D  +A+ +  EM++ G
Sbjct: 316 IMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG 375

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             P+  T+N++I++   DG++D+   +LE M   G  PD VTYN LMD     G   RA 
Sbjct: 376 FIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAA 435

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
            LF  M  KG   D  SY + I+    D ++++A+ L+++M
Sbjct: 436 RLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 68/150 (45%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A    + M++    P   ++  L+  LA + Q D   ++ + + + G  PD+   N 
Sbjct: 361 AAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNR 420

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++ L K G    A  +  ++      P+T+++   I+GL  + R+ EA  LFK +    
Sbjct: 421 LMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           C  +   +  LI    R  +T +  +L  E
Sbjct: 481 CPVDKAMYRILIRAAHRAGDTELEAQLKHE 510


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 265/524 (50%), Gaps = 6/524 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   +F I   +L +         L  +L S GL   +   N  ++ +     + G  +
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANN--SEGIEM 244

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            +        + NT ++N +I  LC  G++ EA RL  +++  +  P+VV+++T+I+G C
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                  ALKL ++M  +   + KP+  TYNSII  LCK G   +A+++L +M  + I P
Sbjct: 305 HLGELKKALKLMDDM--QIKGL-KPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + + Y +LI GF  +   + A   F EM+   + PD +T+  +I    + GK+ +   L 
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             MI RG+ PD VTY +L+D +C  G +  A  L   MV  G   ++ +Y  LI+  CK 
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +++ A  L  EM  + ++ +V  YN++++G+ + GN+  A+KL+ +M++  + PD+ T+
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T ID  C+ G + +A ++ Q + +   +  + T+N L+NG C +G L+   +L   +  
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           KG +PD +T +T++   C    M+    +   M  +   P   T+  L++G  +  +  K
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK-ARNLK 660

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
               L+K   EK  V  ++  + ++    K +K+ E    F  +
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEM 704



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 241/477 (50%), Gaps = 4/477 (0%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N++I  LC++G    A  +L ++     TP+ V+++ +I+G C  G + +A +L   + +
Sbjct: 262 NIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQI 321

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               PN  T+N++I  LC+   +  A K+  EM+++      PD V Y ++I G  K G 
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ---KIIPDNVVYTTLIHGFFKLGH 378

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           V  A +   +M  + I+P+ ITY +LI GF       E + LF EM+  G++PD VT+  
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  CK G+M     L   M+Q G+ P+ VTY +L+DG C  G +  A EL   M  KG
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + +V  YN ++N  CK   +E A+ L +EM    I P  ITY T++    ++G++  A 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           KL+ +M    + P   TF   ++G C  G + +  ++   +          TYN L+   
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C    + T  K++ R++++G  PD  T + +I   CK   + +A  L  +M  K  VP+ 
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
            ++  L++ F +  K  +   L  +M    L V+D  + +  VD+  ++      LN
Sbjct: 679 TSYNALIKRFYKKRKFXEARELFEEMRGHGL-VADGEIYNFFVDMCYEEGDVEITLN 734



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 234/459 (50%), Gaps = 3/459 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           S   TS+ I++  L +  +      L  +++     PD+   + +I+  C +G    A  
Sbjct: 255 SWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALK 314

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           ++  +      PN  T+N +I  LC  G+  EA ++ +++      P+ V + TLI+G  
Sbjct: 315 LMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFF 374

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  +   A K F+EM+++      PD +TY ++I G  + G V + + L  +M  R + P
Sbjct: 375 KLGHVRTANKWFDEMLSK---KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP 431

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + +TY +LI  +C   +   A  L  EM+  G+ P++VT+ A+I+  CK G++D  N LL
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M ++G+  +   YNS+++G C  G I +A +L   M   G   D  +Y  +I+A C+ 
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             ++ A  L +EML   ++P+V+T+N L++G   +G L D  +L+  M    +VPD+ T+
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T +   C    +    ++++ +RN        TYN LI G CK   LK A  L+  +  
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           KG +P V + + +I    K+ +  +A +L  +M     V
Sbjct: 672 KGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLV 710



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 212/426 (49%), Gaps = 3/426 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + S++ ++       +    + L   +   GL P+ +  N +I  LCK+G +  A  
Sbjct: 290 TPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEK 349

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VL  ++     P+ V +  LI+G    G +  A + F ++      P+ +T+ TLI G  
Sbjct: 350 VLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFG 409

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +    +    LF EM++      KPD VTY ++ID  CK G +  A  L  +M    + P
Sbjct: 410 QGGKVIEPQNLFHEMISRG---LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N++TY +LI G C   +   A  L  EM   G+Q +V  +N+M+N  CK G +++  +L+
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M   G++PD +TY +++D +C +G I +A +L   M+ +G +  V ++N+L+N  C  
Sbjct: 527 KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             +ED   L   ML + I P  ITYNTL+       ++    K+  +M+   V PDS T+
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I G CK   + EA  +++ +        + +YN LI    K  +   A +LF  ++ 
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRG 706

Query: 498 KGPIPD 503
            G + D
Sbjct: 707 HGLVAD 712



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 185/357 (51%), Gaps = 3/357 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           +FD M+  K SP   ++T L+    +  +     +LF  + S GL PD      LI+  C
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    AF +   +++   TPN VT+  LI+GLC  G +  A  L  ++       NV 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            +N+++NG+C+  N   A+KL +EM  E   I  PD +TY ++ID  C+ G +DKA +LL
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEM--EVAGI-DPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M DR + P V+T+N L+ GFC +   ++   L   M++ G+ PD +T+N ++  +C  
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             M+   ++ + M  +GV PD+ TYN L+ G C    +  A  L+  M+ KG    V SY
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSY 681

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           N LI    K +K  +A  L+ EM    +      YN  +   ++ G++   L L D+
Sbjct: 682 NALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 204/389 (52%), Gaps = 3/389 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S EA      M+  K  P    +T L+    K     T    F  + S  + PD      
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTT 403

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI    + G       +   ++     P+ VT+  LI+  C  G ++ A  L  ++    
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN+VT+  LI+GLC+      A +L +EM  +     + +V  YNS+++G+CK G ++
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG---LQLNVCIYNSMVNGICKAGNIE 520

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A +L+ +M+   I+P+ ITY ++I  +C + D  +A  L  EM+D G+QP VVTFN ++
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N  C  G ++  +RLL  M+++G+ PD +TYN+LM   C+   ++   +++  M ++G  
Sbjct: 581 NGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YNILI  +CK + +++A  LY+EM+ +   P+V +YN L+   ++     +A +L
Sbjct: 641 PDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAREL 700

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
            ++M+ + +V D   +  ++D   + G V
Sbjct: 701 FEEMRGHGLVADGEIYNFFVDMCYEEGDV 729


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 253/542 (46%), Gaps = 59/542 (10%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           + +  M+    +P   +F +L+  L  +   D    LF  +   G  P+ F   +L+   
Sbjct: 133 WLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY 192

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           CK G+T     +L  +      PN V +N +++  C EGR  ++ ++ +K+      P++
Sbjct: 193 CKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDI 252

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           VTFN+ I+ LC+    L A ++F +M ++E+  + +P+ +TYN ++ G CK G ++ AK 
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312

Query: 246 L-----------------------------------LLQMKDRNINPNVITYNSLICGFC 270
           L                                   L QM D+ I P++ +YN L+ G C
Sbjct: 313 LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            +    +AK +   M  NGV PD VT+  +++  C  GK+D    LL+ M++    P+  
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           T N L+     +GRIS A EL   M  KG   D  + NI+++  C   +++ A+ + + M
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492

Query: 391 -----------------------LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
                                  +     P +ITY+TLL+GL + G   +A  L  +M  
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + PDS  +  +I   CK G +  A +V + +    C   +ETYN LI GL    ++  
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
              L   ++ KG  P++ T +T I +LC+  +++ A +LL +M  KN  P+  +F  L+ 
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672

Query: 548 GF 549
            F
Sbjct: 673 AF 674



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 262/553 (47%), Gaps = 35/553 (6%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  + +LL    K ++ + V  L+K +   G+ P  +  NLLI  LC       A  +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +      PN  TF  L+ G C  G   +   L   +  F   PN V +NT+++  CR
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK-DRNIN- 256
                 + K+ E+M  E G +  PD+VT+NS I  LCK+G V  A  +   M+ D  +  
Sbjct: 230 EGRNDDSEKMVEKMREE-GLV--PDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286

Query: 257 --PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PN ITYN ++ GFC V   ++AK LF  + +N     + ++N  +    + GK  +  
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            +L+ M  +G+ P   +YN LMDG C +G +S A+ +   M   G   D  +Y  L++  
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   KV+ A  L +EM+     P+  T N LL  L+++G + +A +L+ KM       D+
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDT 466

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIR-------------------------NCKCELRI 469
            T    +DGLC +G + +A+++ + +R                         NC  +L  
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI- 525

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY+ L+NGLCK GR   A  LF  +  +   PD V  +  IH  CK+G++  A  +L D
Sbjct: 526 -TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           ME K C  S  T+ +L+ G    N+  ++  L+ +M  EK +  ++   +  +  L + +
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM-KEKGISPNICTYNTAIQYLCEGE 643

Query: 590 KYRECLNQFRHLL 602
           K  +  N    ++
Sbjct: 644 KVEDATNLLDEMM 656



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/460 (30%), Positives = 233/460 (50%), Gaps = 33/460 (7%)

Query: 141 RILRSCFT---PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +++RS F    P+   +N L+     E R+   + L+K + +    P   TFN LI  LC
Sbjct: 99  QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALC 158

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            +     A +LF+EM  +    CKP+  T+  ++ G CK G  DK  ELL  M+   + P
Sbjct: 159 DSSCVDAARELFDEMPEKG---CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLP 215

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL- 316
           N + YN+++  FC      +++ +  +M + G+ PD+VTFN+ I+  CK+GK+   +R+ 
Sbjct: 216 NKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIF 275

Query: 317 --LELMIQRGV-NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             +EL    G+  P+++TYN ++ GFC VG +  A+ LF S+        + SYNI +  
Sbjct: 276 SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQG 335

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             +  K  +A  + ++M  + I PS+ +YN L+ GL ++G L DA  ++  M+ N V PD
Sbjct: 336 LVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPD 395

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           + T+   + G C  G V  A  + Q +    C     T N L++ L KMGR+  A +L  
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK-------------------- 533
           ++  KG   D VTC+ ++  LC  G++DKA +++  M                       
Sbjct: 456 KMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSL 515

Query: 534 ---NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
              NC+P  +T+ TLL G  +  + ++   L  +M  EKL
Sbjct: 516 IENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 250/503 (49%), Gaps = 30/503 (5%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   F+ + +      + S+ I L  L ++ ++    ++ K++   G+ P ++  N+L+
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK+G+ S A  ++G + R+   P+ VT+  L++G C+ G++  A  L +++    C 
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL 428

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T N L++ L +      A +L  +M NE G     D VT N I+DGLC  G +DKA
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKM-NEKGYGL--DTVTCNIIVDGLCGSGELDKA 485

Query: 244 KELLLQMK-----------------------DRNINPNVITYNSLICGFCCVDDWKEAKC 280
            E++  M+                       + N  P++ITY++L+ G C    + EAK 
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF EMM   +QPD V +N  I++ CK GK+    R+L+ M ++G +    TYNSL+ G  
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
           +  +I     L   M  KG   ++ +YN  I   C+ +KVEDA  L  EM+ + I P+V 
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           ++  L+    +V +  D  + + +  ++        ++   + L   G +L+A ++ +A+
Sbjct: 666 SFKYLIEAFCKVPDF-DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAV 724

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            +   EL    Y  L+  LCK   L+ A  + H++  +G   D      +I  L K G  
Sbjct: 725 LDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNK 784

Query: 521 DKAN---DLLLDMEAKNCVPSEV 540
            +AN   D +++M +   V ++V
Sbjct: 785 KEANSFADKMMEMASVGEVANKV 807



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 139/323 (43%), Gaps = 13/323 (4%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN+ ++      D +I+    P + +++ LL  L K  ++    +LF  +    L PD  
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV 560

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N+ I+  CK G  S AF VL  + +     +  T+N LI GL  + +I E   L  ++
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 PN+ T+NT I  LC       A  L +EM+ +  A   P+V ++  +I+  CK 
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA---PNVFSFKYLIEAFCKV 677

Query: 238 GFVDKAKELL---LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
              D A+E+    + +  +      + +N L+     +    +A  L   ++D G +   
Sbjct: 678 PDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLL----KATELLEAVLDRGFELGT 733

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
             +  ++   CK  +++  + +L  MI RG   D      ++DG   +G    A      
Sbjct: 734 FLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADK 793

Query: 355 MVSKGCRHDVYSYNILINANCKD 377
           M+      +V +    ++ N +D
Sbjct: 794 MMEMASVGEVANK---VDPNARD 813


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 248/500 (49%), Gaps = 3/500 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI+  P P   +F I++    +        SL   +      PD++  N+LIN     G 
Sbjct: 269 MIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGR 328

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           TS A   L  ++++   P+ +TF+ +I   C EG ++EA ++F+ +      PNV  +NT
Sbjct: 329 TSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNT 388

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++G  + R+   A  L+EEM ++  A   PD  T+N ++ G  K G    + EL     
Sbjct: 389 LMSGYFKARDVCQANMLYEEMRDKGIA---PDGATFNILVAGNYKYGKEADSYELFRDWS 445

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             ++ P+   Y+  + G C      EA     +M++ G+ P VV FN++I    + G  D
Sbjct: 446 LSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFED 505

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
             ++  ++M+  G+ P + T +S++ G    GR+  AR+L   M+ KG   +  ++ +L+
Sbjct: 506 NAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLL 565

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +   K      A  L+ EM +  I P  I ++  + GL + G + +A +   +M     V
Sbjct: 566 DGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFV 625

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P++F + + I GLC  G + EA+++ + +R       I T N +ING CK GR+K+A   
Sbjct: 626 PNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDA 685

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F  + H G  PD VT +T+I   CK   M  A++ L  M A    P   T+   ++GF  
Sbjct: 686 FAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCS 745

Query: 552 NNKKSKVVVLLHKMAAEKLV 571
           + K S+ V +L ++ A  +V
Sbjct: 746 SQKISRAVTMLDELIAVGVV 765



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 233/479 (48%), Gaps = 10/479 (2%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           T I  F N+    GN+   EA   F+ + ++  SP +  +  L++   K +       L+
Sbjct: 353 TIITAFCNE----GNVV--EARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLY 406

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
           + +   G+ PD    N+L+    K G  + ++ +      S   P+   ++  + GLC  
Sbjct: 407 EEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWA 466

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           G++ EA +  + +      P+VV FN++I    R      A K ++ M+  FG +  P  
Sbjct: 467 GQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIML-MFGLV--PSS 523

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
            T +S++ GL K G + +A++LL +M D+ +  N + +  L+ G+  V D   A  L+ E
Sbjct: 524 STCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYE 583

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M   G+ PD + F+A I+   K G +++       M ++G  P+   YNSL+ G C  G+
Sbjct: 584 MEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGK 643

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A +L   M  KG   D+++ NI+IN  CK+ +++ A   + EM    + P  +TYNT
Sbjct: 644 LHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNT 703

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ G  +V ++  A + ++KM  +   PD  T+   I G C +  +  AV +   +    
Sbjct: 704 LIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVG 763

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                 TYN ++N +C    L  A  L  +L     +P+VVT + ++   CK+G  +KA
Sbjct: 764 VVPNTVTYNTMMNAVCT-DMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 179/376 (47%), Gaps = 4/376 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  + + + +  L    Q D  +   + +   G+ P +   N +I    + G    A   
Sbjct: 451 PDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKA 510

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +L     P++ T + ++ GL  +GR+ EA  L  K+       N V F  L++G  +
Sbjct: 511 YKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFK 570

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +T  A  L+ EM  E   IC PD + +++ IDGL K G V++A E   +M  +   PN
Sbjct: 571 VGDTAGAHSLWYEM--EARGIC-PDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPN 627

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              YNSLI G C      EA  L  EM   G+ PD+ T N +IN  CK+G+M        
Sbjct: 628 NFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFA 687

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M   GV PDTVTYN+L+ G+C V  +  A E    M + G   D+ +YNI I   C  Q
Sbjct: 688 EMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQ 747

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K+  AV +  E+++  + P+ +TYNT+++ +     L  A+ L  K+     VP+  T  
Sbjct: 748 KISRAVTMLDELIAVGVVPNTVTYNTMMNAVC-TDMLDRAMVLTAKLLKMAFVPNVVTTN 806

Query: 439 TYIDGLCKNGFVLEAV 454
             +   CK G   +A+
Sbjct: 807 VLLSHFCKQGMPEKAL 822



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 177/416 (42%), Gaps = 36/416 (8%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           + D    N+++ G        ++ E+L +M++  + P+    + L      V D+     
Sbjct: 205 ESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWK 264

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L   M+ +G +P    FN MI   C+ G +     LL +M +    PD   YN L++ + 
Sbjct: 265 LLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYR 324

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
           + GR S A      M+  GC+  + +++ +I A C +  V +A  ++  +    + P+V 
Sbjct: 325 IRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVA 384

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            YNTL+SG F+  ++  A  L ++M+   + PD  TF   + G  K G   ++ ++F+  
Sbjct: 385 MYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDW 444

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV--------------- 505
                      Y+  + GLC  G+L  A +    +  KG  P VV               
Sbjct: 445 SLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFE 504

Query: 506 --------------------TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
                               TCS+M+  L K+G++ +A DLL  M  K    ++V F  L
Sbjct: 505 DNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVL 564

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L G+ +    +    L ++M A  +    ++ S+  +D LSK     E    F  +
Sbjct: 565 LDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSA-FIDGLSKAGLVEEAYEAFSEM 619



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 6/228 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + + F++   K+G +   EA   F  M K    P    +  L+  L    +    + 
Sbjct: 592 DAIAFSAFIDGLSKAGLV--EEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALK 649

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L + +   GL PD+F  N++IN  CK G    AF     +     TP+TVT+N LI G C
Sbjct: 650 LEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYC 709

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
               ++ A     K+     DP++ T+N  I G C ++    A+ + +E++   G +  P
Sbjct: 710 KVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELI-AVGVV--P 766

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           + VTYN++++ +C D  +D+A  L  ++      PNV+T N L+  FC
Sbjct: 767 NTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFC 813



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 1/111 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           F + M      P +T++ I +     +++    V++   L + G+ P+    N ++N +C
Sbjct: 720 FLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVC 779

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
              +   A V+  ++L+  F PN VT N L++  C +G   +A    +KLN
Sbjct: 780 T-DMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKALIWGQKLN 829


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 247/495 (49%), Gaps = 41/495 (8%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT-VTFNFLINGLCAEGRIMEAAR 172
           PD+ + N L+  LC+ G  + A     R++ +C +  T VT++ L +G C  GR+ EA R
Sbjct: 86  PDVALANRLVRDLCRRGRPADA----ARVVEACGSAATAVTYSALADGYCRVGRLDEARR 141

Query: 173 LFKKLNVF--------------------------------ACDPNVVTFNTLINGLCRTR 200
           +   + V                                  C P+VVT+N L+   C+ R
Sbjct: 142 VVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGR 201

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A++L + M  E    C P  VTYN I+DG+C++G VD A+ELL  +      PN +
Sbjct: 202 GYRQAMELIDLMRVEG---CTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTV 258

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            YN+++ G      W++ + L  EM      P   T + +I+  C++G   +  RLLE M
Sbjct: 259 NYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKM 318

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            +     + VTYN+++ G C  G +  A  L  +M + GC+ ++++YNIL+   C  ++ 
Sbjct: 319 SKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERW 378

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           EDA  L  +M      P ++T+NT++  L Q G    A+++  +M      P+S T+++ 
Sbjct: 379 EDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSV 438

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+GL K G + +++++   + +      I  Y+ L   L +  +L  A ++ H+LQ  G 
Sbjct: 439 IEGLAKTGKMEQSLELLNEMGSKGFNPEI-NYHLLAECLNEEDKLVEAIQMVHKLQDTGI 497

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P  V  +T++  LC+ G+ D+A D+L +M +  C+P E T+  L++G        +   
Sbjct: 498 SPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARE 557

Query: 561 LLHKMAAEKLVVSDL 575
           LL  +++  ++V +L
Sbjct: 558 LLSTLSSRDVIVDNL 572



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 198/387 (51%), Gaps = 9/387 (2%)

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P+V   N L+  LCR      A ++ E   +   A      VTY+++ DG C+ G +D
Sbjct: 84  CPPDVALANRLVRDLCRRGRPADAARVVEACGSAATA------VTYSALADGYCRVGRLD 137

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A+ ++  M    + P+   YN L+   C     ++A  L   M+  G  PDVVT+N ++
Sbjct: 138 EARRVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILL 194

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              CK     +   L++LM   G  P  VTYN +MDG C  G +  AREL  S+ S GC 
Sbjct: 195 EAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCT 254

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  +YN ++       + ED   L  EM SE   PS  T + ++S L Q G    A++L
Sbjct: 255 PNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRL 314

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ++KM  +D   +  T+   + GLC+ G V  A+ +   ++   C+  I TYN L+ GLC 
Sbjct: 315 LEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCN 374

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             R + A  L  ++     +PD++T +T+I +LC++G   +A ++   M  K C P+ VT
Sbjct: 375 AERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVT 434

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           + +++ G  +  K  + + LL++M ++
Sbjct: 435 YSSVIEGLAKTGKMEQSLELLNEMGSK 461



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 206/397 (51%), Gaps = 4/397 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M+    +P + ++ ILL    K + Y   + L   +   G  P     N+++
Sbjct: 170 DALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIM 229

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + +C+ G    A  +L  +     TPNTV +N ++ GL   GR  +   L  ++    C 
Sbjct: 230 DGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCP 289

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+  T + +I+ LC+      A++L E+M       C  ++VTYN+++ GLC+ G VD A
Sbjct: 290 PSEATLSVVISSLCQEGLFQRAIRLLEKMSKHD---CTANIVTYNAVVSGLCEQGHVDGA 346

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL  M+     PN+ TYN L+ G C  + W++A+ L  +M      PD++TFN +I +
Sbjct: 347 LYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGF 406

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G   +   + + M ++G  P++VTY+S+++G    G++ ++ EL   M SKG   +
Sbjct: 407 LCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE 466

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +Y++L     ++ K+ +A+ +  ++    I P  + YNT+L GL + G    A+ ++ 
Sbjct: 467 I-NYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILS 525

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            M  +  +PD  T++  I GL   G++ EA ++   +
Sbjct: 526 NMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTL 562



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 193/424 (45%), Gaps = 33/424 (7%)

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
           + P  +  N L++ LC  G    A V+L  +L     P+ VT+N L+   C      +A 
Sbjct: 148 VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAM 207

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF---------------------- 209
            L   + V  C P  VT+N +++G+CR  +   A +L                       
Sbjct: 208 ELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGL 267

Query: 210 ---------EEMVNE-FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                    EE++ E F   C P   T + +I  LC++G   +A  LL +M   +   N+
Sbjct: 268 RTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANI 327

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TYN+++ G C       A  L   M  +G +P++ T+N ++   C   + +    L+  
Sbjct: 328 VTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAK 387

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M Q    PD +T+N+++   C  G   +A E+F  M  KGC  +  +Y+ +I    K  K
Sbjct: 388 MSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGK 447

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +E ++ L  EM S+   P  I Y+ L   L +   L +A++++ K+Q   + P +  + T
Sbjct: 448 MEQSLELLNEMGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNT 506

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            + GLC+NG   +A+ +   + +  C     TY+ LI GL   G +K A +L   L  + 
Sbjct: 507 ILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRD 566

Query: 500 PIPD 503
            I D
Sbjct: 567 VIVD 570



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 167/332 (50%), Gaps = 20/332 (6%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P   ++  +L  L    +++ V  L   + S    P    L+++I+ LC+ G+   A  
Sbjct: 254 TPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIR 313

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L ++ +   T N VT+N +++GLC +G +  A  L   +    C PN+ T+N L+ GLC
Sbjct: 314 LLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLC 373

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                  A  L  +M       C PD++T+N+II  LC+ G   +A E+  QM ++   P
Sbjct: 374 NAERWEDAEDLMAKMSQ---TDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCP 430

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N +TY+S+I G       +++  L  EM   G       FN  INY+     +++ ++L+
Sbjct: 431 NSVTYSSVIEGLAKTGKMEQSLELLNEMGSKG-------FNPEINYHLLAECLNEEDKLV 483

Query: 318 EL--MIQR----GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           E   M+ +    G++P  V YN+++ G C  G+  +A ++  +MVS GC  D  +Y+ILI
Sbjct: 484 EAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILI 543

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
                +  +++A    RE+LS      VI  N
Sbjct: 544 QGLAHEGYMKEA----RELLSTLSSRDVIVDN 571



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 161/303 (53%), Gaps = 9/303 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   + +++++ L +   +   + L ++++ +    ++   N +++ LC+ G   GA  +
Sbjct: 290 PSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYL 349

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +      PN  T+N L+ GLC   R  +A  L  K++   C P+++TFNT+I  LC+
Sbjct: 350 LSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQ 409

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
              T+ A+++F++M  +    C P+ VTY+S+I+GL K G ++++ ELL +M  +  NP 
Sbjct: 410 KGLTMQAVEVFKQMPEKG---CCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE 466

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            I Y+ L       D   EA  +  ++ D G+ P  V +N ++   C++GK D+   +L 
Sbjct: 467 -INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILS 525

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN-ANCKD 377
            M+  G  PD  TY+ L+ G    G +  AREL  ++ S+    DV   N++ N A+  D
Sbjct: 526 NMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSR----DVIVDNLIKNDASLLD 581

Query: 378 QKV 380
           Q +
Sbjct: 582 QSI 584



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 140/275 (50%), Gaps = 6/275 (2%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+   + M K   +  + ++  +++ L +    D  + L   + ++G  P++F  N+L+ 
Sbjct: 311 AIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVK 370

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LC       A  ++ ++ ++   P+ +TFN +I  LC +G  M+A  +FK++    C P
Sbjct: 371 GLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCP 430

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N VT++++I GL +T     +L    E++NE G+      + Y+ + + L ++  + +A 
Sbjct: 431 NSVTYSSVIEGLAKTGKMEQSL----ELLNEMGSKGFNPEINYHLLAECLNEEDKLVEAI 486

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +++ +++D  I+P  + YN+++ G C      +A  +   M+ +G  PD  T++ +I   
Sbjct: 487 QMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGL 546

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYN--SLMD 337
             +G M +   LL  +  R V  D +  N  SL+D
Sbjct: 547 AHEGYMKEARELLSTLSSRDVIVDNLIKNDASLLD 581


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 254/512 (49%), Gaps = 3/512 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            F  +I+  P P   +F+ ++    +        SL   +      P+ F  N++IN  C
Sbjct: 253 LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 312

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
             G TS A      ++     P  VTFN +IN  C EG ++EA +LF  L      PN +
Sbjct: 313 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAI 372

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            +NTL+NG  + R    A  L+EEM  +  A   PD +T+N ++ G  K G  +    LL
Sbjct: 373 MYNTLMNGYVKMREIDQANMLYEEMRKKGIA---PDGITFNILVSGHYKYGREEDGDRLL 429

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             +    + P+   ++  + G C      EA    ++M++ G+ P ++ FN++I    + 
Sbjct: 430 KDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQA 489

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G  DK     +LM+  G+ P   T +SL+ G  + GR+  A EL   M+ KG   +  ++
Sbjct: 490 GLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAF 549

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
            +L++   K   V  A  L+ EM    I P V+ ++  + GL + G + +A  +  +M  
Sbjct: 550 TVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLR 609

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             ++P++F + + I G CK G + EA+++ + +R+      I T N +I GLCK GR+++
Sbjct: 610 KGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRS 669

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  +F  +   G  PD++T +T+I+  CK   M  A++L+  M A    P   T+   + 
Sbjct: 670 AINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIH 729

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           GF  + + ++ V++L ++ +  +V + ++ +S
Sbjct: 730 GFCSSRRMNRAVLMLDELVSAGIVPNTVTYNS 761



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 237/485 (48%), Gaps = 38/485 (7%)

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
            + +  R+   G+ P    + +L   L ++G     + +   ++R    P   TF+ +I 
Sbjct: 215 ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 274

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
           G C +G I     L   +  F C+PN   +N +IN  C    T  AL  F  M+ E G  
Sbjct: 275 GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMI-ERG-- 331

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C P VVT+N++I+  CK+G V +A++L   +K+   +PN I YN+L+ G+  + +  +A 
Sbjct: 332 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 391

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L+ EM   G+ PD +TFN +++ + K G+ +  +RLL+ +   G+ PD   ++  + G 
Sbjct: 392 MLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGL 451

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  GR+  A E  + M+ KG    + ++N +I A  +    + A   Y+ M+   + PS 
Sbjct: 452 CWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 511

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKM--------------------QLNDVV-------- 431
            T ++LL GL   G L +A +LI +M                    +  DVV        
Sbjct: 512 STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 571

Query: 432 -------PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
                  PD   F+ +IDGL K G V EA  VF  +           YN LI G CK G+
Sbjct: 572 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 631

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           L  A KL   ++H+G +PD+ T + +I  LCK+G+M  A ++ +DM      P  +T+ T
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 691

Query: 545 LLRGF 549
           L+ G+
Sbjct: 692 LINGY 696



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 238/505 (47%), Gaps = 4/505 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++A+ +F+ MI+   +P + +F  ++    K         LF  L   G  P+  + N 
Sbjct: 317 TSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNT 376

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N   KM     A ++   + +    P+ +TFN L++G    GR  +  RL K ++V  
Sbjct: 377 LMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLG 436

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+   F+  ++GLC       A++   +M+ +      P ++ +NS+I    + G  D
Sbjct: 437 LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKG---LSPSIIAFNSVIAAYSQAGLED 493

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA E    M    + P+  T +SL+ G       +EA  L  +M++ G+  + + F  ++
Sbjct: 494 KAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLL 553

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K G +     L   M +RG+ PD V +++ +DG    G +  A  +F+ M+ KG  
Sbjct: 554 DKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLI 613

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            + ++YN LI   CK  K+ +A+ L + M    + P + T N ++ GL + G +  A+ +
Sbjct: 614 PNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINV 673

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
              M    + PD  T+ T I+G CK   ++ A  +   +        + TYN  I+G C 
Sbjct: 674 FMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCS 733

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             R+  A  +   L   G +P+ VT ++M++ +C +  +D+A  L   +     VP+ VT
Sbjct: 734 SRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD-ILDRAMILTARLLKMAFVPNVVT 792

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMA 566
              LL  F +     + ++  HK++
Sbjct: 793 ANLLLSQFYKQGMPERTLMWGHKLS 817



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 209/465 (44%), Gaps = 39/465 (8%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A  +  ++      P+      L   L R  +     KLF++++      CK    T++
Sbjct: 214 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCK---YTFS 270

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            II G C+ G +   + LL  M   +  PN   YN +I   C      +A   F  M++ 
Sbjct: 271 GIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIER 330

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G  P VVTFN +IN  CK+G + +  +L + + + G +P+ + YN+LM+G+  +  I +A
Sbjct: 331 GCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA 390

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
             L+  M  KG   D  ++NIL++ + K  + ED   L +++    + P    ++  +SG
Sbjct: 391 NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSG 450

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L   G L +A++ +  M    + P    F + I    + G   +A + ++ + +      
Sbjct: 451 LCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 510

Query: 469 IETYNCLINGLCKMGRLKTACK-----------------------------------LFH 493
             T + L+ GL   GRL+ A +                                   L+ 
Sbjct: 511 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 570

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            ++ +G  PDVV  S  I  L K+G +++A ++ L+M  K  +P+   + +L+ GF +  
Sbjct: 571 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG 630

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           K ++ +  L K+   + ++ D+  ++ ++  L K  + R  +N F
Sbjct: 631 KLNEALK-LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVF 674



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 157/343 (45%), Gaps = 18/343 (5%)

Query: 5   SSHRSFSLASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNE 64
           +++    L  KA         FG  P+P T  S      G SI           N    E
Sbjct: 484 AAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSS---LLMGLSI-----------NGRLQE 529

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A      MI+   S    +FT+LL    K        SL+  +   G+FPD+   +  I+
Sbjct: 530 ATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFID 589

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            L K G+   A+ V   +LR    PN   +N LI G C  G++ EA +L K +      P
Sbjct: 590 GLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLP 649

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           ++ T N +I GLC+      A+ +F +M ++ G    PD++TYN++I+G CK   +  A 
Sbjct: 650 DIFTTNMIIGGLCKQGRMRSAINVFMDM-HQTG--LSPDIITYNTLINGYCKAFDMVNAD 706

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            L+ +M     NP++ TYN  I GFC       A  +  E++  G+ P+ VT+N+M+N  
Sbjct: 707 NLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGV 766

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           C D  +D+   L   +++    P+ VT N L+  F   G   R
Sbjct: 767 CSD-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPER 808



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 167/355 (47%), Gaps = 6/355 (1%)

Query: 229 SIIDGLCKDGFVD-----KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           S++D L +  FV+     +A E+L +M++  + P+      L      V D+     LF 
Sbjct: 197 SVLDSLMR-AFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFK 255

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +++  G QP   TF+ +I   C+ G +     LL LM +    P+   YN +++  C+ G
Sbjct: 256 DVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRG 315

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           R S A   F  M+ +GC   V ++N +INA CK+  V +A  L+  +      P+ I YN
Sbjct: 316 RTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYN 375

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL++G  ++  +  A  L ++M+   + PD  TF   + G  K G   +  ++ + I   
Sbjct: 376 TLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVL 435

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                   ++  ++GLC  GRL  A +    +  KG  P ++  +++I    + G  DKA
Sbjct: 436 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKA 495

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +    M      PS  T  +LL G   N +  +   L+ +M  + L V++++ +
Sbjct: 496 FEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFT 550



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 151/322 (46%)

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           +SL+  F   +   +A  +   M + GV+P       +     + G    V +L + +I+
Sbjct: 200 DSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIR 259

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RG  P   T++ ++ GFC  G I     L   M    C  + ++YNI+INA C   +  D
Sbjct: 260 RGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSD 319

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A+  +  M+     P+V+T+NT+++   + GN+ +A KL D ++     P++  + T ++
Sbjct: 320 ALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMN 379

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G  K   + +A  +++ +R         T+N L++G  K GR +   +L   +   G +P
Sbjct: 380 GYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLP 439

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D       +  LC  G++D+A + L+DM  K   PS + F +++  + Q   + K     
Sbjct: 440 DRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAY 499

Query: 563 HKMAAEKLVVSDLSLSSKVVDL 584
             M    L  S  + SS ++ L
Sbjct: 500 KLMVHFGLTPSPSTCSSLLMGL 521


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 155/580 (26%), Positives = 282/580 (48%), Gaps = 77/580 (13%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           ++  L K K+ D   S+ +++  +G+ PDLF  +L+I+ LCK      A  VL +++ + 
Sbjct: 251 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 310

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLN-------VFACD---------------- 183
             PN++T+N LI+G    G   E+ R+FK+++       V  C+                
Sbjct: 311 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 370

Query: 184 ------------PNVVTFNTLINGLCRTRNTLV--------------------------- 204
                       P++++++T+++G     ++ +                           
Sbjct: 371 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 430

Query: 205 ----------ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
                     A+ +FE+M N+ G I  PD VT+ ++I  LC+ G +D A      M D  
Sbjct: 431 AYARCGMMDKAMLIFEDMQNK-GMI--PDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 487

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT-FNAMINYNCKDGKMDKV 313
           + P+   Y  LI G C   +  +AK L  EMM+  + P  V  F+++IN  CK+G++ + 
Sbjct: 488 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 547

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             ++++M+Q G  P+ VT+NSLM+G+CLVG +  A  L  +M S G   + Y Y  L++ 
Sbjct: 548 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 607

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK+ +++DA+ ++R+ML + ++P+ + Y+ +L GLFQ      A K+  +M  +     
Sbjct: 608 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 667

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   + GLC+N    EA  + + +     +  I T+N +I+ + K+GR + A +LF 
Sbjct: 668 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 727

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +   G +P++ T S MI  L KE   ++A++L + +E             ++R  +   
Sbjct: 728 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 787

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           + +K    L  +    L + + S  S +  L S++ KYRE
Sbjct: 788 EVAKASNYLSIIGENNLTL-EASTISLLASLFSREGKYRE 826



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 242/516 (46%), Gaps = 46/516 (8%)

Query: 100 VVSLFKRLN----SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
            + LFKR++         P +   N+LI+C  ++        ++GR+L++   P+  +++
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI G   +G + +A  LF ++      P ++  N++I  LC+ +    A  + ++MV+ 
Sbjct: 216 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
             A   PD+ TY+ IIDGLCK   +DKA+ +L QM +    PN ITYNSLI G+     W
Sbjct: 275 GIA---PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMW 331

Query: 276 -----------------------------------KEAKCLFIEMMDNGVQPDVVTFNAM 300
                                               EAKC+F  M+  G +PD+++++ M
Sbjct: 332 NESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 391

Query: 301 IN--YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++      D  +  V+ +  LM+ +G+ P+   +N L++ +   G + +A  +F  M +K
Sbjct: 392 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 451

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   D  ++  +I++ C+  +++DA+  +  M+   + PS   Y  L+ G    G L  A
Sbjct: 452 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 511

Query: 419 LKLIDKMQLNDVVPDSFT-FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
            +LI +M   D+ P     F++ I+ LCK G V E   +   +        + T+N L+ 
Sbjct: 512 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 571

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G C +G ++ A  L   +   G  P+     T++   CK G++D A  +  DM  K   P
Sbjct: 572 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 631

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           + V +  +L G  Q  + +    + H+M      VS
Sbjct: 632 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 667



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 264/550 (48%), Gaps = 42/550 (7%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+    K+ + D    LF  +   G+ P + + N +I  LCKM     A  ++ +++ S 
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+  T++ +I+GLC    + +A R+ +++      PN +T+N+LI+G   +     ++
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           ++F++M +  G I  P V   NS I  L K G  ++AK +   M  +   P++I+Y++++
Sbjct: 336 RVFKQM-SSCGVI--PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 392

Query: 267 CGFCCVDD--WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
            G+    D    +   +F  M+  G+ P+   FN +IN   + G MDK   + E M  +G
Sbjct: 393 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 452

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG---------------CRH------- 362
           + PDTVT+ +++   C +GR+  A   F  MV  G               C H       
Sbjct: 453 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 512

Query: 363 --------------DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
                          V  ++ +IN  CK+ +V +   +   M+    RP+V+T+N+L+ G
Sbjct: 513 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 572

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
              VGN+ +A  L+D M    + P+ + + T +DG CKNG + +A+ VF+ + +   +  
Sbjct: 573 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 632

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
              Y+ +++GL +  R   A K+FH +   G    + T   ++  LC+    D+AN LL 
Sbjct: 633 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLE 692

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            + A N     +TF  ++    +  ++ +   L   ++   LV +  + S  + +L+ K+
Sbjct: 693 KLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI-KE 751

Query: 589 KKYRECLNQF 598
           + Y E  N F
Sbjct: 752 ESYEEADNLF 761



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 228/468 (48%), Gaps = 4/468 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLT--MLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
           +NEA   FD M+   P P + S++ +L     A +     V ++F  + + G+ P+  V 
Sbjct: 366 TNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVF 425

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N+LIN   + G+   A ++   +      P+TVTF  +I+ LC  GR+ +A   F  +  
Sbjct: 426 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVD 485

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+   +  LI G C     + A +L  EM+N+   I  P V  ++SII+ LCK+G 
Sbjct: 486 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK--DIPPPGVKYFSSIINNLCKEGR 543

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           V + K+++  M      PNV+T+NSL+ G+C V + +EA  L   M   G++P+   +  
Sbjct: 544 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 603

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +++  CK+G++D    +   M+ +GV P +V Y+ ++ G     R + A+++F  M+  G
Sbjct: 604 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 663

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
               +++Y +++   C++   ++A  L  ++ +  ++  +IT+N ++S +F+VG   +A 
Sbjct: 664 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 723

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +L D +    +VP+  T++  I  L K     EA  +F ++            N ++  L
Sbjct: 724 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRML 783

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
                +  A      +       +  T S +     +EG+  +   LL
Sbjct: 784 LNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 831



 Score = 45.1 bits (105), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 453 AVQVFQAIRNCKCELR----IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
           A+++F+ +    C       I TYN LI+   ++ R      +  RL   G  PD  + S
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +I+   K+G++DKA+ L L+M  +  +P  +   ++++   +  +  K   ++ KM  +
Sbjct: 216 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKM-VD 273

Query: 569 KLVVSDLSLSSKVVDLLSKDK 589
             +  DL   S ++D L K K
Sbjct: 274 SGIAPDLFTYSLIIDGLCKSK 294


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 147/489 (30%), Positives = 250/489 (51%), Gaps = 5/489 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+  FD M K  PSP   +F++L+    KN + +  +  +K++   GL P +F ++ +I 
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
              K      A  +      +    N    N +++ LC +G+  EA  L  K+      P
Sbjct: 418 GWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           NVV++N ++ G CR +N  +A  +F  ++ E G   KP+  TY+ +IDG  ++     A 
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNIL-EKG--LKPNNYTYSILIDGCFRNHDEQNAL 533

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINY 303
           E++  M   NI  N + Y ++I G C V    +A+ L   M++   +    +++N++I+ 
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDG 593

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K+G+MD      E M   G++P+ +TY SLM+G C   R+ +A E+   M +KG + D
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +Y  LI+  CK   +E A  L+ E+L E + PS   YN+L+SG   +GN+  AL L  
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           KM  + +  D  T+ T IDGL K+G ++ A +++  ++          Y  ++NGL K G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +     K+F  ++     P+V+  + +I    +EG +D+A  L  +M  K  +P   TF 
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 833

Query: 544 TLLRGFVQN 552
            L+ G V N
Sbjct: 834 ILVSGQVGN 842



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 249/492 (50%), Gaps = 13/492 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++T ++    K    D  + L   + S+G+  ++     LI   CK      A V+
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++ +   +PN+VTF+ LI      G + +A   +KK+ V    P+V   +T+I G  +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +    ALKLF+E   E G     +V   N+I+  LCK G  D+A ELL +M+ R I PN
Sbjct: 422 GQKHEEALKLFDESF-ETGL---ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V++YN+++ G C   +   A+ +F  +++ G++P+  T++ +I+   ++        ++ 
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-----GCRHDVYSYNILINA 373
            M    +  + V Y ++++G C VG+ S+AREL  +M+ +      C     SYN +I+ 
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC----MSYNSIIDG 593

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             K+ +++ AV  Y EM    I P+VITY +L++GL +   +  AL++ D+M+   V  D
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
              +   IDG CK   +  A  +F  +           YN LI+G   +G +  A  L+ 
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           ++   G   D+ T +T+I  L K+G +  A++L  +M+A   VP E+ +  ++ G  +  
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773

Query: 554 KKSKVVVLLHKM 565
           +  KVV +  +M
Sbjct: 774 QFVKVVKMFEEM 785



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/523 (23%), Positives = 238/523 (45%), Gaps = 37/523 (7%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +F  LL   +K++Q D  V +  ++    + P    +N  ++ L +    + A  +  R+
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +      + VT   L+     E +  EA  +  +      +P+ + ++  +   C+T + 
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            +A  L  EM  +   +C P   TY S+I    K G +D A  L  +M    I+ NV+  
Sbjct: 285 AMANSLLREMKEK--KLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAA 342

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            SLI G C  +D   A  LF +M   G  P+ VTF+ +I +  K+G+M+K     + M  
Sbjct: 343 TSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV 402

Query: 323 RGVNPDTVTYNSLMDGF----------------------------------CLVGRISRA 348
            G+ P     ++++ G+                                  C  G+   A
Sbjct: 403 LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEA 462

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            EL   M S+G   +V SYN ++  +C+ + ++ A  ++  +L + ++P+  TY+ L+ G
Sbjct: 463 TELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCEL 467
            F+  +  +AL++++ M  +++  +   + T I+GLCK G   +A ++    I   +  +
Sbjct: 523 CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCV 582

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
              +YN +I+G  K G + +A   +  +   G  P+V+T +++++ LCK  +MD+A ++ 
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            +M+ K        +  L+ GF + +       L  ++  E L
Sbjct: 643 DEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 109/286 (38%), Gaps = 71/286 (24%)

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L  S  S G   +  ++N L+NA  KD++ + AV +  +ML   + P     N  LS L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208

Query: 410 FQVGNLGDALKLIDKM------------QL-----------------------NDVVPDS 434
            Q  +L +A +L  +M            QL                           PDS
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCK-CELRIETYNCLI----------------- 476
             ++  +   CK   +  A  + + ++  K C    ETY  +I                 
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328

Query: 477 ------------------NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
                              G CK   L +A  LF +++ +GP P+ VT S +I W  K G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +M+KA +    ME     PS     T+++G+++  K  + + L  +
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 434


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 249/490 (50%), Gaps = 6/490 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+  +  M+     P + +++ L+  L K +  + V+ L K +   GL P+++   + 
Sbjct: 209 GEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTIC 268

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  L + G    A+ +  R+      P+ VT+  LI+ LC  G++  A  LF K+     
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK-PDVVTYNSIIDGLCKDGFVD 241
            P+ V + TL++      N    L  F+E  ++  A    PDVVT+  ++D LCK    D
Sbjct: 329 KPDQVIYITLLDKF----NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFD 384

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A      M+ + I PN+ TYN+LICG       ++A  L   M   GVQP   T+N  I
Sbjct: 385 EAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFI 444

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +Y  K G+  K     E M  +G+ P+ V  N+ +     +GR+  A+ +F  +   G  
Sbjct: 445 DYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLA 504

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YN+++    K  +V++AV L  EM+     P VI  N+L+  L++ G + +A ++
Sbjct: 505 PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQM 564

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            D+M+   + P   T+ T + GL K G V +A+++F+++   KC     ++N L++  CK
Sbjct: 565 FDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCK 624

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              ++ A K+F ++      PDV+T +T+I+ L KE +++ A      ++ K+  P  VT
Sbjct: 625 NDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVT 683

Query: 542 FCTLLRGFVQ 551
            CTLL G V+
Sbjct: 684 ICTLLPGLVK 693



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 279/558 (50%), Gaps = 41/558 (7%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            EA   F+ + +   +P   ++ +++   +K  Q D  V+L   +  NG  PD+ V+N LI
Sbjct: 490  EAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI 549

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
            + L K G    A+ +  R+     +P  VT+N L++GL  EGR+ +A  LF+ +    C 
Sbjct: 550  DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCS 609

Query: 184  PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            PN ++FNTL++  C+     +ALK+F +M       CKPDV+TYN++I GL K+  V+ A
Sbjct: 610  PNTISFNTLLDCFCKNDEVELALKMFSKMTV---MDCKPDVLTYNTVIYGLIKENKVNHA 666

Query: 244  KELLLQMKDRNINPNVIT------------------------------------YNSLIC 267
                 Q+K ++++P+ +T                                    +  L+ 
Sbjct: 667  FWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMG 725

Query: 268  GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR-GVN 326
            G     +  +A     E++ NG+  +      ++   CK  +     ++ +   ++ G++
Sbjct: 726  GTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGIS 785

Query: 327  PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            P   +YN L+     V    +A +LF  M + GC  D +++N+L+  + K  K+ +   L
Sbjct: 786  PTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFEL 845

Query: 387  YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            Y+EM+S R +P  ITYN ++S L +  NL  AL     +  +D  P   T+   IDGL K
Sbjct: 846  YKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAK 905

Query: 447  NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
             G + EA+++F+ + +  C+     +N LING  K+G  +TAC+LF R+ ++G  PD+ +
Sbjct: 906  VGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS 965

Query: 507  CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
             + ++  LC  G++D+A     ++++    P  + +  ++ G  ++ +  + + L ++M 
Sbjct: 966  YTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025

Query: 567  AEKLVVSDLSLSSKVVDL 584
               +V    + +S +++L
Sbjct: 1026 NRGIVPDLYTYNSLMLNL 1043



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 253/521 (48%), Gaps = 3/521 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F+ M K      + ++  +   L+       + ++  ++   G   + +  N LI+ L +
Sbjct: 145 FEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQ 204

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A  V  R++     P+  T++ L+  L  +        L K++      PNV T
Sbjct: 205 SGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYT 264

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           F   I  L R      A ++F  M +E    C PD+VTY  +ID LC  G ++ AKEL +
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEG---CGPDLVTYTVLIDALCNAGQLENAKELFV 321

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK     P+ + Y +L+  F    D    K  + +M  +G  PDVVTF  +++  CK  
Sbjct: 322 KMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKAR 381

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
             D+     ++M ++G+ P+  TYN+L+ G    GRI  A +L  +M S G +   Y+YN
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYN 441

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           I I+   K  +   AV  + +M ++ I P+++  N  L  L ++G L +A  + + ++ N
Sbjct: 442 IFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            + PDS T+   +    K G V EAV +   +    CE  +   N LI+ L K GR+  A
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            ++F R++     P VVT +T++  L KEG++ KA +L   M  K C P+ ++F TLL  
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDC 621

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           F +N++    + +  KM         L+ ++ +  L+ ++K
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 239/483 (49%), Gaps = 3/483 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+  L+ +L ++      + +++R+ S GL P L   + L+  L K   +    V+L  +
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 PN  TF   I  L   G+I EA  +F++++   C P++VT+  LI+ LC     
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A +LF +M        KPD V Y +++D     G +D  KE   QM+     P+V+T+
Sbjct: 314 ENAKELFVKMKANGH---KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             L+   C   D+ EA   F  M   G+ P++ T+N +I    + G+++   +LL  M  
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES 430

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            GV P   TYN  +D F   G   +A E F  M +KG   ++ + N  + +  +  ++ +
Sbjct: 431 VGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  ++  +    + P  +TYN ++    +VG + +A+ L+ +M  N   PD     + ID
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
            L K G V EA Q+F  +++ K    + TYN L++GL K GR++ A +LF  +  K   P
Sbjct: 551 SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSP 610

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           + ++ +T++   CK  +++ A  +   M   +C P  +T+ T++ G ++ NK +      
Sbjct: 611 NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF 670

Query: 563 HKM 565
           H++
Sbjct: 671 HQL 673



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 158/621 (25%), Positives = 279/621 (44%), Gaps = 94/621 (15%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN----- 110
           ++G I  +EA   F  M      P + ++T+L+  L    Q +    LF ++ +N     
Sbjct: 274 RAGKI--DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPD 331

Query: 111 ------------------------------GLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
                                         G  PD+    +L++ LCK      AF    
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFD 391

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            + +    PN  T+N LI GL   GRI +A +L   +      P   T+N  I+   ++ 
Sbjct: 392 VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSG 451

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            T  A++ FE+M  + G +  P++V  N+ +  L + G + +AK +   +++  + P+ +
Sbjct: 452 ETGKAVETFEKMKAK-GIV--PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TYN ++  +  V    EA  L  EM+ NG +PDV+  N++I+   K G++D+  ++ + M
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
               ++P  VTYN+L+ G    GR+ +A ELF SM+ K C  +  S+N L++  CK+ +V
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEV 628

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           E A+ ++ +M     +P V+TYNT++ GL +   +  A     +++   + PD  T  T 
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTL 687

Query: 441 IDGLCKNGFVLEAVQV---------FQAIRNCKCELR-------------IETYNCLING 478
           + GL K G + +A+ +         F+  R+   +L              I     ++NG
Sbjct: 688 LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747

Query: 479 --------------LCKMGRLKTACKLFHRLQHK-GPIPDVVTCSTMIHWLCKEGQMDKA 523
                         LCK  R   A ++F +   K G  P + + + +I  L +    +KA
Sbjct: 748 ICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKA 807

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK---------LVVSD 574
            DL  DM+   C P   TF  LL    ++ K +++  L  +M + +         +V+S 
Sbjct: 808 WDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISS 867

Query: 575 LSLSSKV-------VDLLSKD 588
           L+ S+ +        DL+S D
Sbjct: 868 LAKSNNLDKALDFFYDLVSSD 888



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 256/541 (47%), Gaps = 37/541 (6%)

Query: 43   DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
            D   +   ++  +K+G +  +EA   FD M  MK SP + ++  LL+ L K  +    + 
Sbjct: 541  DVIVVNSLIDSLYKAGRV--DEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIE 598

Query: 103  LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            LF+ +      P+    N L++C CK      A  +  ++      P+ +T+N +I GL 
Sbjct: 599  LFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658

Query: 163  AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF------ 216
             E ++  A   F +L   +  P+ VT  TL+ GL +      A+ +  + + +       
Sbjct: 659  KENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNR 717

Query: 217  --------GAICKPD-----VVTYNSIIDGLCK-DGFV---------DKAKELLLQMKDR 253
                    G + + +     +     +++G+C+ D F+          K +    Q+ D+
Sbjct: 718  SFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDK 777

Query: 254  -----NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
                  I+P + +YN LI     V   ++A  LF +M + G  PD  TFN ++  + K G
Sbjct: 778  FTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSG 837

Query: 309  KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            K+ ++  L + MI R   PD +TYN ++        + +A + F  +VS   R    +Y 
Sbjct: 838  KITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYG 897

Query: 369  ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
             LI+   K  ++E+A+ L+ EM     +P+   +N L++G  ++G+   A +L  +M   
Sbjct: 898  PLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE 957

Query: 429  DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
             + PD  ++   +D LC  G V EA+  F  +++   +     YN +INGL K  R++ A
Sbjct: 958  GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017

Query: 489  CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
              L++ ++++G +PD+ T ++++  L   G +++A  +  +++     P   T+  L+RG
Sbjct: 1018 LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077

Query: 549  F 549
            +
Sbjct: 1078 Y 1078



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/545 (24%), Positives = 251/545 (46%), Gaps = 15/545 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M K    P + ++  L+  L +  + +  + L   + S G+ P  +  N+ 
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIF 443

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K G T  A     ++      PN V  N  +  L   GR+ EA  +F  L     
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ VT+N ++    +      A+ L  EM+      C+PDV+  NS+ID L K G VD+
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG---CEPDVIVVNSLIDSLYKAGRVDE 560

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++  +MKD  ++P V+TYN+L+ G       ++A  LF  M++    P+ ++FN +++
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLD 620

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+ +++   ++   M      PD +TYN+++ G     +++ A   F   + K    
Sbjct: 621 CFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF-WFFHQLKKSMHP 679

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKL 421
           D  +   L+    K  ++ DA+ + R+ + + R R +   +  L+ G      +  A+  
Sbjct: 680 DHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIF 739

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNCLINGLC 480
            +++ LN +  +       +  LCK+   L A Q+F    +       + +YNCLI  L 
Sbjct: 740 AEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELL 799

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           ++   + A  LF  +++ G  PD  T + ++    K G++ +  +L  +M ++ C P  +
Sbjct: 800 EVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAI 859

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK----VVDLLSKDKKYRECLN 596
           T+  ++    ++N   K +   +      LV SD   + +    ++D L+K  +  E + 
Sbjct: 860 TYNIVISSLAKSNNLDKALDFFY-----DLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMR 914

Query: 597 QFRHL 601
            F  +
Sbjct: 915 LFEEM 919



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 182/383 (47%), Gaps = 4/383 (1%)

Query: 96   QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC-FTPNTVTF 154
            + D  +   + L  NG+  +   L  L+  LCK      A+ +  +  +    +P   ++
Sbjct: 732  EMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASY 791

Query: 155  NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
            N LI  L       +A  LFK +    C P+  TFN L+    ++       +L++EM++
Sbjct: 792  NCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS 851

Query: 215  EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                 CKPD +TYN +I  L K   +DKA +    +   +  P   TY  LI G   V  
Sbjct: 852  RR---CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 275  WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
             +EA  LF EM D G +P+   FN +IN   K G  +   +L + M+  G+ PD  +Y  
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 335  LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
            L+D  CL GR+  A   F  + S G   D  +YN +IN   K Q++E+A+ LY EM +  
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 395  IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
            I P + TYN+L+  L   G +  A ++ +++QL  + PD FT+   I G   +     A 
Sbjct: 1029 IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAY 1088

Query: 455  QVFQAIRNCKCELRIETYNCLIN 477
             V++ +    C   I TY  L N
Sbjct: 1089 TVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 212/457 (46%), Gaps = 20/457 (4%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK------RLNSNGLFPDL 116
            N A +FF   +K    P   +   LL  L K  Q    +S+ +      R   N  F + 
Sbjct: 664  NHAFWFFH-QLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWED 722

Query: 117  FVLNLLINCLCKMGITSGAFVVLGRILR--SCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
             +   L+       I     +VL  I R  S   P       L+  LC   R + A ++F
Sbjct: 723  LMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP-------LVRVLCKHKRELYAYQIF 775

Query: 175  KKLNV-FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             K        P + ++N LI  L     T  A  LF++M N     C PD  T+N ++  
Sbjct: 776  DKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN---VGCAPDAFTFNMLLAV 832

Query: 234  LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
              K G + +  EL  +M  R   P+ ITYN +I      ++  +A   F +++ +  +P 
Sbjct: 833  HGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPT 892

Query: 294  VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
              T+  +I+   K G++++  RL E M   G  P+   +N L++G+  +G    A +LF 
Sbjct: 893  PRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFK 952

Query: 354  SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
             MV++G R D+ SY IL++  C   +V++A+  + E+ S  + P  I YN +++GL +  
Sbjct: 953  RMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQ 1012

Query: 414  NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
             + +AL L ++M+   +VPD +T+ + +  L   G V +A ++++ ++    E  + TYN
Sbjct: 1013 RMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYN 1072

Query: 474  CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             LI G       + A  ++  +   G  P++ T + +
Sbjct: 1073 ALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 125/251 (49%)

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T N M+ +     K++ +  + E M ++ +  D  TY ++     + G + +   +   M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              G   + YSYN LI+   +     +A+ +YR M+SE ++PS+ TY+ L+  L +  + 
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
              + L+ +M+   + P+ +TF   I  L + G + EA ++F+ + +  C   + TY  L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+ LC  G+L+ A +LF +++  G  PD V   T++      G +D   +    MEA   
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 536 VPSEVTFCTLL 546
           +P  VTF  L+
Sbjct: 364 MPDVVTFTILV 374



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 136/295 (46%)

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           D  ++   +F  M    ++ D+ T+  +       G + ++  +L  M + G   +  +Y
Sbjct: 136 DKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSY 195

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N L+      G    A E++  MVS+G +  + +Y+ L+ A  K +  E  + L +EM  
Sbjct: 196 NGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMED 255

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             +RP+V T+   +  L + G + +A ++  +M      PD  T+   ID LC  G +  
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A ++F  ++    +     Y  L++     G L T  + + +++  G +PDVVT + ++ 
Sbjct: 316 AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            LCK    D+A      M  +  +P+  T+ TL+ G ++  +    + LL  M +
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES 430



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 113/255 (44%), Gaps = 36/255 (14%)

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           KVED   ++  M  + IR  + TY T+   L   G L     +++KM+    V +++++ 
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK----------------- 481
             I  L ++GF  EA++V++ + +   +  ++TY+ L+  L K                 
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 482 ------------------MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                              G++  A ++F R+  +G  PD+VT + +I  LC  GQ++ A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            +L + M+A    P +V + TLL  F              +M A+   + D+   + +VD
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG-YMPDVVTFTILVD 375

Query: 584 LLSKDKKYRECLNQF 598
           +L K + + E    F
Sbjct: 376 VLCKARDFDEAFATF 390



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 65/132 (49%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +EA+Y+F+ +      P   ++  ++  L K+++ +  ++L+  + + G+ PDL+  N L
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            +  L   G+   A  +   +  +   P+  T+N LI G         A  ++K + V  C
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGC 1099

Query: 183  DPNVVTFNTLIN 194
            +PN+ T+  L N
Sbjct: 1100 NPNIGTYAQLPN 1111


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 136/407 (33%), Positives = 228/407 (56%), Gaps = 13/407 (3%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A  LF +L      P  + FN ++  L ++++    L L ++M  EF  I KP++V  N
Sbjct: 45  DAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKM--EFRGI-KPNLVNCN 101

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC----------CVDDWKEA 278
            +I+  C+ G +  A  +L ++      PN IT N+LI G C           V   K+A
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDA 161

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
             LF +M+   + PDV TF  +++  CK+G++ +   +L +M+ +G+ P  VTYNSLMDG
Sbjct: 162 VDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDG 221

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           + LV ++++A+ +F +M   G   D+ SY+ILIN  CK + +++A+ L +EM  ++I P+
Sbjct: 222 YFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPN 281

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           V+TY++L+ GL + G +  ALKL+D+M      P+  T+++ +D LCKN  V  A+ +  
Sbjct: 282 VVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLT 341

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            ++N   +  + TY  LI GLC+ G+L+ A K+F  L  KG   +V T + MI   C +G
Sbjct: 342 QMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKG 401

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             D+A  LL  ME   C+P+  T+  ++    + ++      LL +M
Sbjct: 402 LFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/394 (33%), Positives = 217/394 (55%), Gaps = 13/394 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ +++  P+P    F  +L  L K+K Y TV+ L +++   G+ P+L   N+L
Sbjct: 44  DDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 103

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM----------EAAR 172
           IN  C++G    AF VL +IL+  + PNT+T N LI GLC  G+I           +A  
Sbjct: 104 INSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVD 163

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           LF K+ +   +P+V TF  L++G C+      A  +   M+ +     KP VVTYNS++D
Sbjct: 164 LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQG---IKPGVVTYNSLMD 220

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G      V+KAK +   M    ++P++ +Y+ LI GFC +    EA  L  EM    + P
Sbjct: 221 GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIP 280

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +VVT++++I+  CK GK+    +L++ M  RG  P+ VTY+S++D  C   ++  A  L 
Sbjct: 281 NVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALL 340

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M ++G + ++Y+Y ILI   C+  K+EDA  ++ ++L +    +V TY  ++ G    
Sbjct: 341 TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDK 400

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           G   +AL L+ KM+ N  +P++ T+   I  L K
Sbjct: 401 GLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFK 434



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 209/410 (50%), Gaps = 13/410 (3%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  +  R+L+   TP  + FN ++  L           L +K+      PN+V  N LIN
Sbjct: 46  AVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 105

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD-- 252
             C+  +   A  +  +++ + G   KP+ +T N++I GLC +G +     ++ ++KD  
Sbjct: 106 SFCQLGHIPSAFSVLTKIL-KMGY--KPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 253 --------RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
                    NINP+V T+  L+ GFC     KEAK +   MM  G++P VVT+N++++  
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
               +++K   +   M Q GV+PD  +Y+ L++GFC +  +  A EL   M  K    +V
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y+ LI+  CK  K+  A+ L  EM      P+++TY+++L  L +   + +A+ L+ +
Sbjct: 283 VTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQ 342

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+   + P+ +T+   I GLC++G + +A +VF+ +      L + TY  +I G C  G 
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
              A  L  +++  G IP+  T   +I  L K+ + + A  LL +M   N
Sbjct: 403 FDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETN 452



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 171/366 (46%), Gaps = 45/366 (12%)

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           L + GFV  +K+        N + N I Y S    F   +D  +A  LF  ++     P 
Sbjct: 2   LLRYGFVPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPP 61

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF-------------- 339
            + FN ++    K      V  L + M  RG+ P+ V  N L++ F              
Sbjct: 62  NIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLT 121

Query: 340 -------------------------------CLVGRISRARELFVSMVSKGCRHDVYSYN 368
                                          C+VG++  A +LF  M+ +    DVY++ 
Sbjct: 122 KILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFT 181

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           IL++  CK+ +V++A  +   M+ + I+P V+TYN+L+ G F V  +  A  + + M   
Sbjct: 182 ILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQL 241

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V PD  +++  I+G CK   + EA+++ + + + +    + TY+ LI+GLCK G++  A
Sbjct: 242 GVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYA 301

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            KL   +  +G  P++VT S+++  LCK  Q+D A  LL  M+ +   P+  T+  L++G
Sbjct: 302 LKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKG 361

Query: 549 FVQNNK 554
             Q+ K
Sbjct: 362 LCQSGK 367



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 2/158 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG I+   A+   D M      P + +++ +L  L KN Q D  ++L  ++ + G+ P+
Sbjct: 294 KSGKISY--ALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPN 351

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++   +LI  LC+ G    A  V   +L      N  T+  +I G C +G   EA  L  
Sbjct: 352 MYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLS 411

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
           K+    C PN  T+  +I  L +     +A KL  EM+
Sbjct: 412 KMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMI 449


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 261/538 (48%), Gaps = 5/538 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEAV  F+ M + K  P   ++  ++       +++   SL +R    G  P +   N +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++CL + G    A      + +    PN  T+N +I+ LC  G++  A  +   +     
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV+T N +++ LC+ +    A  +FE + ++    C+PD VTY S+I+GL + G VD+
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK---TCRPDAVTYCSLIEGLGRHGRVDE 497

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  QM D N  PN + Y SLI  F      ++   ++ EM+  G  PD++  N  ++
Sbjct: 498 AYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMD 557

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G+++K   L + +   G  PD  +Y  L+ G    G    A ELF +M  +GC  
Sbjct: 558 CVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVL 617

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +YN +I+  CK  KV  A  L  EM ++   P+V+TY +++ GL ++  L +A  L 
Sbjct: 618 DTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLF 677

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++ +   +  +   +++ IDG  K G + EA  + + +        + T+NCL++ L K 
Sbjct: 678 EEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 737

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             +  A   F  ++     P+ +T S +IH LCK  + +KA     +M+ +   P+  T+
Sbjct: 738 EEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTY 797

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRH 600
            T++ G  +     +   L  K   EK  V+D ++ + +++ LS   +  +    F  
Sbjct: 798 TTMISGLAKAGNIVEADTLFEKF-KEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 231/489 (47%), Gaps = 33/489 (6%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+  +L+ L +  Q D  +  F+ +  + + P+L   N++I+ LCK G    A VV
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVV 431

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +  +   PN +T N +++ LC   R+ +A  +F+ L+   C P+ VT+ +LI GL R
Sbjct: 432 RDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491

Query: 199 TRNTLVALKLFEEMV-------------------------------NEFGAI-CKPDVVT 226
                 A KL+E+M+                               NE   + C PD++ 
Sbjct: 492 HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLL 551

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
            N+ +D + K G ++K + L  ++K+    P+  +Y  LI G        EA  LF  M 
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           + G   D   +N +I+  CK GK++K  +LLE M  +G  P  VTY S++DG   + R+ 
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  LF    SKG   +V  Y+ LI+   K  ++++A  +  E++ + + P+V T+N LL
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
             L +   + +AL     M+     P+  T++  I GLCK     +A   +Q ++    +
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + TY  +I+GL K G +  A  LF + + KG + D    + +I  L    +   A  L
Sbjct: 792 PNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRL 851

Query: 527 LLDMEAKNC 535
             +   K C
Sbjct: 852 FEEARLKGC 860



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 269/570 (47%), Gaps = 34/570 (5%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA  F   M K+K  P  +++T L+  L+ ++  D +++LF+++   G   ++ +   LI
Sbjct: 183 EAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLI 242

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
               + G    A  +L  +  +   P+ V +N  I+     G++  A + F ++      
Sbjct: 243 RVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLV 302

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEE---------------MVNEFGAI--------- 219
            + VT+ ++I  LC+      A++LFE                M+  +G           
Sbjct: 303 LDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSL 362

Query: 220 --------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
                   C P VV+YN I+  L + G VD+A +   +MK   I PN+ TYN +I   C 
Sbjct: 363 LERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCK 421

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
               + A  +   M D G+ P+V+T N M++  CK  ++D    + E +  +   PD VT
Sbjct: 422 AGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVT 481

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y SL++G    GR+  A +L+  M+      +   Y  LI    K  + ED   +Y EML
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
                P ++  NT +  +F+ G +     L  +++    +PD+ ++   I GL K GF  
Sbjct: 542 RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAH 601

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           EA ++F  ++   C L    YN +I+G CK G++  A +L   ++ KG  P VVT  ++I
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             L K  ++D+A  L  + ++K    + V + +L+ GF +  +  +  +++ ++  +K +
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL-MQKGL 720

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             ++   + ++D L K ++  E L  F+ +
Sbjct: 721 TPNVYTWNCLLDALVKAEEISEALVCFQSM 750



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 238/496 (47%), Gaps = 39/496 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F+ M K    P ++++ I++ ML K  + +T + +   +   GLFP++  +N++
Sbjct: 392 DEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIM 450

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           ++ LCK      A  +   +      P+ VT+  LI GL   GR+ EA +L++++     
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 178 ------------NVF------------------ACDPNVVTFNTLINGLCRTRNTLVALK 207
                       N F                   C P+++  NT ++ + +         
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           LF+E+ N  G I  PD  +Y  +I GL K GF  +A EL   MK++    +   YN++I 
Sbjct: 571 LFQEIKN-LGFI--PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVID 627

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GFC      +A  L  EM   G +P VVT+ ++I+   K  ++D+   L E    +G+  
Sbjct: 628 GFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIEL 687

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + V Y+SL+DGF  VGRI  A  +   ++ KG   +VY++N L++A  K +++ +A+  +
Sbjct: 688 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCF 747

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           + M   +  P+ ITY+ L+ GL ++     A     +MQ     P+ FT+ T I GL K 
Sbjct: 748 QSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKA 807

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G ++EA  +F+  +          YN +I GL    R   A +LF   + KG      TC
Sbjct: 808 GNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTC 867

Query: 508 STMIHWLCKEGQMDKA 523
             ++  L K   +++A
Sbjct: 868 VVLLDSLHKAECIEQA 883



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 177/379 (46%), Gaps = 6/379 (1%)

Query: 188 TFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
            +N+L+  + RTR      ++ EEM +  FG    P   T   I+    K   + +A   
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFG----PSNNTCIEIVLSFIKSRKLREAFTF 187

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           +  M+     P    Y +LI       D      LF +M + G   +V  F  +I    +
Sbjct: 188 IQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAR 247

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G++D    LL+ M    + PD V YN  +D F   G++  A + F  M + G   D  +
Sbjct: 248 EGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVT 307

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y  +I   CK  ++ +AV L+  M   +  P    YNT++ G    G   DA  L+++ +
Sbjct: 308 YTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQR 367

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
               +P   ++   +  L + G V EA++ F+ ++       + TYN +I+ LCK G+L+
Sbjct: 368 RKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLE 426

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           TA  +   ++  G  P+V+T + M+  LCK  ++D A  +   ++ K C P  VT+C+L+
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486

Query: 547 RGFVQNNKKSKVVVLLHKM 565
            G  ++ +  +   L  +M
Sbjct: 487 EGLGRHGRVDEAYKLYEQM 505



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 154/329 (46%), Gaps = 5/329 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G I    A+  F  +  +   P   S+TIL+  L K         LF  +   G   D
Sbjct: 561 KAGEIEKGRAL--FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLD 618

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N +I+  CK G  + A+ +L  +      P  VT+  +I+GL    R+ EA  LF+
Sbjct: 619 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFE 678

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +      + NVV +++LI+G  +      A  + EE++ +      P+V T+N ++D L 
Sbjct: 679 EAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG---LTPNVYTWNCLLDALV 735

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   + +A      MKD    PN ITY+ LI G C +  + +A   + EM   G +P+V 
Sbjct: 736 KAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVF 795

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  MI+   K G + + + L E   ++G   D+  YN++++G     R S A  LF   
Sbjct: 796 TYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEA 855

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAV 384
             KGC     +  +L+++  K + +E A 
Sbjct: 856 RLKGCSIYTKTCVVLLDSLHKAECIEQAA 884



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 1/226 (0%)

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K +K+ +A    + M   + RP+   Y  L+  L    +    L L  +MQ      +  
Sbjct: 177 KSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVH 236

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
            F T I    + G V  A+ +   +++   E  +  YN  I+   K G++  A K FH +
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEM 296

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +  G + D VT ++MI  LCK  ++++A +L   M+    VP    + T++ G+    K 
Sbjct: 297 KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKF 356

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                LL +   +  + S +S +  ++  L +  +  E L +F  +
Sbjct: 357 EDAYSLLERQRRKGCIPSVVSYNC-ILSCLGRKGQVDEALKKFEEM 401


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 268/534 (50%), Gaps = 4/534 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+  +  MI     P M +++ L+  L +      +++L + + S GL P+++   + 
Sbjct: 217 NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTIC 276

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  L +      A+ +   +      P+ +T+  LI+ LCA G++ +A  L+ K+   + 
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH 336

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ VT+ TL++   +  +     + + EM  +  A   PDVVTY  +I+ LCK G VD+
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA---PDVVTYTILIEALCKSGDVDR 393

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++L  M  + I PN+ TYN++ICG        EA  L   M   GV+P   ++   I+
Sbjct: 394 AFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFID 453

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           Y  K G   K     E M +RG+ P     N+ +      GRIS A ++F  +   G   
Sbjct: 454 YYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSP 513

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +YN+L+    K  +++ A  L  EM+S+   P V+  N+L++ L++ G +  A K+ 
Sbjct: 514 DSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF 573

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +++   + P   T+   + GL K G +L+A+++F ++    C     T+N L++ L K 
Sbjct: 574 GRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKN 633

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             +  A K+F R+      PDV+T +T+I+ L +EG++D A      M+ K   P  VT 
Sbjct: 634 DAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTL 692

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           CTL+ G V++ +    + ++ +   +  + ++     ++++ +  + +  E ++
Sbjct: 693 CTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAIS 746



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 240/490 (48%), Gaps = 4/490 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           + V+ FD M K      +T++  +   L+            +++   G   + +  N LI
Sbjct: 149 DMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLI 208

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L   G  + A  V  R++     P+  T++ L+  L   G   +   L +++      
Sbjct: 209 HLLLP-GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLR 267

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+ T+   I  L R R    A  +F+EM +E    C PDV+TY  +ID LC  G +DKA
Sbjct: 268 PNIYTYTICIRALGRARRIDDAWGIFKEMDDEG---CGPDVITYTVLIDALCAAGKLDKA 324

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           KEL ++M+  + +P+ +TY +L+  F  V D +  K  + EM  +G  PDVVT+  +I  
Sbjct: 325 KELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEA 384

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G +D+   +L++M  +G+ P+  TYN+++ G     R+  A EL  +M S G +  
Sbjct: 385 LCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPT 444

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            +SY + I+   K      A+  +  M    I PS+   N  L  L + G + +A  + +
Sbjct: 445 AFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFN 504

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            +    + PDS T+   +    K G + +A Q+   + +  CE  +   N LIN L K G
Sbjct: 505 DLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAG 564

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+  A K+F RL++    P VVT + ++  L KEG++ KA +L   M    C P+ +TF 
Sbjct: 565 RVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFN 624

Query: 544 TLLRGFVQNN 553
           +LL    +N+
Sbjct: 625 SLLDCLSKND 634



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/553 (26%), Positives = 262/553 (47%), Gaps = 37/553 (6%)

Query: 47   IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR 106
            I   +N  +K+G +  + A   F  +  +K +P + ++ ILLT L K  +    + LF  
Sbjct: 553  INSLINTLYKAGRV--DAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGS 610

Query: 107  LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
            +  +G  P+    N L++CL K      A  +  R+      P+ +T+N +I GL  EGR
Sbjct: 611  MTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGR 670

Query: 167  IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---------FG 217
            I  A   F ++  F   P+ VT  TLI G+ R      A+K+  E V++         +G
Sbjct: 671  IDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWG 729

Query: 218  AICK--------PDVVTYNSII--DGLCKDGFV---------DKAKELLLQ------MKD 252
             + +         + +++  I+  + +C+D  V          + K L  Q       K+
Sbjct: 730  ELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKN 789

Query: 253  RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
              I+P + +YN L+ G    +  ++A  LF +M   G  P+  T+N +++ + K  +++K
Sbjct: 790  LGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINK 849

Query: 313  VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
            +  L   M  RG  P+ +T+N ++        +++A +L+  ++S        +Y  LI+
Sbjct: 850  LYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLID 909

Query: 373  ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
               K  + E A+ ++ EML     P+ + YN L++G  + G +  A +L  KM    + P
Sbjct: 910  GLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRP 969

Query: 433  DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
            D  ++   ++ LC  G + EAVQ F+ ++    +    +YN +INGL K  RL  A  LF
Sbjct: 970  DLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLF 1029

Query: 493  HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
              ++++G  PD+ T + +I  L   G++D A  +  +++     PS  T+  L+RG   +
Sbjct: 1030 SEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLS 1089

Query: 553  NKKSKVVVLLHKM 565
              K +   +  KM
Sbjct: 1090 GNKDQAFSVFKKM 1102



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 247/567 (43%), Gaps = 47/567 (8%)

Query: 15   KAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIK 74
            KAG     W  FGR  N K   +        +    L    K G I   +A+  F  M +
Sbjct: 562  KAGRVDAAWKMFGRLKNLKLAPTV------VTYNILLTGLGKEGKIL--KALELFGSMTE 613

Query: 75   MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
                P   +F  LL  L+KN   D  + +F R+      PD+   N +I  L + G    
Sbjct: 614  SGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDY 673

Query: 135  AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC------------ 182
            AF    + ++   +P+ VT   LI G+   GR+ +A ++  +    AC            
Sbjct: 674  AFWFFHQ-MKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELM 732

Query: 183  --------DPNVVTFNT----------------LINGLCRTRNTLVALKLFEEMVNEFGA 218
                        ++F                  LI  LC+ +  L A  +F++     G 
Sbjct: 733  ECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLG- 791

Query: 219  ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
               P + +YN ++DGL    F +KA EL   MK    +PN  TYN L+          + 
Sbjct: 792  -IHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850

Query: 279  KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
              L+ EM   G +P+ +T N +I+   K   ++K   L   ++    +P   TY  L+DG
Sbjct: 851  YDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDG 910

Query: 339  FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
                GR  +A ++F  M+  GC  +   YNILIN   K  +++ A  L+++M+ E IRP 
Sbjct: 911  LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPD 970

Query: 399  VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            + +Y  L+  L   G + +A++  ++++L  + PD+ ++   I+GL K+  + EA+ +F 
Sbjct: 971  LKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFS 1030

Query: 459  AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
             ++N      + TYN LI  L   G++  A K++  LQ  G  P V T + +I      G
Sbjct: 1031 EMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSG 1090

Query: 519  QMDKANDLLLDMEAKNCVPSEVTFCTL 545
              D+A  +   M    C P+  TF  L
Sbjct: 1091 NKDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 254/558 (45%), Gaps = 9/558 (1%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           S   F++   KSG+    +A+  F+ M K    P + +    L  LA+  +      +F 
Sbjct: 447 SYVLFIDYYGKSGD--PAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFN 504

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            L+  GL PD    N+L+ C  K G    A  +L  ++     P+ +  N LIN L   G
Sbjct: 505 DLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAG 564

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           R+  A ++F +L      P VVT+N L+ GL +    L AL+LF  M  E G  C P+ +
Sbjct: 565 RVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMT-ESG--CPPNTI 621

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           T+NS++D L K+  VD A ++  +M   N NP+V+TYN++I G    +   +    F   
Sbjct: 622 TFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLI-REGRIDYAFWFFHQ 680

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKM-DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M   + PD VT   +I    + G++ D +  ++E + Q  +  ++  +  LM+       
Sbjct: 681 MKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAE 740

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYN 403
           I  A      +V      D +    LI   CK +K  DA  ++ +      I P++ +YN
Sbjct: 741 IEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYN 800

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            L+ GL        AL+L + M+     P++FT+   +D   K+  + +   ++  +R+ 
Sbjct: 801 CLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSR 860

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
            CE    T+N +I+ L K   L  A  L++ L      P   T   +I  L K G+ ++A
Sbjct: 861 GCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQA 920

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             +  +M    C P+ V +  L+ GF ++ +      L  KM  E  +  DL   + +V+
Sbjct: 921 MKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEG-IRPDLKSYTILVE 979

Query: 584 LLSKDKKYRECLNQFRHL 601
            L    +  E +  F  L
Sbjct: 980 CLCITGRIDEAVQYFEEL 997



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 193/398 (48%), Gaps = 4/398 (1%)

Query: 87   LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
            L+  +    + +  +S  + L  N +  D  V+  LI  LCK      A  V  +  ++ 
Sbjct: 731  LMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNL 790

Query: 147  -FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
               P   ++N L++GL       +A  LF+ +      PN  T+N L++   +++     
Sbjct: 791  GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850

Query: 206  LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
              L+ EM +     C+P+ +T+N II  L K   ++KA +L  ++   + +P   TY  L
Sbjct: 851  YDLYSEMRSRG---CEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPL 907

Query: 266  ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
            I G       ++A  +F EM+D G  P+ V +N +IN   K G++D    L + M++ G+
Sbjct: 908  IDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGI 967

Query: 326  NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             PD  +Y  L++  C+ GRI  A + F  +   G   D  SYN +IN   K +++++A+ 
Sbjct: 968  RPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALS 1027

Query: 386  LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
            L+ EM +  I P + TYN L+  L   G +  A+K+ +++QL  + P  FT+   I G  
Sbjct: 1028 LFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHS 1087

Query: 446  KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
             +G   +A  VF+ +    C    ET+  L N   + G
Sbjct: 1088 LSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 197/435 (45%), Gaps = 39/435 (8%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F   T   N+++  L  + RI +   +F  +       N+ T+ T+   L        A 
Sbjct: 127 FVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAP 186

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
               +M  E G I   +  +YN +I  L   GF ++A ++  +M    + P++ TY++L+
Sbjct: 187 FALRKMT-EVGFIL--NAYSYNGLIH-LLLPGFCNEALKVYKRMISEGMKPSMKTYSALM 242

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
                  D ++   L  EM   G++P++ T+   I    +  ++D    + + M   G  
Sbjct: 243 VALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCG 302

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSK---------------------------- 358
           PD +TY  L+D  C  G++ +A+EL+V M +                             
Sbjct: 303 PDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRF 362

Query: 359 -------GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
                  G   DV +Y ILI A CK   V+ A  +   M ++ I P++ TYNT++ GL +
Sbjct: 363 WNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLK 422

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
              L +AL+L++ M+   V P +F++  +ID   K+G   +A+  F+ ++       I  
Sbjct: 423 ARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAA 482

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
            N  +  L + GR+  A  +F+ L   G  PD VT + ++    K GQ+DKA  LL +M 
Sbjct: 483 CNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI 542

Query: 532 AKNCVPSEVTFCTLL 546
           +K C P  +   +L+
Sbjct: 543 SKGCEPDVMIINSLI 557



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 32/320 (10%)

Query: 58   GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
            G+  + +A+  F+ M      P   ++ +LL    K+K+ + +  L+  + S G  P+  
Sbjct: 808  GSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAI 867

Query: 118  VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
              N++I+ L K    + A  +   ++   F+P   T+  LI+GL   GR  +A ++F+++
Sbjct: 868  THNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEM 927

Query: 178  NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------------FGAI 219
              + C PN V +N LING  ++     A +LF++MV E                   G I
Sbjct: 928  LDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRI 987

Query: 220  --------------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
                            PD V+YN II+GL K   +D+A  L  +MK+R I+P++ TYN+L
Sbjct: 988  DEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNAL 1047

Query: 266  ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
            I           A  ++ E+   G++P V T+NA+I  +   G  D+   + + M+  G 
Sbjct: 1048 ILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGC 1107

Query: 326  NPDTVTYNSLMDGFCLVGRI 345
            +P+T T+  L + +   G +
Sbjct: 1108 SPNTETFAQLPNKYPRAGLV 1127


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 258/534 (48%), Gaps = 41/534 (7%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +   EA   F  M   +  P   ++  ++      +++D    L +RL   G  P 
Sbjct: 293 KAGRL--GEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPS 350

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N ++ CL K      A  +   +++    PN  T+N +I+ LC  GR+ EA ++  
Sbjct: 351 VVSFNSILTCLGKKRKVDEALTLFD-VMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRD 409

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++ +    PN+++ N +++ LC+      A ++FE   +E G  C P+ VTY S+IDGL 
Sbjct: 410 EMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFES-ASERG--CNPNSVTYCSLIDGLG 466

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC------------------------- 270
           K G +D A  L  +M D   + N I Y SLI  F                          
Sbjct: 467 KKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLT 526

Query: 271 -------CV---DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
                  CV    + ++ + +F +M   G  PDV +++ +I+   K G+  + + + + M
Sbjct: 527 LLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAM 586

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            Q+G   D   YN+++DG C  G++ +A E+   M  K     V +Y  +++   K  ++
Sbjct: 587 SQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRL 646

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A  L+ E  S+ I  +VI Y++L+ G  +VG + +A  ++++M    + P+ +T+ + 
Sbjct: 647 DEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 706

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           +D L K   + EA+  FQ+++  KC     TY+ LINGLC++ +   A   +  +Q +G 
Sbjct: 707 MDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 766

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           IP+VVT +TMI  L K G +  A  L    +    +P   +F  L+ G    N+
Sbjct: 767 IPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANR 820



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 240/497 (48%), Gaps = 74/497 (14%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  FD M K    P ++++ I++ ML    + +    +   +   GLFP+L  +N++
Sbjct: 368 DEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIM 426

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           ++ LCK      A  +          PN+VT+  LI+GL  +G+I +A RLF+K+     
Sbjct: 427 VDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGH 486

Query: 178 ------------NVF------------------ACDPNVVTFNT---------------- 191
                       N F                     P++   NT                
Sbjct: 487 DANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRA 546

Query: 192 -------------------LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
                              LI+GL +         +F+ M  +  A+   D   YN+++D
Sbjct: 547 IFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFAL---DARAYNAVVD 603

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           GLCK G VDKA E+L +MK ++++P V TY S++ G   +D   EA  LF E    G++ 
Sbjct: 604 GLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIEL 663

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +V+ ++++I+   K G++D+   +LE M+++G+ P+  T+NSLMD       I  A   F
Sbjct: 664 NVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICF 723

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
            SM    C  + Y+Y+ILIN  C+ QK   A   ++EM  + + P+V+TY T++SGL +V
Sbjct: 724 QSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKV 783

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           GN+ DA  L ++ + N  +PDS +F   I+G+      +EA QVF+  R   C L ++T 
Sbjct: 784 GNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTC 843

Query: 473 NCLINGLCKMGRLKTAC 489
             L++ L K   L+ A 
Sbjct: 844 ISLLDALNKTECLEQAA 860



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 257/518 (49%), Gaps = 5/518 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           FT L+  LA+  Q +  ++L   +  + L PD+ + N+ I+C  K G    A+     + 
Sbjct: 214 FTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELK 273

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                P+ V++  ++  LC  GR+ EA  LF ++      P    +NT+I G        
Sbjct: 274 AHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFD 333

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A KL E +  E G  C P VV++NSI+  L K   VD+A  L   MK ++  PN+ TYN
Sbjct: 334 DAYKLLERL-RERG--CIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYN 389

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            +I   C      EA  +  EM   G+ P++++ N M++  CK  ++++ +R+ E   +R
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G NP++VTY SL+DG    G+I  A  LF  M+  G   +   Y  LI       + ED 
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDG 509

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             +Y+EM+    RP +   NT +  +F+ G +     + + M+    +PD  +++  I G
Sbjct: 510 HKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHG 569

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           L K G   E   +FQA+      L    YN +++GLCK G++  A ++   ++ K   P 
Sbjct: 570 LTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPT 629

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           V T  +++  L K  ++D+A  L  + ++K    + + + +L+ GF +  +  +  ++L 
Sbjct: 630 VATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILE 689

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +M  + L  +  + +S ++D L K ++  E L  F+ +
Sbjct: 690 EMMKKGLTPNVYTWNS-LMDALVKTEEIDEALICFQSM 726



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 239/488 (48%), Gaps = 4/488 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P +  + + +    K    D     F  L ++GL PD      ++  LCK G    A  
Sbjct: 243 EPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEE 302

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           + G++      P    +N +I G  +  R  +A +L ++L    C P+VV+FN+++  L 
Sbjct: 303 LFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLG 362

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + R    AL LF+ M  +     KP++ TYN IID LC  G V++A ++  +M+   + P
Sbjct: 363 KKRKVDEALTLFDVMKKD----AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFP 418

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N+++ N ++   C  +  +EA  +F    + G  P+ VT+ ++I+   K GK+D   RL 
Sbjct: 419 NLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLF 478

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M+  G + + + Y SL+  F + GR     +++  M+ +G R D+   N  ++   K 
Sbjct: 479 EKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKA 538

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +VE    ++ +M S    P V +Y+ L+ GL + G   +   +   M       D+  +
Sbjct: 539 GEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAY 598

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              +DGLCK+G V +A +V + ++       + TY  +++GL K+ RL  A  LF   + 
Sbjct: 599 NAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKS 658

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           KG   +V+  S++I    K G++D+A  +L +M  K   P+  T+ +L+   V+  +  +
Sbjct: 659 KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDE 718

Query: 558 VVVLLHKM 565
            ++    M
Sbjct: 719 ALICFQSM 726



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/546 (23%), Positives = 256/546 (46%), Gaps = 43/546 (7%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P+P   +   L+  L ++++ +    +   +      P      +LI  L +      A 
Sbjct: 140 PNPACAA---LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERAL 196

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +L ++    +  +   F  L+  L  EG++  A  L  ++     +P++V +N  I+  
Sbjct: 197 ELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCF 256

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
            +  +  +A K F E+    G   +PD V+Y S++  LCK G + +A+EL  QM+     
Sbjct: 257 GKAGSVDMAWKFFHEL-KAHG--LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDV 313

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P    YN++I G+   + + +A  L   + + G  P VV+FN+++    K  K+D+   L
Sbjct: 314 PCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTL 373

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
            ++M ++   P+  TYN ++D  C+ GR++ A ++   M   G   ++ S NI+++  CK
Sbjct: 374 FDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCK 432

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-----QLNDVV 431
             ++E+A  ++         P+ +TY +L+ GL + G + DA +L +KM       N ++
Sbjct: 433 ANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPII 492

Query: 432 ------------------------------PDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
                                         PD     TY+D + K G V +   +F+ ++
Sbjct: 493 YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMK 552

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +      + +Y+ LI+GL K G+ +    +F  +  +G   D    + ++  LCK G++D
Sbjct: 553 SFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVD 612

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           KA ++L +M+ K+  P+  T+ +++ G  + ++  +  +L  + A  K +  ++ L S +
Sbjct: 613 KAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE-AKSKGIELNVILYSSL 671

Query: 582 VDLLSK 587
           +D   K
Sbjct: 672 IDGFGK 677



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 221/482 (45%), Gaps = 10/482 (2%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+  L +      AF V+G +    F P    +  LI  L    +   A  L +++    
Sbjct: 147 LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVG 206

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            + +V  F TL+  L R      AL L +E+    G+  +PD+V YN  ID   K G VD
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVK---GSCLEPDIVLYNVCIDCFGKAGSVD 263

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A +   ++K   + P+ ++Y S++   C      EA+ LF +M      P    +N MI
Sbjct: 264 MAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMI 323

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
                  + D   +LLE + +RG  P  V++NS++       ++  A  LF  ++ K  +
Sbjct: 324 MGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAK 382

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            ++ +YNI+I+  C   +V +A  +  EM    + P++++ N ++  L +   L +A ++
Sbjct: 383 PNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRI 442

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            +        P+S T+ + IDGL K G + +A ++F+ + +   +     Y  LI     
Sbjct: 443 FESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFM 502

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            GR +   K++  +  +G  PD+   +T +  + K G+++K   +  DM++   +P   +
Sbjct: 503 HGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRS 562

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK----DKKYRECLNQ 597
           +  L+ G  +  +  +   +   M+ +   + D    + VVD L K    DK Y E L +
Sbjct: 563 YSILIHGLTKAGQARETSNIFQAMSQQGFAL-DARAYNAVVDGLCKSGKVDKAY-EVLEE 620

Query: 598 FR 599
            +
Sbjct: 621 MK 622


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 161/534 (30%), Positives = 248/534 (46%), Gaps = 48/534 (8%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQY--DTVVSLFKRLNSNGLF 113
           KSG   + +A++  D M +      +T   +   ++   + +    VV L  +L   G+F
Sbjct: 186 KSGR--AGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVF 243

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILR--------SC------------------- 146
           PD F L  L+  LC       A+ VL  ++R        SC                   
Sbjct: 244 PDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNEL 303

Query: 147 --------FTPNTVTFNFLINGLCAEGRIMEAARLFKKL------NVFACDPNVVTFNTL 192
                     P+ VTF  L+N LC   RI EA ++F +L      N    +P+VV FNTL
Sbjct: 304 LAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTL 363

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           I+GLC+       L L EEM  + G I +P+ VTYN +IDG  K G  D+A EL  QM +
Sbjct: 364 IDGLCKVGKEEDGLSLLEEM--KMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNE 421

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
             + PNVIT N+L+ G C       A   F EM   G++ +  T+ A+I+  C    +++
Sbjct: 422 EGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINR 481

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             +  E M+  G +PD V Y SL+ G C+ GR++ A  +   +   G   D   YN+LI+
Sbjct: 482 AMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLIS 541

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             CK +K+E    L  EM    ++P  ITYNTL+S L + G+   A K+++KM    + P
Sbjct: 542 GFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRP 601

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNCLINGLCKMGRLKTACKL 491
              T+   I   C    V E +++F  +    K       YN LI+ LC+   +  A  L
Sbjct: 602 SVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISL 661

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
              ++ K   P+  T + ++  +  +  + KA +L+  M  + C P  +T   L
Sbjct: 662 MEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVL 715



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 204/419 (48%), Gaps = 40/419 (9%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL------NSNGLFPDLFVLNLLINC 125
           M K K  P + +F IL+  L K ++ D  + +F RL      N  G+ PD+ + N LI+ 
Sbjct: 307 MEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDG 366

Query: 126 LCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
           LCK+G       +L  + + +   PNTVT+N LI+G    G    A  LF+++N     P
Sbjct: 367 LCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQP 426

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEM---------------VNEFGAI---------- 219
           NV+T NTL++GLC+      A++ F EM               ++ F  +          
Sbjct: 427 NVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCF 486

Query: 220 -------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                  C PD V Y S+I GLC  G ++ A  ++ ++K    + +   YN LI GFC  
Sbjct: 487 EEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKK 546

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
              +    L  EM + GV+PD +T+N +I+Y  K G     ++++E MI+ G+ P  VTY
Sbjct: 547 KKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTY 606

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREML 391
            +++  +C    +    ++F  M S      +   YNILI+A C++  V+ A+ L  +M 
Sbjct: 607 GAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMK 666

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
            +R+RP+  TYN +L G+     L  A +L+D+M      PD  T     + L   G +
Sbjct: 667 VKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEI 725



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 228/477 (47%), Gaps = 16/477 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S ++LL  L   +  +  + LF +L+ +   P L   + L+  L K G    A  VL  +
Sbjct: 143 SASLLLQCLENARLVNDSLLLFNQLDPSSKSPQL--CHGLLRVLLKSGRAGDALHVLDEM 200

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIM---EAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
            ++  +  +VT   +   L   GR     E   L  KL      P+      L+  LC  
Sbjct: 201 PQAN-SGFSVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGD 259

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
           +   VA ++   ++   GA+   D  + N+++  L +   + +  ELL +M+ R I P+V
Sbjct: 260 QKNGVAWEVLHCVMRLGGAV---DAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSV 316

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNG------VQPDVVTFNAMINYNCKDGKMDKV 313
           +T+  L+   C      EA  +F  +   G      V+PDVV FN +I+  CK GK +  
Sbjct: 317 VTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDG 376

Query: 314 NRLLELMIQRGVN-PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             LLE M    +N P+TVTYN L+DGF   G   RA ELF  M  +G + +V + N L++
Sbjct: 377 LSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVD 436

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             CK  +V  AV  + EM  + ++ +  TY  L+S    V N+  A++  ++M  +   P
Sbjct: 437 GLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSP 496

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D+  + + I GLC  G + +A  V   ++     L    YN LI+G CK  +L+   +L 
Sbjct: 497 DAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELL 556

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
             ++  G  PD +T +T+I +L K G    A+ ++  M  +   PS VT+  ++  +
Sbjct: 557 TEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAY 613



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 6/290 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + AV FF+ M          ++T L++        +  +  F+ + S+G  PD  V   L
Sbjct: 445 HRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSL 504

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC  G  + A VV+ ++  + F+ +   +N LI+G C + ++     L  ++     
Sbjct: 505 ISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGV 564

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ +T+NTLI+ L +T +   A K+ E+M+ E     +P VVTY +II   C    VD+
Sbjct: 565 KPDTITYNTLISYLGKTGDFATASKVMEKMIKEG---LRPSVVTYGAIIHAYCSKKNVDE 621

Query: 243 AKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
             ++  +M     + PN + YN LI   C  +D   A  L  +M    V+P+  T+NA++
Sbjct: 622 GMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAIL 681

Query: 302 NYNCKDGKM-DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
               +D KM  K   L++ M++    PD +T   L +    VG I + + 
Sbjct: 682 K-GVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKH 730



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 43/228 (18%)

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLC---KNGFVLEAV------------------ 454
           G+ + L+ K+    V PD F     +  LC   KNG   E +                  
Sbjct: 228 GEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNAL 287

Query: 455 --------------QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
                         ++   +   K    + T+  L+N LCK  R+  A ++F RL+ KG 
Sbjct: 288 LTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGG 347

Query: 501 I------PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC-VPSEVTFCTLLRGFVQNN 553
                  PDVV  +T+I  LCK G+ +    LL +M+  N   P+ VT+  L+ GF +  
Sbjct: 348 SNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAG 407

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              +   L  +M  E +  + ++L++ +VD L K  +    +  F  +
Sbjct: 408 NFDRAHELFRQMNEEGVQPNVITLNT-LVDGLCKHGRVHRAVEFFNEM 454


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 268/532 (50%), Gaps = 37/532 (6%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + S+  LL    + KQ+  V SLF    + G+ P+L   N+LI   CK      A  
Sbjct: 111 EPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            L  + +  F P+  +++ +IN L   G++ +A  LF +++     P+V  +N LI+G  
Sbjct: 171 FLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230

Query: 198 RTRNTLVALKLFEEMVNE-------------FGAICK--------------------PDV 224
           + ++   A++L++ ++ +                + K                     D+
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL 290

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
            TY+S+I GLC  G VDKA+ +  ++ +R  + +V+TYN+++ GFC     KE+  L+  
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-R 349

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           +M++    ++V++N +I    ++GK+D+   +  LM  +G   D  TY   + G C+ G 
Sbjct: 350 IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +++A  +   + S G   DVY+Y  +I+  CK +++E+A  L +EM    +  +    N 
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ GL +   LG+A   + +M  N   P   ++   I GLCK G   EA    + +    
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +  ++TY+ L+ GLC+  ++  A +L+H+    G   DV+  + +IH LC  G++D A 
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQ---NNKKSKVVVLLHKMAAEKLVVS 573
            ++ +ME +NC  + VT+ TL+ GF +   +N+ + +   ++KM  +  ++S
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIIS 641



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 248/509 (48%), Gaps = 7/509 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  +ND  K+G +  ++A+  FD M +   +P +T + IL+    K K + T + 
Sbjct: 183 DVFSYSTVINDLAKAGKL--DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME 240

Query: 103 LFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           L+ RL   + ++P++   N++I+ L K G       +  R+ ++    +  T++ LI+GL
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  G + +A  +F +L+      +VVT+NT++ G CR      +L+L+  M ++      
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV--- 357

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
            ++V+YN +I GL ++G +D+A  +   M  +    +  TY   I G C      +A  +
Sbjct: 358 -NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             E+  +G   DV  + ++I+  CK  ++++ + L++ M + GV  ++   N+L+ G   
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             R+  A      M   GCR  V SYNILI   CK  K  +A    +EML    +P + T
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+ LL GL +   +  AL+L  +   + +  D       I GLC  G + +A+ V   + 
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +  C   + TYN L+ G  K+G    A  ++  +   G  PD+++ +T++  LC    + 
Sbjct: 597 HRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVS 656

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
            A +   D       P+  T+  L+R  V
Sbjct: 657 YAMEFFDDARNHGIFPTVYTWNILVRAVV 685



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 223/455 (49%), Gaps = 6/455 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P   ++N L+N      + ++   LF         PN+ T+N LI   C+ +    A   
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            + M  E     KPDV +Y+++I+ L K G +D A EL  +M +R + P+V  YN LI G
Sbjct: 172 LDWMWKEG---FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228

Query: 269 FCCVDDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           F    D K A  L+  ++ D+ V P+V T N MI+   K G++D   ++ E M Q     
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  TY+SL+ G C  G + +A  +F  +  +    DV +YN ++   C+  K+++++ L+
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           R ++  +   ++++YN L+ GL + G + +A  +   M       D  T+  +I GLC N
Sbjct: 349 R-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G+V +A+ V Q + +    L +  Y  +I+ LCK  RL+ A  L   +   G   +   C
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + +I  L ++ ++ +A+  L +M    C P+ V++  L+ G  +  K  +    + +M  
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM-L 526

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           E     DL   S ++  L +D+K    L  +   L
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 230/485 (47%), Gaps = 16/485 (3%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           ++    KN   D  + +FKR+    G  P +   N L+N   +         +      +
Sbjct: 84  VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
              PN  T+N LI   C +    +A      +      P+V +++T+IN L +      A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNS 264
           L+LF+EM +E G    PDV  YN +IDG  K+     A EL  ++ +D ++ PNV T+N 
Sbjct: 204 LELFDEM-SERGV--APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260

Query: 265 LICGFC-C--VDDWKEAKCLFI--EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +I G   C  VDD     CL I   M  N  + D+ T++++I+  C  G +DK   +   
Sbjct: 261 MISGLSKCGRVDD-----CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           + +R  + D VTYN+++ GFC  G+I  + EL+  M  K    ++ SYNILI    ++ K
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGK 374

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +++A  ++R M ++       TY   + GL   G +  AL ++ +++ +    D + +A+
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            ID LCK   + EA  + + +     EL     N LI GL +  RL  A      +   G
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P VV+ + +I  LCK G+  +A+  + +M      P   T+  LL G  ++ K    +
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554

Query: 560 VLLHK 564
            L H+
Sbjct: 555 ELWHQ 559



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 93/206 (45%), Gaps = 2/206 (0%)

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           S + Y+ +L  L +   +    ++++ ++  +   D     + I    KN    +A+ VF
Sbjct: 42  SAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVF 101

Query: 458 QAIRNC-KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           + +R    CE  I +YN L+N   +  +      LF   +  G  P++ T + +I   CK
Sbjct: 102 KRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCK 161

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           + + +KA   L  M  +   P   ++ T++    +  K    + L  +M +E+ V  D++
Sbjct: 162 KKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM-SERGVAPDVT 220

Query: 577 LSSKVVDLLSKDKKYRECLNQFRHLL 602
             + ++D   K+K ++  +  +  LL
Sbjct: 221 CYNILIDGFLKEKDHKTAMELWDRLL 246


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 254/490 (51%), Gaps = 4/490 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M+     P + +F+ L+    K +  +TV SL + + S GL P+++   + I
Sbjct: 212 EALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICI 271

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L + G    A  ++ R+      P+ VT+  LI+ LC  G++ +A  LF K+   +  
Sbjct: 272 RVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHK 331

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ T+++      +     + + EM  +  A   PDV+T+  +++ LCK G +D+A
Sbjct: 332 PDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYA---PDVITFTILVNALCKAGNIDEA 388

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL  M+ + + PN+ TYN+LI G   V+   +A  LF  M   GV P   T+   I++
Sbjct: 389 FHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDF 448

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G+ DK     E M  RG+ P+ V  N+ +     +GR+  A+ +F  + S G   D
Sbjct: 449 YGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPD 508

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN+++    K  +V++A+ L  +M   +  P +I  N+L++ L++ G + +A K+  
Sbjct: 509 SVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFC 568

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +++   + P   T+ T I GL K G V  A+++F ++    C     T+N +++ LCK  
Sbjct: 569 RLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKND 628

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A K+ +++     +PDV+T +T+IH L  E ++  A  L   M+ K   P  VT C
Sbjct: 629 EVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLC 687

Query: 544 TLLRGFVQNN 553
           TLL G V+N 
Sbjct: 688 TLLPGVVKNG 697



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 236/462 (51%), Gaps = 3/462 (0%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
           F ++   G   + +  N LI+ L + G+   A  +  R++     P+  TF+ L+     
Sbjct: 182 FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGK 241

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
                    L +++      PN+ T+   I  L R      A ++ + M ++    C PD
Sbjct: 242 RRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDG---CGPD 298

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           VVTY  +ID LC  G +D A EL ++MK  +  P+ +TY +++  F    D    K  + 
Sbjct: 299 VVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWS 358

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM  +G  PDV+TF  ++N  CK G +D+   LL++M ++GV P+  TYN+L+ G   V 
Sbjct: 359 EMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVN 418

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           R+  A +LF +M + G     Y+Y + I+   K  + + A+  + +M    I P+++  N
Sbjct: 419 RLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACN 478

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
             L  L ++G L +A  + ++++ N + PDS T+   +    K G V EA+++   +   
Sbjct: 479 ASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSEN 538

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           +CE  I   N LIN L K GR+  A K+F RL+     P VVT +T+I  L KEGQ+ +A
Sbjct: 539 QCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRA 598

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +L   M    C P+ +TF T+L    +N++    + +L+KM
Sbjct: 599 MELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKM 640



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 162/568 (28%), Positives = 257/568 (45%), Gaps = 72/568 (12%)

Query: 47   IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR 106
            I   +N  +K+G +  +EA   F  +  MK +P + ++  L+  L K  Q    + LF  
Sbjct: 547  INSLINTLYKAGRV--DEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFAS 604

Query: 107  LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
            +  NG  P+    N +++CLCK      A  +L ++      P+ +TFN +I+GL  E R
Sbjct: 605  MTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKR 664

Query: 167  IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK----- 221
            + +A  LF ++      P+ VT  TL+ G+ +      A K+ E+ V+  G         
Sbjct: 665  VSDAIWLFHQMKKMLT-PDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWE 723

Query: 222  -------PDVVTYNSIIDG-------LCKDGFVD--------KAKELLLQM-------KD 252
                       T  +I+ G       +CKDG V         K K+ L+         K+
Sbjct: 724  DLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKE 783

Query: 253  RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
              + P + +YN LI GF  V + + A  LF EM + G  PDV T+N +++ + K GK+++
Sbjct: 784  LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINE 843

Query: 313  VNRLLELMIQRGVNPDTVTYN-----------------------------------SLMD 337
            +  L E MI     P+T+T+N                                    L+D
Sbjct: 844  LFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLD 903

Query: 338  GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            G    GR+  A+ELF  MV  GCR +   YNILIN   K   V  A  L++ M+ E IRP
Sbjct: 904  GLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRP 963

Query: 398  SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
             + +Y +L+  L + G + DAL   +K++   +  DS  +   IDGL ++  + EA+ ++
Sbjct: 964  DLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLY 1023

Query: 458  QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
              +++      + TYN LI  L   G ++ A KL+  LQ  G  P+V T + +I      
Sbjct: 1024 DEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMS 1083

Query: 518  GQMDKANDLLLDMEAKNCVPSEVTFCTL 545
            G  D A  +   M    C P+  TF  L
Sbjct: 1084 GNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 159/607 (26%), Positives = 275/607 (45%), Gaps = 78/607 (12%)

Query: 50   FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            F++   KSG   S++A+  F+ M     +P + +    L  LA+  +      +F RL S
Sbjct: 445  FIDFYGKSGR--SDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKS 502

Query: 110  NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            NGL PD    N+++ C  K G    A  +L  +  +   P+ +  N LIN L   GR+ E
Sbjct: 503  NGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDE 562

Query: 170  AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
            A ++F +L      P VVT+NTLI GL +      A++LF  M    G  C P+ +T+N+
Sbjct: 563  AWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMT---GNGCPPNTITFNT 619

Query: 230  IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
            I+D LCK+  VD A ++L +M   N  P+V+T+N++I G        +A  LF   M   
Sbjct: 620  ILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLF-HQMKKM 678

Query: 290  VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR-GVNPDTVTYNSLMDGF--------- 339
            + PD VT   ++    K+G M+   ++ E  + R GV  D   +  LM G          
Sbjct: 679  LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKT 738

Query: 340  ------CLVGRISRARELFVSMVSKGCRHD---------------------VYSYNILI- 371
                   + GR+ +   + + ++   C+H                      + SYN LI 
Sbjct: 739  ILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIE 798

Query: 372  -------------------NANC---------------KDQKVEDAVCLYREMLSERIRP 397
                               NA C               K  K+ +   LY +M+    +P
Sbjct: 799  GFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKP 858

Query: 398  SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            + IT+N +++ L +  +L  AL L   +   D  P   T+   +DGL K+G + EA ++F
Sbjct: 859  NTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELF 918

Query: 458  QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
            + + +  C      YN LING  K G + TAC+LF R+  +G  PD+ + ++++  LC+ 
Sbjct: 919  EEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEA 978

Query: 518  GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
            G++D A      ++        + +  ++ G  ++++  + + L  +M +  +     + 
Sbjct: 979  GRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTY 1038

Query: 578  SSKVVDL 584
            +S +++L
Sbjct: 1039 NSLILNL 1045



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 254/554 (45%), Gaps = 19/554 (3%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GNI  +EA +  D M K    P + ++  L++ L +  + D  + LF  + + G+ P 
Sbjct: 381 KAGNI--DEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +   L I+   K G +  A     ++      PN V  N  +  L   GR+ EA  +F 
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFN 498

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +L      P+ VT+N ++    +      A++L  +M       C+PD++  NS+I+ L 
Sbjct: 499 RLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSEN---QCEPDIIVINSLINTLY 555

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G VD+A ++  ++KD  + P V+TYN+LI G       + A  LF  M  NG  P+ +
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTI 615

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           TFN +++  CK+ ++D   ++L  M      PD +T+N+++ G  +  R+S A  LF  M
Sbjct: 616 TFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM 675

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT--YNTLLSGLFQVG 413
             K    D  +   L+    K+  +EDA  +  + +  R+   V    +  L+ G+    
Sbjct: 676 -KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFV-HRLGVYVDRRFWEDLMGGILTQA 733

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCELRIETY 472
                +   D++    V  D       I  LCK+   L A  VF +  +    +  +E+Y
Sbjct: 734 GTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESY 793

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI G   +   + A  LF  +++ G  PDV T + ++    K G++++  +L   M  
Sbjct: 794 NFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMIC 853

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS----SKVVDLLSKD 588
            +C P+ +T   ++   V++N   K + L +      LV  D S +      ++D L K 
Sbjct: 854 SSCKPNTITHNIIIANLVKSNSLDKALDLFY-----DLVSGDFSPTPCTYGPLLDGLLKS 908

Query: 589 KKYRECLNQFRHLL 602
            +  E    F  ++
Sbjct: 909 GRLEEAKELFEEMV 922



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 200/392 (51%), Gaps = 7/392 (1%)

Query: 70  DCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           +  +KMK S   P   ++  +L   +       V   +  + ++G  PD+    +L+N L
Sbjct: 320 ELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNAL 379

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           CK G    AF +L  + +    PN  T+N LI+GL    R+ +A  LF  +      P  
Sbjct: 380 CKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTA 439

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
            T+   I+   ++  +  AL+ FE+M  +   I  P++V  N+ +  L + G + +AK +
Sbjct: 440 YTYILFIDFYGKSGRSDKALETFEKM--KIRGIA-PNIVACNASLYSLAEMGRLREAKVI 496

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
             ++K   + P+ +TYN ++  +       EA  L  +M +N  +PD++  N++IN   K
Sbjct: 497 FNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYK 556

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G++D+  ++   +    + P  VTYN+L+ G    G++ RA ELF SM   GC  +  +
Sbjct: 557 AGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTIT 616

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           +N +++  CK+ +V+ A+ +  +M +    P V+T+NT++ GL     + DA+ L  +M+
Sbjct: 617 FNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK 676

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              + PD  T  T + G+ KNG + +A ++ +
Sbjct: 677 -KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAE 707



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 176/364 (48%), Gaps = 4/364 (1%)

Query: 115  DLFVLNLLINCLCKMGITSGAFVVLGRILRSC-FTPNTVTFNFLINGLCAEGRIMEAARL 173
            D  VL  +I  LCK      A  V  R  +     P   ++NFLI G         A  L
Sbjct: 753  DGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNL 812

Query: 174  FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            F ++    C P+V T+N L++   ++       +L+E+M+    + CKP+ +T+N II  
Sbjct: 813  FTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMI---CSSCKPNTITHNIIIAN 869

Query: 234  LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            L K   +DKA +L   +   + +P   TY  L+ G       +EAK LF EM+D G +P+
Sbjct: 870  LVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPN 929

Query: 294  VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
               +N +IN   K G ++    L + M++ G+ PD  +Y SL+   C  GR+  A   F 
Sbjct: 930  NAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFE 989

Query: 354  SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
             +   G   D  +YN++I+   +  ++E+A+ LY EM S  I P + TYN+L+  L   G
Sbjct: 990  KLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAG 1049

Query: 414  NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
             +  A KL +++Q   + P+ FT+   I G   +G    A  V++ +    C     T+ 
Sbjct: 1050 MVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFA 1109

Query: 474  CLIN 477
             L N
Sbjct: 1110 QLPN 1113



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 133/286 (46%), Gaps = 1/286 (0%)

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           +  LM  + +  D  TY  +  G  + G + +    F  M   G   + YSYN LI+   
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           +     +A+ +YR M+ E ++PS+ T++ L+    +  +      L+++M+   + P+ +
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIY 265

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+   I  L + G + EA ++ + + +  C   + TY  LI+ LC  G+L  A +LF ++
Sbjct: 266 TYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKM 325

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +     PD VT  TM+      G + +  +   +MEA    P  +TF  L+    +    
Sbjct: 326 KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNI 385

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            +   LL  M  +  V+ +L   + ++  L +  +  + L+ F ++
Sbjct: 386 DEAFHLLDVMRKQG-VLPNLHTYNTLISGLLRVNRLDDALDLFNNM 430



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 42/258 (16%)

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
           S A   FV   ++ C H +    I        ++V D V ++  M ++ I+  + TY  +
Sbjct: 113 SVAEMPFVVHTTETCNHMLEILRI-------HRRVGDMVVVFNLMQNQIIKRDLNTYLII 165

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ--AIRNC 463
             GLF  G L        KM+      +++++   I  L ++G   EA+++++   +   
Sbjct: 166 FKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGL 225

Query: 464 KCELR---------------------------------IETYNCLINGLCKMGRLKTACK 490
           K  L+                                 I TY   I  L + GR+  AC+
Sbjct: 226 KPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACR 285

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           +  R++  G  PDVVT + +I  LC  G++D A +L + M+A +  P  VT+ T+L  F 
Sbjct: 286 IMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFS 345

Query: 551 QNNKKSKVVVLLHKMAAE 568
                 +V     +M A+
Sbjct: 346 DCGDLGRVKEFWSEMEAD 363


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 261/538 (48%), Gaps = 5/538 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEAV  F+ M + K  P   ++  ++       +++   SL +R    G  P +   N +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++CL + G    A      + +    PN  T+N +I+ LC  G++  A  +   +     
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV+T N +++ LC+ +    A  +FE + ++    C+PD VTY S+I+GL + G VD+
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK---TCRPDAVTYCSLIEGLGRHGRVDE 497

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  QM D N  PN + Y SLI  F      ++   ++ EM+  G  PD++  N  ++
Sbjct: 498 AYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMD 557

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G+++K   L + +   G  PD  +Y  L+ G    G    A ELF +M  +GC  
Sbjct: 558 CVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVL 617

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +YN +I+  CK  KV  A  L  EM ++   P+V+TY +++ GL ++  L +A  L 
Sbjct: 618 DTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLF 677

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++ +   +  +   +++ IDG  K G + EA  + + +        + T+NCL++ L K 
Sbjct: 678 EEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 737

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             +  A   F  ++     P+ +T S +IH LCK  + +KA     +M+ +   P+  T+
Sbjct: 738 EEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTY 797

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRH 600
            T++ G  +     +   L  K   EK  V+D ++ + +++ LS   +  +    F  
Sbjct: 798 TTMISGLAKAGNIVEADTLFEKF-KEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 231/489 (47%), Gaps = 33/489 (6%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+  +L+ L +  Q D  +  F+ +  + + P+L   N++I+ LCK G    A VV
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVV 431

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +  +   PN +T N +++ LC   R+ +A  +F+ L+   C P+ VT+ +LI GL R
Sbjct: 432 RDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491

Query: 199 TRNTLVALKLFEEMV-------------------------------NEFGAI-CKPDVVT 226
                 A KL+E+M+                               NE   + C PD++ 
Sbjct: 492 HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLL 551

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
            N+ +D + K G ++K + L  ++K+    P+  +Y  LI G        EA  LF  M 
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           + G   D   +N +I+  CK GK++K  +LLE M  +G  P  VTY S++DG   + R+ 
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  LF    SKG   +V  Y+ LI+   K  ++++A  +  E++ + + P+V T+N LL
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
             L +   + +AL     M+     P+  T++  I GLCK     +A   +Q ++    +
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + TY  +I+GL K G +  A  LF + + KG + D    + +I  L    +   A  L
Sbjct: 792 PNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRL 851

Query: 527 LLDMEAKNC 535
             +   K C
Sbjct: 852 FEEARLKGC 860



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 269/570 (47%), Gaps = 34/570 (5%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA  F   M K+K  P  +++T L+  L+ ++  D +++LF+++   G   ++ +   LI
Sbjct: 183 EAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLI 242

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
               + G    A  +L  +  +   P+ V +N  I+     G++  A + F ++      
Sbjct: 243 RVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLV 302

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEE---------------MVNEFGAI--------- 219
            + VT+ ++I  LC+      A++LFE                M+  +G           
Sbjct: 303 LDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSL 362

Query: 220 --------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
                   C P VV+YN I+  L + G VD+A +   +MK   I PN+ TYN +I   C 
Sbjct: 363 LERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCK 421

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
               + A  +   M D G+ P+V+T N M++  CK  ++D    + E +  +   PD VT
Sbjct: 422 AGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVT 481

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y SL++G    GR+  A +L+  M+      +   Y  LI    K  + ED   +Y EML
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
                P ++  NT +  +F+ G +     L  +++    +PD+ ++   I GL K GF  
Sbjct: 542 RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAH 601

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           EA ++F  ++   C L    YN +I+G CK G++  A +L   ++ KG  P VVT  ++I
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             L K  ++D+A  L  + ++K    + V + +L+ GF +  +  +  +++ ++  +K +
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL-MQKGL 720

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             ++   + ++D L K ++  E L  F+ +
Sbjct: 721 TPNVYTWNCLLDALVKAEEISEALVCFQSM 750



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 238/496 (47%), Gaps = 39/496 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F+ M K    P ++++ I++ ML K  + +T + +   +   GLFP++  +N++
Sbjct: 392 DEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIM 450

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           ++ LCK      A  +   +      P+ VT+  LI GL   GR+ EA +L++++     
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 178 ------------NVF------------------ACDPNVVTFNTLINGLCRTRNTLVALK 207
                       N F                   C P+++  NT ++ + +         
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           LF+E+ N  G I  PD  +Y  +I GL K GF  +A EL   MK++    +   YN++I 
Sbjct: 571 LFQEIKN-LGFI--PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVID 627

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GFC      +A  L  EM   G +P VVT+ ++I+   K  ++D+   L E    +G+  
Sbjct: 628 GFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIEL 687

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + V Y+SL+DGF  VGRI  A  +   ++ KG   +VY++N L++A  K +++ +A+  +
Sbjct: 688 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCF 747

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           + M   +  P+ ITY+ L+ GL ++     A     +MQ     P+ FT+ T I GL K 
Sbjct: 748 QSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKA 807

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G ++EA  +F+  +          YN +I GL    R   A +LF   + KG      TC
Sbjct: 808 GNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTC 867

Query: 508 STMIHWLCKEGQMDKA 523
             ++  L K   +++A
Sbjct: 868 VVLLDSLHKAECIEQA 883



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 177/379 (46%), Gaps = 6/379 (1%)

Query: 188 TFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
            +N+L+  + RTR      ++ EEM +  FG    P   T   I+    K   + +A   
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFG----PSNNTCIEIVLSFIKSRKLREAFTF 187

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           +  M+     P    Y +LI       D      LF +M + G   +V  F  +I    +
Sbjct: 188 IQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAR 247

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G++D    LL+ M    + PD V YN  +D F   G++  A + F  M + G   D  +
Sbjct: 248 EGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVT 307

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y  +I   CK  ++ +AV L+  M   +  P    YNT++ G    G   DA  L+++ +
Sbjct: 308 YTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQR 367

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
               +P   ++   +  L + G V EA++ F+ ++       + TYN +I+ LCK G+L+
Sbjct: 368 RKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLE 426

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           TA  +   ++  G  P+V+T + M+  LCK  ++D A  +   ++ K C P  VT+C+L+
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486

Query: 547 RGFVQNNKKSKVVVLLHKM 565
            G  ++ +  +   L  +M
Sbjct: 487 EGLGRHGRVDEAYKLYEQM 505



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 154/329 (46%), Gaps = 5/329 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G I    A+  F  +  +   P   S+TIL+  L K         LF  +   G   D
Sbjct: 561 KAGEIEKGRAL--FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLD 618

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N +I+  CK G  + A+ +L  +      P  VT+  +I+GL    R+ EA  LF+
Sbjct: 619 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFE 678

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +      + NVV +++LI+G  +      A  + EE++ +      P+V T+N ++D L 
Sbjct: 679 EAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG---LTPNVYTWNCLLDALV 735

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   + +A      MKD    PN ITY+ LI G C +  + +A   + EM   G +P+V 
Sbjct: 736 KAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVF 795

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  MI+   K G + + + L E   ++G   D+  YN++++G     R S A  LF   
Sbjct: 796 TYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEA 855

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAV 384
             KGC     +  +L+++  K + +E A 
Sbjct: 856 RLKGCSIYTKTCVVLLDSLHKAECIEQAA 884



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 1/226 (0%)

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K +K+ +A    + M   + RP+   Y  L+  L    +    L L  +MQ      +  
Sbjct: 177 KSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVH 236

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
            F T I    + G V  A+ +   +++   E  +  YN  I+   K G++  A K FH +
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEM 296

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +  G + D VT ++MI  LCK  ++++A +L   M+    VP    + T++ G+    K 
Sbjct: 297 KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKF 356

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                LL +   +  + S +S +  ++  L +  +  E L +F  +
Sbjct: 357 EDAYSLLERQRRKGCIPSVVSYNC-ILSCLGRKGQVDEALKKFEEM 401


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/580 (26%), Positives = 282/580 (48%), Gaps = 77/580 (13%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           ++  L K K+ D   S+ +++  +G+ PDLF  +L+I+ LCK      A  VL +++ + 
Sbjct: 89  IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 148

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLN-------VFACD---------------- 183
             PN++T+N LI+G    G   E+ R+FK+++       V  C+                
Sbjct: 149 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 208

Query: 184 ------------PNVVTFNTLINGLCRTRNTLV--------------------------- 204
                       P++++++T+++G     ++ +                           
Sbjct: 209 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 268

Query: 205 ----------ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
                     A+ +FE+M N+ G I  PD VT+ ++I  LC+ G +D A      M D  
Sbjct: 269 AYARCGMMDKAMLIFEDMQNK-GMI--PDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 325

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT-FNAMINYNCKDGKMDKV 313
           + P+   Y  LI G C   +  +AK L  EMM+  + P  V  F+++IN  CK+G++ + 
Sbjct: 326 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 385

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             ++++M+Q G  P+ VT+NSLM+G+CLVG +  A  L  +M S G   + Y Y  L++ 
Sbjct: 386 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 445

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK+ +++DA+ ++R+ML + ++P+ + Y+ +L GLFQ      A K+  +M  +     
Sbjct: 446 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 505

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   + GLC+N    EA  + + +     +  I T+N +I+ + K+GR + A +LF 
Sbjct: 506 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 565

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +   G +P++ T S MI  L KE   ++A++L + +E             ++R  +   
Sbjct: 566 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 625

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           + +K    L  +    L + + S  S +  L S++ KYRE
Sbjct: 626 EVAKASNYLSIIGENNLTL-EASTISLLASLFSREGKYRE 664



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 264/550 (48%), Gaps = 42/550 (7%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+    K+ + D    LF  +   G+ P + + N +I  LCKM     A  ++ +++ S 
Sbjct: 54  LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 113

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+  T++ +I+GLC    + +A R+ +++      PN +T+N+LI+G   +     ++
Sbjct: 114 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 173

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           ++F++M +  G I  P V   NS I  L K G  ++AK +   M  +   P++I+Y++++
Sbjct: 174 RVFKQM-SSCGVI--PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 230

Query: 267 CGFCCVDD--WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
            G+    D    +   +F  M+  G+ P+   FN +IN   + G MDK   + E M  +G
Sbjct: 231 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 290

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG---------------CRH------- 362
           + PDTVT+ +++   C +GR+  A   F  MV  G               C H       
Sbjct: 291 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 350

Query: 363 --------------DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
                          V  ++ +IN  CK+ +V +   +   M+    RP+V+T+N+L+ G
Sbjct: 351 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 410

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
              VGN+ +A  L+D M    + P+ + + T +DG CKNG + +A+ VF+ + +   +  
Sbjct: 411 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 470

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
              Y+ +++GL +  R   A K+FH +   G    + T   ++  LC+    D+AN LL 
Sbjct: 471 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLE 530

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            + A N     +TF  ++    +  ++ +   L   ++   LV +  + S  + +L+ K+
Sbjct: 531 KLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI-KE 589

Query: 589 KKYRECLNQF 598
           + Y E  N F
Sbjct: 590 ESYEEADNLF 599



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 235/498 (47%), Gaps = 42/498 (8%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P +   N+LI+C  ++        ++GR+L++   P+  +++ LI G   +G + +A  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           F ++      P ++  N++I  LC+ +    A  + ++MV+   A   PD+ TY+ IIDG
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA---PDLFTYSLIIDG 127

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW------------------ 275
           LCK   +DKA+ +L QM +    PN ITYNSLI G+     W                  
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 187

Query: 276 -----------------KEAKCLFIEMMDNGVQPDVVTFNAMIN--YNCKDGKMDKVNRL 316
                             EAKC+F  M+  G +PD+++++ M++      D  +  V+ +
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 247

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
             LM+ +G+ P+   +N L++ +   G + +A  +F  M +KG   D  ++  +I++ C+
Sbjct: 248 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 307

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             +++DA+  +  M+   + PS   Y  L+ G    G L  A +LI +M   D+ P    
Sbjct: 308 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 367

Query: 437 -FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
            F++ I+ LCK G V E   +   +        + T+N L+ G C +G ++ A  L   +
Sbjct: 368 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 427

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G  P+     T++   CK G++D A  +  DM  K   P+ V +  +L G  Q  + 
Sbjct: 428 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 487

Query: 556 SKVVVLLHKMAAEKLVVS 573
           +    + H+M      VS
Sbjct: 488 TAAKKMFHEMIESGTTVS 505



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 233/480 (48%), Gaps = 6/480 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLT--MLAKNKQYDTVVSLFKRL 107
           F++   K G   +NEA   FD M+   P P + S++ +L     A +     V ++F  +
Sbjct: 194 FIHALFKHGR--TNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 251

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
            + G+ P+  V N+LIN   + G+   A ++   +      P+TVTF  +I+ LC  GR+
Sbjct: 252 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 311

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            +A   F  +      P+   +  LI G C     + A +L  EM+N+   I  P V  +
Sbjct: 312 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK--DIPPPGVKYF 369

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           +SII+ LCK+G V + K+++  M      PNV+T+NSL+ G+C V + +EA  L   M  
Sbjct: 370 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 429

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G++P+   +  +++  CK+G++D    +   M+ +GV P +V Y+ ++ G     R + 
Sbjct: 430 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 489

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A+++F  M+  G    +++Y +++   C++   ++A  L  ++ +  ++  +IT+N ++S
Sbjct: 490 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 549

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
            +F+VG   +A +L D +    +VP+  T++  I  L K     EA  +F ++       
Sbjct: 550 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 609

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
                N ++  L     +  A      +       +  T S +     +EG+  +   LL
Sbjct: 610 DSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 669



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 116/228 (50%), Gaps = 1/228 (0%)

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           R   P   TYN L+D +  V R      +   ++  G   D +SY+ LI    KD +V+ 
Sbjct: 8   RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 66

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A CL+ EM+ + + P ++  N+++  L ++  +  A  ++ KM  + + PD FT++  ID
Sbjct: 67  AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 126

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK+  + +A +V + +          TYN LI+G    G    + ++F ++   G IP
Sbjct: 127 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 186

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
            V  C++ IH L K G+ ++A  +   M  K   P  +++ T+L G+ 
Sbjct: 187 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYA 234



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 2/121 (1%)

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           I TYN LI+   ++ R      +  RL   G  PD  + S +I+   K+G++DKA+ L L
Sbjct: 14  IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFL 72

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           +M  +  +P  +   ++++   +  +  K   ++ KM  +  +  DL   S ++D L K 
Sbjct: 73  EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKM-VDSGIAPDLFTYSLIIDGLCKS 131

Query: 589 K 589
           K
Sbjct: 132 K 132


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 257/537 (47%), Gaps = 39/537 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F+ + K +  P   ++  ++       ++D   SL +R  + G  P +   N +
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + CL KMG    A  V   + +    PN  T+N LI+ LC  G++  A  L   +     
Sbjct: 350 LTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV T N +++ LC+++    A  +FEEM  +   +C PD +T+ S+IDGL K G VD 
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK---VCTPDEITFCSLIDGLGKVGRVDD 465

Query: 243 AKELLLQMKDRNINPNVITYNSLICGF--------------------CCVD--------- 273
           A ++  +M D +   N I Y SLI  F                    C  D         
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525

Query: 274 ------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                 + ++ + +F E+      PD  +++ +I+   K G  ++   L   M ++G   
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           DT  YN ++DGFC  G++++A +L   M +KG    V +Y  +I+   K  ++++A  L+
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            E  S+RI  +V+ Y++L+ G  +VG + +A  +++++    + P+ +T+ + +D L K 
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             + EA+  FQ+++  KC     TY  LINGLCK+ +   A   +  +Q +G  P  ++ 
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +TMI  L K G + +A  L    +A   VP    +  ++ G    N+      L  +
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 267/540 (49%), Gaps = 5/540 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S+  +  F  M ++   P +  FT L+   AK  + D+ +SL   + S+ L  D+ + N+
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            I+   K+G    A+     I  +   P+ VT+  +I  LC   R+ EA  +F+ L    
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P    +NT+I G         A  L E    + G+I  P V+ YN I+  L K G VD
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK-GSI--PSVIAYNCILTCLRKMGKVD 360

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A ++  +MK ++  PN+ TYN LI   C       A  L   M   G+ P+V T N M+
Sbjct: 361 EALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK  K+D+   + E M  +   PD +T+ SL+DG   VGR+  A +++  M+   CR
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +   Y  LI       + ED   +Y++M+++   P +   NT +  +F+ G       +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            ++++    VPD+ +++  I GL K GF  E  ++F +++   C L    YN +I+G CK
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G++  A +L   ++ KG  P VVT  ++I  L K  ++D+A  L  + ++K    + V 
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + +L+ GF +  +  +  ++L ++  +K +  +L   + ++D L K ++  E L  F+ +
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEEL-MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 233/504 (46%), Gaps = 68/504 (13%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F+ M K   +P ++++ IL+ ML +  + DT   L   +   GLFP++  +N++
Sbjct: 360 DEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418

Query: 123 INCLCK-----------------------------------MGITSGAFVVLGRILRSCF 147
           ++ LCK                                   +G    A+ V  ++L S  
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
             N++ +  LI      GR  +  +++K +    C P++   NT ++ + +         
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538

Query: 208 LFEEM------------------------VNEFGAI--------CKPDVVTYNSIIDGLC 235
           +FEE+                         NE   +        C  D   YN +IDG C
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G V+KA +LL +MK +   P V+TY S+I G   +D   EA  LF E     ++ +VV
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            ++++I+   K G++D+   +LE ++Q+G+ P+  T+NSL+D       I+ A   F SM
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
               C  +  +Y ILIN  CK +K   A   ++EM  + ++PS I+Y T++SGL + GN+
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A  L D+ + N  VPDS  +   I+GL      ++A  +F+  R     +  +T   L
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVL 838

Query: 476 INGLCKMGRLKTACKLFHRLQHKG 499
           ++ L K   L+ A  +   L+  G
Sbjct: 839 LDTLHKNDCLEQAAIVGAVLRETG 862



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 209/439 (47%), Gaps = 14/439 (3%)

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDV 224
           R +E  R +++       P   ++N+L+  + R RN     ++  EM V  FG    P V
Sbjct: 80  RAIEYFRWYERRTELPHCPE--SYNSLLLVMARCRNFDALDQILGEMSVAGFG----PSV 133

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
            T   ++ G  K   + +  +++  M+     P    Y +LI  F  V+       LF +
Sbjct: 134 NTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQ 193

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M + G +P V  F  +I    K+G++D    LL+ M    ++ D V YN  +D F  VG+
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A + F  + + G + D  +Y  +I   CK  ++++AV ++  +   R  P    YNT
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           ++ G    G   +A  L+++ +    +P    +   +  L K G V EA++VF+ ++   
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-D 372

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + TYN LI+ LC+ G+L TA +L   +Q  G  P+V T + M+  LCK  ++D+A 
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            +  +M+ K C P E+TFC+L+ G  +  +      +  KM       + +  +S + + 
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492

Query: 585 LSKDKK------YRECLNQ 597
            +  +K      Y++ +NQ
Sbjct: 493 FNHGRKEDGHKIYKDMINQ 511



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 209/441 (47%), Gaps = 4/441 (0%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +LG +  + F P+  T   ++ G     ++ E   + + +  F   P    + TLI    
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
              ++ + L LF++M  E G   +P V  + ++I G  K+G VD A  LL +MK  +++ 
Sbjct: 180 AVNHSDMMLTLFQQM-QELGY--EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA 236

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +++ YN  I  F  V     A   F E+  NG++PD VT+ +MI   CK  ++D+   + 
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E + +    P T  YN+++ G+   G+   A  L     +KG    V +YN ++    K 
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            KV++A+ ++ EM  +   P++ TYN L+  L + G L  A +L D MQ   + P+  T 
Sbjct: 357 GKVDEALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              +D LCK+  + EA  +F+ +    C     T+  LI+GL K+GR+  A K++ ++  
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
                + +  +++I      G+ +  + +  DM  +NC P      T +    +  +  K
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535

Query: 558 VVVLLHKMAAEKLVVSDLSLS 578
              +  ++ A + V    S S
Sbjct: 536 GRAMFEEIKARRFVPDARSYS 556


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 242/466 (51%), Gaps = 3/466 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+ +  + ++ D     F  +   G+ P +   N +++   K+     A+V+   + 
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R   +    TFN ++N LC EG++ +A      +      PNVV++NT+I+G     N  
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A ++ + M  +     +PD  TY S+I G+CK+G +++A  L  +M +  + PN +TYN
Sbjct: 302 GARRILDAMRVKG---IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI G+C   D + A     EM+  G+ P V T+N +++    +G+M + + +++ M ++
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD +TYN L++G+   G   +A +L   M+SKG      +Y  LI    +  ++++A
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+ ++L + + P VI +N ++ G    GN+  A  L+ +M    V PD  TF T + G
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C+ G V EA  +   ++    +    +YN LI+G  + G +K A ++   +   G  P 
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 598

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++T + +I  LCK  + D A +LL +M  K   P + T+ +L+ G 
Sbjct: 599 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 225/449 (50%), Gaps = 6/449 (1%)

Query: 69  FDCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           F C   MK     P + +   +L++  K  + +    L+  +    +   ++  N+++N 
Sbjct: 199 FKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNV 258

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           LCK G    A   +G +    F PN V++N +I+G  + G I  A R+   + V   +P+
Sbjct: 259 LCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPD 318

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
             T+ +LI+G+C+      A  LF++MV E G +  P+ VTYN++IDG C  G +++A  
Sbjct: 319 SYTYGSLISGMCKEGRLEEASGLFDKMV-EIGLV--PNAVTYNTLIDGYCNKGDLERAFS 375

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
              +M  + I P+V TYN L+          EA  +  EM   G+ PD +T+N +IN   
Sbjct: 376 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 435

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           + G   K   L   M+ +G+ P  VTY SL+       R+  A +LF  ++ +G   DV 
Sbjct: 436 RCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 495

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            +N +++ +C +  VE A  L +EM  + + P  +T+NTL+ G  + G + +A  L+D+M
Sbjct: 496 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 555

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +   + PD  ++ T I G  + G + +A +V   + +      + TYN LI  LCK    
Sbjct: 556 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 615

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
             A +L   + +KG  PD  T  ++I  +
Sbjct: 616 DLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 215/400 (53%), Gaps = 3/400 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +++ F+ L+   C   R  EA + F  +      P + T N +++   +     +A  L+
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            EM   F       V T+N +++ LCK+G + KA+E +  M+     PNV++YN++I G+
Sbjct: 238 AEM---FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 294

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
               + + A+ +   M   G++PD  T+ ++I+  CK+G++++ + L + M++ G+ P+ 
Sbjct: 295 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 354

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTYN+L+DG+C  G + RA      MV KG    V +YN+L++A   + ++ +A  + +E
Sbjct: 355 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 414

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M  + I P  ITYN L++G  + GN   A  L ++M    + P   T+ + I  L +   
Sbjct: 415 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 474

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + EA  +F+ I +      +  +N +++G C  G ++ A  L   +  K   PD VT +T
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++   C+EG++++A  LL +M+ +   P  +++ TL+ G+
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 574



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 230/477 (48%), Gaps = 8/477 (1%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            V +LL+   C++     AF     +      P   T N +++      R+  A  L+ +
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +        V TFN ++N LC+    L   + F   +   G   KP+VV+YN+II G   
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCK-EGKLKKAREFIGFMEGLG--FKPNVVSYNTIIHGYSS 296

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G ++ A+ +L  M+ + I P+  TY SLI G C     +EA  LF +M++ G+ P+ VT
Sbjct: 297 RGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 356

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I+  C  G +++     + M+++G+ P   TYN L+    + GR+  A ++   M 
Sbjct: 357 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 416

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KG   D  +YNILIN   +    + A  L+ EMLS+ I P+ +TY +L+  L +   + 
Sbjct: 417 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 476

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A  L +K+    V PD   F   +DG C NG V  A  + + +          T+N L+
Sbjct: 477 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 536

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            G C+ G+++ A  L   ++ +G  PD ++ +T+I    + G +  A  +  +M +    
Sbjct: 537 QGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFN 596

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV-----VDLLSKD 588
           P+ +T+  L++   +N +      LL +M  + +   D +  S +     VD L +D
Sbjct: 597 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVED 653



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 186/358 (51%), Gaps = 5/358 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GNI    A    D M      P   ++  L++ + K  + +    LF ++   GL P+  
Sbjct: 298 GNIEG--ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 355

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N LI+  C  G    AF     +++    P+  T+N L++ L  EGR+ EA  + K++
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P+ +T+N LING  R  N   A  L  EM+++     +P  VTY S+I  L + 
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG---IEPTHVTYTSLIYVLSRR 472

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             + +A +L  ++ D+ ++P+VI +N+++ G C   + + A  L  EM    V PD VTF
Sbjct: 473 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 532

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N ++   C++GK+++   LL+ M +RG+ PD ++YN+L+ G+   G I  A  +   M+S
Sbjct: 533 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 592

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            G    + +YN LI   CK+Q+ + A  L +EM+++ I P   TY +L+ G+  V  L
Sbjct: 593 IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 650



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 188/394 (47%), Gaps = 35/394 (8%)

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +LF+E+      +     + ++ ++   C+    D+A +    MK++ I P + T N ++
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 221

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK-------------- 312
             F  ++  + A  L+ EM    +   V TFN M+N  CK+GK+ K              
Sbjct: 222 SLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 281

Query: 313 ---------------------VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
                                  R+L+ M  +G+ PD+ TY SL+ G C  GR+  A  L
Sbjct: 282 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 341

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  MV  G   +  +YN LI+  C    +E A     EM+ + I PSV TYN L+  LF 
Sbjct: 342 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 401

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G +G+A  +I +M+   ++PD+ T+   I+G  + G   +A  +   + +   E    T
Sbjct: 402 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 461

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y  LI  L +  R+K A  LF ++  +G  PDV+  + M+   C  G +++A  LL +M+
Sbjct: 462 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 521

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            K+  P EVTF TL++G  +  K  +  +LL +M
Sbjct: 522 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 555



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 163/308 (52%), Gaps = 1/308 (0%)

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           + F+ ++   C+  + D+  +   +M ++G+ P   T N ++  F  + R+  A  L+  
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M        VY++NI++N  CK+ K++ A      M     +P+V++YNT++ G    GN
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A +++D M++  + PDS+T+ + I G+CK G + EA  +F  +          TYN 
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI+G C  G L+ A      +  KG +P V T + ++H L  EG+M +A+D++ +M  K 
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            +P  +T+  L+ G+ +     K   L ++M ++ +  + ++ +S ++ +LS+  + +E 
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS-LIYVLSRRNRMKEA 478

Query: 595 LNQFRHLL 602
            + F  +L
Sbjct: 479 DDLFEKIL 486


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 264/524 (50%), Gaps = 6/524 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P   +F I   +L +         L  +L S GL   +   N  ++ +     + G  +
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANN--SEGIEM 244

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            +        + NT ++N +I  LC  G++ EA RL  +++  +  P+VV+++T+I+G C
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                  ALKL ++M  +   + KP+  TYNSII  LCK G   +A+++L +M  + I P
Sbjct: 305 HLGELKKALKLMDDM--QIKGL-KPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + + Y +LI GF  +   + A   F EM+   + PD +T+  +I    + GK+ +   L 
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             MI RG+ PD VTY +L+D +C  G +  A  L   MV  G   ++ +Y  LI+  CK 
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +++ A  L  EM  + ++ +V  YN++++G+ + GN+  A+KL+ +M++  + PD+ T+
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T ID  C+ G + +A ++ Q + +   +  + T+N L+NG C +G L+   +L   +  
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           KG +PD +T +T++   C    M+    +   M  +   P   T+  L++G  +  +  K
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK-ARNLK 660

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
               L+K   EK  V  ++  + ++    K KK  E    F  +
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEM 704



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 241/477 (50%), Gaps = 4/477 (0%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N++I  LC++G    A  +L ++     TP+ V+++ +I+G C  G + +A +L   + +
Sbjct: 262 NIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQI 321

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               PN  T+N++I  LC+   +  A K+  EM+++      PD V Y ++I G  K G 
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ---KIIPDNVVYTTLIHGFFKLGH 378

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           V  A +   +M  + I+P+ ITY +LI GF       E + LF EM+  G++PD VT+  
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  CK G+M     L   M+Q G+ P+ VTY +L+DG C  G +  A EL   M  KG
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + +V  YN ++N  CK   +E A+ L +EM    I P  ITY T++    ++G++  A 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           KL+ +M    + P   TF   ++G C  G + +  ++   +          TYN L+   
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C    + T  K++ R++++G  PD  T + +I   CK   + +A  L  +M  K  VP+ 
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
            ++  L++ F +  K  +   L  +M    L V+D  + +  VD+  ++      LN
Sbjct: 679 TSYNALIKRFYKKKKILEARELFEEMRGHGL-VADGEIYNFFVDMCYEEGDVEITLN 734



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 235/459 (51%), Gaps = 3/459 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           S   TS+ I++  L +  +      L  +++     PD+   + +I+  C +G    A  
Sbjct: 255 SWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALK 314

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           ++  +      PN  T+N +I  LC  G+  EA ++ +++      P+ V + TLI+G  
Sbjct: 315 LMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFF 374

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  +   A K F+EM+++      PD +TY ++I G  + G V + + L  +M  R + P
Sbjct: 375 KLGHVRTANKWFDEMLSK---KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP 431

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + +TY +LI  +C   +   A  L  EM+  G+ P++VT+ A+I+  CK G++D  N LL
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M ++G+  +   YNS+++G C  G I +A +L   M   G   D  +Y  +I+A C+ 
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             ++ A  L +EML   ++P+V+T+N L++G   +G L D  +L+  M    +VPD+ T+
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T +   C    +    ++++ +RN        TYN LI G CK   LK A  L+  +  
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           KG +P V + + +I    K+ ++ +A +L  +M     V
Sbjct: 672 KGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLV 710



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 186/357 (52%), Gaps = 3/357 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           +FD M+  K SP   ++T L+    +  +     +LF  + S GL PD      LI+  C
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    AF +   +++   TPN VT+  LI+GLC  G +  A  L  ++       NV 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            +N+++NG+C+  N   A+KL +EM  E   I  PD +TY ++ID  C+ G +DKA +LL
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEM--EVAGI-DPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M DR + P V+T+N L+ GFC +   ++   L   M++ G+ PD +T+N ++  +C  
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             M+   ++ + M  +GV PD+ TYN L+ G C    +  A  L+  M+ KG    V SY
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSY 681

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           N LI    K +K+ +A  L+ EM    +      YN  +   ++ G++   L L D+
Sbjct: 682 NALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 213/426 (50%), Gaps = 3/426 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + S++ ++       +    + L   +   GL P+ +  N +I  LCK+G +  A  
Sbjct: 290 TPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEK 349

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VL  ++     P+ V +  LI+G    G +  A + F ++      P+ +T+ TLI G  
Sbjct: 350 VLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFG 409

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +    +    LF EM++      KPD VTY ++ID  CK G +  A  L  +M    + P
Sbjct: 410 QGGKVIEPQNLFHEMISRG---LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N++TY +LI G C   +   A  L  EM   G+Q +V  +N+M+N  CK G +++  +L+
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M   G++PD +TY +++D +C +G I +A +L   M+ +G +  V ++N+L+N  C  
Sbjct: 527 KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             +ED   L   ML + I P  ITYNTL+       ++    K+  +M+   V PDS T+
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I G CK   + EA  +++ +        + +YN LI    K  ++  A +LF  ++ 
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRG 706

Query: 498 KGPIPD 503
            G + D
Sbjct: 707 HGLVAD 712



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 205/389 (52%), Gaps = 3/389 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S EA      M+  K  P    +T L+    K     T    F  + S  + PD      
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTT 403

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI    + G       +   ++     P+ VT+  LI+  C  G ++ A  L  ++    
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN+VT+  LI+GLC+      A +L +EM  +     + +V  YNS+++G+CK G ++
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG---LQLNVCIYNSMVNGICKAGNIE 520

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A +L+ +M+   I+P+ ITY ++I  +C + D  +A  L  EM+D G+QP VVTFN ++
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N  C  G ++  +RLL  M+++G+ PD +TYN+LM   C+   ++   +++  M ++G  
Sbjct: 581 NGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YNILI  +CK + +++A  LY+EM+ +   P+V +YN L+   ++   + +A +L
Sbjct: 641 PDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAREL 700

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
            ++M+ + +V D   +  ++D   + G V
Sbjct: 701 FEEMRGHGLVADGEIYNFFVDMCYEEGDV 729


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 279/558 (50%), Gaps = 41/558 (7%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            EA   F+ + +   +P   ++ +++   +K  Q D  V+L   +  NG  PD+ V+N LI
Sbjct: 490  EAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI 549

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
            + L K G    A+ +  R+     +P  VT+N L++GL  EGR+ +A  LF+ +    C 
Sbjct: 550  DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCS 609

Query: 184  PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            PN ++FNTL++  C+     +ALK+F +M       CKPDV+TYN++I GL K+  V+ A
Sbjct: 610  PNTISFNTLLDCFCKNDEVELALKMFSKMTV---MDCKPDVLTYNTVIYGLIKENKVNHA 666

Query: 244  KELLLQMKDRNINPNVIT------------------------------------YNSLIC 267
                 Q+K ++++P+ +T                                    +  L+ 
Sbjct: 667  FWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMG 725

Query: 268  GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR-GVN 326
            G     +  +A     E++ NG+  +      ++   CK  +     ++ +   ++ G++
Sbjct: 726  GTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGIS 785

Query: 327  PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            P   +YN L+     V    +A +LF  M + GC  D +++N+L+  + K  K+ +   L
Sbjct: 786  PTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFEL 845

Query: 387  YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            Y+EM+S R +P  ITYN ++S L +  NL  AL     +  +D  P   T+   IDGL K
Sbjct: 846  YKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAK 905

Query: 447  NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
             G + EA+++F+ + +  C+     +N LING  K+G  +TAC+LF R+ ++G  PD+ +
Sbjct: 906  VGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS 965

Query: 507  CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
             + ++  LC  G++D+A     ++++    P  + +  ++ G  ++ +  + + L ++M 
Sbjct: 966  YTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025

Query: 567  AEKLVVSDLSLSSKVVDL 584
               +V    + +S +++L
Sbjct: 1026 NRGIVPDLYTYNSLMLNL 1043



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 248/490 (50%), Gaps = 6/490 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+  +  M+     P + +++ L+  L K +  + V+ L K +   GL P+++   + 
Sbjct: 209 GEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTIC 268

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  L + G    A+ +  R+      P+ VT+  LI+ LC  G++  A  LF K+     
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK-PDVVTYNSIIDGLCKDGFVD 241
            P+ V + TL++      N    L  F+E  ++  A    PDVVT+  ++D LCK    D
Sbjct: 329 KPDQVIYITLLDKF----NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFD 384

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A      M+ + I PN+ TYN+LICG       ++A  L   M   GVQP   T+   I
Sbjct: 385 EAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFI 444

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +Y  K G+  K     E M  +G+ P+ V  N+ +     +GR+  A+ +F  +   G  
Sbjct: 445 DYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLA 504

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +YN+++    K  +V++AV L  EM+     P VI  N+L+  L++ G + +A ++
Sbjct: 505 PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQM 564

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            D+M+   + P   T+ T + GL K G V +A+++F+++   KC     ++N L++  CK
Sbjct: 565 FDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCK 624

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              ++ A K+F ++      PDV+T +T+I+ L KE +++ A      ++ K+  P  VT
Sbjct: 625 NDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVT 683

Query: 542 FCTLLRGFVQ 551
            CTLL G V+
Sbjct: 684 ICTLLPGLVK 693



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 251/521 (48%), Gaps = 3/521 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F+ M K      + ++  +   L+       + ++  ++   G   + +  N LI+ L +
Sbjct: 145 FEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQ 204

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A  V  R++     P+  T++ L+  L  +        L K++      PNV T
Sbjct: 205 SGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYT 264

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           F   I  L R      A ++F  M +E    C PD+VTY  +ID LC  G ++ AKEL +
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEG---CGPDLVTYTVLIDALCNAGQLENAKELFV 321

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK     P+ + Y +L+  F    D    K  + +M  +G  PDVVTF  +++  CK  
Sbjct: 322 KMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKAR 381

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
             D+     ++M ++G+ P+  TYN+L+ G    GRI  A +L  +M S G +   Y+Y 
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYI 441

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
             I+   K  +   AV  + +M ++ I P+++  N  L  L ++G L +A  + + ++ N
Sbjct: 442 TFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            + PDS T+   +    K G V EAV +   +    CE  +   N LI+ L K GR+  A
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            ++F R++     P VVT +T++  L KEG++ KA +L   M  K C P+ ++F TLL  
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDC 621

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           F +N++    + +  KM         L+ ++ +  L+ ++K
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 240/483 (49%), Gaps = 3/483 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+  L+ +L ++      + +++R+ S GL P L   + L+  L K   +    V+L  +
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 PN  TF   I  L   G+I EA  +F++++   C P++VT+  LI+ LC     
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A +LF +M        KPD V Y +++D     G +D  KE   QM+     P+V+T+
Sbjct: 314 ENAKELFVKMKANGH---KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             L+   C   D+ EA   F  M   G+ P++ T+N +I    + G+++   +LL+ M  
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMES 430

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            GV P   TY + +D F   G   +A E F  M +KG   ++ + N  + +  +  ++ +
Sbjct: 431 VGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  ++  +    + P  +TYN ++    +VG + +A+ L+ +M  N   PD     + ID
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
            L K G V EA Q+F  +++ K    + TYN L++GL K GR++ A +LF  +  K   P
Sbjct: 551 SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSP 610

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           + ++ +T++   CK  +++ A  +   M   +C P  +T+ T++ G ++ NK +      
Sbjct: 611 NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF 670

Query: 563 HKM 565
           H++
Sbjct: 671 HQL 673



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 157/621 (25%), Positives = 279/621 (44%), Gaps = 94/621 (15%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN----- 110
           ++G I  +EA   F  M      P + ++T+L+  L    Q +    LF ++ +N     
Sbjct: 274 RAGKI--DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPD 331

Query: 111 ------------------------------GLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
                                         G  PD+    +L++ LCK      AF    
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFD 391

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            + +    PN  T+N LI GL   GRI +A +L   +      P   T+ T I+   ++ 
Sbjct: 392 VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSG 451

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            T  A++ FE+M  + G +  P++V  N+ +  L + G + +AK +   +++  + P+ +
Sbjct: 452 ETGKAVETFEKMKAK-GIV--PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TYN ++  +  V    EA  L  EM+ NG +PDV+  N++I+   K G++D+  ++ + M
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
               ++P  VTYN+L+ G    GR+ +A ELF SM+ K C  +  S+N L++  CK+ +V
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           E A+ ++ +M     +P V+TYNT++ GL +   +  A     +++   + PD  T  T 
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTL 687

Query: 441 IDGLCKNGFVLEAVQV---------FQAIRNCKCELR-------------IETYNCLING 478
           + GL K G + +A+ +         F+  R+   +L              I     ++NG
Sbjct: 688 LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747

Query: 479 L--------------CKMGRLKTACKLFHRLQHK-GPIPDVVTCSTMIHWLCKEGQMDKA 523
           +              CK  R   A ++F +   K G  P + + + +I  L +    +KA
Sbjct: 748 ICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKA 807

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK---------LVVSD 574
            DL  DM+   C P   TF  LL    ++ K +++  L  +M + +         +V+S 
Sbjct: 808 WDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISS 867

Query: 575 LSLSSKV-------VDLLSKD 588
           L+ S+ +        DL+S D
Sbjct: 868 LAKSNNLDKALDFFYDLVSSD 888



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 256/541 (47%), Gaps = 37/541 (6%)

Query: 43   DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
            D   +   ++  +K+G +  +EA   FD M  MK SP + ++  LL+ L K  +    + 
Sbjct: 541  DVIVVNSLIDSLYKAGRV--DEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIE 598

Query: 103  LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            LF+ +      P+    N L++C CK      A  +  ++      P+ +T+N +I GL 
Sbjct: 599  LFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658

Query: 163  AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF------ 216
             E ++  A   F +L   +  P+ VT  TL+ GL +      A+ +  + + +       
Sbjct: 659  KENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNR 717

Query: 217  --------GAICKPD-----VVTYNSIIDGLCK-DGFV---------DKAKELLLQMKDR 253
                    G + + +     +     +++G+C+ D F+          K +    Q+ D+
Sbjct: 718  SFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDK 777

Query: 254  -----NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
                  I+P + +YN LI     V   ++A  LF +M + G  PD  TFN ++  + K G
Sbjct: 778  FTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSG 837

Query: 309  KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            K+ ++  L + MI R   PD +TYN ++        + +A + F  +VS   R    +Y 
Sbjct: 838  KITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYG 897

Query: 369  ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
             LI+   K  ++E+A+ L+ EM     +P+   +N L++G  ++G+   A +L  +M   
Sbjct: 898  PLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE 957

Query: 429  DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
             + PD  ++   +D LC  G V EA+  F  +++   +     YN +INGL K  R++ A
Sbjct: 958  GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017

Query: 489  CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
              L++ ++++G +PD+ T ++++  L   G +++A  +  +++     P   T+  L+RG
Sbjct: 1018 LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077

Query: 549  F 549
            +
Sbjct: 1078 Y 1078



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/545 (24%), Positives = 248/545 (45%), Gaps = 15/545 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD M K    P + ++  L+  L +  + +  + L   + S G+ P  +     
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITF 443

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K G T  A     ++      PN V  N  +  L   GR+ EA  +F  L     
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ VT+N ++    +      A+ L  EM+      C+PDV+  NS+ID L K G VD+
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG---CEPDVIVVNSLIDSLYKAGRVDE 560

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++  +MKD  ++P V+TYN+L+ G       ++A  LF  M+     P+ ++FN +++
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLD 620

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+ +++   ++   M      PD +TYN+++ G     +++ A   F   + K    
Sbjct: 621 CFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF-WFFHQLKKSMHP 679

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKL 421
           D  +   L+    K  ++ DA+ + R+ + + R R +   +  L+ G      +  A+  
Sbjct: 680 DHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIF 739

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNCLINGLC 480
            +++ LN +  +       +  LCK+   L A Q+F    +       + +YNCLI  L 
Sbjct: 740 AEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELL 799

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           ++   + A  LF  +++ G  PD  T + ++    K G++ +  +L  +M ++ C P  +
Sbjct: 800 EVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAI 859

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK----VVDLLSKDKKYRECLN 596
           T+  ++    ++N   K +   +      LV SD   + +    ++D L+K  +  E + 
Sbjct: 860 TYNIVISSLAKSNNLDKALDFFY-----DLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMR 914

Query: 597 QFRHL 601
            F  +
Sbjct: 915 LFEEM 919



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 182/383 (47%), Gaps = 4/383 (1%)

Query: 96   QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC-FTPNTVTF 154
            + D  +   + L  NG+  +   L  L+  LCK      A+ +  +  +    +P   ++
Sbjct: 732  EMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASY 791

Query: 155  NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
            N LI  L       +A  LFK +    C P+  TFN L+    ++       +L++EM++
Sbjct: 792  NCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS 851

Query: 215  EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                 CKPD +TYN +I  L K   +DKA +    +   +  P   TY  LI G   V  
Sbjct: 852  RR---CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 275  WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
             +EA  LF EM D G +P+   FN +IN   K G  +   +L + M+  G+ PD  +Y  
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 335  LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
            L+D  CL GR+  A   F  + S G   D  +YN +IN   K Q++E+A+ LY EM +  
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 395  IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
            I P + TYN+L+  L   G +  A ++ +++QL  + PD FT+   I G   +     A 
Sbjct: 1029 IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAY 1088

Query: 455  QVFQAIRNCKCELRIETYNCLIN 477
             V++ +    C   I TY  L N
Sbjct: 1089 TVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 212/457 (46%), Gaps = 20/457 (4%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK------RLNSNGLFPDL 116
            N A +FF   +K    P   +   LL  L K  Q    +S+ +      R   N  F + 
Sbjct: 664  NHAFWFFH-QLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWED 722

Query: 117  FVLNLLINCLCKMGITSGAFVVLGRILR--SCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
             +   L+       I     +VL  I R  S   P       L+  LC   R + A ++F
Sbjct: 723  LMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP-------LVRVLCKHKRELYAYQIF 775

Query: 175  KKLNV-FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             K        P + ++N LI  L     T  A  LF++M N     C PD  T+N ++  
Sbjct: 776  DKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN---VGCAPDAFTFNMLLAV 832

Query: 234  LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
              K G + +  EL  +M  R   P+ ITYN +I      ++  +A   F +++ +  +P 
Sbjct: 833  HGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPT 892

Query: 294  VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
              T+  +I+   K G++++  RL E M   G  P+   +N L++G+  +G    A +LF 
Sbjct: 893  PRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFK 952

Query: 354  SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
             MV++G R D+ SY IL++  C   +V++A+  + E+ S  + P  I YN +++GL +  
Sbjct: 953  RMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQ 1012

Query: 414  NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
             + +AL L ++M+   +VPD +T+ + +  L   G V +A ++++ ++    E  + TYN
Sbjct: 1013 RMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYN 1072

Query: 474  CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             LI G       + A  ++  +   G  P++ T + +
Sbjct: 1073 ALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 125/251 (49%)

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T N M+ +     K++ +  + E M ++ +  D  TY ++     + G + +   +   M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              G   + YSYN LI+   +     +A+ +YR M+SE ++PS+ TY+ L+  L +  + 
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
              + L+ +M+   + P+ +TF   I  L + G + EA ++F+ + +  C   + TY  L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+ LC  G+L+ A +LF +++  G  PD V   T++      G +D   +    MEA   
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 536 VPSEVTFCTLL 546
           +P  VTF  L+
Sbjct: 364 MPDVVTFTILV 374



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 136/295 (46%)

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           D  ++   +F  M    ++ D+ T+  +       G + ++  +L  M + G   +  +Y
Sbjct: 136 DKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSY 195

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N L+      G    A E++  MVS+G +  + +Y+ L+ A  K +  E  + L +EM  
Sbjct: 196 NGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMED 255

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             +RP+V T+   +  L + G + +A ++  +M      PD  T+   ID LC  G +  
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A ++F  ++    +     Y  L++     G L T  + + +++  G +PDVVT + ++ 
Sbjct: 316 AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            LCK    D+A      M  +  +P+  T+ TL+ G ++  +    + LL  M +
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMES 430



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 113/255 (44%), Gaps = 36/255 (14%)

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           KVED   ++  M  + IR  + TY T+   L   G L     +++KM+    V +++++ 
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK----------------- 481
             I  L ++GF  EA++V++ + +   +  ++TY+ L+  L K                 
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 482 ------------------MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                              G++  A ++F R+  +G  PD+VT + +I  LC  GQ++ A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            +L + M+A    P +V + TLL  F              +M A+   + D+   + +VD
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG-YMPDVVTFTILVD 375

Query: 584 LLSKDKKYRECLNQF 598
           +L K + + E    F
Sbjct: 376 VLCKARDFDEAFATF 390



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 65/132 (49%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +EA+Y+F+ +      P   ++  ++  L K+++ +  ++L+  + + G+ PDL+  N L
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            +  L   G+   A  +   +  +   P+  T+N LI G         A  ++K + V  C
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGC 1099

Query: 183  DPNVVTFNTLIN 194
            +PN+ T+  L N
Sbjct: 1100 NPNIGTYAQLPN 1111


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 242/466 (51%), Gaps = 3/466 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+ +  + ++ D     F  +   G+ P +   N +++   K+     A+V+   + 
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R   +    TFN ++N LC EG++ +A      +      PNVV++NT+I+G     N  
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A ++ + M  +     +PD  TY S+I G+CK+G +++A  L  +M +  + PN +TYN
Sbjct: 280 GARRILDAMRVKG---IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI G+C   D + A     EM+  G+ P V T+N +++    +G+M + + +++ M ++
Sbjct: 337 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 396

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD +TYN L++G+   G   +A +L   M+SKG      +Y  LI    +  ++++A
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+ ++L + + P VI +N ++ G    GN+  A  L+ +M    V PD  TF T + G
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 516

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C+ G V EA  +   ++    +    +YN LI+G  + G +K A ++   +   G  P 
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 576

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++T + +I  LCK  + D A +LL +M  K   P + T+ +L+ G 
Sbjct: 577 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 225/449 (50%), Gaps = 6/449 (1%)

Query: 69  FDCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           F C   MK     P + +   +L++  K  + +    L+  +    +   ++  N+++N 
Sbjct: 177 FKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNV 236

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           LCK G    A   +G +    F PN V++N +I+G  + G I  A R+   + V   +P+
Sbjct: 237 LCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPD 296

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
             T+ +LI+G+C+      A  LF++MV E G +  P+ VTYN++IDG C  G +++A  
Sbjct: 297 SYTYGSLISGMCKEGRLEEASGLFDKMV-EIGLV--PNAVTYNTLIDGYCNKGDLERAFS 353

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
              +M  + I P+V TYN L+          EA  +  EM   G+ PD +T+N +IN   
Sbjct: 354 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 413

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           + G   K   L   M+ +G+ P  VTY SL+       R+  A +LF  ++ +G   DV 
Sbjct: 414 RCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 473

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            +N +++ +C +  VE A  L +EM  + + P  +T+NTL+ G  + G + +A  L+D+M
Sbjct: 474 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 533

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +   + PD  ++ T I G  + G + +A +V   + +      + TYN LI  LCK    
Sbjct: 534 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 593

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
             A +L   + +KG  PD  T  ++I  +
Sbjct: 594 DLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 215/400 (53%), Gaps = 3/400 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +++ F+ L+   C   R  EA + F  +      P + T N +++   +     +A  L+
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            EM   F       V T+N +++ LCK+G + KA+E +  M+     PNV++YN++I G+
Sbjct: 216 AEM---FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 272

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
               + + A+ +   M   G++PD  T+ ++I+  CK+G++++ + L + M++ G+ P+ 
Sbjct: 273 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 332

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTYN+L+DG+C  G + RA      MV KG    V +YN+L++A   + ++ +A  + +E
Sbjct: 333 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 392

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M  + I P  ITYN L++G  + GN   A  L ++M    + P   T+ + I  L +   
Sbjct: 393 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 452

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + EA  +F+ I +      +  +N +++G C  G ++ A  L   +  K   PD VT +T
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 512

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++   C+EG++++A  LL +M+ +   P  +++ TL+ G+
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 552



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 230/477 (48%), Gaps = 8/477 (1%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            V +LL+   C++     AF     +      P   T N +++      R+  A  L+ +
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +        V TFN ++N LC+    L   + F   +   G   KP+VV+YN+II G   
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCK-EGKLKKAREFIGFMEGLG--FKPNVVSYNTIIHGYSS 274

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G ++ A+ +L  M+ + I P+  TY SLI G C     +EA  LF +M++ G+ P+ VT
Sbjct: 275 RGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 334

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I+  C  G +++     + M+++G+ P   TYN L+    + GR+  A ++   M 
Sbjct: 335 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 394

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KG   D  +YNILIN   +    + A  L+ EMLS+ I P+ +TY +L+  L +   + 
Sbjct: 395 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 454

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A  L +K+    V PD   F   +DG C NG V  A  + + +          T+N L+
Sbjct: 455 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 514

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            G C+ G+++ A  L   ++ +G  PD ++ +T+I    + G +  A  +  +M +    
Sbjct: 515 QGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFN 574

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV-----VDLLSKD 588
           P+ +T+  L++   +N +      LL +M  + +   D +  S +     VD L +D
Sbjct: 575 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVED 631



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 186/358 (51%), Gaps = 5/358 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GNI    A    D M      P   ++  L++ + K  + +    LF ++   GL P+  
Sbjct: 276 GNIEG--ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 333

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N LI+  C  G    AF     +++    P+  T+N L++ L  EGR+ EA  + K++
Sbjct: 334 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 393

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P+ +T+N LING  R  N   A  L  EM+++     +P  VTY S+I  L + 
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG---IEPTHVTYTSLIYVLSRR 450

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             + +A +L  ++ D+ ++P+VI +N+++ G C   + + A  L  EM    V PD VTF
Sbjct: 451 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 510

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N ++   C++GK+++   LL+ M +RG+ PD ++YN+L+ G+   G I  A  +   M+S
Sbjct: 511 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 570

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            G    + +YN LI   CK+Q+ + A  L +EM+++ I P   TY +L+ G+  V  L
Sbjct: 571 IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 628



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 188/394 (47%), Gaps = 35/394 (8%)

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +LF+E+      +     + ++ ++   C+    D+A +    MK++ I P + T N ++
Sbjct: 140 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 199

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK-------------- 312
             F  ++  + A  L+ EM    +   V TFN M+N  CK+GK+ K              
Sbjct: 200 SLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 259

Query: 313 ---------------------VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
                                  R+L+ M  +G+ PD+ TY SL+ G C  GR+  A  L
Sbjct: 260 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 319

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  MV  G   +  +YN LI+  C    +E A     EM+ + I PSV TYN L+  LF 
Sbjct: 320 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 379

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G +G+A  +I +M+   ++PD+ T+   I+G  + G   +A  +   + +   E    T
Sbjct: 380 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 439

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y  LI  L +  R+K A  LF ++  +G  PDV+  + M+   C  G +++A  LL +M+
Sbjct: 440 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 499

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            K+  P EVTF TL++G  +  K  +  +LL +M
Sbjct: 500 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 533



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 163/308 (52%), Gaps = 1/308 (0%)

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           + F+ ++   C+  + D+  +   +M ++G+ P   T N ++  F  + R+  A  L+  
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M        VY++NI++N  CK+ K++ A      M     +P+V++YNT++ G    GN
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A +++D M++  + PDS+T+ + I G+CK G + EA  +F  +          TYN 
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI+G C  G L+ A      +  KG +P V T + ++H L  EG+M +A+D++ +M  K 
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            +P  +T+  L+ G+ +     K   L ++M ++ +  + ++ +S ++ +LS+  + +E 
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS-LIYVLSRRNRMKEA 456

Query: 595 LNQFRHLL 602
            + F  +L
Sbjct: 457 DDLFEKIL 464


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 256/523 (48%), Gaps = 34/523 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + AV  FD + + + +P   +++ L+  LAK  + D  + L   +  + + PD+   N L
Sbjct: 175 DRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNAL 234

Query: 123 INCLCKMGITSGAFVVLGRILRSCFT-PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +    K G       V  ++++     PN  T+N +++GLC  GR  E   +++++    
Sbjct: 235 LGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN 294

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------FGAICKPDVV---- 225
             P+V+T+  LI+GLCR+ +   A +++ E++                  C+   V    
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAW 354

Query: 226 ---------------TYNSIIDGLCKDGFVDKAKELL-LQMKDRNINPNVITYNSLICGF 269
                          TYN +I GL   G VD+A EL  L  KD    P+ +T+ +LI G 
Sbjct: 355 KFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGL 414

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C      +A  +F E   +G Q DV ++++MIN  C  G++    ++ E M + G  P++
Sbjct: 415 CQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNS 474

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
             YN+L+ GFC V R S A  ++  M   GC   V +YN LI+  CK +K ++A  + RE
Sbjct: 475 HIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVARE 534

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M+     P + TY +L+ GLF    + DAL +  ++    +  D       I GLC  G 
Sbjct: 535 MVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGK 594

Query: 450 VLEAVQVFQAIRNCK-CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
           V EA+ VF  ++  K C   + TYN L++GL + G +  A  L+  +   G  PD+++ +
Sbjct: 595 VDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYN 654

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           T I  LC   ++ +   LL ++ ++  +P+ +T+  L+R  ++
Sbjct: 655 TRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/552 (28%), Positives = 269/552 (48%), Gaps = 44/552 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF-----PDLFVLNLLINCLCKMGITS 133
           PG+ S   LL    + +++    + F  L S+G F     P+L   N+++  LC  G   
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASL-SHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            A  +   + R    P+ +T++ L+ GL  + R+  A  L  ++      P+VV +N L+
Sbjct: 176 RAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALL 235

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
            G  +       +++++++V + GA  +P++ TYN ++DGLCK G   +  E+  +M   
Sbjct: 236 GGCFKAGEFEKVMRVWDKLVKDPGA--RPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK- 312
           N+ P+VITY  LI G C   D   A  ++ E++  G+  D   +N+++   C+ G++ + 
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353

Query: 313 ------------------------------VNRLLEL--MIQRGVN--PDTVTYNSLMDG 338
                                         V+  +EL  ++++ V   PDTVT+ +L+ G
Sbjct: 354 WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHG 413

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C  G  ++A  +F      G + DV+SY+ +IN  C   ++ DAV +Y +M  +  +P+
Sbjct: 414 LCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPN 473

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              YN L+SG  QV    DA+++  KM  N   P   T+ T IDGLCK     EA  V +
Sbjct: 474 SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAR 533

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +        I TY  LI GL    ++  A  ++ ++ +KG   DV+  + +IH LC  G
Sbjct: 534 EMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG 593

Query: 519 QMDKANDLLLDM-EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           ++D+A  +  DM E KNC P+ VT+ TL+ G  +     K   L   +  + L    +S 
Sbjct: 594 KVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653

Query: 578 SSKVVDLLSKDK 589
           ++++  L S D+
Sbjct: 654 NTRIKGLCSCDR 665



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 234/443 (52%), Gaps = 4/443 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++ ++L  L K  ++  V  +++R+ +N L PD+    +LI+ LC+ G   GA  V
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              I+++    +   +N L+ G C  GR+ EA + +     FA   N+ T+N +I GL  
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAG-FAGLRNLRTYNIMIKGLFD 380

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           +     A++L++ +  E    C PD VT+ ++I GLC++GF +KA  +  + +      +
Sbjct: 381 SGMVDEAIELWDLL--EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLD 438

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V +Y+S+I G C V    +A  ++ +M  +G +P+   +NA+I+  C+  +     R+  
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M   G +P  +TYN+L+DG C   +   A  +   MV  G   D+ +Y  LI     D+
Sbjct: 499 KMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK 558

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTF 437
           K++DA+ +++++L + ++  V+ +N L+ GL   G + +AL +   M +  +  P+  T+
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTY 618

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T +DGL + G++ +A  ++ +I     E  I +YN  I GLC   R+    +L   +  
Sbjct: 619 NTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS 678

Query: 498 KGPIPDVVTCSTMIHWLCKEGQM 520
           +G IP V+T + ++  + K G +
Sbjct: 679 RGIIPTVITWNILVRAVIKYGPI 701



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 265/524 (50%), Gaps = 14/524 (2%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           ++L+  ++    D  +  F+ L S  G  P +   N L++   +    S A      +  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147

Query: 145 SCF----TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
             F     PN  T+N ++  LCA G +  A  LF  L      P+ +T++TL+ GL +  
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQD 207

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNV 259
               AL L +EM     +  +PDVV YN+++ G  K G  +K   +  ++ KD    PN+
Sbjct: 208 RLDHALDLLDEMPR---SRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNL 264

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
            TYN ++ G C    +KE   ++  M+ N +QPDV+T+  +I+  C+ G +D   R+   
Sbjct: 265 ATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSE 324

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           +I+ G+  D   YNSL+ GFC  GR+  A + + S    G R ++ +YNI+I        
Sbjct: 325 IIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGM 383

Query: 380 VEDAVCLYREMLSERIR--PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           V++A+ L+ ++L + +   P  +T+ TL+ GL Q G    A  + ++ +++    D F++
Sbjct: 384 VDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSY 442

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           ++ I+GLC  G +++AV+V++ +    C+     YN LI+G C++ R   A +++ ++  
Sbjct: 443 SSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD 502

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G  P V+T +T+I  LCK  +  +A+ +  +M      P   T+ +L+RG   + K   
Sbjct: 503 NGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDD 562

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            + +  ++  + L V D+ + + ++  L    K  E L+ F  +
Sbjct: 563 ALSIWKQILYKGLKV-DVMMHNILIHGLCSAGKVDEALHVFSDM 605



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 128/247 (51%), Gaps = 2/247 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  ++ M K    P    +  L++   +  +    V ++ ++  NG  P +   N LI
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK      A  V   ++ + FTP+  T+  LI GL ++ +I +A  ++K++      
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            +V+  N LI+GLC       AL +F +M  +    C P++VTYN+++DGL + G++DKA
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKN--CPPNLVTYNTLMDGLYETGYIDKA 634

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L   + +  + P++I+YN+ I G C  D   E   L  E++  G+ P V+T+N ++  
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694

Query: 304 NCKDGKM 310
             K G +
Sbjct: 695 VIKYGPI 701



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 4/206 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++AV  +  M     SP + ++  L+  L K ++Y    S+ + +  NG  PD+     
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI  L        A  +  +IL      + +  N LI+GLC+ G++ EA  +F  +    
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKK 609

Query: 182 -CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            C PN+VT+NTL++GL  T     A  L+  +  +     +PD+++YN+ I GLC    +
Sbjct: 610 NCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG---LEPDIISYNTRIKGLCSCDRI 666

Query: 241 DKAKELLLQMKDRNINPNVITYNSLI 266
            +  +LL ++  R I P VIT+N L+
Sbjct: 667 HEGIQLLDEVLSRGIIPTVITWNILV 692



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 1/106 (0%)

Query: 63  NEAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +EA++ F  M + K   P + ++  L+  L +    D   +L+  +  +GL PD+   N 
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
            I  LC          +L  +L     P  +T+N L+  +   G I
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 257/523 (49%), Gaps = 9/523 (1%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F+ MI+    P + +  I+L +L  ++  +    +++ +  +G+ P +   N +++   K
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G       +   + R     + VT+N LING    G++ EA R    +          +
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYS 346

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FN LI G C+      A  + +EM+N   A   P   TYN  I  LC+ G +D A+ELL 
Sbjct: 347 FNPLIEGYCKQGLFDEAWGVTDEMLN---AGIYPTTSTYNIYIRALCEFGRIDDARELLS 403

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M      P+V++YN+L+ G+  +  + EA  LF ++    + P +VT+N +I+  C+ G
Sbjct: 404 SM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESG 459

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            ++   RL E M  + + PD +TY +L+ GF   G +S A E++  M+ KG + D Y+Y 
Sbjct: 460 NLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYT 519

Query: 369 ILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
                  +    E A  L+ EM++E    P +  YN  + GL +VGNL  A++   K+  
Sbjct: 520 TRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFR 579

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             +VPD  T+ T I G  + G    A  ++  + + +    + TY  LI+G  K GRL+ 
Sbjct: 580 VGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQ 639

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A +    ++ +G  P+V+T + ++H +CK G +D+A   L  ME +   P++ ++  L+ 
Sbjct: 640 AFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILIS 699

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
                +K  +VV L  +M  +K +  D      +   L KD +
Sbjct: 700 KHCDLDKWEEVVKLYKEM-LDKEIEPDGYTHRALFKHLEKDHE 741



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 219/489 (44%), Gaps = 35/489 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   ++ M+     P + +F  +L    K    + V  ++  +    +       N+L
Sbjct: 256 NKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 315

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA---------ARL 173
           IN   K G    A    G + RS F     +FN LI G C +G   EA         A +
Sbjct: 316 INGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGI 375

Query: 174 FKKLNVF----------------------ACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           +   + +                         P+VV++NTL++G  + R  + A  LF++
Sbjct: 376 YPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDD 435

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           +  + G I  P +VTYN++IDGLC+ G ++ A+ L  +M  + I P+VITY +L+ GF  
Sbjct: 436 L--KAGNI-NPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVK 492

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN-PDTV 330
             +   A  ++ EM+  G++PD   +        + G  +K  RL E M+    + PD  
Sbjct: 493 NGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLT 552

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
            YN  +DG C VG + +A E    +   G   D  +Y  +I    +  + + A  LY EM
Sbjct: 553 IYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEM 612

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           LS+R+ PSVITY  L+ G  + G L  A +   +M+   V P+  T    + G+CK G +
Sbjct: 613 LSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNI 672

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            EA +    +          +Y  LI+  C + + +   KL+  +  K   PD  T   +
Sbjct: 673 DEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRAL 732

Query: 511 IHWLCKEGQ 519
              L K+ +
Sbjct: 733 FKHLEKDHE 741



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 166/359 (46%), Gaps = 10/359 (2%)

Query: 24  CSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTS 83
           C FGR  + +  LSS    D  S    ++   K       EA   FD +     +P + +
Sbjct: 390 CEFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMRKFV--EASLLFDDLKAGNINPSIVT 447

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  L+  L ++   +    L + + S  ++PD+     L+    K G  S A  +   +L
Sbjct: 448 YNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEML 507

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD---PNVVTFNTLINGLCRTR 200
           R    P+   +     G    G   +A RL +++   A D   P++  +N  I+GLC+  
Sbjct: 508 RKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEM--VAEDHHAPDLTIYNVRIDGLCKVG 565

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           N   A++ F+  +   G +  PD VTY ++I G  + G    A++L  +M  + ++P+VI
Sbjct: 566 NLEKAIE-FQRKIFRVGLV--PDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVI 622

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY  LI G       ++A     EM   GV+P+V+T NA+++  CK G +D+  R L  M
Sbjct: 623 TYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKM 682

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
            + G++P+  +Y  L+   C + +     +L+  M+ K    D Y++  L     KD +
Sbjct: 683 EEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 741



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 86/197 (43%)

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K    E  +  + +M+ +   PSV   N +L  L     +  A ++ + M ++ ++P  
Sbjct: 215 TKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTV 274

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            TF T +D   K G +    +++  ++    E    TYN LING  K G+++ A +    
Sbjct: 275 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGD 334

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +Q  G      + + +I   CK+G  D+A  +  +M      P+  T+   +R   +  +
Sbjct: 335 MQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGR 394

Query: 555 KSKVVVLLHKMAAEKLV 571
                 LL  MAA  +V
Sbjct: 395 IDDARELLSSMAAPDVV 411


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 242/472 (51%), Gaps = 11/472 (2%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +LLT  A  + + T + L+ R+ S  L      L+ L++ L     ++ AF +   + R 
Sbjct: 93  LLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALP----SAPAFALFADMFRL 148

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
                T TFN ++  LC+ G+   A  L +++      PN VT+NT+I G C       A
Sbjct: 149 RLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAA 204

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVITYNS 264
           L +  EM  E G I  P+  TY ++I G CK G VD+A ++  +M  +  + P  + YN+
Sbjct: 205 LDIMREM-RERGGIA-PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 262

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI G+C       A      M++ GV   V T+N +++    DG+  +   L+E M  +G
Sbjct: 263 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 322

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           +  D  TYN L++G C  G + +A E+F +M  +G R  V +Y  LI A  K  +V++  
Sbjct: 323 LALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 382

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ E +   IRP ++ YN L++     GN+  A +++ +M+   + PD  T+ T + GL
Sbjct: 383 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 442

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G V EA ++   +     +  + TYN LI+G    G +K A ++ + + +KG  P +
Sbjct: 443 CLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 502

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
           +T + +I  LCK GQ D A +++ +M      P + T+ +L+ G    ++++
Sbjct: 503 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 554



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 246/501 (49%), Gaps = 18/501 (3%)

Query: 97  YDTVVSLFKRLNSNGLFPDL-----FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNT 151
           + + +S  K L+   + P L      + NLL+     +   + +  +  R+       +T
Sbjct: 64  FKSALSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIST 123

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
            + + L++ L +       A +F+ L +  C     TFN ++  LC       AL+L  +
Sbjct: 124 ASLHPLLSALPSAPAFALFADMFR-LRLPLC---TTTFNIMLRHLCSAGKPARALELLRQ 179

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVITYNSLICGFC 270
           M        +P+ VTYN++I G C  G V  A +++ +M++R  I PN  TY ++I G+C
Sbjct: 180 M-------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 232

Query: 271 CVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
            V    EA  +F EM+  G V+P+ V +NA+I   C  GK+D      + M++RGV    
Sbjct: 233 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 292

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN L+    + GR + A EL   M  KG   DV++YNILIN +CK+  V+ A+ ++  
Sbjct: 293 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFEN 352

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    +R +V+TY +L+  L + G + +  KL D+     + PD   +   I+    +G 
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           +  A ++   +   +      TYN L+ GLC +GR+  A KL   +  +G  PD+VT +T
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 472

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           +I     +G +  A  +  +M  K   P+ +T+  L++G  +N +      ++ +M    
Sbjct: 473 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 532

Query: 570 LVVSDLSLSSKVVDLLSKDKK 590
           +   D +  S +  L ++D++
Sbjct: 533 ITPDDSTYISLIEGLTTEDER 553



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 194/376 (51%), Gaps = 5/376 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMG 130
           +++  P P   ++  ++       +    + + + +    G+ P+ +    +I+  CK+G
Sbjct: 176 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 235

Query: 131 ITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
               A  V   +L +    P  V +N LI G C +G++  A     ++        V T+
Sbjct: 236 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 295

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N L++ L        A +L EEM  +  A+   DV TYN +I+G CK+G V KA E+   
Sbjct: 296 NLLVHALFMDGRGTEAYELVEEMGGKGLAL---DVFTYNILINGHCKEGNVKKALEIFEN 352

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  R +   V+TY SLI         +E   LF E +  G++PD+V +NA+IN +   G 
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+   ++  M ++ + PD VTYN+LM G CL+GR+  AR+L   M  +G + D+ +YN 
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 472

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+       V+DA+ +  EM+++   P+++TYN L+ GL + G   DA  ++ +M  N 
Sbjct: 473 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 532

Query: 430 VVPDSFTFATYIDGLC 445
           + PD  T+ + I+GL 
Sbjct: 533 ITPDDSTYISLIEGLT 548



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 150/278 (53%), Gaps = 3/278 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ + D M++   +  + ++ +L+  L  + +      L + +   GL  D+F  N+L
Sbjct: 274 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNIL 333

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G    A  +   + R       VT+  LI  L  +G++ E  +LF +      
Sbjct: 334 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 393

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++V +N LIN    + N   A ++  EM  +  A   PD VTYN+++ GLC  G VD+
Sbjct: 394 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA---PDDVTYNTLMRGLCLLGRVDE 450

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++L+ +M  R I P+++TYN+LI G+    D K+A  +  EMM+ G  P ++T+NA+I 
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
             CK+G+ D    +++ M++ G+ PD  TY SL++G  
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 161/322 (50%), Gaps = 5/322 (1%)

Query: 63  NEAVYFFDCMI-KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +EAV  FD M+ K +  P    +  L+       + DT +    R+   G+   +   NL
Sbjct: 238 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 297

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++ L   G  + A+ ++  +       +  T+N LING C EG + +A  +F+ ++   
Sbjct: 298 LVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRG 357

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
               VVT+ +LI  L +        KLF+E V       +PD+V YN++I+     G +D
Sbjct: 358 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRG---IRPDLVLYNALINSHSTSGNID 414

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A E++ +M+ + I P+ +TYN+L+ G C +    EA+ L  EM   G+QPD+VT+N +I
Sbjct: 415 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 474

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +     G +    R+   M+ +G NP  +TYN+L+ G C  G+   A  +   MV  G  
Sbjct: 475 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 534

Query: 362 HDVYSYNILINA-NCKDQKVED 382
            D  +Y  LI     +D++  D
Sbjct: 535 PDDSTYISLIEGLTTEDERAID 556



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 119/225 (52%), Gaps = 5/225 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K GN+   +A+  F+ M +      + ++T L+  L+K  Q      LF     
Sbjct: 333 LINGHCKEGNV--KKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ PDL + N LIN     G    AF ++G + +    P+ VT+N L+ GLC  GR+ E
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A +L  ++      P++VT+NTLI+G     +   AL++  EM+N+      P ++TYN+
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG---FNPTLLTYNA 507

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
           +I GLCK+G  D A+ ++ +M +  I P+  TY SLI G    D+
Sbjct: 508 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 160/558 (28%), Positives = 257/558 (46%), Gaps = 67/558 (12%)

Query: 60  ITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
           ++S+EA +  + +   + S  +TS+  L  +L++    D +  LFK + ++G+ P+L   
Sbjct: 134 VSSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISF 193

Query: 120 NLLINCLCKMG----------------ITSGAFVVLGRILRSC-------------FTP- 149
           N ++N  CK+G                    +F     IL  C               P 
Sbjct: 194 NTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQ 253

Query: 150 -----NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
                N V++  LI+G C  G+I EA  LF ++    C P+V T+  L+   C       
Sbjct: 254 EGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETE 313

Query: 205 ALKLFEEMV---------------NEFGAICKPD-----------------VVTYNSIID 232
           ALK FEEMV               + F  + K D                 VV +N++ID
Sbjct: 314 ALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALID 373

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G CK G ++ A  +L  MK   + PN  TYN LICGFC       A  L  +M +N + P
Sbjct: 374 GYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSP 433

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           ++VT+N +I+  CK   +D   RL  LMI+ G  PD  T+ + +D  C +G++ +A ++F
Sbjct: 434 NLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVF 493

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
            S+  K    + + Y  LI+  CK +K  DA  L++ ML E   P+ IT+N LL GL + 
Sbjct: 494 ESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKE 553

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G + DA+ L+D M   D  P   T+   I+ + +      A      + +  C+  + TY
Sbjct: 554 GKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTY 613

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
              I   C+ GRL  A ++  +++ +G + D      +++     GQ+D A  +L+ M  
Sbjct: 614 TAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFD 673

Query: 533 KNCVPSEVTFCTLLRGFV 550
             C PS  T+  LL+  +
Sbjct: 674 TGCEPSRQTYSILLKHLI 691



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 247/549 (44%), Gaps = 64/549 (11%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+ FF+ M++    P + ++T+L+    K  + D  + +   +   GL   +   N LI
Sbjct: 313 EALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G+   A  VL  +  +   PN+ T+N LI G C +  +  A  L  K+      
Sbjct: 373 DGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLS 432

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+VT+NTLI+GLC+ R    A +L   M+ + G +  PD  T+ + ID LCK G V++A
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD-GFV--PDQRTFCAFIDCLCKMGKVEQA 489

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ++   +K+++   N   Y +LI G+C  + + +A  LF  M+  G  P+ +TFN +++ 
Sbjct: 490 HQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDG 549

Query: 304 NCKDGKM-----------------------------------DKVNRLLELMIQRGVNPD 328
             K+GK+                                   D+ N  L+ MI  G  P+
Sbjct: 550 LRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPN 609

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            VTY + +  +C  GR+  A E+ V +  +G   D + Y++L+NA     +++ A  +  
Sbjct: 610 VVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLI 669

Query: 389 EMLSERIRPSVITYNTLL--------------------------SGLFQVGNLGDALKLI 422
            M      PS  TY+ LL                          + ++++ +      L 
Sbjct: 670 RMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLF 729

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           +KM     VP+  T++  I GLCK   +  A ++F  ++          +N L++  CK+
Sbjct: 730 EKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKL 789

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G  + A +L   +     +  + +   ++  L ++G  +KA ++   + +      EV +
Sbjct: 790 GMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVW 849

Query: 543 CTLLRGFVQ 551
             LL G V+
Sbjct: 850 KVLLDGLVR 858



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 233/498 (46%), Gaps = 29/498 (5%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M   K  P   ++  L+    + K  D  ++L  ++  N L P+L   N LI
Sbjct: 383 DAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLI 442

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK  +   A+ +   +++  F P+  TF   I+ LC  G++ +A ++F+ L     +
Sbjct: 443 HGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAE 502

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            N   +  LI+G C+      A  LF+ M+ E    C P+ +T+N ++DGL K+G V+ A
Sbjct: 503 ANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG---CFPNSITFNVLLDGLRKEGKVEDA 559

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L+  M   +  P V TY  LI       D+  A     +M+ +G QP+VVT+ A I  
Sbjct: 560 MSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKA 619

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G++ +   ++  + + G+  D+  Y+ L++ +  +G++  A  + + M   GC   
Sbjct: 620 YCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPS 679

Query: 364 VYSYNILI-------------------------NANC-KDQKVEDAVCLYREMLSERIRP 397
             +Y+IL+                         NAN  K    E    L+ +M+ +   P
Sbjct: 680 RQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVP 739

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +V TY+ L+ GL +V +L  A +L + M+ + + P      + +   CK G   EA+++ 
Sbjct: 740 NVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLL 799

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
            ++        +E+Y  L+ GL + G  + A ++F  L   G   D V    ++  L ++
Sbjct: 800 DSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRK 859

Query: 518 GQMDKANDLLLDMEAKNC 535
           G +D+ + L   ME   C
Sbjct: 860 GYVDECSQLRDIMEKTGC 877



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 189/380 (49%), Gaps = 1/380 (0%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V +YN +   L + G +D+   L   M +  + PN+I++N+++   C + +   AK  F 
Sbjct: 155 VTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFC 214

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
            +M  G   D  T+ ++I   CK  ++    ++ E+M Q G   + V+Y +L+ GFC VG
Sbjct: 215 GLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVG 274

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           +I  A ELF  M   GC  DV +Y +L+ A C+  K  +A+  + EM+   I P+V TY 
Sbjct: 275 KIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYT 334

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            L+    +VG + + ++++  M    +V     F   IDG CK G + +A+ V  +++  
Sbjct: 335 VLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLN 394

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           K      TYN LI G C+   +  A  L +++      P++VT +T+IH LCK   +D A
Sbjct: 395 KVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSA 454

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             L   M     VP + TFC  +    +  K  +   +   +  EK   ++  L + ++D
Sbjct: 455 WRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESL-KEKHAEANEFLYTALID 513

Query: 584 LLSKDKKYRECLNQFRHLLF 603
              K +K+ +    F+ +LF
Sbjct: 514 GYCKAEKFSDAHLLFKRMLF 533



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 201/475 (42%), Gaps = 58/475 (12%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+   + M + K SP + ++  L+  L K +  D+   L   +  +G  PD       
Sbjct: 417 DRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAF 476

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+CLCKMG    A  V   +       N   +  LI+G C   +  +A  LFK++    C
Sbjct: 477 IDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGC 536

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKL-------------------FEEMVNE-------- 215
            PN +TFN L++GL +      A+ L                    EE++ E        
Sbjct: 537 FPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANM 596

Query: 216 -----FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                  + C+P+VVTY + I   C+ G + +A+E+++++K+  I  +   Y+ L+  + 
Sbjct: 597 FLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYG 656

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY---------------NCKDGKMDKVN- 314
           C+     A  + I M D G +P   T++ ++ +               N  +  +D  N 
Sbjct: 657 CIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANI 716

Query: 315 ----------RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
                      L E M+++G  P+  TY+ L+ G C V  +S A  LF  M   G     
Sbjct: 717 WKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSE 776

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             +N L+++ CK    E+A+ L   M+       + +Y  L+ GLF+ GN   A ++   
Sbjct: 777 NIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRS 836

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +       D   +   +DGL + G+V E  Q+   +    C L  +T+  L   L
Sbjct: 837 LLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQEL 891


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/441 (31%), Positives = 234/441 (53%), Gaps = 3/441 (0%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P+    ++LI+ LC++G    AF +  ++      P+T T+  LI  LC  G I +A  L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           F ++    C PNV T+  LI+GLCR      A  +  +MV + G    P V+TYN++I+G
Sbjct: 324 FDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD-GIF--PSVITYNALING 380

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            CKDG V  A ELL  M+ R   PNV T+N L+ G C V    +A  L   M+DNG+ PD
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           +V++N +I+  C++G M+   +LL  M    + PD +T+ ++++ FC  G+   A     
Sbjct: 441 IVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLG 500

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+ KG   D  +   LI+  C   K  DA+ +   ++  R+  +  + N +L  L +  
Sbjct: 501 LMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGC 560

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L + L ++ K+    +VP   T+ T +DGL ++G +  + ++ + ++   C   +  Y 
Sbjct: 561 KLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYT 620

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +INGLC+ GR++ A KL   +Q  G  P+ VT + M+      G++D+A + +  M  +
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680

Query: 534 NCVPSEVTFCTLLRGFVQNNK 554
               ++  + +LLRGFV + K
Sbjct: 681 GYELNDRIYSSLLRGFVLSQK 701



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/546 (28%), Positives = 259/546 (47%), Gaps = 39/546 (7%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           ++ LL  LAK          ++R+ ++G    +     ++N LCK G T  A + + +IL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKIL 222

Query: 144 RSCF------------------------------------TPNTVTFNFLINGLCAEGRI 167
           +  F                                     PN+V+++ LI+GLC  GR+
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRL 282

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            EA  L  ++    C P+  T+  LI  LC       A  LF+EM+      CKP+V TY
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG---CKPNVHTY 339

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
             +IDGLC+DG +++A  +  +M    I P+VITYN+LI G+C       A  L   M  
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
              +P+V TFN ++   C+ GK  K   LL+ M+  G++PD V+YN L+DG C  G ++ 
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNV 459

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A +L  SM S     D  ++  +INA CK  K + A      ML + I    +T  TL+ 
Sbjct: 460 AYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G+  VG   DAL +++ +    ++    +    +D L K   + E + +   I       
Sbjct: 520 GVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVP 579

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + TY  L++GL + G +  + ++   ++  G +P+V   + +I+ LC+ G++++A  LL
Sbjct: 580 SVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
             M+     P+ VT+  +++G+V N K  + +  +  M      ++D   SS +   +  
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLS 699

Query: 588 DKKYRE 593
            K  RE
Sbjct: 700 QKGIRE 705



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 231/437 (52%), Gaps = 4/437 (0%)

Query: 64  EAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +A+  FD M +    +P   S++IL+  L +  + +    L  ++   G  P      +L
Sbjct: 248 DALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  LC  G+   AF +   ++     PN  T+  LI+GLC +G+I EA  + +K+     
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGI 367

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V+T+N LING C+    + A +L   M       CKP+V T+N +++GLC+ G   K
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKR---ACKPNVRTFNELMEGLCRVGKPYK 424

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL +M D  ++P++++YN LI G C       A  L   M    ++PD +TF A+IN
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIIN 484

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK GK D  +  L LM+++G++ D VT  +L+DG C VG+   A  +  ++V      
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLT 544

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
             +S N++++   K  K+++ + +  ++    + PSV+TY TL+ GL + G++  + +++
Sbjct: 545 TPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRML 604

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M+L+  +P+ + +   I+GLC+ G V EA ++  A+++        TY  ++ G    
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664

Query: 483 GRLKTACKLFHRLQHKG 499
           G+L  A +    +  +G
Sbjct: 665 GKLDRALETVRAMVERG 681



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 241/526 (45%), Gaps = 29/526 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   FD MI     P + ++T+L+  L ++ + +    + +++  +G+FP +   N L
Sbjct: 318 DKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNAL 377

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G    AF +L  + +    PN  TFN L+ GLC  G+  +A  L K++     
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++V++N LI+GLCR  +  VA KL   M N F    +PD +T+ +II+  CK G  D 
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNVAYKLLTSM-NSFDL--EPDCLTFTAIINAFCKQGKADV 494

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A   L  M  + I+ + +T  +LI G C V   ++A  +   ++   +     + N +++
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILD 554

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K  K+ +   +L  + + G+ P  VTY +L+DG    G IS +  +   M   GC  
Sbjct: 555 MLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLP 614

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +VY Y I+IN  C+  +VE+A  L   M    + P+ +TY  ++ G    G L  AL+ +
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674

Query: 423 DKM-----QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL--RIETYNC- 474
             M     +LND +  S             GFVL    + +    C  EL   +E     
Sbjct: 675 RAMVERGYELNDRIYSSLL----------RGFVLSQKGIRETDPECIKELISVVEQLGGS 724

Query: 475 -------LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
                  L+  LCK GR   +  L   +   G   +      ++   C + +  K  +L+
Sbjct: 725 TSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAI-DIIMESYCSKKKHTKCVELI 783

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
             +     VPS  +FC +++G  +     +   L+ ++     VV 
Sbjct: 784 TLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVE 829



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 175/370 (47%), Gaps = 37/370 (10%)

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG----------KMD 311
           Y+SL+     +D    A   +  M  +G    ++ +  ++N  CK+G          K+ 
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKIL 222

Query: 312 KVNRLLELMIQ--------RGVN------------------PDTVTYNSLMDGFCLVGRI 345
           KV  LL+  I         RG+N                  P++V+Y+ L+ G C VGR+
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRL 282

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A  L   M  KGC+    +Y +LI A C    ++ A  L+ EM++   +P+V TY  L
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVL 342

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + GL + G + +A  +  KM  + + P   T+   I+G CK+G V+ A ++   +    C
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +  + T+N L+ GLC++G+   A  L  R+   G  PD+V+ + +I  LC+EG M+ A  
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYK 462

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           LL  M + +  P  +TF  ++  F +  K       L  M  + + + +++  + ++D +
Sbjct: 463 LLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT-GTTLIDGV 521

Query: 586 SKDKKYRECL 595
               K R+ L
Sbjct: 522 CNVGKTRDAL 531



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 164/375 (43%), Gaps = 54/375 (14%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A++  + ++KM+      S  ++L ML+K  +    +++  ++N  GL P +     
Sbjct: 527 TRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTT 586

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++ L + G  SG+F +L  +  S   PN   +  +INGLC  GR+ EA +L   +    
Sbjct: 587 LVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN VT+  ++ G                 VN                      +G +D
Sbjct: 647 VSPNHVTYTVMVKG----------------YVN----------------------NGKLD 668

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDW---KEAKCL--FIEMMDN--GVQPDV 294
           +A E +  M +R    N   Y+SL+ GF          + +C+   I +++   G    +
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGL 728

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
             F  ++   CK+G+ D+ N L++ +++ GV  +    + +M+ +C   + ++  EL   
Sbjct: 729 CIF--LVTRLCKEGRTDESNGLVQTILKSGVFLEKAI-DIIMESYCSKKKHTKCVELITL 785

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER---IRPSVITYNTLLSGLFQ 411
           ++  G      S+ ++I    K+   E A  L  E+L+      +  V+ Y   +  L +
Sbjct: 786 VLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLPY---VECLME 842

Query: 412 VGNLGDALKLIDKMQ 426
            G+  + + L+D++ 
Sbjct: 843 TGDCSEVIDLVDQLH 857


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/276 (43%), Positives = 168/276 (60%), Gaps = 3/276 (1%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           + V FN L+NGLC EGR++EA  L  ++      PN VT+ T++NG+C+  +T  AL L 
Sbjct: 9   DVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLL 68

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            +M        K DVV Y +IID LCKDG   KA+ L  +M D+ I PNV+TYN +I G 
Sbjct: 69  RKMDESH---IKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGC 125

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C    W +A+ L  +M+++ V PDVVTFNA+IN   K+GK+ +   L   M+ R + PDT
Sbjct: 126 CSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDT 185

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TYNSL+DGFC   R+  A+ +F  MVSKG   +V + N LI   C+ ++V+D + L  E
Sbjct: 186 ITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHE 245

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           ML   + P  ++YNTL+ G  Q G+L  A  L  +M
Sbjct: 246 MLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/280 (38%), Positives = 165/280 (58%), Gaps = 3/280 (1%)

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            C  +VV FNTL+NGLCR    L A  L + MV E G   +P+ VTY +I++G+CK G  
Sbjct: 5   GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMV-ENGH--QPNEVTYGTIVNGMCKMGDT 61

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D A  LL +M + +I  +V+ Y ++I   C      +A+ LF EM D G+ P+V+T+N M
Sbjct: 62  DSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCM 121

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  C  GK     +LL  MI+  V+PD VT+N+L++ F   G+IS A EL+  M+ +  
Sbjct: 122 IDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNI 181

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D  +YN LI+  CK  +++DA  ++  M+S+   P+VIT NTL+ G  +   + D +K
Sbjct: 182 FPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIK 241

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           L+ +M    +VPDS ++ T I G C+ G +  A  +FQ +
Sbjct: 242 LLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 162/287 (56%), Gaps = 3/287 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++      + +F  L+  L +  +     +L  R+  NG  P+      ++N +CKMG 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T  A  +L ++  S    + V +  +I+ LC +G   +A  LF +++     PNV+T+N 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I+G C       A +L  +M+    +   PDVVT+N++I+   K+G + +A+EL  +M 
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIE---SNVDPDVVTFNALINAFVKEGKISEAEELYREML 177

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            RNI P+ ITYNSLI GFC      +AK +F  M+  G  P+V+T N +I   C+  ++D
Sbjct: 178 GRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVD 237

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
              +LL  M++RG+ PD+V+YN+L+ GFC  G ++ A++LF  M+S+
Sbjct: 238 DGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 151/281 (53%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M ++    +V+ +N+L+ G C      EA+ L   M++NG QP+ VT+  ++N  CK G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
            D    LL  M +  +  D V Y +++D  C  G  S+A+ LF  M  KG   +V +YN 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           +I+  C   K  DA  L R+M+   + P V+T+N L++   + G + +A +L  +M   +
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + PD+ T+ + IDG CK+  + +A  +F  + +      + T N LI G C+  R+    
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           KL H +  +G +PD V+ +T+IH  C+ G ++ A DL  +M
Sbjct: 241 KLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 158/283 (55%), Gaps = 3/283 (1%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G   D+   N L+N LC+ G    A  ++ R++ +   PN VT+  ++NG+C  G    A
Sbjct: 5   GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSA 64

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             L +K++      +VV +  +I+ LC+  +   A  LF EM ++ G    P+V+TYN +
Sbjct: 65  LNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEM-HDKGIF--PNVLTYNCM 121

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           IDG C  G    A++LL  M + N++P+V+T+N+LI  F       EA+ L+ EM+   +
Sbjct: 122 IDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNI 181

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PD +T+N++I+  CK  ++D    + +LM+ +G +P+ +T N+L+ G C   R+    +
Sbjct: 182 FPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIK 241

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           L   M+ +G   D  SYN LI+  C+   +  A  L++EM+S+
Sbjct: 242 LLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 141/290 (48%), Gaps = 6/290 (2%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M+++G   D V +N+LM+G C  GR+  A  L   MV  G + +  +Y  ++N  CK   
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            + A+ L R+M    I+  V+ Y  ++  L + G+   A  L  +M    + P+  T+  
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            IDG C  G   +A Q+ + +     +  + T+N LIN   K G++  A +L+  +  + 
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             PD +T +++I   CK  ++D A  +   M +K   P+ +T  TL+ G  +  +    +
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 560 VLLHKMAAEKLVVSDLSLSS------KVVDLLSKDKKYRECLNQFRHLLF 603
            LLH+M    LV   +S ++      +  DL +    ++E ++Q R +L 
Sbjct: 241 KLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQVRWILI 290



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 6/158 (3%)

Query: 24  CSFGRPPNPKTDL----SSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           CS+G+  + +  L     S+   D  +    +N   K G I+  E +Y    M+     P
Sbjct: 126 CSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYRE--MLGRNIFP 183

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
              ++  L+    K+ + D    +F  + S G  P++  +N LI   C+         +L
Sbjct: 184 DTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLL 243

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             +LR    P++V++N LI+G C  G +  A  LF+++
Sbjct: 244 HEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/437 (34%), Positives = 238/437 (54%), Gaps = 9/437 (2%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLF--PDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           LL   AKN  Y    ++F  L+  G +   +  ++++L+    K G    A     R   
Sbjct: 129 LLDSFAKNAHYSNS-TIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGD 187

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
             F  + ++ N ++  L  EGRI     ++K++       NVVTF+ +INGLC+      
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A  + E+M   +G    P V+TYN+IIDG CK G + KA  LL +M  + I+PN IT+N 
Sbjct: 248 AGDVVEDM-KAWG--FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNI 304

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI GFC  ++   AK +F EM   G+QP+VVT+N++IN  C +GK+D+   L + M   G
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + P+ VTYN+L++GFC    +  ARE+   +  +G   +V ++N LI+A  K  +++DA 
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L   ML   + P+V TYN L+ G  + GN+ +A KL  +M+ N +  D  T+   +D L
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484

Query: 445 CKNGFVLEAVQVFQAIRNCKCELR---IETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           CK G   +AV++   +   + + R   I TYN LI G C  G+L+ A +L + +  KG I
Sbjct: 485 CKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLI 544

Query: 502 PDVVTCSTMIHWLCKEG 518
           P+  T   +   + ++G
Sbjct: 545 PNRTTYDILRDEMMEKG 561



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 203/403 (50%), Gaps = 41/403 (10%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +L+    KN + D  +  F R    G        N ++  L K G       V   ++R 
Sbjct: 164 MLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR 223

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT-------------- 191
               N VTF+ +INGLC  G+  +A  + + +  +   P+V+T+NT              
Sbjct: 224 RIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283

Query: 192 ---------------------LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
                                LI+G CR  N   A K+FEEM  +     +P+VVTYNS+
Sbjct: 284 DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG---LQPNVVTYNSL 340

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           I+GLC +G +D+A  L  +M    + PNV+TYN+LI GFC     KEA+ +  ++   G+
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P+V+TFN +I+   K G+MD    L  +M+  GV P+  TYN L+ GFC  G +  AR+
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM-LSERI--RPSVITYNTLLS 407
           L   M   G + D+ +YNIL++A CK  +   AV L  EM L E+   R +++TYN L+ 
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIK 520

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           G    G L +A +L+++M    ++P+  T+    D + + GF+
Sbjct: 521 GFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 563



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 258/541 (47%), Gaps = 46/541 (8%)

Query: 26  FGRPPNPKTDLSSHHFKDGTSIAKFLNDRH--------KSGNITS-------NEAV---- 66
           F  P +  T  +SH F D  +I++ +  +H        K  N +S       +EA     
Sbjct: 32  FSSPNSTYTTPNSHTF-DTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLI 90

Query: 67  --YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
             YF     +      +  F  LL +LA  K Y+ + +L      N  + +  + + L  
Sbjct: 91  LCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL-- 148

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
                            +L S    N++  + L+      G +  A   F +   +    
Sbjct: 149 ----------------SVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRL 192

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + ++ N ++  L +     V   +++EM+     +   +VVT++ +I+GLCK G   KA 
Sbjct: 193 SALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGV---NVVTFDVVINGLCKVGKFQKAG 249

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +++  MK    +P+VITYN++I G+C      +A  L  EM+   + P+ +TFN +I+  
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C+D  +    ++ E M ++G+ P+ VTYNSL++G C  G++  A  L   M   G + +V
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN LIN  CK + +++A  +  ++    + P+VIT+NTL+    + G + DA  L   
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    V P+  T+   I G C+ G V EA ++ + +     +  + TYN L++ LCK G 
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489

Query: 485 LKTACKLFHRL---QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            + A +L   +   + KG   ++VT + +I   C +G++++AN LL +M  K  +P+  T
Sbjct: 490 TRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549

Query: 542 F 542
           +
Sbjct: 550 Y 550



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 193/365 (52%), Gaps = 8/365 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I   E+VY    MI+ +    + +F +++  L K  ++     + + + + G  P 
Sbjct: 206 KEGRIGVVESVY--KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPS 263

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N +I+  CK G    A  +L  ++     PN +TFN LI+G C +  +  A ++F+
Sbjct: 264 VITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFE 323

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PNVVT+N+LINGLC       AL L ++M    G   KP+VVTYN++I+G C
Sbjct: 324 EMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS---GMGLKPNVVTYNALINGFC 380

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   + +A+E+L  +  R + PNVIT+N+LI  +       +A  L   M+D GV P+V 
Sbjct: 381 KKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVS 440

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I   C++G + +  +L + M   G+  D VTYN L+D  C  G   +A  L   M
Sbjct: 441 TYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500

Query: 356 V---SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
                KG R ++ +YN+LI   C   K+E+A  L  EML + + P+  TY+ L   + + 
Sbjct: 501 TLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEK 560

Query: 413 GNLGD 417
           G + D
Sbjct: 561 GFIPD 565



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 196/347 (56%), Gaps = 3/347 (0%)

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N ++  L K+G +   + +  +M  R I  NV+T++ +I G C V  +++A  +  +M  
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G  P V+T+N +I+  CK GKM K + LL+ M+ + ++P+ +T+N L+DGFC    ++ 
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTA 317

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A+++F  M  +G + +V +YN LIN  C + K+++A+ L  +M    ++P+V+TYN L++
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G  +   L +A +++D +    + P+  TF T ID   K G + +A  +   + +     
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + TYNCLI G C+ G +K A KL   ++  G   D+VT + ++  LCK+G+  KA  LL
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 528 LDM---EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +M   E K    + VT+  L++GF    K  +   LL++M  + L+
Sbjct: 498 DEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLI 544



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 164/314 (52%), Gaps = 1/314 (0%)

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           F    D G +   ++ N M+    K+G++  V  + + MI+R +  + VT++ +++G C 
Sbjct: 182 FDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCK 241

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           VG+  +A ++   M + G    V +YN +I+  CK  K+  A  L +EM+++RI P+ IT
Sbjct: 242 VGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +N L+ G  +  N+  A K+ ++MQ   + P+  T+ + I+GLC NG + EA+ +   + 
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +  + TYN LING CK   LK A ++   +  +G  P+V+T +T+I    K G+MD
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A  L   M      P+  T+  L+ GF +     +   L  +M    L  +DL   + +
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL-KADLVTYNIL 480

Query: 582 VDLLSKDKKYRECL 595
           VD L K  + R+ +
Sbjct: 481 VDALCKKGETRKAV 494



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 16/232 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+   D M  M   P + ++  L+    K K       +   +   GL P++   N L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K G    AF++   +L +   PN  T+N LI G C EG + EA +L K++     
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             ++VT+N L++ LC+   T  A++L +EM        + ++VTYN +I G C  G +++
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEE 530

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           A  LL +M ++ + PN  TY+                 L  EMM+ G  PD+
Sbjct: 531 ANRLLNEMLEKGLIPNRTTYD----------------ILRDEMMEKGFIPDI 566



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 93/191 (48%), Gaps = 14/191 (7%)

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           R +L    + +  + +T+   L  +G+ G A         N ++ D   +A Y+    KN
Sbjct: 127 RALLDSFAKNAHYSNSTIFHSLSVLGSWGCA---------NSIIVDMLVWA-YV----KN 172

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G +  A++ F    +    L   + N ++  L K GR+     ++  +  +    +VVT 
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
             +I+ LCK G+  KA D++ DM+A    PS +T+ T++ G+ +  K  K   LL +M A
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA 292

Query: 568 EKLVVSDLSLS 578
           +++  ++++ +
Sbjct: 293 KRIHPNEITFN 303


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 257/512 (50%), Gaps = 8/512 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMK---PSPGMTSFTILLTMLAKNKQYDT 99
           DG S+         +G+  +N+     D   KM+   PSP   +F++L+   +KN + + 
Sbjct: 332 DGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEK 391

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
            +  +K++ S GL P +F ++ +I    K      A  +      +    N    N +++
Sbjct: 392 ALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFICNTILS 450

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
            LC +G+I +A  L +K+      PNVV++N ++   CR +N  +A  +F  M+ E G  
Sbjct: 451 WLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNML-EKG-- 507

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
            KP+  TY+ +IDG  K+       E++ QM   NI  N + Y ++I G C V    +A+
Sbjct: 508 LKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 567

Query: 280 CLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
            L   M++        +++N++I+   K+G+MD      E M   G++P+ +TY SLMDG
Sbjct: 568 ELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDG 627

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C   R+ +A E+   M +KG + D+ +Y  LI+  CK   +E A  L+ E+L E + PS
Sbjct: 628 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPS 687

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              YN+L+SG   +GN+  AL L  KM  + +  D  T+ T IDGL K G ++ A  ++ 
Sbjct: 688 QPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYT 747

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            ++          Y  ++NGL K G+     K+F  ++     P+V+  + +I    +EG
Sbjct: 748 EMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 807

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
            +D+A  L  +M  K  +P   TF  L+ G V
Sbjct: 808 NLDEAFRLHDEMLDKGILPDGATFDILVSGKV 839



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 245/492 (49%), Gaps = 13/492 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++T ++    K    +  +     + S+G+  ++     LI   CK      A  +
Sbjct: 301 PSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDL 360

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++     +PN+VTF+ LI      G + +A   +KK+      P+V   +T+I G  +
Sbjct: 361 FYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLK 420

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +    ALKLF+E   E G     +V   N+I+  LCK G +DKA ELL +M+ R I PN
Sbjct: 421 GQKHEEALKLFDESF-ETGL---ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPN 476

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V++YN+++   C   +   A+ +F  M++ G++P+  T++ +I+   K+     V  ++ 
Sbjct: 477 VVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVN 536

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-----GCRHDVYSYNILINA 373
            M    +  + V Y ++++G C VG+ S+AREL  +M+ +      C     SYN +I+ 
Sbjct: 537 QMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSC----MSYNSIIDG 592

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             K+ +++ AV  Y EM +  I P+VITY +L+ GL +   +  AL++ D+M+   V  D
Sbjct: 593 FIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLD 652

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
              +   I G CK   +  A  +F  +           YN LI+G   +G +  A  L+ 
Sbjct: 653 IPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYK 712

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           ++   G   D+ T +T+I  L KEG +  A+DL  +M+A   VP E+ +  ++ G  +  
Sbjct: 713 KMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKG 772

Query: 554 KKSKVVVLLHKM 565
           +  KVV +  +M
Sbjct: 773 QFVKVVKMFEEM 784



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 203/405 (50%), Gaps = 14/405 (3%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           +L+ L K  + D    L +++ S G+ P++   N ++   C+      A  V   +L   
Sbjct: 448 ILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKG 507

Query: 147 FTPNTVTFNFLINGLCA---EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
             PN  T++ LI+G      E  ++E        N+   + N V + T+INGLC+   T 
Sbjct: 508 LKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNI---EVNGVVYQTIINGLCKVGQTS 564

Query: 204 VALKLFEEMVNE--FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
            A +L   M+ E  F   C    ++YNSIIDG  K+G +D A     +M    I+PNVIT
Sbjct: 565 KARELLANMIEEKRFCVSC----MSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVIT 620

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y SL+ G C  +   +A  +  EM + GV+ D+  + A+I+  CK   M+  + L   ++
Sbjct: 621 YTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELL 680

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           + G+NP    YNSL+ GF  +G +  A +L+  M+  G R D+ +Y  LI+   K+  + 
Sbjct: 681 EEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLI 740

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A  LY EM +  + P  I Y  +++GL + G     +K+ ++M+ N+V P+   +   I
Sbjct: 741 LASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 800

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            G  + G + EA ++   + +        T++ L++G  K+G+ +
Sbjct: 801 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG--KVGKFQ 843



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/523 (23%), Positives = 240/523 (45%), Gaps = 37/523 (7%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +F  LL   +K++Q D  V +  ++   G+ P +  +N  ++ L +    + A  +  R+
Sbjct: 164 AFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRM 223

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +      +  T   L+     E +  EA  +F +      +P+ + ++  +   C+T N 
Sbjct: 224 VAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNL 283

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            +A  L  EM  +   +C P   TY S+I    K G ++ A     +M    I+ NV+  
Sbjct: 284 AMANSLLREMKEK--KLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAA 341

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            SLI G C  +D   A  LF +M + G  P+ VTF+ +I    K+G+M+K     + M  
Sbjct: 342 TSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMES 401

Query: 323 RGVNPDTVTYNSLMDGF----------------------------------CLVGRISRA 348
            G+ P     ++++ G+                                  C  G+I +A
Sbjct: 402 LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKA 461

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            EL   M S+G   +V SYN ++ A+C+ + ++ A  ++  ML + ++P+  TY+ L+ G
Sbjct: 462 TELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDG 521

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCEL 467
            F+  +  + L+++++M  +++  +   + T I+GLCK G   +A ++    I   +  +
Sbjct: 522 CFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCV 581

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
              +YN +I+G  K G +  A   +  +   G  P+V+T ++++  LCK  +MD+A ++ 
Sbjct: 582 SCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMR 641

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            +M+ K        +  L+ GF + +       L  ++  E L
Sbjct: 642 DEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGL 684



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/515 (22%), Positives = 217/515 (42%), Gaps = 77/515 (14%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N L+N   K   T  A  ++ ++L     P     N  ++ L     I EA  L+ ++
Sbjct: 164 AFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRM 223

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                D +  T   L+    R      AL++F   + E GA  +PD + Y+  +   CK 
Sbjct: 224 VAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAI-ERGA--EPDSLLYSLAVQACCKT 280

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             +  A  LL +MK++ +               CV                   P   T+
Sbjct: 281 LNLAMANSLLREMKEKKL---------------CV-------------------PSQETY 306

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
            ++I  + K G M+   R  + M+  G++ + V   SL+ G C    +  A +LF  M +
Sbjct: 307 TSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMEN 366

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +G   +  ++++LI    K+ ++E A+  Y++M S  + PSV   +T++ G  +     +
Sbjct: 367 EGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEE 426

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           ALKL D+      + + F   T +  LCK G + +A ++ + + +      + +YN ++ 
Sbjct: 427 ALKLFDE-SFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVML 485

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCS----------------------------- 508
             C+   +  A  +F  +  KG  P+  T S                             
Sbjct: 486 AHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEV 545

Query: 509 ------TMIHWLCKEGQMDKANDLLLDM--EAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
                 T+I+ LCK GQ  KA +LL +M  E + CV S +++ +++ GF++  +    V 
Sbjct: 546 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCV-SCMSYNSIIDGFIKEGEMDYAVA 604

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
              +M A  +  + ++ +S ++D L K+ +  + L
Sbjct: 605 AYEEMCANGISPNVITYTS-LMDGLCKNNRMDQAL 638



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 37/311 (11%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G + +   FN ++N   KD + D    ++  M++ GV P     N  +        I+ A
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           +EL+  MV+ G   D  +  +L+ A+ +++K  +A+    E+ S  I             
Sbjct: 217 KELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEAL----EVFSRAIE------------ 260

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK-CEL 467
                                  PDS  ++  +   CK   +  A  + + ++  K C  
Sbjct: 261 -------------------RGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVP 301

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
             ETY  +I    K G ++ A +    +   G   +VV  +++I   CK   +  A DL 
Sbjct: 302 SQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLF 361

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
             ME +   P+ VTF  L+  F +N +  K +    KM +  L  S   + + +   L K
Sbjct: 362 YKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWL-K 420

Query: 588 DKKYRECLNQF 598
            +K+ E L  F
Sbjct: 421 GQKHEEALKLF 431


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 239/489 (48%), Gaps = 10/489 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   F  M +        +++IL+    +  + D  +    ++    +   ++  N L
Sbjct: 209 NEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSL 268

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK+G  S A      ++    TP  VT+  LI+G C EG   +A +++ ++     
Sbjct: 269 INGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGI 328

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN  TF  +I+GLCR      A++LF EM         P  VTYN +I+G C+ G + +
Sbjct: 329 SPNTYTFTAIISGLCRANMMAEAIRLFGEMKER---KIMPSEVTYNVMIEGHCRSGNISE 385

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL +M  +   P+  TY  LI G C V    EAK    ++  +  + + + ++A+++
Sbjct: 386 AFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVH 445

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF---VSMVSKG 359
             CK+G+         +M++RGV  D V Y  L+DG     R    R LF     M + G
Sbjct: 446 GYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDG---TAREHDTRALFGLLKEMHNHG 502

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            R D   Y  +I+ + K   +++A  L+  M+ E   P+V+TY  L++GL + G +  A 
Sbjct: 503 LRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAE 562

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L  +  ++DV P+  T+  ++D L + G + +AVQ+  A+        + +YN LI G 
Sbjct: 563 LLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTV-SYNILIRGF 621

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C++G+++ A KL H +     +PD +T ST+I+  CK   + +A  L   M  K   P  
Sbjct: 622 CRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDT 681

Query: 540 VTFCTLLRG 548
           + +  L+ G
Sbjct: 682 LAYSFLVHG 690



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 147/578 (25%), Positives = 256/578 (44%), Gaps = 67/578 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+ +  FD ++     P +  ++ ++  L + K ++    +   +  N     + V N+L
Sbjct: 113 NDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVL 172

Query: 123 I----------------NCLCKMGITSGAFVVLGR----------ILRSCFTPNTVTFNF 156
           I                NCL + G+ +      G+          +       N +T++ 
Sbjct: 173 IHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSI 232

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           LI+  C  G +  A     K+   + +  V  +N+LING C+  N   A   F+EM+++ 
Sbjct: 233 LIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKG 292

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
                P VVTY S+I G C +G   KA ++  +M  + I+PN  T+ ++I G C  +   
Sbjct: 293 ---LTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMA 349

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           EA  LF EM +  + P  VT+N MI  +C+ G + +   LL+ M+ +G  PDT TY  L+
Sbjct: 350 EAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLI 409

Query: 337 DGFCLVGRISRARELFVS------------------------------------MVSKGC 360
            G C VGR+S A+E FV                                     MV +G 
Sbjct: 410 SGLCSVGRVSEAKE-FVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGV 468

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D+  Y ILI+   ++        L +EM +  +RP  + Y  ++    + GNL +A  
Sbjct: 469 AMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFG 528

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L D M     +P+  T+   I+GLCK G + +A  + +            TY C ++ L 
Sbjct: 529 LWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLT 588

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G ++ A +L H +  KG +   V+ + +I   C+ G++++A  LL  M   + +P  +
Sbjct: 589 RGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYI 647

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
           T+ T++    + +   + + L H M  + L    L+ S
Sbjct: 648 TYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYS 685



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 227/479 (47%), Gaps = 4/479 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ F D M K      +  +  L+    K          F  +   GL P +     L
Sbjct: 244 DNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSL 303

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C  G    AF V   +     +PNT TF  +I+GLC    + EA RLF ++     
Sbjct: 304 ISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKI 363

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ VT+N +I G CR+ N   A  L +EMV   G    PD  TY  +I GLC  G V +
Sbjct: 364 MPSEVTYNVMIEGHCRSGNISEAFHLLDEMV---GKGFVPDTYTYRPLISGLCSVGRVSE 420

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AKE +  +   +   N + Y++L+ G+C    +K+A      M++ GV  D+V +  +I+
Sbjct: 421 AKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILID 480

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              ++     +  LL+ M   G+ PD V Y +++D     G +  A  L+  MV +GC  
Sbjct: 481 GTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLP 540

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V +Y  LIN  CK   ++ A  L +E L   + P+ ITY   L  L + GN+  A++L 
Sbjct: 541 NVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLH 600

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M L   +  + ++   I G C+ G + EA ++   + +        TY+ +I   CK 
Sbjct: 601 HAM-LKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKR 659

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             L+ A KL+H +  KG  PD +  S ++H  C  G+++KA +L  +M  +    + VT
Sbjct: 660 SNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 237/513 (46%), Gaps = 29/513 (5%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + + + LL  L + ++++ V+ LF  + S  + PD+++ + ++  LC++   + A  +
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR-------------------------- 172
           +  +  +    + V +N LI+GLC   RI EA                            
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAEL 213

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           LFK++       N +T++ LI+  CR      A+   ++M     A  +  V  YNS+I+
Sbjct: 214 LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTK---ASIEFTVYPYNSLIN 270

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G CK G    AK    +M D+ + P V+TY SLI G+C   +W +A  ++ EM   G+ P
Sbjct: 271 GYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISP 330

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +  TF A+I+  C+   M +  RL   M +R + P  VTYN +++G C  G IS A  L 
Sbjct: 331 NTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLL 390

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             MV KG   D Y+Y  LI+  C   +V +A     ++  +  + + + Y+ L+ G  + 
Sbjct: 391 DEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKE 450

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G   DA+     M    V  D   +A  IDG  +         + + + N         Y
Sbjct: 451 GRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIY 510

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
             +I+   K G LK A  L+  +  +G +P+VVT + +I+ LCK G MDKA  L  +   
Sbjct: 511 TNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLV 570

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +  P+ +T+   L    +     K V L H M
Sbjct: 571 SDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM 603



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 157/315 (49%), Gaps = 10/315 (3%)

Query: 24  CSFGRPPNPKT---DLSSHHFK-DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           CS GR    K    DL   H K +    +  ++   K G     +AV     M++   + 
Sbjct: 413 CSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF--KDAVSACRVMVERGVAM 470

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
            +  + IL+   A+      +  L K ++++GL PD  +   +I+   K G    AF + 
Sbjct: 471 DLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLW 530

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             ++     PN VT+  LINGLC  G + +A  L K+  V    PN +T+   ++ L R 
Sbjct: 531 DIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRG 590

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
            N   A++L   M+  F A      V+YN +I G C+ G +++A +LL  M D +I P+ 
Sbjct: 591 GNMEKAVQLHHAMLKGFLAT----TVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDY 646

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           ITY+++I   C   + +EA  L+  M+D G++PD + ++ +++  C  G+++K   L + 
Sbjct: 647 ITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDE 706

Query: 320 MIQRGVNPDTVTYNS 334
           MI+RG+  + VT  S
Sbjct: 707 MIRRGMRSNHVTPKS 721



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 100/217 (46%), Gaps = 9/217 (4%)

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V + + L+N   + ++  D + L+ +++S  ++P +  Y+ ++  L ++ +   A ++I
Sbjct: 95  EVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMI 154

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M+ N        +   I GLCK+  + EA++    I+NC  +  +E      N +   
Sbjct: 155 HWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALE----IKNCLMQKGLEA-----NVVTYY 205

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G+   A  LF  +  KG   + +T S +I   C+ G+MD A   L  M   +   +   +
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            +L+ G+ +    S       +M  + L  + ++ +S
Sbjct: 266 NSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTS 302


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/447 (31%), Positives = 226/447 (50%), Gaps = 5/447 (1%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           ++ GLC EGR+ E   L +      C P  V +N LI+G CR  +    L L  EM  + 
Sbjct: 87  MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETK- 145

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
           G I  P VVTY +II  L + G + K + LL +M+ R ++PNV  YN++I   C      
Sbjct: 146 GII--PTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSAS 203

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  +  +M+ +   PDVVTFN MI   C++G + +  +LL   I+RG+ P+ ++Y  L+
Sbjct: 204 QASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLI 263

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            GFC+ G    A +L V M+ +G   D+ +   LI+      +V DA+ +  +M   ++ 
Sbjct: 264 HGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVM 323

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P    YN L+SGL +   L  A  L+++M    V PD F + T IDG  ++  + +A ++
Sbjct: 324 PDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKI 383

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F+ +    C   I  YN +I G CK G +K A      ++  G IPD  T +T++    K
Sbjct: 384 FEFMEEKACP-DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAK 442

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +G +  +  LL DM  + C P+  T+ +L+ G+           L  KM +E L  + + 
Sbjct: 443 KGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVH 502

Query: 577 LSSKVVDLLSKDKKYRECLNQFRHLLF 603
            +  +  L  KDK   +    F H+L 
Sbjct: 503 YTVLIGSLFKKDKVI-QAAAYFEHMLL 528



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 226/442 (51%), Gaps = 4/442 (0%)

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
             G  P     N+LI+  C+ G      ++LG +      P  VT+  +I+ L  +G + 
Sbjct: 109 GEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLT 168

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +   L  ++      PNV  +NT+IN LC+ R+   A  +  +MV    +   PDVVT+N
Sbjct: 169 KVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVK---SRFNPDVVTFN 225

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++I G C++G V +A +LL +   R + PN ++Y  LI GFC   +   A  L +EMM  
Sbjct: 226 TMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGR 285

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G  PD++T  A+I+     G+++    + E M +R V PD   YN L+ G C    +S A
Sbjct: 286 GHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAA 345

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           + L   M+ +  + D + Y  LI+   +  K+ DA  ++ E + E+  P ++ YN ++ G
Sbjct: 346 KNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF-EFMEEKACPDIVAYNVMIKG 404

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
             + G + +A+  +  M+    +PD FT+ T +DG  K G +  ++++   +   +C+  
Sbjct: 405 YCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPN 464

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           I TY  LI G C +G   +A  LF ++Q +G  P+VV  + +I  L K+ ++ +A     
Sbjct: 465 IFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFE 524

Query: 529 DMEAKNCVPSEVTFCTLLRGFV 550
            M   +C P++ T   L+ G V
Sbjct: 525 HMLLNHCPPNDATVHYLVNGLV 546



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 238/494 (48%), Gaps = 19/494 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  ++  L +      V SL   + + GL P++ + N +IN LCK    S A  +
Sbjct: 149 PTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDM 208

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L ++++S F P+ VTFN +I G C EG + EA +L ++      +PN +++  LI+G C 
Sbjct: 209 LNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCV 268

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
               +VA  L  EM+   G    PD++T  ++I GL   G V+ A  +  +M +R + P+
Sbjct: 269 RGEAMVASDLLVEMM---GRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPD 325

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              YN LI G C       AK L  EM++  VQPD   +  +I+   +  K+    ++ E
Sbjct: 326 ANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFE 385

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M ++   PD V YN ++ G+C  G +  A     SM   GC  D ++Y  L++   K  
Sbjct: 386 FMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKG 444

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +  ++ L  +M+  R +P++ TY +L+ G   +G+   A  L  KMQ   + P+   + 
Sbjct: 445 DISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYT 504

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL--CKMGRL----------- 485
             I  L K   V++A   F+ +    C     T + L+NGL  C+ G +           
Sbjct: 505 VLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAH 564

Query: 486 -KTA-CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            K+A   +F  L   G  P +   + +I  LC+   + KA DL   M  K C+P  +TF 
Sbjct: 565 EKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFL 624

Query: 544 TLLRGFVQNNKKSK 557
           +LL GF    +  K
Sbjct: 625 SLLYGFSSAGESGK 638



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 211/473 (44%), Gaps = 36/473 (7%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           ++++A    + M+K + +P + +F  ++    +       + L +     GL P+     
Sbjct: 201 SASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYT 260

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
            LI+  C  G    A  +L  ++    TP+ +T   LI+GL   G++ +A  + +K+   
Sbjct: 261 PLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAER 320

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+   +N LI+GLC+ R    A  L EEM+ +     +PD   Y ++IDG  +   +
Sbjct: 321 QVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQ---KVQPDKFIYTTLIDGFVRSDKL 377

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
             A+++   M+++   P+++ YN +I G+C     KEA      M   G  PD  T+  +
Sbjct: 378 SDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTL 436

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           ++   K G +    RLL  M++R   P+  TY SL+ G+C +G    A +LF  M S+G 
Sbjct: 437 VDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGL 496

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV------GN 414
             +V  Y +LI +  K  KV  A   +  ML     P+  T + L++GL          N
Sbjct: 497 FPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSN 556

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
             D  +  +K  L DV            GL  +G                 + RI  YN 
Sbjct: 557 RSDTKQAHEKSALLDV----------FRGLISDGL----------------DPRISAYNA 590

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           +I  LC+   L  A  L  ++ +KG +PD +T  ++++     G+  K    L
Sbjct: 591 IIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSAL 643



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 149/315 (47%), Gaps = 1/315 (0%)

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           +G  PD    N ++    +  + ++   L   M+ R    D  +   ++ G CL GR+  
Sbjct: 40  HGALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEE 99

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
            R L  +   +GC      YN+LI+  C+   +   + L  EM ++ I P+V+TY  ++ 
Sbjct: 100 GRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIH 159

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
            L + G+L     L+ +M+   + P+   + T I+ LCK     +A  +   +   +   
Sbjct: 160 WLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNP 219

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + T+N +I G C+ G ++ A KL      +G  P+ ++ + +IH  C  G+   A+DLL
Sbjct: 220 DVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLL 279

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           ++M  +   P  +T   L+ G V + + +  +++  KM AE+ V+ D ++ + ++  L K
Sbjct: 280 VEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKM-AERQVMPDANIYNVLISGLCK 338

Query: 588 DKKYRECLNQFRHLL 602
            +      N    +L
Sbjct: 339 KRMLSAAKNLLEEML 353



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 24/244 (9%)

Query: 23  WCSFGRPPNPKTDLSSHH----FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS 78
           +C FG      T +SS        D  +    ++   K G+I++  ++     M+K +  
Sbjct: 405 YCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISA--SLRLLCDMMKRRCK 462

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L+          +   LF ++ S GLFP++    +LI  L K      A   
Sbjct: 463 PNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAY 522

Query: 139 LGRILRSCFTPNTVTFNFLINGL--CAEGRI-------MEAARLFKKLNVF------ACD 183
              +L +   PN  T ++L+NGL  C  G +        +A      L+VF        D
Sbjct: 523 FEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLD 582

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P +  +N +I  LCR      A+ L ++M N+    C PD +T+ S++ G    G   K 
Sbjct: 583 PRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKG---CLPDPITFLSLLYGFSSAGESGKW 639

Query: 244 KELL 247
           +  L
Sbjct: 640 RSAL 643


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/534 (30%), Positives = 273/534 (51%), Gaps = 31/534 (5%)

Query: 36  LSSHHFKD------GTSIAKFLNDRHKSGNITSNEAVYFFDCMIK-MKPSPGMTSFTILL 88
           LS  H+ +       T  A FL+    +G + S   + FF    K  + S G+   + +L
Sbjct: 27  LSKQHWSELKPHLRVTKPATFLDQLLNAG-VDSELVLRFFKWSQKEYRLSYGLEPTSKVL 85

Query: 89  TMLAKNKQYD---------------TVVSLFKRLNSNGLFPDL--FVLNLLINCLCKMGI 131
             LA +K+Y                TV S+F  L  +G  P     ++++L+    K   
Sbjct: 86  HFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLE 145

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A+    R     F  +  + N L++ L  E +I +   ++K++       N+ TFN 
Sbjct: 146 LHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNI 205

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK---AKELLL 248
            INGLCR      A    E+M   +G    P+VVTYN+++DG CK G   K   A+  + 
Sbjct: 206 FINGLCRAGKLNKAEDAIEDM-KAWG--ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M    I PN +T+N+LI GFC  ++   AK  F EM   G++P++VT+N++IN  C +G
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           K+++   L + M+  G+ P+ VTYN+L++GFC    +  A ++F  +  +    +V ++N
Sbjct: 323 KLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFN 382

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            +I+A CK+  +E+   L   ML E I P+V TYN L++GL +  +L  A +L+++M+  
Sbjct: 383 TMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            +  D  T+   IDGLCKN     A ++   + N   +    TYN L++G C  G+LK A
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAA 502

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             +  R++ +   P+VVT + +I   CK  +++ AN LL +M  K   P+  T+
Sbjct: 503 LNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 196/368 (53%), Gaps = 10/368 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAK----NKQYDTVVSLFK 105
           F+N   ++G +  N+A    + M     SP + ++  L+    K     K Y    +  K
Sbjct: 206 FINGLCRAGKL--NKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY-KAEAFMK 262

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            + +N + P+    N LI+  CK    + A      + +    PN VT+N LINGLC  G
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           ++ EA  L+ K+      PN+VT+N LING C+ +    A K+F+++  +      P+V+
Sbjct: 323 KLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE---LVPNVI 379

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           T+N++ID  CK+G +++   L   M D  I PNV TYN LI G C   D + AK L  EM
Sbjct: 380 TFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEM 439

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
            + G++ DVVT+N +I+  CK+ K     +LL  M   G+ P+ VTYN+LMDG+C+ G++
Sbjct: 440 ENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKL 499

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A  +   M  +  + +V +YN+LI   CK  K+E A  L  EML + + P+  TY+ +
Sbjct: 500 KAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559

Query: 406 LSGLFQVG 413
              + + G
Sbjct: 560 RLEMLEKG 567



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 202/386 (52%), Gaps = 6/386 (1%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           Y +  MIK +    + +F I +  L +  + +      + + + G+ P++   N L++  
Sbjct: 186 YVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGY 245

Query: 127 CKMGITSGAF---VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           CK G     +     +  +L +   PN VTFN LI+G C +  +  A + F+++      
Sbjct: 246 CKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+VT+N+LINGLC       A+ L+++MV   G   KP++VTYN++I+G CK   + +A
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMV---GLGLKPNIVTYNALINGFCKKKMMKEA 362

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ++   +  + + PNVIT+N++I  +C     +E   L   M+D G+ P+V T+N +I  
Sbjct: 363 TKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAG 422

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+   +     LL  M  +G+  D VTYN L+DG C   +   A +L   M + G + +
Sbjct: 423 LCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPN 482

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN L++  C + K++ A+ +   M  ER +P+V+TYN L+ G  ++  L  A  L++
Sbjct: 483 HVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLN 542

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGF 449
           +M    + P+  T+      + + GF
Sbjct: 543 EMLEKGLNPNRTTYDIVRLEMLEKGF 568



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 189/378 (50%), Gaps = 18/378 (4%)

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
           +  K +  T +S+   L  DG    A  L++ M        V+ Y   +   C  + +  
Sbjct: 103 SFVKNEKHTVSSVFHSLLLDGGRPGATALIIDML-------VLAYVKNLELHCAYEAFTR 155

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           AK       D G +  + + N +++   K+ K+  V  + + MI+R ++ +  T+N  ++
Sbjct: 156 AK-------DYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ---KVEDAVCLYREMLSER 394
           G C  G++++A +    M + G   +V +YN L++  CK     K+  A    +EML+ +
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I P+ +T+NTL+ G  +  N+  A K  ++MQ   + P+  T+ + I+GLC NG + EA+
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            ++  +     +  I TYN LING CK   +K A K+F  +  +  +P+V+T +TMI   
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           CKEG M++   L   M  +  +P+  T+  L+ G  +         LL++M  + L   D
Sbjct: 389 CKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL-KGD 447

Query: 575 LSLSSKVVDLLSKDKKYR 592
           +   + ++D L K+ K R
Sbjct: 448 VVTYNILIDGLCKNDKSR 465


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 249/504 (49%), Gaps = 3/504 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            F  +I+  P P   +F+ ++    +        SL   +      P+ F  N++IN  C
Sbjct: 43  LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 102

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
             G TS A      ++     P  VTFN +IN  C EG ++EA +LF  L      PN +
Sbjct: 103 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAI 162

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            +NTL+NG  + R    A  L+EEM  +  A   PD +T+N ++ G  K G  +    LL
Sbjct: 163 MYNTLMNGYVKMREIDQANMLYEEMRKKGIA---PDGITFNILVSGHYKYGREEDGDRLL 219

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             +    + P+   ++  + G C      EA    ++M++ G+ P ++ FN++I    + 
Sbjct: 220 KDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQA 279

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G  DK     +LM+  G+ P   T +SL+ G  + GR+  A EL   M+ KG   +  ++
Sbjct: 280 GLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAF 339

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
            +L++   K   V  A  L+ EM    I P V+ ++  + GL + G + +A  +  +M  
Sbjct: 340 TVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLR 399

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             ++P++F + + I G CK G + EA+++ + +R+      I T N +I GLCK GR+++
Sbjct: 400 KGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRS 459

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A  +F  +   G  PD++T +T+I+  CK   M  A++L+  M A    P   T+   + 
Sbjct: 460 AINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIH 519

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLV 571
           GF  + + ++ V++L ++ +  ++
Sbjct: 520 GFCSSRRMNRAVLMLDELVSAGIL 543



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 237/485 (48%), Gaps = 38/485 (7%)

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
            + +  R+   G+ P    + +L   L ++G     + +   ++R    P   TF+ +I 
Sbjct: 5   ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 64

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
           G C +G I     L   +  F C+PN   +N +IN  C    T  AL  F  M+ E G  
Sbjct: 65  GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMI-ERG-- 121

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C P VVT+N++I+  CK+G V +A++L   +K+   +PN I YN+L+ G+  + +  +A 
Sbjct: 122 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 181

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L+ EM   G+ PD +TFN +++ + K G+ +  +RLL+ +   G+ PD   ++  + G 
Sbjct: 182 MLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGL 241

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  GR+  A E  + M+ KG    + ++N +I A  +    + A   Y+ M+   + PS 
Sbjct: 242 CWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 301

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKM--------------------QLNDVV-------- 431
            T ++LL GL   G L +A +LI +M                    +  DVV        
Sbjct: 302 STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 361

Query: 432 -------PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
                  PD   F+ +IDGL K G V EA  VF  +           YN LI G CK G+
Sbjct: 362 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 421

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           L  A KL   ++H+G +PD+ T + +I  LCK+G+M  A ++ +DM      P  +T+ T
Sbjct: 422 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 481

Query: 545 LLRGF 549
           L+ G+
Sbjct: 482 LINGY 486



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 205/446 (45%), Gaps = 3/446 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +++A+ +F+ MI+   +P + +F  ++    K         LF  L   G  P+  + N 
Sbjct: 107 TSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNT 166

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N   KM     A ++   + +    P+ +TFN L++G    GR  +  RL K ++V  
Sbjct: 167 LMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLG 226

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+   F+  ++GLC       A++   +M+ +      P ++ +NS+I    + G  D
Sbjct: 227 LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKG---LSPSIIAFNSVIAAYSQAGLED 283

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA E    M    + P+  T +SL+ G       +EA  L  +M++ G+  + + F  ++
Sbjct: 284 KAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLL 343

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K G +     L   M +RG+ PD V +++ +DG    G +  A  +F+ M+ KG  
Sbjct: 344 DKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLI 403

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            + ++YN LI   CK  K+ +A+ L + M    + P + T N ++ GL + G +  A+ +
Sbjct: 404 PNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINV 463

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
              M    + PD  T+ T I+G CK   ++ A  +   +        + TYN  I+G C 
Sbjct: 464 FMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCS 523

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTC 507
             R+  A  +   L   G +     C
Sbjct: 524 SRRMNRAVLMLDELVSAGILSFSFAC 549



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 209/465 (44%), Gaps = 39/465 (8%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A  +  ++      P+      L   L R  +     KLF++++      CK    T++
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCK---YTFS 60

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            II G C+ G +   + LL  M   +  PN   YN +I   C      +A   F  M++ 
Sbjct: 61  GIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIER 120

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G  P VVTFN +IN  CK+G + +  +L + + + G +P+ + YN+LM+G+  +  I +A
Sbjct: 121 GCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA 180

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
             L+  M  KG   D  ++NIL++ + K  + ED   L +++    + P    ++  +SG
Sbjct: 181 NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSG 240

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L   G L +A++ +  M    + P    F + I    + G   +A + ++ + +      
Sbjct: 241 LCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 300

Query: 469 IETYNCLINGLCKMGRLKTACK-----------------------------------LFH 493
             T + L+ GL   GRL+ A +                                   L+ 
Sbjct: 301 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 360

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            ++ +G  PDVV  S  I  L K+G +++A ++ L+M  K  +P+   + +L+ GF +  
Sbjct: 361 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG 420

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           K ++ +  L K+   + ++ D+  ++ ++  L K  + R  +N F
Sbjct: 421 KLNEALK-LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVF 464



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 155/314 (49%), Gaps = 3/314 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+ F   M++   SP + +F  ++   ++    D     +K +   GL P     + L
Sbjct: 248 DEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSL 307

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  L   G    A  ++G+++    + N + F  L++     G ++ A  L+ ++     
Sbjct: 308 LMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGI 367

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VV F+  I+GL +      A  +F EM+ + G I  P+   YNS+I G CK G +++
Sbjct: 368 FPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK-GLI--PNNFAYNSLICGFCKCGKLNE 424

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L   M+ R + P++ T N +I G C     + A  +F++M   G+ PD++T+N +IN
Sbjct: 425 ALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLIN 484

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK   M   + L+  M   G NPD  TYN  + GFC   R++RA  +   +VS G   
Sbjct: 485 GYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILS 544

Query: 363 DVYSYNILINANCK 376
             ++    +NA+ K
Sbjct: 545 FSFACPPTLNAHTK 558


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 243/464 (52%), Gaps = 11/464 (2%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P+    ++LI+ LC++G    AF +  ++      P+T T+  LI  LC  G I +A  L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           F ++    C PNV T+  LI+GLCR      A  +  +MV +      P V+TYN++I+G
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR---IFPSVITYNALING 380

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            CKDG V  A ELL  M+ R   PNV T+N L+ G C V    +A  L   M+DNG+ PD
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           +V++N +I+  C++G M+   +LL  M    + PD +T+ ++++ FC  G+   A     
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLG 500

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+ KG   D  +   LI+  CK  K  DA+ +   ++  RI  +  + N +L  L +  
Sbjct: 501 LMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGC 560

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            + + L ++ K+    +VP   T+ T +DGL ++G +  + ++ + ++   C   +  Y 
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYT 620

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +INGLC+ GR++ A KL   +Q  G  P+ VT + M+      G++D+A + +  M  +
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
               ++  + +LL+GFV + K            +E+  VSD++L
Sbjct: 681 GYELNDRIYSSLLQGFVLSQKGID--------NSEESTVSDIAL 716



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 254/532 (47%), Gaps = 39/532 (7%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           ++ LL  LAK          ++R+ ++G    +     ++N LCK G T  A + + +IL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222

Query: 144 RSCF------------------------------------TPNTVTFNFLINGLCAEGRI 167
           +  F                                     PN+V+++ LI+GLC  GR+
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            EA  L  ++    C P+  T+  LI  LC       A  LF+EM+      CKP+V TY
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG---CKPNVHTY 339

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
             +IDGLC+DG +++A  +  +M    I P+VITYN+LI G+C       A  L   M  
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
              +P+V TFN ++   C+ GK  K   LL+ M+  G++PD V+YN L+DG C  G ++ 
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A +L  SM       D  ++  +INA CK  K + A      ML + I    +T  TL+ 
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G+ +VG   DAL +++ +    ++    +    +D L K   V E + +   I       
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + TY  L++GL + G +  + ++   ++  G +P+V   + +I+ LC+ G++++A  LL
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
             M+     P+ VT+  +++G+V N K  + +  +  M      ++D   SS
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 244/464 (52%), Gaps = 5/464 (1%)

Query: 64  EAVYFFDCMIK-MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +A+  FD M K +  +P   S++IL+  L +  + +    L  ++   G  P      +L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  LC  G+   AF +   ++     PN  T+  LI+GLC +G+I EA  + +K+     
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V+T+N LING C+    + A +L   M       CKP+V T+N +++GLC+ G   K
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKR---ACKPNVRTFNELMEGLCRVGKPYK 424

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL +M D  ++P++++YN LI G C       A  L   M    ++PD +TF A+IN
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK GK D  +  L LM+++G++ D VT  +L+DG C VG+   A  +  ++V      
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
             +S N++++   K  KV++ + +  ++    + PSV+TY TL+ GL + G++  + +++
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M+L+  +P+ + +   I+GLC+ G V EA ++  A+++        TY  ++ G    
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664

Query: 483 GRLKTACKLFHRLQHKG-PIPDVVTCSTMIHWLCKEGQMDKAND 525
           G+L  A +    +  +G  + D +  S +  ++  +  +D + +
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 207/372 (55%), Gaps = 4/372 (1%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           ++ Y +I++ LCK+G+ + A+  + ++       +     SL+ GFC   + ++A  +F 
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF- 253

Query: 284 EMMDNGV--QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           ++M   V   P+ V+++ +I+  C+ G++++   L + M ++G  P T TY  L+   C 
Sbjct: 254 DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD 313

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G I +A  LF  M+ +GC+ +V++Y +LI+  C+D K+E+A  + R+M+ +RI PSVIT
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVIT 373

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN L++G  + G +  A +L+  M+     P+  TF   ++GLC+ G   +AV + + + 
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +      I +YN LI+GLC+ G + TA KL   +      PD +T + +I+  CK+G+ D
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A+  L  M  K     EVT  TL+ G  +  K    + +L  +   +++ +  SL+  +
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV-I 552

Query: 582 VDLLSKDKKYRE 593
           +D+LSK  K +E
Sbjct: 553 LDMLSKGCKVKE 564



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 165/370 (44%), Gaps = 28/370 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A++  + ++KM+      S  ++L ML+K  +    +++  ++N  GL P +     
Sbjct: 527 TRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTT 586

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++ L + G  +G+F +L  +  S   PN   +  +INGLC  GR+ EA +L   +    
Sbjct: 587 LVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG--LCKDGF 239
             PN VT+  ++ G         AL+    MV E G      +  Y+S++ G  L + G 
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMV-ERGYELNDRI--YSSLLQGFVLSQKGI 703

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
            +  +  +  +  R  +P  I  N LI     +       C+F                 
Sbjct: 704 DNSEESTVSDIALRETDPECI--NELISVVEQLGGCISGLCIF----------------- 744

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           ++   CK+G+ D+ N L++ +++RGV  +    + +M+ +C   + ++  EL   ++  G
Sbjct: 745 LVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSG 803

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSER---IRPSVITYNTLLSGLFQVGNLG 416
                 S+ ++I    K+   E A  L  E+L+      +  V+TY   L    + G+  
Sbjct: 804 FVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCS 863

Query: 417 DALKLIDKMQ 426
           + + L+D++ 
Sbjct: 864 EVIDLVDQLH 873


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 249/490 (50%), Gaps = 5/490 (1%)

Query: 76  KPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
           K +P  + F +L+ +  +       +  F+ +   G  P ++  N+L+  L K       
Sbjct: 95  KSNP--SVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAV 152

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
           ++    +L     P+  TFN LIN LC EG++ +A  L KK+      P+VVT+NT++N 
Sbjct: 153 WLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNW 212

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            C+      AL+L ++M ++     + D  TYN ++D LCK+    K   LL +M+ R I
Sbjct: 213 YCKKGRYKAALELIDQMGSKG---IEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMI 269

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           +PN ITYNS+I GF        A  +F EM    + P+ VT+NA+I+ +C DG  ++   
Sbjct: 270 SPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALT 329

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           +LE+M   G  P+ V+Y++L++G C   +   ++ +   M   G      +Y  +I+  C
Sbjct: 330 ILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLC 389

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           ++  + ++V L  +ML + + P V+T++ L++G  +VG + +  ++I KM    + P+S 
Sbjct: 390 RNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSI 449

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
            + T I   CK G V+EA +V+ A+     +      N L++ LCK G++  A   FH +
Sbjct: 450 IYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHM 509

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G +P+ +T   +I+     G   KA  +  +M      PS  T+  LL+   +  K 
Sbjct: 510 SKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKF 569

Query: 556 SKVVVLLHKM 565
            +   LL K+
Sbjct: 570 KEAKRLLDKL 579



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 253/508 (49%), Gaps = 4/508 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A Y    M +    P + ++  +L    K  +Y   + L  ++ S G+  D    N+L+
Sbjct: 186 KAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLV 245

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK   ++  +++L ++ +   +PN +T+N +ING   EG+I  A R+F+++++    
Sbjct: 246 DDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLL 305

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VT+N LI+G C   N   AL + E M+   G   KP+ V+Y+++++GLC+    + +
Sbjct: 306 PNCVTYNALIDGHCHDGNFEQALTILE-MMEATGP--KPNEVSYSALLNGLCRHAKFELS 362

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K +L +M+   +    I Y ++I G C      E+  L  +M+ +GV PDVVTF+ +IN 
Sbjct: 363 KSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLING 422

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ GK+  V  ++  M + G+ P+++ Y +L+  +C  G +  A +++V+M   G   +
Sbjct: 423 FCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDAN 482

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            +  N+L+++ CKD KV  A   +  M      P+ IT++ +++G    GN   A  + D
Sbjct: 483 CFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFD 542

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M      P  FT+   +  LC+ G   EA ++   +      +   TYN ++    K G
Sbjct: 543 EMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSG 602

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTF 542
            L  A  LF  +  +  +PD  T + +   L + G+M  A     ++  K  V P +V +
Sbjct: 603 MLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMY 662

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            T + G  +  +    +     M    L
Sbjct: 663 TTFVDGLFRAGQSKAALYFCEDMEKNGL 690



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 243/498 (48%), Gaps = 10/498 (2%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF  M+  +  P +++F IL+ +L    +      L K++  +G  P +   N ++N  C
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    A  ++ ++       +  T+N L++ LC   R  +   L KK+      PN +
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 188 TFNTLINGLCRTRNTLVALKLFEE--MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           T+N++ING  +      A ++F+E  M+N       P+ VTYN++IDG C DG  ++A  
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLL-----PNCVTYNALIDGHCHDGNFEQALT 329

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           +L  M+     PN ++Y++L+ G C    ++ +K +   M  NG+    + + AMI+  C
Sbjct: 330 ILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLC 389

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           ++G +++  +LL+ M++ GV PD VT++ L++GFC VG+I   +E+   M   G   +  
Sbjct: 390 RNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSI 449

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            Y  LI   CK   V +A  +Y  M       +    N L+S L + G +G A      M
Sbjct: 450 IYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHM 509

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
                VP+S TF   I+G   +G  L+A  +F  +          TY  L+  LC+ G+ 
Sbjct: 510 SKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKF 569

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           K A +L  +L +     D VT +T++    K G +  A  L  +M  +N +P   T+  +
Sbjct: 570 KEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAII 629

Query: 546 LRGFVQNNKKSKVVVLLH 563
             G +   ++ K+V  LH
Sbjct: 630 FAGLI---RRGKMVAALH 644



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 241/473 (50%), Gaps = 31/473 (6%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTM----LAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           A+ F + +I+ +P   +   T +L++    L + + Y+   S+ K L+  G+     V  
Sbjct: 28  ALKFLNWVIQ-QPGLELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSK-SVFG 85

Query: 121 LLINC--LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            L+N   LCK                     N   F+ LI     EG + +A   F+ + 
Sbjct: 86  ALMNTYPLCK--------------------SNPSVFDLLIRVYLREGMVGDALETFRLMG 125

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
           +   +P+V T N L+  L + R        F+EM+     +C PDV T+N +I+ LC +G
Sbjct: 126 IRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLAR--RVC-PDVSTFNILINVLCVEG 182

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            + KA  LL +M++    P+V+TYN+++  +C    +K A  L  +M   G++ D  T+N
Sbjct: 183 KLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYN 242

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +++  CK+ +  K   LL+ M +R ++P+ +TYNS+++GF   G+I  A  +F  M   
Sbjct: 243 MLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSML 302

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
               +  +YN LI+ +C D   E A+ +   M +   +P+ ++Y+ LL+GL +      +
Sbjct: 303 NLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELS 362

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             ++++M++N ++     +   IDGLC+NG + E+V++   +        + T++ LING
Sbjct: 363 KSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLING 422

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
            C++G++K   ++  ++   G  P+ +  +T+I+  CK G + +A  + + M 
Sbjct: 423 FCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMS 475



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 244/533 (45%), Gaps = 8/533 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   + M    P P   S++ LL  L ++ +++   S+ +R+  NG+         +I
Sbjct: 326 QALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMI 385

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC+ G+ + +  +L ++L+    P+ VTF+ LING C  G+I     +  K+      
Sbjct: 386 DGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLA 445

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           PN + + TLI   C+T + + A K++  M    + A C       N ++  LCKDG V  
Sbjct: 446 PNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANC----FICNVLVSSLCKDGKVGV 501

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+     M      PN IT++ +I G+    +  +A  +F EM+  G  P   T+  ++ 
Sbjct: 502 AEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLK 561

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ GK  +  RLL+ +       DTVTYN+++      G ++ A  LF  MV +    
Sbjct: 562 ALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLP 621

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKL 421
           D Y+Y I+     +  K+  A+  Y  +L +  + P  + Y T + GLF+ G    AL  
Sbjct: 622 DSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYF 681

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETYNCLINGLC 480
            + M+ N +  D       ++G  + G + +A  +F  +         + TYN L++G  
Sbjct: 682 CEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYA 741

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K   L     L++ +   G  PD +TC ++I   CK   +D    LL  M        + 
Sbjct: 742 KKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQC 801

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           TF  L+  + + ++  K   L++ M     +  D++    ++ +LS+    +E
Sbjct: 802 TFNMLIMKYCETDEVGKAFDLVNIMNLFD-IFPDMTTHDSIISVLSRVSTVQE 853



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/511 (23%), Positives = 227/511 (44%), Gaps = 44/511 (8%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K G I +  A   F  M  +   P   ++  L+     +  ++  +++ + + +
Sbjct: 279 IINGFVKEGKIGA--ATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEA 336

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G  P+    + L+N LC+      +  +L R+  +      + +  +I+GLC  G + E
Sbjct: 337 TGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNE 396

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           + +L  K+      P+VVTF+ LING CR                               
Sbjct: 397 SVKLLDKMLKDGVVPDVVTFSVLINGFCRV------------------------------ 426

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
                   G +   KE++ +M    + PN I Y +LI  +C   D  EA  +++ M   G
Sbjct: 427 --------GKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIG 478

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
              +    N +++  CKDGK+         M + G  P+++T++ +++G+   G   +A 
Sbjct: 479 YDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAF 538

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            +F  M+  G     ++Y  L+ A C+  K ++A  L  ++         +TYNT+L   
Sbjct: 539 SMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVET 598

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
           F+ G L DA+ L D+M   +V+PDS+T+A    GL + G ++ A+  +  +   K  +  
Sbjct: 599 FKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLG-KGAVSP 657

Query: 470 E--TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           E   Y   ++GL + G+ K A      ++  G   D++  + +++   + G+M KA D+ 
Sbjct: 658 EKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIF 717

Query: 528 LDMEAKNCV-PSEVTFCTLLRGFVQNNKKSK 557
             M +   + PS  T+  LL G+ +    SK
Sbjct: 718 TMMWSGITISPSLATYNILLHGYAKKKNLSK 748



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 236/546 (43%), Gaps = 40/546 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NE+V   D M+K    P + +F++L+    +  +   V  +  ++   GL P+  +   L
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTL 454

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   CK G    AF V   + R  +  N    N L++ LC +G++  A   F  ++    
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGN 514

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +TF+ +ING   + N L A  +F+EM+    A   P   TY  ++  LC+ G   +
Sbjct: 515 VPNSITFDCIINGYGNSGNGLKAFSMFDEMIK---AGHHPSHFTYGGLLKALCRAGKFKE 571

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK LL ++       + +TYN+++          +A  LF EM+   V PD  T+  +  
Sbjct: 572 AKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFA 631

Query: 303 YNCKDGKMDKVNRLLELMIQRG-VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              + GKM         ++ +G V+P+ V Y + +DG    G+   A      M   G  
Sbjct: 632 GLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLC 691

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALK 420
            D+ + N+++N   +  K+  A  ++  M S   I PS+ TYN LL G  +  NL     
Sbjct: 692 ADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSN 751

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFV-----------LEAVQVFQAIRNC----KC 465
           L + M    + PD  T  + I G CK+  +           L+ V V Q   N      C
Sbjct: 752 LYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYC 811

Query: 466 EL--------------------RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           E                      + T++ +I+ L ++  ++ +  L H +  +G IPD  
Sbjct: 812 ETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRR 871

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
               +++ +C+ G +  A  L  +MEA      +V    L+RG  +  K  +  ++L  M
Sbjct: 872 QYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFM 931

Query: 566 AAEKLV 571
             + L+
Sbjct: 932 LRKSLI 937



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 234/536 (43%), Gaps = 45/536 (8%)

Query: 50   FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
             +N    SGN    +A   FD MIK    P   ++  LL  L +  ++     L  +L+ 
Sbjct: 524  IINGYGNSGN--GLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHY 581

Query: 110  NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
                 D    N ++    K G+ + A  +   +++    P++ T+  +  GL   G+++ 
Sbjct: 582  IPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVA 641

Query: 170  AARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
            A   +  L    A  P  V + T ++GL R   +  AL   E+M  E   +C  D++  N
Sbjct: 642  ALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDM--EKNGLC-ADLIATN 698

Query: 229  SIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
             I++G  + G + KA ++   M     I+P++ TYN L+ G+    +  +   L+  MM 
Sbjct: 699  VILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMR 758

Query: 288  NGVQPDVVT-----------------------------------FNAMINYNCKDGKMDK 312
             G+ PD +T                                   FN +I   C+  ++ K
Sbjct: 759  TGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGK 818

Query: 313  VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
               L+ +M    + PD  T++S++     V  +  +  L   M+ +GC  D   Y  L+N
Sbjct: 819  AFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVN 878

Query: 373  ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
              C+   +  A  L  EM +  I    +  + L+ GL + G + +A  ++D M    ++P
Sbjct: 879  RMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIP 938

Query: 433  DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
               TF T +   C+N  ++EA+++   +  C  +L +  YN LI+GLC  G + +A KL+
Sbjct: 939  TIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLY 998

Query: 493  HRLQHKGPIPDVVTCSTMIHWL-CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
              ++ +G  P++ T   +I  +   +  + K   LL D++ +  +     +C  +R
Sbjct: 999  KEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERGVISGH--WCGGIR 1052



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 223/497 (44%), Gaps = 20/497 (4%)

Query: 24   CSFGRPPNPKTDLSSHHF----KDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
            C  G+    K  L   H+     D  +    L +  KSG +T  +AV  FD M++    P
Sbjct: 564  CRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLT--DAVALFDEMVQRNVLP 621

Query: 80   GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG-LFPDLFVLNLLINCLCKMGITSGAFVV 138
               ++ I+   L +  +    +  +  L   G + P+  +    ++ L + G +  A   
Sbjct: 622  DSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYF 681

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLC 197
               + ++    + +  N ++NG    G++ +A  +F  + +     P++ T+N L++G  
Sbjct: 682  CEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYA 741

Query: 198  RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            + +N      L+  M+   G    PD +T +S+I G CK   +D   +LL +M    +  
Sbjct: 742  KKKNLSKCSNLYNIMMRT-GIF--PDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAV 798

Query: 258  NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
            +  T+N LI  +C  D+  +A  L   M    + PD+ T +++I+   +   + + + LL
Sbjct: 799  DQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLL 858

Query: 318  ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
              M++RG  PD   Y +L++  C +G I  A +L   M + G      + + L+    K 
Sbjct: 859  HEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKC 918

Query: 378  QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             KVE+A  +   ML + + P++ T+ TL+    +  +L +ALKL D M   DV  D   +
Sbjct: 919  GKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAY 978

Query: 438  ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG-RLKTACKLFHRLQ 496
               I GLC +G V  A+++++ I+       + TY  LI+ +      L     L   LQ
Sbjct: 979  NVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQ 1038

Query: 497  HKGPIPDVVTCSTMIHW 513
             +G I          HW
Sbjct: 1039 ERGVISG--------HW 1047



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 138/290 (47%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G  P V T N ++    K+ K+  V    + M+ R V PD  T+N L++  C+ G++ +A
Sbjct: 128 GFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKA 187

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
             L   M   G    V +YN ++N  CK  + + A+ L  +M S+ I     TYN L+  
Sbjct: 188 GYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDD 247

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L +         L+ KM+   + P+  T+ + I+G  K G +  A ++FQ +        
Sbjct: 248 LCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPN 307

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
             TYN LI+G C  G  + A  +   ++  GP P+ V+ S +++ LC+  + + +  +L 
Sbjct: 308 CVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILE 367

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            M     +   + +  ++ G  +N   ++ V LL KM  + +V   ++ S
Sbjct: 368 RMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFS 417



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 119/237 (50%)

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G +  A E F  M  +G    VY+ N+L+    K++KV      ++EML+ R+ P V T+
Sbjct: 112 GMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTF 171

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N L++ L   G L  A  L+ KM+ +  VP   T+ T ++  CK G    A+++   + +
Sbjct: 172 NILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGS 231

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              E    TYN L++ LCK  R      L  +++ +   P+ +T +++I+   KEG++  
Sbjct: 232 KGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGA 291

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           A  +  +M   N +P+ VT+  L+ G   +    + + +L  M A     +++S S+
Sbjct: 292 ATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSA 348



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 97/207 (46%)

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C+ +   +++LI    ++  V DA+  +R M      PSV T N LL  L +   +G   
Sbjct: 94  CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVW 153

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
               +M    V PD  TF   I+ LC  G + +A  + + +        + TYN ++N  
Sbjct: 154 LFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWY 213

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK GR K A +L  ++  KG   D  T + ++  LCK  +  K   LL  M  +   P+E
Sbjct: 214 CKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNE 273

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMA 566
           +T+ +++ GFV+  K      +  +M+
Sbjct: 274 ITYNSIINGFVKEGKIGAATRIFQEMS 300


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 221/403 (54%), Gaps = 5/403 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
            +PN +TFN +I  +C  G + +A ++F+ + V  C P+V T+ TL++GLC+      A+
Sbjct: 165 ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAV 224

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            L +EM  +    C P  VT+N +I+GLCK G + +  +L+  M  +   PN +TYN+LI
Sbjct: 225 SLLDEMQIDG---CFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLI 281

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C     ++A  L   M+ +   P+VVT+  +IN   K G+     R+L LM +RG +
Sbjct: 282 HGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYH 341

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            +   Y++L+ G    G+   A +LF  M  K C  +   Y+ +I+  C+D K ++A+ +
Sbjct: 342 VNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEV 401

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             EM + R +P+  TY++L+ G F+ GN   A+++   M  ++   +   ++  I GLCK
Sbjct: 402 LSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCK 461

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL--QHKGPIPDV 504
           +G V EA+ V+  +    C+  +  Y  +INGL   G ++ A +L++ +  Q     PDV
Sbjct: 462 DGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDV 521

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           VT + +++ LCK+  + +A DLL  M  + C P  VT    LR
Sbjct: 522 VTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLR 564



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 224/418 (53%), Gaps = 12/418 (2%)

Query: 65  AVYFFDCMIKMKP---SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           A+ F++ +I  K    SP + +F +++  + K    D  V +F+ +  +   PD++    
Sbjct: 150 ALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCT 209

Query: 122 LINCLCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           L++ LCK      A  +L  + +  CF P+ VTFN LINGLC +G +   A+L   + + 
Sbjct: 210 LMDGLCKADRIDEAVSLLDEMQIDGCF-PSPVTFNVLINGLCKKGDLARVAKLVDNMFLK 268

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            C PN VT+NTLI+GLC       A+ L + MV+   + C P+VVTY +II+GL K G  
Sbjct: 269 GCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVS---SKCVPNVVTYGTIINGLVKQGRA 325

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
                +L  M++R  + N   Y++LI G       +EA  LF EM     + + + ++A+
Sbjct: 326 LDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAV 385

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  C+DGK D+   +L  M      P+  TY+SLM GF   G   +A E++  M     
Sbjct: 386 IDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNF 445

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             +   Y++LI+  CKD KV++A+ ++ +ML +  +P V+ Y ++++GL   G + DAL+
Sbjct: 446 TQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQ 505

Query: 421 LIDKM--QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           L ++M  Q  D  PD  T+   ++ LCK   +  A+ +  ++ +  C+  + T  C+I
Sbjct: 506 LYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVT--CII 561



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 198/382 (51%), Gaps = 1/382 (0%)

Query: 169 EAARLFKKLNV-FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
           +A  LF ++   F C   V +FN+++N + +      AL+ +  ++   G    P+V+T+
Sbjct: 113 KAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTF 172

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N +I  +CK G VD A ++   M      P+V TY +L+ G C  D   EA  L  EM  
Sbjct: 173 NLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI 232

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           +G  P  VTFN +IN  CK G + +V +L++ M  +G  P+ VTYN+L+ G CL G++ +
Sbjct: 233 DGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEK 292

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A  L   MVS  C  +V +Y  +IN   K  +  D   +   M       +   Y+ L+S
Sbjct: 293 AISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALIS 352

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GLF+ G   +A++L  +M + +   ++  ++  IDGLC++G   EA++V   + N +C+ 
Sbjct: 353 GLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKP 412

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
              TY+ L+ G  + G    A +++  +       + V  S +IH LCK+G++ +A  + 
Sbjct: 413 NAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVW 472

Query: 528 LDMEAKNCVPSEVTFCTLLRGF 549
             M  K C P  V + +++ G 
Sbjct: 473 AQMLGKGCKPDVVAYGSMINGL 494



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 225/470 (47%), Gaps = 33/470 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F  M   K  P + ++  L+  L K  + D  VSL   +  +G FP     N+L
Sbjct: 186 DDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVL 245

Query: 123 INCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           IN LCK G +   A +V    L+ C  PN VT+N LI+GLC +G++ +A  L  ++    
Sbjct: 246 INGLCKKGDLARVAKLVDNMFLKGC-APNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK 304

Query: 182 CDPNVVTFNTLINGLCRTRNTLVA---LKLFEE---MVNEFGAICKPDVVTYNSIIDGLC 235
           C PNVVT+ T+INGL +    L     L L EE    VNE+          Y+++I GL 
Sbjct: 305 CVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEY---------VYSALISGLF 355

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G   +A +L  +M  +    N I Y+++I G C      EA  +  EM +N  +P+  
Sbjct: 356 KEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAY 415

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+++++    + G   K   + + M +     + V Y+ L+ G C  G++  A  ++  M
Sbjct: 416 TYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQM 475

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI--RPSVITYNTLLSGLFQVG 413
           + KGC+ DV +Y  +IN       VEDA+ LY EML +    +P V+TYN LL+ L +  
Sbjct: 476 LGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQS 535

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           ++  A+ L++ M      PD  T   ++  L       E +   Q  R        E  +
Sbjct: 536 SISRAIDLLNSMLDRGCDPDLVTCIIFLRTL------REKLDPPQDGR--------EFLD 581

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
            L+  L K  R+  A K+   +  K   P   T + ++  LC   ++  A
Sbjct: 582 GLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAA 631



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 199/433 (45%), Gaps = 38/433 (8%)

Query: 173 LFKKLNVFACDPNVVT---FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           L K L+   C+  VV    F  +     +      A+ LF+ M  EF   CK  V ++NS
Sbjct: 79  LEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFE--CKRTVKSFNS 136

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +++ + ++G   +A E                YN +I           AK +        
Sbjct: 137 VLNVIIQEGLFYRALEF---------------YNHVI----------GAKGV-------N 164

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           + P+V+TFN +I   CK G +D   ++   M      PD  TY +LMDG C   RI  A 
Sbjct: 165 ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAV 224

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            L   M   GC     ++N+LIN  CK   +     L   M  +   P+ +TYNTL+ GL
Sbjct: 225 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGL 284

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
              G L  A+ L+D+M  +  VP+  T+ T I+GL K G  L+  +V   +      +  
Sbjct: 285 CLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNE 344

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
             Y+ LI+GL K G+ + A +LF  +  K    + +  S +I  LC++G+ D+A ++L +
Sbjct: 345 YVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSE 404

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           M    C P+  T+ +L++GF +     K + +   MA      +++  S  ++  L KD 
Sbjct: 405 MTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSV-LIHGLCKDG 463

Query: 590 KYRECLNQFRHLL 602
           K +E +  +  +L
Sbjct: 464 KVKEAMMVWAQML 476



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 10/248 (4%)

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS---YNILINANCKDQKVEDAVCLY 387
           T+ SL+D +  +G      ++   M    C   V     + ++  A  K    E AV L+
Sbjct: 62  TFYSLIDNYANLGDFKSLEKVLDRM---RCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLF 118

Query: 388 REMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLIDKM---QLNDVVPDSFTFATYIDG 443
             M  E   + +V ++N++L+ + Q G    AL+  + +   +  ++ P+  TF   I  
Sbjct: 119 DRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKT 178

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           +CK G V +AVQ+F+ +   KC+  + TY  L++GLCK  R+  A  L   +Q  G  P 
Sbjct: 179 MCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPS 238

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            VT + +I+ LCK+G + +   L+ +M  K C P+EVT+ TL+ G     K  K + LL 
Sbjct: 239 PVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLD 298

Query: 564 KMAAEKLV 571
           +M + K V
Sbjct: 299 RMVSSKCV 306



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 142/290 (48%), Gaps = 21/290 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S EA+  F  M   +       ++ ++  L ++ + D  + +   + +N   P+ +  + 
Sbjct: 360 SQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSS 419

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+    + G    A  +   + +  FT N V ++ LI+GLC +G++ EA  ++ ++    
Sbjct: 420 LMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKG 479

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P+VV + ++INGL        AL+L+ EM+ +     +PDVVTYN +++ LCK   + 
Sbjct: 480 CKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQ-EPDSQPDVVTYNILLNALCKQSSIS 538

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP--DVVTF-N 298
           +A +LL  M DR  +P+++T         C+        +F+  +   + P  D   F +
Sbjct: 539 RAIDLLNSMLDRGCDPDLVT---------CI--------IFLRTLREKLDPPQDGREFLD 581

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
            ++    K  ++   ++++E+M+Q+ + P   T+  +++  C   ++  A
Sbjct: 582 GLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAA 631


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/433 (32%), Positives = 228/433 (52%), Gaps = 11/433 (2%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V   I  S    N  T   LI+GLC + R+ +A    ++       P+VV+FN L++G C
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  +  VA   F  M+ ++G +  PDV +YN ++ GLC  G +++A E    M++  + P
Sbjct: 282 KMGSVDVAKSFFCMMI-KYGLL--PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEP 338

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +++TYN L  GF  +     A  +   M+ NG+ PD+VT+  +I  +C+ G +++  +L 
Sbjct: 339 DIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLK 398

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M+ +G+    VTY  L+   C  GRI  A  L   M   G + D+ +Y+         
Sbjct: 399 EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------R 450

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             VE+A+ LY EM S+RI P+    + ++SGLF+ G + +A    D +  +DV  +   +
Sbjct: 451 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 510

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              IDG  K G + EAV+ ++ I        I T+N LI G CK G+L  A KL   ++ 
Sbjct: 511 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 570

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            G +P  VT +T+++  C+EG M    D+L +MEAK   P+++T+  +++G  +  +  +
Sbjct: 571 HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 630

Query: 558 VVVLLHKMAAEKL 570
            V LL  M A  L
Sbjct: 631 SVQLLKYMYARGL 643



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 251/505 (49%), Gaps = 11/505 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           + KMK      S     ++L   +  D +  ++  + ++G+  + +   +LI+ LC+   
Sbjct: 191 LAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSR 250

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A   L       F P+ V+FN L++G C  G +  A   F  +  +   P+V ++N 
Sbjct: 251 LQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNI 310

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++GLC   +   AL+   +M N      +PD+VTYN + +G    G +  A +++ +M 
Sbjct: 311 LLHGLCVAGSMEEALEFTNDMENHG---VEPDIVTYNILANGFRILGLISGAWKVVQRML 367

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              +NP+++TY  LICG C + + +E+  L  +M+  G++  +VT+  +++  CK G++D
Sbjct: 368 LNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL  M   G+ PD +TY+         G +  A EL+  M SK    + +  + +I
Sbjct: 428 EAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAII 479

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +   +   + +A   +  +    +   +I YN ++ G  ++GN+G+A++   ++    + 
Sbjct: 480 SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 539

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P   TF + I G CK G + EAV++   I+         TY  L+NG C+ G + +   +
Sbjct: 540 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 599

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            H ++ K   P  +T + ++  LCKEG++ ++  LL  M A+   P ++T+ T+++ F +
Sbjct: 600 LHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCK 659

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLS 576
            +   K   L ++M    L  S ++
Sbjct: 660 AHDLQKAFQLHNQMLQHSLQPSPVT 684



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 236/510 (46%), Gaps = 59/510 (11%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF  MIK    P + S+ ILL  L      +  +     + ++G+ PD+   N+L N   
Sbjct: 292 FFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFR 351

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
            +G+ SGA+ V+ R+L +   P+ VT+  LI G C  G I E+ +L +K+       ++V
Sbjct: 352 ILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411

Query: 188 TFNTLINGLCRT--------------------------RNTLV-ALKLFEEMVNE----- 215
           T+  L++ LC++                          R  +  A++L+EEM ++     
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPN 471

Query: 216 -----------------------FGAICKPDV----VTYNSIIDGLCKDGFVDKAKELLL 248
                                  F ++ K DV    + YN +IDG  K G + +A     
Sbjct: 472 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 531

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           Q+ ++ I+P ++T+NSLI GFC      EA  L   +  +G+ P  VT+  ++N  C++G
Sbjct: 532 QIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEG 591

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            M  +  +L  M  + + P  +TY  ++ G C  GR+  + +L   M ++G   D  +YN
Sbjct: 592 DMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYN 651

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            +I + CK   ++ A  L+ +ML   ++PS +TYN L++GL   GNL DA +L+  +Q  
Sbjct: 652 TVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQ 711

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            +      + T I   C  G V  A+  F  +     E+ I  Y+ +IN LCK   +  A
Sbjct: 712 SIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDA 771

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
              F  +   G  PD   C  M++   + G
Sbjct: 772 KFFFCMMLTHGIPPDQDICLVMLNAFHRSG 801



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 235/480 (48%), Gaps = 36/480 (7%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           N V ++ L         + +A  +  K+ V     ++ T+N+L+  L  T        + 
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHT-------DIM 219

Query: 210 EEMVNEFGAICKPDVVTYNSI-IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            ++ NE  A   P     N I IDGLC+   +  A   L +       P+V+++N+L+ G
Sbjct: 220 WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSG 279

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           FC +     AK  F  M+  G+ PDV ++N +++  C  G M++       M   GV PD
Sbjct: 280 FCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPD 339

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            VTYN L +GF ++G IS A ++   M+  G   D+ +Y ILI  +C+   +E++  L  
Sbjct: 340 IVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKE 399

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL--------------------- 427
           +MLS+ ++ S++TY  LLS L + G + +A+ L+ +M++                     
Sbjct: 400 KMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIEL 459

Query: 428 ------NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
                   + P+SF  +  I GL + G + EA   F ++        I  YN +I+G  K
Sbjct: 460 YEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAK 519

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
           +G +  A + + ++  KG  P +VT +++I+  CK+G++ +A  LL  ++    VP+ VT
Sbjct: 520 LGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVT 579

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + TL+ G+ +      +  +LH+M A+ +  + ++ +  VV  L K+ +  E +   +++
Sbjct: 580 YTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV-VVKGLCKEGRLHESVQLLKYM 638



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 194/408 (47%), Gaps = 13/408 (3%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG I  +EAV     M  +   P + +++            +  + L++ + S  ++P+
Sbjct: 422 KSGRI--DEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPN 471

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            FV + +I+ L + G  S A +    + +S      + +N +I+G    G I EA R +K
Sbjct: 472 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 531

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P +VTFN+LI G C+      A+KL +  +   G +  P  VTY ++++G C
Sbjct: 532 QIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT-IKVHGLV--PTSVTYTTLMNGYC 588

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           ++G +    ++L +M+ + I P  ITY  ++ G C      E+  L   M   G+ PD +
Sbjct: 589 EEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 648

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+N +I   CK   + K  +L   M+Q  + P  VTYN L++G C+ G +  A  L V++
Sbjct: 649 TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTL 708

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +  R    +Y  +I A+C    V++A+  + +M+      S+  Y+ +++ L +   +
Sbjct: 709 QDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLI 768

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            DA      M  + + PD       ++   ++G      ++F  +  C
Sbjct: 769 TDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKC 816



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 143/304 (47%), Gaps = 5/304 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GNI   EAV  +  +I+   SP + +F  L+    K  +    V L   +  +GL P 
Sbjct: 519 KLGNI--GEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 576

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 L+N  C+ G     F +L  +      P  +T+  ++ GLC EGR+ E+ +L K
Sbjct: 577 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 636

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      P+ +T+NT+I   C+  +   A +L  +M+       +P  VTYN +I+GLC
Sbjct: 637 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHS---LQPSPVTYNVLINGLC 693

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
             G +  A  LL+ ++D++I    + Y ++I   C   D + A   F +M++ G +  + 
Sbjct: 694 VYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIR 753

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            ++A+IN  CK   +        +M+  G+ PD      +++ F   G  +   E+F  M
Sbjct: 754 DYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMM 813

Query: 356 VSKG 359
           +  G
Sbjct: 814 IKCG 817



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/455 (22%), Positives = 201/455 (44%), Gaps = 61/455 (13%)

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD----- 252
           R  N+  AL LF+ + NE+G   +   V++  +   + + G   + + +L QM +     
Sbjct: 91  RVDNSDSALFLFDLLRNEYG--FRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSG 148

Query: 253 -------------RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
                        R+ + N + ++ L C +   +   +A  +  +M    +Q  + T+N+
Sbjct: 149 SAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNS 208

Query: 300 MIN-----------YN---------------------CKDGKMDKVNRLLELMIQRGVNP 327
           ++            YN                     C+  ++      L         P
Sbjct: 209 LLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGP 268

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             V++N+LM GFC +G +  A+  F  M+  G   DVYSYNIL++  C    +E+A+   
Sbjct: 269 SVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFT 328

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            +M +  + P ++TYN L +G   +G +  A K++ +M LN + PD  T+   I G C+ 
Sbjct: 329 NDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQM 388

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + E+ ++ + + +   +L I TY  L++ LCK GR+  A  L H ++  G  PD++T 
Sbjct: 389 GNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTY 448

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           S         G +++A +L  +M +K   P+      ++ G  +    S+  +    +  
Sbjct: 449 S--------RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTK 500

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
              V  ++ L + ++D  +K     E +  ++ ++
Sbjct: 501 SD-VAEEIILYNIMIDGYAKLGNIGEAVRSYKQII 534


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 243/452 (53%), Gaps = 4/452 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           NTV+ N +++ LC  G++ EA  L  ++      P+VV++  +++G CR       LKL 
Sbjct: 241 NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLV 300

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           +E+    G   KPD   YN+II  LCK+G V +A++LL  M+   + P+ + Y ++I GF
Sbjct: 301 DELK---GKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGF 357

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C + +   A  LF EM    + PD+VT+ ++I+  CK GKM +   +   M+ +G+ PD 
Sbjct: 358 CKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDE 417

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTY +L+DG+C  G +  A  +   MV KG   +V +Y  L +  CK+ +++ A  L  E
Sbjct: 418 VTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHE 477

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M  + ++P+V TYNT+++GL ++GN+   +KL+++M L    PD+ T+ T +D  CK G 
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGE 537

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + +A ++ + + N + +  + T+N L+NG C  G L+   +L   +  KG +P+  T ++
Sbjct: 538 MAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNS 597

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           ++   C +  M    ++   M  +  +P   T+  L++G  +  +  K    LHK   EK
Sbjct: 598 LMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCK-ARNMKEAWFLHKEMVEK 656

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                 +    ++    K KK+ E    F  +
Sbjct: 657 GYSVTAATYDALIRGFYKRKKFVEARKLFEEM 688



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 230/435 (52%), Gaps = 3/435 (0%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           +L  ++   G FPD+    ++++  C++G       ++  +      P+   +N +I  L
Sbjct: 263 NLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLL 322

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  G ++EA +L + +  +   P+ V + T+I+G C+  N   A KLF+EM  +      
Sbjct: 323 CKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRK---KIV 379

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD+VTY S+I G+CK G + +A+E+  +M  + + P+ +TY +LI G+C   + KEA  +
Sbjct: 380 PDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSV 439

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             +M+  G+ P+VVT+ A+ +  CK+G++D  N LL  M ++G+ P+  TYN++++G C 
Sbjct: 440 HNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCK 499

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           +G I +  +L   M   G   D  +Y  L++A CK  ++  A  L R ML++R++P+++T
Sbjct: 500 IGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVT 559

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +N L++G    G L D  +LI+ M    ++P++ TF + +   C    +    ++++A+ 
Sbjct: 560 FNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMH 619

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +        TYN LI G CK   +K A  L   +  KG      T   +I    K  +  
Sbjct: 620 DRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFV 679

Query: 522 KANDLLLDMEAKNCV 536
           +A  L  +M     V
Sbjct: 680 EARKLFEEMRKHGLV 694



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 216/408 (52%), Gaps = 3/408 (0%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           + D V+ L   L   GL PD ++ N +I  LCK G    A  +L  + +    P+ V + 
Sbjct: 292 ELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYT 351

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            +I+G C  G +  A +LF ++      P++VT+ ++I+G+C++   + A ++F EM+ +
Sbjct: 352 TVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVK 411

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                +PD VTY ++IDG CK G + +A  +  QM  + + PNV+TY +L  G C   + 
Sbjct: 412 G---LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEI 468

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
             A  L  EM   G+QP+V T+N ++N  CK G +++  +L+E M   G  PDT+TY +L
Sbjct: 469 DVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           MD +C +G +++A EL   M++K  +  + ++N+L+N  C    +ED   L   ML + I
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGI 588

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P+  T+N+L+       N+    ++   M    V+PDS T+   I G CK   + EA  
Sbjct: 589 MPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWF 648

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           + + +      +   TY+ LI G  K  +   A KLF  ++  G + +
Sbjct: 649 LHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAE 696



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 211/417 (50%), Gaps = 5/417 (1%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           +KP   + +  ILL  L KN +      L + +   G+FPD  V   +I+  CK+G  S 
Sbjct: 308 LKPDEYIYNNIILL--LCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSA 365

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  +   + R    P+ VT+  +I+G+C  G+++EA  +F ++ V   +P+ VT+  LI+
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID 425

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G C+      A  +  +MV +      P+VVTY ++ DGLCK+G +D A ELL +M  + 
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQKG---LTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PNV TYN+++ G C + + ++   L  EM   G  PD +T+  +++  CK G+M K +
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAH 542

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            LL +M+ + + P  VT+N LM+GFC+ G +     L   M+ KG   +  ++N L+   
Sbjct: 543 ELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQY 602

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C    +     +Y+ M    + P   TYN L+ G  +  N+ +A  L  +M        +
Sbjct: 603 CIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTA 662

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            T+   I G  K    +EA ++F+ +R        + Y+  ++   + G  +   +L
Sbjct: 663 ATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLEL 719



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 219/401 (54%), Gaps = 4/401 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL-CRTRNTLVALKL 208
           + + F+     L   G ++EA +LF KL  +    +V + N  ++ L C      +A+K+
Sbjct: 170 HPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKV 229

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           FEE   E G +C  + V+ N ++  LC+ G V +A  LL+QM DR   P+V++Y  ++ G
Sbjct: 230 FEEF-PELG-VCW-NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSG 286

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           +C + +  +   L  E+   G++PD   +N +I   CK+G++ +  +LL  M + GV PD
Sbjct: 287 YCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPD 346

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            V Y +++ GFC +G +S A +LF  M  K    D+ +Y  +I+  CK  K+ +A  ++ 
Sbjct: 347 NVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFN 406

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EML + + P  +TY  L+ G  + G + +A  + ++M    + P+  T+    DGLCKNG
Sbjct: 407 EMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNG 466

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            +  A ++   +     +  + TYN ++NGLCK+G ++   KL   +   G  PD +T +
Sbjct: 467 EIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYT 526

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           T++   CK G+M KA++LL  M  K   P+ VTF  L+ GF
Sbjct: 527 TLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGF 567



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 185/369 (50%), Gaps = 5/369 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+++  A   FD M + K  P + ++T ++  + K+ +      +F  +   GL PD
Sbjct: 359 KLGNVSA--ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPD 416

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 LI+  CK G    AF V  ++++   TPN VT+  L +GLC  G I  A  L  
Sbjct: 417 EVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLH 476

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +++     PNV T+NT++NGLC+  N    +KL EEM     A   PD +TY +++D  C
Sbjct: 477 EMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD---LAGFYPDTITYTTLMDAYC 533

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G + KA ELL  M ++ + P ++T+N L+ GFC     ++ + L   M++ G+ P+  
Sbjct: 534 KMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNAT 593

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           TFN+++   C    M     + + M  RGV PD+ TYN L+ G C    +  A  L   M
Sbjct: 594 TFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 653

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V KG      +Y+ LI    K +K  +A  L+ EM    +      Y+  +   ++ GN 
Sbjct: 654 VEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNW 713

Query: 416 GDALKLIDK 424
              L+L D+
Sbjct: 714 EITLELCDE 722


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 257/537 (47%), Gaps = 39/537 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F+ + K +  P   ++  ++       ++D   SL +R  + G  P +   N +
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + CL KMG    A  V   + +    PN  T+N LI+ LC  G++  A  L   +     
Sbjct: 350 LTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGL 408

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV T N +++ LC+++    A  +FE+M  +   +C PD +T+ S+IDGL K G VD 
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYK---VCTPDEITFCSLIDGLGKVGRVDD 465

Query: 243 AKELLLQMKDRNINPNVITYNSLICGF--------------------CCVD--------- 273
           A ++  +M D +   N I Y SLI  F                    C  D         
Sbjct: 466 AYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMD 525

Query: 274 ------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                 + ++ + +F E+      PD  +++ +I+   K G  ++   L   M ++G   
Sbjct: 526 CMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           DT  YN ++DGFC  G++++A +L   M +KG    V +Y  +I+   K  ++++A  L+
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            E  S+RI  +V+ Y++L+ G  +VG + +A  +++++    + P+ +T+ + +D L K 
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKA 705

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             + EA+  FQ+++  KC     TY  LINGLCK+ +   A   +  +Q +G  P  ++ 
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +TMI  L K G + +A  L    +A   VP    +  ++ G    N+      L  +
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 266/540 (49%), Gaps = 5/540 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S+  +  F  M ++   P +  FT L+   AK  + D+ +SL   + S+ L  D+ + N+
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            I+   K+G    A+     I  +   P+ VT+  +I  LC   R+ EA  +F+ L    
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P    +NT+I G         A  L E    + G+I  P V+ YN I+  L K G VD
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK-GSI--PSVIAYNCILTCLRKMGKVD 360

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  +  +MK ++  PN+ TYN LI   C       A  L   M   G+ P+V T N M+
Sbjct: 361 EALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMV 419

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK  K+D+   + E M  +   PD +T+ SL+DG   VGR+  A +++  M+   CR
Sbjct: 420 DRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCR 479

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +   Y  LI       + ED   +Y++M+++   P +   NT +  +F+ G       +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            ++++    VPD+ +++  I GL K GF  E  ++F +++   C L    YN +I+G CK
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G++  A +L   ++ KG  P VVT  ++I  L K  ++D+A  L  + ++K    + V 
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + +L+ GF +  +  +  ++L ++  + L  +  + +S ++D L K ++  E L  F+ +
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNS-LLDALVKAEEINEALVCFQSM 718



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 222/462 (48%), Gaps = 32/462 (6%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D M K    P + +  I++  L K+++ D   ++F++++     PD      LI+ L K+
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKV 460

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G    A+ +  ++L S    N++ +  LI      GR  +  +++K +    C P++   
Sbjct: 461 GRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLL 520

Query: 190 NTLINGLCRTRNTLVALKLFEEM------------------------VNEFGAI------ 219
           NT ++ + +         +FEE+                         NE   +      
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580

Query: 220 --CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
             C  D   YN +IDG CK G V+KA +LL +MK +   P V+TY S+I G   +D   E
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  LF E     ++ +VV ++++I+   K G++D+   +LE ++Q+G+ P+  T+NSL+D
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLD 700

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
                  I+ A   F SM    C  +  +Y ILIN  CK +K   A   ++EM  + ++P
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           S I+Y T++SGL + GN+ +A  L D+ + N  VPDS  +   I+GL      ++A  +F
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
           +  R     +  +T   L++ L K   L+ A  +   L+  G
Sbjct: 821 EETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 150/615 (24%), Positives = 274/615 (44%), Gaps = 41/615 (6%)

Query: 20  CNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           CN   +    P+ +  LS+ +FK        +  R K      N A+ +F    +    P
Sbjct: 40  CNVLETGAWGPSAENALSALNFKPQPEFVIGVLRRLKD----VNRAIEYFRWYERRTELP 95

Query: 80  G-MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV-LNLLINCLCKMGITSGAFV 137
               S+  LL ++A+ + +D +  +   ++  G  P +   + ++++C+    +  G F 
Sbjct: 96  HCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREG-FD 154

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V+  + +  F P    +  LI    A         LF+++     +P V  F TLI G  
Sbjct: 155 VVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214

Query: 198 RTRNTLVALKLFEEM---------------VNEFGAI-----------------CKPDVV 225
           +      AL L +EM               ++ FG +                  KPD V
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TY S+I  LCK   +D+A E+   ++     P    YN++I G+     + EA  L    
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
              G  P V+ +N ++    K GK+D+  R+ E M ++   P+  TYN L+D  C  G++
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A EL  SM   G   +V + NI+++  CK QK+++A  ++ +M  +   P  IT+ +L
Sbjct: 394 DCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSL 453

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + GL +VG + DA K+ +KM  +D   +S  + + I     +G   +  ++++ + N  C
Sbjct: 454 IDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNC 513

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
              ++  N  ++ + K G  +    +F  ++ +  +PD  + S +IH L K G  ++  +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           L   M+ + CV     +  ++ GF +  K +K   LL +M  +    + ++  S V+D L
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS-VIDGL 632

Query: 586 SKDKKYRECLNQFRH 600
           +K  +  E    F  
Sbjct: 633 AKIDRLDEAYMLFEE 647


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 258/537 (48%), Gaps = 39/537 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F+ + + +  P   ++  ++       ++D    L +R  + G  P +   N +
Sbjct: 317 DEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCI 376

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + CL K      A  +   + R    PN  T+N LI+ LC EG++  A  +   +     
Sbjct: 377 LTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGL 435

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV+T N +I+ LC+ +    A  +FE M ++   +C P+ VT++S+IDGL K G VD 
Sbjct: 436 FPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK---VCTPNAVTFSSLIDGLGKCGRVDD 492

Query: 243 AKELLLQMKDRNINPNVITYNSLICGF--------------------CCVD--------- 273
           A  L  +M D    P  I Y SLI  F                    C  D         
Sbjct: 493 AYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMD 552

Query: 274 ------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                 + ++ + LF E+  +G  PD  +++ +I+   K G  ++   L   M ++G   
Sbjct: 553 CVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVL 612

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           DT  YN+++DGFC  G++++A +L   M  KG    V +Y  +I+   K  ++++A  L+
Sbjct: 613 DTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLF 672

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            E  S  I+ +V+ Y++L+ G  +VG + +A  +++++    + P+ +T+   +D L K 
Sbjct: 673 EEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 732

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             + EA+  FQ++++ KC     TY+ LINGLC++ +   A   +  +Q  G  P+ +T 
Sbjct: 733 EEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITY 792

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +TMI  L K G + +A+ L    +A   +P   ++  ++ G    NK      L  +
Sbjct: 793 TTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 849



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 216/427 (50%), Gaps = 3/427 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F+ M     +P   +F+ L+  L K  + D   SL++++   G  P   V   L
Sbjct: 456 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 515

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I    K G       +   ++ +  +P+    N  ++ +   G   +   LF+++N    
Sbjct: 516 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 575

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  +++ LI+GL +        +LF  M  E G  C  D   YN++IDG CK G V+K
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAM-KEQG--CVLDTHAYNAVIDGFCKSGKVNK 632

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +MK +   P V+TY S+I G   +D   EA  LF E   NG++ +VV ++++I+
Sbjct: 633 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 692

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G++D+   ++E ++Q+G+ P+  T+N L+D       I+ A   F SM    C  
Sbjct: 693 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP 752

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  +Y+ILIN  C+ +K   A   ++EM    ++P+ ITY T++SGL + GN+ +A  L 
Sbjct: 753 NQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLF 812

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            + + N  +PDS ++   I+GL      ++A  +F+  R   C +  +T   L++ L K 
Sbjct: 813 SRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKA 872

Query: 483 GRLKTAC 489
             L+ A 
Sbjct: 873 ECLEQAA 879



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/570 (25%), Positives = 267/570 (46%), Gaps = 34/570 (5%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA      M K K  P  +++TIL+  L++ ++ D ++ LF ++   G   ++ +   LI
Sbjct: 178 EAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLI 237

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
               + G    A  +L  +  +    + V +N  I+     G++  + + F ++      
Sbjct: 238 RVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLM 297

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEE---------------MVNEFGAICK------- 221
           P+ VT+ ++I  LC+      A++LFE+               M+  +G+  K       
Sbjct: 298 PDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGL 357

Query: 222 ----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
                     P V+ YN I+  L K   V++A  +  +MK R+  PNV TYN LI   C 
Sbjct: 358 LERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCR 416

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
                 A  +  +M   G+ P+V+T N MI+  CK  K+++   + E M  +   P+ VT
Sbjct: 417 EGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVT 476

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           ++SL+DG    GR+  A  L+  M+  G       Y  LI +  K  + ED   +Y+EM+
Sbjct: 477 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 536

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
                P +   NT +  +F+ G       L  ++  +  +PD+ +++  I GL K G   
Sbjct: 537 HTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLAN 596

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           E  ++F A++   C L    YN +I+G CK G++  A +L   ++ KG  P VVT  ++I
Sbjct: 597 ETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVI 656

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             L K  ++D+A  L  + ++     + V + +L+ GF +  +  +  +++ ++  +K +
Sbjct: 657 DGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL-MQKGL 715

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             ++   + ++D L K ++  E L  F+ +
Sbjct: 716 TPNVYTWNCLLDALVKAEEINEALICFQSM 745



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 235/496 (47%), Gaps = 39/496 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+  F+ M K    P + ++ IL+ ML +  + +  + +   +   GLFP++  +N++
Sbjct: 387 EEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIM 445

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           I+ LCK      A  +   +     TPN VTF+ LI+GL   GR+ +A  L++K+     
Sbjct: 446 IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH 505

Query: 178 ------------------------NVF------ACDPNVVTFNTLINGLCRTRNTLVALK 207
                                    ++       C P++   NT ++ + +   T     
Sbjct: 506 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRA 565

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           LF E +N  G I  PD  +Y+ +I GL K G  ++  EL   MK++    +   YN++I 
Sbjct: 566 LFRE-INAHGFI--PDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVID 622

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GFC      +A  L  EM   G  P VVT+ ++I+   K  ++D+   L E     G+  
Sbjct: 623 GFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKL 682

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + V Y+SL+DGF  VGRI  A  +   ++ KG   +VY++N L++A  K +++ +A+  +
Sbjct: 683 NVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICF 742

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           + M   +  P+ ITY+ L++GL +V     A     +MQ   + P++ T+ T I GL K 
Sbjct: 743 QSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKA 802

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G +LEA  +F   +         +YN +I GL    +   A  LF   + KG      TC
Sbjct: 803 GNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTC 862

Query: 508 STMIHWLCKEGQMDKA 523
             ++  L K   +++A
Sbjct: 863 VVLLDALHKAECLEQA 878



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 248/551 (45%), Gaps = 36/551 (6%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV-LNLLINCLCKMGITSGAFVVLGR 141
           ++  LL ++A+N ++D +  + + ++ +G  P   + + L+ NC+    +   AF ++  
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLRE-AFDIIQT 185

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           + +  F P    +  LI  L           LF ++     + NV  F TLI    R   
Sbjct: 186 MRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGR 245

Query: 202 TLVALKLFEEM---------------VNEFGAICK-----------------PDVVTYNS 229
              AL L +EM               ++ FG   K                 PD VTY S
Sbjct: 246 VDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTS 305

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I  LCK   +D+A EL  Q++     P    YN++I G+     + EA  L       G
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             P V+ +N ++    K  ++++  R+ E M +R   P+  TYN L+D  C  G+++ A 
Sbjct: 366 SIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAAL 424

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           E+   M   G   +V + NI+I+  CK QK+E+A  ++  M  +   P+ +T+++L+ GL
Sbjct: 425 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 484

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            + G + DA  L +KM     VP +  + + I    K G   +  ++++ + +  C   +
Sbjct: 485 GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDL 544

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
              N  ++ + K G  +    LF  +   G IPD  + S +IH L K G  ++  +L   
Sbjct: 545 TLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA 604

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           M+ + CV     +  ++ GF ++ K +K   LL +M  +    + ++  S V+D L+K  
Sbjct: 605 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGS-VIDGLAKID 663

Query: 590 KYRECLNQFRH 600
           +  E    F  
Sbjct: 664 RLDEAYMLFEE 674



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 4/239 (1%)

Query: 366 SYNILIN--ANC-KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           S NI I   ANC K +K+ +A  + + M   + RP+   Y  L+  L +V      L L 
Sbjct: 159 SSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILF 218

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +MQ      +   F T I    + G V  A+ +   +++   +  I  YN  I+   K 
Sbjct: 219 HQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKA 278

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G++  + K FH ++  G +PD VT ++MI  LCK  ++D+A +L   +E    VP    +
Sbjct: 279 GKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAY 338

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            T++ G+    K  +   LL +  A+  + S ++ +  ++  L K ++  E L  F  +
Sbjct: 339 NTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNC-ILTCLGKKRRVEEALRIFEEM 396



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 1/201 (0%)

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            YN+LL  + +        +++++M L+   P S      +    K+  + EA  + Q +
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           R  K       Y  LI  L ++        LFH++Q  G   +V   +T+I    +EG++
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           D A  LL +M++ +     V +   +  F +  K        H+M +  L+  D++ +S 
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTS- 305

Query: 581 VVDLLSKDKKYRECLNQFRHL 601
           ++ +L K  +  E +  F  L
Sbjct: 306 MIGVLCKANRLDEAVELFEQL 326


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 262/537 (48%), Gaps = 39/537 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F+ +   K  P + ++  ++       +++   SL +R    G  P +   N +
Sbjct: 324 DEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCI 383

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + CL + G    A  +L   ++    PN  ++N LI+ LC  G +  A ++   +     
Sbjct: 384 LTCLGRKGKVEEALRIL-EAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGL 442

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN++T N +I+ LC+ +    A  +F  + ++   +C PD VT+ S+IDGL + G V+ 
Sbjct: 443 FPNIITVNIMIDRLCKAQRLDEACSIFLGLDHK---VCTPDSVTFCSLIDGLGRHGKVND 499

Query: 243 AKELLLQMKDRNINPNVITYNSLICGF--------------------CCVD--------- 273
           A  L  +M D    PN + Y SLI  F                    C  D         
Sbjct: 500 AYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMD 559

Query: 274 ------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                 + ++ + LF E+   G+ PDV +++ +I+   K G      +L   M ++G++ 
Sbjct: 560 CVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHL 619

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           DT  YN ++DGFC  G++++A +L   M +KG +  V +Y  +I+   K  ++++A  L+
Sbjct: 620 DTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLF 679

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            E  S+ +  +V+ Y++L+ G  +VG + +A  +++++    + P+++T+   +D L K 
Sbjct: 680 EEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKA 739

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             + EA+  FQ ++N KC     TY+ ++NGLCK+ +   A   +  +Q +G  P+ +T 
Sbjct: 740 EEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITY 799

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +TMI  L + G + +A DL    ++   +P    +  ++ G    NK     +L  +
Sbjct: 800 TTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEE 856



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 268/520 (51%), Gaps = 4/520 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A  FF  +      P   +FT ++ +L K ++ D  V LF+ L+SN   P ++  N +I 
Sbjct: 291 AWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIM 350

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
               +G  + A+ +L R  R    P+ + +N ++  L  +G++ EA R+ + + + A  P
Sbjct: 351 GYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA-P 409

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N+ ++N LI+ LC+      ALK+ + M  E G    P+++T N +ID LCK   +D+A 
Sbjct: 410 NLTSYNILIDMLCKAGELEAALKVQDSM-KEAGLF--PNIITVNIMIDRLCKAQRLDEAC 466

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            + L +  +   P+ +T+ SLI G        +A  L+ +M+D+G  P+ V + ++I   
Sbjct: 467 SIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNF 526

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K G+ +  +++ + M+ RG +PD +  N+ MD     G I + R LF  + ++G   DV
Sbjct: 527 FKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDV 586

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            SY+ILI+   K    +D   L+ EM  + +      YN ++ G  + G +  A +L+++
Sbjct: 587 RSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEE 646

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+   + P   T+ + IDGL K   + EA  +F+  ++   +L +  Y+ LI+G  K+GR
Sbjct: 647 MKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGR 706

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +  A  +   L  KG  P+  T + ++  L K  ++D+A     +M+   C P+EVT+  
Sbjct: 707 IDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSI 766

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           ++ G  +  K +K  V   +M  + L  + ++ ++ +  L
Sbjct: 767 MVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGL 806



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 236/497 (47%), Gaps = 74/497 (14%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+   + M KM  +P +TS+ IL+ ML K  + +  + +   +   GLFP++  +N++
Sbjct: 394 EEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIM 452

Query: 123 INCLCKM-----------------------------------GITSGAFVVLGRILRSCF 147
           I+ LCK                                    G  + A+++  ++L S  
Sbjct: 453 IDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQ 512

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN---------------------- 185
           TPN V +  LI      GR  +  +++K++    C P+                      
Sbjct: 513 TPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRA 572

Query: 186 -------------VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
                        V +++ LI+GL +   +    KLF EM  +   +   D   YN +ID
Sbjct: 573 LFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHL---DTRAYNIVID 629

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G CK G V+KA +LL +MK + + P V+TY S+I G   +D   EA  LF E     V  
Sbjct: 630 GFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDL 689

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +VV ++++I+   K G++D+   +LE ++Q+G+ P+T T+N L+D       I  A   F
Sbjct: 690 NVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCF 749

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
            +M +  C  +  +Y+I++N  CK +K   A   ++EM  + ++P+ ITY T++SGL +V
Sbjct: 750 QNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARV 809

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           GN+ +A  L ++ + +  +PDS  +   I+GL      ++A  +F+  R   C +  +T 
Sbjct: 810 GNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTC 869

Query: 473 NCLINGLCKMGRLKTAC 489
             L++ L K   L+ A 
Sbjct: 870 VVLLDALHKADCLEQAA 886



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 254/525 (48%), Gaps = 7/525 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    + M K K  P  +++T L+  L+   + D +++L +++   G    + +   LI
Sbjct: 185 EAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLI 244

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
               + G    A  +L  +  + F  + V +N  I+     G++  A + F +L      
Sbjct: 245 CVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLV 304

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VTF ++I  LC+      A++LFEE+ +     C   V  YN++I G    G  ++A
Sbjct: 305 PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPC---VYAYNTMIMGYGSVGKFNEA 361

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI-EMMDNGVQPDVVTFNAMIN 302
             LL + K +   P+VI YN ++   C     K  + L I E M     P++ ++N +I+
Sbjct: 362 YSLLERQKRKGCIPSVIAYNCILT--CLGRKGKVEEALRILEAMKMDAAPNLTSYNILID 419

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+++   ++ + M + G+ P+ +T N ++D  C   R+  A  +F+ +  K C  
Sbjct: 420 MLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTP 479

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  ++  LI+   +  KV DA  LY +ML     P+ + Y +L+   F+ G   D  K+ 
Sbjct: 480 DSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIY 539

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M      PD      Y+D + K G + +   +F+ I+       + +Y+ LI+GL K 
Sbjct: 540 KEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKG 599

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G  K   KLF+ ++ +G   D    + +I   CK G+++KA  LL +M+ K   P+ VT+
Sbjct: 600 GFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTY 659

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            +++ G  + ++  +  +L  + A  K V  ++ + S ++D   K
Sbjct: 660 GSVIDGLAKIDRLDEAYMLFEE-AKSKAVDLNVVVYSSLIDGFGK 703



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 186/379 (49%), Gaps = 6/379 (1%)

Query: 188 TFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
            +N L+  + RTRN     ++ EEM +  FG    P   T   ++    K   + +A  +
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFG----PSNNTCIEMVASFVKSRKLREAFGV 189

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           +  M+     P    Y +LI       +      L  +M + G +  V  F  +I    +
Sbjct: 190 IETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAR 249

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G++D    LL+ M     N D V YN  +D F  VG++  A + F  + S+G   D  +
Sbjct: 250 EGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVT 309

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           +  +I   CK ++V++AV L+ E+ S +  P V  YNT++ G   VG   +A  L+++ +
Sbjct: 310 FTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQK 369

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
               +P    +   +  L + G V EA+++ +A++       + +YN LI+ LCK G L+
Sbjct: 370 RKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELE 428

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A K+   ++  G  P+++T + MI  LCK  ++D+A  + L ++ K C P  VTFC+L+
Sbjct: 429 AALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLI 488

Query: 547 RGFVQNNKKSKVVVLLHKM 565
            G  ++ K +   +L  KM
Sbjct: 489 DGLGRHGKVNDAYMLYEKM 507



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 194/420 (46%), Gaps = 5/420 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    ++   + G +  N+A   ++ M+    +P    +T L+    K  + +    
Sbjct: 480 DSVTFCSLIDGLGRHGKV--NDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHK 537

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           ++K +   G  PDL +LN  ++C+ K G       +   I     TP+  +++ LI+GL 
Sbjct: 538 IYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLV 597

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G   +  +LF ++       +   +N +I+G C++     A +L EEM  +     +P
Sbjct: 598 KGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG---LQP 654

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            VVTY S+IDGL K   +D+A  L  + K + ++ NV+ Y+SLI GF  V    EA  + 
Sbjct: 655 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLIL 714

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            E+M  G+ P+  T+N +++   K  ++D+     + M      P+ VTY+ +++G C V
Sbjct: 715 EELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKV 774

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            + ++A   +  M  +G + +  +Y  +I+   +   V +A  L+    S    P    Y
Sbjct: 775 RKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACY 834

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N ++ GL       DA  L ++ +L      S T    +D L K   + +A  V   +R 
Sbjct: 835 NAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLRE 894



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 86/201 (42%), Gaps = 1/201 (0%)

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            YN LL  + +  NL    +++++M +    P + T    +    K+  + EA  V + +
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           R  K       Y  LI  L           L  ++Q  G    V   +T+I    +EG++
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           D A  LL +M++ +     V +   +  F +  K        H++ ++ LV  D++ +S 
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTS- 312

Query: 581 VVDLLSKDKKYRECLNQFRHL 601
           ++ +L K ++  E +  F  L
Sbjct: 313 MIGVLCKAERVDEAVELFEEL 333


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 235/453 (51%), Gaps = 6/453 (1%)

Query: 51  LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           + DR + G+  + +A+  FD +++      + S    L  +A++      VS F R+   
Sbjct: 23  IQDRARVGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPA-AAVSRFNRMARA 81

Query: 111 G---LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
           G   + P +    +LI C C  G     F  LG +++  F    + FN L+ GLCA+ R 
Sbjct: 82  GASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRT 141

Query: 168 MEAARL-FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
            +A  +  + +   +C PNV +   ++ GLC    +  AL+L   M ++ G  C P+VV+
Sbjct: 142 DDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGG-CLPNVVS 200

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+++IDGL K G  DKA     +M DR I PNV+ Y+S+I   C      +A  +   M+
Sbjct: 201 YSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMV 260

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            NGV P+  T+ ++++  C  G++ +  + LE M   GV P+ VTY+S MD  C  GR +
Sbjct: 261 KNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCT 320

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            AR++F SMV +G + D+ +Y+ L++    +  + +   L+  M+   ++P    +NTL+
Sbjct: 321 EARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLI 380

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
               + G + +A+ +  KM+   + P+  T++T I+G CK   +  A+ +FQ + +    
Sbjct: 381 YASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVS 440

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
               TYN ++ GL + GR  TA + + ++   G
Sbjct: 441 PNFITYNIMLQGLFRTGRTATAKEFYVQIIKSG 473



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 185/376 (49%), Gaps = 6/376 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P V T+  LI   C      +       +V + G   +P  + +N ++ GLC D   D A
Sbjct: 88  PTVHTYGILIGCCCSAGRLDLGFAALGHVVKK-GFRVEP--IIFNPLLKGLCADKRTDDA 144

Query: 244 KELLLQ-MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ--PDVVTFNAM 300
            +++L+ M + +  PNV ++  ++ G C  +  +EA  L   M D+G    P+VV+++ +
Sbjct: 145 MDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTV 204

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+   K G  DK       M+ R + P+ V Y+S++   C    + +A E+   MV  G 
Sbjct: 205 IDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGV 264

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             + ++Y  L++  C   ++ +A+    +M S  + P+V+TY++ +  L + G   +A K
Sbjct: 265 TPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARK 324

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           + D M    + PD  T+++ + G    G ++E   +F  +     +     +N LI    
Sbjct: 325 IFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASA 384

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G++  A  +F +++ +G  P+ VT ST+I+  CK  +M+ A  L  +M +    P+ +
Sbjct: 385 KQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFI 444

Query: 541 TFCTLLRGFVQNNKKS 556
           T+  +L+G  +  + +
Sbjct: 445 TYNIMLQGLFRTGRTA 460



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 188/408 (46%), Gaps = 4/408 (0%)

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G   +A  +F +L        + + N  +  + R  N   A+  F  M     ++  P
Sbjct: 30  GSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARD-NPAAAVSRFNRMARAGASMVTP 88

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            V TY  +I   C  G +D     L  +  +      I +N L+ G C      +A  + 
Sbjct: 89  TVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIV 148

Query: 283 IE-MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN--PDTVTYNSLMDGF 339
           +  M +    P+V +   ++   C + +  +   LL +M   G    P+ V+Y++++DG 
Sbjct: 149 LRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGL 208

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
              G   +A   +  M+ +    +V  Y+ +I A CK Q ++ A+ ++  M+   + P+ 
Sbjct: 209 LKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNC 268

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            TY +L+ G    G L +A+K ++KM  N V P+  T+++++D LCKNG   EA ++F +
Sbjct: 269 FTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDS 328

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +  I TY+ L++G    G L     LF  +      PD    +T+I+   K+G+
Sbjct: 329 MVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGK 388

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +D+A  +   M  +   P+ VT+ TL+ G+ +  +    + L  +M +
Sbjct: 389 VDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVS 436



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 153/319 (47%), Gaps = 3/319 (0%)

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD-KV 313
           + P V TY  LI   C              ++  G + + + FN ++   C D + D  +
Sbjct: 86  VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV--SKGCRHDVYSYNILI 371
           + +L  M +    P+  ++  ++ G C   R   A EL   M     GC  +V SY+ +I
Sbjct: 146 DIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVI 205

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +   K    + A   YREML  RI P+V+ Y+++++ L +   +  A+++ D+M  N V 
Sbjct: 206 DGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVT 265

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+ FT+ + + G C +G + EA++  + + +   E  + TY+  ++ LCK GR   A K+
Sbjct: 266 PNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F  +  +G  PD+ T S+++H    EG + + + L   M   +  P    F TL+    +
Sbjct: 326 FDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAK 385

Query: 552 NNKKSKVVVLLHKMAAEKL 570
             K  + +++  KM  + L
Sbjct: 386 QGKVDEAMLVFSKMRQQGL 404


>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 562

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 129/344 (37%), Positives = 198/344 (57%), Gaps = 23/344 (6%)

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
           G + +P++V YN+IID +CKD   + A +L  +M  + I P+V TYN+LI GFC V   K
Sbjct: 234 GKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLK 293

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  LF +M    + PDV TFN +++  CK+G++ +    L +M+++G+ PD VTYNSLM
Sbjct: 294 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLM 353

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           D +CLV  +++A+ +F +M  +G   +V SY+I+IN  CK + V+ A+ L++EM  ++I 
Sbjct: 354 DRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIF 413

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI--DGLCKNGFVLEAV 454
           P+VITY++L+ GL + G +  AL+L D+M      PD  T    +   G+  N F     
Sbjct: 414 PNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMF----- 468

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
                           TY  LI+GLCK GRL+ A  +F  L  KG    V T + MIH  
Sbjct: 469 ----------------TYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGF 512

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           C +G  D+A  LL  M+   C+P+ VT+  ++R    N++  K 
Sbjct: 513 CNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKA 556



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 177/347 (51%), Gaps = 22/347 (6%)

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           + L +R++   L P+L + N +I+ +CK  + + AF +   ++     P+  T+N LING
Sbjct: 226 LQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALING 285

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
            C  G++ +A  LF K+     +P+V TFN L++  C+      A      M+ +     
Sbjct: 286 FCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG---I 342

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           KPDVVTYNS++D  C    V+KAK +   M  R +  NV +Y+ +I  FC +    +A  
Sbjct: 343 KPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMK 402

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF EM    + P+V+T++++I+  CK G++     L + M  RG  PD +T         
Sbjct: 403 LFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIIT--------- 453

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                     L   +  +G R ++++Y ILI+  CK  ++EDA  ++ ++L +    +V 
Sbjct: 454 ----------LTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVN 503

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           TY  ++ G    G   +A+ L+ KM+ N  +P++ T+   I  L  N
Sbjct: 504 TYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDN 550



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 156/292 (53%), Gaps = 16/292 (5%)

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           +QP++V +N +I+  CKD   +    L   M+ + + PD  TYN+L++GFC+VG++  A 
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            LF  M S+    DVY++NIL++A CK+ +V++A      M+ + I+P V+TYN+L+   
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
             V  +  A  + + M    V  +  +++  I+  CK   V +A+++F+ + + +    +
Sbjct: 357 CLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNV 416

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS----------------TMIHW 513
            TY+ LI+GLCK GR+  A +L   +  +G  PD++T +                 +I  
Sbjct: 417 ITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDG 476

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           LCK G+++ A ++  D+  K    +  T+  ++ GF       + + LL KM
Sbjct: 477 LCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKM 528



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 158/323 (48%), Gaps = 25/323 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   +  M+  +  P + ++  L+       +    + LF ++ S  + PD++  N+L
Sbjct: 258 NDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNIL 317

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK G    A   L  +++    P+ VT+N L++  C    + +A  +F  ++    
Sbjct: 318 VDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGV 377

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             NV +++ +IN  C+ +    A+KLF+EM ++      P+V+TY+S+IDGLCK G +  
Sbjct: 378 TANVRSYSIMINRFCKIKMVDQAMKLFKEMHHK---QIFPNVITYSSLIDGLCKSGRISY 434

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL  +M DR   P++IT                   L  ++ D G++P++ T+  +I+
Sbjct: 435 ALELNDEMHDRGQQPDIIT-------------------LTRQLKDQGIRPNMFTYTILID 475

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+++    + E ++ +G N    TY  ++ GFC  G    A  L   M    C  
Sbjct: 476 GLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIP 535

Query: 363 DVYSYNILINA---NCKDQKVED 382
           +  +Y I+I +   N ++ K E+
Sbjct: 536 NAVTYEIIIRSLFDNDENDKAEN 558



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 121/233 (51%)

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           +LL  +  + + P+ V YN+++D  C     + A +L+  MVSK    DV +YN LIN  
Sbjct: 227 QLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGF 286

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   K++DA+ L+ +M SE I P V T+N L+    + G + +A   +  M    + PD 
Sbjct: 287 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDV 346

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+ + +D  C    V +A  +F  + +      + +Y+ +IN  CK+  +  A KLF  
Sbjct: 347 VTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKE 406

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           + HK   P+V+T S++I  LCK G++  A +L  +M  +   P  +T    L+
Sbjct: 407 MHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLK 459



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 19/229 (8%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+K    P + ++  L+       + +   S+F  ++  G+  ++   +++IN  CK+ +
Sbjct: 337 MMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKM 396

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL----------------FK 175
              A  +   +      PN +T++ LI+GLC  GRI  A  L                 +
Sbjct: 397 VDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTR 456

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +L      PN+ T+  LI+GLC+      A  +FE+++ +   I    V TY  +I G C
Sbjct: 457 QLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNIT---VNTYTVMIHGFC 513

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
             G  D+A  LL +MKD    PN +TY  +I      D+  +A+  F++
Sbjct: 514 NKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFFVK 562



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 96/183 (52%), Gaps = 1/183 (0%)

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           L+L+ ++    + P+   + T ID +CK+    +A  ++  + + +    + TYN LING
Sbjct: 226 LQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALING 285

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            C +G+LK A  LF+++  +   PDV T + ++   CKEG++ +A + L  M  +   P 
Sbjct: 286 FCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPD 345

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            VT+ +L+  +   N+ +K   + + M + + V +++   S +++   K K   + +  F
Sbjct: 346 VVTYNSLMDRYCLVNEVNKAKSIFNTM-SHRGVTANVRSYSIMINRFCKIKMVDQAMKLF 404

Query: 599 RHL 601
           + +
Sbjct: 405 KEM 407



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 35/215 (16%)

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L R +  + ++P+++ YNT++  + +     DA  L  +M    + PD  T+   I+G C
Sbjct: 228 LLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFC 287

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT------------------ 487
             G + +A+ +F  + +      + T+N L++  CK GR+K                   
Sbjct: 288 IVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVV 347

Query: 488 -----------------ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
                            A  +F+ + H+G   +V + S MI+  CK   +D+A  L  +M
Sbjct: 348 TYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEM 407

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             K   P+ +T+ +L+ G  ++ + S  + L  +M
Sbjct: 408 HHKQIFPNVITYSSLIDGLCKSGRISYALELNDEM 442


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 258/537 (48%), Gaps = 39/537 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F+ + + +  P   ++  ++       ++D    L +R  + G  P +   N +
Sbjct: 72  DEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCI 131

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + CL K      A  +   + R    PN  T+N LI+ LC EG++  A  +   +     
Sbjct: 132 LTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGL 190

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV+T N +I+ LC+ +    A  +FE M ++   +C P+ VT++S+IDGL K G VD 
Sbjct: 191 FPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK---VCTPNAVTFSSLIDGLGKCGRVDD 247

Query: 243 AKELLLQMKDRNINPNVITYNSLICGF--------------------CCVD--------- 273
           A  L  +M D    P  I Y SLI  F                    C  D         
Sbjct: 248 AYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMD 307

Query: 274 ------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                 + ++ + LF E+  +G  PD  +++ +I+   K G  ++   L   M ++G   
Sbjct: 308 CVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVL 367

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           DT  YN+++DGFC  G++++A +L   M  KG    V +Y  +I+   K  ++++A  L+
Sbjct: 368 DTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLF 427

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            E  S  I+ +V+ Y++L+ G  +VG + +A  +++++    + P+ +T+   +D L K 
Sbjct: 428 EEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 487

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             + EA+  FQ++++ KC     TY+ LINGLC++ +   A   +  +Q  G  P+ +T 
Sbjct: 488 EEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITY 547

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +TMI  L K G + +A+ L    +A   +P   ++  ++ G    NK      L  +
Sbjct: 548 TTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 604



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 216/427 (50%), Gaps = 3/427 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F+ M     +P   +F+ L+  L K  + D   SL++++   G  P   V   L
Sbjct: 211 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 270

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I    K G       +   ++ +  +P+    N  ++ +   G   +   LF+++N    
Sbjct: 271 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 330

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  +++ LI+GL +        +LF  M  E G  C  D   YN++IDG CK G V+K
Sbjct: 331 IPDARSYSILIHGLVKAGLANETYELFYAM-KEQG--CVLDTHAYNAVIDGFCKSGKVNK 387

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +MK +   P V+TY S+I G   +D   EA  LF E   NG++ +VV ++++I+
Sbjct: 388 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 447

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G++D+   ++E ++Q+G+ P+  T+N L+D       I+ A   F SM    C  
Sbjct: 448 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP 507

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  +Y+ILIN  C+ +K   A   ++EM    ++P+ ITY T++SGL + GN+ +A  L 
Sbjct: 508 NQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLF 567

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            + + N  +PDS ++   I+GL      ++A  +F+  R   C +  +T   L++ L K 
Sbjct: 568 SRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKA 627

Query: 483 GRLKTAC 489
             L+ A 
Sbjct: 628 ECLEQAA 634



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 235/496 (47%), Gaps = 39/496 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+  F+ M K    P + ++ IL+ ML +  + +  + +   +   GLFP++  +N++
Sbjct: 142 EEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIM 200

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           I+ LCK      A  +   +     TPN VTF+ LI+GL   GR+ +A  L++K+     
Sbjct: 201 IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH 260

Query: 178 ------------------------NVF------ACDPNVVTFNTLINGLCRTRNTLVALK 207
                                    ++       C P++   NT ++ + +   T     
Sbjct: 261 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRA 320

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           LF E +N  G I  PD  +Y+ +I GL K G  ++  EL   MK++    +   YN++I 
Sbjct: 321 LFRE-INAHGFI--PDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVID 377

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GFC      +A  L  EM   G  P VVT+ ++I+   K  ++D+   L E     G+  
Sbjct: 378 GFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKL 437

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + V Y+SL+DGF  VGRI  A  +   ++ KG   +VY++N L++A  K +++ +A+  +
Sbjct: 438 NVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICF 497

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           + M   +  P+ ITY+ L++GL +V     A     +MQ   + P++ T+ T I GL K 
Sbjct: 498 QSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKA 557

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G +LEA  +F   +         +YN +I GL    +   A  LF   + KG      TC
Sbjct: 558 GNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTC 617

Query: 508 STMIHWLCKEGQMDKA 523
             ++  L K   +++A
Sbjct: 618 VVLLDALHKAECLEQA 633



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 232/512 (45%), Gaps = 49/512 (9%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLT----------MLAKNKQYDTVVSLFKRLNSNGLF 113
           EA      M K K  P  +++TIL+           +L K  + D  V LF++L  N   
Sbjct: 28  EAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKV 87

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P  +                                    +N +I G  + G+  EA  L
Sbjct: 88  PCAY-----------------------------------AYNTMIMGYGSAGKFDEAYGL 112

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            ++       P+V+ +N ++  L + R    AL++FEEM  +      P+V TYN +ID 
Sbjct: 113 LERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRD----AVPNVPTYNILIDM 168

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LC++G ++ A E+   M+   + PNV+T N +I   C     +EA  +F  M D    P+
Sbjct: 169 LCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPN 228

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            VTF+++I+   K G++D    L E M+  G  P  + Y SL+  F   GR     +++ 
Sbjct: 229 AVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYK 288

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            MV  GC  D+   N  ++   K  + E    L+RE+ +    P   +Y+ L+ GL + G
Sbjct: 289 EMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 348

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
              +  +L   M+    V D+  +   IDG CK+G V +A Q+ + ++       + TY 
Sbjct: 349 LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYG 408

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +I+GL K+ RL  A  LF   +  G   +VV  S++I    K G++D+A  ++ ++  K
Sbjct: 409 SVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK 468

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
              P+  T+  LL   V+  + ++ ++    M
Sbjct: 469 GLTPNVYTWNCLLDALVKAEEINEALICFQSM 500



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 177/367 (48%), Gaps = 2/367 (0%)

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK   +D+A EL  Q++     P    YN++I G+     + EA  L       G  P 
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           V+ +N ++    K  ++++  R+ E M +R   P+  TYN L+D  C  G+++ A E+  
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRD 183

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M   G   +V + NI+I+  CK QK+E+A  ++  M  +   P+ +T+++L+ GL + G
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            + DA  L +KM     VP +  + + I    K G   +  ++++ + +  C   +   N
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
             ++ + K G  +    LF  +   G IPD  + S +IH L K G  ++  +L   M+ +
Sbjct: 304 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 363

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            CV     +  ++ GF ++ K +K   LL +M  +    + ++  S V+D L+K  +  E
Sbjct: 364 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGS-VIDGLAKIDRLDE 422

Query: 594 CLNQFRH 600
               F  
Sbjct: 423 AYMLFEE 429



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 12/182 (6%)

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING------ 478
           M L+   P S      +    K+  + EA  + Q +R  K       Y  LI        
Sbjct: 1   MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60

Query: 479 ----LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
               LCK  RL  A +LF +L+    +P     +TMI      G+ D+A  LL   +AK 
Sbjct: 61  FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            +PS + +  +L    +  +  + + +  +M  ++  V ++   + ++D+L ++ K    
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEM--KRDAVPNVPTYNILIDMLCREGKLNAA 178

Query: 595 LN 596
           L 
Sbjct: 179 LE 180


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 248/482 (51%), Gaps = 2/482 (0%)

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
           R  S  + P      +LI+C C +G  + AF  LG+I+++    N ++F  ++  LCAE 
Sbjct: 3   RAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEK 62

Query: 166 RIMEAARLFKKLNV-FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           R  +A  +  +      C P+V ++  L+ GLC  +    A+ L   M+ E G  C P+V
Sbjct: 63  RTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLI-HMMAEDGDHCPPNV 121

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           V+Y ++I G  K+  V KA  L  +M DR I P+V+T NS+I G C V    +A+ +  +
Sbjct: 122 VSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQ 181

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M D  + PD  T+N++++     G++ +  R+L+ M + G  P+ VTY+ L+D  C  G 
Sbjct: 182 MFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGG 241

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
            + ARE+  SM+      +V +Y  L++       + +   L   M+   +RP    +N 
Sbjct: 242 HTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNI 301

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            +    + G L +A+   +KM+   ++PD  ++ T IDGLCK G +  A+  F  + +  
Sbjct: 302 QIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDG 361

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I  +  LI+G    G+ + A +LF+ +  +G  P VV  +TMI  L KEG++ +A 
Sbjct: 362 LSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAK 421

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            L   M   +  P+ V++  ++ G+    K  +V+ LL  M +  L  + ++ ++ + D+
Sbjct: 422 TLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDM 481

Query: 585 LS 586
           LS
Sbjct: 482 LS 483



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 230/470 (48%), Gaps = 21/470 (4%)

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF--PDLFVLNLLINCLCKMGI 131
           K+  +P + S+T+LL  L   K+ +  V L   +  +G    P++     +I+   K   
Sbjct: 77  KLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDE 136

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A+ +   +L     P+ VT N +I+GLC    + +A  + +++      P+  T+N+
Sbjct: 137 VGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNS 196

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++G   +     A+++ ++M +  G    P+ VTY+ +ID LCK G   +A+E+L  M 
Sbjct: 197 LVHGYLSSGQLKEAVRILKQM-SRHGQ--PPNGVTYSMLIDCLCKFGGHTEAREILNSMI 253

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
               NPNV TY  L+ G+    D  E   L   M+ NGV+PD   FN  I    K G++D
Sbjct: 254 QSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLD 313

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +       M Q+G+ PD ++Y +++DG C +GR+  A   F  M+  G   D+  +  LI
Sbjct: 314 EAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLI 373

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +      K E A  L+ EM+   IRP+V+ + T++  LF+ G + +A  L D M +  V 
Sbjct: 374 HGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVK 433

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  ++   I G    G + E +++   + +   +    T+N L++ +  MG LK     
Sbjct: 434 PNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMG-LK----- 487

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
                     PDV TC+T+I   C++G+++    L  +M +K      VT
Sbjct: 488 ----------PDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVT 527



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 181/346 (52%), Gaps = 22/346 (6%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  T++  L+     + Q    V + K+++ +G  P+    ++LI+CLCK G  + A  +
Sbjct: 189 PDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREI 248

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +++S   PN  T+  L++G   +G ++E   L   +      P+   FN  I    +
Sbjct: 249 LNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVK 308

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+  F +M  + G +  PD+++Y ++IDGLCK G +D A     QM D  ++P+
Sbjct: 309 CGRLDEAMLTFNKMRQQ-GLM--PDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPD 365

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           ++ + +LI GF     W++A+ LF EMMD G++P VV F  MI+   K+GK+ +   L +
Sbjct: 366 IVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFD 425

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS-------------------KG 359
           LM    V P+ V+YN+++ G+ L G++    +L   M+S                    G
Sbjct: 426 LMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMG 485

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
            + DV + N LI++ C+D ++ED + L+REMLS+  +   +T N +
Sbjct: 486 LKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 33/344 (9%)

Query: 27  GRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTI 86
           G+PPN            G + +  ++   K G  T  EA    + MI+ + +P + ++  
Sbjct: 221 GQPPN------------GVTYSMLIDCLCKFGGHT--EAREILNSMIQSRGNPNVATYGG 266

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           LL   A       + +L   +  NG+ PD  + N+ I    K G    A +   ++ +  
Sbjct: 267 LLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQG 326

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+ +++  +I+GLC  GR+  A   F ++      P++V F  LI+G         A 
Sbjct: 327 LMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAE 386

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +LF EM++      +P VV + ++ID L K+G V +AK L   M   ++ PNV++YN++I
Sbjct: 387 ELFYEMMDRG---IRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAII 443

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G+       E   L  +M+  G++P+ VTFN                 LL+ M+  G+ 
Sbjct: 444 HGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNT----------------LLDDMLSMGLK 487

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           PD  T N+L+D  C  GRI     LF  M+SK  + D  + NI+
Sbjct: 488 PDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 250/489 (51%), Gaps = 30/489 (6%)

Query: 63  NEAVYFFDCMI--KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           + A+ F++C +  K   SP + SF +++  + K    D  + +F+ +      PD+F   
Sbjct: 168 HRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYC 227

Query: 121 LLINCLCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
            L++ LCK      A ++L  + +  CF P++VTFN LINGLC +G ++   +L   + +
Sbjct: 228 TLMDGLCKEDRIDEAVLLLDEMQIEGCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFL 286

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             C PN VT+NT+INGLC       A+ L + MV    + C P+ VTY ++I+GL K G 
Sbjct: 287 KGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV---ASKCVPNDVTYGTLINGLVKQGR 343

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
                 LL  +++R  + N   Y++LI G    +  +EA  L+ +M++ G QP++V ++A
Sbjct: 344 SVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSA 403

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  C++GK+D+   +L  M+ +G  P+  TY+SL+ GF   G   +A  ++  M    
Sbjct: 404 LIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN 463

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  +   Y++LI+  C+D K+ +A+ ++  ML   +RP V+ Y++++ GL   G++   L
Sbjct: 464 CVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGL 523

Query: 420 KLIDKM--QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           KL ++M  Q +D  PD  T+   +  LCK   +  A+ +  ++ +  C   + T N  +N
Sbjct: 524 KLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLN 583

Query: 478 G---------------------LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
                                 L K  R+  A K+   +  K   P+  T   +I  LCK
Sbjct: 584 ALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 643

Query: 517 EGQMDKAND 525
             ++    D
Sbjct: 644 PKKVQAIID 652



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 263/511 (51%), Gaps = 21/511 (4%)

Query: 67  YFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN---LL 122
           Y F    +M     G ++F  L+   A +  + T+  +F R+        +F+     L+
Sbjct: 65  YIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRE---RRVFIEKNFILV 121

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTV-TFNFLINGLCAEGRIMEAARLFK-----K 176
                K  +   A  + GR++       TV +FN ++N +  EG    A   ++     K
Sbjct: 122 FRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGK 181

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
            N+    PNV++FN +I  +C+      A+++F EM  +    C+PDV TY +++DGLCK
Sbjct: 182 TNI---SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQ---KCEPDVFTYCTLMDGLCK 235

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +  +D+A  LL +M+     P+ +T+N LI G C   D      L   M   G  P+ VT
Sbjct: 236 EDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVT 295

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +IN  C  GK+DK   LL+ M+     P+ VTY +L++G    GR      L  S+ 
Sbjct: 296 YNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 355

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +G   + Y+Y+ LI+   K++K E+A+ L+++M+ +  +P+++ Y+ L+ GL + G L 
Sbjct: 356 ERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 415

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +++ +M      P++FT+++ I G  K G   +A++V++ +    C      Y+ LI
Sbjct: 416 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 475

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM--EAKN 534
           +GLC+ G+L+ A  ++  +  +G  PDVV  S+MIH LC  G ++    L  +M  +  +
Sbjct: 476 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESD 535

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             P  VT+  LLR   + N  S  + LL+ M
Sbjct: 536 SQPDVVTYNILLRALCKQNSISHAIDLLNSM 566



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 264/509 (51%), Gaps = 27/509 (5%)

Query: 119 LNLLINCLCKMGITSGA--FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            N ++N + + G+   A  F   G   ++  +PN ++FN +I  +C  G +  A  +F++
Sbjct: 154 FNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 213

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           + +  C+P+V T+ TL++GLC+      A+ L +EM  E    C P  VT+N +I+GLCK
Sbjct: 214 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEG---CFPSSVTFNVLINGLCK 270

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G + +  +L+  M  +   PN +TYN++I G C      +A  L   M+ +   P+ VT
Sbjct: 271 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 330

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +IN   K G+      LL  + +RG + +   Y++L+ G     +   A  L+  MV
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 390

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KGC+ ++  Y+ LI+  C++ K+++A  +  EM+++   P+  TY++L+ G F+ GN  
Sbjct: 391 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 450

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A+++  +M  N+ VP+   ++  I GLC++G + EA+ ++  +        +  Y+ +I
Sbjct: 451 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 510

Query: 477 NGLCKMGRLKTACKLFHRL--QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +GLC  G ++   KLF+ +  Q     PDVVT + ++  LCK+  +  A DLL  M  + 
Sbjct: 511 HGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 570

Query: 535 CVPSEVT---FCTLLRGFV---QNNKK--SKVVVLLHK------------MAAEKLVVSD 574
           C P  +T   F   LR  +   Q+ ++   ++VV LHK            +  +K +  +
Sbjct: 571 CNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPN 630

Query: 575 LSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
            S   +++  L K KK +  +++    LF
Sbjct: 631 ASTWERIIPELCKPKKVQAIIDKCWSSLF 659



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 203/382 (53%), Gaps = 4/382 (1%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL--QMKDRNINPNVITY 262
           A++LF  MV+EF   C+  V ++NS+++ + ++G   +A E          NI+PNV+++
Sbjct: 134 AIELFGRMVDEFQ--CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 191

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N +I   C +     A  +F EM     +PDV T+  +++  CK+ ++D+   LL+ M  
Sbjct: 192 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 251

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G  P +VT+N L++G C  G + R  +L  +M  KGC  +  +YN +IN  C   K++ 
Sbjct: 252 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDK 311

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           AV L   M++ +  P+ +TY TL++GL + G   D + L+  ++      + + ++T I 
Sbjct: 312 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 371

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GL K     EA+ +++ +    C+  I  Y+ LI+GLC+ G+L  A ++   + +KG  P
Sbjct: 372 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTP 431

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           +  T S++I    K G   KA  +  +M   NCVP+E+ +  L+ G  ++ K  + +++ 
Sbjct: 432 NAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 491

Query: 563 HKMAAEKLVVSDLSLSSKVVDL 584
             M    L    ++ SS +  L
Sbjct: 492 THMLGRGLRPDVVAYSSMIHGL 513



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 132/254 (51%), Gaps = 13/254 (5%)

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE-RIRP 397
           F +  R+ R R +F+            ++ ++  A  K    E A+ L+  M+ E + R 
Sbjct: 100 FQVFDRMKRERRVFIEK----------NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRR 149

Query: 398 SVITYNTLLSGLFQVGNLGDALKLID--KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
           +V ++N++L+ + Q G    AL+  +       ++ P+  +F   I  +CK G V  A++
Sbjct: 150 TVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIE 209

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           VF+ +   KCE  + TY  L++GLCK  R+  A  L   +Q +G  P  VT + +I+ LC
Sbjct: 210 VFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLC 269

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           K+G M +   L+ +M  K CVP+EVT+ T++ G     K  K V LL +M A K V +D+
Sbjct: 270 KKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDV 329

Query: 576 SLSSKVVDLLSKDK 589
           +  + +  L+ + +
Sbjct: 330 TYGTLINGLVKQGR 343



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 139/282 (49%), Gaps = 21/282 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S EA+  +  M++    P +  ++ L+  L +  + D    +   + + G  P+ F  + 
Sbjct: 379 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 438

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI    K G +  A  V   + ++   PN + ++ LI+GLC +G++ EA  ++  +    
Sbjct: 439 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 498

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+VV ++++I+GLC   +  V LKLF EM+ +  +  +PDVVTYN ++  LCK   + 
Sbjct: 499 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQ-ESDSQPDVVTYNILLRALCKQNSIS 557

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP--DVVTF-N 298
            A +LL  M DR  NP++IT N                 +F+  +   + P  D   F +
Sbjct: 558 HAIDLLNSMLDRGCNPDLITCN-----------------IFLNALREKLNPPQDGREFLD 600

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            ++    K  ++    +++E+M+Q+ + P+  T+  ++   C
Sbjct: 601 ELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELC 642


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/479 (30%), Positives = 245/479 (51%), Gaps = 6/479 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+     P +   T L+     ++  D    +   L  +G  PD+F  N +I+  CK   
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANR 59

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFN 190
              A  VL R+ R  F+P+ VT N +I   C +G+I  A ++F++L     C P ++T+ 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
            LI           ALKL +EM++      +PD  TYN I  GLCK+G VD+A E +  +
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRG---LEPDTFTYNVITRGLCKEGKVDRAFEFVRTL 176

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
             R   P+VITYN L+        W E +    E+   G +P+VVT++ +I+  C+DGK+
Sbjct: 177 NSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKI 236

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           ++   L+++M ++G+ PD   Y+ L+  FC  G++  A E    M+  G   D+ +YN +
Sbjct: 237 EESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTI 296

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           + A CK+   + AV ++ ++      P+V +YNT+LS L+  G+   AL +I +M    +
Sbjct: 297 MAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGI 356

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD  T+ + I  LC++G V EA+ +   + + + +  I +Y  ++ GLCK  R+  A +
Sbjct: 357 DPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIE 416

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           +   +   G  P+  T + +I  +   G   +A +L   +   N + SE +F  L + F
Sbjct: 417 VLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAI-SEDSFKRLNKTF 474



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 214/420 (50%), Gaps = 5/420 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           + P+ +    LI G      I +A R+   L      P+V  +N +I+G C+      A 
Sbjct: 6   YQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAK 64

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSL 265
            + + M  +  +   PDVVT+N +I   C  G +D A ++  ++ KD N  P +ITY  L
Sbjct: 65  TVLDRMKRKGFS---PDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTIL 121

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I  +       EA  L  EM+  G++PD  T+N +    CK+GK+D+    +  +  RG 
Sbjct: 122 IEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGC 181

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PD +TYN L+      G+     +    + S+GC  +V +Y+ILI++ C+D K+E++V 
Sbjct: 182 KPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVN 241

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L + M  + + P    Y+ L++   + G L  A++ +D M  +  +PD   + T +  LC
Sbjct: 242 LVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALC 301

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           KNG    AV++F  +    C   + +YN +++ L   G    A  +  ++  KG  PDV+
Sbjct: 302 KNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVI 361

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T +++I  LC++G +D+A  LL DM +    P+ V++ T+L G  + ++    + +L  M
Sbjct: 362 TYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAM 421



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 188/383 (49%), Gaps = 3/383 (0%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           +PDV+    +I G      +DKA  ++  + +++  P+V  YN++I GFC  +  + AK 
Sbjct: 7   QPDVILCTKLIKGFFNSRNIDKATRVM-GILEKHGKPDVFAYNAVISGFCKANRIESAKT 65

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE-LMIQRGVNPDTVTYNSLMDGF 339
           +   M   G  PDVVT N MI   C  GK+D   ++ E L+      P  +TY  L++ +
Sbjct: 66  VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
            L G I  A +L   M+S+G   D ++YN++    CK+ KV+ A    R + S   +P V
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDV 185

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           ITYN LL  L   G   +  K + ++      P+  T++  I  LC++G + E+V + + 
Sbjct: 186 ITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKV 245

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           ++          Y+ LI   C+ G+L  A +    +   G +PD+V  +T++  LCK G 
Sbjct: 246 MKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGN 305

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            D A ++   ++   C P+  ++ T+L     +  + + + ++ +M + K +  D+   +
Sbjct: 306 GDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLS-KGIDPDVITYN 364

Query: 580 KVVDLLSKDKKYRECLNQFRHLL 602
            ++  L +D    E +     +L
Sbjct: 365 SLISCLCRDGMVDEAIGLLADML 387



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 163/332 (49%), Gaps = 13/332 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+   D M+     P   ++ ++   L K  + D      + LNS G  PD+   N+L
Sbjct: 132 DEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNIL 191

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  L   G        +  I      PN VT++ LI+ LC +G+I E+  L K +     
Sbjct: 192 LRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGL 251

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGF 239
            P+   ++ LI   CR     +A++  + M      IC    PD+V YN+I+  LCK+G 
Sbjct: 252 TPDAYCYDPLIAAFCREGKLDMAIEFLDCM------ICDGFLPDIVNYNTIMAALCKNGN 305

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
            D A E+  ++ +    PNV +YN+++       D   A  +  +M+  G+ PDV+T+N+
Sbjct: 306 GDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNS 365

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  C+DG +D+   LL  M+     P+ V+Y +++ G C   RI  A E+  +M+  G
Sbjct: 366 LISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENG 425

Query: 360 CRHDVYSYNILIN----ANCKDQKVEDAVCLY 387
           C+ +  +Y +LI     +  + Q +E A  LY
Sbjct: 426 CQPNETTYTLLIEGIGFSGSRTQAMELANSLY 457



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 144/282 (51%), Gaps = 2/282 (0%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+    QPDV+    +I        +DK  R++ ++ + G  PD   YN+++ GFC   R
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVITYN 403
           I  A+ +   M  KG   DV ++NI+I   C   K++ A+ ++ E+L +   +P++ITY 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            L+      G + +ALKL+D+M    + PD+FT+     GLCK G V  A +  + + + 
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
            C+  + TYN L+  L   G+     K    +  +G  P+VVT S +I  LC++G+++++
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +L+  M+ K   P    +  L+  F +  K    +  L  M
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 2/153 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN   + AV  F  + ++   P ++S+  +L+ L  +      + +  ++ S G+ PD
Sbjct: 302 KNGN--GDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N LI+CLC+ G+   A  +L  +L   F PN V++  ++ GLC   RI +A  +  
Sbjct: 360 VITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLA 419

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
            +    C PN  T+  LI G+  + +   A++L
Sbjct: 420 AMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 147/563 (26%), Positives = 266/563 (47%), Gaps = 74/563 (13%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  +L    K  +  + + +   +  NG+  DL+  N++I+ LCK+  ++ A+++
Sbjct: 262 PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLL 321

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L R+     TP+  ++N LI+G   EG+I  A  +F ++   +  P+V T+  LI+G CR
Sbjct: 322 LKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCR 381

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
              T  A ++  EM  +   + +P  +TY+++++G CK   +  A +L+  ++ R+I+ N
Sbjct: 382 NGRTDEARRVLYEM--QITGV-RPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISIN 438

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              Y  LI GFC + +  +AK +   M+ +G+ PDV+T++A+IN  CK G + +   +L 
Sbjct: 439 RTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILS 498

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG------------------- 359
            M + GV P+ V Y +L+  FC  G    A + FV +   G                   
Sbjct: 499 RMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREG 558

Query: 360 ----------------CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
                              DV S+N +I++ C+   V +A  +Y  M+     P + TY 
Sbjct: 559 MIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYG 618

Query: 404 TLLSGLFQVGN-----------------------------------LGDALKLIDKMQLN 428
           +LL GL Q G+                                   L +AL L +KM   
Sbjct: 619 SLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR 678

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
           +++PD++T+   +DG CK G V+ A+ + Q +           Y CL+NGL   G++K A
Sbjct: 679 NILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAA 738

Query: 489 CKLFHRLQHK-GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
             +F  +  K G   D +  ++M++   K GQ+++   L+ +M      PS  ++  L+ 
Sbjct: 739 SYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMH 798

Query: 548 GFVQNNKKSKVVVLLHKMAAEKL 570
           G+++  + S+ + L   M  E +
Sbjct: 799 GYIKKGQLSRTLYLYRDMVKEGI 821



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 155/606 (25%), Positives = 269/606 (44%), Gaps = 71/606 (11%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+   D M K      + ++ I++  L K K+      L KR+    L PD    N LI+
Sbjct: 283 ALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIH 342

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
                G  + A  +  ++LR    P+  T+  LI+G C  GR  EA R+  ++ +    P
Sbjct: 343 GFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRP 402

Query: 185 NVVTFNTLINGLC---------------RTRNTLVALKLFEEMVNEF---GAICK----- 221
           + +T++ L+NG C               R+R+  +   ++  +++ F   G + K     
Sbjct: 403 SELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQIL 462

Query: 222 ---------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                    PDV+TY+++I+G+CK G + + KE+L +M+   + PN + Y +L+  FC  
Sbjct: 463 KCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKA 522

Query: 273 DDWKEAKCLFIEMMDNG-----------------------------------VQPDVVTF 297
              KEA   F+++  +G                                   +  DV +F
Sbjct: 523 GHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASF 582

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +I+  C+ G + +   + + M++ G  PD  TY SL+ G C  G + +A+E  V ++ 
Sbjct: 583 NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 642

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           K C  D  + N L+   CK   +++A+ L  +M++  I P   TY  LL G  + G +  
Sbjct: 643 KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVP 702

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE--TYNCL 475
           AL L+  M    +VPD+  +   ++GL   G V  A  +FQ I  CK  L  +   YN +
Sbjct: 703 ALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEII-CKEGLYADCIAYNSM 761

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           +NG  K G++    +L   +      P   + + ++H   K+GQ+ +   L  DM  +  
Sbjct: 762 MNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGI 821

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            P  VT+  L+ G  +       V  L KM  E +   +L+    ++   S+  K    L
Sbjct: 822 KPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDI-LIKAFSEKSKMSNAL 880

Query: 596 NQFRHL 601
             F ++
Sbjct: 881 QLFSYM 886



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 262/531 (49%), Gaps = 16/531 (3%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFF--DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL 103
           S+   +N   K G +    A  FF  +C  K   +   +   IL  ++  NK     V L
Sbjct: 162 SVDLLVNAYVKEGKVLDAAAAIFFMDECGFK---ASLFSCNNILNALVGINK--SEYVWL 216

Query: 104 FKRLNSNGLFP-DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           F + + +  FP D+   N+++N LC  G  S A  +L + +++C  PN VT+N ++N   
Sbjct: 217 FLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQK-MKNCRLPNAVTYNTILNWYV 275

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM--VNEFGAIC 220
            +GR   A R+   +     + ++ T+N +I+ LC+ + +  A  L + M  VN      
Sbjct: 276 KKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVN-----L 330

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PD  +YN++I G   +G ++ A  +  QM  +++ P+V TY +LI G+C      EA+ 
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARR 390

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +  EM   GV+P  +T++A++N  CK  K+     L++ +  R ++ +   Y  L+DGFC
Sbjct: 391 VLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFC 450

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
            +G +S+A+++   M++ G   DV +Y+ LIN  CK   + +   +   M    + P+ +
Sbjct: 451 QLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNV 510

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y TL+    + G+  +ALK    +  + +V +S      +    + G + EA Q  Q +
Sbjct: 511 LYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYM 570

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
              K    + ++NC+I+  C+ G +  A  ++  +   G  PD+ T  +++  LC+ G +
Sbjct: 571 SRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHL 630

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +A + ++ +  K C   E T  TLL G  ++    + + L  KM    ++
Sbjct: 631 VQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNIL 681



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 250/539 (46%), Gaps = 55/539 (10%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A     CM+     P + +++ L+  + K         +  R+  +G+ P+  +   L
Sbjct: 456 SKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTL 515

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +   CK G    A      I RS    N+V  N L+     EG I EA +  + ++    
Sbjct: 516 VFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKI 575

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +V +FN +I+  C+  N L A  +++ MV        PD+ TY S++ GLC+ G + +
Sbjct: 576 SFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWP---PDICTYGSLLRGLCQGGHLVQ 632

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AKE ++ + ++    +  T N+L+ G C      EA  L  +M+   + PD  T+  +++
Sbjct: 633 AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 692

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC-- 360
             CK GK+     LL++M+++G+ PDT+ Y  L++G    G++  A  +F  ++ K    
Sbjct: 693 GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLY 752

Query: 361 ------------------------------RHDVY----SYNILINANCKDQKVEDAVCL 386
                                          ++VY    SYNIL++   K  ++   + L
Sbjct: 753 ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYL 812

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           YR+M+ E I+P  +TY  L+ GL + G +  A+K ++KM L  V PD+  F   I    +
Sbjct: 813 YRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSE 872

Query: 447 NGFVLEAVQVFQAIR-----NCKCELRIE-----------TYNCLINGLCKMGRLKTACK 490
              +  A+Q+F  ++     +   EL+ +             + ++ GLCK G+++ A  
Sbjct: 873 KSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAII 932

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           +F  +   G +P + T +T++H LCKE ++D A  L   ME+       VT+  L+ G 
Sbjct: 933 VFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGL 991



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 234/473 (49%), Gaps = 26/473 (5%)

Query: 90   MLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP 149
            M+A+ +Q+   +S  K      +  D+   N +I+  C+ G    AF V   ++R  + P
Sbjct: 559  MIAEAEQFKQYMSRMK------ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPP 612

Query: 150  NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
            +  T+  L+ GLC  G +++A      L   AC  +  T NTL+ G+C+      AL L 
Sbjct: 613  DICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLC 672

Query: 210  EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            E+MV        PD  TY  ++DG CK G V  A  LL  M ++ + P+ I Y  L+ G 
Sbjct: 673  EKMVTRN---ILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGL 729

Query: 270  CCVDDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
                  K A  +F E++   G+  D + +N+M+N   K G+++++ RL+  M +  V P 
Sbjct: 730  VNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPS 789

Query: 329  TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            + +YN LM G+   G++SR   L+  MV +G + D  +Y +LI   C+   +E AV    
Sbjct: 790  SASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLE 849

Query: 389  EMLSERIRPSVITYNTLLSGLFQ----------------VGNLGDALKLIDKMQLNDVVP 432
            +M+ E + P  + ++ L+    +                VG++  A +L + M+   VVP
Sbjct: 850  KMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVP 909

Query: 433  DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
                 ++ + GLCK G V EA+ VF +I        I T+  L++GLCK  ++  A  L 
Sbjct: 910  SEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLK 969

Query: 493  HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
              ++  G   DVVT + +I  LC +  +  A DL  +M++K  +P+  T+ TL
Sbjct: 970  QLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITL 1022



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 216/422 (51%), Gaps = 6/422 (1%)

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
           S  F  L R +  C   N  + + L+N    EG++++AA     ++      ++ + N +
Sbjct: 142 SAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNI 201

Query: 193 INGLCR-TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +N L    ++  V L L E +  +F      DV T N +++ LC  G + KA+ +L +MK
Sbjct: 202 LNALVGINKSEYVWLFLKESLDRKFPL----DVTTCNIVLNSLCTQGKLSKAESMLQKMK 257

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           +  + PN +TYN+++  +      K A  +  +M  NG++ D+ T+N MI+  CK  +  
Sbjct: 258 NCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSA 316

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   LL+ M +  + PD  +YN+L+ GF   G+I+ A  +F  M+ +  +  V +Y  LI
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALI 376

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  C++ + ++A  +  EM    +RPS +TY+ LL+G  +   LG AL LI  ++   + 
Sbjct: 377 DGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSIS 436

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            +   +   IDG C+ G V +A Q+ + +     +  + TY+ LING+CKMG +    ++
Sbjct: 437 INRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEI 496

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
             R+Q  G +P+ V  +T++ + CK G   +A    +D+     V + V    LL  F +
Sbjct: 497 LSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYR 556

Query: 552 NN 553
             
Sbjct: 557 EG 558



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 196/421 (46%), Gaps = 26/421 (6%)

Query: 61   TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
            T +EA+   + M+     P   ++TILL    K  +    + L + +   GL PD     
Sbjct: 664  TLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYT 723

Query: 121  LLINCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
             L+N L   G    A  +   I+ +     + + +N ++NG    G+I E  RL + ++ 
Sbjct: 724  CLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHE 783

Query: 180  FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
                P+  ++N L++G  +       L L+ +MV E     KPD VTY  +I GLC+ G 
Sbjct: 784  NEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG---IKPDNVTYRLLIFGLCEYGL 840

Query: 240  VDKAKELLLQMKDRNINPNVITYNSLICGFC----------------CVDDWKEAKCLFI 283
            ++ A + L +M    + P+ + ++ LI  F                  V D   A  L  
Sbjct: 841  IEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKE 900

Query: 284  EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
            +M   GV P  V  ++++   CK GK+++   +   +++ G+ P   T+ +LM G C   
Sbjct: 901  DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEF 960

Query: 344  RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            +I  A  L   M S G + DV +YN+LI   C  + + DA+ LY EM S+ + P++ TY 
Sbjct: 961  KIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYI 1020

Query: 404  TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            TL   ++  G + D  KL+  ++   +VP S+     ++   +N     A++    IRNC
Sbjct: 1021 TLTGAMYATGTMQDGEKLLKDIEDRGIVP-SYKHPESLEWRMEN-----AIKRLNTIRNC 1074

Query: 464  K 464
            +
Sbjct: 1075 R 1075



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 117/245 (47%), Gaps = 1/245 (0%)

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++ +   G++  A      M   G +  ++S N ++NA     K E      +E L  +
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
               V T N +L+ L   G L  A  ++ KM+ N  +P++ T+ T ++   K G    A+
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK-NCRLPNAVTYNTILNWYVKKGRCKSAL 284

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           ++   +     E  + TYN +I+ LCK+ R   A  L  R++     PD  + +T+IH  
Sbjct: 285 RILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGF 344

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
             EG+++ A  +   M  ++  PS  T+  L+ G+ +N +  +   +L++M    +  S+
Sbjct: 345 FGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSE 404

Query: 575 LSLSS 579
           L+ S+
Sbjct: 405 LTYSA 409


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 245/476 (51%), Gaps = 4/476 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + SF  +LT L K ++ D  ++LF+ +  +   P+    N++I+ LC  G    A+++
Sbjct: 355 PSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAE-PNSSTYNIIIDMLCMAGKVEEAYMI 413

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +  +   PN +T N +++ LC   +   A  +F+  +   C+PN VT+ +LI+GL +
Sbjct: 414 RDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGK 473

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             N   A +LFE M++  G    P  V Y S+I      G  +   ++  +M  R   P+
Sbjct: 474 KGNVDDAYRLFENMLDT-GHNANP--VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPD 530

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           +   N+ +       D ++ + +F ++   G  PDV +++ +I+   K G+  + + +  
Sbjct: 531 LTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFH 590

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M Q+G   D   YN+++DGFC  G++ +A E+   M  K     V +Y  +I+   K  
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKID 650

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           ++++A  L+ E  S+ I  +VI Y++L+ G  +VG + +A  ++++M    + P+ +T+ 
Sbjct: 651 RLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 710

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + +D L K   + EA+  FQ+++  KC     TY+ LINGLC++ +   A   +  +Q +
Sbjct: 711 SLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ 770

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           G +P+VVT +TMI  L K G +  A  L    +A    P   +F  L+ G    N+
Sbjct: 771 GLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANR 826



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 233/497 (46%), Gaps = 74/497 (14%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F+ M K    P  +++ I++ ML    + +    +   +   GLFP+L  +N++
Sbjct: 374 DEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIM 432

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE------------------ 164
           ++ LCK      A+ +     +    PN+VT+  LI+GL  +                  
Sbjct: 433 VDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGH 492

Query: 165 -----------------GRIMEAARLFKKLNVFACDPNVVTFNT---------------- 191
                            GR  +  ++FK++N   C P++   NT                
Sbjct: 493 NANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRA 552

Query: 192 -------------------LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
                              LI+GL +         +F  M  +  A+   D   YN+++D
Sbjct: 553 IFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFAL---DARAYNAVVD 609

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G CK G +DKA E+L +MK + + P V TY S+I G   +D   EA  LF E    G++ 
Sbjct: 610 GFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIEL 669

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +V+ ++++I+   K G++D+   +LE M+++G+ P+  T+NSLMD       I+ A   F
Sbjct: 670 NVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICF 729

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
            SM    C  + Y+Y+ILIN  C+ QK   A   ++EM  + + P+V+TY T+++GL +V
Sbjct: 730 QSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKV 789

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           GN+ DA  L ++ + N   PD+ +F   I+G+      +EA  VF+  R   C + ++  
Sbjct: 790 GNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKAC 849

Query: 473 NCLINGLCKMGRLKTAC 489
             L++ L K   L+ A 
Sbjct: 850 ISLLDALNKAECLEQAA 866



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/542 (26%), Positives = 247/542 (45%), Gaps = 39/542 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P +  + + +    K    D     F  L S GL PD      +I  LCK G  S A  
Sbjct: 249 EPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEE 308

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           + G++      P    +N +I G  + G+   A +L  +L    C P+VV+FN+++  L 
Sbjct: 309 LFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLG 368

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + R    AL LFE M  +     +P+  TYN IID LC  G V++A  +  +M+   + P
Sbjct: 369 KKRKVDEALTLFEAMKKD----AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFP 424

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N++T N ++   C    ++ A  +F      G  P+ VT+ ++I+   K G +D   RL 
Sbjct: 425 NLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLF 484

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR---------------- 361
           E M+  G N + V Y SL+  F + GR     ++F  M  +GC+                
Sbjct: 485 ENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKA 544

Query: 362 -------------------HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
                               DV SY+ILI+   K  +  +   ++  M  +        Y
Sbjct: 545 GDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAY 604

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N ++ G  + G L  A +++++M++  V P   T+ + IDGL K   + EA  +F+  ++
Sbjct: 605 NAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 664

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              EL +  Y+ LI+G  K+GR+  A  +   +  KG  P+V T ++++  L K  ++++
Sbjct: 665 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINE 724

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A      M+   C P+  T+  L+ G  +  K +K  V   +M  + LV + ++ ++ + 
Sbjct: 725 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIA 784

Query: 583 DL 584
            L
Sbjct: 785 GL 786



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 254/525 (48%), Gaps = 5/525 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A      M ++K  P  +++T+L+  +A+ +Q +  + L +++   G    + +   L
Sbjct: 164 DDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTL 223

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  L + G   GA  ++  +  SC  P+ V +N  I+     G +  A + F +L     
Sbjct: 224 VRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGL 283

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ V++ ++I  LC+      A +LF +M  E    C      YN++I G    G  + 
Sbjct: 284 KPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPC---AYAYNTMIMGYGSAGQFEN 340

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL Q+K+R   P+V+++NS++          EA  LF E M    +P+  T+N +I+
Sbjct: 341 AYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEPNSSTYNIIID 399

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C  GK+++   + + M   G+ P+ +T N ++D  C   +   A E+F +   +GC  
Sbjct: 400 MLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNP 459

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  +Y  LI+   K   V+DA  L+  ML      + + Y +L+   F  G   D  K+ 
Sbjct: 460 NSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIF 519

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M      PD     TY+D + K G V +   +F+ I+       + +Y+ LI+GL K 
Sbjct: 520 KEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKA 579

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G+ +    +FH ++ +G   D    + ++   CK G++DKA ++L +M+ K   P+  T+
Sbjct: 580 GQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATY 639

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            +++ G  + ++  +  +L  + A  K +  ++ + S ++D   K
Sbjct: 640 GSIIDGLAKIDRLDEAYMLFEE-AKSKGIELNVIVYSSLIDGFGK 683



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/482 (23%), Positives = 210/482 (43%), Gaps = 45/482 (9%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           L++ L    R+ +A R+   +      P    +  LI  +   R    AL+L  +M  E 
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQM-QEV 211

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
           G   +  V  + +++  L ++G V+ A  L+ ++K   + P+++ YN  I  F    +  
Sbjct: 212 G--YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVD 269

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
            A   F E+   G++PD V++ +MI   CK G++ +   L   M      P    YN+++
Sbjct: 270 MAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMI 329

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            G+   G+   A +L   +  +GC   V S+N ++    K +KV++A+ L+ E + +   
Sbjct: 330 MGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAE 388

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQ----------LNDVV--------------- 431
           P+  TYN ++  L   G + +A  + D+M+          +N +V               
Sbjct: 389 PNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEM 448

Query: 432 ----------PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
                     P+S T+ + IDGL K G V +A ++F+ + +         Y  LI     
Sbjct: 449 FETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFM 508

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            GR +   K+F  +  +G  PD+   +T +  + K G ++K   +  D++    +P   +
Sbjct: 509 HGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS 568

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK----DKKYRECLNQ 597
           +  L+ G  +  +  +   + H M  +   + D    + VVD   K    DK Y E L +
Sbjct: 569 YSILIHGLTKAGQARETSSIFHAMKQQGFAL-DARAYNAVVDGFCKSGKLDKAY-EVLEE 626

Query: 598 FR 599
            +
Sbjct: 627 MK 628



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 135/299 (45%), Gaps = 4/299 (1%)

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            +NA++ +   D  +  + ++LE M   G          L+       R+  A  +  +M
Sbjct: 116 AYNAVLPFLSHD--LAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAM 173

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
                R    +Y +LI A  + ++ E A+ L R+M        V  + TL+  L + G +
Sbjct: 174 RRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRV 233

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             AL L+D+++ + + PD   +   ID   K G V  A + F  +++   +    +Y  +
Sbjct: 234 EGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSM 293

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I  LCK GRL  A +LF +++ +  +P     +TMI      GQ + A  LL  ++ + C
Sbjct: 294 IWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGC 353

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           +PS V+F ++L    +  K  + + L   M  +K    + S  + ++D+L    K  E 
Sbjct: 354 IPSVVSFNSILTCLGKKRKVDEALTLFEAM--KKDAEPNSSTYNIIIDMLCMAGKVEEA 410


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 153/508 (30%), Positives = 269/508 (52%), Gaps = 18/508 (3%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLC 127
           FD M+K+  S  + +F +L+       + +  + + +R+ S   + PD    N ++  + 
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS 251

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA---ARLFKKLNVFACDP 184
           K G  S    +L  + ++   PN VT+N L+ G C  G + EA     L K+ NV    P
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL---P 308

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           ++ T+N LINGLC   +    L+L + M +      +PDVVTYN++IDG  + G   +A+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKS---LKLQPDVVTYNTLIDGCFELGLSLEAR 365

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI-EMMD-NGVQPDVVTFNAMIN 302
           +L+ QM++  +  N +T+N +   + C ++ +EA    + E++D +G  PD+VT++ +I 
Sbjct: 366 KLMEQMENDGVKANQVTHN-ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G +     ++  M Q+G+  +T+T N+++D  C   ++  A  L  S   +G   
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +Y  LI    +++KVE A+ ++ EM   +I P+V T+N+L+ GL   G    A++  
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC--LINGLC 480
           D++  + ++PD  TF + I G CK G V +A + +    + K   + + Y C  L+NGLC
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN--ESIKHSFKPDNYTCNILLNGLC 602

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G  + A   F+ L  +  + D VT +TMI   CK+ ++ +A DLL +ME K   P   
Sbjct: 603 KEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRF 661

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+ + +   +++ K S+   LL K + +
Sbjct: 662 TYNSFISLLMEDGKLSETDELLKKFSGK 689



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 247/522 (47%), Gaps = 43/522 (8%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC---AEGRIMEA 170
           P   + ++ ++     G    A  +  +++R    PN +T N L+ GL    +   I  A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             +F  +       NV TFN L+NG C       AL + E MV+EF     PD VTYN+I
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK--VNPDNVTYNTI 246

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           +  + K G +   KELLL MK   + PN +TYN+L+ G+C +   KEA  +   M    V
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            PD+ T+N +IN  C  G M +   L++ M    + PD VTYN+L+DG   +G    AR+
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGL 409
           L   M + G + +  ++NI +   CK++K E      +E++      P ++TY+TL+   
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN----------------GFVLE- 452
            +VG+L  AL+++ +M    +  ++ T  T +D LCK                 GF+++ 
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486

Query: 453 ------------------AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
                             A++++  ++  K    + T+N LI GLC  G+ + A + F  
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           L   G +PD  T +++I   CKEG+++KA +   +    +  P   T   LL G  +   
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
             K +   + +  E+ V  D    + ++    KDKK +E  +
Sbjct: 607 TEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYD 646



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 233/522 (44%), Gaps = 93/522 (17%)

Query: 63  NEAVYFFDCMI-KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            +A+   + M+ + K +P   ++  +L  ++K  +   +  L   +  NGL P+    N 
Sbjct: 221 EDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+   CK+G    AF ++  + ++   P+  T+N LINGLC  G + E   L   +    
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------FGAICK-------- 221
             P+VVT+NTLI+G      +L A KL E+M N+               +CK        
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400

Query: 222 -------------PDVVTY-----------------------------------NSIIDG 233
                        PD+VTY                                   N+I+D 
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK+  +D+A  LL     R    + +TY +LI GF   +  ++A  ++ EM    + P 
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           V TFN++I   C  GK +      + + + G+ PD  T+NS++ G+C  GR+ +A E + 
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
             +    + D Y+ NIL+N  CK+   E A+  +  ++ ER     +TYNT++S   +  
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDK 639

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR----NCKCELRI 469
            L +A  L+ +M+   + PD FT+ ++I  L ++G + E  ++ +       + K +L++
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQV 699

Query: 470 ET-------------------YNCLINGLCKMGRLKTACKLF 492
           ET                   Y+ +I+ LC  GRLK   + +
Sbjct: 700 ETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSY 741


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 250/489 (51%), Gaps = 30/489 (6%)

Query: 63  NEAVYFFDCMI--KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           + A+ F++C +  K   SP + SF +++  + K    D  + +F+ +      PD+F   
Sbjct: 152 HRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYC 211

Query: 121 LLINCLCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
            L++ LCK      A ++L  + +  CF P++VTFN LINGLC +G ++   +L   + +
Sbjct: 212 TLMDGLCKEDRIDEAVLLLDEMQIEGCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFL 270

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             C PN VT+NT+INGLC       A+ L + MV    + C P+ VTY ++I+GL K G 
Sbjct: 271 KGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV---ASKCVPNDVTYGTLINGLVKQGR 327

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
                 LL  +++R  + N   Y++LI G    +  +EA  L+ +M++ G QP++V ++A
Sbjct: 328 SVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSA 387

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  C++GK+D+   +L  M+ +G  P+  TY+SL+ GF   G   +A  ++  M    
Sbjct: 388 LIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN 447

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  +   Y++LI+  C+D K+ +A+ ++  ML   +RP V+ Y++++ GL   G++   L
Sbjct: 448 CVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGL 507

Query: 420 KLIDKM--QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           KL ++M  Q +D  PD  T+   +  LCK   +  A+ +  ++ +  C   + T N  +N
Sbjct: 508 KLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLN 567

Query: 478 G---------------------LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
                                 L K  R+  A K+   +  K   P+  T   +I  LCK
Sbjct: 568 ALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 627

Query: 517 EGQMDKAND 525
             ++    D
Sbjct: 628 PKKVQAIID 636



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 149/496 (30%), Positives = 258/496 (52%), Gaps = 18/496 (3%)

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG--LFPDLFVLNLLINCLCKMGITSGAFV 137
           G ++F  L+   A +  + T+  +F R+           F+L  +     K  +   A  
Sbjct: 63  GDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFIL--VFRAYGKAHLPEKAIE 120

Query: 138 VLGRILRSCFTPNTV-TFNFLINGLCAEGRIMEAARLFK-----KLNVFACDPNVVTFNT 191
           + GR++       TV +FN ++N +  EG    A   ++     K N+    PNV++FN 
Sbjct: 121 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNI---SPNVLSFNL 177

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I  +C+      A+++F EM  +    C+PDV TY +++DGLCK+  +D+A  LL +M+
Sbjct: 178 VIKAMCKLGLVDRAIEVFREMAIQ---KCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQ 234

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                P+ +T+N LI G C   D      L   M   G  P+ VT+N +IN  C  GK+D
Sbjct: 235 IEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLD 294

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K   LL+ M+     P+ VTY +L++G    GR      L  S+  +G   + Y+Y+ LI
Sbjct: 295 KAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLI 354

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +   K++K E+A+ L+++M+ +  +P+++ Y+ L+ GL + G L +A +++ +M      
Sbjct: 355 SGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCT 414

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P++FT+++ I G  K G   +A++V++ +    C      Y+ LI+GLC+ G+L+ A  +
Sbjct: 415 PNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMM 474

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM--EAKNCVPSEVTFCTLLRGF 549
           +  +  +G  PDVV  S+MIH LC  G ++    L  +M  +  +  P  VT+  LLR  
Sbjct: 475 WTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRAL 534

Query: 550 VQNNKKSKVVVLLHKM 565
            + N  S  + LL+ M
Sbjct: 535 CKQNSISHAIDLLNSM 550



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 264/509 (51%), Gaps = 27/509 (5%)

Query: 119 LNLLINCLCKMGITSGA--FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            N ++N + + G+   A  F   G   ++  +PN ++FN +I  +C  G +  A  +F++
Sbjct: 138 FNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 197

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           + +  C+P+V T+ TL++GLC+      A+ L +EM  E    C P  VT+N +I+GLCK
Sbjct: 198 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEG---CFPSSVTFNVLINGLCK 254

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G + +  +L+  M  +   PN +TYN++I G C      +A  L   M+ +   P+ VT
Sbjct: 255 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 314

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +IN   K G+      LL  + +RG + +   Y++L+ G     +   A  L+  MV
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 374

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            KGC+ ++  Y+ LI+  C++ K+++A  +  EM+++   P+  TY++L+ G F+ GN  
Sbjct: 375 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 434

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            A+++  +M  N+ VP+   ++  I GLC++G + EA+ ++  +        +  Y+ +I
Sbjct: 435 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 494

Query: 477 NGLCKMGRLKTACKLFHRL--QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +GLC  G ++   KLF+ +  Q     PDVVT + ++  LCK+  +  A DLL  M  + 
Sbjct: 495 HGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 554

Query: 535 CVPSEVT---FCTLLRGFV---QNNKK--SKVVVLLHK------------MAAEKLVVSD 574
           C P  +T   F   LR  +   Q+ ++   ++VV LHK            +  +K +  +
Sbjct: 555 CNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPN 614

Query: 575 LSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
            S   +++  L K KK +  +++    LF
Sbjct: 615 ASTWERIIPELCKPKKVQAIIDKCWSSLF 643



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 203/382 (53%), Gaps = 4/382 (1%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL--QMKDRNINPNVITY 262
           A++LF  MV+EF   C+  V ++NS+++ + ++G   +A E          NI+PNV+++
Sbjct: 118 AIELFGRMVDEFQ--CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 175

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N +I   C +     A  +F EM     +PDV T+  +++  CK+ ++D+   LL+ M  
Sbjct: 176 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 235

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G  P +VT+N L++G C  G + R  +L  +M  KGC  +  +YN +IN  C   K++ 
Sbjct: 236 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDK 295

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           AV L   M++ +  P+ +TY TL++GL + G   D + L+  ++      + + ++T I 
Sbjct: 296 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 355

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GL K     EA+ +++ +    C+  I  Y+ LI+GLC+ G+L  A ++   + +KG  P
Sbjct: 356 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTP 415

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           +  T S++I    K G   KA  +  +M   NCVP+E+ +  L+ G  ++ K  + +++ 
Sbjct: 416 NAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 475

Query: 563 HKMAAEKLVVSDLSLSSKVVDL 584
             M    L    ++ SS +  L
Sbjct: 476 THMLGRGLRPDVVAYSSMIHGL 497



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 132/254 (51%), Gaps = 13/254 (5%)

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE-RIRP 397
           F +  R+ R R +F+            ++ ++  A  K    E A+ L+  M+ E + R 
Sbjct: 84  FQVFDRMKRERRVFIEK----------NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRR 133

Query: 398 SVITYNTLLSGLFQVGNLGDALKLID--KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
           +V ++N++L+ + Q G    AL+  +       ++ P+  +F   I  +CK G V  A++
Sbjct: 134 TVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIE 193

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           VF+ +   KCE  + TY  L++GLCK  R+  A  L   +Q +G  P  VT + +I+ LC
Sbjct: 194 VFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLC 253

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           K+G M +   L+ +M  K CVP+EVT+ T++ G     K  K V LL +M A K V +D+
Sbjct: 254 KKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDV 313

Query: 576 SLSSKVVDLLSKDK 589
           +  + +  L+ + +
Sbjct: 314 TYGTLINGLVKQGR 327



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 139/282 (49%), Gaps = 21/282 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S EA+  +  M++    P +  ++ L+  L +  + D    +   + + G  P+ F  + 
Sbjct: 363 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 422

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI    K G +  A  V   + ++   PN + ++ LI+GLC +G++ EA  ++  +    
Sbjct: 423 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 482

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+VV ++++I+GLC   +  V LKLF EM+ +  +  +PDVVTYN ++  LCK   + 
Sbjct: 483 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQ-ESDSQPDVVTYNILLRALCKQNSIS 541

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP--DVVTF-N 298
            A +LL  M DR  NP++IT N                 +F+  +   + P  D   F +
Sbjct: 542 HAIDLLNSMLDRGCNPDLITCN-----------------IFLNALREKLNPPQDGREFLD 584

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            ++    K  ++    +++E+M+Q+ + P+  T+  ++   C
Sbjct: 585 ELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELC 626


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 161/581 (27%), Positives = 273/581 (46%), Gaps = 78/581 (13%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           ++  L K K+ D   S+ +++  +G+ PDLF  +L+I+ LCK      A  VL +++ + 
Sbjct: 251 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 310

Query: 147 FTPNTVTFNFLING-----------------------------------LCAEGRIMEAA 171
             PN++T+N LI+G                                   L   GR  EA 
Sbjct: 311 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 370

Query: 172 RLFKKL--------------------------------NVF------ACDPNVVTFNTLI 193
            +F  +                                N+F         PN   FN LI
Sbjct: 371 CIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILI 430

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           N   R      A+ +FE+M N+ G I  PD VT+ ++I  LC+ G +D A      M D 
Sbjct: 431 NAYARCGMMDKAMLIFEDMQNK-GMI--PDTVTFATVISSLCRIGRLDDALHKFNHMVDI 487

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT-FNAMINYNCKDGKMDK 312
            + P+   Y  LI G C   +  +AK L  EMM+  + P  V  F+++IN  CK+G++ +
Sbjct: 488 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 547

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              ++++M+Q G  P+ VT+NSLM+G+CLVG +  A  L  +M S G   + Y Y  L++
Sbjct: 548 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 607

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             CK+ +++DA+ ++R+ML + ++P+ + Y+ +L GLFQ      A K+  +M  +    
Sbjct: 608 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 667

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
              T+   + GLC+N    EA  + + +     +  I T+N +I+ + K+GR + A +LF
Sbjct: 668 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 727

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +   G +P++ T S MI  L KE   ++A++L + +E             ++R  +  
Sbjct: 728 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 787

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            + +K    L  +    L + + S  S +  L S++ KYRE
Sbjct: 788 AEVAKASNYLSIIGENNLTL-EASTISLLASLFSREGKYRE 827



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 262/551 (47%), Gaps = 43/551 (7%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+    K+ + D    LF  +   G+ P + + N +I  LCKM     A  ++ +++ S 
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+  T++ +I+GLC    + +A R+ +++      PN +T+N+LI+G   +     ++
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN--- 263
           ++F++M +  G I  P V   NS I  L K G  ++AK +   M  +   P++I+Y+   
Sbjct: 336 RVFKQM-SSCGVI--PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNA 392

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S +C +     W     +F  M+  G+ P+   FN +IN   + G MDK   + E M  +
Sbjct: 393 SWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 452

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG---------------CRH------ 362
           G+ PDTVT+ +++   C +GR+  A   F  MV  G               C H      
Sbjct: 453 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 512

Query: 363 ---------------DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
                           V  ++ +IN  CK+ +V +   +   M+    RP+V+T+N+L+ 
Sbjct: 513 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 572

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G   VGN+ +A  L+D M    + P+ + + T +DG CKNG + +A+ VF+ + +   + 
Sbjct: 573 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 632

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
               Y+ +++GL +  R   A K+FH +   G    + T   ++  LC+    D+AN LL
Sbjct: 633 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 692

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
             + A N     +TF  ++    +  ++ +   L   ++   LV +  + S  + +L+ K
Sbjct: 693 EKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI-K 751

Query: 588 DKKYRECLNQF 598
           ++ Y E  N F
Sbjct: 752 EESYEEADNLF 762



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 216/417 (51%), Gaps = 11/417 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVV-----SLF 104
           F++   K G   +NEA   FD M+   P P + S++   + +     Y TVV     ++F
Sbjct: 356 FIHALFKHGR--TNEAKCIFDSMVLKGPKPDIISYSTNASWVC--YWYVTVVWVMWHNIF 411

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
             + + G+ P+  V N+LIN   + G+   A ++   +      P+TVTF  +I+ LC  
Sbjct: 412 NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 471

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           GR+ +A   F  +      P+   +  LI G C     + A +L  EM+N+   I  P V
Sbjct: 472 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK--DIPPPGV 529

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
             ++SII+ LCK+G V + K+++  M      PNV+T+NSL+ G+C V + +EA  L   
Sbjct: 530 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 589

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M   G++P+   +  +++  CK+G++D    +   M+ +GV P +V Y+ ++ G     R
Sbjct: 590 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 649

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
            + A+++F  M+  G    +++Y +++   C++   ++A  L  ++ +  ++  +IT+N 
Sbjct: 650 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 709

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           ++S +F+VG   +A +L D +    +VP+  T++  I  L K     EA  +F ++ 
Sbjct: 710 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 766



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 234/477 (49%), Gaps = 50/477 (10%)

Query: 170 AARLFKKLNVFACD----PNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDV 224
           A  LFK+++ +AC     P + T+N LI+   R     + L +   ++ N  G    PD 
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG----PDD 211

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
            +Y S+I G  KDG VDKA  L L+M ++ + P ++  NS+I   C + +  +A+ +  +
Sbjct: 212 FSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQK 270

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+D+G+ PD+ T++ +I+  CK   MDK  R+LE M++ G  P+++TYNSL+ G+ + G 
Sbjct: 271 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGM 330

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
            + +  +F  M S G    V + N  I+A  K  +  +A C++  M+ +  +P +I+Y+T
Sbjct: 331 WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYST 390

Query: 405 --------------------------------------LLSGLFQVGNLGDALKLIDKMQ 426
                                                 L++   + G +  A+ + + MQ
Sbjct: 391 NASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ 450

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              ++PD+ TFAT I  LC+ G + +A+  F  + +         Y CLI G C  G L 
Sbjct: 451 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELV 510

Query: 487 TACKLFHRLQHKG-PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
            A +L   + +K  P P V   S++I+ LCKEG++ +  D++  M      P+ VTF +L
Sbjct: 511 KAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSL 570

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           + G+       +   LL  MA+   +  +  +   +VD   K+ +  + L  FR +L
Sbjct: 571 MEGYCLVGNMEEAFALLDAMASIG-IEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 626


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 159/578 (27%), Positives = 271/578 (46%), Gaps = 42/578 (7%)

Query: 39  HHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLT------MLA 92
           HH +  T+   +L  R +S                K  P+P + S T          +L 
Sbjct: 27  HHPRQPTAAGGWLPPRLRSSGA-------------KPPPTPRLESPTTRQQQQAPRRLLG 73

Query: 93  KNKQYDTVV------SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
            +++   +V      +  + + S+   PD  + N L+  LC+ G    A  V+G    +C
Sbjct: 74  SDRRLSALVHRGDLDAALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERVVG----AC 129

Query: 147 FTPNTV-TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
               TV  +  L +G C  GR+ +A R+   + V    PN  T+N LI+ LC       A
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGMPV---QPNAYTYNPLIHTLCERGQVRDA 186

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
           L + ++M+      C PDVVTYN +++  CK     +A EL+  M+     PN +TYN L
Sbjct: 187 LSVLDDMLCRG---CAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVL 243

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + G C   D  +A  L   +  +G +P  V +N ++   C   +    + L+  M++   
Sbjct: 244 MDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENC 303

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P+  T+N ++   C  G + +A +L   M   GC  ++ +YN +IN  C+ + V+ A+ 
Sbjct: 304 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMG 363

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L  +M S   +P ++TYNTLL GL       DA +L+D M  N  +PD+ TF T I  LC
Sbjct: 364 LLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLC 423

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           + G +++A++VF+ + +  C     TY+ +I+GL K  +L  A +LF+ + HKG  PD +
Sbjct: 424 QKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI 483

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
               +   L  +  +++A   +  ++     P  V +  +L G  +N K    + ++  M
Sbjct: 484 Y-QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 542

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
            +   +  DL+       +L +   Y   LN+ R LL 
Sbjct: 543 VSSGCMPDDLTYV-----ILIEGLAYEGYLNEARELLI 575



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 205/421 (48%), Gaps = 4/421 (0%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           M   P   ++  L+  L +  Q    +S+   +   G  PD+   N+L+   CK      
Sbjct: 161 MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 220

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  ++  +     TPN VT+N L++G+C EG + +A  L + L    C P+ V +NT++ 
Sbjct: 221 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 280

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           GLC       A +L  EM+ E    C P+  T+N +I  LC+ G + +A +LL +M    
Sbjct: 281 GLCSAERWGDADELVTEMLREN---CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 337

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
              N++TYN++I G C   +   A  L  +M   G +PD+VT+N ++   C   +     
Sbjct: 338 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAE 397

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L++ M Q G  PD VT+N+L+   C  G +  A E+F  M  KGC  +  +Y+ +I+  
Sbjct: 398 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 457

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K  K++ A+ L+ EM  +   P  I Y  L   L     + +A++ + K+Q + + P +
Sbjct: 458 AKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHT 516

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             +   + GLC+NG    A+ +   + +  C     TY  LI GL   G L  A +L  +
Sbjct: 517 VLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIK 576

Query: 495 L 495
           L
Sbjct: 577 L 577



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 181/372 (48%), Gaps = 4/372 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M     +P   ++ +L+  +      D  + L + L S+G  P     N ++
Sbjct: 220 QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 279

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC       A  ++  +LR    PN  TFN +I  LC +G + +A +L +K++   C 
Sbjct: 280 KGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 339

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            N+VT+N +INGLC  RN   A+ L  +M   +G  CKPD+VTYN+++ GLC       A
Sbjct: 340 ANIVTYNAIINGLCEQRNVDGAMGLLSKM-KSYG--CKPDIVTYNTLLKGLCSAAQWVDA 396

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +EL+  M      P+ +T+N+LI   C      +A  +F +M D G  P+ +T++ +I+ 
Sbjct: 397 EELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISG 456

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K  K+D+   L   M  +G NPD + Y  L +       I  A +    +   G    
Sbjct: 457 LAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPH 515

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              YN ++   C++ K E A+ +   M+S    P  +TY  L+ GL   G L +A +L+ 
Sbjct: 516 TVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLI 575

Query: 424 KMQLNDVVPDSF 435
           K+   DV+ +S 
Sbjct: 576 KLCSRDVLVNSL 587


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 157/532 (29%), Positives = 266/532 (50%), Gaps = 8/532 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+  F  M + +  P   S   LL   A+  + D +   FK +   G  P +F  N++
Sbjct: 80  EEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIM 139

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+C+CK G    A  +   +      P+TVT+N +I+G    GR+ +    F+++   +C
Sbjct: 140 IDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSC 199

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+V+T+NTLIN  C+       L+ F EM     +  KP+VV+Y++++D  CK+  + +
Sbjct: 200 EPDVITYNTLINCFCKFGKLPKGLEFFREMKQ---SGLKPNVVSYSTLVDAFCKEDMMQQ 256

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +  + M+   + PN  TY SL+  +C + +  +A  L  EM   GV+ +VVT+ A+I+
Sbjct: 257 ALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALID 316

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   ++ +   L   M+  GV P+  +Y +L+ GF     + RA EL   M  +G + 
Sbjct: 317 GLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKP 376

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  Y   I + C  +K+E A  +  EM  + I+ +   Y TL+   F+  N  + L L+
Sbjct: 377 DLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLL 436

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN-CKCELRIETYNCLINGLCK 481
           ++M   D+   + TF   IDGLCKN  V +A+  F  I N    +     Y  +I+GLCK
Sbjct: 437 EEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCK 496

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             +++ A  LF ++  KG +PD    +++I    K+G + +A   L D  A+  V S   
Sbjct: 497 EDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQAL-ALRDKMAEIGVESGAR 555

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           F  L +  ++ + +    V +       L  +D  +SS + DL S D   R+
Sbjct: 556 FGDLCQNTIKLSLRMGARVGVQHY---NLGSADSYISSSLNDLNSVDGPPRD 604



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 229/493 (46%), Gaps = 47/493 (9%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P   V + L + L +  +   A     ++ R    P T + N L++     G+     R 
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           FK +      P V T+N +I+ +C+  +   A  LFEEM  +F  +  PD VTYNS+IDG
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEM--KFRGLI-PDTVTYNSMIDG 177

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
             K G +D       +MK  +  P+VITYN+LI  FC      +    F EM  +G++P+
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VV+++ +++  CK+  M +  +    M + G+ P+  TY SL+D +C +G +S A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M   G   +V +Y  LI+  C  +++++A  L+ +M++  + P++ +Y  L+ G  +  
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE--- 470
           N+  AL+L+D+M+   + PD   + T+I  LC     LE ++  + + N   E  I+   
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCG----LEKIEAAKVVMNEMQEKGIKANT 413

Query: 471 ------------------------------------TYNCLINGLCKMGRLKTACKLFHR 494
                                               T+  LI+GLCK   +  A   F R
Sbjct: 414 FIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGR 473

Query: 495 LQHK-GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           + +  G   +    + MI  LCKE Q++ A  L   M  K  VP    + +L+ G ++  
Sbjct: 474 ISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQG 533

Query: 554 KKSKVVVLLHKMA 566
              + + L  KMA
Sbjct: 534 NVVQALALRDKMA 546



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 194/371 (52%), Gaps = 1/371 (0%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           +C P    ++++   L ++   ++A +   +MK   + P   + N L+  F  +      
Sbjct: 58  VCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGM 117

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           K  F +M+  G +P V T+N MI+  CK+G ++  + L E M  RG+ PDTVTYNS++DG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +  VGR+      F  M S  C  DV +YN LIN  CK  K+   +  +REM    ++P+
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           V++Y+TL+    +   +  ALK    M+   +VP+  T+ + +D  CK G + +A ++  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +     E  + TY  LI+GLC + R+K A +LF ++   G IP++ + + +IH   K  
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            MD+A +LL +M+ +   P  + + T +       K     V++++M  EK + ++  + 
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEM-QEKGIKANTFIY 416

Query: 579 SKVVDLLSKDK 589
           + ++D   K +
Sbjct: 417 TTLMDAYFKSE 427



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 222/458 (48%), Gaps = 3/458 (0%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R+   P    F+ L + L  E    EA + F K+      P   + N L++   R   T 
Sbjct: 56  RNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTD 115

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
              + F++M+   GA  KP V TYN +ID +CK+G ++ A  L  +MK R + P+ +TYN
Sbjct: 116 GMKRFFKDMI---GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYN 172

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S+I G+  V    +    F EM     +PDV+T+N +IN  CK GK+ K       M Q 
Sbjct: 173 SMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQS 232

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P+ V+Y++L+D FC    + +A + +V M   G   + ++Y  L++A CK   + DA
Sbjct: 233 GLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDA 292

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EM    +  +V+TY  L+ GL  V  + +A +L  KM    V+P+  ++   I G
Sbjct: 293 FRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHG 352

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             K   +  A+++   ++    +  +  Y   I  LC + +++ A  + + +Q KG   +
Sbjct: 353 FVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKAN 412

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
               +T++    K     +   LL +M   +   + VTFC L+ G  +N   SK +    
Sbjct: 413 TFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFG 472

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +++ +  + ++ ++ + ++D L K+ +       F  +
Sbjct: 473 RISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQM 510


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 155/539 (28%), Positives = 269/539 (49%), Gaps = 7/539 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+  +  +E V   + M+     P   ++  L+   +    +   V +FK ++S+GL P 
Sbjct: 204 KTKEMVKSERV--LEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPC 261

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N  I+ LC+      A  +   ++     PN ++++ L++G  AEG       L  
Sbjct: 262 VVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVN 321

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      PN   FN LIN   R      A+ +FE+M N+ G I  PD VT+ ++I  LC
Sbjct: 322 LMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNK-GMI--PDTVTFATVISSLC 378

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           + G +D A      M D  + P+   Y  LI G C   +  +AK L  EMM+  + P  V
Sbjct: 379 RIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 438

Query: 296 T-FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
             F+++IN   K+G++ +   +++LM+Q G  P+ VT+NSLM+G+CLVG +  A  L  +
Sbjct: 439 KYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 498

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M S G   + Y Y  L++  CK+ +++DA+ ++R+ML + ++P+ + YN +L GLFQ   
Sbjct: 499 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARR 558

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
              A K+  +M  +       T+   + GLC+N    EA  + + +     +  I T+N 
Sbjct: 559 TTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 618

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +I+ + K+GR + A +LF  +   G +P V T + MI  L KE   ++A++L + +E   
Sbjct: 619 VISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSG 678

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
             P       ++R  ++  + +K    L  +    L + + S  S +  L S++ K RE
Sbjct: 679 RAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTL-EASTISLLASLFSREGKCRE 736



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 265/542 (48%), Gaps = 22/542 (4%)

Query: 51  LNDRHKSGNITSNEAVYFFDCMI-----KMKPSPGMTSFTILLTMLAKNKQYDT------ 99
             +R +SG +  ++A + FD ++              + + +L  LA+            
Sbjct: 39  FQERLRSGTLGPDDARHLFDELLLRRDDPAPAPAPARAISDILAALARAPPSAACSDGPA 98

Query: 100 -VVSLFKRLN------SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
             V LFKR++      +    P ++  N+LI+C  +M     A  V GR+LR+   P+  
Sbjct: 99  LAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVC 158

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           ++N LI+G   EG + +A  LF K+   +  P+VVT+N+LI+GLC+T+  + + ++ E+M
Sbjct: 159 SYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQM 218

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           V+   A  +P+  TYNS+I G    G   ++  +  +M    + P V+  NS I   C  
Sbjct: 219 VD---AGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRH 275

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           +  KEAK +F  M+  G +P++++++ +++    +G    +N L+ LM+ +G+ P+   +
Sbjct: 276 NRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFF 335

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N L++ +   G + +A  +F  M +KG   D  ++  +I++ C+  +++DA+  +  M+ 
Sbjct: 336 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVD 395

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT-FATYIDGLCKNGFVL 451
             + PS   Y  L+ G    G L  A +LI +M   D+ P     F++ I+ L K G V 
Sbjct: 396 IGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVA 455

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           E   +   +        + T+N L+ G C +G ++ A  L   +   G  P+     T++
Sbjct: 456 EGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 515

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
              CK G++D A  +  DM  K   P+ V +  +L G  Q  + +    + H+M      
Sbjct: 516 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTT 575

Query: 572 VS 573
           VS
Sbjct: 576 VS 577



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 181/398 (45%), Gaps = 4/398 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F+ M      P   +F  +++ L +  + D  +  F  +   G+ P   V   L
Sbjct: 349 DKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCL 408

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVT-FNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I   C  G    A  ++  ++     P  V  F+ +IN L  EGR+ E   +   +    
Sbjct: 409 IQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTG 468

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PNVVTFN+L+ G C   N   A  L + M +  G   +P+   Y +++DG CK+G +D
Sbjct: 469 QRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS-IG--IEPNCYIYGTLVDGYCKNGRID 525

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  +   M  + + P  + YN ++ G         AK +F EM+++G    + T+  ++
Sbjct: 526 DALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVL 585

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C++   D+ N LLE +    V  D +T+N ++     VGR   A+ELF ++ + G  
Sbjct: 586 GGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLV 645

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             V++YN++I+   K++  E+A  L+  +      P     N ++  L +   +  A   
Sbjct: 646 PTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNY 705

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +  +  N++  ++ T +       + G   E +++  A
Sbjct: 706 LSIIDENNLTLEASTISLLASLFSREGKCREHIKLLPA 743



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 144/276 (52%), Gaps = 1/276 (0%)

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P   TYN L+D +  + R   A  +F  ++  G   DV SYN LI+   K+ +V+ A  L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + +M+ + + P V+TYN+L+ GL +   +  + +++++M    + P++ T+ + I G   
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G   E+V+VF+ + +      +   N  I+ LC+  R+K A  +F  +  KGP P++++
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            ST++H    EG     N L+  M +K  VP+   F  L+  + +     K +++   M 
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            + ++   ++ ++ V+  L +  +  + L++F H++
Sbjct: 360 NKGMIPDTVTFAT-VISSLCRIGRLDDALHKFNHMV 394


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 219/415 (52%), Gaps = 4/415 (0%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF+ +   G+ PD     +++   CK+G    A   L  +L   F  +  TF  +I+   
Sbjct: 192 LFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFS 251

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            +G    A   F++L     +PN++ F  +I GLC+  +   A ++ EEMV   G   KP
Sbjct: 252 GKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMV---GKGWKP 308

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           +V T+ S+IDGLCK G+ +KA  L L++ +  N  PNV+TY ++I G+C  D    A+ L
Sbjct: 309 NVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEML 368

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              M + G+ P+  T+  +I+ +CK G  ++   L+ LM   G +P+  TYN++++G C 
Sbjct: 369 LSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCK 428

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            GR+  A ++       G + D ++YNIL++ +CK + +  A+ L+ +ML   I+P + +
Sbjct: 429 RGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHS 488

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y TL++   +   + ++    ++     ++P + T+ + I G C+ G +  A++ F  + 
Sbjct: 489 YTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLS 548

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           +  C     TY  +I+GLCK  +   A  L+  +  KG +P  VT  T+ +  CK
Sbjct: 549 DHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 227/447 (50%), Gaps = 4/447 (0%)

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
            V +   +++ GL P+   LN +I    +MG+   A ++   +      P+++++  ++ 
Sbjct: 154 AVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVV 213

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
             C  G I+EA +    +       +  TF  +I+       T  AL  F  +V+     
Sbjct: 214 MYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVD---MG 270

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
            +P+++ +  +I+GLCK G + +A E+L +M  +   PNV T+ SLI G C     ++A 
Sbjct: 271 LEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAF 330

Query: 280 CLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
            LF++++     +P+V+T+ AMI+  C++ K+++   LL  M ++G+ P+T TY +L+DG
Sbjct: 331 RLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDG 390

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C  G   RA +L   M S+G   ++ +YN ++N  CK  +V++A  +  +     ++P 
Sbjct: 391 HCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPD 450

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
             TYN L+S   +  N+  AL L +KM    + PD  ++ T I   C+   + E+   F+
Sbjct: 451 KFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFE 510

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
                      +TY  +I G C+ G L  A K FHRL   G  PD +T   +I  LCK+ 
Sbjct: 511 EAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQS 570

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + D+A  L   M  K  VP EVT  TL
Sbjct: 571 KRDEARSLYDSMIEKGLVPCEVTRITL 597



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 217/460 (47%), Gaps = 4/460 (0%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V+  ++    ++G    A  ++  +      PNT T N++I      G +  A  LF+++
Sbjct: 137 VMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEM 196

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
            V    P+ +++  ++   C+  N L A K    M+ E G +   D  T+  II      
Sbjct: 197 CVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVML-ERGFVV--DNATFTLIISRFSGK 253

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G+  +A     ++ D  + PN+I +  +I G C     K+A  +  EM+  G +P+V T 
Sbjct: 254 GYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTH 313

Query: 298 NAMINYNCKDGKMDKVNRL-LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
            ++I+  CK G  +K  RL L+L+      P+ +TY +++ G+C   +++RA  L   M 
Sbjct: 314 TSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMK 373

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +G   +  +Y  LI+ +CK    E A  L   M SE   P++ TYN +++GL + G + 
Sbjct: 374 EQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQ 433

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A K+++    N + PD FT+   +   CK   + +A+ +F  +     +  I +Y  LI
Sbjct: 434 EAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLI 493

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
              C+  R+K +   F      G IP   T ++MI   C+EG +  A      +    C 
Sbjct: 494 AVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCA 553

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           P  +T+  ++ G  + +K+ +   L   M  + LV  +++
Sbjct: 554 PDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVT 593



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 181/350 (51%), Gaps = 4/350 (1%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           SG   +  A+++F  ++ M   P + +FT ++  L K         + + +   G  P++
Sbjct: 251 SGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNV 310

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRS-CFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +    LI+ LCK G T  AF +  +++RS    PN +T+  +I+G C E ++  A  L  
Sbjct: 311 YTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLS 370

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PN  T+ TLI+G C+  N   A  L   M +E  +   P++ TYN+I++GLC
Sbjct: 371 RMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFS---PNLCTYNAIVNGLC 427

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G V +A ++L       + P+  TYN L+   C  ++ ++A  LF +M+  G+QPD+ 
Sbjct: 428 KRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIH 487

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           ++  +I   C++ +M +     E  ++ G+ P   TY S++ G+C  G ++ A + F  +
Sbjct: 488 SYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRL 547

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
              GC  D  +Y  +I+  CK  K ++A  LY  M+ + + P  +T  TL
Sbjct: 548 SDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITL 597



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 205/435 (47%), Gaps = 4/435 (0%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           ++      GR+ EA  +  +++     PN  T N +I           A  LFEEM    
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
               +PD ++Y  ++   CK G + +A + L  M +R    +  T+  +I  F       
Sbjct: 201 ---VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTT 257

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
            A   F  ++D G++P+++ F  MI   CK G + +   +LE M+ +G  P+  T+ SL+
Sbjct: 258 RALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLI 317

Query: 337 DGFCLVGRISRARELFVSMV-SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           DG C  G   +A  LF+ +V S+  + +V +Y  +I+  C++ K+  A  L   M  + +
Sbjct: 318 DGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGL 377

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P+  TY TL+ G  + GN   A  L++ M      P+  T+   ++GLCK G V EA +
Sbjct: 378 VPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYK 437

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           + +       +    TYN L++  CK   ++ A  LF+++   G  PD+ + +T+I   C
Sbjct: 438 MLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFC 497

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           +E +M ++     +      +P+  T+ +++ G+ +    +  +   H+++        +
Sbjct: 498 RENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSI 557

Query: 576 SLSSKVVDLLSKDKK 590
           +  + +  L  + K+
Sbjct: 558 TYGAIISGLCKQSKR 572



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 3/244 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N A      M +    P   ++T L+    K   ++    L   ++S G  P+L   N +
Sbjct: 363 NRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAI 422

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G    A+ +L    ++   P+  T+N L++  C +  I +A  LF K+     
Sbjct: 423 VNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGI 482

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++ ++ TLI   CR      +   FEE V   G I  P   TY S+I G C++G +  
Sbjct: 483 QPDIHSYTTLIAVFCRENRMKESEMFFEEAV-RIGII--PTNKTYTSMICGYCREGNLTL 539

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +   ++ D    P+ ITY ++I G C      EA+ L+  M++ G+ P  VT   +  
Sbjct: 540 AMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAY 599

Query: 303 YNCK 306
             CK
Sbjct: 600 EYCK 603



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 7/163 (4%)

Query: 41  FKDGTSIAKF-----LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           F++G    KF     +++  K  NI   +A+  F+ M+K+   P + S+T L+ +  +  
Sbjct: 443 FQNGLKPDKFTYNILMSEHCKQENI--RQALALFNKMLKIGIQPDIHSYTTLIAVFCREN 500

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           +       F+     G+ P       +I   C+ G  + A     R+      P+++T+ 
Sbjct: 501 RMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYG 560

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            +I+GLC + +  EA  L+  +      P  VT  TL    C+
Sbjct: 561 AIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 153/503 (30%), Positives = 246/503 (48%), Gaps = 44/503 (8%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV---VLGRILRSCFTPNTVTFNFLING 160
            KRL+   L P+L  LN LI  L +       ++   +   +++     NT TFN LI G
Sbjct: 1   MKRLH---LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICG 57

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE----- 215
            C E ++ EA  L  K+  F+C P+ V++NT+++ LC+      A  L  +M N      
Sbjct: 58  CCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPN 117

Query: 216 -------FGAICK--------------------PDVVTYNSIIDGLCKDGFVDKAKELLL 248
                      CK                    PDV TY ++I GLCKDG +D+A  L  
Sbjct: 118 RNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRD 177

Query: 249 QMKDRNINPNVITYNSLICG-FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
           +M++  + P+V+TYN LI G F C    K  + L  EM   GV+P+ VT+N ++ +  K+
Sbjct: 178 EMENLKLLPHVVTYNMLINGCFECSSSLKGFE-LIDEMEGKGVKPNAVTYNVVVKWYVKE 236

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           GKMD     L  M + G +PD VT+N+L +G+C  GR+S A  +   M  KG + +  + 
Sbjct: 237 GKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 296

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N +++  C ++K++DA  L             ++Y TL+ G F+VG         D+M+ 
Sbjct: 297 NTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS----XXWDEMKE 352

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
            +++P   T+ T I GLC++G   +++     +          TYN +I G C+ G++  
Sbjct: 353 KEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDK 412

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A    +++  K   PD+ TC+ ++  LC EG +DKA  L     +K      VTF T++ 
Sbjct: 413 AFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIIS 472

Query: 548 GFVQNNKKSKVVVLLHKMAAEKL 570
           G  +  +  +   LL +M  +KL
Sbjct: 473 GLCEEGRFEEAFDLLAEMEEKKL 495



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 232/465 (49%), Gaps = 7/465 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+     M      P   S+  +L +L K  + +    L   + +NGLFP+    N+L
Sbjct: 65  SEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNIL 124

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK+G    A  V+  + R+   P+  T+  LI GLC +G+I EA RL  ++     
Sbjct: 125 VSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKL 184

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VVT+N LING     ++L   +L +EM    G   KP+ VTYN ++    K+G +D 
Sbjct: 185 LPHVVTYNMLINGCFECSSSLKGFELIDEME---GKGVKPNAVTYNVVVKWYVKEGKMDN 241

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A   L +M++   +P+ +T+N+L  G+C      EA  +  EM   G++ + VT N +++
Sbjct: 242 AGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILH 301

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C + K+D   +LL    +RG   D V+Y +L+ G+  VG+     E    M  K    
Sbjct: 302 TLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDE----MKEKEIIP 357

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            + +Y  +I   C+  K + ++    E+L   + P   TYNT++ G  + G +  A    
Sbjct: 358 SIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFR 417

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           +KM      PD FT    + GLC  G + +A+++F+   +    +   T+N +I+GLC+ 
Sbjct: 418 NKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEE 477

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           GR + A  L   ++ K   PD  T + ++  L   G+M +A + +
Sbjct: 478 GRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFM 522



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 157/293 (53%), Gaps = 3/293 (1%)

Query: 290 VQPDVVTFNAMINYNCKDGKMDKV---NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           ++P+++T N +I    +      V     +   +I+ GV  +T T+N L+ G C+  ++S
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  L   M    C  D  SYN +++  CK  K+ +A  L  +M +  + P+  T+N L+
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           SG  ++G L +A ++ID M  N+V+PD  T+ T I GLCK+G + EA ++   + N K  
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + TYN LING  +        +L   ++ KG  P+ VT + ++ W  KEG+MD A + 
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           L  ME     P  VTF TL  G+ +  + S+   ++ +M+ + L ++ ++L++
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 298


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 233/453 (51%), Gaps = 6/453 (1%)

Query: 51  LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           + DR + G+  + +A+  FD +++      + S    L  +A++      VS F R+   
Sbjct: 23  IQDRARVGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPA-AAVSRFNRMARA 81

Query: 111 G---LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
           G   + P +    +LI C C  G     F  LG +++  F    + FN L+ GLCA+ R 
Sbjct: 82  GASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRT 141

Query: 168 MEAARL-FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
            +A  +  + +    C PNV +   ++ GLC    +  AL+L   M ++ G  C P+VV+
Sbjct: 142 DDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGG-CLPNVVS 200

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+++ DGL K G  DKA     +M DR I PNV+TY+S+I   C      +A  +   M+
Sbjct: 201 YSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMV 260

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            NGV P+  T+ ++++  C  G++ +  + LE M   GV P+ VTY+S MD  C  GR +
Sbjct: 261 KNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCT 320

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            AR++F SMV +G + D+ +Y+ L++    +  + +   L+  M+   ++P    +NTL+
Sbjct: 321 EARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLI 380

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
               + G + +A+ +  KM+   + P+  T+ T I+G CK   +  A+ +FQ + +    
Sbjct: 381 YASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVS 440

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
               TYN ++ GL + GR  TA + + ++   G
Sbjct: 441 PNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSG 473



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 189/408 (46%), Gaps = 4/408 (0%)

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G   +A  +F +L        + + N  +  + R  N   A+  F  M     ++  P
Sbjct: 30  GSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARD-NPAAAVSRFNRMARAGASMVTP 88

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            V TY  +I   C  G +D     L  +  +      I +N L+ G C      +A  + 
Sbjct: 89  TVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIV 148

Query: 283 IE-MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN--PDTVTYNSLMDGF 339
           +  M + G  P+V +   ++   C + +  +   LL +M   G    P+ V+Y+++ DG 
Sbjct: 149 LRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGL 208

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
              G   +A   +  M+ +    +V +Y+ +I A CK Q ++ A+ ++  M+   + P+ 
Sbjct: 209 LKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNC 268

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            TY +L+ G    G L +A+K ++KM  N V P+  T+++++D LCKNG   EA ++F +
Sbjct: 269 FTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYS 328

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +  I TY+ L++G    G L     LF  +      PD    +T+I+   K+G+
Sbjct: 329 MVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGK 388

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +D+A  +   M  +   P+ VT+ TL+ G+ +  +    + L  +M +
Sbjct: 389 VDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVS 436



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 183/374 (48%), Gaps = 6/374 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P V T+  LI   C      +       +V + G   +P  + +N ++ GLC D   D A
Sbjct: 88  PTVHTYGILIGCCCSAGRLDLGFAALGHVVKK-GFRVEP--IIFNPLLKGLCADKRTDDA 144

Query: 244 KELLLQ-MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ--PDVVTFNAM 300
            +++L+ M +    PNV ++  ++ G C  +  +EA  L   M D+G    P+VV+++ +
Sbjct: 145 MDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTV 204

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
            +   K G  DK       M+ R + P+ VTY+S++   C    + +A E+   MV  G 
Sbjct: 205 TDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGV 264

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             + ++Y  L++  C   ++ +A+    +M S  + P+V+TY++ +  L + G   +A K
Sbjct: 265 TPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARK 324

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           +   M    + PD  T+++ + G    G ++E   +F  +     +     +N LI    
Sbjct: 325 IFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASA 384

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G++  A  +F +++H+G  P+ VT +T+I+  CK  +M+ A  L  +M +    P+ +
Sbjct: 385 KQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFI 444

Query: 541 TFCTLLRGFVQNNK 554
           T+  +L+G  +  +
Sbjct: 445 TYNIMLQGLFRTGR 458



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 155/319 (48%), Gaps = 3/319 (0%)

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD-KV 313
           + P V TY  LI   C              ++  G + + + FN ++   C D + D  +
Sbjct: 86  VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV--SKGCRHDVYSYNILI 371
           + +L  M + G  P+  ++  ++ G C   R   A EL   M     GC  +V SY+ + 
Sbjct: 146 DIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVT 205

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +   K    + A   YREML  RI P+V+TY+++++ L +   +  A+++ D+M  N V 
Sbjct: 206 DGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVT 265

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+ FT+ + + G C +G + EA++  + + +   E  + TY+  ++ LCK GR   A K+
Sbjct: 266 PNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F+ +  +G  PD+ T S+++H    EG + + + L   M   +  P    F TL+    +
Sbjct: 326 FYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAK 385

Query: 552 NNKKSKVVVLLHKMAAEKL 570
             K  + +++  KM  + L
Sbjct: 386 QGKVDEAMLVFSKMRHQGL 404



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 143/332 (43%), Gaps = 41/332 (12%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG---VNPDTVTY 332
           ++A  +F E++  G+   + + N  +    +D     V+R    M + G   V P   TY
Sbjct: 35  EDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRF-NRMARAGASMVTPTVHTY 93

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
             L+   C  GR+         +V KG R +   +N L+   C D++ +DA+        
Sbjct: 94  GILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM-------- 145

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
                     + +L G+ ++G                 VP+ F+    + GLC      E
Sbjct: 146 ----------DIVLRGMTELG----------------CVPNVFSHTIILKGLCHENRSQE 179

Query: 453 AVQVFQAIRN--CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
           A+++   + +    C   + +Y+ + +GL K G    A   +  +  +  +P+VVT S++
Sbjct: 180 ALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSI 239

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           I  LCK   MDKA ++   M      P+  T+ +L+ GF  + + ++ +  L KM +  +
Sbjct: 240 IAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGV 299

Query: 571 VVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             + ++ SS  +D L K+ +  E    F  ++
Sbjct: 300 EPNVVTYSS-FMDYLCKNGRCTEARKIFYSMV 330


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 260/505 (51%), Gaps = 4/505 (0%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           +  +  L+    +  Q D    +   +   G+ P++      I   C+      AF +  
Sbjct: 204 VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYE 263

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            ++R+    + VT + L+ GLC +GR  EA  LF++++     PN VT+ TLI+ L +  
Sbjct: 264 GMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAG 323

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
                L L  EMV+  G +   D+VTY +++D L K G  D+ K+ L      N++PN +
Sbjct: 324 RGKELLSLLGEMVSR-GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV 380

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY  LI   C   +  EA+ + +EM +  + P+VVTF+++IN   K G +DK      +M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            +RG+NP+ VTY +L+DGF        A E++  M+ +G + + +  + L+N   ++ K+
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           E+A+ L+++     +    + Y TL+ GLF+ G++  A K   ++   +++PD+  +  +
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+ LC  G   EA      +RN   +    TYN +I   C+ G    A KL H ++    
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P+++T +T++  L   G ++KA  LL +M +    PS +T   +L+   Q +++  V++
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ-SRRLDVIL 679

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLL 585
            +H+      + +D+++ + ++ +L
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 237/491 (48%), Gaps = 9/491 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP-DLFVLNLLINCLCKMGITSGA 135
           P  G+T  T LL  L +N Q D   +L  R    G+   D+   N LI   C++G T  A
Sbjct: 132 PFDGVTVNT-LLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRVGDTPAA 188

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             V  R+       + V +N L+ G C  G++  A  +   +     DPNV T+   I  
Sbjct: 189 LSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVY 248

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            CRT+    A  L+E MV   G +   DVVT ++++ GLC+DG   +A  L  +M     
Sbjct: 249 YCRTKGVEEAFDLYEGMVRN-GVLL--DVVTLSALVAGLCRDGRFSEAYALFREMDKVGA 305

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PN +TY +LI         KE   L  EM+  GV  D+VT+ A++++  K GK D+V  
Sbjct: 306 APNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKD 365

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
            L   +   ++P+ VTY  L+D  C    +  A ++ + M  K    +V +++ +IN   
Sbjct: 366 TLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV 425

Query: 376 KDQKVEDAVCLYREMLSER-IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           K + + D    Y+ M+ ER I P+V+TY TL+ G F+      AL++   M    V  + 
Sbjct: 426 K-RGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNK 484

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           F   + ++GL +NG + EA+ +F+        L    Y  LI+GL K G + TA K    
Sbjct: 485 FIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQE 544

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           L  +  +PD V  +  I+ LC  G+  +A   L +M      P + T+ T++    +  +
Sbjct: 545 LMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGE 604

Query: 555 KSKVVVLLHKM 565
            +K + LLH+M
Sbjct: 605 TAKALKLLHEM 615



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 241/514 (46%), Gaps = 3/514 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M K+  +P   ++  L+  LAK  +   ++SL   + S G+  DL     L
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ L K G T      L   L    +PN VT+  LI+ LC    + EA ++  ++   + 
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVVTF+++ING  + R  L     ++ M+ E G    P+VVTY ++IDG  K    D 
Sbjct: 411 SPNVVTFSSVINGFVK-RGLLDKATEYKRMMKERG--INPNVVTYGTLIDGFFKFQGQDA 467

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+   M    +  N    +SL+ G       +EA  LF +   +G+  D V +  +I+
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G M    +  + ++ R + PD V YN  ++  C++G+   A+     M + G + 
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +YN +I ++C+  +   A+ L  EM    I+P++ITYNTL++GLF  G +  A  L+
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M      P S T    +    ++  +   + + + + N      I  YN L+  LC  
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G  + A  +   +   G  PD +T + +I   CK   +D A      M  +N  P+  TF
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            TLL G     +  +   +L +M    L  ++L+
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLT 801



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 159/600 (26%), Positives = 257/600 (42%), Gaps = 77/600 (12%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++T L+  L K  + D V    +   S+ L P+     +LI+ LCK      A  VL 
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            +     +PN VTF+ +ING    G + +A    + +     +PNVVT+ TLI+G  + +
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463

Query: 201 NTLVALKLFEEM------VNEF--------------------------GAICKPDVVTYN 228
               AL+++ +M      VN+F                          G+    D V Y 
Sbjct: 464 GQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++IDGL K G +  A +   ++ DRN+ P+ + YN  I   C +  +KEAK    EM + 
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNM 583

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G++PD  T+N MI  +C+ G+  K  +LL  M    + P+ +TYN+L+ G    G + +A
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643

Query: 349 RELFVSMVS-----------------------------------KGCRHDVYSYNILINA 373
           + L   MVS                                    G   D+  YN L+  
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C       A  +  EML   I P  IT+N L+ G  +  +L +A     +M   ++ P+
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             TF T + GL   G + EA  V   +     E    TY+ L  G  K      A +L+ 
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYC 823

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV--- 550
            +  KG +P V T + +I    K G M +A +L  DM+ +   P+  T+  L+ G+    
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLA 883

Query: 551 -----QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK--YRECLNQFRHLLF 603
                QN   +++          K+ +S ++L+ + + L     K  +   L QF  LL+
Sbjct: 884 REQKSQNTYFTEIYCFSASRHQSKIAISRVNLALQFMSLYLNGPKMNWLNGLQQFYSLLY 943



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 141/561 (25%), Positives = 249/561 (44%), Gaps = 57/561 (10%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           LS +   +G +    ++   K+ N+   E V     M +   SP + +F+ ++    K  
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE--MEEKSISPNVVTFSSVINGFVKRG 428

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
             D      + +   G+ P++     LI+   K      A  V   +L      N    +
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            L+NGL   G+I EA  LFK  +      + V + TLI+GL +  +   A K  +E+++ 
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 216 FGAICKPDVVTYNSIID---------------------GL--------------CKDGFV 240
                 PD V YN  I+                     GL              C+ G  
Sbjct: 549 N---MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGET 605

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            KA +LL +MK  +I PN+ITYN+L+ G       ++AK L  EM+  G  P  +T   +
Sbjct: 606 AKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +    +  ++D +  + E M+  G++ D   YN+L+   C  G   +A  +   M+  G 
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D  ++N LI  +CK   +++A   Y +ML + I P++ T+NTLL GL  VG +G+A  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           ++ +M+ + + P++ T+     G  K    +EA++++  +       ++ TYN LI+   
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH-WLCKEGQMDKANDLLLDMEAKNCVPSE 539
           K G +  A +LF  +Q +G  P   T   ++  W           DL  + +++N   +E
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWY----------DLAREQKSQNTYFTE 895

Query: 540 VTFCTLLRGFVQNNKKSKVVV 560
           + +C     F  +  +SK+ +
Sbjct: 896 I-YC-----FSASRHQSKIAI 910



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 216/466 (46%), Gaps = 14/466 (3%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D   LN L+   C++ +   A      +LRS   P TV +N L+  L        A  + 
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIA----LLRSS-RPTTVAYNILLAALSDHA---HAPAVL 123

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            ++       + VT NTL+ GLCR      A  L     +  G I   DV+ +N++I G 
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL----ADRGGGIHALDVIGWNTLIAGY 179

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           C+ G    A  +  +M  + +  +V+ YN+L+ GFC       A+ +   M + GV P+V
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            T+   I Y C+   +++   L E M++ GV  D VT ++L+ G C  GR S A  LF  
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M   G   +  +Y  LI++  K  + ++ + L  EM+S  +   ++TY  L+  L + G 
Sbjct: 300 MDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359

Query: 415 LGDALKLIDKMQLND-VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
             D +K   +  L+D + P+  T+   ID LCK   V EA QV   +        + T++
Sbjct: 360 T-DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFS 418

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +ING  K G L  A +    ++ +G  P+VVT  T+I    K    D A ++  DM  +
Sbjct: 419 SVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
               ++    +L+ G  QN K  + + L    +   L +  ++ ++
Sbjct: 479 GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 236/473 (49%), Gaps = 6/473 (1%)

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           +S F+ + S+G+ PD+   N ++  L           V   +L+    P+ VT+N L++ 
Sbjct: 181 LSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDS 240

Query: 161 LCAEGRIMEAARLFKKLNV--FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
              EGR  +   L K++     +C PN VT+N +I GL R      A +L EEM      
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK-- 298

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
             K    TYN +I GL   GFV K  +L L+M++  I P V+TYN++I G       + A
Sbjct: 299 --KASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAA 356

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           +  F+EM   G+ PDV+T+N+++N  CK G   +   L   + + G+ P  +TYN L+DG
Sbjct: 357 QAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDG 416

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C +G +  AR L   MV +GC  DVY+Y IL+  +     +      + EMLS+ +RP 
Sbjct: 417 YCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPD 476

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              YNT +     +G++  + +L + + L  +  D+ T+   IDGLCK G + +A ++  
Sbjct: 477 CFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMM 536

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            + +   +    TY CLI+  C+ G L+ A K F+ +   G  P  VT + +IH  C+ G
Sbjct: 537 QMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRG 596

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +  A      M  +   P+E+T+  L+    +  +        ++M    LV
Sbjct: 597 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLV 649



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 241/483 (49%), Gaps = 15/483 (3%)

Query: 35  DLSSH----HFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTM 90
           +++SH      KD   + + L D  +  ++++  A      M+++   P + ++  LL  
Sbjct: 186 EMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAE-----MLQLGIEPSIVTYNTLLDS 240

Query: 91  LAKNKQYDTVVSLFKRLNSNGL--FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT 148
            +K  + D +  L K + + G    P+    N++I  L + G    A  ++   +R    
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELV-EEMRLSKK 299

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
            ++ T+N LI GL A G + +   L  ++      P VVT+N +I+GL ++     A   
Sbjct: 300 ASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAK 359

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F EM    G +  PDV+TYNS+++G CK G   +A  L   ++   + P V+TYN LI G
Sbjct: 360 FVEM-RAMGLL--PDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDG 416

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           +C + D +EA+ L  EM++ G  PDV T+  ++  +     +       + M+ +G+ PD
Sbjct: 417 YCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPD 476

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
              YN+ +     +G IS++ +L   ++ +G   D  +YNILI+  CK   ++DA  L  
Sbjct: 477 CFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMM 536

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           +M+S  ++P  ITY  L+    + G L +A K  + M  + + P + T+   I   C+ G
Sbjct: 537 QMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRG 596

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            +  A   F+ +     E    TYN LI+ LC+MGR + A + F+ +  +G +P+  T +
Sbjct: 597 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYT 656

Query: 509 TMI 511
            +I
Sbjct: 657 LLI 659



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 198/394 (50%), Gaps = 2/394 (0%)

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P++VT+NTL++   +         L +EM    G+ C P+ VTYN +I GL + G++++
Sbjct: 228 EPSIVTYNTLLDSFSKEGRKDKIDMLLKEM-EARGSSCLPNDVTYNVVIAGLARKGYLEE 286

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL+ +M+  +   +  TYN LI G       K+   L +EM + G+ P VVT+NAMI+
Sbjct: 287 AAELVEEMR-LSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIH 345

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              + G+++        M   G+ PD +TYNSL++G+C  G    A  LF  +   G   
Sbjct: 346 GLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAP 405

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V +YNILI+  C+   +E+A  L  EM+ +   P V TY  L+ G   V +L    +  
Sbjct: 406 TVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFF 465

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M    + PD F + T I      G + ++ Q+ + I          TYN LI+GLCK 
Sbjct: 466 DEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKT 525

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G LK A +L  ++   G  PD +T + +IH  C+ G + +A     DM +    PS VT+
Sbjct: 526 GNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTY 585

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
             ++  + +            KM  E +  ++++
Sbjct: 586 TVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 619



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 178/371 (47%), Gaps = 5/371 (1%)

Query: 75  MKPSPGMTSFTI--LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
           M+ S   +SFT   L+T L        V  L   + + G+ P +   N +I+ L + G  
Sbjct: 294 MRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQI 353

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
             A      +      P+ +T+N L+NG C  G   EA  LF  L      P V+T+N L
Sbjct: 354 EAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNIL 413

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           I+G CR  +   A +L EEMV +    C PDV TY  ++ G      +   +E   +M  
Sbjct: 414 IDGYCRLGDLEEARRLKEEMVEQG---CLPDVYTYTILMKGSHNVCSLAMTREFFDEMLS 470

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           + + P+   YN+ IC    + D  ++  L   +M  G+  D VT+N +I+  CK G +  
Sbjct: 471 KGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKD 530

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              L+  MI  G+ PD +TY  L+   C  G +  AR+ F  M+S G      +Y ++I+
Sbjct: 531 AEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIH 590

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
           A C+   +  A   +R+ML E + P+ ITYN L+  L ++G    A +   +M    +VP
Sbjct: 591 AYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVP 650

Query: 433 DSFTFATYIDG 443
           + +T+   IDG
Sbjct: 651 NKYTYTLLIDG 661



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 38/230 (16%)

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M S G   DV   N ++       + +D   ++ EML   I PS++TYNTLL    +
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 412 VGNLGDALKLIDKMQL--NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            G       L+ +M+   +  +P+  T+   I GL + G++ EA ++ + +R  K     
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSF 303

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TYN LI GL   G +K                                   K +DL L+
Sbjct: 304 -TYNPLITGLLARGFVK-----------------------------------KVDDLQLE 327

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           ME +  +P+ VT+  ++ G +Q+ +         +M A  L+   ++ +S
Sbjct: 328 MENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNS 377



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 47/97 (48%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA  FF+ MI     P   ++T+++    +     +    F+++   G+ P+    N+LI
Sbjct: 565 EARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLI 624

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           + LC+MG T  A+     +L     PN  T+  LI+G
Sbjct: 625 HALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 260/505 (51%), Gaps = 4/505 (0%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           +  +  L+    +  Q D    +   +   G+ P++      I   C+      AF +  
Sbjct: 204 VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYE 263

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            ++R+    + VT + L+ GLC +GR  EA  LF++++     PN VT+ TLI+ L +  
Sbjct: 264 GMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAG 323

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
                L L  EMV+  G +   D+VTY +++D L K G  D+ K+ L      N++PN +
Sbjct: 324 RGKELLSLLGEMVSR-GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV 380

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY  LI   C   +  EA+ + +EM +  + P+VVTF+++IN   K G +DK      +M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            +RG+NP+ VTY +L+DGF        A E++  M+ +G + + +  + L+N   ++ K+
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           E+A+ L+++     +    + Y TL+ GLF+ G++  A K   ++   +++PD+  +  +
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+ LC  G   EA      +RN   +    TYN +I   C+ G    A KL H ++    
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P+++T +T++  L   G ++KA  LL +M +    PS +T   +L+   Q +++  V++
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ-SRRLDVIL 679

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLL 585
            +H+      + +D+++ + ++ +L
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 241/514 (46%), Gaps = 3/514 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M K+  +P   ++  L+  LAK  +   ++SL   + S G+  DL     L
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ L K G T      L   L    +PN VT+  LI+ LC    + EA ++  ++   + 
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVVTF+++ING  + R  L     ++ M+ E G    P+VVTY ++IDG  K    D 
Sbjct: 411 SPNVVTFSSVINGFVK-RGLLDKATEYKRMMKERG--INPNVVTYGTLIDGFFKFQGQDA 467

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+   M    +  N    +SL+ G       +EA  LF +   +G+  D V +  +I+
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G M    +  + ++ R + PD V YN  ++  C++G+   A+     M + G + 
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +YN +I ++C+  +   A+ L  EM    I+P++ITYNTL++GLF  G +  A  L+
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M      P S T    +    ++  +   + + + + N      I  YN L+  LC  
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G  + A  +   +   G  PD +T + +I   CK   +D A      M  +N  P+  TF
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            TLL G     +  +   +L +M    L  ++L+
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLT 801



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 244/565 (43%), Gaps = 67/565 (11%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++T L+  L K  + D V    +   S+ L P+     +LI+ LCK      A  VL 
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            +     +PN VTF+ +ING    G + +A    + +     +PNVVT+ TLI+G  + +
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463

Query: 201 NTLVALKLFEEM------VNEF--------------------------GAICKPDVVTYN 228
               AL+++ +M      VN+F                          G+    D V Y 
Sbjct: 464 GQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++IDGL K G +  A +   ++ DRN+ P+ + YN  I   C +  +KEAK    EM + 
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNM 583

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G++PD  T+N MI  +C+ G+  K  +LL  M    + P+ +TYN+L+ G    G + +A
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643

Query: 349 RELFVSMVS-----------------------------------KGCRHDVYSYNILINA 373
           + L   MVS                                    G   D+  YN L+  
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C       A  +  EML   I P  IT+N L+ G  +  +L +A     +M   ++ P+
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             TF T + GL   G + EA  V   +     E    TY+ L  G  K      A +L+ 
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYC 823

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +  KG +P V T + +I    K G M +A +L  DM+ +   P+  T+  L+ G+ +  
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIR 883

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLS 578
             ++V   L  M  +    S  +LS
Sbjct: 884 NGTEVKKCLKDMKEKGFSPSKGTLS 908



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/546 (25%), Positives = 245/546 (44%), Gaps = 34/546 (6%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           LS +   +G +    ++   K+ N+   E V     M +   SP + +F+ ++    K  
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE--MEEKSISPNVVTFSSVINGFVKRG 428

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
             D      + +   G+ P++     LI+   K      A  V   +L      N    +
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            L+NGL   G+I EA  LFK  +      + V + TLI+GL +  +   A K  +E+++ 
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 216 ------------FGAIC--------------------KPDVVTYNSIIDGLCKDGFVDKA 243
                          +C                    KPD  TYN++I   C+ G   KA
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +LL +MK  +I PN+ITYN+L+ G       ++AK L  EM+  G  P  +T   ++  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             +  ++D +  + E M+  G++ D   YN+L+   C  G   +A  +   M+  G   D
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             ++N LI  +CK   +++A   Y +ML + I P++ T+NTLL GL  VG +G+A  ++ 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+ + + P++ T+     G  K    +EA++++  +       ++ TYN LI+   K G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A +LF  +Q +G  P   T   ++    +     +    L DM+ K   PS+ T  
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 544 TLLRGF 549
            + R F
Sbjct: 909 FICRAF 914



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 228/523 (43%), Gaps = 79/523 (15%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P     N+L+  L      + A  VL  + +     + VT N L+ GLC  G++  AA L
Sbjct: 101 PTTVAYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 174 FKKLNVFACDPNVVTFNTL-INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
             +       P + +  TL +  +    +T  AL + + M  +   +   DVV YN+++ 
Sbjct: 158 ADRAG--GITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPM---DVVGYNTLVA 212

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G C+ G VD A+ +L  MK+  ++PNV TY   I  +C     +EA  L+  M+ NGV  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           DVVT +A++   C+DG+  +   L   M + G  P+ VTY +L+D     GR      L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 353 VSMVSKGCRHDV-----------------------------------YSYNILINANCKD 377
             MVS+G   D+                                    +Y +LI+A CK 
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             V++A  +  EM  + I P+V+T++++++G  + G L  A +    M+   + P+  T+
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 438 ATYIDG-----------------LC------------------KNGFVLEAVQVFQAIRN 462
            T IDG                 LC                  +NG + EA+ +F+    
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
               L    Y  LI+GL K G + TA K    L  +  +PD V  +  I+ LC  G+  +
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           A   L +M      P + T+ T++    +  + +K + LLH+M
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 189/451 (41%), Gaps = 35/451 (7%)

Query: 43  DGTSIAKFLNDRHKSG---NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT 99
           +G  + KF+ D   +G   N    EA+  F        S    ++T L+  L K     T
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
                + L    + PD  V N+ INCLC +G    A   L  +      P+  T+N +I 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---- 215
             C +G   +A +L  ++ + +  PN++T+NTL+ GL  T     A  L  EMV+     
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657

Query: 216 ----------------------------FGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
                                         A    D+  YN+++  LC  G   KA  +L
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M    I P+ IT+N+LI G C       A   + +M+   + P++ TFN ++      
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G++ +   +L  M + G+ P+ +TY+ L  G         A  L+  MV KG    V +Y
Sbjct: 778 GRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTY 837

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N LI+   K   +  A  L+++M    + P+  TY+ L+SG  ++ N  +  K +  M+ 
Sbjct: 838 NALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
               P   T +       K G   +A ++ +
Sbjct: 898 KGFSPSKGTLSFICRAFSKPGMTWQAQRLLK 928



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 199/424 (46%), Gaps = 24/424 (5%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP----DVVTYNSIIDGLCKDGF 239
           P  V +N L+  L    +   A  +  EM       CK     D VT N+++ GLC++G 
Sbjct: 101 PTTVAYNILLAALSDHAH---APAVLAEM-------CKRGVPFDGVTVNTLLAGLCRNGQ 150

Query: 240 VDKAKELLLQMKDRNINPNVITYNSL----ICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           VD A  L  +     I P + +  +L    I GF    D   A  +   M   G+  DVV
Sbjct: 151 VDAAAALADRAG--GITPWMSSAGTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVV 205

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            +N ++   C+ G++D    +L++M + GV+P+  TY   +  +C    +  A +L+  M
Sbjct: 206 GYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGM 265

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V  G   DV + + L+   C+D +  +A  L+REM      P+ +TY TL+  L + G  
Sbjct: 266 VRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRG 325

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            + L L+ +M    VV D  T+   +D L K G   E     +   +        TY  L
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVL 385

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+ LCK   +  A ++   ++ K   P+VVT S++I+   K G +DKA +    M+ +  
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            P+ VT+ TL+ GF +   +   + + H M  E + V+   + S +V+ L ++ K  E +
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS-LVNGLRQNGKIEEAM 504

Query: 596 NQFR 599
             F+
Sbjct: 505 ALFK 508



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 206/459 (44%), Gaps = 18/459 (3%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D   LN L+   C++ +   A      +LRS   P TV +N L+  L        A  + 
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIA----LLRSS-RPTTVAYNILLAALSDHA---HAPAVL 123

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            ++       + VT NTL+ GLCR       +     + +  G I     ++    +  L
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQ----VDAAAALADRAGGITP--WMSSAGTLSLL 177

Query: 235 CKDGFVDKAKELLL--QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
              GF D    L +  +M  + +  +V+ YN+L+ GFC       A+ +   M + GV P
Sbjct: 178 DIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           +V T+   I Y C+   +++   L E M++ GV  D VT ++L+ G C  GR S A  LF
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M   G   +  +Y  LI++  K  + ++ + L  EM+S  +   ++TY  L+  L + 
Sbjct: 298 REMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQ 357

Query: 413 GNLGDALKLIDKMQLND-VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
           G   D +K   +  L+D + P+  T+   ID LCK   V EA QV   +        + T
Sbjct: 358 GKT-DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           ++ +ING  K G L  A +    ++ +G  P+VVT  T+I    K    D A ++  DM 
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            +    ++    +L+ G  QN K  + + L    +   L
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGL 515


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 247/494 (50%), Gaps = 8/494 (1%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L+ +L   GL PD    N +I   CK G  + A      +  S    +T T N L+ G C
Sbjct: 170 LYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYC 229

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G + +A  L   + +  C  N  ++  LI GLC TR    AL L   M+ +    C P
Sbjct: 230 RTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDG---CSP 286

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           ++ TY  +I GLCK+G +  A+ LL +M  R + P+V TYN++I G+C     K+A  + 
Sbjct: 287 NLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIK 346

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M  NG  PD  T+N++I+  C  GK D+   LL   I RG +P  +T+ ++++G+C  
Sbjct: 347 TLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKA 405

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            +I  A  +   M+S  C+ D+ +Y +LI+   K  ++++A     E+ +  + P+V+ Y
Sbjct: 406 EKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIY 465

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            +++    +VG +G AL++    +     P+++T+++ I GL ++  + +A+ +   ++ 
Sbjct: 466 TSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 525

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 + TY  LI G CK      A +LF  ++  G  PD    + +   LCK G+ ++
Sbjct: 526 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEE 585

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A   L+    K  V ++VT+ +L+ GF +         L+ KM  E    +D    S ++
Sbjct: 586 AYSFLVK---KGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEG-CKADSHTYSVLL 641

Query: 583 DLLSKDKKYRECLN 596
             L K KK  E L+
Sbjct: 642 QALCKQKKLNEALS 655



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 159/578 (27%), Positives = 261/578 (45%), Gaps = 95/578 (16%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  ++A    D M +    P + ++  ++    K+ +    + +   +  NG  PD
Sbjct: 300 KEGRI--HDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPD 357

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR--- 172
            +  N LI+ LC         ++ G I R  F+P  +TF  +ING C   +I +A R   
Sbjct: 358 DWTYNSLIHGLCGGKPDEAEELLNGAIARG-FSPTVITFTNIINGYCKAEKIDDALRVKS 416

Query: 173 --------------------LFKK---------LN-VFA--CDPNVVTFNTLINGLCRTR 200
                               L KK         LN +FA    PNVV + ++I+  C+  
Sbjct: 417 IMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVG 476

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               AL++F+   +E    C+P+  TY+S+I GL +D  + KA  L+ +M++  I P VI
Sbjct: 477 KVGAALEVFKLTEHEG---CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVI 533

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY +LI G C   ++  A  LF  M  NG+ PD   +N + +  CK G+ ++    L   
Sbjct: 534 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--- 590

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           +++GV    VTY SL+DGF   G    A  L   MV++GC+ D ++Y++L+ A CK +K+
Sbjct: 591 VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKL 650

Query: 381 EDAV-----------------------------------CLYREMLSERIRPSVITYNTL 405
            +A+                                    ++ EM+S   +PS ITY   
Sbjct: 651 NEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVF 710

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           +S   ++G + +A  LI +M+ N V PD  T+  +I+G    G++  A    + + +  C
Sbjct: 711 ISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASC 770

Query: 466 ELRIETYNCLINGLCKMG----------------RLKTACKLFHRLQHKGPIPDVVTCST 509
           E    TY  L+    KM                 +L T  +L  R+   G  P  VT S+
Sbjct: 771 EPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSS 830

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           +I   CK  ++++A  LL  M  K+  P+E  +  L++
Sbjct: 831 IIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIK 868



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 227/449 (50%), Gaps = 7/449 (1%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           +   +LI  LC+      A V+L  +L+   +PN  T+  LI GLC EGRI +A  L  +
Sbjct: 254 YSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDE 313

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P+V T+N +I+G C++     AL +   M    G  C PD  TYNS+I GLC 
Sbjct: 314 MPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLME---GNGCNPDDWTYNSLIHGLC- 369

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G  D+A+ELL     R  +P VIT+ ++I G+C  +   +A  +   M+ +  + D+  
Sbjct: 370 GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQA 429

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +I+   K  ++ +    L  +   G++P+ V Y S++D +C VG++  A E+F    
Sbjct: 430 YGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTE 489

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +GCR + ++Y+ LI    +DQK+  A+ L  +M  + I P VITY TL+ G  +     
Sbjct: 490 HEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 549

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +L + M+ N + PD   +    D LCK+G   EA   +  +      L   TY  L+
Sbjct: 550 NAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVKKGVVLTKVTYTSLV 606

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G  K G  + A  L  ++ ++G   D  T S ++  LCK+ ++++A  +L  M  +   
Sbjct: 607 DGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVK 666

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            + V +  ++   ++  K      + ++M
Sbjct: 667 GNIVAYTIIISEMIKEGKHDHAKSMFNEM 695



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 232/468 (49%), Gaps = 8/468 (1%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           NL +  L +  +T     +  ++++    P+TVT+N +I   C EG +  A R F+ L  
Sbjct: 152 NLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRE 211

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
              + +  T N L+ G CRT +   A  L   M+   G  C+ +  +Y  +I GLC+   
Sbjct: 212 SGMEMDTYTCNALLLGYCRTGDLRKACWLLM-MMPLMG--CRRNEYSYTILIQGLCETRC 268

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           V +A  LLL M     +PN+ TY  LI G C      +A+ L  EM   GV P V T+NA
Sbjct: 269 VREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNA 328

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           MI+  CK G++     +  LM   G NPD  TYNSL+ G C  G+   A EL    +++G
Sbjct: 329 MIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARG 387

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
               V ++  +IN  CK +K++DA+ +   M+S + +  +  Y  L+S L +   L +A 
Sbjct: 388 FSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAK 447

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
             ++++  N + P+   + + ID  CK G V  A++VF+   +  C     TY+ LI GL
Sbjct: 448 DTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGL 507

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
            +  +L  A  L  ++Q  G  P V+T +T+I   CK+ + D A  L   ME     P E
Sbjct: 508 IQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 567

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
             +  L     ++ +  +    L K   + +V++ ++ +S +VD  SK
Sbjct: 568 QAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYTS-LVDGFSK 611



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 230/485 (47%), Gaps = 7/485 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+     M++   SP + ++T+L+  L K  +      L   +   G+ P ++  N +I
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G    A  +   +  +   P+  T+N LI+GLC  G+  EA  L          
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFS 389

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P V+TF  +ING C+      AL++   M++   + CK D+  Y  +I  L K   + +A
Sbjct: 390 PTVITFTNIINGYCKAEKIDDALRVKSIMIS---SKCKLDLQAYGVLISVLIKKHRLKEA 446

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K+ L ++    ++PNV+ Y S+I  +C V     A  +F      G +P+  T++++I  
Sbjct: 447 KDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYG 506

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             +D K+ K   L+  M + G+ P  +TY +L+ G C       A  LF  M   G   D
Sbjct: 507 LIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPD 566

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +YN+L +A CK  + E+A   Y  ++ + +  + +TY +L+ G  + GN   A  LI+
Sbjct: 567 EQAYNVLTDALCKSGRAEEA---YSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIE 623

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           KM       DS T++  +  LCK   + EA+ +   +     +  I  Y  +I+ + K G
Sbjct: 624 KMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEG 683

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +   A  +F+ +   G  P  +T +  I   CK G++++A  L+ +ME     P  VT+ 
Sbjct: 684 KHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYN 743

Query: 544 TLLRG 548
             + G
Sbjct: 744 VFING 748



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 196/453 (43%), Gaps = 57/453 (12%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +PG+ ++T L+    K  ++D    LF+ +  NGL PD    N+L + LCK G    A+ 
Sbjct: 529 TPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYS 588

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            L   ++       VT+  L++G    G    AA L +K+    C  +  T++ L+  LC
Sbjct: 589 FL---VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALC 645

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + +    AL + ++M        K ++V Y  II  + K+G  D AK +  +M      P
Sbjct: 646 KQKKLNEALSILDQMTLRG---VKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKP 702

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA------------------ 299
           + ITY   I  +C +   +EA  L  EM  NGV PDVVT+N                   
Sbjct: 703 SAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTL 762

Query: 300 --MINYNCKDG-------------------------------KMDKVNRLLELMIQRGVN 326
             MI+ +C+                                 K+D V +LLE M++ G+N
Sbjct: 763 KRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLN 822

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P  VTY+S++ GFC   R+  A  L   M+ K    +   Y +LI   C  +  E A   
Sbjct: 823 PTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASF 882

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
              M+    +P + +Y+ L++GL   G+   A  L   +   D   +   +    DGL K
Sbjct: 883 VTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLK 942

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            G V    Q+  A+ N  C +  ETY+ + N +
Sbjct: 943 AGHVDICSQLLSAMENRHCRIDSETYSMVTNNI 975



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 205/411 (49%), Gaps = 8/411 (1%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N  +  L R   T    KL+ ++V E G +  PD VTYN++I   CK+G +  A     
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQE-GLL--PDTVTYNTMIMAYCKEGSLAIAHRYFR 207

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            +++  +  +  T N+L+ G+C   D ++A  L + M   G + +  ++  +I   C+  
Sbjct: 208 LLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETR 267

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            + +   LL +M+Q G +P+  TY  L+ G C  GRI  AR L   M  +G    V++YN
Sbjct: 268 CVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYN 327

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            +I+  CK  +++DA+ +   M      P   TYN+L+ GL   G   +A +L++     
Sbjct: 328 AMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIAR 386

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
              P   TF   I+G CK   + +A++V   + + KC+L ++ Y  LI+ L K  RLK A
Sbjct: 387 GFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEA 446

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
               + +   G  P+VV  +++I   CK G++  A ++    E + C P+  T+ +L+ G
Sbjct: 447 KDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYG 506

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
            +Q+ K  K + L+ KM  + +    ++ ++    L+    K  E  N FR
Sbjct: 507 LIQDQKLHKAMALITKMQEDGITPGVITYTT----LIQGQCKKHEFDNAFR 553



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 153/352 (43%), Gaps = 19/352 (5%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++++LL  L K K+ +  +S+  ++   G+  ++    ++I+ + K G    A  +   +
Sbjct: 636 TYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEM 695

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           + S   P+ +T+   I+  C  GRI EA  L  ++      P+VVT+N  ING       
Sbjct: 696 ISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYM 755

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF----------------VDKAKEL 246
             A    + M++   A C+P+  TY  ++    K                   +D   +L
Sbjct: 756 DCAFSTLKRMID---ASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQL 812

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L +M    +NP  +TY+S+I GFC     +EA  L   M+   + P+   +  +I   C 
Sbjct: 813 LERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCD 872

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
               +K    +  MI+ G  P   +Y+ L+ G C  G   +A+ LF  ++     H+  +
Sbjct: 873 IKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVA 932

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           + IL +   K   V+    L   M +   R    TY+ + + + +   + ++
Sbjct: 933 WKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYES 984



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 1/215 (0%)

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           DA+   R    +R+  S   YN  L  L +        KL  ++    ++PD+ T+ T I
Sbjct: 131 DAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMI 190

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
              CK G +  A + F+ +R    E+   T N L+ G C+ G L+ AC L   +   G  
Sbjct: 191 MAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCR 250

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            +  + + +I  LC+   + +A  LLL M    C P+  T+  L+RG  +  +     VL
Sbjct: 251 RNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVL 310

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           L +M    +V S  + ++ ++D   K  + ++ L 
Sbjct: 311 LDEMPRRGVVPSVWTYNA-MIDGYCKSGRLKDALG 344



 Score = 45.4 bits (106), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 3/117 (2%)

Query: 452 EAVQVFQAIRNC---KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
           EAV   QAIR     +  L  + YN  +  L +    +   KL+ +L  +G +PD VT +
Sbjct: 128 EAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYN 187

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           TMI   CKEG +  A+     +          T   LL G+ +     K   LL  M
Sbjct: 188 TMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMM 244


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 260/505 (51%), Gaps = 4/505 (0%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           +  +  L+    +  Q D    +   +   G+ P++      I   C+      AF +  
Sbjct: 204 VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYE 263

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            ++R+    + VT + L+ GLC +GR  EA  LF++++     PN VT+ TLI+ L +  
Sbjct: 264 GMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAG 323

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
                L L  EMV+  G +   D+VTY +++D L K G  D+ K+ L      N++PN +
Sbjct: 324 RGKELLSLLGEMVSR-GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV 380

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY  LI   C   +  EA+ + +EM +  + P+VVTF+++IN   K G +DK      +M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            +RG+NP+ VTY +L+DGF        A E++  M+ +G + + +  + L+N   ++ K+
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           E+A+ L+++     +    + Y TL+ GLF+ G++  A K   ++   +++PD+  +  +
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+ LC  G   EA      +RN   +    TYN +I   C+ G    A KL H ++    
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P+++T +T++  L   G ++KA  LL +M +    PS +T   +L+   Q +++  V++
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ-SRRLDVIL 679

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLL 585
            +H+      + +D+++ + ++ +L
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 241/514 (46%), Gaps = 3/514 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M K+  +P   ++  L+  LAK  +   ++SL   + S G+  DL     L
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ L K G T      L   L    +PN VT+  LI+ LC    + EA ++  ++   + 
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVVTF+++ING  + R  L     ++ M+ E G    P+VVTY ++IDG  K    D 
Sbjct: 411 SPNVVTFSSVINGFVK-RGLLDKATEYKRMMKERG--INPNVVTYGTLIDGFFKFQGQDA 467

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+   M    +  N    +SL+ G       +EA  LF +   +G+  D V +  +I+
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G M    +  + ++ R + PD V YN  ++  C++G+   A+     M + G + 
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +YN +I ++C+  +   A+ L  EM    I+P++ITYNTL++GLF  G +  A  L+
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M      P S T    +    ++  +   + + + + N      I  YN L+  LC  
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G  + A  +   +   G  PD +T + +I   CK   +D A      M  +N  P+  TF
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            TLL G     +  +   +L +M    L  ++L+
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLT 801



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 244/565 (43%), Gaps = 67/565 (11%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++T L+  L K  + D V    +   S+ L P+     +LI+ LCK      A  VL 
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            +     +PN VTF+ +ING    G + +A    + +     +PNVVT+ TLI+G  + +
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463

Query: 201 NTLVALKLFEEM------VNEF--------------------------GAICKPDVVTYN 228
               AL+++ +M      VN+F                          G+    D V Y 
Sbjct: 464 GQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++IDGL K G +  A +   ++ DRN+ P+ + YN  I   C +  +KEAK    EM + 
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNM 583

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G++PD  T+N MI  +C+ G+  K  +LL  M    + P+ +TYN+L+ G    G + +A
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643

Query: 349 RELFVSMVS-----------------------------------KGCRHDVYSYNILINA 373
           + L   MVS                                    G   D+  YN L+  
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C       A  +  EML   I P  IT+N L+ G  +  +L +A     +M   ++ P+
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             TF T + GL   G + EA  V   +     E    TY+ L  G  K      A +L+ 
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYC 823

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +  KG +P V T + +I    K G M +A +L  DM+ +   P+  T+  L+ G+ +  
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIR 883

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLS 578
             ++V   L  M  +    S  +LS
Sbjct: 884 NGTEVKKCLKDMKEKGFSPSKGTLS 908



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/546 (25%), Positives = 245/546 (44%), Gaps = 34/546 (6%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           LS +   +G +    ++   K+ N+   E V     M +   SP + +F+ ++    K  
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE--MEEKSISPNVVTFSSVINGFVKRG 428

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
             D      + +   G+ P++     LI+   K      A  V   +L      N    +
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            L+NGL   G+I EA  LFK  +      + V + TLI+GL +  +   A K  +E+++ 
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 216 ------------FGAIC--------------------KPDVVTYNSIIDGLCKDGFVDKA 243
                          +C                    KPD  TYN++I   C+ G   KA
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +LL +MK  +I PN+ITYN+L+ G       ++AK L  EM+  G  P  +T   ++  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             +  ++D +  + E M+  G++ D   YN+L+   C  G   +A  +   M+  G   D
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             ++N LI  +CK   +++A   Y +ML + I P++ T+NTLL GL  VG +G+A  ++ 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+ + + P++ T+     G  K    +EA++++  +       ++ TYN LI+   K G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A +LF  +Q +G  P   T   ++    +     +    L DM+ K   PS+ T  
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 544 TLLRGF 549
            + R F
Sbjct: 909 FICRAF 914



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 234/523 (44%), Gaps = 79/523 (15%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P     N+L+  L      + A  VL  + +     + VT N L+ GLC  G++  AA L
Sbjct: 101 PTTVAYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 174 FKKLN-VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
             +   + A D  V+ +NTLI G CR  +T  AL + + M  +   +   DVV YN+++ 
Sbjct: 158 ADRGGGIHALD--VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPM---DVVGYNTLVA 212

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G C+ G VD A+ +L  MK+  ++PNV TY   I  +C     +EA  L+  M+ NGV  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           DVVT +A++   C+DG+  +   L   M + G  P+ VTY +L+D     GR      L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 353 VSMVSKGCRHDV-----------------------------------YSYNILINANCKD 377
             MVS+G   D+                                    +Y +LI+A CK 
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             V++A  +  EM  + I P+V+T++++++G  + G L  A +    M+   + P+  T+
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 438 ATYIDG-----------------LC------------------KNGFVLEAVQVFQAIRN 462
            T IDG                 LC                  +NG + EA+ +F+    
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
               L    Y  LI+GL K G + TA K    L  +  +PD V  +  I+ LC  G+  +
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           A   L +M      P + T+ T++    +  + +K + LLH+M
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 203/423 (47%), Gaps = 22/423 (5%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP----DVVTYNSIIDGLCKDGF 239
           P  V +N L+  L    +   A  +  EM       CK     D VT N+++ GLC++G 
Sbjct: 101 PTTVAYNILLAALSDHAH---APAVLAEM-------CKRGVPFDGVTVNTLLAGLCRNGQ 150

Query: 240 VDKAKELLLQMKDRNINP---NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           VD A  L     DR       +VI +N+LI G+C V D   A  +   M   G+  DVV 
Sbjct: 151 VDAAAAL----ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVG 206

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N ++   C+ G++D    +L++M + GV+P+  TY   +  +C    +  A +L+  MV
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G   DV + + L+   C+D +  +A  L+REM      P+ +TY TL+  L + G   
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGK 326

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           + L L+ +M    VV D  T+   +D L K G   E     +   +        TY  LI
Sbjct: 327 ELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           + LCK   +  A ++   ++ K   P+VVT S++I+   K G +DKA +    M+ +   
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           P+ VT+ TL+ GF +   +   + + H M  E + V+   + S +V+ L ++ K  E + 
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS-LVNGLRQNGKIEEAMA 505

Query: 597 QFR 599
            F+
Sbjct: 506 LFK 508



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 211/457 (46%), Gaps = 14/457 (3%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D   LN L+   C++ +   A      +LRS   P TV +N L+  L        A  + 
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIA----LLRSS-RPTTVAYNILLAALSDHA---HAPAVL 123

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            ++       + VT NTL+ GLCR      A  L     +  G I   DV+ +N++I G 
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL----ADRGGGIHALDVIGWNTLIAGY 179

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           C+ G    A  +  +M  + +  +V+ YN+L+ GFC       A+ +   M + GV P+V
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            T+   I Y C+   +++   L E M++ GV  D VT ++L+ G C  GR S A  LF  
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M   G   +  +Y  LI++  K  + ++ + L  EM+S  +   ++TY  L+  L + G 
Sbjct: 300 MDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359

Query: 415 LGDALKLIDKMQLND-VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
             D +K   +  L+D + P+  T+   ID LCK   V EA QV   +        + T++
Sbjct: 360 T-DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFS 418

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +ING  K G L  A +    ++ +G  P+VVT  T+I    K    D A ++  DM  +
Sbjct: 419 SVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
               ++    +L+ G  QN K  + + L    +   L
Sbjct: 479 GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGL 515



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 189/451 (41%), Gaps = 35/451 (7%)

Query: 43  DGTSIAKFLNDRHKSG---NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT 99
           +G  + KF+ D   +G   N    EA+  F        S    ++T L+  L K     T
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
                + L    + PD  V N+ INCLC +G    A   L  +      P+  T+N +I 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---- 215
             C +G   +A +L  ++ + +  PN++T+NTL+ GL  T     A  L  EMV+     
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657

Query: 216 ----------------------------FGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
                                         A    D+  YN+++  LC  G   KA  +L
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M    I P+ IT+N+LI G C       A   + +M+   + P++ TFN ++      
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G++ +   +L  M + G+ P+ +TY+ L  G         A  L+  MV KG    V +Y
Sbjct: 778 GRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTY 837

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N LI+   K   +  A  L+++M    + P+  TY+ L+SG  ++ N  +  K +  M+ 
Sbjct: 838 NALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
               P   T +       K G   +A ++ +
Sbjct: 898 KGFSPSKGTLSFICRAFSKPGMTWQAQRLLK 928


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/437 (32%), Positives = 239/437 (54%), Gaps = 13/437 (2%)

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           N +  D+ VL    N   ++G     F    R     +  + ++   L+  L  + R  +
Sbjct: 152 NSIIADMLVLAYANNSRFELG-----FEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSAD 206

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
              L+K++      PNV TFN +IN LC+T     A  + E+M   +G    P+VV+YN+
Sbjct: 207 VEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM-KVYG--YSPNVVSYNT 263

Query: 230 IIDGLCK---DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           +IDG CK   +G + KA  +L +M +  ++PN+ T+N LI GF   D+   +  +F EM+
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEML 323

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           D  V P+V+T+N++IN  C  GK+++   + + M+  GV P+ +TY+SL++GFC  G + 
Sbjct: 324 DQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMK 383

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A ++F S+  +G R     YN+LI+A CK  K++D   L  EM  E I P V TYN L+
Sbjct: 384 EALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           +GL + GN+  A KL D++  N  +PD  TF   ++G C  G   +A  + + +     +
Sbjct: 444 AGLCRNGNIEAAKKLFDQLT-NKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLK 502

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP-DVVTCSTMIHWLCKEGQMDKAND 525
            R  TYN ++ G CK G LK A  +  +++ +  +  +V + + ++    ++G+++ AN 
Sbjct: 503 PRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562

Query: 526 LLLDMEAKNCVPSEVTF 542
           LL +M  K  VP+ +T+
Sbjct: 563 LLNEMLEKGLVPNRITY 579



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 209/393 (53%), Gaps = 8/393 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S +  Y +  MI+ K  P + +F +++  L K  + +    + + +   G  P++   N 
Sbjct: 204 SADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNT 263

Query: 122 LINCLCKMGITSGAF---VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           LI+  CK+G     +    VL  ++ +  +PN  TFN LI+G   +  +  + ++FK++ 
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEML 323

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                PNV+T+N+LINGLC       A+ + ++MV+   A  +P+++TY+S+I+G CK+G
Sbjct: 324 DQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVS---AGVQPNLITYHSLINGFCKNG 380

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            + +A ++   +K +   P    YN LI  +C +    +   L  EM   G+ PDV T+N
Sbjct: 381 MMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I   C++G ++   +L + +  +G+ PD VT++ LM+G+C  G   +A  L   M   
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKM 499

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVITYNTLLSGLFQVGNLGD 417
           G +    +YNI++   CK+  ++ A  +  +M  ER +R +V +YN LL G  Q G L D
Sbjct: 500 GLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           A  L+++M    +VP+  T+    + +   GFV
Sbjct: 560 ANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFV 592



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 180/355 (50%), Gaps = 11/355 (3%)

Query: 70  DCMIKMKP---SPGMTSFTILLT---MLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           D M  MK    SP + S+  L+     L  N +     ++ K +  N + P+L   N+LI
Sbjct: 244 DVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILI 303

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +   K     G+  V   +L     PN +T+N LINGLC  G+I EA  +  K+      
Sbjct: 304 DGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQ 363

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN++T+++LING C+      AL +F+ +    G   +P    YN +ID  CK G +D  
Sbjct: 364 PNLITYHSLINGFCKNGMMKEALDMFDSVK---GQGTRPTTRMYNMLIDAYCKLGKIDDG 420

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L  +M+   I P+V TYN LI G C   + + AK LF ++ + G+ PD+VTF+ ++  
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEG 479

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGCRH 362
            C  G+  K   LL+ M + G+ P  +TYN +M G+C  G +  A  +   M   +  R 
Sbjct: 480 YCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRM 539

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +V SYN+L+    +  K+EDA  L  EML + + P+ ITY  +   +   G + D
Sbjct: 540 NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPD 594



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 135/250 (54%), Gaps = 3/250 (1%)

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           K  +   V  L + MI+R + P+  T+N +++  C  G++++AR++   M   G   +V 
Sbjct: 200 KQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVV 259

Query: 366 SYNILINANCK---DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           SYN LI+  CK   + K+  A  + +EM+   + P++ T+N L+ G ++  NL  +LK+ 
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVF 319

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M   DV+P+  T+ + I+GLC  G + EA+ +   + +   +  + TY+ LING CK 
Sbjct: 320 KEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKN 379

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G +K A  +F  ++ +G  P     + +I   CK G++D    L  +ME +  VP   T+
Sbjct: 380 GMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439

Query: 543 CTLLRGFVQN 552
             L+ G  +N
Sbjct: 440 NCLIAGLCRN 449



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 122/240 (50%), Gaps = 3/240 (1%)

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           LM       R +    L+  M+ +  + +V+++N++INA CK  K+  A  +  +M    
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALK---LIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
             P+V++YNTL+ G  ++G  G   K   ++ +M  N+V P+  TF   IDG  K+  + 
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
            +++VF+ + +      + TYN LINGLC  G++  A  +  ++   G  P+++T  ++I
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           +  CK G M +A D+   ++ +   P+   +  L+  + +  K      L  +M  E +V
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 3/119 (2%)

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK---EGQM 520
           K +  + T+N +IN LCK G++  A  +   ++  G  P+VV+ +T+I   CK    G+M
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKM 277

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            KA+ +L +M      P+  TF  L+ GF +++     + +  +M  + ++ + ++ +S
Sbjct: 278 YKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNS 336


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 237/473 (50%), Gaps = 6/473 (1%)

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           ++ F+ +  +G+ PD+   N ++  L           V   +L+    P  VT+N L++ 
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252

Query: 161 LCAEGRIMEAARLFKKLNV--FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
              EGR  EA+ L K++      C  N VT+N +I+ L R  +   A KL + M      
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-- 310

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
             K    TYN +I  L + GFV K + L ++M++  I P ++TYN++I G    +  + A
Sbjct: 311 --KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAA 368

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           +  F EM   G+ PD++T+N+M+N  CK G + +   LL  + + G+ P  +TYN+L+DG
Sbjct: 369 QLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDG 428

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C +G +  AR L   MV +GC  DV +Y IL+N + K + +  A   + EMLS+ ++P 
Sbjct: 429 YCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPD 488

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              YNT +     +G+   A +L + M L  + PD+ T+   IDGLCK G + +A  +  
Sbjct: 489 CFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKM 548

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            + +   +    TY CLI+  C+ G L  A KL + +   G  P VVT + +IH  C+ G
Sbjct: 549 KMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRG 608

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +  A      M      P+E+T+  L+    +  +        H+M    L 
Sbjct: 609 NLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLA 661



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 245/491 (49%), Gaps = 8/491 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P +     +L +L    ++D V ++++ +    + P +   N L++   K G    A +
Sbjct: 205 APDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASM 264

Query: 138 VLGRILR---SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           +L  +      C   N VT+N +I+ L  EG +  AA+L   + + +   +  T+N LI 
Sbjct: 265 LLKEMETQGGGCLL-NDVTYNVVISFLAREGHLENAAKLVDSMRL-SKKASSFTYNPLIT 322

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
            L           L  EM NE G +  P +VTYN+II GL K   V+ A+    +M+   
Sbjct: 323 ALLERGFVQKVEALQMEMENE-GIM--PTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMG 379

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + P++ITYNS++ G+C   + KEA  L  ++   G+ P V+T+N +I+  C+ G +++  
Sbjct: 380 LLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEAR 439

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           RL E M+++G  PD  TY  LM+G   V  +  ARE F  M+SKG + D ++YN  I A 
Sbjct: 440 RLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAE 499

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
                   A  L   M+ + I P  +TYN ++ GL + GNL DA  L  KM  + + PD 
Sbjct: 500 LILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDC 559

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   I   C+ G + EA ++   + +   +  + TY  LI+  C+ G L +A   F +
Sbjct: 560 ITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRK 619

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +   G  P+ +T + +IH LC+ G+   A     +M  +   P++ T+  L+ G  +   
Sbjct: 620 MLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGN 679

Query: 555 KSKVVVLLHKM 565
            +  + L  +M
Sbjct: 680 WADAIRLYFEM 690



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 239/481 (49%), Gaps = 8/481 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVLNLLINCLCK 128
           M++++  P + ++  LL    K  + D    L K + + G   L  D+   N++I+ L +
Sbjct: 234 MLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDV-TYNVVISFLAR 292

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A  ++   +R     ++ T+N LI  L   G + +   L  ++      P +VT
Sbjct: 293 EGHLENAAKLVDS-MRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVT 351

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N +I+GL ++     A   F EM    G +  PD++TYNS+++G CK G + +A  LL 
Sbjct: 352 YNAIIHGLLKSEQVEAAQLKFAEM-RAMGLL--PDLITYNSMLNGYCKAGNLKEALWLLG 408

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            ++   + P V+TYN+LI G+C +   +EA+ L  EM++ G  PDV T+  ++N + K  
Sbjct: 409 DLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVR 468

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            +       + M+ +G+ PD   YN+ +    ++G   +A +L   M+ KG   D  +YN
Sbjct: 469 NLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYN 528

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           ++I+  CK   ++DA  L  +M+S+ ++P  ITY  L+    + G L +A KL++ M  +
Sbjct: 529 VIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSD 588

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            + P   T+   I   C+ G +  A   F+ + +   E    TYN LI+ LC+ GR   A
Sbjct: 589 GLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLA 648

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
              FH +  +G  P+  T + +I   C+EG    A  L  +M      P   T   L +G
Sbjct: 649 YHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 708

Query: 549 F 549
           F
Sbjct: 709 F 709



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 199/382 (52%), Gaps = 4/382 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  ++  L K++Q +     F  + + GL PDL   N ++N  CK G    A  +
Sbjct: 347 PTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWL 406

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           LG + R+   P  +T+N LI+G C  G + EA RL +++    C P+V T+  L+NG  +
Sbjct: 407 LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHK 466

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            RN  +A + F+EM+++     +PD   YN+ I      G   KA +L   M  + I P+
Sbjct: 467 VRNLPMAREFFDEMLSKG---LQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPD 523

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +TYN +I G C   + K+AK L ++M+ +G+QPD +T+  +I+ +C+ G + +  +LL 
Sbjct: 524 TVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLN 583

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+  G+ P  VTY  L+   C  G +  A   F  M+  G   +  +YN+LI+A C+  
Sbjct: 584 GMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTG 643

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +   A   + EML   + P+  TY  L+ G  + GN  DA++L  +M  N + PD  T  
Sbjct: 644 RTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHN 703

Query: 439 TYIDGLCKNGFVLEAVQVFQAI 460
               G  K G +  A++  + I
Sbjct: 704 ALFKGFDK-GHMYHAIEYLENI 724



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 11/324 (3%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN   K+GN+   EA++    + +   +P + ++  L+    +    +    L + +  
Sbjct: 390 MLNGYCKAGNL--KEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVE 447

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE---GR 166
            G FPD+    +L+N   K+     A      +L     P+   +N  I   CAE   G 
Sbjct: 448 QGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRI---CAELILGD 504

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
             +A +L + + +    P+ VT+N +I+GLC+T N   A  L  +MV++     +PD +T
Sbjct: 505 THKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDG---LQPDCIT 561

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y  +I   C+ G + +A++LL  M    + P+V+TY  LI   C   +   A   F +M+
Sbjct: 562 YTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKML 621

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           D G++P+ +T+N +I+  C+ G+          M++RG+ P+  TY  L+DG C  G  +
Sbjct: 622 DVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWA 681

Query: 347 RARELFVSMVSKGCRHDVYSYNIL 370
            A  L+  M   G   D  ++N L
Sbjct: 682 DAIRLYFEMHQNGIPPDYCTHNAL 705



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 10/284 (3%)

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
           C   C+  ++   C       +GV PDV   N ++       + D V  +   M+Q  + 
Sbjct: 188 CSTLCLAAFRVVAC-------HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIE 240

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSK--GCRHDVYSYNILINANCKDQKVEDAV 384
           P  VTYN+L+D F   GR   A  L   M ++  GC  +  +YN++I+   ++  +E+A 
Sbjct: 241 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAA 300

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L   M   + + S  TYN L++ L + G +     L  +M+   ++P   T+   I GL
Sbjct: 301 KLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGL 359

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K+  V  A   F  +R       + TYN ++NG CK G LK A  L   L+  G  P V
Sbjct: 360 LKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTV 419

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           +T +T+I   C+ G +++A  L  +M  + C P   T+  L+ G
Sbjct: 420 LTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNG 463



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 13/237 (5%)

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  +   G   DV   N ++       + +D   +YREML   I P+++TYNTLL    +
Sbjct: 196 FRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLK 255

Query: 412 VGNLGDALKLIDKMQ-------LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            G   +A  L+ +M+       LNDV     T+   I  L + G +  A ++  ++R  K
Sbjct: 256 EGRKDEASMLLKEMETQGGGCLLNDV-----TYNVVISFLAREGHLENAAKLVDSMRLSK 310

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                 TYN LI  L + G ++    L   ++++G +P +VT + +IH L K  Q++ A 
Sbjct: 311 KASSF-TYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQ 369

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
               +M A   +P  +T+ ++L G+ +     + + LL  +    L  + L+ ++ +
Sbjct: 370 LKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLI 426



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    + M+     P + ++TIL+    +     +    F+++   G+ P+    N+L
Sbjct: 576 SEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 635

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC+ G T  A+     +L     PN  T+  LI+G C EG   +A RL+ +++    
Sbjct: 636 IHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI 695

Query: 183 DPNVVTFNTLING 195
            P+  T N L  G
Sbjct: 696 PPDYCTHNALFKG 708


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 155/503 (30%), Positives = 250/503 (49%), Gaps = 39/503 (7%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           + +L KN  +D V   +    S GL    F  +  I+ LC+         +L  + R  F
Sbjct: 197 IGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGF 256

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           +P+    N  I+ LC + R+ +A ++ +K+      P+VVT+ T++  LC  +    A+ 
Sbjct: 257 SPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVG 316

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L+EEMV + G   KPDVV   ++I GLCK+  V++A EL  +M   NI  +V  YN+LI 
Sbjct: 317 LWEEMV-KMG--LKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALIS 373

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GF       +A  +   M  NG +P VVT+N ++N+ C  G M+K   L+  M   GVNP
Sbjct: 374 GFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNP 433

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  +YN L+ G C   ++ +A       +  G   D+ S NILI+A CK +KV+ A+ L+
Sbjct: 434 DRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELF 493

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           +EM  + ++   +TY TL++GLF VG    A +L ++M    + P+              
Sbjct: 494 KEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPN-------------- 539

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
                                +  YN +++ LCK+G LK A K+F  +  K  +PD+VT 
Sbjct: 540 ---------------------VNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTY 578

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +T+I+WL K  +  +A DL  DM  K   P  +TF  L+ G +   + +    +   M  
Sbjct: 579 NTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYM-M 637

Query: 568 EKLVVSDLSLSSKVVDLLSKDKK 590
           E  ++ D  +S +++ +L    K
Sbjct: 638 ENGIILDREVSERLISVLKLKNK 660



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 186/381 (48%), Gaps = 3/381 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + +  I +  L K  +    + + +++   G  PD+     ++ CLC     S A  
Sbjct: 257 SPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVG 316

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   +++    P+ V    LI GLC   ++ EA  L  ++     + +V  +N LI+G  
Sbjct: 317 LWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFW 376

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  +   A  +   M       C+P VVTYN +++  C  G ++KA+ L+ +M+   +NP
Sbjct: 377 RAGSIDKAYTIISFMRTNG---CEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNP 433

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +  +YN L+ G C      +A     + M+ G   D+V+ N +I+  CK  K+     L 
Sbjct: 434 DRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELF 493

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           + M  +G+  D VTY +L++G   VG  + A ELF  M+      +V  YNI+++  CK 
Sbjct: 494 KEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKV 553

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             ++ A  ++  M+ + I P ++TYNTL+  L +     +AL L   M+   V PDS TF
Sbjct: 554 GDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTF 613

Query: 438 ATYIDGLCKNGFVLEAVQVFQ 458
              I+GL   G    A +V++
Sbjct: 614 KYLINGLLDEGRSTLAYEVWE 634



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 179/356 (50%), Gaps = 5/356 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++T ++  L  NK++   V L++ +   GL PD+     LI  LCK      AF +
Sbjct: 293 PDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFEL 352

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             R+L      +   +N LI+G    G I +A  +   +    C+P VVT+N L+N  C 
Sbjct: 353 ASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYC- 411

Query: 199 TRNTLVALKLFEEMVNEF-GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
              T+  ++  E ++ +   +   PD  +YN ++ GLCK   +DKA   +    +     
Sbjct: 412 ---TIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFC 468

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           ++++ N LI  FC V   K A  LF EM   G+Q D VT+  +IN     G  +    L 
Sbjct: 469 DIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELF 528

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M++  ++P+   YN ++   C VG + RA+++F+ M+ K    D+ +YN LI    K+
Sbjct: 529 EQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKN 588

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            +  +A+ L+++M ++ + P  +T+  L++GL   G    A ++ + M  N ++ D
Sbjct: 589 SRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILD 644



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 163/333 (48%), Gaps = 3/333 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  ++ M+KM   P + +   L+  L KN + +    L  R+ S  +   + + N L
Sbjct: 312 SEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNAL 371

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   + G    A+ ++  +  +   P  VT+N L+N  C  G + +A  L  K+     
Sbjct: 372 ISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGV 431

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+  ++N L+ GLC+T     A     + + E G  C  D+V+ N +ID  CK   V  
Sbjct: 432 NPDRYSYNQLLKGLCKTHQLDKAFAFVSDHM-EVGGFC--DIVSCNILIDAFCKVKKVKS 488

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL  +M  + +  + +TY +LI G   V  +  A+ LF +M+   + P+V  +N M++
Sbjct: 489 ALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLH 548

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           + CK G + +  ++   MIQ+ + PD VTYN+L+       R   A +LF  M +KG   
Sbjct: 549 HLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEP 608

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           D  ++  LIN    + +   A  ++  M+   I
Sbjct: 609 DSLTFKYLINGLLDEGRSTLAYEVWEYMMENGI 641



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 187/435 (42%), Gaps = 5/435 (1%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D FV+NL++  L     T+  F       R  F  +     ++++ L  +G     +   
Sbjct: 86  DPFVVNLVVRGLSD-SETAVRFYWWAES-RPGFDHSQFAIAYIVSLLFVDGNFALLSEFL 143

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
             +       +   +  L++G  R       +  F+EMV    + C+   + YN  I  L
Sbjct: 144 GTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVM---SGCREFGIDYNRYIGVL 200

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
            K+   D  ++       + +     TY+  I   C  +  +  + L  +M   G  PD+
Sbjct: 201 IKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDI 260

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
              N  I+  CK  ++    +++E M  +G  PD VTY +++   C   R S A  L+  
Sbjct: 261 WACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEE 320

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           MV  G + DV +   LI   CK+ KVE+A  L   MLS  I  SV  YN L+SG ++ G+
Sbjct: 321 MVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGS 380

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A  +I  M+ N   P   T+   ++  C  G + +A  +   +          +YN 
Sbjct: 381 IDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQ 440

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L+ GLCK  +L  A          G   D+V+C+ +I   CK  ++  A +L  +M+ K 
Sbjct: 441 LLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKG 500

Query: 535 CVPSEVTFCTLLRGF 549
                VT+ TL+ G 
Sbjct: 501 MQADAVTYGTLINGL 515



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 159/303 (52%), Gaps = 7/303 (2%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N    EA      M+ +     ++ +  L++   +    D   ++   + +NG  P +  
Sbjct: 343 NSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVT 402

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA-ARLFKKL 177
            N+L+N  C +G+   A  ++ ++  S   P+  ++N L+ GLC   ++ +A A +   +
Sbjct: 403 YNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHM 462

Query: 178 NVFA-CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
            V   CD  +V+ N LI+  C+ +    AL+LF+EM  ++  + + D VTY ++I+GL  
Sbjct: 463 EVGGFCD--IVSCNILIDAFCKVKKVKSALELFKEM--DYKGM-QADAVTYGTLINGLFS 517

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G+ + A+EL  QM    I+PNV  YN ++   C V D K A+ +F+ M+   + PD+VT
Sbjct: 518 VGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVT 577

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I +  K+ +  +   L + M  +GV PD++T+  L++G    GR + A E++  M+
Sbjct: 578 YNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMM 637

Query: 357 SKG 359
             G
Sbjct: 638 ENG 640



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 182/419 (43%), Gaps = 8/419 (1%)

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           DP VV  N ++ GL  +     A++ +    +  G       + Y  I+  L  DG    
Sbjct: 86  DPFVV--NLVVRGLSDSET---AVRFYWWAESRPGFDHSQFAIAY--IVSLLFVDGNFAL 138

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
             E L  ++ + +  +   Y  L+ G+     +      F EM+ +G +   + +N  I 
Sbjct: 139 LSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIG 198

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+   D V +   + + +G+     TY+  +   C   RI    EL   M   G   
Sbjct: 199 VLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSP 258

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+++ NI I+  CK  ++ DA+ +  +M  +   P V+TY T++  L       +A+ L 
Sbjct: 259 DIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLW 318

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M    + PD       I GLCKN  V EA ++   + +   EL +  YN LI+G  + 
Sbjct: 319 EEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRA 378

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G +  A  +   ++  G  P VVT + +++  C  G M+KA +L+  ME     P   ++
Sbjct: 379 GSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSY 438

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             LL+G  + ++  K    +     E     D+   + ++D   K KK +  L  F+ +
Sbjct: 439 NQLLKGLCKTHQLDKAFAFVSD-HMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEM 496


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 259/487 (53%), Gaps = 5/487 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + S+  L+  LAK+      V LF  ++  G+ PD+   N+LI+   + G    A  
Sbjct: 181 NPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANE 240

Query: 138 VLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
           +  R+L  S   P+  T+N +INGLC  G++ E+  ++ ++      P++ TF+++I+GL
Sbjct: 241 IWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGL 300

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
            +  N   A K+F+EM+ E G    PDV TYN+++ GL + G ++K  EL   M   N  
Sbjct: 301 SKAGNFNAAEKVFQEMI-ESG--LSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC- 356

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
            N+++YN LI G       ++A C +  + + G++ D  T+  +IN  CK+G ++K  R+
Sbjct: 357 CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRI 416

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           LE     G + DT  Y+S++ G C  G + +A EL   M     + + + +N LIN   +
Sbjct: 417 LEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVR 476

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             K+E+A+ + REM S+   P+V++YNT+++GL +     DA   + +M    + PD  T
Sbjct: 477 AFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMIT 536

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++  IDGLC+   V  A+ ++    N + +  ++ +N +I+GLC   ++  A ++F +++
Sbjct: 537 YSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMR 596

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
               +PD+VT +T++  L K G   +A  +   +      P  +++    +G     + S
Sbjct: 597 QVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVS 656

Query: 557 KVVVLLH 563
             +  L+
Sbjct: 657 DAIEFLY 663



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 268/524 (51%), Gaps = 37/524 (7%)

Query: 63  NEAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++A+  F  M+ +   +PG+ SF  +L    ++ Q+      F    + G+ P+L   N+
Sbjct: 95  DQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNI 154

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI   CK         +L  +  +   P+ +++  LIN L   G +++A  LF +++V  
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRG 214

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +P+V+ +N LI+G  R  + + A ++++ ++ E  +   P V TYN +I+GLCK G +D
Sbjct: 215 VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTE--SSVYPSVETYNIMINGLCKLGKLD 272

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           ++ E+  +MK    +P++ T++S+I G     ++  A+ +F EM+++G+ PDV T+NAM+
Sbjct: 273 ESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAML 332

Query: 302 NYNCKDGKMDKVNRL----------------------------------LELMIQRGVNP 327
           +   + GK++K   L                                   +L+ +RG+  
Sbjct: 333 SGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKA 392

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D+ TY  L++G C  G +++A  +     ++G   D ++Y+ +++  CK   +E AV L 
Sbjct: 393 DSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELI 452

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            +M   R + +   +N+L++G  +   L +A+ ++ +M+  D  P   ++ T I+GLCK 
Sbjct: 453 HQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKA 512

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
               +A    + +     +  + TY+ LI+GLC+  ++  A  L+H+  +K   PD+   
Sbjct: 513 ERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMH 572

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           + +IH LC   ++D A ++   M   NCVP  VT  T++ G  +
Sbjct: 573 NIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYK 616



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 264/513 (51%), Gaps = 9/513 (1%)

Query: 92  AKNKQYDTVVSLFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
           AK    D  ++LF+ + +  G  P +   N ++N   +      A +       +  +PN
Sbjct: 89  AKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPN 148

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
             T+N LI   C + +  +   L   +     +P+++++ TLIN L ++ N L A++LF+
Sbjct: 149 LQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFD 208

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLICGF 269
           EM         PDV+ YN +IDG  + G   KA E+  ++  + ++ P+V TYN +I G 
Sbjct: 209 EMSVRG---VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGL 265

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C +    E+  ++  M  N   PD+ TF++MI+   K G  +   ++ + MI+ G++PD 
Sbjct: 266 CKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDV 325

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN+++ G    G++++  EL+  M    C  ++ SYN+LI     ++KVE A+C Y +
Sbjct: 326 RTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAIC-YWQ 383

Query: 390 MLSER-IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           +L ER ++    TY  L++GL + G L  AL+++++ +      D+F +++ + GLCK G
Sbjct: 384 LLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKG 443

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + +AV++   ++  + +L    +N LING  +  +L+ A  +   ++ K   P VV+ +
Sbjct: 444 MLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYN 503

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I+ LCK  +   A   L +M  +   P  +T+  L+ G  +  K    + L H+   +
Sbjct: 504 TIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINK 563

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +L   DL + + ++  L   +K    L  F  +
Sbjct: 564 RL-KPDLQMHNIIIHGLCTAQKVDVALEIFTQM 595



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 251/503 (49%), Gaps = 38/503 (7%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   KSGN+   +AV  FD M     +P +  + IL+    +   +     
Sbjct: 183 DILSYGTLINALAKSGNLL--DAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANE 240

Query: 103 LFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           ++KRL   + ++P +   N++IN LCK+G    +  +  R+ ++  +P+  TF+ +I+GL
Sbjct: 241 IWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGL 300

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT---------------------- 199
              G    A ++F+++      P+V T+N +++GL RT                      
Sbjct: 301 SKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIV 360

Query: 200 -RNTLVALKLFEEMVNEFGAIC----------KPDVVTYNSIIDGLCKDGFVDKAKELLL 248
             N L+   L  + V +  AIC          K D  TY  +I+GLCK+G+++KA  +L 
Sbjct: 361 SYNMLIQGLLDNKKVEQ--AICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILE 418

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           + ++   + +   Y+S++ G C     ++A  L  +M  N  + +   FN++IN   +  
Sbjct: 419 EAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAF 478

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           K+++   +L  M  +   P  V+YN++++G C   R S A      M+ +G + D+ +Y+
Sbjct: 479 KLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYS 538

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           +LI+  C+ +KV+ A+ L+ + +++R++P +  +N ++ GL     +  AL++  +M+  
Sbjct: 539 LLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQV 598

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
           + VPD  T  T ++GL K G  +EA++++  I     +  I +YN    GLC   R+  A
Sbjct: 599 NCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDA 658

Query: 489 CKLFHRLQHKGPIPDVVTCSTMI 511
            +  +    +G +P+  T + ++
Sbjct: 659 IEFLYDALDRGILPNAPTWNVLV 681



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 160/317 (50%), Gaps = 3/317 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+ ++  + +       T++ +L+  L KN   +  + + +   + G   D F  + ++
Sbjct: 377 QAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMV 436

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G+   A  ++ ++ ++    N+  FN LING     ++ EA  + +++    C 
Sbjct: 437 HGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCA 496

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P VV++NT+INGLC+      A    +EM+ E     KPD++TY+ +IDGLC+   VD A
Sbjct: 497 PTVVSYNTIINGLCKAERFSDAYLSLKEMLEEG---LKPDMITYSLLIDGLCRGEKVDMA 553

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L  Q  ++ + P++  +N +I G C       A  +F +M      PD+VT N ++  
Sbjct: 554 LNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEG 613

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G   +  ++ + +++ G+ PD ++YN    G C   R+S A E     + +G   +
Sbjct: 614 LYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPN 673

Query: 364 VYSYNILINANCKDQKV 380
             ++N+L+ A   D+ +
Sbjct: 674 APTWNVLVRAVVDDKPL 690


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 247/498 (49%), Gaps = 17/498 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  ++++ ++ +L    + D    LF+ + SN + PD+F   +LI+  CK+G+   A   
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              ++R    PN VT+  LI+      ++  A  LF+ +    C PNVVT+  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 199 TRNTLVALKLFEEMVN-------------EFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           +     A +++  M               + G I  P++ TY +++DGLCK   V +A++
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           LL  M      PN I Y++LI GFC V    EA+ +F +M + G  P+V T++++I+   
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           KD ++D   ++L  M++    P+ + Y  ++DG C VG+   A  L   M  KGC  +V 
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVV 777

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y  +I+   K  KV+  + L R+M ++   P+ +TY  L++     G L DA +L+D+M
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +          +   I+G  +  F++    + +   N    + I  Y  LI+  CK GRL
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNRE-FIISLGLLDEIAENVAVPI-IPAYRILIDSFCKAGRL 895

Query: 486 KTACKLFHRLQH--KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           + A +L   +         D    S++I  L    ++DKA +L  DM  +  +P    F 
Sbjct: 896 ELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFF 955

Query: 544 TLLRGFVQNNKKSKVVVL 561
            L++G ++ N+  + + L
Sbjct: 956 YLVKGLIRINRWEEALQL 973



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 256/580 (44%), Gaps = 64/580 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  L+ +  +  + DT   + + ++ +G   D + L   ++ LCK G    A   
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA--- 286

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  I +  F  +TV +  +I+GLC      EA     ++   +C PNVVT+  L+ G  R
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            R      ++   M+ E    C P    +NS+I   C+ G    A +LL +M D    P 
Sbjct: 347 KRQLGRCKRILSMMITEG---CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 259 VITYNSLICG-----------------------------------------FCCVDDWKE 277
            + YN LI G                                          C    +++
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +  EMM  G  PD  T++ +I   C   K+D    L E M    V PD  TY  L+D
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC VG + +AR+ F  MV  GC  +V +Y  LI+A  K +K+  A  L+  MLSE   P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS----------------FTFATYI 441
           +V+TY  L+ G  + G +  A ++  +M+ N  +PD                 FT+   +
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCK   V EA  +   +    CE     Y+ LI+G CK+G+L  A  +F ++  +G  
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P+V T S++I  L K+ ++D A  +L  M   +C P+ + +  ++ G  +  K  +   L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +  M  EK    ++   + ++D   K  K  +CL   R +
Sbjct: 764 M-SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 239/532 (44%), Gaps = 68/532 (12%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +LN+LI   C+ G+ + A   LGR+    + P+ +T+N L+       R+  A  + +++
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           +    + +  T    ++ LC+      AL L E+   EF    K D V Y  +I GLC+ 
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK--EEF----KLDTVIYTQMISGLCEA 312

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC--LFIEMMDNGVQPDVV 295
              ++A + L +M+  +  PNV+TY  L+CG  C+   +  +C  +   M+  G  P   
Sbjct: 313 SLFEEAMDFLSRMRSSSCIPNVVTYRILLCG--CLRKRQLGRCKRILSMMITEGCYPSRR 370

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG----------------- 338
            FN++I+  C+ G      +LL+ M   G  P  V YN L+ G                 
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 339 ------------------------FCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
                                    C  G+  +A  +   M+SKG   D  +Y+ +I   
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   KV++A  L+ EM S  + P V TY  L+    +VG L  A K  D+M  +   P+ 
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   I    K   +  A ++F+ + +  C   + TY  LI+G CK G+++ AC+++ R
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 495 LQHKGPIPDV----------------VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           ++    IPDV                 T   ++  LCK  ++ +A DLL  M  + C P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            + +  L+ GF +  K  +  ++  KM +E+    ++   S ++D L KDK+
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKM-SERGYGPNVYTYSSLIDRLFKDKR 721



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 151/326 (46%), Gaps = 9/326 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D M      P    +  L+    K  + D    +F +++  G  P+++  + LI
Sbjct: 654 EARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLI 713

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L K      A  VL R+L +   PN + +  +I+GLC  G+  EA RL   +    C 
Sbjct: 714 DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDK 242
           PNVVT+  +I+G  +       L+L  +M    GA  C P+ VTY  +I+  C  G +D 
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQM----GAKGCAPNFVTYRVLINHCCAAGLLDD 829

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +MK      ++  Y  +I GF    ++  +  L  E+ +N   P +  +  +I+
Sbjct: 830 AHQLLDEMKQTYWPKHMAGYRKVIEGFN--REFIISLGLLDEIAENVAVPIIPAYRILID 887

Query: 303 YNCKDGKMDKVNRLLELMIQ--RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
             CK G+++    L + M         D   Y+SL++   L  ++ +A EL+  M+ +G 
Sbjct: 888 SFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGG 947

Query: 361 RHDVYSYNILINANCKDQKVEDAVCL 386
             ++  +  L+    +  + E+A+ L
Sbjct: 948 IPELSIFFYLVKGLIRINRWEEALQL 973



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 7/291 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M +    P + +++ L+  L K+K+ D  + +  R+  N   P++ +   +
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM 747

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK+G T  A+ ++  +      PN VT+  +I+G    G++ +   L +++    C
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VT+  LIN  C       A +L +EM   +       +  Y  +I+G  ++  +  
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTY---WPKHMAGYRKVIEGFNREFIISL 864

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD--NGVQPDVVTFNAM 300
              LL ++ +    P +  Y  LI  FC     + A  L  EM    +    D   ++++
Sbjct: 865 G--LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSL 922

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           I       K+DK   L   MI+RG  P+   +  L+ G   + R   A +L
Sbjct: 923 IESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 247/498 (49%), Gaps = 17/498 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  ++++ ++ +L    + D    LF+ + SN + PD+F   +LI+  CK+G+   A   
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              ++R    PN VT+  LI+      ++  A  LF+ +    C PNVVT+  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 199 TRNTLVALKLFEEMVN-------------EFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           +     A +++  M               + G I  P++ TY +++DGLCK   V +A++
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           LL  M      PN I Y++LI GFC V    EA+ +F +M + G  P+V T++++I+   
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           KD ++D   ++L  M++    P+ + Y  ++DG C VG+   A  L   M  KGC  +V 
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVV 777

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y  +I+   K  KV+  + L R+M ++   P+ +TY  L++     G L DA +L+D+M
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +          +   I+G  +  F++    + +   N    + I  Y  LI+  CK GRL
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNRE-FIISLGLLDEIAENVAVPI-IPAYRILIDSFCKAGRL 895

Query: 486 KTACKLFHRLQH--KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           + A +L   +         D    S++I  L    ++DKA +L  DM  +  +P    F 
Sbjct: 896 ELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFF 955

Query: 544 TLLRGFVQNNKKSKVVVL 561
            L++G ++ N+  + + L
Sbjct: 956 YLVKGLIRINRWEEALQL 973



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 256/580 (44%), Gaps = 64/580 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  L+ +  +  + DT   + + ++ +G   D + L   ++ LCK G    A   
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA--- 286

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  I +  F  +TV +  +I+GLC      EA     ++   +C PNVVT+  L+ G  R
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            R      ++   M+ E    C P    +NS+I   C+ G    A +LL +M D    P 
Sbjct: 347 KRQLGRCKRILSMMITEG---CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 259 VITYNSLICG-----------------------------------------FCCVDDWKE 277
            + YN LI G                                          C    +++
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +  EMM  G  PD  T++ +I   C   K+D    L E M    V PD  TY  L+D
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC VG + +AR+ F  MV  GC  +V +Y  LI+A  K +K+  A  L+  MLSE   P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS----------------FTFATYI 441
           +V+TY  L+ G  + G +  A ++  +M+ N  +PD                 FT+   +
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCK   V EA  +   +    CE     Y+ LI+G CK+G+L  A  +F ++  +G  
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P+V T S++I  L K+ ++D A  +L  M   +C P+ + +  ++ G  +  K  +   L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +  M  EK    ++   + ++D   K  K  +CL   R +
Sbjct: 764 M-SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 239/532 (44%), Gaps = 68/532 (12%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +LN+LI   C+ G+ + A   LGR+    + P+ +T+N L+       R+  A  + +++
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           +    + +  T    ++ LC+      AL L E+   EF    K D V Y  +I GLC+ 
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK--EEF----KLDTVIYTQMISGLCEA 312

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC--LFIEMMDNGVQPDVV 295
              ++A + L +M+  +  PNV+TY  L+CG  C+   +  +C  +   M+  G  P   
Sbjct: 313 SLFEEAMDFLSRMRSSSCIPNVVTYRILLCG--CLRKRQLGRCKRILSMMITEGCYPSRR 370

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG----------------- 338
            FN++I+  C+ G      +LL+ M   G  P  V YN L+ G                 
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 339 ------------------------FCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
                                    C  G+  +A  +   M+SKG   D  +Y+ +I   
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   KV++A  L+ EM S  + P V TY  L+    +VG L  A K  D+M  +   P+ 
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   I    K   +  A ++F+ + +  C   + TY  LI+G CK G+++ AC+++ R
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 495 LQHKGPIPDV----------------VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           ++    IPDV                 T   ++  LCK  ++ +A DLL  M  + C P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            + +  L+ GF +  K  +  ++  KM +E+    ++   S ++D L KDK+
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKM-SERGYGPNVYTYSSLIDRLFKDKR 721



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 151/326 (46%), Gaps = 9/326 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D M      P    +  L+    K  + D    +F +++  G  P+++  + LI
Sbjct: 654 EARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLI 713

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L K      A  VL R+L +   PN + +  +I+GLC  G+  EA RL   +    C 
Sbjct: 714 DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDK 242
           PNVVT+  +I+G  +       L+L  +M    GA  C P+ VTY  +I+  C  G +D 
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQM----GAKGCAPNFVTYRVLINHCCAAGLLDD 829

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +MK      ++  Y  +I GF    ++  +  L  E+ +N   P +  +  +I+
Sbjct: 830 AHQLLDEMKQTYWPKHMAGYRKVIEGFN--REFIISLGLLDEIAENVAVPIIPAYRILID 887

Query: 303 YNCKDGKMDKVNRLLELMIQ--RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
             CK G+++    L + M         D   Y+SL++   L  ++ +A EL+  M+ +G 
Sbjct: 888 SFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGG 947

Query: 361 RHDVYSYNILINANCKDQKVEDAVCL 386
             ++  +  L+    +  + E+A+ L
Sbjct: 948 IPELSIFFYLVKGLIRINRWEEALQL 973



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 7/291 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M +    P + +++ L+  L K+K+ D  + +  R+  N   P++ +   +
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM 747

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK+G T  A+ ++  +      PN VT+  +I+G    G++ +   L +++    C
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VT+  LIN  C       A +L +EM   +       +  Y  +I+G  ++  +  
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWP---KHMAGYRKVIEGFNREFIISL 864

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD--NGVQPDVVTFNAM 300
              LL ++ +    P +  Y  LI  FC     + A  L  EM    +    D   ++++
Sbjct: 865 G--LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSL 922

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           I       K+DK   L   MI+RG  P+   +  L+ G   + R   A +L
Sbjct: 923 IESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 251/487 (51%), Gaps = 3/487 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   S T+LL  L K KQ+   +++F  +  +   P  F+    I    K+        +
Sbjct: 515 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 574

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             R+     +P    +N LI+GLC   ++ +A +LF ++      P+++T+NTLI+G C+
Sbjct: 575 FNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCK 634

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             N   + K+ E M  +     +P ++T+N+++ GL K G V+ A+ +L +MKD+   P+
Sbjct: 635 DGNPEKSFKVRERMKADN---IEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPD 691

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             T++ L  G+   D    A  ++   +D+G++ +  T + ++N  CK+G+++K   +L 
Sbjct: 692 AFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILG 751

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
             + +G+ P+ V YN+++DG+   G +  AR    +M  +G + D  +YN LI   C+  
Sbjct: 752 REMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELG 811

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +E+A     +M  + + PSV TYN L+ G  +         L+ +M+ N  +P+  ++ 
Sbjct: 812 DMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYG 871

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T I+ LCK   +LEA  V + + +      +  YN LI+G C  G+++ A +    +  K
Sbjct: 872 TLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKK 931

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G   ++VT +T+I  L   G++ +A D+LL++  K   P   T+ +L+ G+       + 
Sbjct: 932 GIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRC 991

Query: 559 VVLLHKM 565
           + L  +M
Sbjct: 992 IALYEEM 998



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 141/534 (26%), Positives = 244/534 (45%), Gaps = 34/534 (6%)

Query: 68   FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
             F+ M   + SP +  + +L+  L K +Q      LF  + +  L P L   N LI+  C
Sbjct: 574  LFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYC 633

Query: 128  KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
            K G    +F V  R+      P+ +TFN L+ GL   G + +A  +  ++      P+  
Sbjct: 634  KDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAF 693

Query: 188  TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            TF+ L +G         AL ++E  V+   +  K +  T + +++ LCK+G ++KA+E+L
Sbjct: 694  TFSILFDGYSSNDKADAALGVYETAVD---SGLKMNAYTCSILLNALCKEGQIEKAEEIL 750

Query: 248  LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             +   + + PN + YN++I G+    D   A+     M   G++PD + +N +I   C+ 
Sbjct: 751  GREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCEL 810

Query: 308  GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            G M+   + +  M  +GV+P   TYN L+ G+       +  +L   M   G   +V SY
Sbjct: 811  GDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY 870

Query: 368  NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
              LIN  CK  K+ +A  + R+M    + P+V  YN L+ G    G + DA +  ++M  
Sbjct: 871  GTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFK 930

Query: 428  NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
              +  +  T+ T IDGL  NG + EA  +   I     +  + TYN LI+G    G ++ 
Sbjct: 931  KGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQR 990

Query: 488  ACKLFHRLQHKG--PI-----------------------------PDVVTCSTMIHWLCK 516
               L+  ++  G  P                              PD++  + ++H    
Sbjct: 991  CIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAV 1050

Query: 517  EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             G MDKA +L   M  K+    + T+ +L+ G ++  K  +V  L+ +M A ++
Sbjct: 1051 HGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREM 1104



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 252/519 (48%), Gaps = 8/519 (1%)

Query: 78   SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
             P + +F  LL  L K    +   ++   +   G  PD F  ++L +          A  
Sbjct: 654  EPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALG 713

Query: 138  VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            V    + S    N  T + L+N LC EG+I +A  +  +       PN V +NT+I+G  
Sbjct: 714  VYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYS 773

Query: 198  RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            R +  LV  ++  + + + G   KPD + YN +I   C+ G ++ A++ + +MK + ++P
Sbjct: 774  R-KGDLVGARMKIDAMEKQG--MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSP 830

Query: 258  NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
            +V TYN LI G+    ++ +   L  EM DNG  P+VV++  +IN  CK  K+ +   + 
Sbjct: 831  SVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 890

Query: 318  ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
              M  RGV+P+   YN L+DG C  G+I  A      M  KG   ++ +YN LI+    +
Sbjct: 891  RDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMN 950

Query: 378  QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             K+ +A  +  E+  + ++P V TYN+L+SG    GN+   + L ++M+ + + P   T+
Sbjct: 951  GKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTY 1010

Query: 438  ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
               I    K G  L   ++F  + + + +L +  YN +++     G +  A  L  ++  
Sbjct: 1011 HLLISLCTKEGIEL-TKKIFGEM-SLQPDLLV--YNGVLHCYAVHGDMDKAFNLQKQMIE 1066

Query: 498  KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
            K    D  T +++I    K G++ +   L+ +M+A+   P   T+  +++G  +      
Sbjct: 1067 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMG 1126

Query: 558  VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
              V   +M  EK ++ D+ +  ++V  L ++ + +E  N
Sbjct: 1127 AYVWYREM-QEKGLLLDVCIGDELVSGLKEEWRSKEAEN 1164



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 225/455 (49%), Gaps = 9/455 (1%)

Query: 81   MTSFT--ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
            M ++T  ILL  L K  Q +    +  R  + GL P+  + N +I+   + G   GA + 
Sbjct: 725  MNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMK 784

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            +  + +    P+ + +N LI   C  G +  A +   K+ +    P+V T+N LI G  R
Sbjct: 785  IDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGR 844

Query: 199  TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                     L +EM +  G +  P+VV+Y ++I+ LCK   + +A+ +   M+DR ++PN
Sbjct: 845  KYEFDKCFDLLKEMEDN-GTM--PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPN 901

Query: 259  VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            V  YN LI G C     ++A     EM   G++ ++VT+N +I+    +GK+ +   +L 
Sbjct: 902  VRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLL 961

Query: 319  LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
             + ++G+ PD  TYNSL+ G+   G + R   L+  M + G +  + +Y++LI+  C  +
Sbjct: 962  EISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISL-CTKE 1020

Query: 379  KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
             +E    ++ EM    ++P ++ YN +L      G++  A  L  +M    +  D  T+ 
Sbjct: 1021 GIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYN 1077

Query: 439  TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
            + I G  K G + E   +   ++  + E   +TY+ ++ G C+M     A   +  +Q K
Sbjct: 1078 SLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEK 1137

Query: 499  GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            G + DV     ++  L +E +  +A +++ +M  +
Sbjct: 1138 GLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGR 1172



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 183/365 (50%), Gaps = 10/365 (2%)

Query: 78   SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            SP + ++ IL+    +  ++D    L K +  NG  P++     LINCLCK      A +
Sbjct: 829  SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 888

Query: 138  VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            V   +     +PN   +N LI+G C++G+I +A R  +++     + N+VT+NTLI+GL 
Sbjct: 889  VKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLS 948

Query: 198  RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                   A  +  E+  +     KPDV TYNS+I G    G V +   L  +MK   I P
Sbjct: 949  MNGKLAEAEDMLLEISRKG---LKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP 1005

Query: 258  NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
             + TY+ LI   C  +  +  K +F EM    +QPD++ +N +++     G MDK   L 
Sbjct: 1006 TLKTYHLLIS-LCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQ 1061

Query: 318  ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
            + MI++ +  D  TYNSL+ G   VG++   R L   M ++    +  +Y+I++  +C+ 
Sbjct: 1062 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEM 1121

Query: 378  QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM---QLNDVVPDS 434
            +    A   YREM  + +   V   + L+SGL +     +A  +I +M   +L DV+ D 
Sbjct: 1122 KDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKLGDVIVDE 1181

Query: 435  FTFAT 439
               AT
Sbjct: 1182 DLSAT 1186



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 182/395 (46%), Gaps = 7/395 (1%)

Query: 70   DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
            D M K    P   ++  L+    +    +       ++   G+ P +   N+LI    + 
Sbjct: 786  DAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRK 845

Query: 130  GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
                  F +L  +  +   PN V++  LIN LC   +++EA  + + +      PNV  +
Sbjct: 846  YEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIY 905

Query: 190  NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
            N LI+G C       A +  EEM   F    + ++VTYN++IDGL  +G + +A+++LL+
Sbjct: 906  NMLIDGCCSKGKIEDAFRFSEEM---FKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLE 962

Query: 250  MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
            +  + + P+V TYNSLI G+    + +    L+ EM  +G++P + T++ +I+   K+G 
Sbjct: 963  ISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG- 1021

Query: 310  MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
               +    ++  +  + PD + YN ++  + + G + +A  L   M+ K    D  +YN 
Sbjct: 1022 ---IELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNS 1078

Query: 370  LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
            LI    K  K+ +   L  EM +  + P   TY+ ++ G  ++ +   A     +MQ   
Sbjct: 1079 LILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKG 1138

Query: 430  VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            ++ D       + GL +     EA  V   +   K
Sbjct: 1139 LLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRK 1173



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 138/273 (50%)

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           EA  LF  + + G+ P   +   ++++  K  +      +   +++    P    Y   +
Sbjct: 500 EAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 559

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
                +  + +  ELF  M        V+ YN+LI+  CK ++++DA  L+ EML+ R+ 
Sbjct: 560 QAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLL 619

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           PS+ITYNTL+ G  + GN   + K+ ++M+ +++ P   TF T + GL K G V +A  V
Sbjct: 620 PSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENV 679

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              +++        T++ L +G     +   A  ++      G   +  TCS +++ LCK
Sbjct: 680 LTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCK 739

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           EGQ++KA ++L    AK  VP+EV + T++ G+
Sbjct: 740 EGQIEKAEEILGREMAKGLVPNEVLYNTMIDGY 772



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 109/210 (51%)

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           IS A +LF ++ ++G      S  +L++   K ++    + ++  +L    RPS   Y  
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            +    ++ ++G  L+L ++M+ + + P  F +   IDGLCK   + +A Q+F  +   +
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + TYN LI+G CK G  + + K+  R++     P ++T +T++  L K G ++ A 
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           ++L +M+ +  VP   TF  L  G+  N+K
Sbjct: 678 NVLTEMKDQGFVPDAFTFSILFDGYSSNDK 707



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 114/235 (48%), Gaps = 3/235 (1%)

Query: 346 SRARELF--VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           +  +ELF   S+ S   +HD +SY +L     + + + +A  L+  + +E I PS  +  
Sbjct: 463 TSPKELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLT 521

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            LL  L +       + +   +  +D  P  F +   I    K   V + +++F  +++ 
Sbjct: 522 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 581

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           +    +  YN LI+GLCK+ ++K A +LF  +  +  +P ++T +T+I   CK+G  +K+
Sbjct: 582 RISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKS 641

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
             +   M+A N  PS +TF TLL+G  +         +L +M  +  V    + S
Sbjct: 642 FKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFS 696


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 245/503 (48%), Gaps = 3/503 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  MI   P P   +F  ++    +  +     SL   +      PD+   N+LIN  C 
Sbjct: 235 FKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCI 294

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G T  A   L  ++RS   P+  TF  +++ LC EG ++EA +LF  +      PN   
Sbjct: 295 GGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAI 354

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +NTL++G  + R    A  L+EEM         PD VT+N ++ G  K G ++ +  LL 
Sbjct: 355 YNTLMDGYFKAREVAQASLLYEEMRT---TGVSPDCVTFNILVWGHYKYGRIEDSDRLLK 411

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            +    +  +   Y+ ++   C      EA  L  E+++ G+   VV FN++I    + G
Sbjct: 412 DLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAG 471

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
             DK      +M++ G  P + T NSL+ G C  G +  AR L   M+ KG   +  +Y 
Sbjct: 472 LEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYT 531

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           +L++   K   +E A  L++EM    I P  + +  L+ GL + GN+ +A ++  +M   
Sbjct: 532 VLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAI 591

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
             VP++F + + I GLC  G V EA+++ + +R         T+N +I+G C+ G++K A
Sbjct: 592 GFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFA 651

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            + F  +Q  G +PD+ T + +I   CK   M  A +++  M +    P   T+ T + G
Sbjct: 652 IETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHG 711

Query: 549 FVQNNKKSKVVVLLHKMAAEKLV 571
           + +  K ++ V++L ++ +  +V
Sbjct: 712 YCRMRKMNQAVIILDQLISAGIV 734



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 242/483 (50%), Gaps = 13/483 (2%)

Query: 46  SIAKFLNDRH---KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           S+A F    H   + GN+   EA   FD +  M  +P    +  L+    K ++      
Sbjct: 316 SVATFTTILHALCREGNVV--EARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASL 373

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L++ + + G+ PD    N+L+    K G    +  +L  ++ S    ++  ++ +++ LC
Sbjct: 374 LYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLC 433

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC-- 220
             GR+ EA +L ++L       +VV FN+LI    R      A + +  MV      C  
Sbjct: 434 WAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVR-----CGF 488

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            P   T NS++ GLC+ G++ +A+ LL +M ++    N + Y  L+ G+  +++ + A+ 
Sbjct: 489 TPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQF 548

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L+ EM + G+ PD V F A+I+   K G +++   +   M   G  P+   YNSL+ G C
Sbjct: 549 LWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLC 608

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GR++ A +L   M  KG   D +++NI+I+  C+  +++ A+  + +M    + P + 
Sbjct: 609 DCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIF 668

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T+N L+ G  +  ++  A ++++KM    + PD  T+ TY+ G C+   + +AV +   +
Sbjct: 669 TFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQL 728

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            +        TYN +++G+C    L  A  L  +L   G IP+V+T + ++   CK+G  
Sbjct: 729 ISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMP 787

Query: 521 DKA 523
           +KA
Sbjct: 788 EKA 790



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 220/506 (43%), Gaps = 75/506 (14%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSC-FTPNTVTFNFLINGLCAEGRIMEAARL 173
           D  VLN L+     +G+   A  VL R++R     P   +   L+  L   G      +L
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVL-RMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKL 234

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN----- 228
           FK +      P+ +TFN +I G CR    +V   L   M      +C PDVVT+N     
Sbjct: 235 FKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPK---FMCSPDVVTFNILINA 291

Query: 229 ------------------------------SIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                                         +I+  LC++G V +A++L   ++D  I PN
Sbjct: 292 CCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPN 351

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              YN+L+ G+    +  +A  L+ EM   GV PD VTFN ++  + K G+++  +RLL+
Sbjct: 352 AAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLK 411

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN---- 374
            +I  G+  D+  Y+ ++   C  GR+  A +L   ++ KG    V ++N LI A     
Sbjct: 412 DLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAG 471

Query: 375 -------------------------------CKDQKVEDAVCLYREMLSERIRPSVITYN 403
                                          C+   +++A  L   ML +    + + Y 
Sbjct: 472 LEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYT 531

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            LL G F++ NL  A  L  +M+   + PD+  F   IDGL K G V EA +VF  +   
Sbjct: 532 VLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAI 591

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                   YN LI GLC  GR+  A KL   ++ KG + D  T + +I   C+ GQM  A
Sbjct: 592 GFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFA 651

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +  LDM+    +P   TF  L+ G+
Sbjct: 652 IETFLDMQRIGLLPDIFTFNILIGGY 677



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 189/399 (47%), Gaps = 4/399 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + ++++ L    + D  + L + L   GL   +   N LI    + G+   AF     ++
Sbjct: 425 YDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMV 484

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R  FTP++ T N L+ GLC +G + EA  L  ++       N V +  L++G  +  N  
Sbjct: 485 RCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLE 544

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  L++EM  E G    PD V + ++IDGL K G V++A E+ L+M      PN   YN
Sbjct: 545 GAQFLWKEM-KERG--IYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYN 601

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           SLI G C      EA  L  EM   G+  D  TFN +I+  C+ G+M         M + 
Sbjct: 602 SLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRI 661

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD  T+N L+ G+C    +  A E+   M S G   D+ +YN  ++  C+ +K+  A
Sbjct: 662 GLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQA 721

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           V +  +++S  I P  +TYNT+LSG+     L  A+ L  K+     +P+  T    +  
Sbjct: 722 VIILDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSH 780

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            CK G   +A+   Q +R         +Y  L    C M
Sbjct: 781 FCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYCLM 819



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 187/409 (45%), Gaps = 4/409 (0%)

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           NTL+ G         AL++   M    G   +P + +   ++  L + G      +L   
Sbjct: 181 NTLLRGFLNVGMGFEALEVLRMMR---GVGVRPGLSSITILLRLLLRIGDYGSVWKLFKD 237

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  +   P+ +T+N++ICGFC        + L   M      PDVVTFN +IN  C  G+
Sbjct: 238 MIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGR 297

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
                  L LM++ GV P   T+ +++   C  G +  AR+LF  +   G   +   YN 
Sbjct: 298 TWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNT 357

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L++   K ++V  A  LY EM +  + P  +T+N L+ G ++ G + D+ +L+  + ++ 
Sbjct: 358 LMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSG 417

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           +  DS  +   +  LC  G + EA+++ Q +      L +  +N LI    + G    A 
Sbjct: 418 LFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAF 477

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           + +  +   G  P   TC++++  LC++G + +A  LL  M  K    ++V +  LL G+
Sbjct: 478 EAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGY 537

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            + N       L  +M  E+ +  D    + ++D LSK     E    F
Sbjct: 538 FKMNNLEGAQFLWKEM-KERGIYPDAVAFTALIDGLSKAGNVEEAYEVF 585



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 223/481 (46%), Gaps = 43/481 (8%)

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N L+ G    G   EA  + + +      P + +   L+  L R  +     KLF++M+ 
Sbjct: 181 NTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIF 240

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
           + G   +P  +T+N++I G C+   V   + LL  M     +P+V+T+N LI   CC+  
Sbjct: 241 K-GP--RPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINA-CCIGG 296

Query: 275 --WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
             W     L + M+ +GV+P V TF  +++  C++G + +  +L + +   G+ P+   Y
Sbjct: 297 RTWVAIDWLHL-MVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIY 355

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N+LMDG+     +++A  L+  M + G   D  ++NIL+  + K  ++ED+  L ++++ 
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIV 415

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             +      Y+ ++S L   G L +A+KL+ ++    +      F + I    + G   +
Sbjct: 416 SGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDK 475

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG-PI---------- 501
           A + ++ +  C       T N L+ GLC+ G L+ A  L +R+  KG PI          
Sbjct: 476 AFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLD 535

Query: 502 ------------------------PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
                                   PD V  + +I  L K G +++A ++ L+M A   VP
Sbjct: 536 GYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVP 595

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
           +   + +L+RG     + ++ + L  +M  +K ++SD    + ++D   +  + +  +  
Sbjct: 596 NNFAYNSLIRGLCDCGRVTEALKLEKEM-RQKGLLSDTFTFNIIIDGFCRRGQMKFAIET 654

Query: 598 F 598
           F
Sbjct: 655 F 655



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 164/344 (47%), Gaps = 4/344 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
            ++A   +  M++   +P  ++   LL  L +         L  R+   G   +     +
Sbjct: 473 EDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTV 532

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++   KM    GA  +   +      P+ V F  LI+GL   G + EA  +F +++   
Sbjct: 533 LLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIG 592

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN   +N+LI GLC       ALKL +EM  + G +   D  T+N IIDG C+ G + 
Sbjct: 593 FVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQK-GLLS--DTFTFNIIIDGFCRRGQMK 649

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A E  L M+   + P++ T+N LI G+C   D   A  +  +M   G+ PD+ T+N  +
Sbjct: 650 FAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYM 709

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C+  KM++   +L+ +I  G+ PDTVTYN+++ G C    + RA  L   ++  G  
Sbjct: 710 HGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFI 768

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
            +V + N+L++  CK    E A+   +++         I+Y  L
Sbjct: 769 PNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRIL 812



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 33/265 (12%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           + D  +    ++   K+GN+   EA   F  M  +   P   ++  L+  L    +    
Sbjct: 559 YPDAVAFTALIDGLSKAGNV--EEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEA 616

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           + L K +   GL  D F  N++I+  C+ G    A      + R    P+  TFN LI G
Sbjct: 617 LKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGG 676

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE----- 215
            C    ++ A  +  K+     DP++ T+NT ++G CR R    A+ + +++++      
Sbjct: 677 YCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPD 736

Query: 216 -------FGAICK-------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                     IC                    P+V+T N ++   CK G  +KA     +
Sbjct: 737 TVTYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQK 796

Query: 250 MKDRNINPNVITYNSLICGFCCVDD 274
           +++ +   + I+Y  L   +C + D
Sbjct: 797 LREISFGFDEISYRILDQAYCLMQD 821


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 264/511 (51%), Gaps = 7/511 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K+G ++  +A+  FD M +   +P +  + IL+    K         
Sbjct: 183 DVFSYGTLINSLAKNGYMS--DALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE 240

Query: 103 LFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           +++RL     ++P++   N++IN LCK G    +F +  R+ ++    +  T++ LI+GL
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  G +  A R++K++      P+VV +NT++NG  R       L+L++ M  E    C+
Sbjct: 301 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG---CR 357

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
             VV+YN +I GL ++  VD+A  +   + +++   + +TY  L+ G C      +A  +
Sbjct: 358 -TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSI 416

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             E  +     D   +++MIN  C++G++D+V  +L+ M + G  P+    N++++GF  
Sbjct: 417 LEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVR 476

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             ++  A   F +MVSKGC   V +YN LIN   K ++  +A  L +EML +  +P++IT
Sbjct: 477 ASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMIT 536

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+ L++GL Q   L  AL L  +       PD       I GLC +G V +A+Q++  ++
Sbjct: 537 YSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMK 596

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
             KC   + T+N L+ G  K+   + A K++  +   GP PD+++ +  +  LC   ++ 
Sbjct: 597 QRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRIS 656

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            A   L D   +  +P+ +T+  L+R  + N
Sbjct: 657 DAVGFLNDAVDRGVLPTAITWNILVRAVLDN 687



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 252/491 (51%), Gaps = 7/491 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA  FF     M  SP + ++ IL+ +  + KQ+D    L   +   G  PD+F    L
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFA 181
           IN L K G  S A  +   +     TP+   +N LI+G   +G I+ A+ ++++L    +
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFV 240
             PN+ ++N +INGLC+      + +++  M  NE G     D+ TY+++I GLC  G +
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ----DLYTYSTLIHGLCGSGNL 306

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D A  +  +M +  ++P+V+ YN+++ G+      +E   L+  M   G +  VV++N +
Sbjct: 307 DGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNIL 365

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I    ++ K+D+   + EL+ ++    D++TY  L+ G C  G +++A  +     +   
Sbjct: 366 IRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG 425

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D ++Y+ +IN  C++ ++++   +  +M     +P+    N +++G  +   L DAL+
Sbjct: 426 DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALR 485

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
               M      P   T+ T I+GL K     EA  + + + +   +  + TY+ L+NGLC
Sbjct: 486 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC 545

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           +  +L  A  L+ +   KG  PDV   + +IH LC  G+++ A  L  +M+ + CVP+ V
Sbjct: 546 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLV 605

Query: 541 TFCTLLRGFVQ 551
           T  TL+ GF +
Sbjct: 606 THNTLMEGFYK 616



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 256/517 (49%), Gaps = 7/517 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           ++   AKN   D  + +F+R++   G  P +   N L+N L +      A          
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
             +PN  T+N LI   C + +  +A  L   +      P+V ++ TLIN L +      A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNS 264
           LKLF+EM  E G    PDV  YN +IDG  K G +  A E+  ++ K  ++ PN+ +YN 
Sbjct: 204 LKLFDEMP-ERGVT--PDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 260

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           +I G C    + E+  ++  M  N    D+ T++ +I+  C  G +D   R+ + M + G
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           V+PD V YN++++G+   GRI    EL+  M  +GCR  V SYNILI    ++ KV++A+
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAI 379

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            ++  +  +      +TY  L+ GL + G L  AL ++++ +      D+F +++ I+GL
Sbjct: 380 SIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 439

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C+ G + E   V   +    C+      N +ING  +  +L+ A + F  +  KG  P V
Sbjct: 440 CREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTV 499

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           VT +T+I+ L K  +  +A  L+ +M  K   P+ +T+  L+ G  Q  KK  + + L  
Sbjct: 500 VTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ-GKKLDMALNLWC 558

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            A EK    D+ + + ++  L    K  + L  +  +
Sbjct: 559 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 221/442 (50%), Gaps = 4/442 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+ +++  L K  ++D    ++ R+  N    DL+  + LI+ LC  G   GA  V
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +  +  +P+ V +N ++NG    GRI E   L+K +    C   VV++N LI GL  
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFE 371

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+ ++E +  +    C  D +TY  ++ GLCK+G+++KA  +L + ++   + +
Sbjct: 372 NAKVDEAISIWELLPEK---DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 428

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              Y+S+I G C      E   +  +M  +G +P+    NA+IN   +  K++   R   
Sbjct: 429 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFG 488

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+ +G  P  VTYN+L++G     R S A  L   M+ KG + ++ +Y++L+N  C+ +
Sbjct: 489 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGK 548

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K++ A+ L+ + L +  +P V  +N ++ GL   G + DAL+L  +M+    VP+  T  
Sbjct: 549 KLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHN 608

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T ++G  K      A +++  I     +  I +YN  + GLC   R+  A    +    +
Sbjct: 609 TLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDR 668

Query: 499 GPIPDVVTCSTMIHWLCKEGQM 520
           G +P  +T + ++  +   G +
Sbjct: 669 GVLPTAITWNILVRAVLDNGAL 690


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 213/379 (56%), Gaps = 5/379 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN+  ++A+  F+ M+   P P +  F  LL+ + + K+Y+TVVSLFK +   G+  ++ 
Sbjct: 19  GNL--DDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVC 76

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
            L++LINC C +      F V G+ L+  F P+ V F  LI+G+C  G+   AA L K++
Sbjct: 77  TLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM 136

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
            +  C P+VVT N+L+ G C         K+F  MV++     KPDV +Y+  I+G CK 
Sbjct: 137 GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKG---LKPDVYSYSIFINGYCKV 193

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             +D+A EL  +M  R + PN +TYN+LI   C     ++A+ LF +M   G+ PD++ +
Sbjct: 194 EKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAY 253

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           + +++  CK G +D++  L + M +R V PD V Y  +++G C   ++  A+E+   ++ 
Sbjct: 254 STLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIV 313

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +G + DV++Y  L++  C++  + +A+ L+R+M  +   P   +YN LL G  Q  +   
Sbjct: 314 EGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTST 373

Query: 418 ALKLIDKMQLNDVVPDSFT 436
            ++LI +M       D+ T
Sbjct: 374 VVQLIHEMADRGFYADAVT 392



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 194/346 (56%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           +P ++ +N ++  + +    +    L  +M+ R I  NV T + LI  FC +        
Sbjct: 37  QPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFS 96

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +F + +  G +PDVV F  +I+  C+ GK +    LL+ M   G  PD VT NSLM G+C
Sbjct: 97  VFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYC 156

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G+I + R++F  MVSKG + DVYSY+I IN  CK +K+++A+ L+ EM    + P+ +
Sbjct: 157 SQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAV 216

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYNTL+  L Q     DA  L  KM    + PD   ++T +DG CK G + E + +FQ +
Sbjct: 217 TYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEM 276

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           +    +  +  Y  +ING+C+  ++K A ++  RL  +G  PDV T + ++  LC+EG +
Sbjct: 277 QRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSI 336

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            +A  L   ME   C+P   ++  LL+G +Q+N  S VV L+H+MA
Sbjct: 337 IEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMA 382



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 195/380 (51%), Gaps = 3/380 (0%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A     R+L     P  + FN L++ +    +      LFK++       NV T + LIN
Sbjct: 24  ALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILIN 83

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             C   +      +F + +       KPDVV + ++IDG+C+ G  + A  LL +M    
Sbjct: 84  CFCFLHHVDYGFSVFGKTLKRG---FKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG 140

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             P+V+T NSL+ G+C      + + +F  M+  G++PDV +++  IN  CK  K+D+  
Sbjct: 141 CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAM 200

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L + M  RGV P+ VTYN+L+   C   R   A+ LF  M + G   D+ +Y+ L++  
Sbjct: 201 ELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGF 260

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK   +++ + L++EM    ++P ++ Y  +++G+ +   + DA +++ ++ +  + PD 
Sbjct: 261 CKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDV 320

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   +DGLC+ G ++EA+++F+ +    C     +YN L+ G  +     T  +L H 
Sbjct: 321 HTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHE 380

Query: 495 LQHKGPIPDVVTCSTMIHWL 514
           +  +G   D VT + +  +L
Sbjct: 381 MADRGFYADAVTRTFLKDFL 400



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 157/325 (48%), Gaps = 1/325 (0%)

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A   F  M+D   QP ++ FN +++   +  K + V  L + M  RG+  +  T + L+
Sbjct: 23  DALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILI 82

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           + FC +  +     +F   + +G + DV  +  LI+  C+  K E A  L +EM      
Sbjct: 83  NCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCV 142

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P V+T N+L+ G    G +    K+   M    + PD ++++ +I+G CK   + EA+++
Sbjct: 143 PDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMEL 202

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F  + +        TYN LI  LC+  R + A  LF ++   G  PD++  ST++   CK
Sbjct: 203 FDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCK 262

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +G +D+   L  +M+ +   P  V +  ++ G  ++ K      +L ++  E L   D+ 
Sbjct: 263 QGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGL-KPDVH 321

Query: 577 LSSKVVDLLSKDKKYRECLNQFRHL 601
             + +VD L ++    E L  FR +
Sbjct: 322 TYTALVDGLCREGSIIEALRLFRKM 346



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 127/259 (49%), Gaps = 3/259 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +   L+       + D V  +F  + S GL PD++  ++ IN  CK+     A  +
Sbjct: 143 PDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMEL 202

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +      PN VT+N LI  LC   R  +A  LF+K+      P+++ ++TL++G C+
Sbjct: 203 FDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCK 262

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             N    L LF+EM      + KPD+V Y  II+G+C+   V  AKE+L ++    + P+
Sbjct: 263 QGNLDEMLVLFQEMQRR---LVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPD 319

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V TY +L+ G C      EA  LF +M ++G  P   ++N ++    +      V +L+ 
Sbjct: 320 VHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIH 379

Query: 319 LMIQRGVNPDTVTYNSLMD 337
            M  RG   D VT   L D
Sbjct: 380 EMADRGFYADAVTRTFLKD 398



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 141/286 (49%), Gaps = 1/286 (0%)

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D        M+ R   P  + +N L+     + +      LF  M  +G +++V + 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           +ILIN  C    V+    ++ + L    +P V+ + TL+ G+ ++G    A  L+ +M L
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
              VPD  T  + + G C  G + +  ++F  + +   +  + +Y+  ING CK+ ++  
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A +LF  + H+G +P+ VT +T+I  LC+  +   A  L   M A    P  + + TLL 
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLD 258

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           GF +     +++VL  +M   +LV  DL + + +++ + + +K ++
Sbjct: 259 GFCKQGNLDEMLVLFQEM-QRRLVKPDLVVYTIIINGMCRSRKVKD 303


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 252/491 (51%), Gaps = 7/491 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA  FF     M  SP + ++ IL+ +  + KQ+D    L   +   G  PD+F    L
Sbjct: 106 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTL 165

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK-LNVFA 181
           IN L K G  S A  +   +     TP+   +N LI+G   +G I+ A+ ++++ L   +
Sbjct: 166 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 225

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFV 240
             PN+ ++N +INGLC+      + +++  M  NE G     D+ TY+++I GLC  G +
Sbjct: 226 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ----DLYTYSTLIHGLCGSGNL 281

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D A  +  +M +  ++P+V+ YN+++ G+      +E   L+  M   G +  VV++N +
Sbjct: 282 DGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNIL 340

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I    ++ K+D+   + EL+ ++    D++TY  L+ G C  G +++A  +     +   
Sbjct: 341 IRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG 400

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D ++Y+ +IN  C++ ++++   +  +M     +P+    N +++G  +   L DAL+
Sbjct: 401 DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALR 460

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
               M      P   T+ T I+GL K     EA  + + +     +  + TY+ L+NGLC
Sbjct: 461 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLC 520

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           +  +L  A  L+ +   KG  PDV   + +IH LC  G+++ A  L  +M+ +NCVP+ V
Sbjct: 521 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLV 580

Query: 541 TFCTLLRGFVQ 551
           T  TL+ GF +
Sbjct: 581 THNTLMEGFYK 591



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 263/509 (51%), Gaps = 7/509 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K+G ++  +A+  FD M +   +P +  + IL+    K         
Sbjct: 158 DVFSYGTLINSLAKNGYMS--DALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE 215

Query: 103 LFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           +++RL     ++P++   N++IN LCK G    +F +  R+ ++    +  T++ LI+GL
Sbjct: 216 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 275

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  G +  A R++K++      P+VV +NT++NG  R       L+L++ M  E    C+
Sbjct: 276 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG---CR 332

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
             VV+YN +I GL ++  VD+A  +   + +++   + +TY  L+ G C      +A  +
Sbjct: 333 -TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSI 391

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             E  +     D   +++MIN  C++G++D+V  +L+ M + G  P+    N++++GF  
Sbjct: 392 LEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVR 451

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             ++  A   F +MVSKGC   V +YN LIN   K ++  +A  L +EML +  +P++IT
Sbjct: 452 ASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMIT 511

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+ L++GL Q   L  AL L  +       PD       I GLC +G V +A+Q++  ++
Sbjct: 512 YSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMK 571

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
              C   + T+N L+ G  K+   + A K++  +   G  PD+++ +  +  LC   ++ 
Sbjct: 572 QRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRIS 631

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
            A   L D   +  +P+ +T+  L++G++
Sbjct: 632 DAVGFLNDAVDRGVLPTAITWNILVQGYL 660



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 243/505 (48%), Gaps = 19/505 (3%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS-----------NGLFPDLFVLNLLI 123
           M  +P   S   ++ +L   K   + +S+F  +             + +   LF   L+ 
Sbjct: 1   MASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVA 60

Query: 124 NCLCKMGITSGAFVVLGRI--LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +   K  +   A  +  R+  +  C  P   ++N L+N L    +  EA   F       
Sbjct: 61  HAYAKNSMPDQALDIFQRMHEIFGC-QPGIRSYNSLLNALIESNKWDEAESFFLYFETMG 119

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN+ T+N LI   CR +    A +L   M   +G    PDV +Y ++I+ L K+G++ 
Sbjct: 120 LSPNLQTYNILIKISCRKKQFDKAKELLNWM---WGQGFSPDVFSYGTLINSLAKNGYMS 176

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAM 300
            A +L  +M +R + P+V  YN LI GF    D   A  ++  ++    V P++ ++N M
Sbjct: 177 DALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVM 236

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           IN  CK GK D+   +   M +     D  TY++L+ G C  G +  A  ++  M   G 
Sbjct: 237 INGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 296

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             DV  YN ++N   +  ++E+ + L++ M  E  R +V++YN L+ GLF+   + +A+ 
Sbjct: 297 SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAIS 355

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           + + +   D   DS T+   + GLCKNG++ +A+ + +   N + +L    Y+ +INGLC
Sbjct: 356 IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC 415

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + GRL     +  ++   G  P+   C+ +I+   +  +++ A     +M +K C P+ V
Sbjct: 416 REGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 475

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
           T+ TL+ G  +  + S+   L+ +M
Sbjct: 476 TYNTLINGLSKAERFSEAYALVKEM 500



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 225/444 (50%), Gaps = 5/444 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+ +++  L K  ++D    ++ R+  N    DL+  + LI+ LC  G   GA  V
Sbjct: 228 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 287

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +  +  +P+ V +N ++NG    GRI E   L+K +    C   VV++N LI GL  
Sbjct: 288 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFE 346

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+ ++E +  +    C  D +TY  ++ GLCK+G+++KA  +L + ++   + +
Sbjct: 347 NAKVDEAISIWELLPEK---DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 403

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              Y+S+I G C      E   +  +M  +G +P+    NA+IN   +  K++   R   
Sbjct: 404 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFG 463

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+ +G  P  VTYN+L++G     R S A  L   M+ KG + ++ +Y++L+N  C+ +
Sbjct: 464 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGK 523

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K++ A+ L+ + L +  +P V  +N ++ GL   G + DAL+L  +M+  + VP+  T  
Sbjct: 524 KLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHN 583

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T ++G  K      A +++  I     +  I +YN  + GLC   R+  A    +    +
Sbjct: 584 TLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDR 643

Query: 499 GPIPDVVTCSTMIH-WLCKEGQMD 521
           G +P  +T + ++  +L  +G M+
Sbjct: 644 GVLPTAITWNILVQGYLALKGYME 667


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 257/517 (49%), Gaps = 24/517 (4%)

Query: 70  DCMIKMK-----PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           +C +KM+     P P   S   LL  L+K  + D     FK + + G+   +F  N++I+
Sbjct: 7   ECFLKMRKFRVFPKP--RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMID 64

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK G    A  +  ++  + FTP+ VT+N LI+G    G + E   +F+++    CDP
Sbjct: 65  YLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDP 124

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V+T+N LIN  C+      A +   EM        KP+VVTY++ ID  CK+G + +A 
Sbjct: 125 DVITYNALINCFCKFERMPKAFEFLHEMK---ANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +  + M+   + PN  TY SLI   C   +  EA  L  E++  G++ +VVT+ A+++  
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C++G+M +   +   M+  GV P+  TY +L+ GF     +  A+++   M  K  + D+
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y  ++   C + ++E+A  L  E+    I  + + Y TL+   F+ G   +AL L+++
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M               +DGLCKN     A ++F  + +         Y  LI+G  K G 
Sbjct: 362 M------------LDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 409

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           L+ A  L  R+   G   D+   + +I  L   GQ+ KA +LL +M  K  +P EV +  
Sbjct: 410 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 469

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLV--VSDLSLSS 579
           L++ +    K  + + L ++MA   ++  +SD ++ S
Sbjct: 470 LIKKYYALGKVDEALELQNEMAKRGMITGLSDHAVPS 506



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 185/362 (51%), Gaps = 3/362 (0%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           EA+  F K+  F   P   + N L++ L +     ++ K F++M     A  K  V TYN
Sbjct: 4   EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMG---AAGIKRSVFTYN 60

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +ID LCK+G ++ A+ L  QMK+    P+++TYNSLI G   +    E  C+F +M D 
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
              PDV+T+NA+IN  CK  +M K    L  M   G+ P+ VTY++ +D FC  G +  A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            + FV M       + ++Y  LI+ANCK   + +A+ L  E+L   I+ +V+TY  LL G
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G + +A ++   M    V P+  T+   + G  K   +  A  + + ++    +  
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           +  Y  ++ GLC   RL+ A  L   ++  G   + V  +T++    K GQ  +A  LL 
Sbjct: 301 LLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLE 360

Query: 529 DM 530
           +M
Sbjct: 361 EM 362



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 190/363 (52%), Gaps = 1/363 (0%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +++A E  L+M+   + P   + N+L+     V     ++  F +M   G++  V T+N 
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           MI+Y CK+G ++    L   M + G  PD VTYNSL+DG   +G +     +F  M    
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  DV +YN LIN  CK +++  A     EM +  ++P+V+TY+T +    + G L +A+
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           K    M+   + P+ FT+ + ID  CK G + EA+++ + I     +L + TY  L++GL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C+ GR+K A ++F  + + G  P+  T + ++H   K  +M+ A D+L +M+ K   P  
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
           + + T+L G    ++  +  +L+ ++  E  + ++  + + ++D   K  +  E L    
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEI-KESGINTNAVIYTTLMDAYFKSGQATEALTLLE 360

Query: 600 HLL 602
            +L
Sbjct: 361 EML 363



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 186/394 (47%), Gaps = 15/394 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E +  F+ M      P + ++  L+    K ++          + +NGL P++   +  
Sbjct: 108 DECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTF 167

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK G+   A      + R   TPN  T+  LI+  C  G + EA +L +++     
Sbjct: 168 IDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGI 227

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             NVVT+  L++GLC       A ++F  M+N   A   P+  TY +++ G  K   ++ 
Sbjct: 228 KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN---AGVAPNQETYTALVHGFIKAKEMEY 284

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK++L +MK++ I P+++ Y +++ G C     +EAK L  E+ ++G+  + V +  +++
Sbjct: 285 AKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMD 344

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G+  +   LLE M+             L+DG C       A++LF  M+ KG   
Sbjct: 345 AYFKSGQATEALTLLEEML------------DLVDGLCKNNCFEVAKKLFDEMLDKGMMP 392

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +Y  LI+ N K   +++A+ L   M+   +   +  Y  L+ GL   G +  A  L+
Sbjct: 393 DKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLL 452

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           D+M    V+PD   +   I      G V EA+++
Sbjct: 453 DEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 486


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/386 (33%), Positives = 218/386 (56%), Gaps = 4/386 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VV+++T+ING C        LKL +EM  +     KP++ TYNSII  LCK G VD A
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKG---LKPNLYTYNSIILLLCKSGKVDDA 64

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           + +L +M ++ I P+ + Y +LI GFC + + + A  LF EM    + PD + + A+I  
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ GKM + +++   M  RGV PD VTY +L+DG+C  G + +A  L   MV  G   +
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +Y  L +  CK  +V+ A  L  EM  + ++ ++ TYN+L++GL + GN+  A+KL++
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M++  + PD+ TF T +D  CK G +++A ++ + + +   +  + T+N L+NG C  G
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            L+   +L   +  KG +P+  T ++++   C    M    ++   M A+  +P   T+ 
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEK 569
            L++G  +  +  K    LHK  AEK
Sbjct: 365 ILIKGHCK-ARNMKEAWFLHKEMAEK 389



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/458 (31%), Positives = 231/458 (50%), Gaps = 4/458 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + S++ ++       +   V+ L + +   GL P+L+  N +I  LCK G    A  
Sbjct: 7   APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VL  ++     P+TV +  LI+G C  G I  A +LF ++      P+ + +  +I GLC
Sbjct: 67  VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R    + A K+F +M   F    +PD VTY ++IDG CK G ++KA  L  QM    + P
Sbjct: 127 RCGKMMEADKVFNKM---FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV+TY +L  G C +     A  L  EM   G+Q ++ T+N+++N  CK G + +  +L+
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E M   G+ PDT+T+ +LMD +C  G + +A EL   M+ +G +  V ++N+L+N  C  
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             +ED   L   ML + I P+  TYN+L+       N+    ++   M    V+PDS T+
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTY 363

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I G CK   + EA  + + +      L   +YN +I G  K  ++  A +LF  ++ 
Sbjct: 364 NILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRR 423

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           +G   D    +  +     EG M+ A + L D   +NC
Sbjct: 424 EGMAADAEIYNLFVDISYGEGNMETALE-LCDEAIENC 460



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 228/437 (52%), Gaps = 4/437 (0%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+ V+++ +ING C  G + +  +L +++ +    PN+ T+N++I  LC++     A +
Sbjct: 7   APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +  EM+N+ G +  PD V Y ++IDG CK G +  A +L  +M+ + I P+ I Y ++IC
Sbjct: 67  VLREMINQ-GIV--PDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C      EA  +F +M   GV+PD VT+  +I+  CK G+M+K   L   M+Q G+ P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + VTY +L DG C +G++  A EL   M  KG + ++ +YN L+N  CK   +  AV L 
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            EM    + P  IT+ TL+    + G +  A +L+ +M    + P   TF   ++G C +
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + +  ++   +          TYN L+   C    ++   +++  +  +G +PD  T 
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTY 363

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + +I   CK   M +A  L  +M  K    +  ++ ++++GF +  K S+   L  +M  
Sbjct: 364 NILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRR 423

Query: 568 EKLVVSDLSLSSKVVDL 584
           E +  +D  + +  VD+
Sbjct: 424 EGM-AADAEIYNLFVDI 439



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 211/409 (51%), Gaps = 6/409 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +   E V     MI     P    +T L+    K         LF  +    + PD
Sbjct: 57  KSGKVDDAERV--LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPD 114

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 +I  LC+ G    A  V  ++      P+ VT+  LI+G C  G + +A  L  
Sbjct: 115 FIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHN 174

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PNVVT+  L +GLC+      A +L  EM    G   + ++ TYNS+++GLC
Sbjct: 175 QMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMC---GKGLQLNICTYNSLVNGLC 231

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G + +A +L+ +M+   + P+ IT+ +L+  +C   +  +A  L  EM+D G+QP V+
Sbjct: 232 KSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVI 291

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           TFN ++N  C  G ++   RLL  M+++G+ P+T TYNSLM  +C+   +    E++  M
Sbjct: 292 TFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGM 351

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            ++G   D  +YNILI  +CK + +++A  L++EM  +    +  +YN+++ G F+   +
Sbjct: 352 CARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKI 411

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNC 463
            +A +L ++M+   +  D+  +  ++D     G +  A+++  +AI NC
Sbjct: 412 SEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIENC 460



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 106/300 (35%), Positives = 172/300 (57%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           MK R   P+V++Y+++I G+C   + ++   L  EM   G++P++ T+N++I   CK GK
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D   R+L  MI +G+ PDTV Y +L+DGFC +G I  A +LF  M  +    D  +Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           +I   C+  K+ +A  ++ +M S  + P  +TY TL+ G  + G +  A  L ++M  + 
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P+  T+    DGLCK G V  A ++   +     +L I TYN L+NGLCK G ++ A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           KL   ++  G  PD +T +T++   CK G+M KA++LL +M  +   P+ +TF  L+ GF
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 152/277 (54%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G  PDVV+++ +IN  C  G++ KV +L++ M  +G+ P+  TYNS++   C  G++  A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
             +   M+++G   D   Y  LI+  CK   ++ A  L+ EM  +RI P  I Y  ++ G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G + +A K+ +KM    V PD  T+ T IDG CK+G + +A  +   +        
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + TY  L +GLCK+G++ TA +L H +  KG   ++ T +++++ LCK G + +A  L+ 
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +ME     P  +TF TL+  + +  +  K   LL +M
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 129/244 (52%), Gaps = 1/244 (0%)

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +G   DV SY+ +IN  C   +++  + L +EM  + ++P++ TYN+++  L + G + D
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A +++ +M    +VPD+  + T IDG CK G +  A ++F  +   +       Y  +I 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           GLC+ G++  A K+F+++  +G  PD VT +T+I   CK G+M+KA  L   M      P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
           + VT+  L  G  +  +      LLH+M  + L ++  + +S +V+ L K    R+ +  
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNS-LVNGLCKSGNIRQAVKL 242

Query: 598 FRHL 601
              +
Sbjct: 243 MEEM 246


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 252/533 (47%), Gaps = 23/533 (4%)

Query: 23  WCSFGRPPNPKTDLSSHHFKDGTSIAKF---LNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           +C  GR  + +  L +       ++  +   +N   +SG +         + +  M  +P
Sbjct: 154 YCRDGRLADAERVLEAAKVSGAANVVTYTALINGYCRSGRLAD-----ALNLIASMPVAP 208

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
              ++  +L  L   KQ++    L + +  N   P+       I   C+ G+   A  +L
Sbjct: 209 DTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLL 268

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
            R+ R   TP+ V ++ L+NG   +GR+ +A  L   LN   C PN V +N  + GLC  
Sbjct: 269 ERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVL---LNTMLCKPNTVCYNAALKGLCMA 325

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                  +L  EMV +    C P+  T++ +   LC+ G VD A E++ QM+     P+V
Sbjct: 326 ERWKDVGELIAEMVRKD---CPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDV 382

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           + YN+LI  F       +A  L   M+ N   PD ++FNA +   C+  +   V  L+  
Sbjct: 383 VIYNTLINYFSEQGRVDDALMLLDSMLCN---PDTISFNAALKALCRTERWYDVEELIAQ 439

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M++       +T+N L+D  C  G ++ A E+F  M    C  D+ +Y+ LIN   +   
Sbjct: 440 MLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGL 499

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           VE A+ L++ M     +P + +YN +L GL +     DA +LI  M   D  P+  TF  
Sbjct: 500 VESAIELFQSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNI 556

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+ LC+ GF   A++VF+ +        I TYN LING  + GRL  A  L   +  K 
Sbjct: 557 LINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCK- 615

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             PD ++ ++ +  LC+  +  +A +++ +M  K C P+EVTF    + F+ N
Sbjct: 616 --PDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTFKYANQLFIPN 666



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 157/553 (28%), Positives = 259/553 (46%), Gaps = 56/553 (10%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG    T  L  L + +  D  + L   + S+   P +   N+LI  LC     + A  V
Sbjct: 76  PGGAGQT--LRRLVQLEDLDAALRLVGSMPSSEP-PAVIACNILIKKLCAHRRLADAERV 132

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L   L+   + + V+ N L+ G C +GR+ +A R+ +   V     NVVT+  LING CR
Sbjct: 133 LD-ALKESGSADAVSHNTLVAGYCRDGRLADAERVLEAAKVSGA-ANVVTYTALINGYCR 190

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           +     AL L   M         PD  TYN+++ GLC     +KA+EL+ +M   N +PN
Sbjct: 191 SGRLADALNLIASMP------VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPN 244

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +T+ + I  FC       A  L   M   G  PDVV ++ ++N   + G++D    LL 
Sbjct: 245 EVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLN 304

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+     P+TV YN+ + G C+  R     EL   MV K C  +  ++++L +  C+  
Sbjct: 305 TML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHG 361

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS---- 434
            V+ A+ +  +M     RP V+ YNTL++   + G + DAL L+D M  N   PD+    
Sbjct: 362 LVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCN---PDTISFN 418

Query: 435 -------------------------------FTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
                                           TF   ID LC++G V  A++VF+ +   
Sbjct: 419 AALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKY 478

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           +C   I TY+ LING  + G +++A +LF  +  K   PD+ + + ++  LC+  + + A
Sbjct: 479 RCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCK---PDIFSYNAVLKGLCRAARWEDA 535

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            +L+ +M  K+C P+E+TF  L+    Q     + + +  +M  E     D+   + +++
Sbjct: 536 GELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQM-PEYGSTPDIFTYNALIN 594

Query: 584 LLSKDKKYRECLN 596
             S+  +  + LN
Sbjct: 595 GFSEQGRLDDALN 607



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 229/452 (50%), Gaps = 15/452 (3%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LIN  C+ G  + A  ++  +      P+T T+N ++ GLC   +  +A  L +++    
Sbjct: 184 LINGYCRSGRLADALNLIASMP---VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNN 240

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C PN VTF T I   C+      A++L E M   +G  C PDVV Y+++++G  + G VD
Sbjct: 241 CHPNEVTFATQIRSFCQNGLLDHAVQLLERM-PRYG--CTPDVVIYSTLVNGFSEQGRVD 297

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A  LL  M      PN + YN+ + G C  + WK+   L  EM+     P+  TF+ + 
Sbjct: 298 DALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLT 354

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C+ G +D    ++E M + G  PD V YN+L++ F   GR+  A  L  SM+   C 
Sbjct: 355 SCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CN 411

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  S+N  + A C+ ++  D   L  +ML E      +T+N L+  L Q G +  A+++
Sbjct: 412 PDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEV 471

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            ++M      PD  T+++ I+G  + G V  A+++FQ++    C+  I +YN ++ GLC+
Sbjct: 472 FEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM---PCKPDIFSYNAVLKGLCR 528

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             R + A +L   +  K   P+ +T + +I+ LC++G  D+A ++   M      P   T
Sbjct: 529 AARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFT 588

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           +  L+ GF +  +    + LL  M+ +   +S
Sbjct: 589 YNALINGFSEQGRLDDALNLLSTMSCKPDAIS 620



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 244/496 (49%), Gaps = 18/496 (3%)

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
           K+  +  + ++T L+    ++ +    ++L   + S  + PD +  N ++  LC      
Sbjct: 171 KVSGAANVVTYTALINGYCRSGRLADALNL---IASMPVAPDTYTYNTVLKGLCGAKQWE 227

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
            A  ++  ++R+   PN VTF   I   C  G +  A +L +++  + C P+VV ++TL+
Sbjct: 228 KAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLV 287

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           NG         AL L   M      +CKP+ V YN+ + GLC         EL+ +M  +
Sbjct: 288 NGFSEQGRVDDALVLLNTM------LCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRK 341

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
           +  PN  T++ L    C       A  +  +M   G +PDVV +N +INY  + G++D  
Sbjct: 342 DCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDA 401

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             LL+ M+    NPDT+++N+ +   C   R     EL   M+ + C     ++NILI++
Sbjct: 402 LMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDS 458

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C+   V  A+ ++ +M   R  P ++TY++L++G  + G +  A++L   M      PD
Sbjct: 459 LCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCK---PD 515

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            F++   + GLC+     +A ++   +    C     T+N LIN LC+ G    A ++F 
Sbjct: 516 IFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFK 575

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           ++   G  PD+ T + +I+   ++G++D A +LL  M   +C P  +++ + L+G  +  
Sbjct: 576 QMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTM---SCKPDAISYNSTLKGLCRAE 632

Query: 554 KKSKVVVLLHKMAAEK 569
           +  +   ++ +M  +K
Sbjct: 633 RWKEAEEIVAEMLRKK 648


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/479 (30%), Positives = 240/479 (50%), Gaps = 5/479 (1%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD MI+    P + +   +L +L          +++  +   G+ P +   N +++  CK
Sbjct: 168 FDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCK 227

Query: 129 MGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
            G    A  +L  +  R C+ PN VT+N L+NGL  +G + +A  L +++     + +  
Sbjct: 228 EGRVDQALELLSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+N LING C+    + A  L EEMVN       P + TYN+++ GLCK   V   +   
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAF---PTLSTYNTLMYGLCKWVQVTGVRLRF 343

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M      P+++++NSL+ G+C      EA  LF E+    + P V+T+N +I+  C  
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D   RL + M  +G+ PD  TY  L++G   +G +S AR  F  M+SKG + D ++Y
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N  I    K      A  +  EML+    P VITYN  +  L Q GN  +A  L++ M  
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + ++PD  T+ + I+G  KNG + +A +VF  + +      + TY  LI+       L  
Sbjct: 524 DGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDL 583

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           A   F ++  K    +V+T + +I+ LC   +MD+A     +ME K  +P++ ++  L+
Sbjct: 584 AFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 205/369 (55%), Gaps = 3/369 (0%)

Query: 113 FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
           FP L   N L+  LCK    +G  +    +L+S FTP+ V+FN L+ G C  G I EA  
Sbjct: 317 FPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFL 376

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           LF +L      P V+T+NTLI+GLC       AL+L +EM ++ G    PD+ TY  +++
Sbjct: 377 LFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQ-GLF--PDIFTYTILVN 433

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G  K G+V  A+    +M  + + P+   YN+ I G   + D   A  +  EM+  G  P
Sbjct: 434 GCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPP 493

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           DV+T+N  ++  C+ G  ++   LLE M+  G+ PD VTY S+++GF   G + +ARE+F
Sbjct: 494 DVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVF 553

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M+SKG    V +Y +LI+A+   Q ++ A   + +ML + +  +VITYN +++GL   
Sbjct: 554 NEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMT 613

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
             + +A K  D+M+   ++P+ F++   I+  C  G+  EA+++++ + + K +    T+
Sbjct: 614 RRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTH 673

Query: 473 NCLINGLCK 481
           +  +  L +
Sbjct: 674 SVFLKNLHR 682



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 230/465 (49%), Gaps = 4/465 (0%)

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
           +V  +++R+   P+    N ++  L  E  + +A  ++  +  F   P VVT+NT+++  
Sbjct: 166 LVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSY 225

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+      AL+L  EM  E G  C P+ VTYN +++GL K G +++AK L+ +M +  +N
Sbjct: 226 CKEGRVDQALELLSEM-QERG--CYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLN 282

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
            +  TYN LI GFC    + EA  L  EM++    P + T+N ++   CK  ++  V   
Sbjct: 283 VSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLR 342

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M++    PD V++NSL+ G+C  G IS A  LF  +  +     V +YN LI+  C 
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
              ++ A+ L +EM  + + P + TY  L++G F++G +  A    ++M    + PD F 
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + T I G  K      A  + + +        + TYN  ++ LC+ G  + AC L   + 
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G IPD VT +++I+   K G + KA ++  +M +K   PS VT+  L+          
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              +   KM  EK V +++   + +++ L   ++  E    F  +
Sbjct: 583 LAFMYFSKM-LEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEM 626



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 193/397 (48%), Gaps = 4/397 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    + M+  +  P ++++  L+  L K  Q   V   F  +  +   PD+   N L+
Sbjct: 303 EAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLL 362

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+ G  S AF++   +      P  +T+N LI+GLC  G +  A RL K++      
Sbjct: 363 YGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF 422

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++ T+  L+NG  +     +A   F EM+++     KPD   YN+ I G  K      A
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG---LKPDRFAYNTRIVGEMKIADTSVA 479

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  +M      P+VITYN  +   C   +++EA  L   M+ +G+ PD VT+ ++IN 
Sbjct: 480 FSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIING 539

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K+G + K   +   M+ +GV P  VTY  L+        +  A   F  M+ K    +
Sbjct: 540 FVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPAN 599

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN +IN  C  +++++A   + EM  + I P+  +Y  L++    +G   +AL+L  
Sbjct: 600 VITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYR 659

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +M    + PDSFT + ++  L ++ + + AVQ  +++
Sbjct: 660 EMLDRKIQPDSFTHSVFLKNLHRD-YQVHAVQCVESL 695


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 254/517 (49%), Gaps = 43/517 (8%)

Query: 90  MLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP 149
           +++K    +   +LF  + ++GL P       LI   C+       + +L  + +     
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +  T+  ++ G+C+ G +  A  + K++    C PNVV + TLI    +      A+++ 
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           +EM  +  A   PD+  YNS+I GL K   +D+A+  L++M +  + PN  TY + I G+
Sbjct: 476 KEMKEQGIA---PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM------------------- 310
               ++  A     EM + GV P+ V    +IN  CK GK+                   
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592

Query: 311 -------------DKVNRLLEL---MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
                        DKV+   E+   M  +G+ PD  +Y  L++GF  +G + +A  +F  
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           MV +G   +V  YN+L+   C+  ++E A  L  EM  + + P+ +TY T++ G  + G+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +A +L D+M+L  +VPDSF + T +DG C+   V  A+ +F   +   C      +N 
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNA 771

Query: 475 LINGLCKMGRLKTACKLFHRLQ----HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           LIN + K G+ +   ++ +RL      +   P+ VT + MI +LCKEG ++ A +L   M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +  N +P+ +T+ +LL G+ +  +++++  +  +  A
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/562 (24%), Positives = 256/562 (45%), Gaps = 53/562 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EAV+ F   + ++  P ++   +LL  L +  + D    ++K +    +  D+   ++L
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHML 227

Query: 123 INCLCKMGITS---------------------GAFVVLGRILRSCFTPNTVTFNFLINGL 161
           I   C+ G                        GA  +   ++     P   T++ LI+GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF----- 216
           C   R+ +A  L  +++      +  T++ LI+GL + RN   A  L  EMV+       
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347

Query: 217 ------------------------GAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                                   G I     P    Y S+I+G C++  V +  ELL++
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           MK RNI  +  TY +++ G C   D   A  +  EM+ +G +P+VV +  +I    ++ +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
                R+L+ M ++G+ PD   YNSL+ G     R+  AR   V MV  G + + ++Y  
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
            I+   +  +   A    +EM    + P+ +    L++   + G + +A      M    
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           ++ D+ T+   ++GL KN  V +A ++F+ +R       + +Y  LING  K+G ++ A 
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +F  +  +G  P+V+  + ++   C+ G+++KA +LL +M  K   P+ VT+CT++ G+
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707

Query: 550 VQNNKKSKVVVLLHKMAAEKLV 571
            ++   ++   L  +M  + LV
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLV 729



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 237/518 (45%), Gaps = 46/518 (8%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI     P +  +T L+    +N ++   + + K +   G+ PD+F  N LI  L K   
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A   L  ++ +   PN  T+   I+G         A +  K++      PN V    
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LIN  C+    + A   +  MV++ G +   D  TY  +++GL K+  VD A+E+  +M+
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQ-GIL--GDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + I P+V +Y  LI GF  + + ++A  +F EM++ G+ P+V+ +N ++   C+ G+++
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K   LL+ M  +G++P+ VTY +++DG+C  G ++ A  LF  M  KG   D + Y  L+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 372 NANCKDQKVEDAVCLY--------------------------REMLSERI---------- 395
           +  C+   VE A+ ++                           E+ +E +          
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799

Query: 396 --RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             +P+ +TYN ++  L + GNL  A +L  +MQ  +++P   T+ + ++G  K G   E 
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD-----VVTCS 508
             VF        E     Y+ +IN   K G    A  L  ++  K  + D     + TC 
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            ++    K G+M+ A  ++ +M     +P   T   L+
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 196/405 (48%), Gaps = 15/405 (3%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N+  K G +   EA   +  M+         ++T+L+  L KN + D    +F+ +  
Sbjct: 563 LINEYCKKGKVI--EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ PD+F   +LIN   K+G    A  +   ++    TPN + +N L+ G C  G I +
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  L  +++V    PN VT+ T+I+G C++ +   A +LF+EM  + G +  PD   Y +
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLV--PDSFVYTT 737

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ++DG C+   V++A  +    K +    +   +N+LI         +    +   +MD  
Sbjct: 738 LVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796

Query: 290 V----QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
                +P+ VT+N MI+Y CK+G ++    L   M    + P  +TY SL++G+  +GR 
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI-----RPSVI 400
           +    +F   ++ G   D   Y+++INA  K+     A+ L  +M ++       + S+ 
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           T   LLSG  +VG +  A K+++ M     +PDS T    I+  C
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 179/413 (43%), Gaps = 29/413 (7%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           + + V F  L +G  A+G I EA  +F         P +     L++ L R     +   
Sbjct: 148 SDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD 207

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR------NINPNVIT 261
           +++ MV         DV TY+ +I   C+ G V   K++L + +        N++  +  
Sbjct: 208 VYKGMVERNVVF---DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKL 264

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
             S+IC                     G+ P   T++ +I+  CK  +++    LL  M 
Sbjct: 265 KESMIC--------------------KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 304

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             GV+ D  TY+ L+DG         A+ L   MVS G     Y Y+  I    K+  +E
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A  L+  M++  + P    Y +L+ G  +  N+    +L+ +M+  ++V   +T+ T +
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            G+C +G +  A  + + +    C   +  Y  LI    +  R   A ++   ++ +G  
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           PD+   +++I  L K  +MD+A   L++M      P+  T+   + G+++ ++
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 159/515 (30%), Positives = 253/515 (49%), Gaps = 34/515 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG + +  A+  F+ + +  P    T F+IL+  L K        SL +   +NG   D
Sbjct: 202 KSGKVLA--AMDHFEAVRRSMPVSAAT-FSILINGLVKAGMMIQAHSLAQETTTNGCTID 258

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     ++N L K      A  ++ +I  +  TP   T+N L+NGLC  GR+ EA  L +
Sbjct: 259 IHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 318

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+    C P+VVT+ +LI+GL + + +  A KLF+EM +   A+   D V Y ++I GL 
Sbjct: 319 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLAL---DTVCYTALIRGLL 375

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           + G + +A  +   M      P+V+T +++I G         A  +F  M   G+ P+ V
Sbjct: 376 QTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEV 435

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            ++A+I+  CK  KMD    +L  M +    PDT+TYN L+DG C  G +  AR  F  M
Sbjct: 436 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 495

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +  GC+ DVY+YNILI+  CK    + A  +  +M S R       Y++L+ GL + G L
Sbjct: 496 LEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR-----FVYSSLVDGLCKSGKL 550

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
                L  +M+ + V  +S T    I  LCK   V EAV +F AIR  +       YN +
Sbjct: 551 EGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRK-EGMPHPYAYNSI 608

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+ L K G++     ++  +  +   PD VT + +++ +    +MD+A+   L+M  +  
Sbjct: 609 ISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGY 667

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           VP                     V +LHK+A ++L
Sbjct: 668 VPP--------------------VSILHKLADDRL 682



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 253/505 (50%), Gaps = 21/505 (4%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           LL + A+ K++    +L K   +    PD+   N+LI   C       AF V+ R +   
Sbjct: 125 LLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVI-REMEED 183

Query: 147 F--TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
           F   P+  T N +++GLC  G+++ A   F+ +   +   +  TF+ LINGL +    + 
Sbjct: 184 FGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVR-RSMPVSAATFSILINGLVKAGMMIQ 242

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A  L +E        C  D+ TY +I++ L K+  + +A  L+ ++      P + TYN+
Sbjct: 243 AHSLAQETTTNG---CTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNA 299

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+ G C +   +EA  L  +++DNG  PDVVT+ ++I+   K+ +  +  +L + M  RG
Sbjct: 300 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRG 359

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           +  DTV Y +L+ G    G+I +A  ++ +M S GC  DV + + +I+   K  ++  AV
Sbjct: 360 LALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 419

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            +++ M +  + P+ + Y+ L+ GL +   +  AL+++ +M+     PD+ T+   IDGL
Sbjct: 420 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 479

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           CK+G V  A   F  +    C+  + TYN LI+GLCK G    AC +   +         
Sbjct: 480 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMS-----SSR 534

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
              S+++  LCK G+++    L  +ME ++ V +  T   L+    + N+  + V L + 
Sbjct: 535 FVYSSLVDGLCKSGKLEGGCMLFHEME-RSGVANSQTRTRLIFHLCKANRVDEAVSLFNA 593

Query: 565 MAAEKL--------VVSDLSLSSKV 581
           +  E +        ++S L  S KV
Sbjct: 594 IRKEGMPHPYAYNSIISALIKSGKV 618



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 208/432 (48%), Gaps = 3/432 (0%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R  F  +  T N L++      R  EA  L K        P+V T+N LI G C  R   
Sbjct: 112 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPE 171

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  +  EM  +FG    P + T+N ++ GLCK G V  A +    ++ R++  +  T++
Sbjct: 172 EAFAVIREMEEDFG--VAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVR-RSMPVSAATFS 228

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            LI G        +A  L  E   NG   D+ T+ A++N+  K+ K+ +   L+E +   
Sbjct: 229 ILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITAN 288

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G  P   TYN+L++G C +GR+  A +L   +V  GC  DV +Y  LI+   K+++  +A
Sbjct: 289 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 348

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L++EM S  +    + Y  L+ GL Q G +  A  +   M  +  VPD  T +T IDG
Sbjct: 349 YKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 408

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           L K G +  AV++F+++           Y+ LI+GLCK  ++  A ++  +++     PD
Sbjct: 409 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 468

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            +T + +I  LCK G ++ A     +M    C P   T+  L+ G  +         +L 
Sbjct: 469 TITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLD 528

Query: 564 KMAAEKLVVSDL 575
            M++ + V S L
Sbjct: 529 DMSSSRFVYSSL 540



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 222/455 (48%), Gaps = 23/455 (5%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++T ++  LAKNK+    V+L +++ +NG  P +   N L+N LCKMG    A  +L +I
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 320

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           + +  TP+ VT+  LI+GL  E R  EA +LFK++       + V +  LI GL +T   
Sbjct: 321 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKI 380

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A  +++ M +     C PDVVT +++IDGL K G +  A  +   M+ R + PN + Y
Sbjct: 381 PQASSVYKTMTSHG---CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVY 437

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           ++LI G C       A  +  +M      PD +T+N +I+  CK G ++      + M++
Sbjct: 438 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE 497

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G  PD  TYN L+ G C  G    A  +   M S       + Y+ L++  CK  K+E 
Sbjct: 498 AGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSLVDGLCKSGKLEG 552

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
              L+ EM    +  S  T   L+  L +   + +A+ L + ++  + +P  + + + I 
Sbjct: 553 GCMLFHEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIR-KEGMPHPYAYNSIIS 610

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
            L K+G V E   V+Q +       R+ TYN L+NG+    R+  A   +  +  +G +P
Sbjct: 611 ALIKSGKVNEGQAVYQEMTRWWKPDRV-TYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
            V    +++H L        A+D L DM      P
Sbjct: 670 PV----SILHKL--------ADDRLKDMPGPASRP 692



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 161/365 (44%), Gaps = 43/365 (11%)

Query: 260 ITYNSLICGFCCVDD----WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           I+ ++++  F C+ D    W+  +CL       G Q  V T NA+++   +  +  +   
Sbjct: 83  ISTDAVVKIFQCLKDADLAWELFQCLSSPRF--GFQHSVHTGNALLDVFARTKRHREAGN 140

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-GCRHDVYSYNILINAN 374
           LL+  +     PD  T+N L+ G+CL      A  +   M    G    + ++N++++  
Sbjct: 141 LLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGL 200

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK  KV  A+  + E +   +  S  T++ L++GL + G +  A  L  +   N    D 
Sbjct: 201 CKSGKVLAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDI 259

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   ++ L KN  + EAV + + I    C   I TYN L+NGLCKMGRL+ A  L  +
Sbjct: 260 HTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 319

Query: 495 LQHKGPIPDVVTCSTMIHWLCKE-----------------------------------GQ 519
           +   G  PDVVT +++I  L KE                                   G+
Sbjct: 320 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGK 379

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           + +A+ +   M +  CVP  VT  T++ G  +  +    V +   M A  L  +++  S+
Sbjct: 380 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 439

Query: 580 KVVDL 584
            +  L
Sbjct: 440 LIHGL 444


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 254/517 (49%), Gaps = 43/517 (8%)

Query: 90  MLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTP 149
           +++K    +   +LF  + ++GL P       LI   C+       + +L  + +     
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +  T+  ++ G+C+ G +  A  + K++    C PNVV + TLI    +      A+++ 
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           +EM  +  A   PD+  YNS+I GL K   +D+A+  L++M +  + PN  TY + I G+
Sbjct: 476 KEMKEQGIA---PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM------------------- 310
               ++  A     EM + GV P+ V    +IN  CK GK+                   
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592

Query: 311 -------------DKVNRLLEL---MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
                        DKV+   E+   M  +G+ PD  +Y  L++GF  +G + +A  +F  
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           MV +G   +V  YN+L+   C+  ++E A  L  EM  + + P+ +TY T++ G  + G+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L +A +L D+M+L  +VPDSF + T +DG C+   V  A+ +F   +   C      +N 
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNA 771

Query: 475 LINGLCKMGRLKTACKLFHRLQ----HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           LIN + K G+ +   ++ +RL      +   P+ VT + MI +LCKEG ++ A +L   M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +  N +P+ +T+ +LL G+ +  +++++  +  +  A
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/562 (24%), Positives = 256/562 (45%), Gaps = 53/562 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EAV+ F   + ++  P ++   +LL  L +  + D    ++K +    +  D+   ++L
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHML 227

Query: 123 INCLCKMGITS---------------------GAFVVLGRILRSCFTPNTVTFNFLINGL 161
           I   C+ G                        GA  +   ++     P   T++ LI+GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF----- 216
           C   R+ +A  L  +++      +  T++ LI+GL + RN   A  L  EMV+       
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347

Query: 217 ------------------------GAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                                   G I     P    Y S+I+G C++  V +  ELL++
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           MK RNI  +  TY +++ G C   D   A  +  EM+ +G +P+VV +  +I    ++ +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
                R+L+ M ++G+ PD   YNSL+ G     R+  AR   V MV  G + + ++Y  
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
            I+   +  +   A    +EM    + P+ +    L++   + G + +A      M    
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           ++ D+ T+   ++GL KN  V +A ++F+ +R       + +Y  LING  K+G ++ A 
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +F  +  +G  P+V+  + ++   C+ G+++KA +LL +M  K   P+ VT+CT++ G+
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707

Query: 550 VQNNKKSKVVVLLHKMAAEKLV 571
            ++   ++   L  +M  + LV
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLV 729



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 237/518 (45%), Gaps = 46/518 (8%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI     P +  +T L+    +N ++   + + K +   G+ PD+F  N LI  L K   
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A   L  ++ +   PN  T+   I+G         A +  K++      PN V    
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LIN  C+    + A   +  MV++ G +   D  TY  +++GL K+  VD A+E+  +M+
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQ-GIL--GDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + I P+V +Y  LI GF  + + ++A  +F EM++ G+ P+V+ +N ++   C+ G+++
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K   LL+ M  +G++P+ VTY +++DG+C  G ++ A  LF  M  KG   D + Y  L+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 372 NANCKDQKVEDAVCLY--------------------------REMLSERI---------- 395
           +  C+   VE A+ ++                           E+ +E +          
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799

Query: 396 --RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             +P+ +TYN ++  L + GNL  A +L  +MQ  +++P   T+ + ++G  K G   E 
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD-----VVTCS 508
             VF        E     Y+ +IN   K G    A  L  ++  K  + D     + TC 
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            ++    K G+M+ A  ++ +M     +P   T   L+
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 196/405 (48%), Gaps = 15/405 (3%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N+  K G +   EA   +  M+         ++T+L+  L KN + D    +F+ +  
Sbjct: 563 LINEYCKKGKVI--EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ PD+F   +LIN   K+G    A  +   ++    TPN + +N L+ G C  G I +
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  L  +++V    PN VT+ T+I+G C++ +   A +LF+EM  + G +  PD   Y +
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLV--PDSFVYTT 737

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ++DG C+   V++A  +    K +    +   +N+LI         +    +   +MD  
Sbjct: 738 LVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796

Query: 290 V----QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
                +P+ VT+N MI+Y CK+G ++    L   M    + P  +TY SL++G+  +GR 
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI-----RPSVI 400
           +    +F   ++ G   D   Y+++INA  K+     A+ L  +M ++       + S+ 
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           T   LLSG  +VG +  A K+++ M     +PDS T    I+  C
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/413 (22%), Positives = 178/413 (43%), Gaps = 29/413 (7%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           + + V F  L +G  A+  I EA  +F         P +     L++ L R     +   
Sbjct: 148 SDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD 207

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR------NINPNVIT 261
           +++ MV         DV TY+ +I   C+ G V   K++L + +        N++  +  
Sbjct: 208 VYKGMVERNVVF---DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKL 264

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
             S+IC                     G+ P   T++ +I+  CK  +++    LL  M 
Sbjct: 265 KESMIC--------------------KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 304

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             GV+ D  TY+ L+DG         A+ L   MVS G     Y Y+  I    K+  +E
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A  L+  M++  + P    Y +L+ G  +  N+    +L+ +M+  ++V   +T+ T +
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            G+C +G +  A  + + +    C   +  Y  LI    +  R   A ++   ++ +G  
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           PD+   +++I  L K  +MD+A   L++M      P+  T+   + G+++ ++
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 243/489 (49%), Gaps = 4/489 (0%)

Query: 74  KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS 133
           +MK SP   +   +L  L + +++D+V   ++ + S GL PD+ +  +L  C  K G+ S
Sbjct: 157 EMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
               +L  +      PN   +   I  LC + ++ EA ++F+ +      PN+ T++ +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           +G C+T N   A  L++E++    A   P+VV + +++DG CK   +  A+ L + M   
Sbjct: 277 DGYCKTGNVRQAYGLYKEILV---AELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKF 333

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            ++PN+  YN LI G C   +  EA  L  EM    + PDV T+  +IN  C + ++ + 
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           NRL + M    + P + TYNSL+ G+C    + +A +L   M + G   ++ +++ LI+ 
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C  + ++ A+ LY EM  + I P V+TY  L+   F+  N+ +AL+L   M    + P+
Sbjct: 454 YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPN 513

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             TFA  +DG  K G +  A+  +Q     +       + CLI GLC+ G +  A + F 
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            ++  G  PD+ +  +M+    +E ++     L  DM     +P+ +    LL  F Q N
Sbjct: 574 DMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN-LLVNQLLARFYQAN 632

Query: 554 KKSKVVVLL 562
              K    L
Sbjct: 633 GYVKSACFL 641



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 157/318 (49%), Gaps = 1/318 (0%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+  G+ PDV  +  +     K G   K  +LL+ M   G+ P+   Y   +   C   +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A ++F  M   G   ++Y+Y+ +I+  CK   V  A  LY+E+L   + P+V+ + T
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ G  +   L  A  L   M    V P+ + +   I G CK+G +LEAV +   + +  
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + TY  LINGLC   ++  A +LF +++++   P   T +++IH  CKE  M++A 
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           DL  +M A    P+ +TF TL+ G+  N +  K  + L+     K +V D+   + ++D 
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYC-NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488

Query: 585 LSKDKKYRECLNQFRHLL 602
             K+   +E L  +  +L
Sbjct: 489 HFKEANMKEALRLYSDML 506



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 144/290 (49%)

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PD     +++N   +  + D V    +LMI RG+ PD   Y  L       G  S+  +L
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              M S G + +VY Y I I   C+D K+E+A  ++  M    + P++ TY+ ++ G  +
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            GN+  A  L  ++ + +++P+   F T +DG CK   ++ A  +F  +     +  +  
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YNCLI+G CK G +  A  L   ++     PDV T + +I+ LC E Q+ +AN L   M+
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            +   PS  T+ +L+ G+ +     + + L  +M A  +  + ++ S+ +
Sbjct: 402 NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 34/285 (11%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSGN+   EAV     M  +  SP + ++TIL+  L    Q      LF+++ +  +FP 
Sbjct: 351 KSGNML--EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS 408

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N LI+  CK      A  +   +  S   PN +TF+ LI+G C    I  A  L+ 
Sbjct: 409 SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYF 468

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV------NEFGAICKPD------ 223
           ++ +    P+VVT+  LI+   +  N   AL+L+ +M+      N+    C  D      
Sbjct: 469 EMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEG 528

Query: 224 --------------------VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
                                V +  +I+GLC++G++ +A      M+   I P++ +Y 
Sbjct: 529 RLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYV 588

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           S++ G        +   L  +M+  G+ P+++    +  +   +G
Sbjct: 589 SMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANG 633


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/437 (31%), Positives = 240/437 (54%), Gaps = 13/437 (2%)

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           N +  D+ VL    N   ++G     F    R     +  + ++   L+  L  E R  +
Sbjct: 152 NSIIADMLVLAYANNSRFELG-----FEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
              ++K++      PNV TFN +IN LC+T     A  + E+M   +G  C P+VV+YN+
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM-KVYG--CSPNVVSYNT 263

Query: 230 IIDGLCK---DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           +IDG CK   +G + KA  +L +M + +++PN+ T+N LI GF   D+   +  +F EM+
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           D  V+P+V+++N++IN  C  GK+ +   + + M+  GV P+ +TYN+L++GFC    + 
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A ++F S+  +G       YN+LI+A CK  K++D   L  EM  E I P V TYN L+
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           +GL + GN+  A KL D++  +  +PD  TF   ++G C+ G   +A  + + +     +
Sbjct: 444 AGLCRNGNIEAAKKLFDQLT-SKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP-DVVTCSTMIHWLCKEGQMDKAND 525
            R  TYN ++ G CK G LK A  +  +++ +  +  +V + + ++    ++G+++ AN 
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562

Query: 526 LLLDMEAKNCVPSEVTF 542
           LL +M  K  VP+ +T+
Sbjct: 563 LLNEMLEKGLVPNRITY 579



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 222/437 (50%), Gaps = 8/437 (1%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +L+   A N +++     FKR    G          L+  L K   ++    V   ++R 
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRR 217

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR---TRNT 202
              PN  TFN +IN LC  G++ +A  + + + V+ C PNVV++NTLI+G C+       
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A  + +EMV        P++ T+N +IDG  KD  +  + ++  +M D+++ PNVI+Y
Sbjct: 278 YKADAVLKEMVEN---DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           NSLI G C      EA  +  +M+  GVQP+++T+NA+IN  CK+  + +   +   +  
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +G  P T  YN L+D +C +G+I     L   M  +G   DV +YN LI   C++  +E 
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+ ++ S+ + P ++T++ L+ G  + G    A  L+ +M    + P   T+   + 
Sbjct: 455 AKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMK 513

Query: 443 GLCKNGFVLEAVQV-FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           G CK G +  A  +  Q  +  +  + + +YN L+ G  + G+L+ A  L + +  KG +
Sbjct: 514 GYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573

Query: 502 PDVVTCSTMIHWLCKEG 518
           P+ +T   +   +  +G
Sbjct: 574 PNRITYEIVKEEMVDQG 590



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 178/331 (53%), Gaps = 39/331 (11%)

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           + + ++ EM+   +QP+V TFN +IN  CK GKM+K   ++E M   G +P+ V+YN+L+
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265

Query: 337 DGFCLVG---RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           DG+C +G   ++ +A  +   MV      ++ ++NILI+   KD  +  ++ +++EML +
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            ++P+VI+YN+L++GL   G + +A+ + DKM    V P+  T+   I+G CKN  + EA
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385

Query: 454 VQVFQAIR---------------NCKCEL--------------------RIETYNCLING 478
           + +F +++               +  C+L                     + TYNCLI G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LC+ G ++ A KLF +L  KG +PD+VT   ++   C++G+  KA  LL +M      P 
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
            +T+  +++G+ +         +  +M  E+
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 5/315 (1%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
            GN    +A      M++   SP +T+F IL+    K+      + +FK +    + P++
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              N LIN LC  G  S A  +  +++ +   PN +T+N LING C    + EA  +F  
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P    +N LI+  C+         L EEM  E G +  PDV TYN +I GLC+
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE-GIV--PDVGTYNCLIAGLCR 448

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +G ++ AK+L  Q+  + + P+++T++ L+ G+C   + ++A  L  EM   G++P  +T
Sbjct: 449 NGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507

Query: 297 FNAMINYNCKDGKMDKV-NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           +N ++   CK+G +    N   ++  +R +  +  +YN L+ G+   G++  A  L   M
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567

Query: 356 VSKGCRHDVYSYNIL 370
           + KG   +  +Y I+
Sbjct: 568 LEKGLVPNRITYEIV 582



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 142/268 (52%), Gaps = 3/268 (1%)

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           K+ +   V  + + MI+R + P+  T+N +++  C  G++++AR++   M   GC  +V 
Sbjct: 200 KENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVV 259

Query: 366 SYNILINANCK---DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           SYN LI+  CK   + K+  A  + +EM+   + P++ T+N L+ G ++  NL  ++K+ 
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M   DV P+  ++ + I+GLC  G + EA+ +   + +   +  + TYN LING CK 
Sbjct: 320 KEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             LK A  +F  ++ +G +P     + +I   CK G++D    L  +ME +  VP   T+
Sbjct: 380 DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             L+ G  +N        L  ++ ++ L
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKGL 467



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 121/231 (52%), Gaps = 3/231 (1%)

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           R +    ++  M+ +  + +V+++N++INA CK  K+  A  +  +M      P+V++YN
Sbjct: 203 RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYN 262

Query: 404 TLLSGLFQVGNLGDALK---LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TL+ G  ++G  G   K   ++ +M  NDV P+  TF   IDG  K+  +  +++VF+ +
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            +   +  + +YN LINGLC  G++  A  +  ++   G  P+++T + +I+  CK   +
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +A D+   ++ +  VP+   +  L+  + +  K      L  +M  E +V
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/479 (30%), Positives = 240/479 (50%), Gaps = 5/479 (1%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD MI+    P + +   +L +L          +++  +   G+ P +   N +++  CK
Sbjct: 168 FDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCK 227

Query: 129 MGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
            G    A  +L  +  R C+ PN VT+N L+NGL  +G + +A  L +++     + +  
Sbjct: 228 EGRVDQALELLSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+N LING C+    + A  L EEMVN       P + TYN+++ GLCK   V   +   
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAF---PTLSTYNTLMYGLCKWVQVTGVRLRF 343

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M      P+++++NSL+ G+C      EA  LF E+    + P V+T+N +I+  C  
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D   RL + M  +G+ PD  TY  L++G   +G +S AR  F  M+SKG + D ++Y
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N  I    K      A  +  EML+    P VITYN  +  L Q GN  +A  L++ M  
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           + ++PD  T+ + I+G  KNG + +A +VF  + +      + TY  LI+       L  
Sbjct: 524 DGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDL 583

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           A   F ++  K    +V+T + +I+ LC   +MD+A     +ME K  +P++ ++  L+
Sbjct: 584 AFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 205/369 (55%), Gaps = 3/369 (0%)

Query: 113 FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
           FP L   N L+  LCK    +G  +    +L+S FTP+ V+FN L+ G C  G I EA  
Sbjct: 317 FPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFL 376

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           LF +L      P V+T+NTLI+GLC       AL+L +EM ++ G    PD+ TY  +++
Sbjct: 377 LFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQ-GLF--PDIFTYTILVN 433

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G  K G+V  A+    +M  + + P+   YN+ I G   + D   A  +  EM+  G  P
Sbjct: 434 GCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPP 493

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           DV+T+N  ++  C+ G  ++   LLE M+  G+ PD VTY S+++GF   G + +ARE+F
Sbjct: 494 DVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVF 553

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M+SKG    V +Y +LI+A+   Q ++ A   + +ML + +  +VITYN +++GL   
Sbjct: 554 NEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMT 613

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
             + +A K  D+M+   ++P+ F++   I+  C  G+  EA+++++ + + K +    T+
Sbjct: 614 RRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTH 673

Query: 473 NCLINGLCK 481
           +  +  L +
Sbjct: 674 SVFLKNLHR 682



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 230/465 (49%), Gaps = 4/465 (0%)

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
           +V  +++R+   P+    N ++  L  E  + +A  ++  +  F   P VVT+NT+++  
Sbjct: 166 LVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSY 225

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+      AL+L  EM  E G  C P+ VTYN +++GL K G +++AK L+ +M +  +N
Sbjct: 226 CKEGRVDQALELLSEM-QERG--CYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLN 282

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
            +  TYN LI GFC    + EA  L  EM++    P + T+N ++   CK  ++  V   
Sbjct: 283 VSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLR 342

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M++    PD V++NSL+ G+C  G IS A  LF  +  +     V +YN LI+  C 
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
              ++ A+ L +EM  + + P + TY  L++G F++G +  A    ++M    + PD F 
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + T I G  K      A  + + +        + TYN  ++ LC+ G  + AC L   + 
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G IPD VT +++I+   K G + KA ++  +M +K   PS VT+  L+          
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              +   KM  EK V +++   + +++ L   ++  E    F  +
Sbjct: 583 LAFMYFSKM-LEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEM 626



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 204/419 (48%), Gaps = 10/419 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    + M+  +  P ++++  L+  L K  Q   V   F  +  +   PD+   N L+
Sbjct: 303 EAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLL 362

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+ G  S AF++   +      P  +T+N LI+GLC  G +  A RL K++      
Sbjct: 363 YGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF 422

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++ T+  L+NG  +     +A   F EM+++     KPD   YN+ I G  K      A
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG---LKPDRFAYNTRIVGEMKIADTSVA 479

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  +M      P+VITYN  +   C   +++EA  L   M+ +G+ PD VT+ ++IN 
Sbjct: 480 FSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIING 539

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K+G + K   +   M+ +GV P  VTY  L+        +  A   F  M+ K    +
Sbjct: 540 FVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPAN 599

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN +IN  C  +++++A   + EM  + I P+  +Y  L++    +G   +AL+L  
Sbjct: 600 VITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYR 659

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-IRNCK--CELRIETYNCLINGL 479
           +M    + PDSFT + ++  L ++ + + AVQ  ++ I+N +    +RIE    LI GL
Sbjct: 660 EMLDRKIQPDSFTHSVFLKNLHRD-YQVHAVQCVESLIQNVEDNINVRIEM---LIGGL 714


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 253/491 (51%), Gaps = 6/491 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M      P + ++++L+    K +  +TVV L   + + G+ P+++   + I
Sbjct: 189 EAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICI 248

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L + G    A+ +L ++      P+ VT   LI  LC  GR+ +A  +F K+      
Sbjct: 249 RVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQK 308

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD-VVTYNSIIDGLCKDGFVDK 242
           P+ VT+ TL++    + ++    +   E+ N   A    D VV+Y + +D LC+ G VD+
Sbjct: 309 PDRVTYITLLDKCGDSGDS----RSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDE 364

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++  +MK + I P   +YNSLI GF   D +  A  LF  M  +G  P+  T    IN
Sbjct: 365 ALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFIN 424

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           Y+ K G+  K  +  ELM  +G+ PD V  N+++ G    GR+  A+ +F  + + G   
Sbjct: 425 YHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISP 484

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +Y ++I    K    ++A+ ++ EM+  R  P V+  N+L+  L++ G   +A K+ 
Sbjct: 485 DNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIF 544

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +++  ++ P   T+ T + GL + G V E +Q+ + + +      I TYN +++ LCK 
Sbjct: 545 YELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKN 604

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G +  A  + + +   G +PD+ + +T+++ L KEG++D+A  +   M+ K   P   T 
Sbjct: 605 GEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYATV 663

Query: 543 CTLLRGFVQNN 553
           CT+L  FV++ 
Sbjct: 664 CTILPSFVRSG 674



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/570 (25%), Positives = 266/570 (46%), Gaps = 41/570 (7%)

Query: 69   FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
            F  +  M  SP   ++T+++   +K    D  + +F  +  N   PD+  +N LI+ L K
Sbjct: 474  FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533

Query: 129  MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
             G  + A+ +   +      P   T+N L+ GL  EG++ E  +L + +N  +  PN++T
Sbjct: 534  AGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIIT 593

Query: 189  FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
            +NT+++ LC+      AL +   M       C PD+ +YN+++ GL K+G +D+A  +  
Sbjct: 594  YNTVLDCLCKNGEVNYALDMLYSMTMNG---CMPDLSSYNTVMYGLVKEGRLDEAFWMFC 650

Query: 249  QMKDRNINPNVITYNSLICGF---------------------CCVD-------------- 273
            QMK + + P+  T  +++  F                       VD              
Sbjct: 651  QMK-KVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKR 709

Query: 274  DWKEAKCLFIE-MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
            D  E    F E +  +G+  D +  + +I + CK  +    + L++     GV+  T +Y
Sbjct: 710  DGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSY 769

Query: 333  NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
            N+L+ G      I  A ELF  M   GC  D ++Y+++++A  K  ++ED + +  EM +
Sbjct: 770  NALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHN 829

Query: 393  ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
            +  + + +TYNT++SGL +   L +A+ L  ++      P   T+   +DGL K+G + +
Sbjct: 830  KGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIED 889

Query: 453  AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
            A  +F  +  C CE     YN L+NG    G  +  C+LF  +  +G  PD+ + + +I 
Sbjct: 890  AEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVID 949

Query: 513  WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             LC +G+++        +      P  +T+  L+ G  ++ +  + + L + M  +K + 
Sbjct: 950  TLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDM-EKKGIA 1008

Query: 573  SDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             +L   + ++  L K  K  E    +  LL
Sbjct: 1009 PNLYTYNSLILYLGKAGKAAEAGKMYEELL 1038



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 255/530 (48%), Gaps = 40/530 (7%)

Query: 55   HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
            +K+G    NEA   F  + +M   P   ++  LL  L +  +   V+ L + +NSN   P
Sbjct: 532  YKAGR--GNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPP 589

Query: 115  DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
            ++   N +++CLCK G  + A  +L  +  +   P+  ++N ++ GL  EGR+ EA  +F
Sbjct: 590  NIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMF 649

Query: 175  KKLN-VFACD--------PNVV--------------------------TFNTLINGLCRT 199
             ++  V A D        P+ V                          + ++L+ G+ + 
Sbjct: 650  CQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKR 709

Query: 200  RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
              T  +++ F E +   G +   D +  + II   CK      A EL+ + ++  ++   
Sbjct: 710  DGTEKSIE-FAENIASSGLLL--DDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKT 766

Query: 260  ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
             +YN+LICG    D    A+ LF EM   G  PD  T++ +++   K  +++ + ++ E 
Sbjct: 767  GSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEE 826

Query: 320  MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
            M  +G     VTYN+++ G      +  A  L+  ++S+G      +Y  L++   KD  
Sbjct: 827  MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886

Query: 380  VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            +EDA  L+ EML     P+   YN LL+G    G+     +L + M    + PD  ++  
Sbjct: 887  IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946

Query: 440  YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
             ID LC +G + + +  F+ + +   E  + TYN LI+GL K GRL+ A  L++ ++ KG
Sbjct: 947  VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006

Query: 500  PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
              P++ T +++I +L K G+  +A  +  ++ AK   P+  T+  L+RG+
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGY 1056



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 237/545 (43%), Gaps = 72/545 (13%)

Query: 129 MGITSG---AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           +G+  G   A V L  +  +    N  T+N LI  L   G   EA  ++K +      P 
Sbjct: 146 VGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPT 205

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEM------------------VNEFGAI-------- 219
           V T++ L+    + R+    + L  EM                  + + G +        
Sbjct: 206 VRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILR 265

Query: 220 ------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
                 CKPDVVT   +I  LC  G +  AK++  +MK  +  P+ +TY +L+       
Sbjct: 266 KMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSG 325

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           D +    ++  +  +G   +VV++ A ++  C+ G++D+   + + M Q+G+ P   +YN
Sbjct: 326 DSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYN 385

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           SL+ GF    R +RA ELF  M   G   + Y++ + IN + K  +   A+  Y  M S+
Sbjct: 386 SLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSK 445

Query: 394 RIRPSVITYNTLLSGLFQVGNLG-----------------------------------DA 418
            I P V+  N +L GL + G LG                                   +A
Sbjct: 446 GIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEA 505

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           +K+  +M  N   PD     + ID L K G   EA ++F  ++    E    TYN L+ G
Sbjct: 506 MKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAG 565

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L + G++K   +L   +      P+++T +T++  LCK G+++ A D+L  M    C+P 
Sbjct: 566 LGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD 625

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             ++ T++ G V+  +  +   +  +M  +K++  D +    ++    +    +E L+  
Sbjct: 626 LSSYNTVMYGLVKEGRLDEAFWMFCQM--KKVLAPDYATVCTILPSFVRSGLMKEALHTV 683

Query: 599 RHLLF 603
           R  + 
Sbjct: 684 REYIL 688



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 170/350 (48%), Gaps = 3/350 (0%)

Query: 157  LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
            +I   C     + A  L KK           ++N LI GL       +A +LF EM    
Sbjct: 737  IIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEM-KRL 795

Query: 217  GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
            G  C PD  TY+ I+D + K   ++   ++  +M ++      +TYN++I G        
Sbjct: 796  G--CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLD 853

Query: 277  EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
            EA  L+ ++M  G  P   T+  +++   KDG ++    L + M++ G  P+   YN L+
Sbjct: 854  EAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILL 913

Query: 337  DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            +G+ + G   +  ELF SMV +G   D+ SY ++I+  C D ++ D +  ++++    + 
Sbjct: 914  NGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLE 973

Query: 397  PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
            P +ITYN L+ GL + G L +AL L + M+   + P+ +T+ + I  L K G   EA ++
Sbjct: 974  PDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKM 1033

Query: 457  FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            ++ +     +  + TYN LI G    G  + A   + R+   G  P+  T
Sbjct: 1034 YEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSST 1083



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/496 (23%), Positives = 226/496 (45%), Gaps = 41/496 (8%)

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
           F+ + R  R   T  T + N+++  + A GR+ + A++F  +       NV TF T+  G
Sbjct: 88  FLSVARQPRVVHT--TESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVF-G 144

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
                  L +  +   ++ E G +   +  TYN +I  L K GF  +A ++   M    +
Sbjct: 145 AVGVEGGLRSAPVALPVMKEAGIVL--NAYTYNGLIYFLVKSGFDREAMDVYKAMAADGV 202

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P V TY+ L+  F    D +    L  EM   GV+P+V ++   I    + G++++  R
Sbjct: 203 VPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYR 262

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK----------------- 358
           +L  M + G  PD VT   L+   C  GR++ A+++F  M +                  
Sbjct: 263 ILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCG 322

Query: 359 ------------------GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                             G   +V SY   ++A C+  +V++A+ ++ EM  + I P   
Sbjct: 323 DSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQY 382

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YN+L+SG  +      AL+L + M ++   P+ +T   +I+   K+G  L+A++ ++ +
Sbjct: 383 SYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELM 442

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           ++      +   N ++ GL K GRL  A ++FH L+  G  PD +T + MI    K    
Sbjct: 443 KSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNA 502

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           D+A  +  +M    C P  +   +L+    +  + ++   + +++    L  +D + ++ 
Sbjct: 503 DEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTL 562

Query: 581 VVDLLSKDKKYRECLN 596
           +   L ++ K +E + 
Sbjct: 563 LAG-LGREGKVKEVMQ 577



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 132/574 (22%), Positives = 251/574 (43%), Gaps = 39/574 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N A+  F+ M    P+P   +  + +    K+ +    +  ++ + S G+ PD+   N +
Sbjct: 398 NRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAV 457

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  L K G    A  V   +     +P+ +T+  +I          EA ++F ++    C
Sbjct: 458 LYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRC 517

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+V+  N+LI+ L +      A K+F E+  E     +P   TYN+++ GL ++G V +
Sbjct: 518 APDVLAMNSLIDMLYKAGRGNEAWKIFYEL-KEMN--LEPTDCTYNTLLAGLGREGKVKE 574

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
             +LL  M   +  PN+ITYN+++   C   +   A  +   M  NG  PD+ ++N ++ 
Sbjct: 575 VMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMY 634

Query: 303 YNCKDGKMDK-----------------------------------VNRLLELMIQRGVNP 327
              K+G++D+                                   ++ + E ++Q     
Sbjct: 635 GLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKV 694

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  + +SLM+G        ++ E   ++ S G   D    + +I   CK ++   A  L 
Sbjct: 695 DRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELV 754

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           ++  +  +     +YN L+ GL     +  A +L  +M+     PD FT+   +D + K+
Sbjct: 755 KKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKS 814

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             + + +++ + + N   +    TYN +I+GL K   L  A  L+++L  +G  P   T 
Sbjct: 815 MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 874

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
             ++  L K+G ++ A  L  +M    C P+   +  LL G+       KV  L   M  
Sbjct: 875 GPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESM-V 933

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           E+ +  D+   + V+D L  D +  + L+ F+ L
Sbjct: 934 EQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 181/391 (46%), Gaps = 38/391 (9%)

Query: 82   TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            +S   L+  + K    +  +   + + S+GL  D   L+ +I   CK      A  ++ +
Sbjct: 697  SSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKK 756

Query: 142  ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN---------------- 185
                  +  T ++N LI GL  E  I  A  LF ++    CDP+                
Sbjct: 757  FENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMR 816

Query: 186  -------------------VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
                                VT+NT+I+GL +++    A+ L+ ++++E      P   T
Sbjct: 817  IEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEG---FSPTPCT 873

Query: 227  YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
            Y  ++DGL KDG ++ A+ L  +M +    PN   YN L+ G+    D ++   LF  M+
Sbjct: 874  YGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMV 933

Query: 287  DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            + G+ PD+ ++  +I+  C DG+++      + +   G+ PD +TYN L+ G    GR+ 
Sbjct: 934  EQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLE 993

Query: 347  RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
             A  L+  M  KG   ++Y+YN LI    K  K  +A  +Y E+L++  +P+V TYN L+
Sbjct: 994  EALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALI 1053

Query: 407  SGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             G    G+  +A     +M +    P+S T+
Sbjct: 1054 RGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 156/308 (50%), Gaps = 3/308 (0%)

Query: 65   AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
            A   F  M ++   P   ++ ++L  + K+ + + ++ + + +++ G        N +I+
Sbjct: 785  AEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS 844

Query: 125  CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             L K  +   A  +  +++   F+P   T+  L++GL  +G I +A  LF ++    C+P
Sbjct: 845  GLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEP 904

Query: 185  NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
            N   +N L+NG     +T    +LFE MV +      PD+ +Y  +ID LC DG ++   
Sbjct: 905  NCAIYNILLNGYRIAGDTEKVCELFESMVEQG---MNPDIKSYTVVIDTLCADGRLNDGL 961

Query: 245  ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
                Q+ D  + P++ITYN LI G       +EA  L+ +M   G+ P++ T+N++I Y 
Sbjct: 962  SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYL 1021

Query: 305  CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
             K GK  +  ++ E ++ +G  P+  TYN+L+ G+ + G    A   +  M+  GCR + 
Sbjct: 1022 GKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNS 1081

Query: 365  YSYNILIN 372
             +Y  L N
Sbjct: 1082 STYMQLPN 1089



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 120/504 (23%), Positives = 209/504 (41%), Gaps = 42/504 (8%)

Query: 79   PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
            P + ++  +L  L KN + +  + +   +  NG  PDL   N ++  L K G    AF +
Sbjct: 589  PNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWM 648

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV--VTFNTLINGL 196
              + ++    P+  T   ++      G + EA    ++  +   D  V   + ++L+ G+
Sbjct: 649  FCQ-MKKVLAPDYATVCTILPSFVRSGLMKEALHTVREY-ILQPDSKVDRSSVHSLMEGI 706

Query: 197  -----------------------------------CRTRNTLVALKLFEEMVNEFGAICK 221
                                               C+ +  L A +L ++  N  G   K
Sbjct: 707  LKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFEN-LGVSLK 765

Query: 222  PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
                +YN++I GL  +  +D A+EL  +MK    +P+  TY+ ++         ++   +
Sbjct: 766  --TGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKI 823

Query: 282  FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              EM + G +   VT+N +I+   K   +D+   L   ++  G +P   TY  L+DG   
Sbjct: 824  QEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLK 883

Query: 342  VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             G I  A  LF  M+  GC  +   YNIL+N        E    L+  M+ + + P + +
Sbjct: 884  DGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKS 943

Query: 402  YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
            Y  ++  L   G L D L    ++    + PD  T+   I GL K+G + EA+ ++  + 
Sbjct: 944  YTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDME 1003

Query: 462  NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                   + TYN LI  L K G+   A K++  L  KG  P+V T + +I      G  +
Sbjct: 1004 KKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPE 1063

Query: 522  KANDLLLDMEAKNCVPSEVTFCTL 545
             A      M    C P+  T+  L
Sbjct: 1064 NAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 149/331 (45%), Gaps = 42/331 (12%)

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK----DGKMDKVNRLLELMIQRGVNPDT 329
           D +EA  LF+ +     QP VV      NY  +     G++  V ++ +LM ++ +  + 
Sbjct: 80  DPEEALELFLSV---ARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANV 136

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            T+ ++     + G +  A      M   G   + Y+YN LI    K     +A+ +Y+ 
Sbjct: 137 GTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKA 196

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M ++ + P+V TY+ L+    +  +    + L+ +M+   V P+ +++   I  L + G 
Sbjct: 197 MAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGR 256

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + EA ++ + +    C+  + T   LI  LC  GRL  A  +F +++     PD VT  T
Sbjct: 257 LEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316

Query: 510 MIH--------------W---------------------LCKEGQMDKANDLLLDMEAKN 534
           ++               W                     LC+ G++D+A D+  +M+ K 
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +P + ++ +L+ GF++ ++ ++ + L + M
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHM 407



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            N+ + +F  +  M   P + ++ +L+  L K+ + +  +SL+  +   G+ P+L+  N L
Sbjct: 958  NDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSL 1017

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I  L K G  + A  +   +L   + PN  T+N LI G    G    A   + ++ V  C
Sbjct: 1018 ILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGC 1077

Query: 183  DPNVVTFNTLIN 194
             PN  T+  L N
Sbjct: 1078 RPNSSTYMQLPN 1089


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 222/426 (52%), Gaps = 7/426 (1%)

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           ++ AF +   + R      T TFN ++  LC+ G+   A  L +++      PN VT+NT
Sbjct: 22  SAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNT 77

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I G C       AL +  EM  E G I  P+  TY ++I G CK G VD+A ++  +M 
Sbjct: 78  VIAGFCSRGRVQAALDIMREM-RERGGIA-PNQYTYGTVISGWCKVGRVDEAVKVFDEML 135

Query: 252 DRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
            +  + P  + YN+LI G+C       A      M++ GV   V T+N +++    DG+ 
Sbjct: 136 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 195

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
            +   L+E M  +G+ PD  TYN L++G C  G + +A E+F +M  +G R  V +Y  L
Sbjct: 196 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSL 255

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I A  K  +V++   L+ E +   IRP ++ YN L++     GN+  A +++ +M+   +
Sbjct: 256 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 315

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD  T+ T + GLC  G V EA ++   +     +  + TYN LI+G    G +K A +
Sbjct: 316 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 375

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           + + + +KG  P ++T + +I  LCK GQ D A +++ +M      P + T+ +L+ G  
Sbjct: 376 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 435

Query: 551 QNNKKS 556
             ++++
Sbjct: 436 TEDERA 441



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 209/407 (51%), Gaps = 9/407 (2%)

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
             TFN ++  LC       AL+L  +M        +P+ VTYN++I G C  G V  A +
Sbjct: 41  TTTFNIMLRHLCSAGKPARALELLRQM-------PRPNAVTYNTVIAGFCSRGRVQAALD 93

Query: 246 LLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINY 303
           ++ +M++R  I PN  TY ++I G+C V    EA  +F EM+  G V+P+ V +NA+I  
Sbjct: 94  IMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGG 153

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C  GK+D      + M++RGV     TYN L+    + GR + A EL   M  KG   D
Sbjct: 154 YCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPD 213

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V++YNILIN +CK+  V+ A+ ++  M    +R +V+TY +L+  L + G + +  KL D
Sbjct: 214 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFD 273

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +     + PD   +   I+    +G +  A ++   +   +      TYN L+ GLC +G
Sbjct: 274 EAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLG 333

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R+  A KL   +  +G  PD+VT +T+I     +G +  A  +  +M  K   P+ +T+ 
Sbjct: 334 RVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYN 393

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            L++G  +N +      ++ +M    +   D +  S +  L ++D++
Sbjct: 394 ALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 440



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 193/376 (51%), Gaps = 5/376 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMG 130
           +++  P P   ++  ++       +    + + + +    G+ P+ +    +I+  CK+G
Sbjct: 63  LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 122

Query: 131 ITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
               A  V   +L +    P  V +N LI G C +G++  A     ++        V T+
Sbjct: 123 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 182

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N L++ L        A +L EEM    G    PDV TYN +I+G CK+G V KA E+   
Sbjct: 183 NLLVHALFMDGRGTEAYELVEEM---GGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 239

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  R +   V+TY SLI         +E   LF E +  G++PD+V +NA+IN +   G 
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D+   ++  M ++ + PD VTYN+LM G CL+GR+  AR+L   M  +G + D+ +YN 
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 359

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LI+       V+DA+ +  EM+++   P+++TYN L+ GL + G   DA  ++ +M  N 
Sbjct: 360 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 419

Query: 430 VVPDSFTFATYIDGLC 445
           + PD  T+ + I+GL 
Sbjct: 420 ITPDDSTYISLIEGLT 435



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 151/278 (54%), Gaps = 3/278 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ + D M++   +  + ++ +L+  L  + +      L + +   GL PD+F  N+L
Sbjct: 161 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 220

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  CK G    A  +   + R       VT+  LI  L  +G++ E  +LF +      
Sbjct: 221 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 280

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++V +N LIN    + N   A ++  EM  +  A   PD VTYN+++ GLC  G VD+
Sbjct: 281 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA---PDDVTYNTLMRGLCLLGRVDE 337

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++L+ +M  R I P+++TYN+LI G+    D K+A  +  EMM+ G  P ++T+NA+I 
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
             CK+G+ D    +++ M++ G+ PD  TY SL++G  
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 435



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 176/357 (49%), Gaps = 11/357 (3%)

Query: 28  RPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMI-KMKPSPGMTSFTI 86
           R    +  ++ + +  GT I+ +     K G +  +EAV  FD M+ K +  P    +  
Sbjct: 96  REMRERGGIAPNQYTYGTVISGWC----KVGRV--DEAVKVFDEMLTKGEVKPEAVMYNA 149

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+       + DT +    R+   G+   +   NLL++ L   G  + A+ ++  +    
Sbjct: 150 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 209

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+  T+N LING C EG + +A  +F+ ++       VVT+ +LI  L +        
Sbjct: 210 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 269

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           KLF+E V       +PD+V YN++I+     G +D+A E++ +M+ + I P+ +TYN+L+
Sbjct: 270 KLFDEAVRRG---IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 326

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C +    EA+ L  EM   G+QPD+VT+N +I+     G +    R+   M+ +G N
Sbjct: 327 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 386

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA-NCKDQKVED 382
           P  +TYN+L+ G C  G+   A  +   MV  G   D  +Y  LI     +D++  D
Sbjct: 387 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAID 443


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 150/537 (27%), Positives = 244/537 (45%), Gaps = 96/537 (17%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC--------- 127
           P P    +  L+    +  + D V +L+K L   G  PD+F  NLL+  LC         
Sbjct: 106 PPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQ 165

Query: 128 ------------KMGITSGAFVVLGR------ILRSCFTPNTVTFNFLINGLCAEGRIME 169
                         GI +  +   GR      +L    + N V  N ++ G C EG + E
Sbjct: 166 RVFEAMPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEE 225

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG-AICKPDVVTYN 228
           A RL +++ V    PNVVTFN+ I+ LC+    L A ++F++M  ++   + +PD VT++
Sbjct: 226 AERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFD 285

Query: 229 SIIDGLCKDGFVDKAK-----------------------------------ELLLQMKDR 253
            ++ G C  GFVD+A+                                   ELL +M   
Sbjct: 286 VMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHE 345

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ-----PDVVTFNAMINYNCKDG 308
            I+PN  TYN ++ G C     KE K      ++N ++     PDVVT+ ++++  C  G
Sbjct: 346 RIHPNSYTYNIIVSGLC-----KEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKG 400

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            +   NR+L+ M Q+G  P++ TYN L+      GR + A  L   M  KG   D    N
Sbjct: 401 NIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCN 460

Query: 369 ILINANCKDQKVEDAVCLYREM-----------------------LSERIRPSVITYNTL 405
           I+I+  C++ K++ A+ +   M                       +S+R  P  ITY+ L
Sbjct: 461 IIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSIL 520

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           +S L + G   +A K + +M + D+ PDS  + T+I G CK+G    A++V + +    C
Sbjct: 521 ISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGC 580

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                TYN LI G  +  +     KL   ++ KG  P+V+T +++I   C++G + +
Sbjct: 581 NPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGMLTR 637



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 229/509 (44%), Gaps = 73/509 (14%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+  T N L+  LC  GR+  A R+F+ + V     N  +F  L  G CR   ++ ALK+
Sbjct: 143 PDVFTRNLLLRALCDAGRMELAQRVFEAMPVR----NEFSFGILARGYCRAGRSVDALKV 198

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            + M +    +C       N+++ G CK+G V++A+ L+ +M+ + + PNV+T+NS I  
Sbjct: 199 LDGMPSMNLVVC-------NTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISA 251

Query: 269 FCCVDDWKEAKCLFIEMMDNG----VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
            C      +A  +F +M ++      +PD VTF+ M++  C  G +D+   L+++M   G
Sbjct: 252 LCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGG 311

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
                 +YN  + G    GR+  A EL   M  +    + Y+YNI+++  CK+ K  DA 
Sbjct: 312 FLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDAR 371

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY---- 440
            +   + S  + P V+TY +LL      GN+  A +++D+M      P+SFT+       
Sbjct: 372 RVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSL 431

Query: 441 -------------------------------IDGLCKN-----------GFVLEAVQVFQ 458
                                          IDGLC+N           G   E      
Sbjct: 432 WRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALG 491

Query: 459 AIRNC------------KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            + N             +C     TY+ LI+ LCK GR   A K    +  K   PD V 
Sbjct: 492 RLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVI 551

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
             T IH  CK G+   A  +L DME K C PS  T+  L+RGF + +K  +++ L+ +M 
Sbjct: 552 YDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEME 611

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            + +  + L+ +S +     +    R CL
Sbjct: 612 EKGVSPNVLTYNSLIKSFCQQGMLTRPCL 640



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 242/540 (44%), Gaps = 57/540 (10%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGL-FPDLFV-LNLLINC--LCKMGIT 132
           P P  TSF   L        +    +L  RL+ + L FPD    L  L++C  +  + + 
Sbjct: 38  PPPRCTSFLARLV-----AAHPAAGALLPRLHRHILSFPDPCPHLLALLSCSDILPLRLA 92

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
             AF  L R L S   P T  +N LI     E R+     L+K L +    P+V T N L
Sbjct: 93  IPAFRSL-RALASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLL 151

Query: 193 INGLCRTRNTLVALKLFEEMV--NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           +  LC      +A ++FE M   NEF         ++  +  G C+ G    A ++L  M
Sbjct: 152 LRALCDAGRMELAQRVFEAMPVRNEF---------SFGILARGYCRAGRSVDALKVLDGM 202

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
              N+    +  N+++ GFC     +EA+ L   M   G+ P+VVTFN+ I+  CK G++
Sbjct: 203 PSMNL----VVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRV 258

Query: 311 DKVNRLLELM---IQRGV-NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
               R+ + M    Q G+  PD VT++ ++ GFC  G +  AR L   M   G    V S
Sbjct: 259 LDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVES 318

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN  ++   ++ +V +A  L REM  ERI P+  TYN ++SGL + G   DA ++ + ++
Sbjct: 319 YNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIR 378

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              + PD  T+ + +   C  G +  A ++   +    C     TYN L+  L + GR  
Sbjct: 379 SGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTT 438

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME--------------- 531
            A +L  R+  KG   D   C+ +I  LC+  ++D A  ++  M                
Sbjct: 439 EAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFL 498

Query: 532 --------AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
                   ++ C+P  +T+  L+    +  +  +    L +M     +V D+S  S + D
Sbjct: 499 SVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEM-----IVKDISPDSVIYD 553



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 62/129 (48%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D  I  +  P   +++IL++ L K  ++D        +    + PD  + +  I+  CK 
Sbjct: 503 DSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKH 562

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G TS A  VL  + +    P+T T+N LI G   + +  E  +L  ++      PNV+T+
Sbjct: 563 GKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTY 622

Query: 190 NTLINGLCR 198
           N+LI   C+
Sbjct: 623 NSLIKSFCQ 631


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 239/479 (49%), Gaps = 3/479 (0%)

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           K +++DT   +   +   G   +    N+LI  LC+ G    AF     +      P+  
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGF 293

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T+  LINGLC   R  EA  L  +++     PNVV +  LI+G  R  N   A K+ +EM
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           V    A  +P+ +TY++++ GLCK G +D+A  LL QM   +  P+ ITYN +I G    
Sbjct: 354 V---AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 410

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
              K+A  L  EM + G+ P+V T++ MI+  C+ G+ +K + LLE M  +G+ P+   Y
Sbjct: 411 HSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 470

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
             L+ G+C  G +S A E+F  M       D+Y YN LI    K  +VE++   + +M  
Sbjct: 471 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 530

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             + P+  TY+ L+ G  + G+L  A +L+ +M    + P+   +   ++   K+  + +
Sbjct: 531 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 590

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
               F+++ +    L    Y  LI+ L   G ++ A ++   ++  G +PDV   S++I 
Sbjct: 591 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLIS 650

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            LCK    +KA  +L +M  K   P+ V +  L+ G  ++   S    + + + A+ LV
Sbjct: 651 GLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 709



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 265/559 (47%), Gaps = 7/559 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG +    +N   KS    SNEA    D M   +  P +  +  L+    +    D    
Sbjct: 291 DGFTYGALINGLCKSRR--SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           + K + + G+ P+    + L+  LCKMG    A ++L +++R    P+T+T+N +I G  
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
                 +A RL  ++      PNV T++ +I+GLC++     A  L EEM  +     KP
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG---LKP 465

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +   Y  +I G C++G V  A E+  +M   N+ P++  YNSLI G   V   +E+   F
Sbjct: 466 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 525

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M + G+ P+  T++ +I+   K+G ++   +L++ M+  G+ P+ V Y  L++ +   
Sbjct: 526 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 585

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             I +    F SM+ +G   D   Y ILI+       +E A  +   +      P V  Y
Sbjct: 586 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVY 645

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           ++L+SGL +  +   A  ++D+M    V P+   +   IDGLCK+G +  A  VF +I  
Sbjct: 646 SSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILA 705

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                   TY  LI+G CK+G +  A  L++ +   G  PD    S +       G +++
Sbjct: 706 KGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQ 765

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A  L+ +M  +    S  +F  L+ GF +  K  + + LLH +    LV + L++ + ++
Sbjct: 766 AMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN-II 823

Query: 583 DLLSKDKKYRECLNQFRHL 601
             LS+  K  E    F  L
Sbjct: 824 SGLSEAGKLSEVHTIFVEL 842



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 172/652 (26%), Positives = 286/652 (43%), Gaps = 64/652 (9%)

Query: 1   MVFKSSHRSFS-----LASKA----GYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFL 51
           +V  S HR+ S      A  A    GY    W   GR      D  S H    + + + +
Sbjct: 157 VVLASIHRALSDSGHPFAGGARRPRGYLQEVWEGAGRRGGRPDDERSGHGSQHSVLQRAV 216

Query: 52  NDRHKSGNITSNEAVY----FFDC----MIKMKPSP-GMTSFT--ILLTMLAKNKQYDTV 100
                 G   S    Y     FD     +++M+    G+ + T  +L+  L ++   +  
Sbjct: 217 EGSAARGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 276

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
               K +   GL PD F    LIN LCK   ++ A  +L  +  +   PN V +  LI+G
Sbjct: 277 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 336

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
              EG   EA ++ K++      PN +T++ L+ GLC+      A  L ++MV +     
Sbjct: 337 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS---H 393

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           +PD +TYN II+G  +      A  LL +M++  I+PNV TY+ +I G C   + ++A  
Sbjct: 394 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 453

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L  EM   G++P+   +  +I+  C++G +     + + M +  V PD   YNSL+ G  
Sbjct: 454 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 513

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
            VGR+  + + F  M  +G   + ++Y+ LI+   K+  +E A  L + ML   ++P+ +
Sbjct: 514 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDV 573

Query: 401 TYNTLLSGLFQ-----------------------------------VGNLGDALKLIDKM 425
            Y  LL   F+                                    GN+  A +++  +
Sbjct: 574 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI 633

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           + N  VPD   +++ I GLCK     +A  +   +     +  I  YN LI+GLCK G +
Sbjct: 634 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 693

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A  +F+ +  KG +P+ VT +++I   CK G +  A  L  +M A    P    +  L
Sbjct: 694 SYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVL 753

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS--KVVDLLSKDKKYRECL 595
             G        + + L+ +M     +    S+SS   +VD   K  K +E L
Sbjct: 754 TTGCSSAGDLEQAMFLIEEM----FLRGHASISSFNNLVDGFCKRGKMQETL 801



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/544 (25%), Positives = 257/544 (47%), Gaps = 45/544 (8%)

Query: 48  AKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL 107
           A  ++   + GN  ++EA      M+     P   ++  L+  L K  Q D    L K++
Sbjct: 331 ANLIDGFMREGN--ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 388

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
             +   PD    NL+I    +      AF +L  +  +  +PN  T++ +I+GLC  G  
Sbjct: 389 VRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 448

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM--VNEFGAICKPDVV 225
            +A+ L +++      PN   +  LI+G CR  N  +A ++F++M  VN       PD+ 
Sbjct: 449 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL-----PDLY 503

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
            YNS+I GL K G V+++ +   QM++R + PN  TY+ LI G+    D + A+ L   M
Sbjct: 504 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 563

Query: 286 MDNGVQP-DVV-------------------TFNAMINYN---------------CKDGKM 310
           +D G++P DV+                   TF +M++                    G M
Sbjct: 564 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 623

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           +   R+L  + + G  PD   Y+SL+ G C      +A  +   M  KG   ++  YN L
Sbjct: 624 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 683

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+  CK   +  A  ++  +L++ + P+ +TY +L+ G  +VG++ +A  L ++M    +
Sbjct: 684 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 743

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            PD+F ++    G    G + +A+ + + +   +    I ++N L++G CK G+++   K
Sbjct: 744 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF-LRGHASISSFNNLVDGFCKRGKMQETLK 802

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L H +  +G +P+ +T   +I  L + G++ + + + ++++ K    +   F +L    +
Sbjct: 803 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 862

Query: 551 QNNK 554
              K
Sbjct: 863 NQGK 866



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 140/327 (42%), Gaps = 53/327 (16%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + IL+  L+ +   +    +   +  NG  PD+ V + LI+ LCK      AF +L  + 
Sbjct: 610 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 669

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           +    PN V +N LI+GLC  G I  A  +F  +      PN VT+ +LI+G C+  +  
Sbjct: 670 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 729

Query: 204 VALKLFEEM-------------------------------VNEFGAICKPDVVTYNSIID 232
            A  L+ EM                               + E        + ++N+++D
Sbjct: 730 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVD 789

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE-------- 284
           G CK G + +  +LL  +  R + PN +T  ++I G        E   +F+E        
Sbjct: 790 GFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSES 849

Query: 285 -----------MMDNGVQP-DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                      M++ G  P DVV  + MI  +CK+G +DK   L ++++ +       +Y
Sbjct: 850 AARHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 907

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKG 359
            +++D  C  G++S A  L   M  +G
Sbjct: 908 LAIVDNLCRKGKLSEALNLLKEMDKRG 934


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 232/475 (48%), Gaps = 13/475 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +S + +++ A +  D +    P P  ++F  LL  LA+      +  LF  +    + P+
Sbjct: 112 RSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPN 171

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRI--LRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           +    +L+  LCK G    A  VL  +    S   P+ V  N +++GLC  GR+ +A + 
Sbjct: 172 VVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKF 231

Query: 174 FKKL--NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
            ++   +V  C PN VT+N L +  CR  N  +A +L  +M  E      P+ VT N+I+
Sbjct: 232 VEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKER---VTPNAVTLNTIV 288

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINP----NVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
            GLC  G V  A E   +   R + P    N +TY++L+  F   ++   A  LF EM+D
Sbjct: 289 GGLCWVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVD 346

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G  PD + +  MI+   + G++D    +   M + G   D   YN L+ GFC   R++ 
Sbjct: 347 EGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNE 406

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A EL   M   G + DVY+YN L++  CK         L  +M+    RPSV+T+ TL+ 
Sbjct: 407 AYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIH 466

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G  +VG + +AL++   M  + + P++  + T ID LCK+     A+++F  +R      
Sbjct: 467 GYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPA 526

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
            + T+N L+ GL      + A +L   ++     PD VT   ++ WL   G+ D+
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDR 581



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 231/482 (47%), Gaps = 18/482 (3%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKR--LNSNGLFPDLFVLNLLINCLCKMGITSG 134
           PSP + S  +L  +L+++       + F R  L +    PD    N L++ L + G   G
Sbjct: 97  PSPRILS-ALLYKILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPG 155

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD--PNVVTFNTL 192
              +   +  +   PN VT+  L+ GLC  GR+ +A  +   ++    D  P+VV  N +
Sbjct: 156 MTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNI 215

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           ++GLC+T     A+K  EE +      C P+ VTYN +    C+ G V  A EL+ +M+ 
Sbjct: 216 VDGLCKTGRLQQAVKFVEERMRSVHG-CAPNTVTYNCLAHAFCRAGNVGMACELVAKMEK 274

Query: 253 RNINPNVITYNSLICGFCCV-------DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
             + PN +T N+++ G C V       + ++E + ++ E   N      VT++ ++    
Sbjct: 275 ERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGN-----AVTYSTLVGAFL 329

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
               +     L   M+  G +PD + Y +++ G    GR+  A  +  SM   G + D  
Sbjct: 330 HTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAK 389

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +YNILI   C+ +++ +A  L  EM    ++P V TYNTLLSGL + G+     +L+ KM
Sbjct: 390 AYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKM 449

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
                 P   TF T I G CK G + EA+++F+++     +     YN LI+ LCK    
Sbjct: 450 IDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDT 509

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +LF  ++ K    +V T + ++  L  +   +KA +L+  M    C P  VT   L
Sbjct: 510 SLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDIL 569

Query: 546 LR 547
           + 
Sbjct: 570 ME 571



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 207/425 (48%), Gaps = 13/425 (3%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+T  FN L++ L   G +    +LF  +   +  PNVVT+  L+ GLC+      AL +
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN---PNVITYNSL 265
            + M      +C PDVV  N+I+DGLCK G + +A + + + + R+++   PN +TYN L
Sbjct: 195 LDGMSGPESDVC-PDVVMLNNIVDGLCKTGRLQQAVKFV-EERMRSVHGCAPNTVTYNCL 252

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ-RG 324
              FC   +   A  L  +M    V P+ VT N ++   C  G+   V   LE   + R 
Sbjct: 253 AHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGR---VGAALEFFREKRT 309

Query: 325 VNPDT----VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           V P+     VTY++L+  F     +  A ELF  MV +G   D   Y  +I+   +  ++
Sbjct: 310 VWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRL 369

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           +DA  +   M     +     YN L+ G  +   L +A +L+ +M+   + PD +T+ T 
Sbjct: 370 DDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTL 429

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           + GLCK G  L   ++   + +  C   + T+  LI+G CK+G++  A ++F  +   G 
Sbjct: 430 LSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGI 489

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P+ V  +T+I +LCK      A +L  +M  K+   +  TF  LL+G    N   K   
Sbjct: 490 QPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFE 549

Query: 561 LLHKM 565
           L+  M
Sbjct: 550 LMDLM 554



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 204/415 (49%), Gaps = 11/415 (2%)

Query: 169 EAARLFK-KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
           +AAR  +  L   A  P+   FNTL++ L +  +     +LF  M +   A  +P+VVTY
Sbjct: 119 DAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRD---ASVRPNVVTY 175

Query: 228 NSIIDGLCKDGFVDKAKELLLQMK--DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
             ++ GLCK G V  A  +L  M   + ++ P+V+  N+++ G C     ++A     E 
Sbjct: 176 GILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEER 235

Query: 286 MD--NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           M   +G  P+ VT+N + +  C+ G +     L+  M +  V P+ VT N+++ G C VG
Sbjct: 236 MRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVG 295

Query: 344 RISRARELFVS--MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           R+  A E F     V    R +  +Y+ L+ A      V  A+ L+ EM+ E   P  I 
Sbjct: 296 RVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIM 355

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y T++SGL Q G L DA  +   M+      D+  +   I G C+   + EA ++   ++
Sbjct: 356 YFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMK 415

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +  + TYN L++GLCK G      +L  ++   G  P VVT  T+IH  CK GQ+D
Sbjct: 416 EAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQID 475

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +A  +   M+     P+ V + TL+    ++   S  + L  +M  EK V ++++
Sbjct: 476 EALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEM-REKHVPANVT 529


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 242/480 (50%), Gaps = 9/480 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           LL++LA     D  V    R+    + P+    N ++ CL +   +  A+    R+    
Sbjct: 134 LLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAW----RLFEQL 189

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             PN  TFN +I+ LC EG + EA  L  ++    C P+VVT+N+LI+G  +       L
Sbjct: 190 PAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGE----L 245

Query: 207 KLFEEMVNEF-GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
           +  E++V E  G  C+PDVVTYN++++  CK G +++A     +MK   +  NV+T+++ 
Sbjct: 246 EEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTF 305

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           +  FC     +EA  LF +M   G++P+ VT+  +++  CK G++D    L   M+Q+GV
Sbjct: 306 VDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGV 365

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             + VTY  L+DG C  G+++ A ++F  M   G R +   Y  LI+ +   +  E A+ 
Sbjct: 366 PLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALS 425

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L  EM  + +   V  Y  L+ GL  +  L +A  L++KM    + P++  +   +D   
Sbjct: 426 LLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACF 485

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K     EA+ + Q + +      I TY  L++GLCK G +  A   F+++   G  P+V 
Sbjct: 486 KARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQ 545

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             + ++  LCK G++DKA  LL +M  K      V   +L+ G ++         L  KM
Sbjct: 546 AYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKM 605



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 161/545 (29%), Positives = 258/545 (47%), Gaps = 34/545 (6%)

Query: 44  GTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL 103
           GT+ A  ++DR +   + S +AV   D ++   P P      +   +LA+ + +    SL
Sbjct: 37  GTTAATPISDRLRL--LHSLQAVPA-DHLLS-HPLPSSAHLCLAAHILARARLFPHSRSL 92

Query: 104 FKRLNSNGLFPDLF-----------------------VLNLLINCLCKMGITSGAFVVLG 140
             RL + G  P L                        V++ L++ L   G+   A + L 
Sbjct: 93  LSRLLAPGHHPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLDDAVLALA 152

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           R+      PNT T N ++  L  E     A RLF++L      PNV TFN +I+ LC+  
Sbjct: 153 RVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEG 208

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           +   A  L   M    G  C PDVVTYNS+IDG  K G +++ ++L+ +M+     P+V+
Sbjct: 209 DLAEARALLARM-KAIG--CSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVV 265

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TYN+L+  FC     + A   F EM   GV  +VVTF+  ++  CK+G + +  +L   M
Sbjct: 266 TYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQM 325

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
             +G+ P+ VTY  L+DG C  GR+  A  L   MV +G   +V +Y +L++  CK+ KV
Sbjct: 326 RMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKV 385

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
            +A  ++R M    IR + + Y TL+ G F   N   AL L+ +M+   +  D   +   
Sbjct: 386 AEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGAL 445

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I GLC    + EA  +   +  C  +     Y  +++   K  +   A  L  ++   G 
Sbjct: 446 IWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGF 505

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P++VT   ++  LCK G +D+A      M      P+   +  L+ G  +N +  K V+
Sbjct: 506 RPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVL 565

Query: 561 LLHKM 565
           LL +M
Sbjct: 566 LLDEM 570



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 233/477 (48%), Gaps = 5/477 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G++   EA      M  +  SP + ++  L+    K  + + V  L   +   G  PD
Sbjct: 206 KEGDLA--EARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPD 263

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N L+NC CK G    A+     + R     N VTF+  ++  C  G + EA +LF 
Sbjct: 264 VVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFA 323

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++ +    PN VT+  L++G C+      AL L  EMV +   +   +VVTY  ++DGLC
Sbjct: 324 QMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPL---NVVTYTVLVDGLC 380

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G V +A+++   M+   I  N + Y +LI G     + + A  L  EM D G++ DV 
Sbjct: 381 KEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVS 440

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            + A+I   C   K+D+   LL  M + G+ P+ V Y ++MD      + S A  L   M
Sbjct: 441 LYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKM 500

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +  G R ++ +Y  L++  CK   +++A+  + +M+   + P+V  Y  L+ GL + G L
Sbjct: 501 MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRL 560

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             A+ L+D+M    +  D+    + +DG  K G + +A  +   + N   +L +  Y C 
Sbjct: 561 DKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCF 620

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           + G C +  ++ A ++   +   G  PD V  + +I+   K G M++A  L  +ME+
Sbjct: 621 VWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMES 677



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 196/411 (47%), Gaps = 11/411 (2%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFKDGT-----SIAKFLNDRHKSGNITSNEAVYFFDCMIKM 75
           N +C FGR     +  +    ++G      + + F++   K+G +   EA+  F  M   
Sbjct: 272 NCFCKFGRMERAYSYFAEMK-REGVMANVVTFSTFVDAFCKNGMV--REAMKLFAQMRMK 328

Query: 76  KPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
              P   ++T L+    K  + D  + L   +   G+  ++    +L++ LCK G  + A
Sbjct: 329 GMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEA 388

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             V   + R+    N + +  LI+G         A  L  ++     + +V  +  LI G
Sbjct: 389 EDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWG 448

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           LC  +    A  L  +M +E G   KP+ V Y +I+D   K     +A  LL +M D   
Sbjct: 449 LCNLQKLDEAKSLLNKM-DECG--LKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGF 505

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PN++TY +L+ G C      EA   F +M+D G++P+V  + A+++  CK+G++DK   
Sbjct: 506 RPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVL 565

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           LL+ MI +G++ D V   SLMDG    G +  A  L   M++ G + D+Y Y   +   C
Sbjct: 566 LLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFC 625

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
               +++A  +  EM+   I P  + YN L++   ++GN+ +A  L ++M+
Sbjct: 626 NLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 143/287 (49%), Gaps = 24/287 (8%)

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
           V+ LL L+  RG+  D V              ++R REL V   ++ C H       ++ 
Sbjct: 131 VDTLLSLLADRGLLDDAVLA------------LARVRELRVPPNTRTCNH-------ILL 171

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
              +++  E A  L+ ++ +    P+V T+N ++  L + G+L +A  L+ +M+     P
Sbjct: 172 CLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSP 227

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D  T+ + IDG  K G + E  ++   +R C C   + TYN L+N  CK GR++ A   F
Sbjct: 228 DVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYF 287

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             ++ +G + +VVT ST +   CK G + +A  L   M  K   P+EVT+  L+ G  + 
Sbjct: 288 AEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKA 347

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
            +    +VL ++M  + + ++ ++ +  +VD L K+ K  E  + FR
Sbjct: 348 GRLDDALVLTNEMVQQGVPLNVVTYTV-LVDGLCKEGKVAEAEDVFR 393


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 153/588 (26%), Positives = 264/588 (44%), Gaps = 77/588 (13%)

Query: 42  KDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVV 101
           + G   AK      +       +A   FD ++K      +      L+ +A+       +
Sbjct: 23  QGGRGGAKRTKQGGRQRATEPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASPA-VAI 81

Query: 102 SLFKRLNSNGL---FPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF--TPNTVTFNF 156
           SLF R+   G     P++    ++I C  ++G    AF  +GR++ +     PN +  + 
Sbjct: 82  SLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSS 141

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
                 A GR M    + +++    C P++ ++  L+ GLC  + +  AL L   M +  
Sbjct: 142 QGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHK 201

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC--------- 267
           G  C  DVV Y ++I+GL ++G +DKA  L   M DR  +P+V+TY+S+I          
Sbjct: 202 GR-CPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMD 260

Query: 268 --------------------------GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
                                     G+C     KEA  +F +M  +GV+PDVVT+ A++
Sbjct: 261 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALM 320

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +Y CK+GK  +  ++ + +++RG  PD+ TY +L+ G+   G +    +L   M+ KG +
Sbjct: 321 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQ 380

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
              + +N+++ A  K  KV++A+ ++  M  + + P ++ Y T+L  L   G + DAL  
Sbjct: 381 LGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQ 440

Query: 422 IDKMQLNDVVPDSFTFATYIDGLC-----------------------------------K 446
            + ++   + P+   F T I GLC                                   K
Sbjct: 441 FNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCK 500

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G V+EA  +F  +     E    TYN LI+G C  G++  A KL   +   G  P  VT
Sbjct: 501 KGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVT 560

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            +T+I+   + G+++    LL +M+ K   P  VT+  LL+G  Q  +
Sbjct: 561 YNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGR 608



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 203/402 (50%), Gaps = 34/402 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   FD M+   PSP + +++ +++ L+K +  D    +F R+  NG+ PD  +   L
Sbjct: 225 DKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL 284

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C  G    A  +  ++ R    P+ VT+  L++ LC  G+  EA ++F  L     
Sbjct: 285 VHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH 344

Query: 183 DPNVVTFNTLINGLCRTRNTLVALK-LFEEMVNE------------FGAICK-------- 221
            P+  T+ TL++G   T   LV +  L + M+ +             GA  K        
Sbjct: 345 KPDSTTYGTLLHGYA-TEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEAL 403

Query: 222 ------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                       PD+V Y +++D LC  G VD A      +K   + PN++ + +LI G 
Sbjct: 404 LVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGL 463

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C  D W + + L  EM+D G+  D + FNA++   CK G++ +   L +LM++ G+ P+T
Sbjct: 464 CTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNT 523

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            TYN+L+DG+CL G++  A +L   MV  G +    +YN +IN   ++ ++ED + L RE
Sbjct: 524 NTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLRE 583

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           M  + + P ++TY  LL GLFQ G    A +L  +M   D V
Sbjct: 584 MDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWDTV 625



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 204/415 (49%), Gaps = 3/415 (0%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++T ++  L +  Q D   SLF  +   G  PD+   + +I+ L K      A  V  
Sbjct: 208 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 267

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           R++++   P+ + +  L++G C+ G+  EA  +FKK+     +P+VVT+  L++ LC+  
Sbjct: 268 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNG 327

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            +  A K+F+ +V       KPD  TY +++ G   +G + +  +LL  M  + +     
Sbjct: 328 KSTEARKIFDSLVKRG---HKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHH 384

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            +N ++  +   +   EA  +F  M   G+ PD+V +  +++  C  G++D        +
Sbjct: 385 IFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSL 444

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
              G+ P+ V + +L+ G C   +  +  EL   M+ +G   D   +N ++   CK  +V
Sbjct: 445 KSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRV 504

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
            +A  L+  M+   I P+  TYNTL+ G    G + +A+KL+  M  N V P   T+ T 
Sbjct: 505 IEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTI 564

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           I+G  +NG + + + + + +        I TY  L+ GL + GR   A +L+ R+
Sbjct: 565 INGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 191/437 (43%), Gaps = 42/437 (9%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A ++F +L       ++   N  ++ + R  +  VA+ LF  M         P++ TY 
Sbjct: 45  DAHQVFDRLLKRGDRASIFDLNRALSDVARA-SPAVAISLFNRMPRAGATSAAPNIATYG 103

Query: 229 SIIDGLCK--------------------------------------DGFVDKAKELLLQM 250
            +I G C+                                       G   +   +L +M
Sbjct: 104 IVI-GCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLRRM 162

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQP-DVVTFNAMINYNCKDG 308
            +    P++ +Y  L+ G C     ++A  L   M D+ G  P DVV +  +IN   ++G
Sbjct: 163 PELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREG 222

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++DK   L + M+ RG +PD VTY+S++        + +A ++F  MV  G   D   Y 
Sbjct: 223 QLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYT 282

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L++  C   K ++A+ ++++M    + P V+TY  L+  L + G   +A K+ D +   
Sbjct: 283 SLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKR 342

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
              PDS T+ T + G    G ++E   +   +     +L    +N ++    K  ++  A
Sbjct: 343 GHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEA 402

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             +F  ++ +G  PD+V   T++  LC  G++D A      ++++   P+ V F TL+ G
Sbjct: 403 LLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHG 462

Query: 549 FVQNNKKSKVVVLLHKM 565
               +K  KV  L  +M
Sbjct: 463 LCTCDKWDKVEELAFEM 479


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 251/513 (48%), Gaps = 27/513 (5%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI-NCLCKMGITSGAFV 137
           P    +T +++ L +   ++  +    R+ ++   P++    +L+  CL K  +     +
Sbjct: 40  PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   I   C+ P+   FN L++  C  G    A +L KK+    C P  V +N LI G+C
Sbjct: 100 LSMMITEGCY-PSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGIC 158

Query: 198 RTRNTL-----VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
            +         +A K + EM+     + K ++  ++     LC  G  +KA  ++ +M  
Sbjct: 159 SSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRC---LCGIGKFEKAYNVIREMMS 215

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           +   P+  TY+ +I   C     ++A  LF EM  NG+ PDV  +  +I+  CK G +++
Sbjct: 216 KGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQ 275

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
                + M + G  P+ VTY +L+  +    ++S+A E++  M+SKGC  ++ +Y  LI+
Sbjct: 276 ARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALID 335

Query: 373 ANCKDQKVEDAVCLYREMLSERIR-----------------PSVITYNTLLSGLFQVGNL 415
             CK  K+E A  +Y+ M  E +                  P+V TY  L+ GL +   +
Sbjct: 336 GLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQV 395

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A  L+  M +    P+   +   IDG CK G + EA +VF  +  C  +  + TY+ L
Sbjct: 396 KEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSL 455

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+ L K  RL  A K+  ++      P+VV  + MI  LCK G+ D+A  L++ ME K C
Sbjct: 456 IDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGC 515

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            P+ VT+  ++ GF ++ +  K + LL +M+++
Sbjct: 516 NPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSK 548



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 243/500 (48%), Gaps = 18/500 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  ++++ ++  L    + +    LF+ +  NG+ PD++V   LI+  CK G    A   
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNW 279

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              + R    PN VT+  LI+      ++ +A  +++ +    C PN+VT+  LI+GLC+
Sbjct: 280 FDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCK 339

Query: 199 TRNTLVALKLFEEMVNEF--------------GAICKPDVVTYNSIIDGLCKDGFVDKAK 244
                 A ++++ M  E               GA  +P+V TY +++DGLCK   V +A+
Sbjct: 340 AGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEAR 399

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +LL  M      PN + Y++LI G C      EA+ +F  M++ G  P+V T++++I+  
Sbjct: 400 DLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRL 459

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            KD ++D   ++L  M++    P+ V Y  ++DG C VG+   A +L V M  KGC  +V
Sbjct: 460 FKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNV 519

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y  +I+   K  +VE  + L ++M S+   P+ +TY  L++     G L +A KL+++
Sbjct: 520 VTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEE 579

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+          +   I+G  +  F+      F+   N    +    Y  LI+   K GR
Sbjct: 580 MKQTYWPRHVAGYRKVIEGFNRE-FIASLYLSFEISENDSVPV-APVYRVLIDNFIKAGR 637

Query: 485 LKTACKLFHRLQHKGPI--PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           L+ A +L   L    P    +     T+I  L    + DKA +L  DM ++  +P     
Sbjct: 638 LEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSIL 697

Query: 543 CTLLRGFVQNNKKSKVVVLL 562
             L++G ++ N+  + + LL
Sbjct: 698 VHLIKGLLRVNRWEEALQLL 717



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 192/424 (45%), Gaps = 61/424 (14%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF-- 113
           KS  ++    VY  + M+    +P + ++T L+  L K  + +    ++K +    +   
Sbjct: 304 KSRKVSKANEVY--EMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIP 361

Query: 114 ---------------PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLI 158
                          P++F    L++ LCK      A  +L  +      PN V ++ LI
Sbjct: 362 DVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALI 421

Query: 159 NGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
           +G C  G++ EA  +F  +     DPNV T+++LI+ L + +   +ALK+  +M+     
Sbjct: 422 DGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENS-- 479

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
            C P+VV Y  +IDGLCK G  D+A +L++ M+++  NPNV+TY ++I GF      +  
Sbjct: 480 -CAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFG--KSGRVE 536

Query: 279 KCLFI--EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ-------------- 322
           KCL +  +M   G  P+ VT+  +IN+ C  G +D+ ++LLE M Q              
Sbjct: 537 KCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVI 596

Query: 323 RGVN-------------------PDTVTYNSLMDGFCLVGRISRAREL--FVSMVSKGCR 361
            G N                   P    Y  L+D F   GR+  A EL   +S  S    
Sbjct: 597 EGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSA 656

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +   +  LI       K + A  LY +M+S    P +     L+ GL +V    +AL+L
Sbjct: 657 ANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQL 716

Query: 422 IDKM 425
           +D +
Sbjct: 717 LDSI 720



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 141/346 (40%), Gaps = 44/346 (12%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M   G + D  T     +  CK GK  +   LLE   +    PDTV Y  ++ G C    
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLE---KEEFVPDTVLYTKMISGLCEASL 57

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
              A +    M +  C  +V +Y IL+      +K+     +   M++E   PS   +N+
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN---------------GF 449
           L+    + G+   A KL+ KM      P    +   I G+C +               G 
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 450 VLEAVQVFQAI-----RNCKCEL--------------------RIETYNCLINGLCKMGR 484
           +LEA  V   +       C C +                       TY+ +I  LC   +
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           ++ A +LF  ++  G  PDV   +T+I   CK G +++A +   +ME   C P+ VT+  
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           L+  ++++ K SK    +++M   K    ++   + ++D L K  K
Sbjct: 298 LIHAYLKSRKVSKANE-VYEMMLSKGCTPNIVTYTALIDGLCKAGK 342


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 219/435 (50%), Gaps = 4/435 (0%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +   G+ PD      L+   C+ G       +L  + R  F+ +  T   ++  LC
Sbjct: 168 VFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLC 227

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            +GR  + +  F+++      PNVV +   I+GLC+ R    A  + EEMV   G   KP
Sbjct: 228 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMV---GRGLKP 284

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           +V T+ ++IDGLCK G+ ++A  L L++ K  +  PNV TY  +I G+C       A+ L
Sbjct: 285 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 344

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
            + M++ G++P+  T+  +I  +CK G  D+   L+  M Q G  P+  TYN+++DGFC 
Sbjct: 345 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 404

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G+I  A ++     S+G + D  +Y ILI  +CK   +  A+ L+  M+     P +  
Sbjct: 405 KGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEA 464

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y +L+S   Q   + ++ K  DK  +  ++P   T+ + I G CK G    A++VF+ + 
Sbjct: 465 YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMV 524

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
              C     TY  LI+GLCK  RL+ A  L+  +  K  +P  VT  T+    C+  +  
Sbjct: 525 QNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTS 584

Query: 522 KANDLLLDMEAKNCV 536
            A  +L  ++ +  V
Sbjct: 585 IAVSVLDRLDKRQQV 599



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 229/453 (50%), Gaps = 8/453 (1%)

Query: 124 NCLCKMGITSGAFVVLGRIL----RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N + ++G+ +G+FV   ++     R+   P+  +F  L+   C EG++ E   L   +  
Sbjct: 150 NWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWR 209

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
           +    +  T   ++  LC         + F  M+ E G    P+VV Y + IDGLCK  +
Sbjct: 210 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML-ETGT--PPNVVNYTAWIDGLCKRRY 266

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM-DNGVQPDVVTFN 298
           V +A  +L +M  R + PNV T+ +LI G C +   + A  LF++++  +  +P+V T+ 
Sbjct: 267 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 326

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            MI   C++GK+ +   LL  M+++G+ P+T TY +L+ G C  G   RA EL   M  +
Sbjct: 327 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQE 386

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   ++Y+YN +I+  CK  K+++A  + R   S+ ++   ITY  L++   + G++  A
Sbjct: 387 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 446

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           L L D+M  N   PD   + + I   C+   + E+ + F            +TY  +I G
Sbjct: 447 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 506

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK+GR   A ++F R+   G   D +T   +I  LCKE ++++A  L   M  K  VP 
Sbjct: 507 YCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPC 566

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           EVT  TL   + +  K S  V +L ++   + V
Sbjct: 567 EVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQV 599



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 238/489 (48%), Gaps = 11/489 (2%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD M +    P   SF  L+ +  +  + + V +L   +   G   D     +++  LC+
Sbjct: 169 FDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCE 228

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G          R+L +   PN V +   I+GLC    + +A  + +++      PNV T
Sbjct: 229 KGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 288

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
             TLI+GLC+   T  A +LF +++    +  KP+V TY  +I G C++G + +A+ LL+
Sbjct: 289 HTTLIDGLCKIGWTERAFRLFLKLIKS--SSYKPNVHTYTVMIGGYCREGKLARAEMLLV 346

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M ++ + PN  TY +LI G C    +  A  L  +M   G  P++ T+NA+I+  CK G
Sbjct: 347 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 406

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           K+ +  ++L +   +G+  D +TY  L+   C  G I+ A +LF  MV  GC  D+ +Y 
Sbjct: 407 KIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYT 466

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI+  C+ +++E++   + + L   + P+  TY ++++G  +VG    AL++ ++M  N
Sbjct: 467 SLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQN 526

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI---RNCKCELRIETYNCLINGLCKMGRL 485
               DS T+   I GLCK   + EA  +++ +   R   CE+   T   L    C+  + 
Sbjct: 527 GCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEV---TRVTLTFEYCRREKT 583

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A  +  RL  +     V T   ++  L   G +D A+  L  +  ++      T+   
Sbjct: 584 SIAVSVLDRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGF 640

Query: 546 LRGFVQNNK 554
           +    +NN+
Sbjct: 641 INSCYENNR 649



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/452 (23%), Positives = 191/452 (42%), Gaps = 53/452 (11%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
           F+RL S    PDL  L  L        +  G+  +   ++R            ++     
Sbjct: 78  FRRLASR---PDLRRLMRLYVTAATAFVARGSLPMAHEVMRG-----------MVAAFGE 123

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
            GR+ EAA +  ++        V T N ++     T + + A K+F+ M      +C PD
Sbjct: 124 AGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR--AGVC-PD 180

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
             ++ +++   C++G V++   LL  M                        W+       
Sbjct: 181 ERSFRALVVVCCREGKVEEVDALLAAM------------------------WR------- 209

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
                G   D  T   ++   C+ G+   V+     M++ G  P+ V Y + +DG C   
Sbjct: 210 ----YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRR 265

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML-SERIRPSVITY 402
            + +A  +   MV +G + +VY++  LI+  CK    E A  L+ +++ S   +P+V TY
Sbjct: 266 YVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTY 325

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
             ++ G  + G L  A  L+ +M    + P++ T+ T I G CK G    A ++   ++ 
Sbjct: 326 TVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQ 385

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 I TYN +I+G CK G+++ A K+      +G   D +T + +I   CK+G +  
Sbjct: 386 EGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITY 445

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           A DL   M    C P    + +L+  + Q  +
Sbjct: 446 ALDLFDRMVENGCCPDIEAYTSLISTYCQQRQ 477



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 148/309 (47%), Gaps = 1/309 (0%)

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             ++  F       EA  + +EM  +G+   V T N ++    + G      ++ + M +
Sbjct: 115 RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 174

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            GV PD  ++ +L+   C  G++     L  +M   G   D  +  +++ + C+  + +D
Sbjct: 175 AGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 234

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
               +R ML     P+V+ Y   + GL +   +  A  ++++M    + P+ +T  T ID
Sbjct: 235 VSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 294

Query: 443 GLCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           GLCK G+   A ++F + I++   +  + TY  +I G C+ G+L  A  L  R+  +G  
Sbjct: 295 GLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLK 354

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P+  T +T+I   CK G  D+A +L+  M+ +  +P+  T+  ++ GF +  K  +   +
Sbjct: 355 PNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 414

Query: 562 LHKMAAEKL 570
           L    ++ L
Sbjct: 415 LRMATSQGL 423



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 165/347 (47%), Gaps = 8/347 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++T+++    +  +      L  R+   GL P+      LI   CK G    AF +
Sbjct: 320 PNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFEL 379

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           + ++ +  F PN  T+N +I+G C +G+I EA ++ +         + +T+  LI   C+
Sbjct: 380 MNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCK 439

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   AL LF+ MV E G  C PD+  Y S+I   C+   ++++++   +     + P 
Sbjct: 440 QGHITYALDLFDRMV-ENG--CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPT 496

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             TY S+I G+C V     A  +F  M+ NG   D +T+ A+I+  CK+ ++++   L E
Sbjct: 497 KQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYE 556

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-GCRHDVYSYNILINANCKD 377
            M+ + + P  VT  +L   +C   + S A    VS++ +   R  V++ ++++      
Sbjct: 557 GMLDKRLVPCEVTRVTLTFEYCRREKTSIA----VSVLDRLDKRQQVHTVDVVVRKLSAL 612

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             V+ A    +++L E       TY   ++  ++      A ++ +K
Sbjct: 613 GDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEMSEK 659



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 8/224 (3%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    + +  K G+IT   A+  FD M++    P + ++T L++   + +Q +    
Sbjct: 426 DKITYTILITEHCKQGHITY--ALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQK 483

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            F +    GL P       +I   CK+G ++ A  V  R++++    +++T+  LI+GLC
Sbjct: 484 FFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLC 543

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            E R+ EA  L++ +      P  VT  TL    CR   T +A+ + + +        + 
Sbjct: 544 KESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK------RQ 597

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            V T + ++  L   G VD A   L ++ D +   +  TY   I
Sbjct: 598 QVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI 641


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 219/408 (53%), Gaps = 6/408 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+T + N L+ GL    R+  A + F+        P++ TFNT+I+GLCR      A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE---LLLQMKDRNINPNVITYNSL 265
            ++ +  +G    P V TYNS+IDG CK G          LL +M +  I+P  +T+  L
Sbjct: 214 AKD-IKAWG--LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G+C   +   A  +F EM   G+   VVT+N++I+  C +GK+++  +L+E M   G+
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
           +P+ +T+  ++ GFC  G ++ A +    M  +    DV  YNILI+   +  K+EDA+ 
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           +   M  + I P+V TYN L++G  + G+   A  L+D+M+   +  D  T+   I  LC
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
             G V +AV++   +     E    TYN +I G C  G +K+A ++  R++      +VV
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           T +  I + C+ G+MD+ANDLL +M  K  VP+ +T+ T+  G ++  
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 212/448 (47%), Gaps = 46/448 (10%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  +S   LL  L   K+ D     F+      + PD++  N +I+ LC++G    A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 139 LGRILRSCFTPNTVTFNFLINGLC---AEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
              I      P+  T+N LI+G C     G +     L K++      P  VTF  LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            C+  NT  A+++FEEM  +  A     VVTYNS+I GLC +G V++  +L+ +M+D  +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAA---SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           +PN IT+  ++ GFC      +A      M +  V+PDVV +N +I+   + GKM+    
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           + E M ++G++P+  TYN L+ GF   G    A  L   M  KG   DV +YN+LI A C
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
              +V  AV L  EM    + P+ +TYNT++ G    GN+  A ++  +M+         
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME--------- 501

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
                                      C+    + TYN  I   C++G++  A  L + +
Sbjct: 502 --------------------------KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             K  +P+ +T  T+     KEG M+K 
Sbjct: 536 LDKCLVPNGITYETI-----KEGMMEKG 558



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 191/384 (49%), Gaps = 35/384 (9%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F   ++ + SP + +F  +++ L +  Q      + K + + GL P +   N LI+  CK
Sbjct: 179 FRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCK 238

Query: 129 MGITSGAF---VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
            G     +   ++L  ++ +  +P  VTF  LING C       A R+F+++       +
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEM------VNE--FGAICK---------------- 221
           VVT+N+LI+GLC        +KL EEM       NE  FG + K                
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 222 --------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
                   PDVV YN +ID   + G ++ A  +   M  + I+PNV TYN LI GF    
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           DW+ A  L  EM + G++ DVVT+N +I   C  G++ K  +LL+ M + G+ P+ +TYN
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +++ GFC  G I  A E+   M     R +V +YN+ I   C+  K+++A  L  EML +
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538

Query: 394 RIRPSVITYNTLLSGLFQVGNLGD 417
            + P+ ITY T+  G+ + G   D
Sbjct: 539 CLVPNGITYETIKEGMMEKGYTPD 562



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 3/296 (1%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N  +  AV  F+ M +   +  + ++  L++ L    + +  V L + +   GL P+   
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
              ++   CK G+ + A   +  +      P+ V +N LI+     G++ +A  + + + 
Sbjct: 337 FGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA 396

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                PNV T+N LI G  R+ +   A  L +EM  E G   + DVVTYN +I  LC  G
Sbjct: 397 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM-KEKG--IEADVVTYNVLIGALCCKG 453

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V KA +LL +M +  + PN +TYN++I GFC   + K A  +   M     + +VVT+N
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
             I Y C+ GKMD+ N LL  M+ + + P+ +TY ++ +G    G     R   VS
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRGCTVS 569



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 3/161 (1%)

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P + +    + GL     V  A + F++    +    I T+N +I+GLC++G+L+ A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEG---QMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
              ++  G  P V T +++I   CK+G    M   + LL +M      P+ VTF  L+ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           + +N+  +  V +  +M  + +  S ++ +S +  L S+ K
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 262/550 (47%), Gaps = 15/550 (2%)

Query: 27  GRPPNPKTDLSSHHFKDGTSIAKFLND-----RHKSGNITSNEAVYFFDCMIKMKPSPGM 81
           GR  +    L       G +I  ++ D       K G +   +A+  FD MI     P  
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL--FDGMIASGLIPQA 382

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            ++  L+    + K       L   +    +    +    ++  +C  G   GA+ ++  
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           ++ S   PN V +  LI       R  +A R+ K++      P++  +N+LI GL + + 
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A     EMV E G   KP+  TY + I G  +      A + + +M++  + PN + 
Sbjct: 503 MDEARSFLVEMV-ENG--LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
              LI  +C  +   EA   +  M+D G+  D  T+  ++N   K+ K+D    +   M 
Sbjct: 560 CTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            +G+ PD  +Y  L++GF  +G + +A  +F  MV +G   +V  YN+L+   C+  ++E
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A  L  EM  + + P+ +TY T++ G  + G+L +A +L D+M+L  +VPDSF + T +
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ----H 497
           DG C+   V  A+ +F   +   C      +N LIN + K G+ +   ++ +RL      
Sbjct: 740 DGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +   P+ VT + MI +LCKEG ++ A +L   M+  N +P+ +T+ +LL G+ +  ++++
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858

Query: 558 VVVLLHKMAA 567
           +  +  +  A
Sbjct: 859 MFPVFDEAIA 868



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/574 (25%), Positives = 246/574 (42%), Gaps = 88/574 (15%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EAV+ F   + ++  P ++   +LL  L +  + D    ++K +    +  D+   ++L
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHML 227

Query: 123 INCLCKMGITS---------------------GAFVVLGRILRSCFTPNTVTFNFLINGL 161
           I   C+ G                        GA  +   ++     P   T++ LI+GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF----- 216
           C   R+ +A  L  +++      +  T++ LI+GL + RN   A  L  EMV+       
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347

Query: 217 ------------------------GAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                                   G I     P    Y S+I+G C++  V +  ELL++
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           MK RNI  +  TY +++ G C   D   A  +  EM+ +G +P+VV +  +I    ++ +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
                R+L+ M ++G+ PD   YNSL+ G     R+  AR   V MV  G + + ++Y  
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 370 -----------------------------------LINANCKDQKVEDAVCLYREMLSER 394
                                              LIN  CK +KV +A   YR M+ + 
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQG 587

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I     TY  L++GLF+   + DA ++  +M+   + PD F++   I+G  K G + +A 
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +F  +        +  YN L+ G C+ G ++ A +L   +  KG  P+ VT  T+I   
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           CK G + +A  L  +M+ K  VP    + TL+ G
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 237/518 (45%), Gaps = 46/518 (8%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI     P +  +T L+    +N ++   + + K +   G+ PD+F  N LI  L K   
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A   L  ++ +   PN  T+   I+G         A +  K++      PN V    
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LIN  C+    + A   +  MV++ G +   D  TY  +++GL K+  VD A+E+  +M+
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQ-GIL--GDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            + I P+V +Y  LI GF  + + ++A  +F EM++ G+ P+V+ +N ++   C+ G+++
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K   LL+ M  +G++P+ VTY +++DG+C  G ++ A  LF  M  KG   D + Y  L+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 372 NANCKDQKVEDAVCLY--------------------------REMLSERI---------- 395
           +  C+   VE A+ ++                           E+ +E +          
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799

Query: 396 --RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             +P+ +TYN ++  L + GNL  A +L  +MQ  +++P   T+ + ++G  K G   E 
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD-----VVTCS 508
             VF        E     Y+ +IN   K G    A  L  ++  K  + D     + TC 
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            ++    K G+M+ A  ++ +M     +P   T   L+
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 190/391 (48%), Gaps = 13/391 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   +  M+         ++T+L+  L KN + D    +F+ +   G+ PD+F   +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N   K+G    A  +   ++    TPN + +N L+ G C  G I +A  L  +++V    
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VT+ T+I+G C++ +   A +LF+EM  + G +  PD   Y +++DG C+   V++A
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLV--PDSFVYTTLVDGCCRLNDVERA 751

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV----QPDVVTFNA 299
             +    K +    +   +N+LI         +    +   +MD       +P+ VT+N 
Sbjct: 752 ITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           MI+Y CK+G ++    L   M    + P  +TY SL++G+  +GR +    +F   ++ G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI-----RPSVITYNTLLSGLFQVGN 414
              D   Y+++INA  K+     A+ L  +M ++       + S+ T   LLSG  +VG 
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           +  A K+++ M     +PDS T    I+  C
Sbjct: 931 MEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/461 (22%), Positives = 201/461 (43%), Gaps = 30/461 (6%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           + + V F  L +G  A+G I EA  +F         P +     L++ L R     +   
Sbjct: 148 SDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD 207

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR------NINPNVIT 261
           +++ MV         DV TY+ +I   C+ G V   K++L + +        N++  +  
Sbjct: 208 VYKGMVERNVVF---DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKL 264

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
             S+IC                     G+ P   T++ +I+  CK  +++    LL  M 
Sbjct: 265 KESMIC--------------------KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 304

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             GV+ D  TY+ L+DG         A+ L   MVS G     Y Y+  I    K+  +E
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A  L+  M++  + P    Y +L+ G  +  N+    +L+ +M+  ++V   +T+ T +
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            G+C +G +  A  + + +    C   +  Y  LI    +  R   A ++   ++ +G  
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           PD+   +++I  L K  +MD+A   L++M      P+  T+   + G+++ ++ +     
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           + +M  E  V+ +  L + +++   K +K  E  + +R ++
Sbjct: 545 VKEM-RECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMV 584


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 256/531 (48%), Gaps = 35/531 (6%)

Query: 57  SGNITSNEAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +G+    EA+  ++ +I +    P + +   LL +L  + + +    ++  +       D
Sbjct: 142 AGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVD 201

Query: 116 LFVLNLLINCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
            + + ++   LCK G +  G  ++  R  + C  PN V +N LI+G C  G I  A  LF
Sbjct: 202 NYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGC-VPNIVFYNTLIDGYCKNGDIERANLLF 260

Query: 175 KKLNVFACDPNVVTFNTLINGLCR---------------TRNTLVALKLFEEMVN----- 214
           K+L V    P V T+  +IN  C+                R   V+L++F  +++     
Sbjct: 261 KELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKH 320

Query: 215 --EFGAI----------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             E  A           C+PD+ TYN++I+G C  G V +A+ELL     R + PN  +Y
Sbjct: 321 GCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSY 380

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             LI  F    ++  A  L IEM + G   D++ + A+++     G++D    + + M++
Sbjct: 381 TPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMME 440

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RG+ PD   YN LM G C  GR   A++L V M+ +    D +    L++   +   +++
Sbjct: 441 RGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDE 500

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L++  +   I  SV+  N ++ G  + G + DAL    +M      PD FT++T ID
Sbjct: 501 AKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIID 560

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G  K   +  A+++F  +    C+  + T+  LING C+ G L  A K+F  ++  G  P
Sbjct: 561 GYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEP 620

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           +VVT + +I + CKEG++ KA      M    C+P++ TF  L+ G   NN
Sbjct: 621 NVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNN 671



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 231/464 (49%), Gaps = 8/464 (1%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD+F  N L+N L   G    A  V   ++      +  T   +  GLC EG++ E   L
Sbjct: 165 PDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHL 224

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIID 232
            +K     C PN+V +NTLI+G C+  +   A  LF+E+ V  F     P V TY ++I+
Sbjct: 225 IEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGF----LPTVKTYGAMIN 280

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
             CK G  +   +LL++MK+R +  ++  +N +I          EA      M+++G +P
Sbjct: 281 AFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEP 340

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D+ T+N +IN +C  GK+ +   LLE  I+RG+ P+  +Y  L+  F   G   RA EL 
Sbjct: 341 DMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELL 400

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
           + M  +G   D+ +Y  L++      +V+ A+ +  +M+   I P    YN L+SGL + 
Sbjct: 401 IEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKK 460

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G    A +L+ +M   +V PD+F  AT +DG  ++G + EA ++FQ       +  +   
Sbjct: 461 GRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVEC 520

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N +I G CK G +  A   F R+ +    PD  T ST+I    K+  +  A  +   M  
Sbjct: 521 NAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLK 580

Query: 533 KNCVPSEVTFCTLLRGFVQN---NKKSKVVVLLHKMAAEKLVVS 573
           K C P+ VTF +L+ GF +N   N+  KV   +     E  VV+
Sbjct: 581 KTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVT 624



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 227/492 (46%), Gaps = 43/492 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  ++    K  +++ V  L   +   GL   L + N +I+   K G    A   
Sbjct: 270 PTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADA 329

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  ++ S   P+  T+N LING C++G++ EA  L +        PN  ++  LI+   +
Sbjct: 330 VRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSK 389

Query: 199 TRNTLVALKLFEEMVNE--------FGAICK------------------------PDVVT 226
               + A +L  EM           +GA+                          PD   
Sbjct: 390 NGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANI 449

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN ++ GLCK G    AK+LL++M D+N+ P+     +L+ GF    +  EAK LF   +
Sbjct: 450 YNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTI 509

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           + G+   VV  NAMI   CK G M+      + M     +PD  TY++++DG+     + 
Sbjct: 510 ERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLR 569

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  +F  M+ K C+ +V ++  LIN  C++  +  A  ++ EM S    P+V+TY  L+
Sbjct: 570 GALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILI 629

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN-GFVLEA----------VQ 455
               + G L  A    ++M +N  +P+  TF   ++GL  N G  + +          ++
Sbjct: 630 GYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLE 689

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
            F  + +   + RI  YN ++  LC+   +K A +L  ++  KG  PD V+   ++H LC
Sbjct: 690 FFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLC 749

Query: 516 KEGQMDKANDLL 527
            EG++   N+++
Sbjct: 750 LEGRLQDWNNVI 761



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 221/517 (42%), Gaps = 49/517 (9%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  +  L+    KN   +    LFK L   G  P +     +IN  CK G       +
Sbjct: 235 PNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKL 294

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +       +   FN +I+     G  +EAA   + +    C+P++ T+NTLING C 
Sbjct: 295 LVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCS 354

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A +L E  +   G    P+  +Y  +I    K+G   +A ELL++M +R    +
Sbjct: 355 KGKVREAEELLEHAIRR-GLF--PNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLD 411

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           +I Y +L+ G     +   A  +  +MM+ G+ PD   +N +++  CK G+     +LL 
Sbjct: 412 LIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLV 471

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+ + V PD     +L+DGF   G +  A++LF   + +G    V   N +I   CK  
Sbjct: 472 EMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYG 531

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            + DA+  ++ M +    P   TY+T++ G  +  +L  AL++   M      P+  TF 
Sbjct: 532 MMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFT 591

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + I+G C+NG +  A +VF+ +R+   E  + TY  LI   CK G+L  AC  F ++   
Sbjct: 592 SLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLIN 651

Query: 499 GPIPDVVTCSTMIH-----------------------------------W---------- 513
             IP+  T + +++                                   W          
Sbjct: 652 KCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILL 711

Query: 514 -LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            LC+   +  A  L   M +K   P  V+F  LL G 
Sbjct: 712 CLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGL 748



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 11/224 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A+  F  M     SP   +++ ++    K       + +F  +      P++     L
Sbjct: 534 NDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSL 593

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN  C+ G  + A  V   +    F PN VT+  LI   C EG++ +A   F+++ +  C
Sbjct: 594 INGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKC 653

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVN---EFGAICKPD-----VVTYNSIIDGL 234
            PN  TFN L+NGL       ++ K      N   EF  +   D     +  YNSI+  L
Sbjct: 654 IPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCL 713

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC---VDDW 275
           C+   V  A +L  +M  +   P+ +++ +L+ G C    + DW
Sbjct: 714 CQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDW 757


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 225/460 (48%), Gaps = 7/460 (1%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N +I  LC+    + A   L  ++RS + P+  TFN LI G C   ++  A  LF K+ +
Sbjct: 15  NAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 74

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
                +VV++  LI G C T          +E V  FG + +PD+  Y +++ GLCK G 
Sbjct: 75  RGFAQDVVSYAALIEGFCETGR-------IDEAVELFGEMDQPDMHMYAALVKGLCKAGR 127

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
            ++   +L +MK+    P+   Y +++   C     KEA+ +  EM + G+ P VVT  A
Sbjct: 128 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +IN  CK+G+M    R+LELM  RG  P+  TYN+L+ GFC  G++ +A  L   M   G
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              D  +YN+LI   C D  +E A  L R M  + +     TYN L++ L + G    A 
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L D ++   + P++ TF + I+GLCK+G V  A +  + + +  C     TY+  I  L
Sbjct: 308 SLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHL 367

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CKM   +        +  K   P  V  + +IH L KE           +M +  C P  
Sbjct: 368 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 427

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           VT+ T +R +    + ++   +L +M+   + V  ++ ++
Sbjct: 428 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 467



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 245/524 (46%), Gaps = 23/524 (4%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + EA      M +   +P + + T ++    K  +    + + + +   G  P+++  N 
Sbjct: 163 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 222

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+   C  G    A  +L ++      P+ VT+N LI G C +G I  A RL + +    
Sbjct: 223 LVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 282

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              +  T+N LIN LC+   T  A  LF+ +  E   I KP+ VT+NS+I+GLCK G VD
Sbjct: 283 LIADQYTYNALINALCKDGRTDQACSLFDSL--ETRGI-KPNAVTFNSLINGLCKSGKVD 339

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A + L +M      P+  TY+S I   C +   +E      EM+   V+P  V +  +I
Sbjct: 340 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 399

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K+     V R    M+  G NPD VTY + M  +C+ GR++ A  + + M   G  
Sbjct: 400 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 459

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL--------------- 406
            D  +YN L++ +    + + AV + ++M S    P+  TY  LL               
Sbjct: 460 VDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPL 519

Query: 407 --SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
             +G+++   L D   L D M+ N+ +P+S T+++ ++G  ++G   EA  +   ++   
Sbjct: 520 TPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDS 579

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
             L  + Y  L+   CK  R   A  L   +   G IP +++   ++  L  EGQ DKA 
Sbjct: 580 ISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAK 639

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS---KVVVLLHKM 565
           ++ ++   K+  P E+ +  ++ G ++        +++++L +M
Sbjct: 640 EIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERM 683



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 260/542 (47%), Gaps = 27/542 (4%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            FD M     +  + S+  L+    +  + D  V LF  ++     PD+ +   L+  LC
Sbjct: 68  LFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLC 123

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G      ++L R+    + P+T  +  +++  C E +  EA  + +++      P VV
Sbjct: 124 KAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVV 183

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T   +IN  C+      AL++ E M       CKP+V TYN+++ G C +G V KA  LL
Sbjct: 184 TCTAVINAYCKEGRMSDALRVLELMKLRG---CKPNVWTYNALVQGFCNEGKVHKAMALL 240

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-NGVQPDVVTFNAMINYNCK 306
            +M+   +NP+ +TYN LI G  C+D   E+    + +M+ +G+  D  T+NA+IN  CK
Sbjct: 241 NKMRVCGVNPDAVTYNLLIRG-QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 299

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           DG+ D+   L + +  RG+ P+ VT+NSL++G C  G++  A +    MVS GC  D Y+
Sbjct: 300 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYT 359

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y+  I   CK +  ++ +    EML + ++PS + Y  ++  L +  N G   +   +M 
Sbjct: 360 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 419

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            +   PD  T+ T +   C  G + EA  V   +      +    YN L++G   +G+  
Sbjct: 420 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 479

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCK-----------EGQMDKANDL-----LLDM 530
            A  +  ++     +P+  T   ++  L +              + KA +L     L D+
Sbjct: 480 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 539

Query: 531 EAKN-CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
             KN  +P+  T+ ++L GF ++ +  +   L+  M  + + +++  + + +V    K K
Sbjct: 540 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNE-DIYTALVTCFCKSK 598

Query: 590 KY 591
           +Y
Sbjct: 599 RY 600



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 235/485 (48%), Gaps = 7/485 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++  ++  L +     + +     +  +G  PD +  N LI   C+      A  +  ++
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
               F  + V++  LI G C  GRI EA  LF +++     P++  +  L+ GLC+    
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
              L +   M  E G   +P    Y +++D  C +    +A+E+L +M ++ + P V+T 
Sbjct: 129 EEGLLMLRRM-KELG--WRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTC 185

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            ++I  +C      +A  +   M   G +P+V T+NA++   C +GK+ K   LL  M  
Sbjct: 186 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRV 245

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            GVNPD VTYN L+ G C+ G I  A  L   M   G   D Y+YN LINA CKD + + 
Sbjct: 246 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 305

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L+  + +  I+P+ +T+N+L++GL + G +  A K ++KM      PD++T++++I+
Sbjct: 306 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIE 365

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
            LCK     E +     +     +     Y  +I+ L K        + +  +   G  P
Sbjct: 366 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 425

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           DVVT +T +   C EG++++A ++L++M         + + TL+ G     +    V +L
Sbjct: 426 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 485

Query: 563 HKMAA 567
            +M +
Sbjct: 486 KQMTS 490



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 186/377 (49%), Gaps = 5/377 (1%)

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TYN++I  LC+   +  A   L  M      P+  T+NSLI G+C  +    A+ LF +M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
              G   DVV++ A+I   C+ G++D+   L   M Q    PD   Y +L+ G C  GR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
                +   M   G R    +Y  +++  C ++K ++A  + +EM  + + P V+T   +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           ++   + G + DAL++++ M+L    P+ +T+   + G C  G V +A+ +   +R C  
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                TYN LI G C  G +++A +L   ++  G I D  T + +I+ LCK+G+ D+A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           L   +E +   P+ VTF +L+ G  ++ K       L KM +        + SS  ++ L
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSS-FIEHL 367

Query: 586 SKDKKYRECLNQFRHLL 602
            K K  +E L+    +L
Sbjct: 368 CKMKGSQEGLSFIGEML 384



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/569 (23%), Positives = 221/569 (38%), Gaps = 104/569 (18%)

Query: 3   FKSSHRSFSLASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDG-----TSIAKFLNDRHKS 57
           ++ S R++  A+   +RC     + R      ++    F+ G      +    +N   K 
Sbjct: 143 WRPSTRAY--AAVVDFRC-----WERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKE 195

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G ++  +A+   + M      P + ++  L+       +    ++L  ++   G+ PD  
Sbjct: 196 GRMS--DALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAV 253

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             NLLI   C  G    AF +L  +       +  T+N LIN LC +GR  +A  LF  L
Sbjct: 254 TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL 313

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 PN VTFN+LINGLC++    +A K  E+MV+   A C PD  TY+S I+ LCK 
Sbjct: 314 ETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVS---AGCTPDTYTYSSFIEHLCKM 370

Query: 238 GFVDKAKELLLQM--------------------KDRNI---------------NPNVITY 262
               +    + +M                    K+RN                NP+V+TY
Sbjct: 371 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 430

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK---------- 312
            + +  +C      EA+ + +EM  NGV  D + +N +++ +   G+ D           
Sbjct: 431 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 490

Query: 313 ------------------------------------------VNRLLELMIQRGVNPDTV 330
                                                     V  L ++M +    P++ 
Sbjct: 491 VASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSG 550

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TY+S+++GF   GR   A  L   M       +   Y  L+   CK ++  DA  L   M
Sbjct: 551 TYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSM 610

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           +     P +++Y  LLSGL   G    A ++    +  D  PD   +   IDGL K G  
Sbjct: 611 IQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHS 670

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGL 479
             + ++   +    C    +TY  L   L
Sbjct: 671 DISREMIIMLERMNCRPSHQTYAMLTEEL 699


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 150/505 (29%), Positives = 255/505 (50%), Gaps = 5/505 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +++    K   YD  V LF  + ++ + PD  V ++ I  LCK+   + A +VL ++ 
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
            + F P   TFN +++ L   GR+ EA  +  +L       +VV   TL++G C  R   
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            AL +FEE + + G +  P  VTY  +I G  ++G  +KA EL  QM+D  + P+   +N
Sbjct: 300 KALDIFEETLRD-GLV--PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN 356

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            +I G      WK+A  LF EM D+G+ PD  T+N +I++ C+  K+ +   L E M + 
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNET 415

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           GV P  VTY+SL+  +C+ G +  A +L+  M  KG   +V +Y  L+  +      + A
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EM    +  +  TYNTL++GL  VG + +  +++ + +    VP + T+ + I+G
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             K G +  A  V+Q +        I TY   I+G CK      A K+ + ++ KG  PD
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPD 595

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +   +++I+  C+EG M  A  +L+ M     +P+   + + + G+       + +    
Sbjct: 596 IAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYE 655

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKD 588
           KM  E + + D +  + ++D  SKD
Sbjct: 656 KMIKEGIDL-DTATYTTLIDGFSKD 679



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 261/514 (50%), Gaps = 4/514 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA++  D ++       +   T L+      ++    + +F+    +GL P      +L
Sbjct: 264 EEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVL 323

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I    + G+   A+ +  ++      P+T  FN +I GL  +    +A  LFK++     
Sbjct: 324 IRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI 383

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  T+N LI+ LC+ R    AL L+E+M NE G   KP +VTY+S++   C +G +D+
Sbjct: 384 -PDAFTYNILIHWLCQRRKIREALNLWEKM-NETGV--KPYIVTYHSLLLCYCVNGCMDE 439

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M  +   PNV+TY +L+ G      + +A  L  EM  NGV  +  T+N +IN
Sbjct: 440 AVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLIN 499

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C  G++ +V  +L+     G  P  +TYNS+++GF   G +  A  ++  M +KG   
Sbjct: 500 GLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPP 559

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++ +Y   I+  CK    + A+ +  ++  + +RP +  YN+L+ G  Q GN+  AL+++
Sbjct: 560 NIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVL 619

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M  + ++P+   + ++I G      + EA++ ++ +     +L   TY  LI+G  K 
Sbjct: 620 VLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKD 679

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G +  A KL+  +  KG IPD +T + + H LC+ G +D A  LL +M   +  P+ + +
Sbjct: 680 GNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMY 739

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
             L+ G+++N K  +   L  +M   K++  D +
Sbjct: 740 NMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 223/456 (48%), Gaps = 10/456 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    F +++  L  +K +   VSLFK +  +G+ PD F  N+LI+ LC+      A  +
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++  +   P  VT++ L+   C  G + EA +L+ ++      PNVVT+ TL+ G   
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  L  EM  + G  C  +  TYN++I+GLC  G V +  E+L + +     P 
Sbjct: 469 KAAFDKAYALLAEM-KQNGVSC--NDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +TYNS+I GF        A  ++ +M   G+ P++VT+ + I+  CK    D   ++L 
Sbjct: 526 AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLN 585

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            +  +G+ PD   YNSL+ GFC  G +S A ++ V M+  G   ++  YN  I      +
Sbjct: 586 DVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLK 645

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +E+A+  Y +M+ E I     TY TL+ G  + GN+  ALKL  +M     +PD  TF 
Sbjct: 646 MMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFT 705

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
               GLC+NG + +A ++   +        +  YN LING  + G+L+ A +L   +  +
Sbjct: 706 ALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
             +PD  T   ++      G     +D  +D E  N
Sbjct: 766 KIMPDDTTYDILV------GMKSLGSDSPIDAENPN 795



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 236/483 (48%), Gaps = 4/483 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  F+  ++    P   ++T+L+    +    +    L +++  +GL P     N++I
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L    +   A V L + +     P+  T+N LI+ LC   +I EA  L++K+N     
Sbjct: 360 KGLLNDKLWKDA-VSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK 418

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P +VT+++L+   C       A+KL+ EM    G    P+VVTY +++ G       DKA
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMP---GKGFTPNVVTYTTLMKGHINKAAFDKA 475

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL +MK   ++ N  TYN+LI G C V    E   +       G  P  +T+N++IN 
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G M     + + M  +G+ P+ VTY S +DG+C       A ++   +  KG R D
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPD 595

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +YN LI   C++  +  A+ +   ML + + P++  YN+ ++G   +  + +AL+  +
Sbjct: 596 IAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYE 655

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           KM    +  D+ T+ T IDG  K+G V  A++++  +          T+  L +GLC+ G
Sbjct: 656 KMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNG 715

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A KL   +      P+V+  + +I+   + G++ +A  L  +M  +  +P + T+ 
Sbjct: 716 DIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYD 775

Query: 544 TLL 546
            L+
Sbjct: 776 ILV 778



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 181/355 (50%), Gaps = 10/355 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  +  M     +P + ++T L+        +D   +L   +  NG+  + +  N L
Sbjct: 438 DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTL 497

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LC +G       +L R     F P  +T+N +ING    G +  A  +++++     
Sbjct: 498 INGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGF 239
            PN+VT+ + I+G C+T    +ALK+  ++       CK   PD+  YNS+I G C++G 
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVR------CKGLRPDIAAYNSLIYGFCQEGN 611

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +  A ++L+ M    + PN+  YNS I G+  +   +EA   + +M+  G+  D  T+  
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTT 671

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+   KDG +    +L   M+ +G  PD +T+ +L  G C  G I  AR+L   M    
Sbjct: 672 LIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLD 731

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
            R +V  YN+LIN   ++ K+++A  L+ EML  +I P   TY+ L+ G+  +G+
Sbjct: 732 IRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV-GMKSLGS 785



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 166/357 (46%), Gaps = 1/357 (0%)

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D   ++ ++    K+G  D A  L  +M    I P+    +  I   C + D   A  + 
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M D G  P   TFN++++   K G+M++   + + ++  G     V   +LM G+CL 
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             + +A ++F   +  G      +Y +LI    ++   E A  L R+M    + PS   +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N ++ GL       DA+ L  +M  +  +PD+FT+   I  LC+   + EA+ +++ +  
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMA-DSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNE 414

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              +  I TY+ L+   C  G +  A KL+  +  KG  P+VVT +T++     +   DK
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           A  LL +M+      ++ T+ TL+ G     +  +V  +L +   E  V + ++ +S
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 2/282 (0%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M  RGV PD  +   L+         + A  L   M  KG   D + +++++ A  K+  
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            +DAV L+ EM +  I P     +  ++ L ++ +   AL ++ KMQ    VP  FTF +
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +D L K G + EA+ +   +     ++ +     L++G C    ++ A  +F      G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            +P  VT + +I    +EG  +KA +L   M     +PS   F  +++G + +      V
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            L  +MA     + D    + ++  L + +K RE LN +  +
Sbjct: 373 SLFKEMADSG--IPDAFTYNILIHWLCQRRKIREALNLWEKM 412


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 244/491 (49%), Gaps = 17/491 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  ++++ ++ +L    + D    LF+ + SN + PD+F   +LI+  CK+G+   A   
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              ++R    PN VT+  LI+      ++  A  LF+ +    C PNVVT+  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 199 TRNTLVALKLFEEMVN-------------EFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           +     A +++  M               + G I  P++ TY +++DGLCK   V +A++
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           LL  M      PN I Y++LI GFC V    EA+ +F +M + G  P+V T++++I+   
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           KD ++D   ++L  M++    P+ + Y  ++DG C VG+   A  L   M  KGC  +V 
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVV 777

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y  +I+   K  KV+  + L R+M ++   P+ +TY  L++     G L DA +L+D+M
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +          +   I+G  +  F++    + +   N    + I  Y  LI+  CK GRL
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNRE-FIISLGLLDEIAENVAVPI-IPAYRILIDSFCKAGRL 895

Query: 486 KTACKLFHRLQH--KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           + A +L   +         D    S++I  L    ++DKA +L  DM  +  +P    F 
Sbjct: 896 ELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFF 955

Query: 544 TLLRGFVQNNK 554
            L++G ++ N+
Sbjct: 956 YLVKGLIRINR 966



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 256/580 (44%), Gaps = 64/580 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  L+ +  +  + DT   + + ++ +G   D + L   ++ LCK G    A   
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA--- 286

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  I +  F  +TV +  +I+GLC      EA     ++   +C PNVVT+  L+ G  R
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            R      ++   M+ E    C P    +NS+I   C+ G    A +LL +M D    P 
Sbjct: 347 KRQLGRCKRILSMMITEG---CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 259 VITYNSLICG-----------------------------------------FCCVDDWKE 277
            + YN LI G                                          C    +++
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +  EMM  G  PD  T++ +I   C   K+D    L E M    V PD  TY  L+D
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC VG + +AR+ F  MV  GC  +V +Y  LI+A  K +K+  A  L+  MLSE   P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS----------------FTFATYI 441
           +V+TY  L+ G  + G +  A ++  +M+ N  +PD                 FT+   +
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCK   V EA  +   +    CE     Y+ LI+G CK+G+L  A  +F ++  +G  
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P+V T S++I  L K+ ++D A  +L  M   +C P+ + +  ++ G  +  K  +   L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +  M  EK    ++   + ++D   K  K  +CL   R +
Sbjct: 764 M-SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 239/532 (44%), Gaps = 68/532 (12%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +LN+LI   C+ G+ + A   LGR+    + P+ +T+N L+       R+  A  + +++
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           +    + +  T    ++ LC+      AL L E+   EF    K D V Y  +I GLC+ 
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK--EEF----KLDTVIYTQMISGLCEA 312

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC--LFIEMMDNGVQPDVV 295
              ++A + L +M+  +  PNV+TY  L+CG  C+   +  +C  +   M+  G  P   
Sbjct: 313 SLFEEAMDFLSRMRSSSCIPNVVTYRILLCG--CLRKRQLGRCKRILSMMITEGCYPSRR 370

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG----------------- 338
            FN++I+  C+ G      +LL+ M   G  P  V YN L+ G                 
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 339 ------------------------FCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
                                    C  G+  +A  +   M+SKG   D  +Y+ +I   
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   KV++A  L+ EM S  + P V TY  L+    +VG L  A K  D+M  +   P+ 
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   I    K   +  A ++F+ + +  C   + TY  LI+G CK G+++ AC+++ R
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 495 LQHKGPIPDV----------------VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           ++    IPDV                 T   ++  LCK  ++ +A DLL  M  + C P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            + +  L+ GF +  K  +  ++  KM +E+    ++   S ++D L KDK+
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKM-SERGYGPNVYTYSSLIDRLFKDKR 721



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 9/299 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D M      P    +  L+    K  + D    +F +++  G  P+++  + LI
Sbjct: 654 EARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLI 713

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L K      A  VL R+L +   PN + +  +I+GLC  G+  EA RL   +    C 
Sbjct: 714 DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDK 242
           PNVVT+  +I+G  +       L+L  +M    GA  C P+ VTY  +I+  C  G +D 
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQM----GAKGCAPNFVTYRVLINHCCAAGLLDD 829

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +MK      ++  Y  +I GF    ++  +  L  E+ +N   P +  +  +I+
Sbjct: 830 AHQLLDEMKQTYWPKHMAGYRKVIEGFN--REFIISLGLLDEIAENVAVPIIPAYRILID 887

Query: 303 YNCKDGKMDKVNRLLELMIQ--RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             CK G+++    L + M         D   Y+SL++   L  ++ +A EL+  M+ +G
Sbjct: 888 SFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRG 946


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 255/505 (50%), Gaps = 5/505 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +++    K   YD  V LF  + ++ + PD  V ++ I  LCK+   + A +VL ++ 
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
            + F P   TFN +++ L   GR+ EA  +  +L       +VV   TL++G C  R   
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            AL +FEE + + G +  P  VTY  +I G  ++G  +KA EL  QM+D  + P+   +N
Sbjct: 300 KALDIFEETLRD-GLV--PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN 356

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            +I G      WK+A  LF EM D+G+ PD  T+N +I++ C+  K+ +   L E M + 
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNET 415

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           GV P  VTY+SL+  +C+ G +  A +L+  M  KG   +V +Y  L+  +      + A
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EM    +  +  TYNTL++GL  VG + +  +++ + +    VP + T+ + I+G
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             K G +  A  V+Q +        I TY   I+G CK      A K+ + ++ KG  PD
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPD 595

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +   +++I   C+EG M  A  +L+ M     +P+   + + + G+       + + L  
Sbjct: 596 IAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYE 655

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKD 588
           KM  E + + D +  + ++D  SKD
Sbjct: 656 KMIKEGIDL-DTATYTTLIDGFSKD 679



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 262/514 (50%), Gaps = 4/514 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA++  D ++       +   T L+      ++    + +F+    +GL P      +L
Sbjct: 264 EEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVL 323

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I    + G+   A+ +  ++      P+T  FN +I GL  +    +A  LFK++     
Sbjct: 324 IRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI 383

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  T+N LI+ LC+ R    AL L+E+M NE G   KP +VTY+S++   C +G +D+
Sbjct: 384 -PDAFTYNILIHWLCQRRKIREALNLWEKM-NETGV--KPYIVTYHSLLLCYCVNGCMDE 439

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M  +   PNV+TY +L+ G      + +A  L  EM  NGV  +  T+N +IN
Sbjct: 440 AVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLIN 499

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C  G++ +V  +L+     G  P  +TYNS+++GF   G +  A  ++  M +KG   
Sbjct: 500 GLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPP 559

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++ +Y   I+  CK    + A+ +  ++  + +RP +  YN+L+ G  Q GN+  AL+++
Sbjct: 560 NIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVL 619

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M  + ++P+   + ++I G      + EA+++++ +     +L   TY  LI+G  K 
Sbjct: 620 VLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKD 679

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G +  A KL+  +  KG IPD +T + + H LC+ G +D A  LL +M   +  P+ + +
Sbjct: 680 GNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMY 739

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
             L+ G+++N K  +   L  +M   K++  D +
Sbjct: 740 NMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 224/456 (49%), Gaps = 10/456 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P    F +++  L  +K +   VSLFK +  +G+ PD F  N+LI+ LC+      A  +
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++  +   P  VT++ L+   C  G + EA +L+ ++      PNVVT+ TL+ G   
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  L  EM  + G  C  +  TYN++I+GLC  G V +  E+L + +     P 
Sbjct: 469 KAAFDKAYALLAEM-KQNGVSC--NDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +TYNS+I GF        A  ++ +M   G+ P++VT+ + I+  CK    D   ++L 
Sbjct: 526 AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLN 585

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            +  +G+ PD   YNSL+ GFC  G +S A ++ V M+  G   ++  YN  I      +
Sbjct: 586 DVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLK 645

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +E+A+ LY +M+ E I     TY TL+ G  + GN+  ALKL  +M     +PD  TF 
Sbjct: 646 MMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFT 705

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
               GLC+NG + +A ++   +        +  YN LING  + G+L+ A +L   +  +
Sbjct: 706 ALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
             +PD  T   ++      G     +D  +D E  N
Sbjct: 766 KIMPDDTTYDILV------GMKSLGSDSPIDAENPN 795



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 237/483 (49%), Gaps = 4/483 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  F+  ++    P   ++T+L+    +    +    L +++  +GL P     N++I
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L    +   A V L + +     P+  T+N LI+ LC   +I EA  L++K+N     
Sbjct: 360 KGLLNDKLWKDA-VSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK 418

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P +VT+++L+   C       A+KL+ EM    G    P+VVTY +++ G       DKA
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMP---GKGFTPNVVTYTTLMKGHINKAAFDKA 475

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL +MK   ++ N  TYN+LI G C V    E   +       G  P  +T+N++IN 
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G M     + + M  +G+ P+ VTY S +DG+C       A ++   +  KG R D
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPD 595

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +YN LI   C++  +  A+ +   ML + + P++  YN+ ++G   +  + +AL+L +
Sbjct: 596 IAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYE 655

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           KM    +  D+ T+ T IDG  K+G V  A++++  +          T+  L +GLC+ G
Sbjct: 656 KMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNG 715

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A KL   +      P+V+  + +I+   + G++ +A  L  +M  +  +P + T+ 
Sbjct: 716 DIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYD 775

Query: 544 TLL 546
            L+
Sbjct: 776 ILV 778



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 10/355 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  +  M     +P + ++T L+        +D   +L   +  NG+  + +  N L
Sbjct: 438 DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTL 497

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LC +G       +L R     F P  +T+N +ING    G +  A  +++++     
Sbjct: 498 INGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGF 239
            PN+VT+ + I+G C+T    +ALK+  ++       CK   PD+  YNS+I G C++G 
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVR------CKGLRPDIAAYNSLIFGFCQEGN 611

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +  A ++L+ M    + PN+  YNS I G+  +   +EA  L+ +M+  G+  D  T+  
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTT 671

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+   KDG +    +L   M+ +G  PD +T+ +L  G C  G I  AR+L   M    
Sbjct: 672 LIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLD 731

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
            R +V  YN+LIN   ++ K+++A  L+ EML  +I P   TY+ L+ G+  +G+
Sbjct: 732 IRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV-GMKSLGS 785



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 166/357 (46%), Gaps = 1/357 (0%)

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D   ++ ++    K+G  D A  L  +M    I P+    +  I   C + D   A  + 
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            +M D G  P   TFN++++   K G+M++   + + ++  G     V   +LM G+CL 
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             + +A ++F   +  G      +Y +LI    ++   E A  L R+M    + PS   +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N ++ GL       DA+ L  +M  +  +PD+FT+   I  LC+   + EA+ +++ +  
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMA-DSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNE 414

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              +  I TY+ L+   C  G +  A KL+  +  KG  P+VVT +T++     +   DK
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           A  LL +M+      ++ T+ TL+ G     +  +V  +L +   E  V + ++ +S
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 2/282 (0%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M  RGV PD  +   L+         + A  L   M  KG   D + +++++ A  K+  
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            +DAV L+ EM +  I P     +  ++ L ++ +   AL ++ KMQ    VP  FTF +
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +D L K G + EA+ +   +     ++ +     L++G C    ++ A  +F      G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            +P  VT + +I    +EG  +KA +L   M     +PS   F  +++G + +      V
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            L  +MA     + D    + ++  L + +K RE LN +  +
Sbjct: 373 SLFKEMADSG--IPDAFTYNILIHWLCQRRKIREALNLWEKM 412


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 219/408 (53%), Gaps = 6/408 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+T + N L+ GL    R+  A + F+        P++ TFNT+I+GLCR      A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE---LLLQMKDRNINPNVITYNSL 265
            ++ +  +G    P V TYNS+IDG CK G          LL +M +  I+P  +T+  L
Sbjct: 214 AKD-IKAWG--LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G+C   +   A  +F EM   G+   VVT+N++I+  C +GK+++  +L+E M   G+
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
           +P+ +T+  ++ GFC  G ++ A +    M  +    DV  YNILI+   +  K+EDA+ 
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           +   M  + I P+V TYN L++G  + G+   A  L+D+M+   +  D  T+   I  LC
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
             G V +AV++   +     E    TYN +I G C  G +K+A ++  R++      +VV
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           T +  I + C+ G+MD+ANDLL +M  K  VP+ +T+ T+  G ++  
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 212/448 (47%), Gaps = 46/448 (10%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  +S   LL  L   K+ D     F+      + PD++  N +I+ LC++G    A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 139 LGRILRSCFTPNTVTFNFLINGLC---AEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
              I      P+  T+N LI+G C     G +     L K++      P  VTF  LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            C+  NT  A+++FEEM  +  A     VVTYNS+I GLC +G V++  +L+ +M+D  +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAA---SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           +PN IT+  ++ GFC      +A      M +  V+PDVV +N +I+   + GKM+    
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           + E M ++G++P+  TYN L+ GF   G    A  L   M  KG   DV +YN+LI A C
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
              +V  AV L  EM    + P+ +TYNT++ G    GN+  A ++  +M+         
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME--------- 501

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
                                      C+    + TYN  I   C++G++  A  L + +
Sbjct: 502 --------------------------KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             K  +P+ +T  T+     KEG M+K 
Sbjct: 536 LDKCLVPNGITYETI-----KEGMMEKG 558



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 191/384 (49%), Gaps = 35/384 (9%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F   ++ + SP + +F  +++ L +  Q      + K + + GL P +   N LI+  CK
Sbjct: 179 FRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCK 238

Query: 129 MGITSGAF---VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
            G     +   ++L  ++ +  +P  VTF  LING C       A R+F+++       +
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEM------VNE--FGAICK---------------- 221
           VVT+N+LI+GLC        +KL EEM       NE  FG + K                
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 222 --------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
                   PDVV YN +ID   + G ++ A  +   M  + I+PNV TYN LI GF    
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           DW+ A  L  EM + G++ DVVT+N +I   C  G++ K  +LL+ M + G+ P+ +TYN
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +++ GFC  G I  A E+   M     R +V +YN+ I   C+  K+++A  L  EML +
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538

Query: 394 RIRPSVITYNTLLSGLFQVGNLGD 417
            + P+ ITY T+  G+ + G   D
Sbjct: 539 CLVPNGITYETIKEGMMEKGYTPD 562



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 116/250 (46%), Gaps = 8/250 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            E V   + M  +  SP   +F  +L    K             +    + PD+ + N+L
Sbjct: 316 EEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNIL 375

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   ++G    A  V   + +   +PN  T+N LI G    G    A+ L  ++     
Sbjct: 376 IDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + +VVT+N LI  LC       A+KL +EM +E G   +P+ +TYN+II G C  G +  
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEM-SEVG--LEPNHLTYNTIIQGFCDKGNIKS 492

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+  +M+      NV+TYN  I  FC +    EA  L  EM+D  + P+ +T+  +  
Sbjct: 493 AYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI-- 550

Query: 303 YNCKDGKMDK 312
              K+G M+K
Sbjct: 551 ---KEGMMEK 557



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 23/229 (10%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           + D M +    P +  + IL+ +  +  + +  +++ + +   G+ P++   N LI    
Sbjct: 356 WIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFS 415

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           + G    A  +L  +       + VT+N LI  LC +G + +A +L  +++    +PN +
Sbjct: 416 RSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHL 475

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC--KPDVVTYNSIIDGLCKDGFVDKAKE 245
           T+NT+I G C   N   A ++   M       C  + +VVTYN  I   C+ G +D+A +
Sbjct: 476 TYNTIIQGFCDKGNIKSAYEIRTRMEK-----CRKRANVVTYNVFIKYFCQIGKMDEAND 530

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           LL +M D+ + PN ITY ++  G                MM+ G  PD+
Sbjct: 531 LLNEMLDKCLVPNGITYETIKEG----------------MMEKGYTPDI 563



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 3/177 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+   + M K   SP +T++  L+T  +++  + +   L   +   G+  D+   N+L
Sbjct: 386 EDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  LC  G    A  +L  +      PN +T+N +I G C +G I  A  +  ++     
Sbjct: 446 IGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             NVVT+N  I   C+      A  L  EM+++      P+ +TY +I +G+ + G+
Sbjct: 506 RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK---CLVPNGITYETIKEGMMEKGY 559



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 3/161 (1%)

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P + +    + GL     V  A + F++    +    I T+N +I+GLC++G+L+ A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEG---QMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
              ++  G  P V T +++I   CK+G    M   + LL +M      P+ VTF  L+ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           + +N+  +  V +  +M  + +  S ++ +S +  L S+ K
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 258/510 (50%), Gaps = 6/510 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG     EA+ F D M++ K +P + ++ +L++ L K + ++    +   + S G  P+
Sbjct: 302 KSGRF--EEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPN 359

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             V N LI+  C+ G    A  V   +      PN VTFN L+ G C   ++ +A ++  
Sbjct: 360 EVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLV 419

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +       N+   + +I+ L      + ALK+  ++++  G I   D +    ++ GLC
Sbjct: 420 YILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLS--GNIRVSDSL-LTPLVVGLC 476

Query: 236 KDGFVDKAKELLLQMKD-RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           K     +A EL  ++   + +  N +T N+L+ G C   + +E   +  +M++ G+  D 
Sbjct: 477 KCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDR 536

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           +++N +I   CK GK+++  +L E M+Q+   PDT TYN LM G   +G+I     L   
Sbjct: 537 ISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHE 596

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
               G   +VY+Y +L+   CK  ++EDAV  ++ +  E++  S + YN L++   ++GN
Sbjct: 597 AKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGN 656

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           + +A KL D M+   ++P   T+++ I G+C  G V EA ++F+ +RN      +  Y  
Sbjct: 657 VTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTA 716

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI G CK+G++     +   +   G  P+ +T + MI   CK G M +A +LL +M    
Sbjct: 717 LIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNG 776

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
             P  VT+  L +G+ +  + +  +   HK
Sbjct: 777 IAPDTVTYNALQKGYCKERELTVTLQSDHK 806



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/561 (27%), Positives = 276/561 (49%), Gaps = 50/561 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +  +LL+ L K  +      +F  L   G+ PD+F     IN  CK G    A  +
Sbjct: 219 PCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAINAFCKGGRVGDAVDL 277

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++      PN VT+N +I+GL   GR  EA R   ++     +P+VVT+  LI+GL +
Sbjct: 278 FCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMK 337

Query: 199 TRNTLVALKLFEE----MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
                  L++FEE    +V  +     P+ V +N++IDG C+ G + +A  +  +M  + 
Sbjct: 338 -------LEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKG 390

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG--VQPDVVTF--------------- 297
           + PN +T+N+L+ GFC  +  ++A+ + + ++ +G  V  DV ++               
Sbjct: 391 MKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSAL 450

Query: 298 ---NAMINYN---------------CK-DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
                +++ N               CK +G  + +    +L   +G+  +TVT N+L+ G
Sbjct: 451 KIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHG 510

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            C  G +    E+   M+ KG   D  SYN LI   CK  K+E+A  L  EM+ +  +P 
Sbjct: 511 LCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPD 570

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
             TYN L+ GL  +G + D  +L+ + +    VP+ +T+A  ++G CK   + +AV+ F+
Sbjct: 571 TYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFK 630

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +   K EL    YN LI   C++G +  A KL   ++ +G +P   T S++IH +C  G
Sbjct: 631 NLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIG 690

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
           ++D+A ++  +M  +  +P+   +  L+ G  +  +   V  +L +M++  +  + ++ +
Sbjct: 691 RVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYT 750

Query: 579 SKVVDL--LSKDKKYRECLNQ 597
             +     L   K+ RE LN+
Sbjct: 751 IMIDGYCKLGNMKEARELLNE 771



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 173/362 (47%), Gaps = 4/362 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
            T L+  L K + +   + L+ +L +  GL  +    N L++ LC+ G     F VL ++
Sbjct: 468 LTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQM 527

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L      + +++N LI G C  G+I EA +L +++      P+  T+N L+ GL      
Sbjct: 528 LEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKI 587

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
               +L  E   E+G +  P+V TY  +++G CK   ++ A +    +    +  + + Y
Sbjct: 588 DDVHRLLHE-AKEYGFV--PNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVY 644

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N LI  +C + +  EA  L   M   G+ P   T++++I+  C  G++D+   + E M  
Sbjct: 645 NILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRN 704

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G+ P+   Y +L+ G C +G++     + + M S G R +  +Y I+I+  CK   +++
Sbjct: 705 EGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKE 764

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L  EM+   I P  +TYN L  G  +   L   L+   K  +   + +  T+ T I 
Sbjct: 765 ARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEEEITYNTLIH 824

Query: 443 GL 444
            L
Sbjct: 825 KL 826



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 164/364 (45%), Gaps = 37/364 (10%)

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++ +    R + P + T N L+      ++  ++  +F ++   GV PDV TF   IN
Sbjct: 205 AFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAIN 263

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++     L   M   GV P+ VTYN+++DG    GR   A      MV      
Sbjct: 264 AFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNP 323

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            V +Y +LI+   K +  E+A  +  EM S    P+ + +N L+ G  + G++G+AL++ 
Sbjct: 324 SVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVR 383

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN----- 477
           D+M +  + P+  TF T + G C++  + +A QV   I +    + ++  + +I+     
Sbjct: 384 DEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMER 443

Query: 478 ------------------------------GLCKMGRLKTACKLFHRLQH-KGPIPDVVT 506
                                         GLCK      A +L+ +L   KG   + VT
Sbjct: 444 SGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVT 503

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            + ++H LC+ G M++  ++L  M  K  +   +++ TL+ G  +  K  +   L  +M 
Sbjct: 504 SNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMV 563

Query: 567 AEKL 570
            ++ 
Sbjct: 564 QQEF 567



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 154/322 (47%), Gaps = 1/322 (0%)

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +F+     GV P + T N +++   K  ++ K   + +L  Q GV PD  T+ + ++ FC
Sbjct: 208 IFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLACQ-GVAPDVFTFTTAINAFC 266

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             GR+  A +LF  M   G   +V +YN +I+   K  + E+A+     M+  ++ PSV+
Sbjct: 267 KGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVV 326

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TY  L+SGL ++    +A +++ +M      P+   F   IDG C+ G + EA++V   +
Sbjct: 327 TYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEM 386

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                +    T+N L+ G C+  +++ A ++   +   G   ++  CS +IH L +    
Sbjct: 387 AMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGF 446

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
             A  ++  + + N   S+     L+ G  +    S+ + L  K+AA K + ++   S+ 
Sbjct: 447 VSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNA 506

Query: 581 VVDLLSKDKKYRECLNQFRHLL 602
           ++  L +     E     + +L
Sbjct: 507 LLHGLCERGNMEEVFEVLKQML 528



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 66/134 (49%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F+ M      P +  +T L+    K  Q D V S+   ++SNG+ P+     ++
Sbjct: 693 DEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIM 752

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK+G    A  +L  ++R+   P+TVT+N L  G C E  +    +   K N+   
Sbjct: 753 IDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLP 812

Query: 183 DPNVVTFNTLINGL 196
               +T+NTLI+ L
Sbjct: 813 LEEEITYNTLIHKL 826


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 259/537 (48%), Gaps = 39/537 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F+ +   +  P + ++  ++       ++D   SL +R    G  P +   N +
Sbjct: 325 DEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCI 384

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           + CL + G    A  +    +R    PN  T+N LI+ LC  G +  A ++   +     
Sbjct: 385 LTCLGRKGKVEEALRIHDE-MRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGL 443

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN++T N +I+ LC+ +    A  +F  + ++   +C PD  T+ S+IDGL + G VD 
Sbjct: 444 FPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK---VCSPDSRTFCSLIDGLGRRGRVDD 500

Query: 243 AKELLLQMKDRNINPNVITYNSLICGF--------------------CCVD--------- 273
           A  L  +M D +  PNV+ Y SLI  F                    C  D         
Sbjct: 501 AYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMD 560

Query: 274 ------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                 + ++ + LF E+   G+ PDV +++ +I+   K G   +  +L   M ++G++ 
Sbjct: 561 CVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHL 620

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D + YN+++DGFC  G++ +A +L   M +KG +  V +Y  +++   K  ++++A  L+
Sbjct: 621 DVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLF 680

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            E  S  +  +V+ Y++L+ G  +VG + +A  +++++    + P+S+T+   +D L K 
Sbjct: 681 EEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKA 740

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             + EA   FQ ++N KC     TY+ +INGLC + +   A   +  +Q +G  P+ +T 
Sbjct: 741 EEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITY 800

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           +TMI  L K G + +A  L    +A   VP    +  ++ G    NK     ++  +
Sbjct: 801 TTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEE 857



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 251/501 (50%), Gaps = 4/501 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    + M K K  P  +++T L+  L+   + D +++LF ++   G   ++ +   L+
Sbjct: 186 EAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLV 245

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
               + G    A  +L  +  + FT + V +N  I+     G++  A + F ++      
Sbjct: 246 RVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLV 305

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TLI  LC+ R    A++LFEE+       C   V  YN++I G    G  D+A
Sbjct: 306 PDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPC---VYAYNTMIMGYGSAGKFDEA 362

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL + K +   P+VI YN ++         +EA  +  EM  +   P++ T+N +I+ 
Sbjct: 363 YSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-PNLTTYNILIDM 421

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+++   ++ + M + G+ P+ +T N ++D  C   ++  A  +F+ +  K C  D
Sbjct: 422 LCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPD 481

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             ++  LI+   +  +V+DA  LY +ML     P+V+ Y +L+   F+ G   D  K+  
Sbjct: 482 SRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYK 541

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M      PD     +Y+D + K G V +   +F+ I+       + +Y+ LI+GL K G
Sbjct: 542 EMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAG 601

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
             +   KLF+ ++ +G   DV+  +T+I   CK G++DKA  LL +M+ K   P+ VT+ 
Sbjct: 602 FSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYG 661

Query: 544 TLLRGFVQNNKKSKVVVLLHK 564
           +++ G  + ++  +  +L  +
Sbjct: 662 SVVDGLAKIDRLDEAYMLFEE 682



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 246/497 (49%), Gaps = 41/497 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+   D M +   +P +T++ IL+ ML K  + +  + +   +   GLFP++  +N++
Sbjct: 395 EEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIM 453

Query: 123 INCLCK-MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I+ LCK   +     + LG   + C +P++ TF  LI+GL   GR+ +A  L++K+    
Sbjct: 454 IDRLCKAQKLDEACSIFLGLDHKVC-SPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSD 512

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PNVV + +LI    +        K+++EMV+     C PD++  NS +D + K G V+
Sbjct: 513 QIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRG---CSPDLMLLNSYMDCVFKAGEVE 569

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           K + L  ++K + + P+V +Y+ LI G       +E   LF EM + G+  DV+ +N +I
Sbjct: 570 KGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVI 629

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTY----------------------------- 332
           +  CK GK+DK  +LLE M  +G+ P  VTY                             
Sbjct: 630 DGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVD 689

Query: 333 ------NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
                 +SL+DGF  VGRI  A  +   ++ KG   + Y++N L++A  K +++++A   
Sbjct: 690 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVC 749

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           ++ M + +  P+ +TY+ +++GL  +     A     +MQ   + P++ T+ T I GL K
Sbjct: 750 FQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAK 809

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G V+EA  +F   +          YN +I GL    +   A  +F   + KG   +  T
Sbjct: 810 AGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKT 869

Query: 507 CSTMIHWLCKEGQMDKA 523
           C  ++  L K   +++A
Sbjct: 870 CVVLLDALHKADCLEQA 886



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 223/431 (51%), Gaps = 9/431 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP   +F  L+  L +  + D   SL++++  +   P++ V   LI    K G       
Sbjct: 479 SPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHK 538

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   ++    +P+ +  N  ++ +   G + +   LF+++      P+V +++ LI+GL 
Sbjct: 539 IYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV 598

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +   +    KLF EM  +   +   DV+ YN++IDG CK G VDKA +LL +MK + + P
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHL---DVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQP 655

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
            V+TY S++ G   +D   EA  LF E    GV  +VV ++++I+   K G++D+   +L
Sbjct: 656 TVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLIL 715

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E ++Q+G+ P++ T+N L+D       I  A+  F +M +  C  +  +Y+I+IN  C  
Sbjct: 716 EELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMI 775

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           +K   A   ++EM  + ++P+ ITY T+++GL + GN+ +A  L D+ + +  VPDS  +
Sbjct: 776 RKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACY 835

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC------KL 491
              I+GL      ++A  VF+  R   C +  +T   L++ L K   L+ A       + 
Sbjct: 836 NAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLRE 895

Query: 492 FHRLQHKGPIP 502
             + QH   +P
Sbjct: 896 MAKSQHATRLP 906



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 177/378 (46%), Gaps = 6/378 (1%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           +N  +  + RTRN     ++ EEM V  FG      V     ++    K   + +A  ++
Sbjct: 136 YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSV----ELVASFVKSHKLKEAFGVI 191

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M+     P    Y +LI      +       LF +M + G + +V  F  ++    ++
Sbjct: 192 EMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFARE 251

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G++D    LL+ M       D V YN  +D F  VG++  A + F  M ++G   D  +Y
Sbjct: 252 GRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTY 311

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             LI   CK +++++AV L+ E+   R  P V  YNT++ G    G   +A  L+++ + 
Sbjct: 312 TTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKR 371

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
              +P    +   +  L + G V EA+++   +R       + TYN LI+ LCK G L+ 
Sbjct: 372 KGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEA 430

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A K+   ++  G  P+++T + MI  LCK  ++D+A  + L ++ K C P   TFC+L+ 
Sbjct: 431 ALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLID 490

Query: 548 GFVQNNKKSKVVVLLHKM 565
           G  +  +      L  KM
Sbjct: 491 GLGRRGRVDDAYSLYEKM 508



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 1/200 (0%)

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN  L  + +  NL    +++++M +      +      +    K+  + EA  V + +R
Sbjct: 136 YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMR 195

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
             K       Y  LI  L    R      LFH++Q  G   +V   +T++    +EG++D
Sbjct: 196 KFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRID 255

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A  LL +M++ +     V +   +  F +  K        H+M A+ LV  D++ ++ +
Sbjct: 256 AALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT-L 314

Query: 582 VDLLSKDKKYRECLNQFRHL 601
           + +L K ++  E +  F  L
Sbjct: 315 IGVLCKARRLDEAVELFEEL 334


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 252/491 (51%), Gaps = 7/491 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA  FF     M  SP + ++ IL+ +  + KQ+D    L   +   G  PD+F    L
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFA 181
           IN L K G  S A  +   +     TP+   +N LI+G   +G I+ A+ ++++L    +
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFV 240
             PN+ ++N +INGLC+      + +++  M  NE G     D+ TY+++I GLC  G +
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ----DLYTYSTLIHGLCGSGNL 306

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D A  +  +M +  ++P+V+ YN+++ G+      +E   L+  M   G +  VV++N +
Sbjct: 307 DGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNIL 365

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I    ++ K+D+   + EL+ ++    D++TY  L+ G C  G +++A  +     +   
Sbjct: 366 IRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG 425

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             D ++Y+ +IN  C++ ++++   +  +M     +P+    N +++G  +   L DAL+
Sbjct: 426 DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALR 485

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
               M      P   T+ T I+GL K     EA  + + + +   +  + TY+ L+NGLC
Sbjct: 486 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC 545

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           +  +L  A  L+ +   KG  PDV   + +IH LC  G+++ A  L  +M+ + CVP+ V
Sbjct: 546 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLV 605

Query: 541 TFCTLLRGFVQ 551
           T  TL+ GF +
Sbjct: 606 THNTLMEGFYK 616



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 256/517 (49%), Gaps = 7/517 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           ++   AKN   D  + +F+R++   G  P +   N L+N L +      A          
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
             +PN  T+N LI   C + +  +A  L   +      P+V ++ TLIN L +      A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNS 264
           LKLF+EM  E G    PDV  YN +IDG  K G +  A E+  ++ K  ++ PN+ +YN 
Sbjct: 204 LKLFDEMP-ERGVT--PDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 260

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           +I G C    + E+  ++  M  N    D+ T++ +I+  C  G +D   R+ + M + G
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           V+PD V YN++++G+   GRI    EL+  M  +GCR  V SYNILI    ++ KV++A+
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAI 379

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            ++  +  +      +TY  L+ GL + G L  AL ++++ +      D+F +++ I+GL
Sbjct: 380 SIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 439

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C+ G + E   V   +    C+      N +ING  +  +L+ A + F  +  KG  P V
Sbjct: 440 CREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTV 499

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           VT +T+I+ L K  +  +A  L+ +M  K   P+ +T+  L+ G  Q  KK  + + L  
Sbjct: 500 VTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ-GKKLDMALNLWC 558

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            A EK    D+ + + ++  L    K  + L  +  +
Sbjct: 559 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 238/456 (52%), Gaps = 8/456 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K+G ++  +A+  FD M +   +P +  + IL+    K         
Sbjct: 183 DVFSYGTLINSLAKNGYMS--DALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE 240

Query: 103 LFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           +++RL     ++P++   N++IN LCK G    +F +  R+ ++    +  T++ LI+GL
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  G +  A R++K++      P+VV +NT++NG  R       L+L++ M  E    C+
Sbjct: 301 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG---CR 357

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
             VV+YN +I GL ++  VD+A  +   + +++   + +TY  L+ G C      +A  +
Sbjct: 358 -TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSI 416

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             E  +     D   +++MIN  C++G++D+V  +L+ M + G  P+    N++++GF  
Sbjct: 417 LEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVR 476

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             ++  A   F +MVSKGC   V +YN LIN   K ++  +A  L +EML +  +P++IT
Sbjct: 477 ASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMIT 536

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y+ L++GL Q   L  AL L  +       PD       I GLC +G V +A+Q++  ++
Sbjct: 537 YSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMK 596

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLF-HRLQ 496
             KC   + T+N L+ G  K+   + A K++ H LQ
Sbjct: 597 QRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 113/207 (54%), Gaps = 5/207 (2%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +++ ++  L +  + D V  +  ++  +G  P+  V N +IN   +      A    G +
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490

Query: 143 L-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           + + CF P  VT+N LINGL    R  EA  L K++      PN++T++ L+NGLC+ + 
Sbjct: 491 VSKGCF-PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
             +AL L+ + + +     KPDV  +N II GLC  G V+ A +L  +MK R   PN++T
Sbjct: 550 LDMALNLWCQALEKG---FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVT 606

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDN 288
           +N+L+ GF  V D++ A  ++  ++ +
Sbjct: 607 HNTLMEGFYKVRDFERASKIWDHILQS 633



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 83/155 (53%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+ FF  M+     P + ++  L+  L+K +++    +L K +   G  P++   +LL+
Sbjct: 482 DALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLM 541

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N LC+      A  +  + L   F P+    N +I+GLC+ G++ +A +L+ ++    C 
Sbjct: 542 NGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCV 601

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
           PN+VT NTL+ G  + R+   A K+++ ++  + +
Sbjct: 602 PNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSS 636


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 222/447 (49%), Gaps = 12/447 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +F++L+  L K  +    V  + ++      P+L  +NLL+  LC+ G    A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV-FACDPNVVTFNTLINGLC 197
              I   C +P+ +T N LING C    + +A  LF ++   FA  P   T+  +I   C
Sbjct: 61  FRGI--QC-SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNIN 256
           +      A +L EE      + C  DV+   S+  G CK   VD+A +LLL M + ++  
Sbjct: 118 KMDRLDQARQLLEE-----SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAK 172

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+++ +N +I GFC     +EA  +   ++  G  P+ VT+  +I+  CK G + +  +L
Sbjct: 173 PDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232

Query: 317 LELMIQRG--VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            +++  R     P+ VT+N+L+ G C   R+  A EL   M ++  R D ++Y  L++  
Sbjct: 233 FKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK  +  +   ++ EML E   PSV+TY TL+    + G+L DA ++I  M    + PD 
Sbjct: 293 CKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   ++GL +NG V  A + F+ I   +C      Y+ L+ G CK   +  A K +  
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVE 412

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +  +   PD  TC  ++  LCK G+ D
Sbjct: 413 MLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 215/405 (53%), Gaps = 14/405 (3%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN  TF+ LI GLC  GR+ EA   + ++    C PN+   N L+  LC+      A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLIC 267
           F       G  C P V+T N +I+G C+   +DKA EL  +M K+  + P   TY ++I 
Sbjct: 61  FR------GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIK 114

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR-GVN 326
            +C +D   +A+ L  E   +    DV+   ++    CK  ++D+  +LL  M+++    
Sbjct: 115 CYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAK 172

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD V +N ++ GFC  GR+  A E+  ++VS GC  +  +Y  LI+  CK   + +A+ L
Sbjct: 173 PDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232

Query: 387 YREMLSER---IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           ++ +LS R     P+V+T+N L+SGL +   L  A +L+ +M+  D+  D+FT+ T +DG
Sbjct: 233 FK-VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDG 291

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LCK G   E  +VF+ +    C   + TY  L++  CK G L+ A ++   +  KG  PD
Sbjct: 292 LCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPD 351

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           V T + ++  L + G++  A +    +  + C P  V +  L+RG
Sbjct: 352 VTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRG 396



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 61/141 (43%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++E    F+ M++   +P + ++T L+    K         + + + + G+ PD+    +
Sbjct: 298 TSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTV 357

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+  L + G    A     +ILR    P  V ++ L+ G C    + EA + + ++    
Sbjct: 358 LLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417

Query: 182 CDPNVVTFNTLINGLCRTRNT 202
             P+  T   L+  LC+   T
Sbjct: 418 LAPDPATCKLLVEMLCKRGRT 438


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/399 (33%), Positives = 213/399 (53%), Gaps = 6/399 (1%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +L  ++  N+Q       +  +   G  P++++ N+L++  CK+G    A +V   I R 
Sbjct: 196 LLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRR 255

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
              P+ V+FN LI+G C    + E   L   +      P+V T++ LINGLC+      A
Sbjct: 256 GLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEA 315

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
             LF+EM  E G +  P+ VT+ ++IDG CK G +D A      MKDR I P++ITYN+L
Sbjct: 316 NGLFDEMC-EMGLV--PNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNAL 372

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G C   D KEA+ L  EM+ NG +PD +TF  +++  CKDG MD    + + M++ G+
Sbjct: 373 INGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGI 432

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             D V + +L+ G C  GR+  A  +   M+S G + D  +Y ++I+  CK   V+    
Sbjct: 433 ELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAK 492

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L +EM  +   P V+TYN L++G  + G + +A  L+  M   +VVP+  TF   +DG C
Sbjct: 493 LLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHC 552

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           K+G  ++  ++F   +    +    +Y  L+N   K+ +
Sbjct: 553 KHGSSVD-FKIFNGEKGLVSDY--ASYTALVNESIKISK 588



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 203/371 (54%), Gaps = 7/371 (1%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+V  +N ++ G CK G V  A+ +  ++  R + P+V+++N+LI G+C   + +E   L
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              M    + PDV T++A+IN  CK+ ++++ N L + M + G+ P+ VT+ +L+DG C 
Sbjct: 284 KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCK 343

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G+I  A   F  M  +G R D+ +YN LIN  C+D  +++A  L  EM+    +P  IT
Sbjct: 344 HGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKIT 403

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           + TL+ G  + G++  AL++ D+M    +  D   F   I GLC++G V +A ++ + + 
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDML 463

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +   +    TY  +I+  CK G +K   KL   +Q  G +P VVT + +++  CK+GQM 
Sbjct: 464 SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMK 523

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A  LL  M     VP+++TF  LL G  ++       +       EK +VSD +  + +
Sbjct: 524 NAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIF----NGEKGLVSDYASYTAL 579

Query: 582 VDL---LSKDK 589
           V+    +SKD+
Sbjct: 580 VNESIKISKDQ 590



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 181/334 (54%)

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E  L++ D    PNV  +N L+ GFC + D   A+ +F E+   G++P VV+FN +I+  
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C+   +++   L  +M    ++PD  TY++L++G C   R+  A  LF  M   G   + 
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            ++  LI+  CK  K++ A+  +  M    IRP +ITYN L++GL + G+L +A KL+++
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNE 391

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  N   PD  TF T +DG CK+G +  A+++   +     EL    +  LI+GLC+ GR
Sbjct: 392 MIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGR 451

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           ++ A ++   +   G  PD  T + +I   CK+G +     LL +M+    VP  VT+  
Sbjct: 452 VRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNA 511

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
           L+ GF +  +     +LLH M   ++V +D++ +
Sbjct: 512 LMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFN 545



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 179/339 (52%), Gaps = 3/339 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  F IL+    K         +F  ++  GL P +   N LI+  C+       FV+
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +     +P+  T++ LINGLC E R+ EA  LF ++      PN VTF TLI+G C+
Sbjct: 284 KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCK 343

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                +AL+ FE M +      +PD++TYN++I+GLC+DG + +A++LL +M      P+
Sbjct: 344 HGKIDLALRNFEIMKDRG---IRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            IT+ +L+ G C   D   A  +   M++ G++ D V F A+I+  C+DG++    R+L+
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+  G  PD  TY  ++D FC  G +    +L   M   G    V +YN L+N  CK  
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQG 520

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           ++++A  L   ML+  + P+ IT+N LL G  + G+  D
Sbjct: 521 QMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD 559



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 172/321 (53%), Gaps = 5/321 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G++ +   V  FD + +    P + SF  L++   ++K  +    L   + S  + PD
Sbjct: 238 KIGDVMNARMV--FDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPD 295

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F  + LIN LCK      A  +   +      PN VTF  LI+G C  G+I  A R F+
Sbjct: 296 VFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFE 355

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      P+++T+N LINGLCR  +   A KL  EM+   G   KPD +T+ +++DG C
Sbjct: 356 IMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMI---GNGFKPDKITFTTLMDGCC 412

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           KDG +D A E+  +M +  I  + + + +LI G C     ++A+ +  +M+  G +PD  
Sbjct: 413 KDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDP 472

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+  CK G +    +LL+ M + G  P  VTYN+LM+GFC  G++  A+ L  +M
Sbjct: 473 TYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAM 532

Query: 356 VSKGCRHDVYSYNILINANCK 376
           ++     +  ++NIL++ +CK
Sbjct: 533 LNMEVVPNDITFNILLDGHCK 553



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 141/257 (54%), Gaps = 9/257 (3%)

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           E ++ ++  G   +VY +NIL++  CK   V +A  ++ E+    +RPSV+++NTL+SG 
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            +  N+ +   L   M+   + PD FT++  I+GLCK   V EA  +F  +    CE+ +
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM----CEMGL 327

Query: 470 E----TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                T+  LI+G CK G++  A + F  ++ +G  PD++T + +I+ LC++G + +A  
Sbjct: 328 VPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARK 387

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           LL +M      P ++TF TL+ G  ++      + +  +M  E + + D++ ++ ++  L
Sbjct: 388 LLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTA-LISGL 446

Query: 586 SKDKKYRECLNQFRHLL 602
            +D + R+     + +L
Sbjct: 447 CRDGRVRDAERMLKDML 463



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 42/94 (44%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+     P   ++T+++    K         L K +  +G  P +   N L+N  CK G 
Sbjct: 462 MLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQ 521

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
              A ++L  +L     PN +TFN L++G C  G
Sbjct: 522 MKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 239/491 (48%), Gaps = 7/491 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P+P   ++  L+  L +             +  +G  PD F  N LI   C+      A 
Sbjct: 125 PAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQ 184

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  ++    F+ + V++  LI G C  GR+ EA  LF++L      P++ T   L+ GL
Sbjct: 185 DLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGL 240

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C  R     L + ++M  E G   +P    Y +++D  C++   ++A+++L +M D  + 
Sbjct: 241 CDARRGEEGLYMLQKM-KELG--WRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLV 297

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P  +T  +++  +C       A  +F  M   G +P+V T+NAM+   C  GK+ K   L
Sbjct: 298 PCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMAL 357

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L+ M + GV PD VTYN L+ G C+ G I  A  L   M   G   D Y+YN+LI+A CK
Sbjct: 358 LDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCK 417

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             KV++A  L+  +    IRP+ +T+NT+++GL + G    A   ++KM      PD++T
Sbjct: 418 TGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYT 477

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++ +I+ LCK     E +     +     +     Y  +I+ L K      A +++ ++ 
Sbjct: 478 YSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMV 537

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G  PDVVT +T +   C EG++ +A +++++M+    +   + + TL+ G     K  
Sbjct: 538 SLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTD 597

Query: 557 KVVVLLHKMAA 567
             V +L  M  
Sbjct: 598 HAVTILKHMTG 608



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 213/479 (44%), Gaps = 7/479 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            A  +   M++    P   +F  L+    + +Q D    LF ++   G   D      LI
Sbjct: 147 HAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALI 206

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+ G    A      + R    P+  T   L+ GLC   R  E   + +K+      
Sbjct: 207 EGFCETGRVDEAL----ELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWR 262

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P    +  L++  CR +    A K+  EM +  G +  P  VT  ++++  C++G +  A
Sbjct: 263 PATRAYAALVDLWCREQKAEEAEKMLNEMFDN-GLV--PCAVTCTAVVNAYCREGRMSGA 319

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +   MK +   PNV TYN+++ GFC V    +A  L  +M + GV+PDVVT+N +I  
Sbjct: 320 VRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRG 379

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C DG ++   RLL LM   G+  D  TYN L+D  C  G++  A  LF  +  +G R +
Sbjct: 380 QCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPN 439

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             ++N +IN  CK  K + A     +M+S    P   TY+  +  L +     + L  ID
Sbjct: 440 SVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFID 499

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M   DV P +  +   ID L K      A +++  + +  C   + TY   +   C  G
Sbjct: 500 EMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEG 559

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           RL  A  +   ++  G I D +  +T+I      G+ D A  +L  M     +P+  TF
Sbjct: 560 RLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTF 618



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/545 (23%), Positives = 226/545 (41%), Gaps = 58/545 (10%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
             E +Y    M ++   P   ++  L+ +  + ++ +    +   +  NGL P       
Sbjct: 246 GEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTA 305

Query: 122 LINCLCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           ++N  C+ G  SGA  V   + L+ C  PN  T+N ++ G C  G++ +A  L  ++   
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGC-EPNVWTYNAMVQGFCNVGKVYKAMALLDQMREC 364

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
             +P+VVT+N LI G C   +   A +L   M    G     D  TYN +ID LCK G V
Sbjct: 365 GVEPDVVTYNLLIRGQCIDGHIESAFRLLRLME---GNGLAADQYTYNVLIDALCKTGKV 421

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE-MMDNGVQPDVVTFNA 299
           D+A  L   ++ R I PN +T+N++I G C    +  A C F+E M+  G  PD  T++ 
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVA-CTFLEKMVSAGCAPDTYTYSP 480

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
            I   CK     +    ++ M+Q+ V P TV Y  ++D          A  ++  MVS G
Sbjct: 481 FIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLG 540

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG------ 413
           C  DV +Y   + A C + ++ +A  +  EM    I    + YNTL+ G   +G      
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAV 600

Query: 414 ---------------------------------------------NLGDALKLIDKMQLN 428
                                                         L D  +L + M+ N
Sbjct: 601 TILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKN 660

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V   +  +   ++G  +   + E   +   ++     L  + Y  L+N  CK+     A
Sbjct: 661 SVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDA 720

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             L   +   G +P++++   ++     EGQ D+A ++   +  K     E+ +  ++ G
Sbjct: 721 WALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDG 780

Query: 549 FVQNN 553
            ++  
Sbjct: 781 LIRQG 785



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 185/467 (39%), Gaps = 54/467 (11%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M +    P + ++ +L+     +   ++   L + +  NGL  D +  N+LI
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLI 412

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G    A  +   +      PN+VTFN +INGLC  G+   A    +K+    C 
Sbjct: 413 DALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCA 472

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+  T++  I  LC+T+ +   L   +EM+ +     KP  V Y  +ID L K+     A
Sbjct: 473 PDTYTYSPFIENLCKTKGSREGLSFIDEMLQK---DVKPSTVNYTIVIDRLFKERNYGLA 529

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  QM     +P+V+TY + +  +C      EA+ + +EM   G+  D + +N +I+ 
Sbjct: 530 TRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589

Query: 304 NCKDGKMDK--------------------------------------------------- 312
           +   GK D                                                    
Sbjct: 590 HTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELAD 649

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
           V  L ELM +  V      Y ++++GF    R+     L   M       +   Y  L+N
Sbjct: 650 VFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVN 709

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             CK +   DA  L   M+     P++I+Y  LLSG    G    A ++   ++  +   
Sbjct: 710 CFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNT 769

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           D   +   IDGL + G       +   +   KC+   ETY  L   L
Sbjct: 770 DEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 6/324 (1%)

Query: 281 LFIEMMDNGVQ-PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
           LF  M  +G   P   T+NA+I   C+   +    R L LM++ G  PD  T+NSL+ G+
Sbjct: 115 LFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGY 174

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C   ++  A++LF  M  +G   D  SY  LI   C+  +V++A+ L+RE+     +P +
Sbjct: 175 CRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDM 230

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            T+  L+ GL       + L ++ KM+     P +  +A  +D  C+     EA ++   
Sbjct: 231 YTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNE 290

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           + +        T   ++N  C+ GR+  A ++F  ++ KG  P+V T + M+   C  G+
Sbjct: 291 MFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGK 350

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           + KA  LL  M      P  VT+  L+RG   +        LL  M    L  +D    +
Sbjct: 351 VYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGL-AADQYTYN 409

Query: 580 KVVDLLSKDKKYRECLNQFRHLLF 603
            ++D L K  K  E  + F  L +
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEY 433


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 128/383 (33%), Positives = 200/383 (52%), Gaps = 38/383 (9%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           F+  +   C+      A+KL +EM N+     KPDVVTYN +I+G+CK+G +D+A + L 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGS---KPDVVTYNVLINGICKEGRLDEAIKFLN 141

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M      PNVIT+N ++   C    W +A+ L  +M+  G  P VVTFN +IN+ C+ G
Sbjct: 142 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 201

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            + +   +LE M   G  P++++YN L+ GFC   ++ RA E    MVS+GC  D+ +YN
Sbjct: 202 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 261

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L+ A CKD KV+ AV +  ++ S+   P +ITYNT++ GL +VG    A+KL+D+M+  
Sbjct: 262 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 321

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            + PD  T+++ + GL + G V EA++ F  +          TYN ++ G          
Sbjct: 322 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG---------- 371

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
                                    LCK  Q D+A D L  M +K C P+E T+  L+ G
Sbjct: 372 -------------------------LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 406

Query: 549 FVQNNKKSKVVVLLHKMAAEKLV 571
                   + + LL+++ +  LV
Sbjct: 407 IAYEGLAKEALDLLNELCSRGLV 429



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 180/330 (54%), Gaps = 3/330 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+   D M      P + ++ +L+  + K  + D  +     + S G  P++   N++
Sbjct: 99  GQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII 158

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  +C  G    A  +L  +LR   +P+ VTFN LIN LC +G +  A  + +K+ +  C
Sbjct: 159 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 218

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +++N L++G C+ +    A++  + MV+     C PD+VTYN+++  LCKDG VD 
Sbjct: 219 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG---CYPDIVTYNTLLTALCKDGKVDV 275

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+L Q+  +  +P +ITYN++I G   V   + A  L  EM   G++PD++T++++++
Sbjct: 276 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 335

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              ++GK+D+  +    +   G+ P+ +TYNS+M G C   +  RA +    M+SK C+ 
Sbjct: 336 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 395

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLS 392
              +Y ILI     +   ++A+ L  E+ S
Sbjct: 396 TEATYTILIEGIAYEGLAKEALDLLNELCS 425



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 180/349 (51%), Gaps = 3/349 (0%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P   ++ F+  +    K       + L   + + G  PD+   N+LIN +CK G    A 
Sbjct: 78  PCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 137

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
             L  +      PN +T N ++  +C+ GR M+A +L   +    C P+VVTFN LIN L
Sbjct: 138 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 197

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           CR      A+ + E+M       C P+ ++YN ++ G CK+  +D+A E L  M  R   
Sbjct: 198 CRQGLLGRAIDILEKMPMHG---CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY 254

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+++TYN+L+   C       A  +  ++   G  P ++T+N +I+   K GK ++  +L
Sbjct: 255 PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKL 314

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L+ M ++G+ PD +TY+SL+ G    G++  A + F  +   G R +  +YN ++   CK
Sbjct: 315 LDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCK 374

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            ++ + A+     M+S+R +P+  TY  L+ G+   G   +AL L++++
Sbjct: 375 SRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 155/297 (52%), Gaps = 3/297 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+ F + M      P + +  I+L  +    ++     L   +   G  P +   N+L
Sbjct: 134 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 193

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN LC+ G+   A  +L ++     TPN++++N L++G C E ++  A      +    C
Sbjct: 194 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 253

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++VT+NTL+  LC+     VA+++  ++ ++    C P ++TYN++IDGL K G  ++
Sbjct: 254 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG---CSPVLITYNTVIDGLSKVGKTER 310

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +M+ + + P++ITY+SL+ G        EA   F ++   G++P+ +T+N+++ 
Sbjct: 311 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIML 370

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             CK  + D+    L  MI +   P   TY  L++G    G    A +L   + S+G
Sbjct: 371 GLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 138/262 (52%), Gaps = 1/262 (0%)

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C    + +A +L   M +KG + DV +YN+LIN  CK+ ++++A+     M S   +P+V
Sbjct: 93  CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           IT+N +L  +   G   DA KL+  M      P   TF   I+ LC+ G +  A+ + + 
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 212

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +    C     +YN L++G CK  ++  A +    +  +G  PD+VT +T++  LCK+G+
Sbjct: 213 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 272

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +D A ++L  + +K C P  +T+ T++ G  +  K  + + LL +M   K +  D+   S
Sbjct: 273 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM-RRKGLKPDIITYS 331

Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
            +V  LS++ K  E +  F  L
Sbjct: 332 SLVSGLSREGKVDEAIKFFHDL 353



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 105/193 (54%), Gaps = 3/193 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ + D M+     P + ++  LLT L K+ + D  V +  +L+S G  P L   N +
Sbjct: 239 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 298

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K+G T  A  +L  + R    P+ +T++ L++GL  EG++ EA + F  L     
Sbjct: 299 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGI 358

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +T+N+++ GLC++R T  A+     M+++    CKP   TY  +I+G+  +G   +
Sbjct: 359 RPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR---CKPTEATYTILIEGIAYEGLAKE 415

Query: 243 AKELLLQMKDRNI 255
           A +LL ++  R +
Sbjct: 416 ALDLLNELCSRGL 428



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%)

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           F+ Y+   CK   V +A+++   +RN   +  + TYN LING+CK GRL  A K  + + 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G  P+V+T + ++  +C  G+   A  LL DM  K C PS VTF  L+    +     
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 557 KVVVLLHKMAAEKLVVSDLS 576
           + + +L KM       + LS
Sbjct: 205 RAIDILEKMPMHGCTPNSLS 224


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 238/452 (52%), Gaps = 7/452 (1%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           N  ++N L+  LC  GR+ +A +LF ++   A  P+VVT+  LI+G C       A+KL 
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLL 314

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           +EMV   G + +P+   Y S++  LC  G++  A  ++  M  R +  +   Y +++ GF
Sbjct: 315 DEMVA--GGV-EPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGF 371

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C   D   A+  F EM   G+  D VT+  MIN  C+  ++++  +LL+ M  R ++ D 
Sbjct: 372 CNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDE 431

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTY  L+DG+C  G+++ A ++  +MV +G   +V +Y  L +  CK   V+ A  L  E
Sbjct: 432 VTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHE 491

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M ++ +  +  TYN+L++GL + G L  A++ +  M    + PD +T+ T ID LCK+G 
Sbjct: 492 MSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGD 551

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           +  A  + Q + +   +  I TYN L+NG C  GR++   KL   +  K   P+  T ++
Sbjct: 552 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNS 611

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           ++   C E  M    ++   M +++  P+E T+  L++G  +     + +    +M  + 
Sbjct: 612 LMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKG 671

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             ++  S S+ ++ LL+K KK+ E    F  +
Sbjct: 672 FRLTATSYSA-LIRLLNKKKKFVEARELFHDM 702



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 211/408 (51%), Gaps = 21/408 (5%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F+ +  +F+FL+  LC     + +A L ++L  +   P+    N +++ L        A+
Sbjct: 200 FSSDPASFDFLL--LC-----LPSAPLLRRLRQYGISPSPEACNAVLSRLPLDE----AI 248

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +LF+E+ ++       +V +YN ++  LC  G V  A++L  +M      P+V+TY  LI
Sbjct: 249 ELFQELPHK-------NVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILI 298

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C + + + A  L  EM+  GV+P+   + +++   C  G +    R++E M+QR V 
Sbjct: 299 HGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVI 358

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            D   Y +++ GFC  G +  AR  F  M  KG   D  +Y  +IN  C+  ++E+A  L
Sbjct: 359 LDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKL 418

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            +EM + R+    +TY  L+ G  + G + +A ++ + M    V P+  T+    DGLCK
Sbjct: 419 LQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCK 478

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G V  A ++   + N   EL   TYN LINGLCK G L+ A +    +      PDV T
Sbjct: 479 QGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYT 538

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            +T+I  LCK G +D+A+ LL +M  K   P+ VT+  L+ GF  + +
Sbjct: 539 YTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 586



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 212/436 (48%), Gaps = 6/436 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   FD   +M  +P + ++ IL+       + +  V L   + + G+ P+  V   ++
Sbjct: 277 DARQLFD---EMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVV 333

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC  G  S A  V+  +++     +   +  +++G C +G ++ A R F ++      
Sbjct: 334 ALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLA 393

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            + VT+ T+INGLCR      A KL +EM   +      D VTY  +IDG CK G + +A
Sbjct: 394 TDGVTYTTMINGLCRAVELEEAEKLLQEM---WARRLDVDEVTYTVLIDGYCKRGKMAEA 450

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ++   M  R + PNV+TY +L  G C   D + A  L  EM + G++ +  T+N++IN 
Sbjct: 451 FQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 510

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G +++  R +  M    + PD  TY +L+D  C  G + RA  L   M+ KG +  
Sbjct: 511 LCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPT 570

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +YN+L+N  C   +VE    L   ML + I P+  TYN+L+       N+    ++  
Sbjct: 571 IVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYK 630

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M+  DV P+  T+   I G CK   + EA+     +      L   +Y+ LI  L K  
Sbjct: 631 GMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKK 690

Query: 484 RLKTACKLFHRLQHKG 499
           +   A +LFH ++ +G
Sbjct: 691 KFVEARELFHDMRKEG 706



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 199/413 (48%), Gaps = 3/413 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV   D M+     P  T +T ++ +L         + + + +    +  D  +   +++
Sbjct: 310 AVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLS 369

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C  G    A      + R     + VT+  +INGLC    + EA +L +++     D 
Sbjct: 370 GFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDV 429

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + VT+  LI+G C+      A ++   MV        P+VVTY ++ DGLCK G V  A 
Sbjct: 430 DEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRG---VTPNVVTYTALTDGLCKQGDVQAAN 486

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           ELL +M ++ +  N  TYNSLI G C     ++A     +M    ++PDV T+  +I+  
Sbjct: 487 ELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDAL 546

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK G +D+ + LL+ M+ +G+ P  VTYN LM+GFC+ GR+   ++L   M+ K    + 
Sbjct: 547 CKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNA 606

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN L+   C +  ++    +Y+ M S  + P+  TYN L+ G  +  N+ +AL   D+
Sbjct: 607 ATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDE 666

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           M        + +++  I  L K    +EA ++F  +R        + Y+  I+
Sbjct: 667 MIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 221/476 (46%), Gaps = 10/476 (2%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D  + LF+ L       ++   N+L+  LC  G    A  +   +  +   P+ VT+  L
Sbjct: 245 DEAIELFQELPHK----NVCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGIL 297

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           I+G CA G +  A +L  ++     +PN   + +++  LC       AL++ E+MV    
Sbjct: 298 IHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKV 357

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
            +   D   Y +++ G C  G +  A+    +M+ + +  + +TY ++I G C   + +E
Sbjct: 358 IL---DEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEE 414

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A+ L  EM    +  D VT+  +I+  CK GKM +  ++   M+QRGV P+ VTY +L D
Sbjct: 415 AEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTD 474

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C  G +  A EL   M +KG   +  +YN LIN  CK   +E A+    +M +  ++P
Sbjct: 475 GLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKP 534

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            V TY TL+  L + G+L  A  L+ +M    + P   T+   ++G C +G V    ++ 
Sbjct: 535 DVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLL 594

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             +          TYN L+   C    +K+  +++  ++ +   P+  T + +I   CK 
Sbjct: 595 DWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKA 654

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
             M +A     +M  K    +  ++  L+R   +  K  +   L H M  E L   
Sbjct: 655 RNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAE 710



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 201/398 (50%), Gaps = 8/398 (2%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           TS+   L D+   G I+  +A+   + M++ K       +T +L+         +    F
Sbjct: 330 TSVVALLCDK---GWIS--DALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWF 384

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
             +   GL  D      +IN LC+      A  +L  +       + VT+  LI+G C  
Sbjct: 385 DEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKR 444

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           G++ EA ++   +      PNVVT+  L +GLC+  +   A +L  EM N+   +   + 
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL---NA 501

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
            TYNS+I+GLCK G++++A   +  M    + P+V TY +LI   C   D   A  L  E
Sbjct: 502 CTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQE 561

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+D G++P +VT+N ++N  C  G+++   +LL+ M+++ ++P+  TYNSLM  +C+   
Sbjct: 562 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENN 621

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +    E++  M S+    +  +YNILI  +CK + +++A+  + EM+ +  R +  +Y+ 
Sbjct: 622 MKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSA 681

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           L+  L +     +A +L   M+   +  +S  +  YID
Sbjct: 682 LIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 182/374 (48%), Gaps = 5/374 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G++ S  A  +FD M +   +    ++T ++  L +  + +    L + + +  L  D  
Sbjct: 375 GDLVS--ARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEV 432

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
              +LI+  CK G  + AF +   +++   TPN VT+  L +GLC +G +  A  L  ++
Sbjct: 433 TYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEM 492

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           +    + N  T+N+LINGLC+      A++   +M     A  KPDV TY ++ID LCK 
Sbjct: 493 SNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDT---ACLKPDVYTYTTLIDALCKS 549

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G +D+A  LL +M D+ I P ++TYN L+ GFC     +  K L   M++  + P+  T+
Sbjct: 550 GDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATY 609

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N+++   C +  M     + + M  R V P+  TYN L+ G C    +  A      M+ 
Sbjct: 610 NSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQ 669

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           KG R    SY+ LI    K +K  +A  L+ +M  E +      Y+  +   F   NL  
Sbjct: 670 KGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLES 729

Query: 418 ALKLIDKMQLNDVV 431
            L L D++    +V
Sbjct: 730 TLALCDELVEASIV 743


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 146/481 (30%), Positives = 234/481 (48%), Gaps = 15/481 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           +  M  +P   ++  +L  L   +Q++   +L   +  N   P+       I   C+ G+
Sbjct: 203 IASMPVAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGL 262

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L R+ +   TP+ V ++ L+NG   +GR+ +A  L   LN   C PN + +N 
Sbjct: 263 LDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIEL---LNGMLCKPNTICYNA 319

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
            + GLC  +      +L  EMV +    C P+  T++ +   LC++G VD A E+L QM 
Sbjct: 320 ALKGLCIAQRWEDVGQLIVEMVRKD---CLPNEATFSMLTSCLCQNGLVDCAMEVLEQMH 376

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                P+ + YN+LI  F       +A  L   M      PDV++FNA +   C+  + D
Sbjct: 377 KYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALKGLCRAERWD 433

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               L+  M++       +T+N L+D  C  GR++ A E+F  M   GC  D+ +Y+ LI
Sbjct: 434 DAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLI 493

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N   +   VE A+ L++ M     +P +  YN +L GL +     DA +LI  M   D  
Sbjct: 494 NGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCP 550

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  TF   I+ LC+ G V  A++VF+ +        I TYN LING  + GRL  A +L
Sbjct: 551 PNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRL 610

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              +  K   PD V+ ++ +  LC+  +  +A +++ +M    C P+EVTF    R FV 
Sbjct: 611 LSTMSCK---PDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYANRLFVP 667

Query: 552 N 552
           N
Sbjct: 668 N 668



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 233/452 (51%), Gaps = 15/452 (3%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LIN  C+ G  + A  ++  +      P+T T+N ++ GLC   +  +A  L  ++    
Sbjct: 186 LINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNH 242

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C PN VTF T I   C+      A++L + M  ++G  C PDVV Y+++++G  + G VD
Sbjct: 243 CPPNEVTFATQIRAFCQNGLLDRAVQLLDRM-PQYG--CTPDVVIYSTLVNGFSEQGRVD 299

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A ELL  M      PN I YN+ + G C    W++   L +EM+     P+  TF+ + 
Sbjct: 300 DAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLT 356

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C++G +D    +LE M + G  PD V YN+L+  F   GR+  A +L  SM    C 
Sbjct: 357 SCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP---CS 413

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            DV S+N  +   C+ ++ +DA  L  +ML E      +T+N L+  L Q G + +A+++
Sbjct: 414 PDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEV 473

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            ++M      PD  T+++ I+GL + G V  A+++FQ++    C+  I  YN ++ GLC+
Sbjct: 474 FEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCR 530

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             R + A +L   +  K   P+ +T + +I+ LC++G +D+A ++   M      P   T
Sbjct: 531 AARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFT 590

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           +  L+ GF +  +      LL  M+ +   VS
Sbjct: 591 YNALINGFSEQGRLDDARRLLSTMSCKPDAVS 622



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 216/421 (51%), Gaps = 25/421 (5%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           N VT+  LING C  GR+ +A  L   + V    P+  T+NT++ GLC  R    A  L 
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMPVA---PDTYTYNTVLMGLCGARQWEDAEALM 235

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            EMV      C P+ VT+ + I   C++G +D+A +LL +M      P+V+ Y++L+ GF
Sbjct: 236 AEMVRNH---CPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGF 292

Query: 270 C---CVDDWKEAKCLFIEMMDNGV--QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
                VDD        IE++ NG+  +P+ + +NA +   C   + + V +L+  M+++ 
Sbjct: 293 SEQGRVDD-------AIELL-NGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKD 344

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             P+  T++ L    C  G +  A E+   M   GCR D   YN LI +  +  +V+DA+
Sbjct: 345 CLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDAL 404

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L   M      P VI++N  L GL +     DA +LI +M   D      TF   ID L
Sbjct: 405 KLLNSMPCS---PDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSL 461

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C+NG V  A++VF+ +    C   I TY+ LINGL + G +++A +LF  +  K   PD+
Sbjct: 462 CQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDI 518

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
              + ++  LC+  + + A +L+ +M  K+C P+E+TF  L+    Q     + + +  +
Sbjct: 519 FGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQ 578

Query: 565 M 565
           M
Sbjct: 579 M 579



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 181/416 (43%), Gaps = 50/416 (12%)

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           VV  N LI  LC  R     L   E +++   A    D V++N+++ G C+DG +  A E
Sbjct: 112 VVACNILIKKLCAQRR----LADAERVLDALKAAGAADPVSHNTLVAGYCRDGRLADA-E 166

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
            LL     +   NV+TY +LI G+C      +A  L   M    V PD  T+N ++   C
Sbjct: 167 RLLAAAGLSGAANVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLC 223

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
              + +    L+  M++    P+ VT+ + +  FC  G + RA +L   M   GC  DV 
Sbjct: 224 GARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVV 283

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            Y+ L+N   +  +V+DA+ L   ML    +P+ I YN  L GL       D  +LI +M
Sbjct: 284 IYSTLVNGFSEQGRVDDAIELLNGMLC---KPNTICYNAALKGLCIAQRWEDVGQLIVEM 340

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
              D +P+  TF+     LC+N                                   G +
Sbjct: 341 VRKDCLPNEATFSMLTSCLCQN-----------------------------------GLV 365

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A ++  ++   G  PD V  +T+I+   ++G++D A  LL  M    C P  ++F   
Sbjct: 366 DCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP---CSPDVISFNAA 422

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L+G  +  +      L+ +M  E   + +++ +  ++D L ++ +    +  F  +
Sbjct: 423 LKGLCRAERWDDAEELIVQMLREDCPLIEMTFNI-LIDSLCQNGRVNNAIEVFEQM 477


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 241/469 (51%), Gaps = 16/469 (3%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L  L +  + D  + L   ++ +G  P +   N+LI  LC  G  + A  V+  +  S  
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSA- 126

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
               +T+N ++NG C  G I  A R+   +  FA  P+  T+N LI  LC     L AL 
Sbjct: 127 --TIITYNTMVNGYCRAGNIDAARRMIDSVP-FA--PDTFTYNPLIRALCVRGCVLDALA 181

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +F++M++     C P VVTY+ ++D  CK+    +A  LL +M+ +   P+++TYN LI 
Sbjct: 182 VFDDMLHRG---CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
             C   D  EA  +   +   G +PD VT+  ++   C   + ++ ++LL  M      P
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D VT+N+++   C  G + RA ++   M   GC  D+ +Y+ +++  CK+++V++A+ L 
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 388 REMLSERIR----PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           +E+L+E +     P  +T+NT+++ L Q G    A+K++D+M  +  +PD  T+   +DG
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDG 418

Query: 444 -LCKNGFVLEAVQVFQ-AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            LCK+    EA+ +    + N  C     TY  L  GL +   ++ A  +F R+Q  G  
Sbjct: 419 FLCKSCKTEEALDLLNLMVSNGLCP-DTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLS 477

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           PD +  + ++  LCK+ + D A D    M +  C+P E T+  L+ G  
Sbjct: 478 PDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIA 526



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 227/454 (50%), Gaps = 14/454 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +    IL+  L  + +   V    + + + G    +   N ++N  C+ G    A  +
Sbjct: 94  PAVIPCNILIKKLCADGR---VADAERVVEALGPSATIITYNTMVNGYCRAGNIDAARRM 150

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  +    F P+T T+N LI  LC  G +++A  +F  +    C P+VVT++ L++  C+
Sbjct: 151 IDSVP---FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCK 207

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+ L +EM ++    C+PD+VTYN +I+ +C  G V +A ++L  +      P+
Sbjct: 208 ESGYKQAVVLLDEMRSKG---CEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPD 264

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +TY  ++   C  + W+EA  L  +M  N   PD VTFNA+I   C+ G + +  ++L 
Sbjct: 265 AVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLA 324

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRA----RELFVSMVSKGCRHDVYSYNILINAN 374
            M + G  PD +TY+S+MDG C   R+  A    +EL   MVSK C  D  ++N +I + 
Sbjct: 325 QMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSL 384

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG-LFQVGNLGDALKLIDKMQLNDVVPD 433
           C+    + A+ +  EM      P + TYN ++ G L +     +AL L++ M  N + PD
Sbjct: 385 CQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPD 444

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           + T+ +   GL +   +  A+ +F+ ++          YN ++ GLCK  R   A   F 
Sbjct: 445 TTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFA 504

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            +   G +PD  T   ++  +  EG +++A +LL
Sbjct: 505 YMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 190/368 (51%), Gaps = 8/368 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  FD M+    SP + +++ILL    K   Y   V L   + S G  PD+   N+LI
Sbjct: 178 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLI 237

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N +C  G    A  VL  +      P+ VT+  ++  LC+  R  EA +L  K+    C 
Sbjct: 238 NAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCA 297

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VTFN +I  LC+      A K+  +M +E G  C PD++TY+SI+DGLCK+  VD+A
Sbjct: 298 PDEVTFNAVITSLCQKGFVGRATKVLAQM-SEHG--CTPDIITYSSIMDGLCKERRVDEA 354

Query: 244 ----KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
               KELL +M  +N  P+ +T+N++I   C    +  A  +  EM ++G  PD+ T+N 
Sbjct: 355 IKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNC 414

Query: 300 MIN-YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           +++ + CK  K ++   LL LM+  G+ PDT TY SL  G      + RA  +F  + + 
Sbjct: 415 IVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAM 474

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   D   YN ++   CK  + + A+  +  M+S    P   TY  L+ G+   G L +A
Sbjct: 475 GLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEA 534

Query: 419 LKLIDKMQ 426
            +L+  + 
Sbjct: 535 KELLGNLS 542



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 212/423 (50%), Gaps = 18/423 (4%)

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N  + GL   G +  A RL   ++    DP V+  N LI  LC       A    E +V 
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADA----ERVVE 120

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
             G      ++TYN++++G C+ G +D A+ ++  +      P+  TYN LI   C    
Sbjct: 121 ALGP--SATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGC 175

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
             +A  +F +M+  G  P VVT++ +++  CK+    +   LL+ M  +G  PD VTYN 
Sbjct: 176 VLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNV 235

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++  C  G +  A ++  S+ S GC+ D  +Y  ++ + C  ++ E+A  L  +M S  
Sbjct: 236 LINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSND 295

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
             P  +T+N +++ L Q G +G A K++ +M  +   PD  T+++ +DGLCK   V EA+
Sbjct: 296 CAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAI 355

Query: 455 QVFQAI------RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
           ++ + +      +NC  +    T+N +I  LC+ G    A K+   +   G IPD+ T +
Sbjct: 356 KLLKELLAEMVSKNCIPDQV--TFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYN 413

Query: 509 TMIH-WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            ++  +LCK  + ++A DLL  M +    P   T+ +L  G  + ++  + + +  ++ A
Sbjct: 414 CIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQA 473

Query: 568 EKL 570
             L
Sbjct: 474 MGL 476



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 209/427 (48%), Gaps = 11/427 (2%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           + PS  + ++  ++    +    D    +   ++S    PD F  N LI  LC  G    
Sbjct: 122 LGPSATIITYNTMVNGYCRAGNIDAARRM---IDSVPFAPDTFTYNPLIRALCVRGCVLD 178

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  V   +L    +P+ VT++ L++  C E    +A  L  ++    C+P++VT+N LIN
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
            +C   +   ALK+   + + +G  CKPD VTY  ++  LC     ++A +LL +M   +
Sbjct: 239 AMCSQGDVGEALKVLNSLPS-YG--CKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSND 295

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK-- 312
             P+ +T+N++I   C       A  +  +M ++G  PD++T++++++  CK+ ++D+  
Sbjct: 296 CAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAI 355

Query: 313 --VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
             +  LL  M+ +   PD VT+N+++   C  G   RA ++   M   GC  D+ +YN +
Sbjct: 356 KLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCI 415

Query: 371 INAN-CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           ++   CK  K E+A+ L   M+S  + P   TY +L  GL +   +  A+ +  ++Q   
Sbjct: 416 VDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMG 475

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + PD   +   + GLCK      A+  F  + +  C     TY  L+ G+   G L+ A 
Sbjct: 476 LSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAK 535

Query: 490 KLFHRLQ 496
           +L   L 
Sbjct: 536 ELLGNLS 542



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 201/417 (48%), Gaps = 15/417 (3%)

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N  + GL +      AL+L   +    G+   P V+  N +I  LC DG V  A+ ++  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSIS---GSGKDPAVIPCNILIKKLCADGRVADAERVVEA 121

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDG 308
           +     +  +ITYN+++ G+C   +   A+     M+D+    PD  T+N +I   C  G
Sbjct: 122 L---GPSATIITYNTMVNGYCRAGNIDAAR----RMIDSVPFAPDTFTYNPLIRALCVRG 174

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            +     + + M+ RG +P  VTY+ L+D  C      +A  L   M SKGC  D+ +YN
Sbjct: 175 CVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYN 234

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           +LINA C    V +A+ +   + S   +P  +TY  +L  L       +A KL+ KM  N
Sbjct: 235 VLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSN 294

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
           D  PD  TF   I  LC+ GFV  A +V   +    C   I TY+ +++GLCK  R+  A
Sbjct: 295 DCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEA 354

Query: 489 CKLFHRL----QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
            KL   L      K  IPD VT +T+I  LC++G  D+A  ++ +M    C+P   T+  
Sbjct: 355 IKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNC 414

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           ++ GF+  + K++  + L  +     +  D +    +   LS++ +    +  FR +
Sbjct: 415 IVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRV 471



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 56/117 (47%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + EA+   + M+     P  T++  L   L++  + +  + +F+R+ + GL PD  + N 
Sbjct: 426 TEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNA 485

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           ++  LCK   T  A      ++ +   P+  T+  L+ G+  EG + EA  L   L+
Sbjct: 486 ILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLS 542


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 262/543 (48%), Gaps = 39/543 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+Y +D M      P + ++T ++  L K+ + +   S+F+ +   G+ P+ F    LI
Sbjct: 105 DALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLI 164

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L K G  + AFV+ GR++      + V +  L++GL   G    A  +F+ L   +  
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VT++ LI+G C+  +      L +EM  +      P+V+ Y+SI+DG  K G +++A
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH---IFPNVIVYSSIVDGYTKKGLLNEA 281

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +++ +M  RNI PNV  Y +LI G+   D    A  LF EM   G++ +    ++ +N 
Sbjct: 282 MDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNN 341

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             + G+M++ + L + M+ RG+ PD V Y S+MDGF   G+ S A  +   M  K    D
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN+LIN   K  K E     +  M    + P   T+NT+++   + GNLG+ALKL++
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNG-------------------------FVLEA----- 453
           +M+   + P+S T    +  LC  G                          VL+A     
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520

Query: 454 -----VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
                + +   +     +L + TYN LI+  C++G ++ A  +F  +  KG + D++T +
Sbjct: 521 RADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYN 580

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +IH  C    + KA  +   M  +   P+  T+  LL G        +   L+++M   
Sbjct: 581 ALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKER 640

Query: 569 KLV 571
            LV
Sbjct: 641 GLV 643



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 252/521 (48%), Gaps = 7/521 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           ++G I+   AV   + M    P+P + ++  L+    K     T   L   ++   L P+
Sbjct: 29  RNGEIS--RAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPN 86

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI+  CK      A  +   +      P+ VT+  ++NGLC  G++ EA  +F+
Sbjct: 87  VITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR 146

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PN  ++ TLI+ L +  N   A  L   MV         DVV Y +++DGL 
Sbjct: 147 EMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF---DVVVYTALMDGLF 203

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G  + A+++   + + ++ PN +TY++LI G C + D  + + L  EM +  + P+V+
Sbjct: 204 KAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVI 263

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            ++++++   K G +++   ++  M+QR + P+   Y +L+DG+    +   A +LF  M
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            S+G   + +  +  +N   +  ++E+A  L+++M+S  + P  + Y +++ G F+ G  
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            DA  +  +M       D   +   I+GL K G   E+      +R         T+N +
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG-KYESESFHTGMRQLGLAPDSATFNTM 442

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           IN  CK G L  A KL + ++  G  P+ +TC+ ++  LC  G+++K  DLL DM     
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGF 502

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            P+  T   +L      ++++ V++ +H       V  DLS
Sbjct: 503 HPTPTTHKAVLDA-SSKSRRADVILHMHDQLVGMGVKLDLS 542



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 250/483 (51%), Gaps = 6/483 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+    +N +    V L + + + G  PD+   N L+N  CK+G    A  ++G I 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                PN +T+  LI+  C    + +A  ++ ++ V +  P+VVT+  ++NGLC++    
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  +F EM  E G +  P+  +Y ++ID L K+G V +A  L  +M  R I  +V+ Y 
Sbjct: 140 EAKSVFREM-EEVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +L+ G         A+ +F  +++  + P+ VT++A+I+ +CK G ++K   LL+ M ++
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            + P+ + Y+S++DG+   G ++ A ++   MV +    +V+ Y  LI+   K  +   A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + L++EM S  +  +    ++ ++ L + G + +A +L   M    ++PD   + + +DG
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR-LQHKGPIP 502
             K G   +A  + Q +        +  YN LINGL K+G+ ++    FH  ++  G  P
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES--FHTGMRQLGLAP 434

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D  T +TMI+  CKEG +  A  LL +M++    P+ +T   L++      +  K + LL
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 563 HKM 565
           + M
Sbjct: 495 NDM 497



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 253/521 (48%), Gaps = 16/521 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+     M++    P +  +  L+    K  Q    + LFK + S GL  + FV++  
Sbjct: 279 NEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSF 338

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N L + G    A  +   ++     P+ V +  +++G    G+  +A  + +++   + 
Sbjct: 339 VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS 398

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +VV +N LINGL +        + F   + + G    PD  T+N++I+  CK+G +  
Sbjct: 399 GFDVVAYNVLINGLFKLGK--YESESFHTGMRQLG--LAPDSATFNTMINAYCKEGNLGN 454

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +MK   + PN IT N L+   C   + ++   L  +M+  G  P   T  A+++
Sbjct: 455 ALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
            + K  + D +  + + ++  GV  D  TYN+L+  FC +G I RA  +F  M+ KG   
Sbjct: 515 ASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +YN LI+  C    ++ A  ++ +ML+E + P+V TYN LL GL     + +A  L+
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+   +VP++ T+   + G  K G + E V+++  +       +  TYN LI+   K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMI-HW--LCKEGQMDK---------ANDLLLDM 530
            ++  A +L   +Q +G  P+  T   +I  W  L K+ +++K         A  L  +M
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEM 754

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             K  +P E T   +     +  KK+    +L+K+  +K V
Sbjct: 755 NEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKTV 795



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 215/408 (52%), Gaps = 4/408 (0%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V  FN LI+G CR      A++L E M  E  A   PD+VTYN++++G CK G +  AK
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPA---PDIVTYNTLMNGFCKIGDLFTAK 72

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L+ ++   N+ PNVITY +LI  +C     ++A  ++ EM    + PDVVT+  ++N  
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK GK+++   +   M + GV P+  +Y +L+D     G ++ A  L   MV +G   DV
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y  L++   K     +A  +++ +L E + P+ +TY+ L+ G  ++G++     L+ +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+   + P+   +++ +DG  K G + EA+ V + +        +  Y  LI+G  K  +
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
              A  LF  ++ +G   +     + ++ L + G+M++A++L  DM ++  +P  V + +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           ++ GF +  K+S    +  +M  EK    D+   + +++ L K  KY 
Sbjct: 373 MMDGFFKAGKESDAFNIAQEM-TEKSSGFDVVAYNVLINGLFKLGKYE 419



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 159/284 (55%), Gaps = 4/284 (1%)

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++  V  FN +I+  C++G++ +   LLE M   G  PD VTYN+LM+GFC +G +  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   +       +V +Y  LI+A CK Q +EDA+ +Y EM  + + P V+TY  +++GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA--VQVFQAIRNCKCEL 467
            + G + +A  +  +M+   VVP+ F++AT ID L K G V EA  +Q    +R    ++
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            +  Y  L++GL K G    A  +F  L  +  +P+ VT S +I   CK G ++K   LL
Sbjct: 193 VV--YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            +ME K+  P+ + + +++ G+ +    ++ + ++ KM    ++
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNIL 294



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 174/348 (50%), Gaps = 1/348 (0%)

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           I  +V  +N LI G+C   +   A  L   M   G  PD+VT+N ++N  CK G +    
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           +L+  +    + P+ +TY +L+D +C    +  A  ++  M  K    DV +Y  ++N  
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK  KVE+A  ++REM    + P+  +Y TL+  LF+ GN+ +A  L  +M +  +  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             +   +DGL K G    A  +FQ +          TY+ LI+G CK+G +     L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           ++ K   P+V+  S+++    K+G +++A D++  M  +N +P+   + TL+ G+ + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +   + L  +M +  L  ++  + S  V+ L +  +  E    F+ ++
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDS-FVNNLKRSGRMEEADELFKDMM 359


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 162/497 (32%), Positives = 246/497 (49%), Gaps = 46/497 (9%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           GLFP+  + N LI+CLCK G+ + A   L R+ + C  PN V++N +I+G C + R +E 
Sbjct: 5   GLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHC-APNVVSYNIIIDGYC-KARNIEK 62

Query: 171 ARLF------------------------------KKLNVFA------CDPNVVTFNTLIN 194
           A  F                              K ++VFA      C+P++V FN L++
Sbjct: 63  ALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLS 122

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           GL R R    A +LF  M N  G  CKPDVVTYN++I GLCK   +D+A  LL +MK  +
Sbjct: 123 GLWRARKIHEARELFRSM-NSRG--CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           ++P  +TY +LI   C     ++A  +F +M +         ++ + N   + GK+ + +
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFC-LVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           R+   M ++ V     TY+ ++ G   + G    A +L   M+ K    D Y+Y+ILIN 
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILING 299

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK ++  +A  +++EM    I P+V+TYNTLL GL     L DA++L   M     +PD
Sbjct: 300 LCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPD 359

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           + ++   I G C NG   EA  +FQ +      L   TYN +I G  K     +A  LF 
Sbjct: 360 TCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFK 419

Query: 494 RLQH----KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           R+Q     K P P++ T   +I  LCK  Q+++A  LL  M  K  VPS   +  LL   
Sbjct: 420 RMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRL 479

Query: 550 VQNNKKSKVVVLLHKMA 566
            +  +      L  +M+
Sbjct: 480 ARAGRLDDAFELYKEMS 496



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 224/430 (52%), Gaps = 7/430 (1%)

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +L +   PN + +N LI+ LC  G + EA    K++    C PNVV++N +I+G C+ RN
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              AL    EM  E G    P    Y+SI+   CK G V KA ++  +M  +   P+++ 
Sbjct: 60  IEKALAFLREM-EELGHPPTPHA--YSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVN 116

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +N L+ G        EA+ LF  M   G +PDVVT+N MI   CK  K+D+   LLE M 
Sbjct: 117 FNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMK 176

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           Q  V+P  VTY +L+D  C   R+ +A E+F  M    C     +Y++L N   +  K+ 
Sbjct: 177 QEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLV 236

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQV--GNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +A  +Y +M  + +  +  TY+ ++ GL ++  GN+ +A KL+ +M    + PD + ++ 
Sbjct: 237 EASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNV-EAAKLVTEMMGKKIAPDFYAYSI 295

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+GLCK     EA ++FQ +R       + TYN L+ GL    +L+ A +L + +  +G
Sbjct: 296 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQG 355

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            +PD  + + MI   C  G  ++A  L  DM     V +  T+  ++ GF+++   S   
Sbjct: 356 RLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAW 415

Query: 560 VLLHKMAAEK 569
           +L  +M + K
Sbjct: 416 MLFKRMQSGK 425



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 241/528 (45%), Gaps = 43/528 (8%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + S+ I++    K +  +  ++  + +   G  P     + ++   CK G  S A  
Sbjct: 41  APNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMD 100

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V   +      P+ V FN L++GL    +I EA  LF+ +N   C P+VVT+NT+I GLC
Sbjct: 101 VFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLC 160

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD----- 252
           + +    A+ L E M  E      P  VTY ++ID LCK   + +A E+  +M +     
Sbjct: 161 KWKKLDEAVFLLERMKQE---DVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCAC 217

Query: 253 ------------------------------RNINPNVITYNSLICGFCCVDDWK-EAKCL 281
                                         +N+     TY+ ++ G   +D    EA  L
Sbjct: 218 TEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKL 277

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             EMM   + PD   ++ +IN  CK  +  +   + + M  RG++P  VTYN+L++G   
Sbjct: 278 VTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLS 337

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
             ++  A EL   M+ +G   D  SYN++I   C +    +A CL+++M+ + I  +  T
Sbjct: 338 TAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWT 397

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQL--NDVVP--DSFTFATYIDGLCKNGFVLEAVQVF 457
           YN ++ G  +      A  L  +MQ   ND VP  + FT+   I  LCK   V EA ++ 
Sbjct: 398 YNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLL 457

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
            A+R+      ++ +  L++ L + GRL  A +L+  +        V + + ++  + + 
Sbjct: 458 SAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRR 517

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           G +D+A D L  M     VP + T+  L+ G     K  +   L+ ++
Sbjct: 518 GSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 565



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 245/511 (47%), Gaps = 22/511 (4%)

Query: 25  SFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSF 84
             G PP P      H +      +  +    K+GN++  +A+  F  M      P + +F
Sbjct: 72  ELGHPPTP------HAY------SSIVQSFCKTGNVS--KAMDVFAEMPAKGCEPDIVNF 117

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
            +LL+ L + ++      LF+ +NS G  PD+   N +I  LCK      A  +L R+ +
Sbjct: 118 NVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQ 177

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
              +P  VT+  LI+ LC   R+ +A  +F+K+    C      ++ L N L R    + 
Sbjct: 178 EDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVE 237

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK-DGFVDKAKELLLQMKDRNINPNVITYN 263
           A +++ +M  +   +C  D  TY+ ++ GL K DG   +A +L+ +M  + I P+   Y+
Sbjct: 238 ASRVYSDMCRK--NVCMTDN-TYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYS 294

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            LI G C      EAK +F EM   G+ P VVT+N ++       K+     L   M+ +
Sbjct: 295 ILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQ 354

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G  PDT +YN ++ GFC  G  + A  LF  M+  G   + ++YN +I    KD+    A
Sbjct: 355 GRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSA 414

Query: 384 VCLYREMLSER----IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
             L++ M S +      P++ TY  L+S L +   + +A KL+  M+    VP    +  
Sbjct: 415 WMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEV 474

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +  L + G + +A ++++ +    C+  + + N L++G+ + G +  A     ++   G
Sbjct: 475 LLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTG 534

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            +PD  T   ++  LC +G+ D+A  L+ ++
Sbjct: 535 IVPDKFTYDKLVVGLCWQGKADQARKLVEEL 565



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 121/518 (23%), Positives = 210/518 (40%), Gaps = 82/518 (15%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M      P + ++  ++  L K K+ D  V L +R+    + P       L
Sbjct: 131 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 190

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           I+ LCK      A+ V  ++           ++ L N L   G+++EA+R++  +     
Sbjct: 191 IDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNV 250

Query: 178 --------------------NVFACD-----------PNVVTFNTLINGLCRTRNTLVAL 206
                               NV A             P+   ++ LINGLC+ R    A 
Sbjct: 251 CMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAK 310

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           ++F+EM    G    P VVTYN++++GL     +  A EL   M D+   P+  +YN +I
Sbjct: 311 EMFQEMR---GRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMI 367

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGV------------------------------------ 290
            GFC   D  EA CLF +M+ +G+                                    
Sbjct: 368 RGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKND 427

Query: 291 ---QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
               P++ T+  +I+  CK  ++++  +LL  M  +G  P    +  L+      GR+  
Sbjct: 428 KVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDD 487

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A EL+  M    C+  V S NIL++   +   V++A    ++M    I P   TY+ L+ 
Sbjct: 488 AFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVV 547

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GL   G    A KL++++  +   P++      +  LC  G    A + +  + +   E+
Sbjct: 548 GLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEV 607

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
            +  +N L+   C    L         ++ +  +PDV+
Sbjct: 608 TLGMHNTLVTSCC----LARKLDYLDMIEQREGVPDVI 641



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 181/409 (44%), Gaps = 10/409 (2%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
            GN+   EA      M+  K +P   +++IL+  L K ++      +F+ +   G+ P +
Sbjct: 269 GGNV---EAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTV 325

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              N L+  L        A  +   +L     P+T ++N +I G CA G   EA  LF+ 
Sbjct: 326 VTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQD 385

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGAICKPDVVTYNSIIDGLC 235
           +       N  T+N +I G  +      A  LF+ M + +   +  P++ TY  +I  LC
Sbjct: 386 MIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLC 445

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K   V++A +LL  M+D+   P++  +  L+          +A  L+ EM     Q  V 
Sbjct: 446 KTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG 505

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           + N +++   + G +D+    L+ M   G+ PD  TY+ L+ G C  G+  +AR+L   +
Sbjct: 506 SSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 565

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           V  G R +      L+ A C     + A   Y  + S  +  ++  +NTL++       L
Sbjct: 566 VRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCC----L 621

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
              L  +D ++  + VPD       I+      F  E V++++  R+ K
Sbjct: 622 ARKLDYLDMIEQREGVPD--VIVERIEKFRAELFREEEVKIYEETRDRK 668


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 242/494 (48%), Gaps = 7/494 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           ++ + A+ +  +   ++F  +++ G++PD      +I   C+ G    A   +  ++   
Sbjct: 215 IILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERG 274

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F  +  T   +I   C +  +  A   F K+      PN++ ++++I+GLC+  +   A 
Sbjct: 275 FVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAF 334

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSL 265
           +L EEMV       KP+V T+ S+I GLCK G+ ++A  L L++ +  N  PNV TY ++
Sbjct: 335 ELLEEMVKNG---WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAM 391

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G+C  +    A+ LF  M + G+ P+  T+  +I+ +CK G   K   L+ELM   G 
Sbjct: 392 ISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGF 451

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P+T TYNS++DG C  GR   A +L  +        D  +Y ILI+  CK   +  A+ 
Sbjct: 452 FPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALV 511

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
              +M     +P +  Y TL++   +   + D+ KL D++    + P   T+ + I G C
Sbjct: 512 FLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYC 571

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           +   V  AV+ FQ + +  C     +Y  LI+GLCK  RL  A +L+  +  KG  P  V
Sbjct: 572 REKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEV 631

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T  T+ +  CK      A  +L  +  K  +    T  TL+R      K +   +  HK+
Sbjct: 632 TRVTLTYEYCKTEDFASAMVILERLNKKLWIR---TVHTLIRKLCCEKKVALAALFFHKL 688

Query: 566 AAEKLVVSDLSLSS 579
             +++ V  ++L++
Sbjct: 689 LDKEVNVDRVTLAA 702



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 188/364 (51%), Gaps = 4/364 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N AV+FF  + KM  SP + +++ +++ L K         L + +  NG  P+++    L
Sbjct: 296 NRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSL 355

Query: 123 INCLCKMGITSGAFVVLGRILRS-CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I+ LCK G T  AF +  +++RS  + PN  T+  +I+G C E ++  A  LF+++    
Sbjct: 356 IHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQG 415

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PN  T+ TLI+G C+  N   A +L E M NE G    P+  TYNSI+DGLCK G  +
Sbjct: 416 LVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNE-GFF--PNTCTYNSIVDGLCKRGRAE 472

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A +LL       I  + +TY  LI   C   D  +A     +M   G QPD+  +  +I
Sbjct: 473 EAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLI 532

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C+   M    +L + +I+ G+ P   TY S++ G+C   ++S A + F  M   GC 
Sbjct: 533 AAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCA 592

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  SY  LI+  CK+ ++++A  LY  M+ + + P  +T  TL     +  +   A+ +
Sbjct: 593 PDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVI 652

Query: 422 IDKM 425
           ++++
Sbjct: 653 LERL 656



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 203/429 (47%), Gaps = 7/429 (1%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            + T+++T   +    +  V  F ++   GL P+L   + +I+ LCK G    AF +L  
Sbjct: 280 ATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEE 339

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTR 200
           ++++ + PN  T   LI+GLC +G    A RLF KL       PNV T+  +I+G C+  
Sbjct: 340 MVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEE 399

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A  LFE M  E G +  P+  TY ++IDG CK G   KA EL+  M +    PN  
Sbjct: 400 KLSRAEMLFERM-KEQGLV--PNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTC 456

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TYNS++ G C     +EA  L      N ++ D VT+  +I+  CK   M++    L  M
Sbjct: 457 TYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKM 516

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            + G  PD   Y +L+  FC    +  + +LF  ++  G      +Y  +I   C+++KV
Sbjct: 517 FKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKV 576

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
             AV  +++M      P  I+Y  L+SGL +   L +A +L D M    + P   T  T 
Sbjct: 577 SLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTL 636

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
               CK      A+ + + +     +L I T + LI  LC   ++  A   FH+L  K  
Sbjct: 637 TYEYCKTEDFASAMVILERLNK---KLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEV 693

Query: 501 IPDVVTCST 509
             D VT + 
Sbjct: 694 NVDRVTLAA 702



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 160/327 (48%), Gaps = 1/327 (0%)

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N II    +   V+ A  +  +M  R + P+  TY  +I G+C   +  EA     EMM+
Sbjct: 213 NRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMME 272

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G   D  T   +I   C+   +++       + + G++P+ + Y+S++ G C  G + +
Sbjct: 273 RGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQ 332

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML-SERIRPSVITYNTLL 406
           A EL   MV  G + +VY++  LI+  CK    E A  L+ +++ S+  +P+V TY  ++
Sbjct: 333 AFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMI 392

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           SG  +   L  A  L ++M+   +VP++ T+ T IDG CK G   +A ++ + + N    
Sbjct: 393 SGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFF 452

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
               TYN +++GLCK GR + A KL +         D VT + +I   CK   M++A   
Sbjct: 453 PNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVF 512

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           L  M      P    + TL+  F + N
Sbjct: 513 LNKMFKVGFQPDIHLYTTLIAAFCRQN 539



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 162/329 (49%), Gaps = 9/329 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++T +++   K ++      LF+R+   GL P+      LI+  CK G  S A+ +
Sbjct: 383 PNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYEL 442

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  +    F PNT T+N +++GLC  GR  EA +L         + + VT+  LI+  C+
Sbjct: 443 MELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCK 502

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   AL    +M   F    +PD+  Y ++I   C+   +  +++L  ++    + P 
Sbjct: 503 RADMNQALVFLNKM---FKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPT 559

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             TY S+ICG+C       A   F +M D+G  PD +++ A+I+  CK+ ++D+  +L +
Sbjct: 560 KETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYD 619

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MI +G++P  VT  +L   +C     + A  +   +  K     V++   LI   C ++
Sbjct: 620 TMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHT---LIRKLCCEK 676

Query: 379 KVEDAVCLYREMLSERI---RPSVITYNT 404
           KV  A   + ++L + +   R ++  +NT
Sbjct: 677 KVALAALFFHKLLDKEVNVDRVTLAAFNT 705



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 152/296 (51%), Gaps = 1/296 (0%)

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           F  +   KEA  + ++M + G+       N +I    +   ++    + + M  RGV PD
Sbjct: 184 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 243

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           + TY  ++ G+C  G +  A      M+ +G   D  +  ++I A C+   V  AV  + 
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 303

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           ++    + P++I Y++++SGL + G++  A +L+++M  N   P+ +T  + I GLCK G
Sbjct: 304 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 363

Query: 449 FVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           +   A ++F + IR+   +  + TY  +I+G CK  +L  A  LF R++ +G +P+  T 
Sbjct: 364 WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 423

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +T+I   CK G   KA +L+  M  +   P+  T+ +++ G  +  +  +   LL+
Sbjct: 424 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLN 479



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 110/244 (45%), Gaps = 7/244 (2%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++TIL++   K    +  +    ++   G  PD+ +   LI   C+  +   +  +   +
Sbjct: 492 TYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 551

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           ++    P   T+  +I G C E ++  A + F+K++   C P+ +++  LI+GLC+    
Sbjct: 552 IKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRL 611

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A +L++ M+++  + C+   VT  ++    CK      A  +L ++   N    + T 
Sbjct: 612 DEARQLYDTMIDKGLSPCE---VTRVTLTYEYCKTEDFASAMVILERL---NKKLWIRTV 665

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           ++LI   CC      A   F +++D  V  D VT  A      +  K   V+ L E  I 
Sbjct: 666 HTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSE-RIS 724

Query: 323 RGVN 326
           +G+ 
Sbjct: 725 KGIG 728



 Score = 39.3 bits (90), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 60/137 (43%)

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + EAV +   +RN    L     N +I    +M  ++ A  +F  +  +G  PD  T 
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
             +I   C+ G + +A+  + +M  +  V    T   ++  F + +  ++ V   HK+  
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307

Query: 568 EKLVVSDLSLSSKVVDL 584
             L  + ++ SS +  L
Sbjct: 308 MGLSPNLINYSSMISGL 324


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 262/502 (52%), Gaps = 10/502 (1%)

Query: 39  HHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYD 98
           + F+D T   K LN   K+G  T  EA+YF + M+K    P +   T L+  L  +K+ +
Sbjct: 73  YDFRD-THHMKALNRLCKTGKYT--EALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTE 129

Query: 99  TVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLI 158
             V + + L   G  PD F  N +I+  C+      A  V+ R+    F+P+ VT+N LI
Sbjct: 130 KAVRVMEILEQYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILI 188

Query: 159 NGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
             LCA G++  A ++  +L    C+P V+T+  LI       +   A++L +EM++    
Sbjct: 189 GSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRG-- 246

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
             +PD+ TYN I+ G+CK G VD+A E +  +   N  P++  YN L+ G      W+  
Sbjct: 247 -LQPDMYTYNVIVRGMCKRGLVDRAFEFVSNL---NTTPSLNLYNLLLKGLLNEGRWEAG 302

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           + L  +M+  G +P++VT++ +I+  C+DGK  +   +L +M ++G+NPD   Y+ L+  
Sbjct: 303 ERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISA 362

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           FC  G++  A      M+S G   D+ +YN ++ + CK  + ++A+ +++++      P+
Sbjct: 363 FCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPN 422

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
             +YNT+   L+  G+   AL +I +M  N V PD  T+ + I  LC++G V EA+ +  
Sbjct: 423 ASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLV 482

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            +   + +  + +YN ++ GLCK  R+  A ++   +   G  P+  T + ++  +   G
Sbjct: 483 DMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAG 542

Query: 519 QMDKANDLLLDMEAKNCVPSEV 540
               A +L   + + N +  ++
Sbjct: 543 WRSYAVELAKSLVSMNAISQDL 564



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 218/443 (49%), Gaps = 7/443 (1%)

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G  + A   L ++++  + P+ +    LI GL    R  +A R+ + L  +  
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG- 142

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           DP+   +N +I+G CR+     A ++   M  ++     PDVVTYN +I  LC  G +D 
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRM--KYRGF-SPDVVTYNILIGSLCARGKLDL 199

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +++ Q+ + N NP VITY  LI          +A  L  EMM  G+QPD+ T+N ++ 
Sbjct: 200 ALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVR 259

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G +D   R  E +      P    YN L+ G    GR      L   M+ KGC  
Sbjct: 260 GMCKRGLVD---RAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEP 316

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++ +Y++LI++ C+D K  +AV + R M  + + P    Y+ L+S   + G +  A+  +
Sbjct: 317 NIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFV 376

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D M     +PD   + T +  LCK G   EA+ +F+ +    C     +YN +   L   
Sbjct: 377 DDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSS 436

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G    A  +   +   G  PD +T +++I  LC++G +D+A  LL+DME     P+ +++
Sbjct: 437 GDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISY 496

Query: 543 CTLLRGFVQNNKKSKVVVLLHKM 565
             +L G  + ++    + +L  M
Sbjct: 497 NIVLLGLCKAHRIVDAIEVLAVM 519



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 38/201 (18%)

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLND 429
           +N  CK  K  +A+    +M+    +P VI    L+ GLF       A+++++ + Q  D
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD 143

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
             PDSF                                    YN +I+G C+  R   A 
Sbjct: 144 --PDSFA-----------------------------------YNAVISGFCRSDRFDAAN 166

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++  R++++G  PDVVT + +I  LC  G++D A  ++  +   NC P+ +T+  L+   
Sbjct: 167 RVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEAT 226

Query: 550 VQNNKKSKVVVLLHKMAAEKL 570
           + +      + LL +M +  L
Sbjct: 227 IIHGSIDDAMRLLDEMMSRGL 247


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 242/494 (48%), Gaps = 7/494 (1%)

Query: 87   LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
            ++ + A+ +  +   ++F  +++ G++PD      +I   C+ G    A   +  ++   
Sbjct: 802  IILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERG 861

Query: 147  FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
            F  +  T   +I   C +  +  A   F K+      PN++ ++++I+GLC+  +   A 
Sbjct: 862  FVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAF 921

Query: 207  KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSL 265
            +L EEMV       KP+V T+ S+I GLCK G+ ++A  L L++ +  N  PNV TY ++
Sbjct: 922  ELLEEMVKNG---WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAM 978

Query: 266  ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
            I G+C  +    A+ LF  M + G+ P+  T+  +I+ +CK G   K   L+ELM   G 
Sbjct: 979  ISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGF 1038

Query: 326  NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             P+T TYNS++DG C  GR   A +L  +        D  +Y ILI+  CK   +  A+ 
Sbjct: 1039 FPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALV 1098

Query: 386  LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
               +M     +P +  Y TL++   +   + D+ KL D++    + P   T+ + I G C
Sbjct: 1099 FLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYC 1158

Query: 446  KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
            +   V  AV+ FQ + +  C     +Y  LI+GLCK  RL  A +L+  +  KG  P  V
Sbjct: 1159 REKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEV 1218

Query: 506  TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            T  T+ +  CK      A  +L  +  K  +    T  TL+R      K +   +  HK+
Sbjct: 1219 TRVTLTYEYCKTEDFASAMVILERLNKKLWIR---TVHTLIRKLCCEKKVALAALFFHKL 1275

Query: 566  AAEKLVVSDLSLSS 579
              +++ V  ++L++
Sbjct: 1276 LDKEVNVDRVTLAA 1289



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 188/364 (51%), Gaps = 4/364 (1%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            N AV+FF  + KM  SP + +++ +++ L K         L + +  NG  P+++    L
Sbjct: 883  NRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSL 942

Query: 123  INCLCKMGITSGAFVVLGRILRS-CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            I+ LCK G T  AF +  +++RS  + PN  T+  +I+G C E ++  A  LF+++    
Sbjct: 943  IHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQG 1002

Query: 182  CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              PN  T+ TLI+G C+  N   A +L E M NE G    P+  TYNSI+DGLCK G  +
Sbjct: 1003 LVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNE-GFF--PNTCTYNSIVDGLCKRGRAE 1059

Query: 242  KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            +A +LL       I  + +TY  LI   C   D  +A     +M   G QPD+  +  +I
Sbjct: 1060 EAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLI 1119

Query: 302  NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
               C+   M    +L + +I+ G+ P   TY S++ G+C   ++S A + F  M   GC 
Sbjct: 1120 AAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCA 1179

Query: 362  HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             D  SY  LI+  CK+ ++++A  LY  M+ + + P  +T  TL     +  +   A+ +
Sbjct: 1180 PDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVI 1239

Query: 422  IDKM 425
            ++++
Sbjct: 1240 LERL 1243



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 202/426 (47%), Gaps = 7/426 (1%)

Query: 82   TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
             + T+++T   +    +  V  F ++   GL P+L   + +I+ LCK G    AF +L  
Sbjct: 867  ATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEE 926

Query: 142  ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTR 200
            ++++ + PN  T   LI+GLC +G    A RLF KL       PNV T+  +I+G C+  
Sbjct: 927  MVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEE 986

Query: 201  NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
                A  LFE M  E G +  P+  TY ++IDG CK G   KA EL+  M +    PN  
Sbjct: 987  KLSRAEMLFERM-KEQGLV--PNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTC 1043

Query: 261  TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            TYNS++ G C     +EA  L      N ++ D VT+  +I+  CK   M++    L  M
Sbjct: 1044 TYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKM 1103

Query: 321  IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
             + G  PD   Y +L+  FC    +  + +LF  ++  G      +Y  +I   C+++KV
Sbjct: 1104 FKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKV 1163

Query: 381  EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
              AV  +++M      P  I+Y  L+SGL +   L +A +L D M    + P   T  T 
Sbjct: 1164 SLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTL 1223

Query: 441  IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
                CK      A+ + + +     +L I T + LI  LC   ++  A   FH+L  K  
Sbjct: 1224 TYEYCKTEDFASAMVILERLNK---KLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEV 1280

Query: 501  IPDVVT 506
              D VT
Sbjct: 1281 NVDRVT 1286



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 185/381 (48%), Gaps = 6/381 (1%)

Query: 222  PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
            PD  TY  II G C++G V +A   + +M +R    +  T   +I  FC       A   
Sbjct: 829  PDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWF 888

Query: 282  FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
            F ++   G+ P+++ +++MI+  CK G + +   LLE M++ G  P+  T+ SL+ G C 
Sbjct: 889  FHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCK 948

Query: 342  VGRISRARELFVSMV-SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G   RA  LF+ ++ S   + +V++Y  +I+  CK++K+  A  L+  M  + + P+  
Sbjct: 949  KGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTN 1008

Query: 401  TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            TY TL+ G  + GN   A +L++ M      P++ T+ + +DGLCK G   EA ++    
Sbjct: 1009 TYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTG 1068

Query: 461  RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
               + E    TY  LI+  CK   +  A    +++   G  PD+   +T+I   C++  M
Sbjct: 1069 FQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMM 1128

Query: 521  DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
              +  L  ++      P++ T+ +++ G+ +  K S  V    KM+        +S  + 
Sbjct: 1129 KDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGAL 1188

Query: 581  VVDLLSKDKKYRECLNQFRHL 601
            +  L  + +     L++ R L
Sbjct: 1189 ISGLCKESR-----LDEARQL 1204



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 160/327 (48%), Gaps = 1/327 (0%)

Query: 228  NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
            N II    +   V+ A  +  +M  R + P+  TY  +I G+C   +  EA     EMM+
Sbjct: 800  NRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMME 859

Query: 288  NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
             G   D  T   +I   C+   +++       + + G++P+ + Y+S++ G C  G + +
Sbjct: 860  RGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQ 919

Query: 348  ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML-SERIRPSVITYNTLL 406
            A EL   MV  G + +VY++  LI+  CK    E A  L+ +++ S+  +P+V TY  ++
Sbjct: 920  AFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMI 979

Query: 407  SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            SG  +   L  A  L ++M+   +VP++ T+ T IDG CK G   +A ++ + + N    
Sbjct: 980  SGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFF 1039

Query: 467  LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
                TYN +++GLCK GR + A KL +         D VT + +I   CK   M++A   
Sbjct: 1040 PNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVF 1099

Query: 527  LLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            L  M      P    + TL+  F + N
Sbjct: 1100 LNKMFKVGFQPDIHLYTTLIAAFCRQN 1126



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 162/329 (49%), Gaps = 9/329 (2%)

Query: 79   PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
            P + ++T +++   K ++      LF+R+   GL P+      LI+  CK G  S A+ +
Sbjct: 970  PNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYEL 1029

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            +  +    F PNT T+N +++GLC  GR  EA +L         + + VT+  LI+  C+
Sbjct: 1030 MELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCK 1089

Query: 199  TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
              +   AL    +M   F    +PD+  Y ++I   C+   +  +++L  ++    + P 
Sbjct: 1090 RADMNQALVFLNKM---FKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPT 1146

Query: 259  VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              TY S+ICG+C       A   F +M D+G  PD +++ A+I+  CK+ ++D+  +L +
Sbjct: 1147 KETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYD 1206

Query: 319  LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
             MI +G++P  VT  +L   +C     + A  +   +  K     V++   LI   C ++
Sbjct: 1207 TMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHT---LIRKLCCEK 1263

Query: 379  KVEDAVCLYREMLSERI---RPSVITYNT 404
            KV  A   + ++L + +   R ++  +NT
Sbjct: 1264 KVALAALFFHKLLDKEVNVDRVTLAAFNT 1292



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 152/296 (51%), Gaps = 1/296 (0%)

Query: 269  FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            F  +   KEA  + ++M + G+       N +I    +   ++    + + M  RGV PD
Sbjct: 771  FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 830

Query: 329  TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            + TY  ++ G+C  G +  A      M+ +G   D  +  ++I A C+   V  AV  + 
Sbjct: 831  SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890

Query: 389  EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            ++    + P++I Y++++SGL + G++  A +L+++M  N   P+ +T  + I GLCK G
Sbjct: 891  KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 950

Query: 449  FVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
            +   A ++F + IR+   +  + TY  +I+G CK  +L  A  LF R++ +G +P+  T 
Sbjct: 951  WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 1010

Query: 508  STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            +T+I   CK G   KA +L+  M  +   P+  T+ +++ G  +  +  +   LL+
Sbjct: 1011 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLN 1066



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 109/243 (44%), Gaps = 7/243 (2%)

Query: 83   SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
            ++TIL++   K    +  +    ++   G  PD+ +   LI   C+  +   +  +   +
Sbjct: 1079 TYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 1138

Query: 143  LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
            ++    P   T+  +I G C E ++  A + F+K++   C P+ +++  LI+GLC+    
Sbjct: 1139 IKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRL 1198

Query: 203  LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
              A +L++ M+++  + C+   VT  ++    CK      A  +L ++   N    + T 
Sbjct: 1199 DEARQLYDTMIDKGLSPCE---VTRVTLTYEYCKTEDFASAMVILERL---NKKLWIRTV 1252

Query: 263  NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            ++LI   CC      A   F +++D  V  D VT  A  N  C +     +   L   I 
Sbjct: 1253 HTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTL-AAFNTACIESNKYALVSDLSERIS 1311

Query: 323  RGV 325
            +G+
Sbjct: 1312 KGI 1314



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 60/137 (43%)

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + EAV +   +RN    L     N +I    +M  ++ A  +F  +  +G  PD  T 
Sbjct: 775 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 834

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
             +I   C+ G + +A+  + +M  +  V    T   ++  F + +  ++ V   HK+  
Sbjct: 835 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 894

Query: 568 EKLVVSDLSLSSKVVDL 584
             L  + ++ SS +  L
Sbjct: 895 MGLSPNLINYSSMISGL 911


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 244/518 (47%), Gaps = 21/518 (4%)

Query: 61  TSNEAVYFFDCMIKMK----PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           +  +AV  FD +   +    P+P   +F  L+   +   ++   V  F R+      P  
Sbjct: 121 SEPDAVAMFDALADARAAGLPAPS-AAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTA 179

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           FV N +   L   G+   A  +  R++ S   PN+ T+  L++GLC  G  ++A ++F +
Sbjct: 180 FVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDE 239

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      P+V  +  L++ LC       A +L   M  E G  C PD VTY   + GLCK
Sbjct: 240 MLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSM-KENG--CPPDEVTYTVFLSGLCK 296

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G VD+A      ++D      +I Y+ LI G      + E    + EM+   + PD+  
Sbjct: 297 AGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITL 356

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +I    + G+      LL+ M  +G  PDT  YN+L+     VG I RA+ L   M+
Sbjct: 357 YTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEML 416

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
                 D  ++NI+I   CK   ++ A+ ++ EM      P+V+TYN L+ GL++ G L 
Sbjct: 417 QNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLE 476

Query: 417 DALKLIDKMQLND-------------VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +A  L  KM++ +              V D+ +    +DG+C++G VL+A ++ + I   
Sbjct: 477 EARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIES 536

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                + TYN LINGLCK   L  A +LF  LQ KG  PD +T  T+I  L +  + + A
Sbjct: 537 GVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDA 596

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
             L  ++      PS   + T++R   +  K S+ + L
Sbjct: 597 TMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINL 634



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 210/463 (45%), Gaps = 51/463 (11%)

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
           +  F  L+    + GR  EA   F ++  F C P    +N +   L      L+AL L+ 
Sbjct: 144 SAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYN 203

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
            MV+   + C P+  TY  ++DGLCK G    A ++  +M +R I P+V  Y  L+   C
Sbjct: 204 RMVS---SGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLC 260

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                ++A  L   M +NG  PD VT+   ++  CK G++D+     EL+   G     +
Sbjct: 261 NEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLI 320

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
            Y+ L+DG    GR       +  M+ K    D+  Y ILI    +  + +DA  L  EM
Sbjct: 321 GYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEM 380

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
             +   P    YNTLL  LF VGN+  A  L+ +M  N+VV DS T    I GLCK G +
Sbjct: 381 KDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLI 440

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ-------------- 496
            +A+QVF  +    C   + TYN LI+GL + G L+ A  LFH+++              
Sbjct: 441 DKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLG 500

Query: 497 ----------------------------------HKGPIPDVVTCSTMIHWLCKEGQMDK 522
                                               G +PDVVT +T+I+ LCK   +D 
Sbjct: 501 ANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDG 560

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           A  L  +++ K   P E+T+ TL+ G  + ++++   +L   +
Sbjct: 561 ALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNI 603



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 138/552 (25%), Positives = 246/552 (44%), Gaps = 54/552 (9%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  FD M++    P +  +T+LL+ L    + +    L   +  NG  PD     + +
Sbjct: 232 DALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFL 291

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G    AF     +    FT   + ++ LI+GL   GR  E    + ++   +  
Sbjct: 292 SGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSIS 351

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++  +  LI        T  A  L +EM ++ G +  PD   YN+++  L   G +D+A
Sbjct: 352 PDITLYTILIRRFAEAGRTKDAFLLLDEMKDK-GFV--PDTFCYNTLLKALFDVGNIDRA 408

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           + L+ +M   N+  +  T+N +ICG C      +A  +F EM ++G  P V+T+NA+I+ 
Sbjct: 409 QSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDG 468

Query: 304 NCKDGKMDKVNRLLELMIQRGVNP--------------DTVTYNSLMDGFCLVGRISRAR 349
             + G +++   L   M + G NP              DT +   L+DG C  G++ +A 
Sbjct: 469 LYRAGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAY 527

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   ++  G   DV +YN LIN  CK + ++ A+ L++E+  + I P  ITY TL+ GL
Sbjct: 528 KLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGL 587

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK----------------------- 446
           ++     DA  L   +  +   P    + T +  LC+                       
Sbjct: 588 WRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSP 647

Query: 447 -------------NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
                        +GF+ E V+    I      L    Y   + GLC++ ++  A ++FH
Sbjct: 648 EDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFH 707

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            L+  G +     C+ +I++LC +  ++ A D+++   +K  + S+     LLR      
Sbjct: 708 ILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLCIRY 767

Query: 554 KKSKVVVLLHKM 565
           ++     L  +M
Sbjct: 768 RRHDAQALSWRM 779



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 210/464 (45%), Gaps = 33/464 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E + ++  M+    SP +T +TIL+   A+  +      L   +   G  PD F  N L
Sbjct: 336 DEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTL 395

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  L  +G    A  ++  +L++    ++ T N +I GLC +G I +A ++F ++    C
Sbjct: 396 LKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGC 455

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFE--EMVNE--------FGAICKPDVVTYNSIID 232
            P V+T+N LI+GL R      A  LF   EM N          GA    D  +   ++D
Sbjct: 456 HPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVD 515

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G+C+ G V KA +LL  + +  + P+V+TYN+LI G C   +   A  LF E+   G+ P
Sbjct: 516 GMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISP 575

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D +T+  +I+   +  + +    L + +++ G  P    YN++M   C + ++S+A  L+
Sbjct: 576 DEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLW 635

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAV-CLYREMLSERIRPSVI----------- 400
           +  + K        YN+    + +D+ + +A  C     L E ++  +            
Sbjct: 636 LDYLPK-------KYNL----SPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPN 684

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y   + GL QV  + DAL++   ++   +V      A  I+ LC +  +  AV +    
Sbjct: 685 PYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYT 744

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            + +  +     N L+  LC   R   A  L  R+   G   DV
Sbjct: 745 LSKRFIVSQPVGNRLLRSLCIRYRRHDAQALSWRMHLVGYDMDV 788



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 127/284 (44%)

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G+      F A++  +   G+  +       M      P    YN++       G I  A
Sbjct: 139 GLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLA 198

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
             L+  MVS GC  +  +Y +L++  CK     DA+ ++ EML   I P V  Y  LLS 
Sbjct: 199 LALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSS 258

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L   G + DA +L+  M+ N   PD  T+  ++ GLCK G V EA   F+ +++    L 
Sbjct: 259 LCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLG 318

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           +  Y+CLI+GL + GR       +  +  K   PD+   + +I    + G+   A  LL 
Sbjct: 319 LIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLD 378

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
           +M+ K  VP    + TLL+         +   L+ +M    +V+
Sbjct: 379 EMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVL 422


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 235/477 (49%), Gaps = 7/477 (1%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           ++F  +   G+ PD     L++   C MG    A   L  ++   F  +  T   +I+  
Sbjct: 210 NMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAF 269

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C +G +      F K+      PNV+ F  LINGLC+  +   A +L EEMV       K
Sbjct: 270 CQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGW---K 326

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           P+V T+ ++IDGLCK G+ +KA  L L++ +     PNV TY ++I G+C  D    A+ 
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEM 386

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L   M + G+ P+  T+  +I+ +CK G   +   L++LM + G +P+  TYN+++DG C
Sbjct: 387 LLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLC 446

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G +  A  L   +   G + D  +Y IL++ +C+      ++  + +ML     P + 
Sbjct: 447 KKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIH 506

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +Y TL+S   +   + ++ +L ++     ++P   T+ + I G C+ G    AV++FQ +
Sbjct: 507 SYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM 566

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            N  C     TY  LI+GLCK  +L  A  L+  +  KG  P  VT  T+ +  CK+   
Sbjct: 567 SNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDS 626

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
             A ++L  +E +  +    T  TL+R      K     +  HK+  ++  V+ ++L
Sbjct: 627 STAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTL 680



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 227/449 (50%), Gaps = 11/449 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP   SF +++       +          +   G   D     L+I+  C+ G  +    
Sbjct: 221 SPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVG 280

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
              +++     PN + F  LINGLC +G I +A  L +++      PNV T  TLI+GLC
Sbjct: 281 YFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC 340

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +   T  A +LF ++V   G   KP+V TY ++I+G CK+  +++A+ LL +M+++ + P
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGY--KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVP 398

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N  TY +LI G C V ++  A  L   M   G  P++ T+NA+I+  CK G +D+  RLL
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             +   G+  D VTY  LM   C     +R+   F  M+  G   D++SY  LI+  C+ 
Sbjct: 459 NKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQ 518

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           ++++++  L+ E +S  + P+  TY +++ G  + GN   A+KL  +M  +   PDS T+
Sbjct: 519 KQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITY 578

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRN---CKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
              I GLCK   + +A  ++ A+ +     CE+   T   L    CK     TA  +  R
Sbjct: 579 GALISGLCKESKLDDARNLYDAMMDKGLSPCEV---TRLTLAYEYCKKDDSSTAINVLDR 635

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           L+ +  I    T +T++  LC EG++D A
Sbjct: 636 LEKRQWIR---TVNTLVRKLCSEGKLDMA 661



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 211/461 (45%), Gaps = 39/461 (8%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+T T N +++     G +  A  +F ++      P+ V+F  ++   C     L A 
Sbjct: 185 LVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAE 244

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +    MV E G I   D  T   IID  C+ G+V++      +M +  + PNVI + +LI
Sbjct: 245 RWLNAMV-ERGFIV--DNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALI 301

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL-LELMIQRGV 325
            G C     K+A  L  EM+  G +P+V T   +I+  CK G  +K  RL L+L+   G 
Sbjct: 302 NGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGY 361

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P+  TY ++++G+C   +++RA  L   M  +G   +  +Y  LI+ +CK      A  
Sbjct: 362 KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYE 421

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV--------------- 430
           L   M  E   P++ TYN ++ GL + G+L +A +L++K+ ++ +               
Sbjct: 422 LMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHC 481

Query: 431 --------------------VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
                                PD  ++ T I   C+   + E+ ++F+   +       +
Sbjct: 482 RQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKK 541

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  +I G C+ G    A KLF R+ + G  PD +T   +I  LCKE ++D A +L   M
Sbjct: 542 TYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAM 601

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             K   P EVT  TL   + + +  S  + +L ++   + +
Sbjct: 602 MDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWI 642



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 208/430 (48%), Gaps = 12/430 (2%)

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK--- 221
           G++ EA  +  ++      P+  T N +++         V + L E   N F  +C+   
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLD-------VAVGMGLVEIAENMFVEMCQRGV 220

Query: 222 -PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PD V++  ++   C  G V +A+  L  M +R    +  T   +I  FC          
Sbjct: 221 SPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVG 280

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            F +M++ G+ P+V+ F A+IN  CK G + +   LLE M++RG  P+  T+ +L+DG C
Sbjct: 281 YFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC 340

Query: 341 LVGRISRARELFVSMV-SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
             G   +A  LF+ +V S G + +V++Y  +IN  CK+ K+  A  L   M  + + P+ 
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            TY TL+ G  +VGN   A +L+D M      P+ +T+   IDGLCK G + EA ++   
Sbjct: 401 NTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNK 460

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +     +    TY  L++  C+      +   F+++   G  PD+ + +T+I   C++ Q
Sbjct: 461 VSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQ 520

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           M ++  L  +  +   +P++ T+ +++ G+ +    S  V L  +M+        ++  +
Sbjct: 521 MKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGA 580

Query: 580 KVVDLLSKDK 589
            +  L  + K
Sbjct: 581 LISGLCKESK 590



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 11/289 (3%)

Query: 51  LNDRH-KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           L D H K GN     A    D M K   SP + ++  ++  L K    D    L  +++ 
Sbjct: 406 LIDGHCKVGNFV--RAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSV 463

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           +GL  D     +L++  C+   T+ + V   ++L+  FTP+  ++  LI+  C + ++ E
Sbjct: 464 HGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKE 523

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           + RLF++       P   T+ ++I G CR  NT +A+KLF+ M N     C PD +TY +
Sbjct: 524 SERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG---CAPDSITYGA 580

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I GLCK+  +D A+ L   M D+ ++P  +T  +L   +C  DD   A    I ++D  
Sbjct: 581 LISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTA----INVLDRL 636

Query: 290 VQPDVV-TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
            +   + T N ++   C +GK+D        ++ +  N + VT    M+
Sbjct: 637 EKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMN 685



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 149/322 (46%), Gaps = 41/322 (12%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           KEA  + +EM + G+ P   T N +++     G ++    +   M QRGV+PD V++  +
Sbjct: 171 KEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLM 230

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +   C +GR+  A     +MV +G   D  +  ++I+A C+   V   V  + +M+   +
Sbjct: 231 VVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGL 290

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P+VI +  L                                   I+GLCK G + +A +
Sbjct: 291 APNVINFTAL-----------------------------------INGLCKQGSIKQAFE 315

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL-QHKGPIPDVVTCSTMIHWL 514
           + + +     +  + T+  LI+GLCK G  + A +LF +L +  G  P+V T + MI+  
Sbjct: 316 LLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGY 375

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           CKE ++++A  LL  M+ +  VP+  T+ TL+ G  +     +   L+  M  E     +
Sbjct: 376 CKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGF-SPN 434

Query: 575 LSLSSKVVDLLSK----DKKYR 592
           +   + ++D L K    D+ YR
Sbjct: 435 IYTYNAIIDGLCKKGSLDEAYR 456


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 263/543 (48%), Gaps = 39/543 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+Y +D M      P + ++T ++  L K+ + +   S+F+ +   G+ P+ F    LI
Sbjct: 105 DALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLI 164

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L K G  + AFV+ GR++      + V +  L++GL   G    A  +F+ L   +  
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VT++ LI+G C+  +      L +EM  +      P+V+ Y+SI+DG  K G +++A
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH---IFPNVIVYSSIVDGYTKKGLLNEA 281

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +++ +M  RNI PNV  Y +LI G+   D    A  LF EM   G++ +    ++ +N 
Sbjct: 282 MDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNN 341

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             + G+M++ + L + M+ RG+ PD V Y S+MDGF   G+ S A  +   M  K    D
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN+LIN   K  K E     +  M    + P   T+NT+++   + GNLG+ALKL++
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF---------------QAIRNCKCELR 468
           +M+   + P+S T    +  LC  G + + + +                +A+ +   + R
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520

Query: 469 --------------------IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
                               + TYN LI+  C++G ++ A  +F  +  KG + D++T +
Sbjct: 521 RADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYN 580

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +IH  C    + KA  +   M  +   P+  T+  LL G        +   L+++M   
Sbjct: 581 ALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKER 640

Query: 569 KLV 571
            LV
Sbjct: 641 GLV 643



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 247/508 (48%), Gaps = 9/508 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           ++G I+   AV   + M    P+P + ++  L+    K     T   L   ++   L P+
Sbjct: 29  RNGEIS--RAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPN 86

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI+  CK      A  +   +      P+ VT+  ++NGLC  G++ EA  +F+
Sbjct: 87  VITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR 146

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PN  ++ TLI+ L +  N   A  L   MV         DVV Y +++DGL 
Sbjct: 147 EMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF---DVVVYTALMDGLF 203

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G  + A+++   + + ++ PN +TY++LI G C + D  + + L  EM +  + P+V+
Sbjct: 204 KAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVI 263

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            ++++++   K G +++   ++  M+QR + P+   Y +L+DG+    +   A +LF  M
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            S+G   + +  +  +N   +  ++E+A  L+++M+S  + P  + Y +++ G F+ G  
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            DA  +  +M       D   +   I+GL K G   E+      +R         T+N +
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG-KYESESFHTGMRQLGLAPDSATFNTM 442

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           IN  CK G L  A KL + ++  G  P+ +TC+ ++  LC  G+++K  DLL DM     
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGF 502

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            P+  T   +L     ++K  +  V+LH
Sbjct: 503 HPTPTTHKAVLDA---SSKSRRADVILH 527



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 250/483 (51%), Gaps = 6/483 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+    +N +    V L + + + G  PD+   N L+N  CK+G    A  ++G I 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                PN +T+  LI+  C    + +A  ++ ++ V +  P+VVT+  ++NGLC++    
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  +F EM  E G +  P+  +Y ++ID L K+G V +A  L  +M  R I  +V+ Y 
Sbjct: 140 EAKSVFREM-EEVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +L+ G         A+ +F  +++  + P+ VT++A+I+ +CK G ++K   LL+ M ++
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            + P+ + Y+S++DG+   G ++ A ++   MV +    +V+ Y  LI+   K  +   A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + L++EM S  +  +    ++ ++ L + G + +A +L   M    ++PD   + + +DG
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR-LQHKGPIP 502
             K G   +A  + Q +        +  YN LINGL K+G+ ++    FH  ++  G  P
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES--FHTGMRQLGLAP 434

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D  T +TMI+  CKEG +  A  LL +M++    P+ +T   L++      +  K + LL
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 563 HKM 565
           + M
Sbjct: 495 NDM 497



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 252/521 (48%), Gaps = 16/521 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+     M++    P +  +  L+    K  Q    + LFK + S GL  + FV++  
Sbjct: 279 NEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSF 338

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N L + G    A  +   ++     P+ V +  +++G    G+  +A  + +++   + 
Sbjct: 339 VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS 398

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +VV +N LINGL +        + F   + + G    PD  T+N++I+  CK+G +  
Sbjct: 399 GFDVVAYNVLINGLFKLGK--YESESFHTGMRQLG--LAPDSATFNTMINAYCKEGNLGN 454

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +MK   + PN IT N L+   C   + ++   L  +M+  G  P   T  A+++
Sbjct: 455 ALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
            + K  + D +    + ++  GV  D  TYN+L+  FC +G I RA  +F  M+ KG   
Sbjct: 515 ASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +YN LI+  C    ++ A  ++ +ML+E + P+V TYN LL GL     + +A  L+
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+   +VP++ T+   + G  K G + E V+++  +       +  TYN LI+   K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMI-HW--LCKEGQMDK---------ANDLLLDM 530
            ++  A +L   +Q +G  P+  T   +I  W  L K+ +++K         A  L  +M
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEM 754

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             K  +P E T   +     +  KK+    +L+K+  +K V
Sbjct: 755 NEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKTV 795



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 215/408 (52%), Gaps = 4/408 (0%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V  FN LI+G CR      A++L E M  E  A   PD+VTYN++++G CK G +  AK
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPA---PDIVTYNTLMNGFCKIGDLFTAK 72

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L+ ++   N+ PNVITY +LI  +C     ++A  ++ EM    + PDVVT+  ++N  
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK GK+++   +   M + GV P+  +Y +L+D     G ++ A  L   MV +G   DV
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y  L++   K     +A  +++ +L E + P+ +TY+ L+ G  ++G++     L+ +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+   + P+   +++ +DG  K G + EA+ V + +        +  Y  LI+G  K  +
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
              A  LF  ++ +G   +     + ++ L + G+M++A++L  DM ++  +P  V + +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           ++ GF +  K+S    +  +M  EK    D+   + +++ L K  KY 
Sbjct: 373 MMDGFFKAGKESDAFNIAQEM-TEKSSGFDVVAYNVLINGLFKLGKYE 419



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 174/314 (55%), Gaps = 5/314 (1%)

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++  V  FN +I+  C++G++ +   LLE M   G  PD VTYN+LM+GFC +G +  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   +       +V +Y  LI+A CK Q +EDA+ +Y EM  + + P V+TY  +++GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA--VQVFQAIRNCKCEL 467
            + G + +A  +  +M+   VVP+ F++AT ID L K G V EA  +Q    +R    ++
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            +  Y  L++GL K G    A  +F  L  +  +P+ VT S +I   CK G ++K   LL
Sbjct: 193 VV--YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            +ME K+  P+ + + +++ G+ +    ++ + ++ KM  ++ ++ ++ +   ++D   K
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM-VQRNILPNVFVYGTLIDGYFK 309

Query: 588 DKKYRECLNQFRHL 601
             +    L+ F+ +
Sbjct: 310 ADQRGIALDLFKEM 323



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 174/348 (50%), Gaps = 1/348 (0%)

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           I  +V  +N LI G+C   +   A  L   M   G  PD+VT+N ++N  CK G +    
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           +L+  +    + P+ +TY +L+D +C    +  A  ++  M  K    DV +Y  ++N  
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK  KVE+A  ++REM    + P+  +Y TL+  LF+ GN+ +A  L  +M +  +  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             +   +DGL K G    A  +FQ +          TY+ LI+G CK+G +     L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           ++ K   P+V+  S+++    K+G +++A D++  M  +N +P+   + TL+ G+ + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +   + L  +M +  L  ++  + S  V+ L +  +  E    F+ ++
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDS-FVNNLKRSGRMEEADELFKDMM 359


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 262/543 (48%), Gaps = 39/543 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+Y +D M      P + ++T ++  L K+ + +   S+F+ +   G+ P+ F    LI
Sbjct: 105 DALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLI 164

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L K G  + AFV+ GR++      + V +  L++GL   G    A  +F+ L   +  
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VT++ LI+G C+  +      L +EM  +      P+V+ Y+SI+DG  K G +++A
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH---IFPNVIVYSSIVDGYTKKGLLNEA 281

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +++ +M  RNI PNV  Y +LI G+   D    A  LF EM   G++ +    ++ +N 
Sbjct: 282 MDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNN 341

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             + G+M++ + L + M+ RG+ PD V Y S+MDGF   G+ S A  +   M  K    D
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V +YN+LIN   K  K E     +  M    + P   T+NT+++   + GNLG+ALKL++
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNG-------------------------FVLEA----- 453
           +M+   + P+S T    +  LC  G                          VL+A     
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520

Query: 454 -----VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
                + +   +     +L + TYN LI+  C++G ++ A  +F  +  KG + D++T +
Sbjct: 521 RADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYN 580

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +IH  C    + KA  +   M  +   P+  T+  LL G        +   L+++M   
Sbjct: 581 ALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKER 640

Query: 569 KLV 571
            LV
Sbjct: 641 GLV 643



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 252/521 (48%), Gaps = 7/521 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           ++G I+   AV   + M    P+P + ++  L+    K     T   L   ++   L P+
Sbjct: 29  RNGEIS--RAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPN 86

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI+  CK      A  +   +      P+ VT+  ++NGLC  G++ EA  +F+
Sbjct: 87  VITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR 146

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PN  ++ TLI+ L +  N   A  L   MV         DVV Y +++DGL 
Sbjct: 147 EMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF---DVVVYTALMDGLF 203

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G  + A+++   + + ++ PN +TY++LI G C + D  + + L  EM +  + P+V+
Sbjct: 204 KAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVI 263

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            ++++++   K G +++   ++  M+QR + P+   Y +L+DG+    +   A +LF  M
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
            S+G   + +  +  +N   +  ++E+A  L+++M+S  + P  + Y +++ G F+ G  
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            DA  +  +M       D   +   I+GL K G   E+      +R         T+N +
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG-KYESESFHTGMRQLGLAPDSATFNTM 442

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           IN  CK G L  A KL + ++  G  P+ +TC+ ++  LC  G+++K  DLL DM     
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGF 502

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            P+  T   +L      ++++ V++ +H       V  DLS
Sbjct: 503 HPTPTTHKAVLDA-SSKSRRADVILHMHDQLVGMGVKLDLS 542



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 250/483 (51%), Gaps = 6/483 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+    +N +    V L + + + G  PD+   N L+N  CK+G    A  ++G I 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                PN +T+  LI+  C    + +A  ++ ++ V +  P+VVT+  ++NGLC++    
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  +F EM  E G +  P+  +Y ++ID L K+G V +A  L  +M  R I  +V+ Y 
Sbjct: 140 EAKSVFREM-EEVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +L+ G         A+ +F  +++  + P+ VT++A+I+ +CK G ++K   LL+ M ++
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            + P+ + Y+S++DG+   G ++ A ++   MV +    +V+ Y  LI+   K  +   A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + L++EM S  +  +    ++ ++ L + G + +A +L   M    ++PD   + + +DG
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR-LQHKGPIP 502
             K G   +A  + Q +        +  YN LINGL K+G+ ++    FH  ++  G  P
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES--FHTGMRQLGLAP 434

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D  T +TMI+  CKEG +  A  LL +M++    P+ +T   L++      +  K + LL
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 563 HKM 565
           + M
Sbjct: 495 NDM 497



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 253/520 (48%), Gaps = 16/520 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+     M++    P +  +  L+    K  Q    + LFK + S GL  + FV++  
Sbjct: 279 NEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSF 338

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N L + G    A  +   ++     P+ V +  +++G    G+  +A  + +++   + 
Sbjct: 339 VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS 398

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +VV +N LINGL +        + F   + + G    PD  T+N++I+  CK+G +  
Sbjct: 399 GFDVVAYNVLINGLFKLGK--YESESFHTGMRQLG--LAPDSATFNTMINAYCKEGNLGN 454

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL +MK   + PN IT N L+   C   + ++   L  +M+  G  P   T  A+++
Sbjct: 455 ALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
            + K  + D +  + + ++  GV  D  TYN+L+  FC +G I RA  +F  M+ KG   
Sbjct: 515 ASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ +YN LI+  C    ++ A  ++ +ML+E + P+V TYN LL GL     + +A  L+
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+   +VP++ T+   + G  K G + E V+++  +       +  TYN LI+   K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMI-HW--LCKEGQMDK---------ANDLLLDM 530
            ++  A +L   +Q +G  P+  T   +I  W  L K+ +++K         A  L  +M
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEM 754

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             K  +P E T   +     +  KK+    +L+K+  +K+
Sbjct: 755 NEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKV 794



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 215/408 (52%), Gaps = 4/408 (0%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V  FN LI+G CR      A++L E M  E  A   PD+VTYN++++G CK G +  AK
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPA---PDIVTYNTLMNGFCKIGDLFTAK 72

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +L+ ++   N+ PNVITY +LI  +C     ++A  ++ EM    + PDVVT+  ++N  
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK GK+++   +   M + GV P+  +Y +L+D     G ++ A  L   MV +G   DV
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y  L++   K     +A  +++ +L E + P+ +TY+ L+ G  ++G++     L+ +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+   + P+   +++ +DG  K G + EA+ V + +        +  Y  LI+G  K  +
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
              A  LF  ++ +G   +     + ++ L + G+M++A++L  DM ++  +P  V + +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           ++ GF +  K+S    +  +M  EK    D+   + +++ L K  KY 
Sbjct: 373 MMDGFFKAGKESDAFNIAQEM-TEKSSGFDVVAYNVLINGLFKLGKYE 419



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 174/314 (55%), Gaps = 5/314 (1%)

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++  V  FN +I+  C++G++ +   LLE M   G  PD VTYN+LM+GFC +G +  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   +       +V +Y  LI+A CK Q +EDA+ +Y EM  + + P V+TY  +++GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA--VQVFQAIRNCKCEL 467
            + G + +A  +  +M+   VVP+ F++AT ID L K G V EA  +Q    +R    ++
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            +  Y  L++GL K G    A  +F  L  +  +P+ VT S +I   CK G ++K   LL
Sbjct: 193 VV--YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            +ME K+  P+ + + +++ G+ +    ++ + ++ KM  ++ ++ ++ +   ++D   K
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM-VQRNILPNVFVYGTLIDGYFK 309

Query: 588 DKKYRECLNQFRHL 601
             +    L+ F+ +
Sbjct: 310 ADQRGIALDLFKEM 323



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 174/348 (50%), Gaps = 1/348 (0%)

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           I  +V  +N LI G+C   +   A  L   M   G  PD+VT+N ++N  CK G +    
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           +L+  +    + P+ +TY +L+D +C    +  A  ++  M  K    DV +Y  ++N  
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK  KVE+A  ++REM    + P+  +Y TL+  LF+ GN+ +A  L  +M +  +  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             +   +DGL K G    A  +FQ +          TY+ LI+G CK+G +     L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           ++ K   P+V+  S+++    K+G +++A D++  M  +N +P+   + TL+ G+ + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +   + L  +M +  L  ++  + S  V+ L +  +  E    F+ ++
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDS-FVNNLKRSGRMEEADELFKDMM 359


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 222/447 (49%), Gaps = 12/447 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +F++L+  L K  +    V  + ++      P+L  +NLL+  LC+ G    A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV-FACDPNVVTFNTLINGLC 197
              I   C +P+ +T N LING C    + +A  LF ++   FA  P   T+  +I   C
Sbjct: 61  FRGI--QC-SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNIN 256
           +      A +L EE      + C  DV+   S+  G CK   VD+A +LLL M + ++  
Sbjct: 118 KMDRLDQARQLLEE-----SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAK 172

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+++ +N +I GFC     +EA  +   ++  G  P+ VT+  +I+  CK G + +  +L
Sbjct: 173 PDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232

Query: 317 LELMIQRG--VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            +++  R     P+ VT+N+L+ G C   R+  A EL   M ++  R D ++Y  L++  
Sbjct: 233 FKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           CK  +  +   ++ EML E   PSV+TY TL+    + G+L DA ++I  M    + PD 
Sbjct: 293 CKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   ++GL +NG V  A + F+ I   +C      Y+ L+ G CK   +  A K +  
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVE 412

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +  +   PD  TC  ++  LCK G+ D
Sbjct: 413 MLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 215/405 (53%), Gaps = 14/405 (3%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN  TF+ LI GLC  GR+ EA   + ++    C PN+   N L+  LC+      A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLIC 267
           F       G  C P V+T N +I+G C+   +DKA EL  +M K+  + P   TY ++I 
Sbjct: 61  FR------GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIK 114

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR-GVN 326
            +C +D   +A+ L  E   +    DV+   ++    CK  ++D+  +LL  M+++    
Sbjct: 115 CYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAK 172

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD V +N ++ GFC  GR+  A E+  ++VS GC  +  +Y  LI+  CK   + +A+ L
Sbjct: 173 PDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232

Query: 387 YREMLSER---IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           ++ +LS R     P+V+T+N L+SGL +   L  A +L+ +M+  D+  D+FT+ T +DG
Sbjct: 233 FK-VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDG 291

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LCK G   E  +VF+ +    C   + TY  L++  CK G L+ A ++   +  KG  PD
Sbjct: 292 LCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPD 351

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           V T + ++  L + G++  A +    +  + C P  V +  L+RG
Sbjct: 352 VTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRG 396



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 61/141 (43%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++E    F+ M++   +P + ++T L+    K         + + + + G+ PD+    +
Sbjct: 298 TSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTV 357

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+  L + G    A     +ILR    P  V ++ L+ G C    + EA + + ++    
Sbjct: 358 LLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417

Query: 182 CDPNVVTFNTLINGLCRTRNT 202
             P+  T   L+  LC+   T
Sbjct: 418 LAPDPATCKLLVEMLCKRGRT 438


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 229/463 (49%), Gaps = 9/463 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           LL +L + ++ + +V +F+R+ S    P+      L+  LC+ G    A   +  + R  
Sbjct: 6   LLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREK 65

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+  T+N +I+ LC   RI  A   F+ +     +P+VVT+NTL+ GLC+      A 
Sbjct: 66  LVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQAC 121

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            LF  M    GA   P  VTY ++ID  CK    + A  LL  M  R  +P V +Y S+I
Sbjct: 122 SLFGSME---GAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSII 178

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C      +A  LF EM   G +PD VT+N +I+  C   ++ +   LL +M++ G  
Sbjct: 179 NGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQ 238

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD +T+ +L++G C   RI  A  LF  M  +GC  D+ ++ +L++  C  +K+  A+ +
Sbjct: 239 PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSV 298

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            R   +     +VI Y  +   L +      A +L+ KM    V P+  T+  +  GL  
Sbjct: 299 VRNYPA--CPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGD 356

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
               + A + F+ +     E  +  YN L++G CK  RL  A K+   +   G  P++VT
Sbjct: 357 WKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVT 416

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +T++   C++G+++   +LL  M ++   P   T+ TL+ G 
Sbjct: 417 YNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 459



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 216/466 (46%), Gaps = 9/466 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S + V  F  +      P   S+  L+  L +  + D   S    +    L PD+F  N+
Sbjct: 16  SEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNV 75

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+ LCK    S A         +   P+ VT+N L+ GLC  GR+ +A  LF  +    
Sbjct: 76  VIDTLCKARRISRAI----EFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAG 131

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ VT+ TLI+  C+      A  L + M +     C P V +Y SII+GLCK+  VD
Sbjct: 132 ITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASR---KCSPTVYSYCSIINGLCKNRKVD 188

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A +L  +MK     P+ +TYN+LI G C      EAK L   M++NG QPD +TF A+I
Sbjct: 189 QAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALI 248

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              C   ++ +   L + M ++G  PD VT+  L+   C++ ++  A  L V      C 
Sbjct: 249 EGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPA--LSVVRNYPACP 306

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             V  Y  +     + +  + A  L ++M    + P+V+TY     GL        A + 
Sbjct: 307 EAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYRE 366

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
             +M    + PD   +   +DG CK   +  A ++ + +        I TYN L+   C+
Sbjct: 367 FRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCR 426

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            G+++   +L H +  +G  PDV T ST++  L   GQ D A   L
Sbjct: 427 KGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFL 472



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 180/364 (49%), Gaps = 11/364 (3%)

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           VT N L++ L R R +   + +F  +   F   CKP+ ++Y  ++  LC+ G +DKA   
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRI---FSQDCKPNALSYCYLVKALCRTGKIDKACST 57

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           + +M    + P+V TYN +I   C       A    IE  +   +PDVVT+N ++   CK
Sbjct: 58  IAEMAREKLVPDVFTYNVVIDTLCKARRISRA----IEFFETMPEPDVVTYNTLLGGLCK 113

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G++ +   L   M   G+ P  VTY +L+D FC + +   A  L   M S+ C   VYS
Sbjct: 114 NGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYS 173

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y  +IN  CK++KV+ A  L+ EM     +P  +TYNTL+ GL     L +A  L+  M 
Sbjct: 174 YCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMV 233

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            N   PD  TF   I+GLC    + EA  +FQ +    C   + T+  L++ LC + +L+
Sbjct: 234 ENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLR 293

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMI-HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
            A  +   +++    P+ V   T I   L +    D+A  LL  M  +   P+ VT+   
Sbjct: 294 PALSV---VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAF 350

Query: 546 LRGF 549
            +G 
Sbjct: 351 FKGL 354



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 187/397 (47%), Gaps = 46/397 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ FF+ M    P P + ++  LL  L KN +     SLF  +   G+ P       L
Sbjct: 87  SRAIEFFETM----PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 142

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CKM     A+ +L  +     +P   ++  +INGLC   ++ +A +LF+++ +  C
Sbjct: 143 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 202

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            P+ VT+NTLI+GLC  +    A  L   MV N F    +PD +T+ ++I+GLC    + 
Sbjct: 203 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGF----QPDKITFTALIEGLCTTDRIK 258

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA--------KC------------- 280
           +A  L   M  +   P+++T+  L+   C +   + A         C             
Sbjct: 259 EAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRE 318

Query: 281 ------------LFIEMMDNGVQPDVVTFNAMINY--NCKDGKMDKVNRLLELMIQRGVN 326
                       L  +M   GV P+VVT+ A      + K+G   +  R    M+++G+ 
Sbjct: 319 LGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGM--RAYREFRRMLEQGIE 376

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD V YN L+DGFC   R+  A ++   M   G   ++ +YN L+  +C+  KVE    L
Sbjct: 377 PDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGEL 436

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              M+S   +P V T++TL++GLF VG    A   ++
Sbjct: 437 LHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLN 473



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 152/320 (47%), Gaps = 34/320 (10%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M   K SP + S+  ++  L KN++ D    LF+ +   G  PD    N LI+ LC    
Sbjct: 162 MASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQR 221

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L  ++ + F P+ +TF  LI GLC   RI EA  LF+ +    C P++VT   
Sbjct: 222 LHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTV 281

Query: 192 LINGLCRTRNTLVALK-------------LFEEMVNEFGAI-----------------CK 221
           L++ LC  R    AL              L+  +  E G                     
Sbjct: 282 LVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVP 341

Query: 222 PDVVTYNSIIDGL--CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           P+VVTY +   GL   K+G   +A     +M ++ I P+++ YN L+ GFC  D    A+
Sbjct: 342 PNVVTYTAFFKGLGDWKEGM--RAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAE 399

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            +   M  +G+ P++VT+N ++ ++C+ GK++ +  LL  M+ RG  PD  T+++L+ G 
Sbjct: 400 KMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 459

Query: 340 CLVGRISRARELFVSMVSKG 359
            +VG+   A       +S+G
Sbjct: 460 FMVGQADAAYSFLNLAMSQG 479



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 151/306 (49%), Gaps = 5/306 (1%)

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           VT NA+++   +  + +++  +   +  +   P+ ++Y  L+   C  G+I +A      
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M  +    DV++YN++I+  CK +++  A+  +  M      P V+TYNTLL GL + G 
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGR 116

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A  L   M+   + P   T+ T ID  CK      A  + Q + + KC   + +Y  
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +INGLCK  ++  A +LF  ++  G  PD VT +T+IH LC + ++ +A DLL  M    
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
             P ++TF  L+ G    ++  +  VL   MA +     DL   + +V  L   +K R  
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQG-CAPDLVTHTVLVSKLCILRKLRPA 295

Query: 595 LNQFRH 600
           L+  R+
Sbjct: 296 LSVVRN 301


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 235/477 (49%), Gaps = 7/477 (1%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           ++F  +   G+ PD     L++   C MG    A   L  ++   F  +  T   +I+  
Sbjct: 210 NMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAF 269

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C +G +      F K+      PNV+ F  LINGLC+  +   A +L EEMV       K
Sbjct: 270 CQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGW---K 326

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           P+V T+ ++IDGLCK G+ +KA  L L++ +     PNV TY ++I G+C  D    A+ 
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEM 386

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L   M + G+ P+  T+  +I+ +CK G   +   L++LM + G +P+  TYN+++DG C
Sbjct: 387 LLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLC 446

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G +  A  L   +   G + D  +Y IL++ +C+      ++  + +ML     P + 
Sbjct: 447 KKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIH 506

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +Y TL+S   +   + ++ +L ++     ++P   T+ + I G C+ G    AV++FQ +
Sbjct: 507 SYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM 566

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            N  C     TY  LI+GLCK  +L  A  L+  +  KG  P  VT  T+ +  CK+   
Sbjct: 567 SNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDS 626

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
             A ++L  +E +  +    T  TL+R      K     +  HK+  ++  V+ ++L
Sbjct: 627 STAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTL 680



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 227/449 (50%), Gaps = 11/449 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP   SF +++       +          +   G   D     L+I+  C+ G  +    
Sbjct: 221 SPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVG 280

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
              +++     PN + F  LINGLC +G I +A  L +++      PNV T  TLI+GLC
Sbjct: 281 YFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC 340

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +   T  A +LF ++V   G   KP+V TY ++I+G CK+  +++A+ LL +M+++ + P
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGY--KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVP 398

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N  TY +LI G C V ++  A  L   M   G  P++ T+NA+I+  CK G +D+  RLL
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             +   G+  D VTY  LM   C     +R+   F  M+  G   D++SY  LI+  C+ 
Sbjct: 459 NKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQ 518

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           ++++++  L+ E +S  + P+  TY +++ G  + GN   A+KL  +M  +   PDS T+
Sbjct: 519 KQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITY 578

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRN---CKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
              I GLCK   + +A  ++ A+ +     CE+   T   L    CK     TA  +  R
Sbjct: 579 GALISGLCKESKLDDARNLYDAMMDKGLSPCEV---TRLTLAYEYCKKDDSSTAINVLDR 635

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           L+ +  I    T +T++  LC EG++D A
Sbjct: 636 LEKRQWIR---TVNTLVRKLCSEGKLDMA 661



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 210/458 (45%), Gaps = 39/458 (8%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +T T N +++     G +  A  +F ++      P+ V+F  ++   C     L A K  
Sbjct: 188 STQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWL 247

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
             MV E G I   D  T   IID  C+ G+V++      +M +  + PNVI + +LI G 
Sbjct: 248 NAMV-ERGFIV--DNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGL 304

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL-LELMIQRGVNPD 328
           C     K+A  L  EM+  G +P+V T   +I+  CK G  +K  RL L+L+   G  P+
Sbjct: 305 CKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPN 364

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
             TY ++++G+C   +++RA  L   M  +G   +  +Y  LI+ +CK      A  L  
Sbjct: 365 VHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMD 424

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV------------------ 430
            M  E   P++ TYN ++ GL + G+L +A +L++K+ ++ +                  
Sbjct: 425 LMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQA 484

Query: 431 -----------------VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
                             PD  ++ T I   C+   + E+ ++F+   +       +TY 
Sbjct: 485 DTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYT 544

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            +I G C+ G    A KLF R+ + G  PD +T   +I  LCKE ++D A +L   M  K
Sbjct: 545 SMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK 604

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
              P EVT  TL   + + +  S  + +L ++   + +
Sbjct: 605 GLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWI 642



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 194/391 (49%), Gaps = 5/391 (1%)

Query: 204 VALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
           V + L E   N F  +C+    PD V++  ++   C  G V +A++ L  M +R    + 
Sbjct: 200 VGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDN 259

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
            T   +I  FC           F +M++ G+ P+V+ F A+IN  CK G + +   LLE 
Sbjct: 260 ATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEE 319

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGCRHDVYSYNILINANCKDQ 378
           M++RG  P+  T+ +L+DG C  G   +A  LF+ +V S G + +V++Y  +IN  CK+ 
Sbjct: 320 MVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED 379

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K+  A  L   M  + + P+  TY TL+ G  +VGN   A +L+D M      P+ +T+ 
Sbjct: 380 KLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYN 439

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             IDGLCK G + EA ++   +     +    TY  L++  C+      +   F+++   
Sbjct: 440 AIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKV 499

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PD+ + +T+I   C++ QM ++  L  +  +   +P++ T+ +++ G+ +    S  
Sbjct: 500 GFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLA 559

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           V L  +M+        ++  + +  L  + K
Sbjct: 560 VKLFQRMSNHGCAPDSITYGALISGLCKESK 590



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 156/296 (52%), Gaps = 1/296 (0%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           KEA  + +EM + G+     T N +++     G ++    +   M QRGV+PD V++  +
Sbjct: 171 KEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLM 230

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +   C +GR+  A +   +MV +G   D  +  ++I+A C+   V   V  + +M+   +
Sbjct: 231 VVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGL 290

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P+VI +  L++GL + G++  A +L+++M      P+ +T  T IDGLCK G+  +A +
Sbjct: 291 APNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFR 350

Query: 456 VF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           +F + +R+   +  + TY  +ING CK  +L  A  L  R+Q +G +P+  T +T+I   
Sbjct: 351 LFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGH 410

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           CK G   +A +L+  M  +   P+  T+  ++ G  +     +   LL+K++   L
Sbjct: 411 CKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 11/289 (3%)

Query: 51  LNDRH-KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           L D H K GN     A    D M K   SP + ++  ++  L K    D    L  +++ 
Sbjct: 406 LIDGHCKVGNFV--RAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSV 463

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
           +GL  D     +L++  C+   T+ + V   ++L+  FTP+  ++  LI+  C + ++ E
Sbjct: 464 HGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKE 523

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           + RLF++       P   T+ ++I G CR  NT +A+KLF+ M N     C PD +TY +
Sbjct: 524 SERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG---CAPDSITYGA 580

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I GLCK+  +D A+ L   M D+ ++P  +T  +L   +C  DD   A    I ++D  
Sbjct: 581 LISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTA----INVLDRL 636

Query: 290 VQPDVV-TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
            +   + T N ++   C +GK+D        ++ +  N + VT    M+
Sbjct: 637 EKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMN 685



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 1/230 (0%)

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G++  A  + V M ++G      + N +++       VE A  ++ EM    + P  +++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
             ++     +G + +A K ++ M     + D+ T    ID  C+ G+V   V  F  +  
Sbjct: 228 KLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 +  +  LINGLCK G +K A +L   +  +G  P+V T +T+I  LCK+G  +K
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347

Query: 523 ANDLLLDM-EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           A  L L +  +    P+  T+  ++ G+ + +K ++  +LL +M  + LV
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/408 (32%), Positives = 218/408 (53%), Gaps = 6/408 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+T + N L+ GL    R+  A + F+        P++ TFNT+I+GLCR      A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE---LLLQMKDRNINPNVITYNSL 265
            ++ +  +G    P V TYNS+IDG CK G          LL +M +  I+P  +T+  L
Sbjct: 214 AKD-IKAWG--LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G+C   +   A  +F EM   G+   VVT+N++I+  C +GK+++  +L+E M   G+
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
           +P+ +T+  ++ GFC  G ++ A +    M  +    DV  Y ILI+   +  K+EDA+ 
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMA 390

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           +   M  + I P+V TYN L++G  + G+   A  L+D+M+   +  D  T+   I  LC
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
             G V +AV++   +     E    TYN +I G C  G +K+A ++  R++      +VV
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           T +  I + C+ G+MD+ANDLL +M  K  VP+ +T+ T+  G ++  
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 211/448 (47%), Gaps = 46/448 (10%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  +S   LL  L   K+ D     F+      + PD++  N +I+ LC++G    A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 139 LGRILRSCFTPNTVTFNFLINGLC---AEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
              I      P+  T+N LI+G C     G +     L K++      P  VTF  LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            C+  NT  A+++FEEM  +  A     VVTYNS+I GLC +G V++  +L+ +M+D  +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAA---SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
           +PN IT+  ++ GFC      +A      M +  V+PDVV +  +I+   + GKM+    
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMA 390

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           + E M ++G++P+  TYN L+ GF   G    A  L   M  KG   DV +YN+LI A C
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
              +V  AV L  EM    + P+ +TYNT++ G    GN+  A ++  +M+         
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME--------- 501

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
                                      C+    + TYN  I   C++G++  A  L + +
Sbjct: 502 --------------------------KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             K  +P+ +T  T+     KEG M+K 
Sbjct: 536 LDKCLVPNGITYETI-----KEGMMEKG 558



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 191/384 (49%), Gaps = 35/384 (9%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F   ++ + SP + +F  +++ L +  Q      + K + + GL P +   N LI+  CK
Sbjct: 179 FRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCK 238

Query: 129 MGITSGAF---VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
            G     +   ++L  ++ +  +P  VTF  LING C       A R+F+++       +
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEM------VNE--FGAICK---------------- 221
           VVT+N+LI+GLC        +KL EEM       NE  FG + K                
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 222 --------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
                   PDVV Y  +IDG  + G ++ A  +   M  + I+PNV TYN LI GF    
Sbjct: 359 GMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           DW+ A  L  EM + G++ DVVT+N +I   C  G++ K  +LL+ M + G+ P+ +TYN
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +++ GFC  G I  A E+   M     R +V +YN+ I   C+  K+++A  L  EML +
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538

Query: 394 RIRPSVITYNTLLSGLFQVGNLGD 417
            + P+ ITY T+  G+ + G   D
Sbjct: 539 CLVPNGITYETIKEGMMEKGYTPD 562



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 8/250 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            E V   + M  +  SP   +F  +L    K             +    + PD+ +  +L
Sbjct: 316 EEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTIL 375

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   ++G    A  V   + +   +PN  T+N LI G    G    A+ L  ++     
Sbjct: 376 IDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + +VVT+N LI  LC       A+KL +EM +E G   +P+ +TYN+II G C  G +  
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEM-SEVG--LEPNHLTYNTIIQGFCDKGNIKS 492

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+  +M+      NV+TYN  I  FC +    EA  L  EM+D  + P+ +T+  +  
Sbjct: 493 AYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI-- 550

Query: 303 YNCKDGKMDK 312
              K+G M+K
Sbjct: 551 ---KEGMMEK 557



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 23/229 (10%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           + D M +    P +  +TIL+    +  + +  +++ + +   G+ P++   N LI    
Sbjct: 356 WIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFS 415

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           + G    A  +L  +       + VT+N LI  LC +G + +A +L  +++    +PN +
Sbjct: 416 RSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHL 475

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC--KPDVVTYNSIIDGLCKDGFVDKAKE 245
           T+NT+I G C   N   A ++   M       C  + +VVTYN  I   C+ G +D+A +
Sbjct: 476 TYNTIIQGFCDKGNIKSAYEIRTRMEK-----CRKRANVVTYNVFIKYFCQIGKMDEAND 530

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           LL +M D+ + PN ITY ++  G                MM+ G  PD+
Sbjct: 531 LLNEMLDKCLVPNGITYETIKEG----------------MMEKGYTPDI 563



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 3/178 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+   + M K   SP +T++  L+T  +++  + +   L   +   G+  D+   N+L
Sbjct: 386 EDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  LC  G    A  +L  +      PN +T+N +I G C +G I  A  +  ++     
Sbjct: 446 IGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
             NVVT+N  I   C+      A  L  EM+++      P+ +TY +I +G+ + G+ 
Sbjct: 506 RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK---CLVPNGITYETIKEGMMEKGYT 560



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 3/161 (1%)

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P + +    + GL     V  A + F++    +    I T+N +I+GLC++G+L+ A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEG---QMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
              ++  G  P V T +++I   CK+G    M   + LL +M      P+ VTF  L+ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           + +N+  +  V +  +M  + +  S ++ +S +  L S+ K
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 259/518 (50%), Gaps = 76/518 (14%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           ++  L K K+ D   S+ +++  +G+ PDLF  +L+I+ LCK      A  VL +++ + 
Sbjct: 175 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 234

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLN-------VFACD---------------- 183
             PN++T+N LI+G    G   E+ R+FK+++       V  C+                
Sbjct: 235 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 294

Query: 184 ------------PNVVTFNTLINGLCRTRNTLV--------------------------- 204
                       P++++++T+++G     ++ +                           
Sbjct: 295 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 354

Query: 205 ----------ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
                     A+ +FE+M N+ G I  PD VT+ ++I  LC+ G +D A      M D  
Sbjct: 355 AYARCGMMDKAMLIFEDMQNK-GMI--PDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 411

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT-FNAMINYNCKDGKMDKV 313
           + P+   Y  LI G C   +  +AK L  EMM+  + P  V  F+++IN  CK+G++ + 
Sbjct: 412 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 471

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             ++++M+Q G  P+ VT+NSLM+G+CLVG +  A  L  +M S G   + Y Y  L++ 
Sbjct: 472 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 531

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK+ +++DA+ ++R+ML + ++P+ + Y+ +L GLFQ      A K+  +M  +     
Sbjct: 532 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 591

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   + GLC+N    EA  + + +     +  I T+N +I+ + K+GR + A +LF 
Sbjct: 592 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 651

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
            +   G +P++ T S MI  L KE   ++A++L + +E
Sbjct: 652 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 689



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 240/498 (48%), Gaps = 42/498 (8%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P +   N+LI+C  ++        ++GR+L++   P+  +++ LI G   +G + +A  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           F ++      P ++  N++I  LC+ +    A  + ++MV+   A   PD+ TY+ IIDG
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA---PDLFTYSLIIDG 213

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK   +DKA+ +L QM +    PN ITYNSLI G+     W E+  +F +M   GV P 
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 273

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR--ISRAREL 351
           V   N+ I+   K G+ ++   + + M+ +G  PD ++Y++++ G+       ++    +
Sbjct: 274 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 333

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M++KG   + + +NILINA  +   ++ A+ ++ +M ++ + P  +T+ T++S L +
Sbjct: 334 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 393

Query: 412 VGNLGDAL-----------------------------------KLIDKMQLNDVVPDSFT 436
           +G L DAL                                   +LI +M   D+ P    
Sbjct: 394 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 453

Query: 437 -FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
            F++ I+ LCK G V E   +   +        + T+N L+ G C +G ++ A  L   +
Sbjct: 454 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 513

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              G  P+     T++   CK G++D A  +  DM  K   P+ V +  +L G  Q  + 
Sbjct: 514 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 573

Query: 556 SKVVVLLHKMAAEKLVVS 573
           +    + H+M      VS
Sbjct: 574 TAAKKMFHEMIESGTTVS 591



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 242/514 (47%), Gaps = 13/514 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLT--MLAKNKQYDTVVSLFKRL 107
           F++   K G   +NEA   FD M+   P P + S++ +L     A +     V ++F  +
Sbjct: 280 FIHALFKHGR--TNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 337

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
            + G+ P+  V N+LIN   + G+   A ++   +      P+TVTF  +I+ LC  GR+
Sbjct: 338 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 397

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            +A   F  +      P+   +  LI G C     + A +L  EM+N+   I  P V  +
Sbjct: 398 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK--DIPPPGVKYF 455

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           +SII+ LCK+G V + K+++  M      PNV+T+NSL+ G+C V + +EA  L   M  
Sbjct: 456 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 515

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G++P+   +  +++  CK+G++D    +   M+ +GV P +V Y+ ++ G     R + 
Sbjct: 516 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 575

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A+++F  M+  G    +++Y +++   C++   ++A  L  ++ +  ++  +IT+N ++S
Sbjct: 576 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 635

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
            +F+VG   +A +L D +    +VP+  T++  I  L K     EA  +F ++       
Sbjct: 636 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 695

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD------ 521
                N ++  L     +  A      +       +  T S +     +EG +       
Sbjct: 696 DSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLFGTA 755

Query: 522 -KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
                 LL++E    V +       L G +  N+
Sbjct: 756 PAPAPALLELELSQTVSAPPKLGVELGGALTQNE 789



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 237/484 (48%), Gaps = 6/484 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+    K+ + D    LF  +   G+ P + + N +I  LCKM     A  ++ +++ S 
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+  T++ +I+GLC    + +A R+ +++      PN +T+N+LI+G   +     ++
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 259

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           ++F++M +  G I  P V   NS I  L K G  ++AK +   M  +   P++I+Y++++
Sbjct: 260 RVFKQM-SSCGVI--PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 316

Query: 267 CGFCCVDD--WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
            G+    D    +   +F  M+  G+ P+   FN +IN   + G MDK   + E M  +G
Sbjct: 317 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 376

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PDTVT+ +++   C +GR+  A   F  MV  G       Y  LI   C   ++  A 
Sbjct: 377 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 436

Query: 385 CLYREMLSERIRPSVITY-NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
            L  EM+++ I P  + Y +++++ L + G + +   ++D M      P+  TF + ++G
Sbjct: 437 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 496

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C  G + EA  +  A+ +   E     Y  L++G CK GR+  A  +F  + HKG  P 
Sbjct: 497 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 556

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            V  S ++H L +  +   A  +  +M       S  T+  +L G  +NN   +  +LL 
Sbjct: 557 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLE 616

Query: 564 KMAA 567
           K+ A
Sbjct: 617 KLFA 620



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 235/471 (49%), Gaps = 49/471 (10%)

Query: 175 KKLNVFACD----PNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNS 229
           ++++ +AC     P + T+N LI+   R     + L +   ++ N  G    PD  +Y S
Sbjct: 85  QRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG----PDDFSY-S 139

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I G  KDG VDKA  L L+M ++ + P ++  NS+I   C + +  +A+ +  +M+D+G
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV------- 342
           + PD+ T++ +I+  CK   MDK  R+LE M++ G  P+++TYNSL+ G+ +        
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 259

Query: 343 ----------------------------GRISRARELFVSMVSKGCRHDVYSYNILIN-- 372
                                       GR + A+ +F SMV KG + D+ SY+ +++  
Sbjct: 260 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 319

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
           A   D  + D   ++  ML++ I P+   +N L++   + G +  A+ + + MQ   ++P
Sbjct: 320 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 379

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D+ TFAT I  LC+ G + +A+  F  + +         Y CLI G C  G L  A +L 
Sbjct: 380 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 439

Query: 493 HRLQHKG-PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
             + +K  P P V   S++I+ LCKEG++ +  D++  M      P+ VTF +L+ G+  
Sbjct: 440 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 499

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                +   LL  MA+   +  +  +   +VD   K+ +  + L  FR +L
Sbjct: 500 VGNMEEAFALLDAMASIG-IEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 549



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 18/270 (6%)

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQ-----------------RGVNPDTVTYNSLMDGFC 340
           N+ ++Y    G  + V+ LLE  ++                 R   P   TYN L+D + 
Sbjct: 52  NSPLHYAAAQGHHEIVSLLLESEVEINLRNYRGQRMDRWACPRHSPPTIHTYNILIDCYR 111

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
            V R      +   ++  G   D +SY+ LI    KD +V+ A CL+ EM+ + + P ++
Sbjct: 112 RVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKIL 170

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
             N+++  L ++  +  A  ++ KM  + + PD FT++  IDGLCK+  + +A +V + +
Sbjct: 171 ICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQM 230

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                     TYN LI+G    G    + ++F ++   G IP V  C++ IH L K G+ 
Sbjct: 231 VEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRT 290

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           ++A  +   M  K   P  +++ T+L G+ 
Sbjct: 291 NEAKCIFDSMVLKGPKPDIISYSTMLHGYA 320


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 261/550 (47%), Gaps = 9/550 (1%)

Query: 27  GRPPNPK--TDLSSHHFKDGTSIAKF---LNDRHKSGNITSNEAVYFFDCMIKMKPSPGM 81
            RPP P     L   + +   S A F   L     +G +  + A+  FD M  +     M
Sbjct: 151 ARPPAPPLFPHLVEVYKEFSFSAASFDLLLRALANAGQL--DGALQVFDEMRTLGCRLSM 208

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            S   +L  LA+       V++F+++   G  PD F + ++    CK+     A   +  
Sbjct: 209 RSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEE 268

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           + +     N V ++ ++NG C  G+  +A R+   L      PN+VT+  L+ G C  +N
Sbjct: 269 MTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKN 328

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A  + +E+      +   D   + ++I+G C+ G ++ A  LL +M D  +  N+  
Sbjct: 329 MEEAEGVVQEIRKNKQLVV--DEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFV 386

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           YN +I G+C +    EA  +  EM   GV+PD  ++N++++  CK G M+K       M+
Sbjct: 387 YNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTML 446

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           + G    T+TYN+L+ GFC +G I  A  L+  M+ KG   +  S + L++   K  K E
Sbjct: 447 RNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTE 506

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A+ L++E L+  +  +  T+NT+++GL ++  + +A +L+DKM+     PD  T+ T  
Sbjct: 507 KALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLF 566

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            G CK G +  A ++   + N      IE +N LI G     +      +   + ++G  
Sbjct: 567 SGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLS 626

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P+ V    +I   CKEG +  A +L L+M  K  VP+     +L+  F +  K  +  ++
Sbjct: 627 PNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLV 686

Query: 562 LHKMAAEKLV 571
           L  +    ++
Sbjct: 687 LQNLVGTDMI 696



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 248/489 (50%), Gaps = 29/489 (5%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +   G+ PD +  N L++  CK G+ + AF     +LR+ F   T+T+N L+ G C
Sbjct: 406 ILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFC 465

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
           + G I +A RL+  +      PN ++ +TL++G  ++  T  AL L++E +     + K 
Sbjct: 466 SLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLAR--GLAK- 522

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +  T+N++I+GLCK   + +A+EL+ +MK     P++ITY +L  G+C + D   A  + 
Sbjct: 523 NTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRIL 582

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            E+ + G  P +  FN++I  +    +  KVN +L  M  RG++P+TV Y +L+ G+C  
Sbjct: 583 NELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKE 642

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV--- 399
           G +  A  L++ M+ KG   +++  + L++   +  K ++A  + + ++   + P +   
Sbjct: 643 GDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAP 702

Query: 400 -----------------------ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
                                  I +N ++ GL ++G + DA  L+  ++    V D+FT
Sbjct: 703 RLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFT 762

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +++ I G   +GFV  A  +   + +      I TYN LI GLCK G L  A  LF +L 
Sbjct: 763 YSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLW 822

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG  P+ +T +T+I   CK+G + +A  L   M  +   P+  T+  L+ G        
Sbjct: 823 TKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYME 882

Query: 557 KVVVLLHKM 565
           + + LL +M
Sbjct: 883 EAIKLLDQM 891



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 262/516 (50%), Gaps = 9/516 (1%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            SF +LL  LA   Q D  + +F  + + G    +   N ++N L + G       V  +
Sbjct: 174 ASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQ 233

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           + R+   P+  T   +    C    ++ A    +++     + N+V ++ ++NG C    
Sbjct: 234 MQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQ 293

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVI 260
           T  A ++ + +    G    P++VTY  ++ G C +  +++A+ ++ ++ K++ +  +  
Sbjct: 294 TNDARRMLDSLP---GRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEA 350

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            + ++I G+C +   ++A  L  EM+D+ +Q ++  +N MIN  CK G+M + + +L  M
Sbjct: 351 VFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM 410

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
              GV PDT +YNSL+DG+C  G +++A E + +M+  G      +YN L+   C    +
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSI 470

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           +DA+ L+  ML + I P+ I+ +TLL G F+ G    AL L  +     +  ++ TF T 
Sbjct: 471 DDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTV 530

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+GLCK   + EA ++   ++  +C   I TY  L +G CK+G +  A ++ + L++ G 
Sbjct: 531 INGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGF 590

Query: 501 IPDVVTCSTMI--HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
            P +   +++I  H++ K  Q  K ND+L +M  +   P+ V +  L+ G+ +       
Sbjct: 591 APTIEFFNSLITGHFIAK--QHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTA 648

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
             L  +M  EK +V +L + S +V    +  K+ E 
Sbjct: 649 YNLYLEM-IEKGLVPNLFICSSLVSCFYRKGKFDEA 683



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 232/476 (48%), Gaps = 29/476 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   ++ M++   +    ++  LL         D  + L+  +   G+ P+    + L
Sbjct: 436 NKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTL 495

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++   K G T  A  +    L      NT TFN +INGLC   R+ EA  L  K+  + C
Sbjct: 496 LDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRC 555

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+++T+ TL +G C+  +   A ++  E+ N   A   P +  +NS+I G        K
Sbjct: 556 PPDIITYRTLFSGYCKIGDMDRASRILNELENLGFA---PTIEFFNSLITGHFIAKQHGK 612

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
             ++L +M +R ++PN + Y +LI G+C   D   A  L++EM++ G+ P++   +++++
Sbjct: 613 VNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVS 672

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDT--------------------------VTYNSLM 336
              + GK D+ N +L+ ++   + PD                           + +N ++
Sbjct: 673 CFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVI 732

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            G C +GRI  A+ L   +  KG   D ++Y+ LI+       V+ A  L   MLS  + 
Sbjct: 733 FGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLT 792

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P+++TYN+L+ GL + G L  A+ L  K+    + P++ T+ T ID  CK+G++ EA ++
Sbjct: 793 PNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKL 852

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
            Q +        + TY+ LINGLC  G ++ A KL  ++      P+ VT  T+I 
Sbjct: 853 KQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 140/572 (24%), Positives = 255/572 (44%), Gaps = 67/572 (11%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLN 120
           +N+A    D +     SP + ++T+L+      K  +    + + +  N  L  D  V  
Sbjct: 294 TNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFG 353

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
            +IN  C+MG    A  +L  ++ S    N   +N +ING C  GR++EA  +  ++   
Sbjct: 354 AVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGV 413

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGF 239
              P+  ++N+L++G C+      A + +  M+ N F A      +TYN+++ G C  G 
Sbjct: 414 GVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAAT----TLTYNALLKGFCSLGS 469

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D A  L   M  + I PN I+ ++L+ GF      ++A  L+ E +  G+  +  TFN 
Sbjct: 470 IDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNT 529

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR---------- 349
           +IN  CK  +M +   L++ M Q    PD +TY +L  G+C +G + RA           
Sbjct: 530 VINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLG 589

Query: 350 -----ELFVSMVS--------------------KGCRHDVYSYNILINANCKDQKVEDAV 384
                E F S+++                    +G   +  +Y  LI   CK+  +  A 
Sbjct: 590 FAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAY 649

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT-------F 437
            LY EM+ + + P++   ++L+S  ++ G   +A  ++  +   D++PD           
Sbjct: 650 NLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKV 709

Query: 438 ATYID-------------------GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           A +ID                   GLCK G + +A  +   +++        TY+ LI+G
Sbjct: 710 ANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHG 769

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
               G +  A  L   +   G  P++VT +++I+ LCK G++ +A  L   +  K   P+
Sbjct: 770 CSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPN 829

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            +T+ TL+    ++   ++   L  +M  E +
Sbjct: 830 AITYNTLIDKHCKDGYITEAFKLKQRMIEEGI 861



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 203/488 (41%), Gaps = 59/488 (12%)

Query: 78   SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            SP   ++  L+    K     T  +L+  +   GL P+LF+ + L++C  + G    A +
Sbjct: 626  SPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANL 685

Query: 138  VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            VL  ++ +   P+       I      G++          N  +     + +N +I GLC
Sbjct: 686  VLQNLVGTDMIPDISAPRLEI------GKVANFIDTVAGGNHHSAK---IMWNIVIFGLC 736

Query: 198  RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            +      A  L  ++ ++ G +   D  TY+S+I G    GFVD A +L   M    + P
Sbjct: 737  KLGRIEDAKNLLADLKDK-GFVA--DNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTP 793

Query: 258  NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
            N++TYNSLI G C   +   A  LF ++   G+ P+ +T+N +I+ +CKDG + +  +L 
Sbjct: 794  NIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLK 853

Query: 318  ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
            + MI+ G++P   TY+ L++G C  G +                                
Sbjct: 854  QRMIEEGIHPTVFTYSILINGLCTQGYM-------------------------------- 881

Query: 378  QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
               E+A+ L  +M+   + P+ +TY TL+ G  +  ++   +  +D+  +  VV  S   
Sbjct: 882  ---EEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQSTI--VVKASPRR 936

Query: 438  ATYIDGLCKNGFVLEAVQVFQA---IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            A    G       L           + N +  +  + YNCLI   C+ G      K F  
Sbjct: 937  AVRRPGSVSRPARLTPAPKASGRDYVLNMQVSITFQQYNCLIV-FCE-GAWSYHEKCFQP 994

Query: 495  LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
              H   +  VV+ +  + WL K    D     L  +     +PS +   +  R F  +  
Sbjct: 995  PSH---VSQVVSSNYRLDWLSK--CRDLLLVTLPLLSGTRYIPSILQSVSYPRLFFMDQA 1049

Query: 555  KSKVVVLL 562
             SKV  L 
Sbjct: 1050 LSKVYPLF 1057



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D M+ +  +P + ++  L+  L K+ +    VSLFK+L + G+ P+    N LI+  CK 
Sbjct: 784 DTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKD 843

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G  + AF +  R++     P   T++ LINGLC +G + EA +L  ++     DPN VT+
Sbjct: 844 GYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTY 903

Query: 190 NTLINGLCR-----------TRNTLVALKLFEEMVNEFGAICKPDVVT 226
            TLI G  R            ++T+V        V   G++ +P  +T
Sbjct: 904 WTLIQGYVRCESVDVPIMPLDQSTIVVKASPRRAVRRPGSVSRPARLT 951


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 261/527 (49%), Gaps = 28/527 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A      M++    P  ++++ ++T L +  + +    LF+ + S G+ PD++   +L
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTIL 496

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK+G+   A      +     +P+ VT+  L++      ++ +A+ +F ++    C
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGC 556

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVN-------------EFGAICKPDVVTYNS 229
            PN +T++ L++GLC+   +  A +++ +M+              E      P+VVTY +
Sbjct: 557 APNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGA 616

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +IDGLCK   V  A+ELL  M      PN I Y++LI GFC V     A+ +F  M   G
Sbjct: 617 LIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCG 676

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             P V T+ ++I+   KD ++D   ++L  M++    P+ VTY +++DG C +G   +A 
Sbjct: 677 YLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKAL 736

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   M  +GC  +V +Y  LI+   K  KV+ ++ L+ +M+++   P+ +TY  L++  
Sbjct: 737 KLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHC 796

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK--NGF---VLEAVQVFQAIRNCK 464
              G L +A  L+ +M+          +  Y+ G C    GF    + ++ + + + +  
Sbjct: 797 CAAGLLDEAHSLLSEMKQT-------YWPKYVQGYCSVVQGFSKKFIASLGLLEELESHG 849

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV---TCSTMIHWLCKEGQMD 521
                  Y  LI+   K GRL+ A +L   +       ++    T +++I  LC   Q++
Sbjct: 850 MVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLE 909

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           KA +L  ++  K  VP    F  L++G ++ NK ++ + L + M  E
Sbjct: 910 KAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDE 956



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 151/581 (25%), Positives = 252/581 (43%), Gaps = 64/581 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  L+ +LA   Q D    + K ++  G   D F +      LCK G  S A V+
Sbjct: 205 PSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVM 264

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              I R  F  +TV    +I+GL       EA     ++   +C PNVVT+ TL+ G  +
Sbjct: 265 ---IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLK 321

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +      ++   M+NE    C P+   +NS++   C       A +LL +M      P 
Sbjct: 322 KKQLGWCKRIISMMMNEG---CNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPG 378

Query: 259 VITYNSLICGFCCVDDWKE------AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
            + YN  I   C  ++         A+ ++ EM+ +    + V         C  GK DK
Sbjct: 379 YVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDK 438

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             ++++LM+++G  PDT TY+ ++   C   ++ +A  LF  M S G   DVY+Y ILI+
Sbjct: 439 AFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILID 498

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
           + CK   +E A   + EM S    PSV+TY  LL    +   +  A  +  +M      P
Sbjct: 499 SFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAP 558

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRN------------------------------ 462
           ++ T++  +DGLCK G   +A +V+  +                                
Sbjct: 559 NTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALI 618

Query: 463 ---CK------------------CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
              CK                  CE     Y+ LI+G CK+G+L  A ++F R+   G +
Sbjct: 619 DGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYL 678

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P V T +++I  + K+ ++D A  +L  M   +C P+ VT+  ++ G  +  +  K + L
Sbjct: 679 PTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKL 738

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           L  M       + ++ +S ++D L K  K    L  F  ++
Sbjct: 739 LSMMEKRGCNPNVVTYTS-LIDGLGKSGKVDMSLQLFTQMI 778



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 159/335 (47%), Gaps = 8/335 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A    D M      P    +  L+    K  + D    +F R++  G  P +     LI
Sbjct: 629 DAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLI 688

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + + K      A  VL ++L S  TPN VT+  +I+GLC  G   +A +L   +    C+
Sbjct: 689 DAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCN 748

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNVVT+ +LI+GL ++    ++L+LF +M+ +    C P+ VTY  +I+  C  G +D+A
Sbjct: 749 PNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG---CAPNYVTYRVLINHCCAAGLLDEA 805

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL +MK       V  Y S++ GF     +  +  L  E+  +G+      +  +I+ 
Sbjct: 806 HSLLSEMKQTYWPKYVQGYCSVVQGFS--KKFIASLGLLEELESHGMVSIAPVYGLLIDS 863

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTV---TYNSLMDGFCLVGRISRARELFVSMVSKGC 360
             K G+++K   L + M++   + +     TY SL+   CL  ++ +A EL+  +  KG 
Sbjct: 864 FSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGV 923

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
             ++ ++  LI    K  K  +A+ L   M  E +
Sbjct: 924 VPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/463 (22%), Positives = 185/463 (39%), Gaps = 58/463 (12%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VLGR+L           N ++   C  G   +A     +L  F   P+  T+N L+  L 
Sbjct: 170 VLGRLL-----------NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLA 218

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                 +  ++ +EM +E G  C  D  T       LCK+G   +  + L+ ++  +   
Sbjct: 219 TAGQMDMGFRVQKEM-SELG-FCT-DKFTVGCFAQALCKEG---RWSDALVMIEREDFKL 272

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + +    +I G      + EA      M  N   P+VVT+  ++    K  ++    R++
Sbjct: 273 DTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRII 332

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
            +M+  G NP+   +NSL+  +C       A +L   M   GC      YNI I + C  
Sbjct: 333 SMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSG 392

Query: 378 QKVED------AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +++        A  +Y EML+     + +        L  +G    A ++I  M     V
Sbjct: 393 EELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFV 452

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD+                                    TY+ +I  LC+  +++ A  L
Sbjct: 453 PDT-----------------------------------STYSKVITFLCEAMKVEKAFLL 477

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F  ++  G IPDV T + +I   CK G +++A     +ME+  C PS VT+  LL  +++
Sbjct: 478 FQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLK 537

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
             +  +   + H+M       + ++ S+ V  L    +  + C
Sbjct: 538 TKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 41/307 (13%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G + + + V+F   M K    P + ++T L+  + K+++ D  + +  ++  +   P+
Sbjct: 658 KVGKLDNAQEVFFR--MSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPN 715

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     +I+ LC++G    A  +L  + +    PN VT+  LI+GL   G++  + +LF 
Sbjct: 716 VVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFT 775

Query: 176 KLNVFACDPNVVTFNTLINGLCR---------------------------------TRNT 202
           ++    C PN VT+  LIN  C                                  ++  
Sbjct: 776 QMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKF 835

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI-- 260
           + +L L EE+ +       P    Y  +ID   K G ++KA EL  +M + + + N+   
Sbjct: 836 IASLGLLEELESHGMVSIAP---VYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSK 892

Query: 261 -TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
            TY SLI   C     ++A  L+ E+   GV P++  F  +I    K  K ++  +L   
Sbjct: 893 DTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYS 952

Query: 320 MIQRGVN 326
           M   GVN
Sbjct: 953 MCDEGVN 959


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 252/490 (51%), Gaps = 4/490 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M++   SP + ++++L+    K +  DTV+ L   + + G+ P+++   + I
Sbjct: 189 EAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICI 248

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L +      A+ +LG++  S   P+ VT   +I  LC  GR+ +A  +F K+      
Sbjct: 249 RVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQK 308

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++    + ++   ++++  MV +       ++V+Y +++D LC+ G VD+A
Sbjct: 309 PDRVTYITLLDKCGDSGDSQSVVEVWNAMVADG---YNDNIVSYTAVVDALCQVGRVDEA 365

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  +MK++ ++P   +YNSLI GF   D +  A  LF  M   G  P+  T    INY
Sbjct: 366 LAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINY 425

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G+  K  +  E M  +G+ PD    N+++      GR+  A+ +F  + + G   D
Sbjct: 426 YGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPD 485

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y ++I    K  K ++A+  + +M+     P V+  N+L+  L++ G   +A +L  
Sbjct: 486 TITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFH 545

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           K++   + P + T+ T + GL + G V E +Q+ + +        + TYN +++ L K G
Sbjct: 546 KLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNG 605

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A  + + +  KG  PD+ + +T+++ L KE ++++A  +   M+ K   P   T C
Sbjct: 606 EVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMK-KILAPDYATLC 664

Query: 544 TLLRGFVQNN 553
           T+L  FV+N 
Sbjct: 665 TILPSFVKNG 674



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 134/546 (24%), Positives = 259/546 (47%), Gaps = 40/546 (7%)

Query: 75   MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
            M  SP   ++T+++   +K  + D  ++ F  +  +G  PD+  LN LI+ L K G  + 
Sbjct: 480  MGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNE 539

Query: 135  AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
            A+ +  ++      P   T+N L++GL  EG++ E  +L +++      PN++T+NT+++
Sbjct: 540  AWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLD 599

Query: 195  GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             L +      A+ +   M  +    C PD+ +YN+++ GL K+  +++A  +  QMK + 
Sbjct: 600  CLSKNGEVNCAIDMLYSMTEKG---CAPDLSSYNTVMYGLIKEERLEEAFRMFCQMK-KI 655

Query: 255  INPNVITYNSLICGFCCVDDWKEA----------------KCLFIEMMDN-----GVQPD 293
            + P+  T  +++  F      KEA                K  F  +M+      GV+  
Sbjct: 656  LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKS 715

Query: 294  V----------VTFN-----AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
            +          +  N      +I + CK  K  + ++L       GV+  T +YNSL+ G
Sbjct: 716  IEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRG 775

Query: 339  FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
                  I  A +LF  M   GC  D ++YN++++A  K  +VE+ + + +EM  +    +
Sbjct: 776  LVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYEST 835

Query: 399  VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
             +TYNT++SGL +   L  A+ L   +      P   T+   +DGL K+G +++A  +F 
Sbjct: 836  YVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFN 895

Query: 459  AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
             +    CE     YN L+NG    G  +  C+LF ++  +G  PD+ + + +I  LC  G
Sbjct: 896  EMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAG 955

Query: 519  QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +++        +      P  + +  L+ G  ++ +  + V L ++M  + ++ +  + +
Sbjct: 956  RLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYN 1015

Query: 579  SKVVDL 584
            S ++ L
Sbjct: 1016 SLILHL 1021



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 264/560 (47%), Gaps = 8/560 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           +G +   F+N   KSG   S +A+  ++ M      P + +   +L  LA + +      
Sbjct: 415 NGYTHVLFINYYGKSGQ--SLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKR 472

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  L + G+ PD     ++I C  K      A      ++ S   P+ +  N LI+ L 
Sbjct: 473 VFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLY 532

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G+  EA +LF KL     +P   T+NTL++GL R       ++L EEM      I  P
Sbjct: 533 KGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTR---TIYPP 589

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +++TYN+++D L K+G V+ A ++L  M ++   P++ +YN+++ G    +  +EA  +F
Sbjct: 590 NLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMF 649

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKM-DKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
            + M   + PD  T   ++    K+G M + ++ + E +++ G N D  +++SLM+G   
Sbjct: 650 CQ-MKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILK 708

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
              + ++ E   ++ S+G   + +    LI   CK +K  +A  L+ +     +     +
Sbjct: 709 KAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGS 768

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN+L+ GL     +  A  L  +M+     PD FT+   +D + K+  V E ++V + + 
Sbjct: 769 YNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMH 828

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               E    TYN +I+GL K  RL+ A  L++ L  +G  P   T   ++  L K G+M 
Sbjct: 829 RKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMV 888

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A +L  +M    C P+   +  LL G         V  L  KM  E+ +  D+   + +
Sbjct: 889 DAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKM-VEQGINPDIKSYTIL 947

Query: 582 VDLLSKDKKYRECLNQFRHL 601
           +D L    +  + L  FR L
Sbjct: 948 IDTLCTAGRLNDGLCYFRQL 967



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 263/574 (45%), Gaps = 49/574 (8%)

Query: 11   SLASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFD 70
            S ASKA    NF+            + S    D  ++   ++  +K G    NEA   F 
Sbjct: 497  SKASKADEAMNFFSDM---------VESGCVPDVLALNSLIDTLYKGGK--GNEAWQLFH 545

Query: 71   CMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG 130
             + +MK  P   ++  LL+ L +  +   V+ L + +      P+L   N +++CL K G
Sbjct: 546  KLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNG 605

Query: 131  ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
              + A  +L  +      P+  ++N ++ GL  E R+ EA R+F ++      P+  T  
Sbjct: 606  EVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILA-PDYATLC 664

Query: 191  TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
            T++    +      AL   +E + + G  C  D  +++S+++G+ K   V+K+ E    +
Sbjct: 665  TILPSFVKNGLMKEALHTVKEYILKAG--CNVDKSSFHSLMEGILKKAGVEKSIEFAENI 722

Query: 251  KDRNINPN-----------------------------------VITYNSLICGFCCVDDW 275
              R I  N                                     +YNSLI G    +  
Sbjct: 723  ASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLI 782

Query: 276  KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
              A+ LF EM   G  PD  T+N +++   K  +++++ ++ + M ++G     VTYN++
Sbjct: 783  DIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTI 842

Query: 336  MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
            + G     R+ +A +L+ +++S+G      +Y  L++   K  K+ DA  L+ EML    
Sbjct: 843  ISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGC 902

Query: 396  RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
             P+   YN LL+G    GN  +  +L +KM    + PD  ++   ID LC  G + + + 
Sbjct: 903  EPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLC 962

Query: 456  VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
             F+ +     E  +  YN LI+GL K  R++ A  LF+ ++ KG IP++ T +++I  L 
Sbjct: 963  YFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLG 1022

Query: 516  KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            K G+  +A  +  ++  K   PS  T+  L+RG+
Sbjct: 1023 KAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGY 1056



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 214/452 (47%), Gaps = 4/452 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           N  TF  +  G+  EG +  A      +       N  T+N LI  L ++     A++++
Sbjct: 135 NVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVY 194

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           + MV +      P V TY+ ++    K   VD    LL +M+ R + PNV +Y   I   
Sbjct: 195 KAMVEDG---ISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVL 251

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
                + EA  +  +M D+G +PDVVT   +I   C  G++     +   M      PD 
Sbjct: 252 GQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDR 311

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTY +L+D     G      E++ +MV+ G   ++ SY  +++A C+  +V++A+ ++ E
Sbjct: 312 VTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDE 371

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M  + + P   +YN+L+SG  +      AL+L + M      P+ +T   +I+   K+G 
Sbjct: 372 MKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQ 431

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
            L+A+Q ++ +++      +   N ++  L   GRL  A ++F+ L+  G  PD +T + 
Sbjct: 432 SLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTM 491

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           MI    K  + D+A +   DM    CVP  +   +L+    +  K ++   L HK+   K
Sbjct: 492 MIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMK 551

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +  ++ + ++ ++  L ++ K +E +     +
Sbjct: 552 IEPTNGTYNT-LLSGLGREGKVKEVMQLLEEM 582



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 132/545 (24%), Positives = 242/545 (44%), Gaps = 72/545 (13%)

Query: 129 MGITSG---AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           +G+  G   A V L  +  +  + N  T+N LI  L   G   EA  ++K +      P+
Sbjct: 146 VGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPS 205

Query: 186 VVTFNTLINGLCRTRNTLVALKL----------------------------FEEMVNEFG 217
           V T++ L+    + R+    L L                            F+E  +  G
Sbjct: 206 VRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILG 265

Query: 218 AI----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
            +    CKPDVVT+  II  LC  G +  AK +  +MK  +  P+ +TY +L+       
Sbjct: 266 KMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSG 325

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           D +    ++  M+ +G   ++V++ A+++  C+ G++D+   + + M ++G++P+  +YN
Sbjct: 326 DSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYN 385

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           SL+ GF       RA ELF  M + G   + Y++ + IN   K  +   A+  Y  M S+
Sbjct: 386 SLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSK 445

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA--------------- 438
            I P V   N +L  L   G LG A ++  +++   V PD+ T+                
Sbjct: 446 GIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEA 505

Query: 439 --------------------TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
                               + ID L K G   EA Q+F  ++  K E    TYN L++G
Sbjct: 506 MNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSG 565

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L + G++K   +L   +      P+++T +T++  L K G+++ A D+L  M  K C P 
Sbjct: 566 LGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPD 625

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             ++ T++ G ++  +  +   +  +M  +K++  D +    ++    K+   +E L+  
Sbjct: 626 LSSYNTVMYGLIKEERLEEAFRMFCQM--KKILAPDYATLCTILPSFVKNGLMKEALHTV 683

Query: 599 RHLLF 603
           +  + 
Sbjct: 684 KEYIL 688



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 211/454 (46%), Gaps = 10/454 (2%)

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT---RNTLVALK 207
           T + N+++  + A GR+ + A++F  +       NV TF T+  G+      R+  VAL 
Sbjct: 101 TESCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALP 160

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +  E      A    +  TYN +I  L K GF  +A E+   M +  I+P+V TY+ L+ 
Sbjct: 161 VMRE------AGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMV 214

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            F    D      L  EM   GV+P+V ++   I    +  + D+   +L  M   G  P
Sbjct: 215 AFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKP 274

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D VT+  ++   C  GR+S A+ +F  M +   + D  +Y  L++        +  V ++
Sbjct: 275 DVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVW 334

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             M+++    ++++Y  ++  L QVG + +AL + D+M+   + P+ +++ + I G  K 
Sbjct: 335 NAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKA 394

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
                A+++F  +  C       T+   IN   K G+   A + +  ++ KG +PDV   
Sbjct: 395 DMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAA 454

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + +++ L   G++  A  +  +++A    P  +T+  +++   + +K  + +     M  
Sbjct: 455 NAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVE 514

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              V   L+L+S ++D L K  K  E    F  L
Sbjct: 515 SGCVPDVLALNS-LIDTLYKGGKGNEAWQLFHKL 547



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 144/663 (21%), Positives = 277/663 (41%), Gaps = 142/663 (21%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+TI + +L +  ++D    +  ++  +G  PD+    ++I  LC  G  S A  V
Sbjct: 239 PNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAV 298

Query: 139 LGRILRSCFTP-----------------------------------NTVTFNFLINGLCA 163
             ++  S   P                                   N V++  +++ LC 
Sbjct: 299 FWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQ 358

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM----------- 212
            GR+ EA  +F ++      P   ++N+LI+G  +      AL+LF  M           
Sbjct: 359 VGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYT 418

Query: 213 ----VNEFG-------AICK----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
               +N +G       AI +          PDV   N+++  L   G +  AK +  ++K
Sbjct: 419 HVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELK 478

Query: 252 DRNINPNVITYNSLICGFCCVDDWK--EAKCLFIEMMDNGVQPDVVTFNAMIN------- 302
              ++P+ ITY  +I   CC    K  EA   F +M+++G  PDV+  N++I+       
Sbjct: 479 AMGVSPDTITYTMMIK--CCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGK 536

Query: 303 ----------------------YNC------KDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
                                 YN       ++GK+ +V +LLE M +    P+ +TYN+
Sbjct: 537 GNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNT 596

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA---VCLYREML 391
           ++D     G ++ A ++  SM  KGC  D+ SYN ++    K++++E+A    C  +++L
Sbjct: 597 VLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKIL 656

Query: 392 SE------RIRPSVI--------------------------TYNTLLSGLFQVGNLGDAL 419
           +        I PS +                          ++++L+ G+ +   +  ++
Sbjct: 657 APDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSI 716

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +  + +    ++ + F     I  LCK+   LEA Q+F   +     L+  +YN LI GL
Sbjct: 717 EFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGL 776

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
                +  A  LF  ++  G  PD  T + ++  + K  ++++   +  +M  K    + 
Sbjct: 777 VDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTY 836

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
           VT+ T++ G V++ +  + + L + + +E    +  +    ++D L K  K  +  N F 
Sbjct: 837 VTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGP-LLDGLLKSGKMVDAENLFN 895

Query: 600 HLL 602
            +L
Sbjct: 896 EML 898



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 191/398 (47%), Gaps = 3/398 (0%)

Query: 82   TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            +SF  L+  + K    +  +   + + S G+  + F L  LI  LCK      A  +  +
Sbjct: 697  SSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNK 756

Query: 142  ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
                  +  T ++N LI GL  E  I  A  LF ++    C P+  T+N +++ + ++  
Sbjct: 757  FKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMR 816

Query: 202  TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
                LK+ +EM  +     +   VTYN+II GL K   +++A +L   +     +P   T
Sbjct: 817  VEEMLKVQKEMHRKG---YESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCT 873

Query: 262  YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
            Y  L+ G        +A+ LF EM++ G +P+   +N ++N +   G  + V +L E M+
Sbjct: 874  YGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMV 933

Query: 322  QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            ++G+NPD  +Y  L+D  C  GR++     F  +   G   D+  YN+LI+   K +++E
Sbjct: 934  EQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIE 993

Query: 382  DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            +AV L+ EM  + I P++ TYN+L+  L + G   +A ++ +++      P  FT+   I
Sbjct: 994  EAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALI 1053

Query: 442  DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
             G   +G    A   +  +    C+    TY  L N L
Sbjct: 1054 RGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQLPNQL 1091



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 168/350 (48%), Gaps = 3/350 (0%)

Query: 157  LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
            LI  LC   + +EA +LF K           ++N+LI GL       +A  LF EM    
Sbjct: 737  LIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEM-KRL 795

Query: 217  GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
            G  C PD  TYN I+D + K   V++  ++  +M  +      +TYN++I G       +
Sbjct: 796  G--CGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLE 853

Query: 277  EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
            +A  L+  +M  G  P   T+  +++   K GKM     L   M++ G  P+   YN L+
Sbjct: 854  QAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILL 913

Query: 337  DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            +G  + G      +LF  MV +G   D+ SY ILI+  C   ++ D +C +R++    + 
Sbjct: 914  NGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLE 973

Query: 397  PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
            P +I YN L+ GL +   + +A+ L ++M+   ++P+ +T+ + I  L K G   EA Q+
Sbjct: 974  PDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQM 1033

Query: 457  FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            ++ +     +  + TYN LI G    G    A   + ++   G  P+  T
Sbjct: 1034 YEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSST 1083



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 1/223 (0%)

Query: 346 SRARELFVSMVSKGCR-HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           + A ELF +   +  + H   S N ++       +V D   ++  M  + ++ +V T+ T
Sbjct: 82  AEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFAT 141

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           +  G+   G L  A   +  M+   +  +++T+   I  L K+GF  EA++V++A+    
Sbjct: 142 IFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDG 201

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + TY+ L+    K   + T   L + ++ +G  P+V + +  I  L +  + D+A 
Sbjct: 202 ISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAY 261

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
            +L  ME   C P  VT   +++      + S    +  KM A
Sbjct: 262 HILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKA 304



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 66/134 (49%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            N+ + +F  + ++   P +  + +L+  L K+++ +  VSLF  +   G+ P+L+  N L
Sbjct: 958  NDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSL 1017

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I  L K G  + A  +   +LR  + P+  T+N LI G    G    A   + ++ V  C
Sbjct: 1018 ILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGC 1077

Query: 183  DPNVVTFNTLINGL 196
             PN  T+  L N L
Sbjct: 1078 QPNSSTYMQLPNQL 1091


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 259/500 (51%), Gaps = 5/500 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D M      P + S+  ++  + K+    + + +F  +   GL PD+   N++I
Sbjct: 167 EAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMI 226

Query: 124 NCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +   K G       +  R+++ SC  PN VT+N +INGLC  GR  E+  +++++    C
Sbjct: 227 DGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNEC 286

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + ++ T+++LI GLC   N   A+++++EMV     +   DVVTYN++++G C+ G + +
Sbjct: 287 EMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVV---DVVTYNALLNGFCRAGKIKE 343

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           + EL + M   N + NV++YN  I G       +EA  ++  +   G   D  T+  +I+
Sbjct: 344 SFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIH 402

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+G ++K  ++L+     G   D   Y+S++DG    GR+  A  +   M   GC  
Sbjct: 403 GLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCEL 462

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
             +  N LIN   +  K+E+A+C +REM ++   P+V++YNTL++GL +     DA   +
Sbjct: 463 SPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFV 522

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M   D  PD  T++  +DGLC+   +  A+ +++ +     E  +  +N L++GLC  
Sbjct: 523 KEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSA 582

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G+++ A  L+  ++    +P++VT +T++  L K  + + A+ +   M      P  +++
Sbjct: 583 GKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISY 642

Query: 543 CTLLRGFVQNNKKSKVVVLL 562
              L+G     + S  + L 
Sbjct: 643 NITLKGLCSCGRISDGIALF 662



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 250/520 (48%), Gaps = 44/520 (8%)

Query: 86  ILLTML---AKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           ++LT+L   AK+K  +  +  F+++    G  P +   N L+N   +  +   A   L  
Sbjct: 80  VVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAY 139

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
                  PN  T+N LI     + + +EA  L   +      P+V ++ T+ING+ ++ +
Sbjct: 140 FETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGD 199

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVI 260
            + AL++F+EM  E G +  PDV+ YN +IDG  K G   + KE+  ++ K   + PNV+
Sbjct: 200 LVSALEVFDEMF-ERGLV--PDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVV 256

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TYN +I G C +  + E+  ++  M  N  + D+ T++++I   C  G +D    + + M
Sbjct: 257 TYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEM 316

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           ++R V  D VTYN+L++GFC  G+I  + EL+V M  + C H+V SYNI I    +++KV
Sbjct: 317 VKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKV 375

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           E+A+ ++  +          TY  L+ GL + G+L  ALK++ + +      D+F +++ 
Sbjct: 376 EEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSI 435

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELR-------------------------------- 468
           +DGL K G V EA+ +   +    CEL                                 
Sbjct: 436 VDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGC 495

Query: 469 ---IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
              + +YN LINGLCK  R   A      +  K   PD++T S ++  LC+  ++D A +
Sbjct: 496 SPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALN 555

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           L   +  K   P       L+ G     K    ++L   M
Sbjct: 556 LWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNM 595



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 233/455 (51%), Gaps = 6/455 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P   ++N L+N       + +A             PN+ T+N LI    + R  + A  L
Sbjct: 112 PGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGL 171

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            + M   +    KPDV +Y ++I+G+ K G +  A E+  +M +R + P+V+ YN +I G
Sbjct: 172 LDWM---WSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDG 228

Query: 269 FCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           F    D+ + K ++  ++    V P+VVT+N MIN  CK G+ D+   + E M +     
Sbjct: 229 FFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEM 288

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  TY+SL+ G C VG +  A E++  MV +    DV +YN L+N  C+  K++++  L+
Sbjct: 289 DLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW 348

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             M  E    +V++YN  + GLF+   + +A+ + + ++      DS T+   I GLCKN
Sbjct: 349 VMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKN 407

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + +A+++ +  ++   +L    Y+ +++GL K GR+  A  + H++   G       C
Sbjct: 408 GHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC 467

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + +I+   +  ++++A     +ME K C P+ V++ TL+ G  +  + S     + +M  
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEM-L 526

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           EK    D+   S ++D L + KK    LN +R +L
Sbjct: 527 EKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVL 561



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 214/444 (48%), Gaps = 39/444 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++ +++  L K  ++D  + +++R+  N    DLF  + LI  LC +G   GA  V
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEV 312

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +++     + VT+N L+NG C  G+I E+  L+  +    C  NVV++N  I GL  
Sbjct: 313 YKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFE 371

Query: 199 TRNTLVALKLFEEM--------VNEFGAIC------------------------KPDVVT 226
            R    A+ ++E +           +G +                         K D   
Sbjct: 372 NRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFA 431

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRN--INPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           Y+SI+DGL K G VD+A  ++ QM      ++P+V   N LI GF      +EA C F E
Sbjct: 432 YSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC--NPLINGFVRASKLEEAICFFRE 489

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M   G  P VV++N +IN  CK  +       ++ M+++   PD +TY+ LMDG C   +
Sbjct: 490 METKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKK 549

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           I  A  L+  ++ KG   DV  +NIL++  C   K+EDA+ LY  M      P+++T+NT
Sbjct: 550 IDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNT 609

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNC 463
           L+ GL++      A  +   M  N   PD  ++   + GLC  G + + + +F  A++N 
Sbjct: 610 LMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNG 669

Query: 464 KCELRIETYNCLINGLCKMGRLKT 487
                I T+  L+  + K+G L +
Sbjct: 670 ILPTSI-TWYILVRAVLKLGPLDS 692



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 3/228 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+    +  + +  +  F+ + + G  P +   N LIN LCK    S A+  +  +L   
Sbjct: 470 LINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKD 529

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           + P+ +T++ L++GLC   +I  A  L++++ V   +P+V   N L++GLC       AL
Sbjct: 530 WKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDAL 589

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            L+  M     + C P++VT+N+++DGL K    + A  +   M      P++I+YN  +
Sbjct: 590 LLYSNMKQ---SNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITL 646

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
            G C      +   LF + + NG+ P  +T+  ++    K G +D ++
Sbjct: 647 KGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDSLS 694


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 257/518 (49%), Gaps = 76/518 (14%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           ++  L K K+ D   S+ +++  +G+ PDLF  +L+I+ LCK      A  VL +++ + 
Sbjct: 231 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 290

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKL------------NVF-------------- 180
             PN++T+N LI+G    G   E+ R+FK++            N F              
Sbjct: 291 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 350

Query: 181 ---------ACDPNVVTFNTLINGLCRTRNTLV--------------------------- 204
                       P++++++T+++G     ++ +                           
Sbjct: 351 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 410

Query: 205 ----------ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
                     A+ +FE+M N+ G I  PD VT+ ++I  LC+ G +D A      M D  
Sbjct: 411 AYARCGMMDKAMLIFEDMQNK-GMI--PDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 467

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT-FNAMINYNCKDGKMDKV 313
           + P+   Y  LI G C   +  +AK L  EMM+  + P  V  F+++IN  CK+G++ + 
Sbjct: 468 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 527

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             ++++M+Q G  P+ VT+NSLM+G+CLVG +  A  L  +M S G   + Y Y  L++ 
Sbjct: 528 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 587

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK+ +++DA+ ++R+ML + ++P+ + Y+ +L GLFQ      A K+  +M  +     
Sbjct: 588 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 647

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             T+   + GLC+N    EA  + + +     +  I T+N +I+ + K+GR + A +LF 
Sbjct: 648 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 707

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
            +   G +P++ T S MI  L KE   ++A++L + +E
Sbjct: 708 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 745



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 242/516 (46%), Gaps = 46/516 (8%)

Query: 100 VVSLFKRLN----SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
            + LFKR++         P +   N+LI+C  ++        ++GR+L++   P+  +++
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI G   +G + +A  LF ++      P ++  N++I  LC+ +    A  + ++MV+ 
Sbjct: 196 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
             A   PD+ TY+ IIDGLCK   +DKA+ +L QM +    PN ITYNSLI G+     W
Sbjct: 255 GIA---PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMW 311

Query: 276 -----------------------------------KEAKCLFIEMMDNGVQPDVVTFNAM 300
                                               EAKC+F  M+  G +PD+++++ M
Sbjct: 312 NESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 371

Query: 301 IN--YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++      D  +  V+ +  LM+ +G+ P+   +N L++ +   G + +A  +F  M +K
Sbjct: 372 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 431

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   D  ++  +I++ C+  +++DA+  +  M+   + PS   Y  L+ G    G L  A
Sbjct: 432 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 491

Query: 419 LKLIDKMQLNDVVPDSFT-FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
            +LI +M   D+ P     F++ I+ LCK G V E   +   +        + T+N L+ 
Sbjct: 492 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 551

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G C +G ++ A  L   +   G  P+     T++   CK G++D A  +  DM  K   P
Sbjct: 552 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 611

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           + V +  +L G  Q  + +    + H+M      VS
Sbjct: 612 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 647



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 242/514 (47%), Gaps = 13/514 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLT--MLAKNKQYDTVVSLFKRL 107
           F++   K G   +NEA   FD M+   P P + S++ +L     A +     V ++F  +
Sbjct: 336 FIHALFKHGR--TNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 393

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
            + G+ P+  V N+LIN   + G+   A ++   +      P+TVTF  +I+ LC  GR+
Sbjct: 394 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 453

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            +A   F  +      P+   +  LI G C     + A +L  EM+N+   I  P V  +
Sbjct: 454 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK--DIPPPGVKYF 511

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           +SII+ LCK+G V + K+++  M      PNV+T+NSL+ G+C V + +EA  L   M  
Sbjct: 512 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 571

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G++P+   +  +++  CK+G++D    +   M+ +GV P +V Y+ ++ G     R + 
Sbjct: 572 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 631

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A+++F  M+  G    +++Y +++   C++   ++A  L  ++ +  ++  +IT+N ++S
Sbjct: 632 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 691

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
            +F+VG   +A +L D +    +VP+  T++  I  L K     EA  +F ++       
Sbjct: 692 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 751

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM------- 520
                N ++  L     +  A      +       +  T S +     +EG +       
Sbjct: 752 DSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLFGTA 811

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
                 LL++E    V +       L G +  N+
Sbjct: 812 PAPAPALLELELSQTVSAPPKLGVELGGALTQNE 845



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 237/484 (48%), Gaps = 6/484 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+    K+ + D    LF  +   G+ P + + N +I  LCKM     A  ++ +++ S 
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+  T++ +I+GLC    + +A R+ +++      PN +T+N+LI+G   +     ++
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 315

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           ++F++M +  G I  P V   NS I  L K G  ++AK +   M  +   P++I+Y++++
Sbjct: 316 RVFKQM-SSCGVI--PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 372

Query: 267 CGFCCVDD--WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
            G+    D    +   +F  M+  G+ P+   FN +IN   + G MDK   + E M  +G
Sbjct: 373 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 432

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PDTVT+ +++   C +GR+  A   F  MV  G       Y  LI   C   ++  A 
Sbjct: 433 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 492

Query: 385 CLYREMLSERIRPSVITY-NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
            L  EM+++ I P  + Y +++++ L + G + +   ++D M      P+  TF + ++G
Sbjct: 493 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 552

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C  G + EA  +  A+ +   E     Y  L++G CK GR+  A  +F  + HKG  P 
Sbjct: 553 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 612

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            V  S ++H L +  +   A  +  +M       S  T+  +L G  +NN   +  +LL 
Sbjct: 613 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLE 672

Query: 564 KMAA 567
           K+ A
Sbjct: 673 KLFA 676



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 453 AVQVFQAIRNCKCELR----IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
           A+++F+ +    C       I TYN LI+   ++ R      +  RL   G  PD  + S
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            +I+   K+G++DKA+ L L+M  +  +P  +   ++++   +  +  K   ++ KM  +
Sbjct: 196 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKM-VD 253

Query: 569 KLVVSDLSLSSKVVDLLSKDK 589
             +  DL   S ++D L K K
Sbjct: 254 SGIAPDLFTYSLIIDGLCKSK 274


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 213/400 (53%), Gaps = 3/400 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M+  KP P +  F+ L + + +   Y+TVV L K +   G+  D+  L++L
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C +        VL +IL+    P+ VTF  L+NGLC EG++ +   L+  + V   
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV T+N +IN L ++     AL   ++M  + G  C P+VV Y+++IDG C  G +D+
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQM-EKVG--CVPNVVNYSTLIDGYCLRGQMDE 220

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ +   M  +   PNV TY SL+ G+C ++  +EA  L  E +  G+ PD+VTF  +I+
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+ G+     +L   +   G  P+ +TY  L+DG C  G +  A  LF  M     + 
Sbjct: 281 GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKP 340

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           ++  Y ILI++ CK  K++D   L+  ++ E ++P+V TY  L+  L + G + +A KL 
Sbjct: 341 NLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLF 400

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            KM+ +   PD   +   I G  ++     A Q+ + + N
Sbjct: 401 RKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVN 440



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 215/382 (56%), Gaps = 3/382 (0%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P +V F+ L + + R  +    + L +E+  EF  I + D+ + + +I+  C    VD  
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEI--EFLGI-EQDIHSLSILINCFCHLHRVDFG 116

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +L ++    + P+++T+ +L+ G C      +   L+ +M+  G+QP+V T+N +IN 
Sbjct: 117 LSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINS 176

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K GK ++    L+ M + G  P+ V Y++L+DG+CL G++  AR +F  MVSKGC  +
Sbjct: 177 LSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPN 236

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           VY+Y  L+N  CK +++E+AV L  E L + + P ++T+ T++SGL + G    A +L  
Sbjct: 237 VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFR 296

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            +  +   P+  T+   +DGLCK+G + EA  +FQ ++    +  +  Y  LI+ LCK G
Sbjct: 297 YICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCG 356

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           ++K   +LF RL  +G  P+V T + ++  LCKEG + +A+ L   ME   C P +  + 
Sbjct: 357 KIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYN 416

Query: 544 TLLRGFVQNNKKSKVVVLLHKM 565
            +++GF+Q+   S    L+ +M
Sbjct: 417 VIIQGFLQHKDPSMARQLVEEM 438



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 144/287 (50%), Gaps = 5/287 (1%)

Query: 51  LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +N   KSG   +NEA+ F   M K+   P + +++ L+       Q D   S+F  + S 
Sbjct: 174 INSLSKSGK--ANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSK 231

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G  P+++    L+N  CK+     A  +L   LR    P+ VTF  +I+GLC  GR + A
Sbjct: 232 GCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAA 291

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
            +LF+ +      PN++T+  L++GLC+  N   A  LF+EM     +  KP++V Y  +
Sbjct: 292 QQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQR---STVKPNLVIYTIL 348

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ID LCK G +   KEL  ++ D  + PNV TY +L+   C      EA  LF +M ++G 
Sbjct: 349 IDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGC 408

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
            PD   +N +I    +        +L+E M+ RG + D  T   L D
Sbjct: 409 TPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 161/329 (48%), Gaps = 1/329 (0%)

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           D  +A   F  M+     P +V F+ + +   + G  + V  L + +   G+  D  + +
Sbjct: 42  DKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLS 101

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
            L++ FC + R+     +   ++  G    + ++  L+N  C + K++  + LY +ML  
Sbjct: 102 ILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVR 161

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            ++P+V TYN +++ L + G   +AL  + +M+    VP+   ++T IDG C  G + EA
Sbjct: 162 GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEA 221

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             VF  + +  C   + TY  L+NG CK+ R++ A +L      KG +PD+VT +T+I  
Sbjct: 222 RSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISG 281

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           LC+ G+   A  L   + A    P+ +T+  LL G  ++    +   L  +M     V  
Sbjct: 282 LCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEM-QRSTVKP 340

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +L + + ++D L K  K ++    F  L+
Sbjct: 341 NLVIYTILIDSLCKCGKIKDGKELFSRLI 369


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 240/456 (52%), Gaps = 3/456 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF  M+K    P   S+ IL+  L         + L   + ++GL PD+   N+L     
Sbjct: 303 FFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFR 362

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
            +G+ +GA+ ++ ++L     PN VT+  LI G C  G + EA +L+K++       +++
Sbjct: 363 LLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSII 422

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           +   L+  LC++R   VA KLF EM  E   + +PD++TY+++I GLCK G V +A  L 
Sbjct: 423 SSTVLLGSLCKSRQVDVAFKLFCEM--EANGL-RPDLITYSTLIHGLCKQGEVQQAILLY 479

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M    I PN + + +++ G C      +A+  F  ++ + +  D++ +N MI+   K 
Sbjct: 480 EKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKR 539

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G   +  +L + + ++G++P  VT+NSLM GFC+  ++S+AR L  ++   G   +  +Y
Sbjct: 540 GNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTY 599

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             L+N  C++  ++  + L  EM ++ I P+ ITY  ++ GL +   L ++ +L++ M  
Sbjct: 600 TTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDA 659

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + PD  ++ T I   CK   + +A Q++  +     E    TYN LING C  G LK 
Sbjct: 660 VGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKD 719

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           A  L   LQ++    +    +T+I   C +G +DKA
Sbjct: 720 ADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKA 755



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 249/513 (48%), Gaps = 38/513 (7%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           ++KMK    + S     ++L   +  + +  ++  +  +G     +  +++++ LC+   
Sbjct: 202 LVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSR 261

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A +         F P+ V+FN +++  C  G +  A   F  +      P+  ++N 
Sbjct: 262 FQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNI 321

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+GLC   +   AL L  +M N      +PD+VTYN +  G    G ++ A  ++ +M 
Sbjct: 322 LIHGLCIAGSMGEALDLKNDMENHG---LEPDMVTYNILAKGFRLLGLINGAWNIIQKML 378

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD------------------------ 287
            +  NPN++TY  LICG C + + +EA  L+ EM+                         
Sbjct: 379 IKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVD 438

Query: 288 -----------NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
                      NG++PD++T++ +I+  CK G++ +   L E M    + P+++ + +++
Sbjct: 439 VAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAIL 498

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            G C  G+IS+AR  F  +++     D+  YNI+I+   K     +AV LY+++  + I 
Sbjct: 499 MGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGIS 558

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P+++T+N+L+ G      L  A +L+D ++L+ + P++ T+ T ++  C+ G +   +++
Sbjct: 559 PTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLEL 618

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              ++         TY  +I GLCK  +L+ +C+L   +   G  PD V+ +T+I   CK
Sbjct: 619 LSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCK 678

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
              M KA  L   M   N  P+ VT+  L+ GF
Sbjct: 679 ARDMRKAFQLYDKMLLHNLEPTSVTYNILINGF 711



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 245/476 (51%), Gaps = 7/476 (1%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V ++L     +  +   A  VL ++    F  +  T+N L+  L     IM    ++ ++
Sbjct: 181 VWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNL-RHSNIM--WDVYNEI 237

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
            V     +  T + +++GLCR      A+  F++     G   +P VV++N+I+   CK 
Sbjct: 238 KVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTE---GKEFQPSVVSFNTIMSRYCKL 294

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           GFVD AK     M    + P+  +YN LI G C      EA  L  +M ++G++PD+VT+
Sbjct: 295 GFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTY 354

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N +       G ++    +++ M+ +G NP+ VTY  L+ G C +G +  A +L+  M+S
Sbjct: 355 NILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMIS 414

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            G +  + S  +L+ + CK ++V+ A  L+ EM +  +RP +ITY+TL+ GL + G +  
Sbjct: 415 HGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQ 474

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A+ L +KM  N ++P+S      + GLC+ G + +A   F  +      L I  YN +I+
Sbjct: 475 AILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMID 534

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G  K G  + A KL+ +L  KG  P +VT +++++  C   ++ +A  LL  ++     P
Sbjct: 535 GYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEP 594

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           + VT+ TL+  + +      ++ LL +M A+ +  + ++ +  V+  L K  K +E
Sbjct: 595 NAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTV-VIKGLCKQWKLQE 649



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 243/506 (48%), Gaps = 4/506 (0%)

Query: 25  SFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSF 84
           S G   + K D+ +H  +        L    +   +  N A      M+   P+P + ++
Sbjct: 331 SMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLI-NGAWNIIQKMLIKGPNPNLVTY 389

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           T+L+    +    +  + L+K + S+G    +    +L+  LCK      AF +   +  
Sbjct: 390 TVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEA 449

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
           +   P+ +T++ LI+GLC +G + +A  L++K+      PN +    ++ GLC       
Sbjct: 450 NGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQ 509

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A   F+ ++    ++   D++ YN +IDG  K G   +A +L  Q+ ++ I+P ++T+NS
Sbjct: 510 ARMYFDYLITSNLSL---DIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNS 566

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+ GFC      +A+ L   +  +G++P+ VT+  ++N  C++G M  +  LL  M  + 
Sbjct: 567 LMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKA 626

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + P  +TY  ++ G C   ++  + +L   M + G   D  SYN +I A CK + +  A 
Sbjct: 627 IGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAF 686

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            LY +ML   + P+ +TYN L++G    G+L DA  L+  +Q   V  + + + T I   
Sbjct: 687 QLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAH 746

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G V +AV  F+ +     E+ I  Y+ +I  LCK   +  A   F  +   G  PD 
Sbjct: 747 CAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQ 806

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDM 530
                +++   + G ++   +LL +M
Sbjct: 807 DLFEVLLNAFHQCGHLNSEFELLAEM 832



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 232/457 (50%), Gaps = 5/457 (1%)

Query: 148 TPNT-VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           TP +  T + +++GLC + R  +A   F+        P+VV+FNT+++  C+     VA 
Sbjct: 242 TPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAK 301

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
             F  M+   G +  PD  +YN +I GLC  G + +A +L   M++  + P+++TYN L 
Sbjct: 302 SFFCMMLKH-GLL--PDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILA 358

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            GF  +     A  +  +M+  G  P++VT+  +I  +C+ G +++  +L + MI  G  
Sbjct: 359 KGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQ 418

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
              ++   L+   C   ++  A +LF  M + G R D+ +Y+ LI+  CK  +V+ A+ L
Sbjct: 419 LSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILL 478

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           Y +M S RI P+ + +  +L GL + G +  A    D +  +++  D   +   IDG  K
Sbjct: 479 YEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIK 538

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G   EAV++++ +        I T+N L+ G C   +L  A +L   ++  G  P+ VT
Sbjct: 539 RGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVT 598

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            +T+++  C+EG M    +LL +M+AK   P+ +T+  +++G  +  K  +   LL  M 
Sbjct: 599 YTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMD 658

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
           A  L    +S ++ ++    K +  R+    +  +L 
Sbjct: 659 AVGLTPDQVSYNT-IIQAFCKARDMRKAFQLYDKMLL 694


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/316 (37%), Positives = 186/316 (58%), Gaps = 7/316 (2%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ VTF  L+NGLC EGR+++A  L  ++      P    + T+INGLC+  +T  AL L
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M        K  VV YN+IID LCKDG    A+ L  +M D+ I P+VITY+ +I  
Sbjct: 64  LSKMEETH---IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           FC    W +A+ L  +M++  + PDVVTF+A+IN   K+GK+ +   +   M++RG+ P 
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           T+TYNS++DGFC   R++ A+ +  SM SK C  DV +++ LIN  CK ++V++ + ++ 
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM    I  + +TY TL+ G  QVG+L  A  L++ M  + V P+  TF + +  LC   
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300

Query: 449 FVLEAVQVFQAIRNCK 464
            + +A  + + ++  +
Sbjct: 301 ELRKAFAILEDLQKSE 316



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 171/312 (54%), Gaps = 4/312 (1%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C+PDVVT+ ++++GLC +G V +A  L+ +M +    P    Y ++I G C + D + A 
Sbjct: 6   CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L  +M +  ++  VV +NA+I+  CKDG       L   M  +G+ PD +TY+ ++D F
Sbjct: 62  NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  GR + A +L   M+ +    DV +++ LINA  K+ KV +A  +Y +ML   I P+ 
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           ITYN+++ G  +   L DA +++D M      PD  TF+T I+G CK   V   +++F  
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +          TY  LI+G C++G L  A  L + +   G  P+ +T  +M+  LC + +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301

Query: 520 MDKANDLLLDME 531
           + KA  +L D++
Sbjct: 302 LRKAFAILEDLQ 313



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 168/318 (52%), Gaps = 7/318 (2%)

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
             G  PD+     L+N LC  G    A  ++ R++     P    +  +INGLC  G   
Sbjct: 3   ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTE 58

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
            A  L  K+       +VV +N +I+ LC+  + + A  LF EM ++ G    PDV+TY+
Sbjct: 59  SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIF--PDVITYS 115

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +ID  C+ G    A++LL  M +R INP+V+T+++LI          EA+ ++ +M+  
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G+ P  +T+N+MI+  CK  +++   R+L+ M  +  +PD VT+++L++G+C   R+   
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            E+F  M  +G   +  +Y  LI+  C+   ++ A  L   M+S  + P+ IT+ ++L+ 
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295

Query: 409 LFQVGNLGDALKLIDKMQ 426
           L     L  A  +++ +Q
Sbjct: 296 LCSKKELRKAFAILEDLQ 313



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 162/316 (51%), Gaps = 4/316 (1%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M +    P+V+T+ +L+ G CC     +A  L   M++ G QP    +  +IN  CK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
            +    LL  M +  +    V YN+++D  C  G    A+ LF  M  KG   DV +Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           +I++ C+  +  DA  L R+M+  +I P V+T++ L++ L + G + +A ++   M    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P + T+ + IDG CK   + +A ++  ++ +  C   + T++ LING CK  R+    
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++F  +  +G + + VT +T+IH  C+ G +D A DLL  M +    P+ +TF ++L   
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 550 VQNNKKSKVVVLLHKM 565
               +  K   +L  +
Sbjct: 297 CSKKELRKAFAILEDL 312



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 152/303 (50%), Gaps = 4/303 (1%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M++ G +PDVVTF  ++N  C +G++ +   L++ M++ G  P    Y ++++G C +G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
              A  L   M     +  V  YN +I+  CKD     A  L+ EM  + I P VITY+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           ++    + G   DA +L+  M    + PD  TF+  I+ L K G V EA +++  +    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                 TYN +I+G CK  RL  A ++   +  K   PDVVT ST+I+  CK  ++D   
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           ++  +M  +  V + VT+ TL+ GF Q         LL+ M +  +  + ++  S +  L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 585 LSK 587
            SK
Sbjct: 297 CSK 299



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 127/235 (54%), Gaps = 3/235 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  ++  L K+  +    +LF  ++  G+FPD+   + +I+  C+ G  + A  +L  ++
Sbjct: 79  YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                P+ VTF+ LIN L  EG++ EA  ++  +      P  +T+N++I+G C+     
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A ++ + M ++    C PDVVT++++I+G CK   VD   E+  +M  R I  N +TY 
Sbjct: 199 DAKRMLDSMASKS---CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 255

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           +LI GFC V D   A+ L   M+ +GV P+ +TF +M+   C   ++ K   +LE
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILE 310



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 110/200 (55%), Gaps = 3/200 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +++ ++    ++ ++     L + +    + PD+   + LIN L K G  S A  +
Sbjct: 109 PDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEI 168

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            G +LR    P T+T+N +I+G C + R+ +A R+   +   +C P+VVTF+TLING C+
Sbjct: 169 YGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +     +++F EM +  G +   + VTY ++I G C+ G +D A++LL  M    + PN
Sbjct: 229 AKRVDNGMEIFCEM-HRRGIV--ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285

Query: 259 VITYNSLICGFCCVDDWKEA 278
            IT+ S++   C   + ++A
Sbjct: 286 YITFQSMLASLCSKKELRKA 305



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 4/200 (2%)

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M+    RP V+T+ TL++GL   G +  AL L+D+M      P    + T I+GLCK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
              A+ +   +     +  +  YN +I+ LCK G    A  LF  +  KG  PDV+T S 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           MI   C+ G+   A  LL DM  +   P  VTF  L+   V+  K S+   +   M    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 570 LVVSDLSLSSKVVDLLSKDK 589
           +  + ++ +S +     +D+
Sbjct: 177 IFPTTITYNSMIDGFCKQDR 196



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 5/211 (2%)

Query: 41  FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
           F D  + +  ++   +SG  T  E +     MI+ + +P + +F+ L+  L K  +    
Sbjct: 108 FPDVITYSGMIDSFCRSGRWTDAEQL--LRDMIERQINPDVVTFSALINALVKEGKVSEA 165

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
             ++  +   G+FP     N +I+  CK    + A  +L  +     +P+ VTF+ LING
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
            C   R+     +F +++      N VT+ TLI+G C+  +   A  L   M++   A  
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA-- 283

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
            P+ +T+ S++  LC    + KA  +L  ++
Sbjct: 284 -PNYITFQSMLASLCSKKELRKAFAILEDLQ 313



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 2/175 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + +  +N   K G ++  E +Y    M++    P   ++  ++    K  + +    
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIY--GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKR 202

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   + S    PD+   + LIN  CK         +   + R     NTVT+  LI+G C
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
             G +  A  L   +      PN +TF +++  LC  +    A  + E++    G
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEG 317


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 218/427 (51%), Gaps = 9/427 (2%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           + V+ L + +   GL P+ +  N +I  LCK G  + A  VL  ++     P+ V +  L
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           I+G C  G +  A RLF ++      P+ +T+  +I GLC+T   + A KLF EMV    
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV---- 320

Query: 218 AICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
             CK   PD VTY ++IDG CK+G + +A  L  QM    + PN++TY +L  G C   +
Sbjct: 321 --CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 378

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
              A  L  EM   G++ ++ T+N+++N  CK G +D+  +L++ M   G +PD VTY +
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           LMD +C    + RA EL   M+ +  +  V ++N+L+N  C    +ED   L + ML + 
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I P+  TYN+L+       N+    ++   M    VVPD  T+   I G CK   + EA 
Sbjct: 499 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            + + +      L + +YN LI G  K  +   A +LF +++ +G + D    +      
Sbjct: 559 FLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADIN 618

Query: 515 CKEGQMD 521
             EG+M+
Sbjct: 619 YDEGKME 625



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 205/401 (51%), Gaps = 3/401 (0%)

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
           +L +++ +    PN  T+N +I  LC+T     A ++  EM++E  A   PD V Y ++I
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA---PDGVIYTTLI 265

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           DG CK G V  A  L  +M+ R I+P+ ITY ++ICG C      EA  LF EM+   ++
Sbjct: 266 DGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 325

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PD VT+ A+I+  CK+GKM +   L   M+Q G+ P+ VTY +L DG C  G +  A EL
Sbjct: 326 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 385

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              M  KG   ++Y+YN L+N  CK   ++ AV L ++M      P  +TY TL+    +
Sbjct: 386 LHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCK 445

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
              +  A +L+ +M   ++ P   TF   ++G C +G + +  ++ + +          T
Sbjct: 446 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 505

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN LI   C    ++   +++  +  KG +PD  T + +I   CK   M +A  L  DM 
Sbjct: 506 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMV 565

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            K    +  ++  L++GF +  K  +   L  +M  E LV 
Sbjct: 566 GKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVA 606



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 221/440 (50%), Gaps = 15/440 (3%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           +KP+P   +  ILL  L K  +      + + + S G+ PD  +   LI+  CK+G  S 
Sbjct: 219 LKPNPYTYNGVILL--LCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 276

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A+ +   + +   +P+ +T+  +I GLC  GR+MEA +LF ++     +P+ VT+  LI+
Sbjct: 277 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 336

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           G C+      A  L  +M+ + G    P++VTY ++ DGLCK G VD A ELL +M  + 
Sbjct: 337 GYCKEGKMKEAFSLHNQML-QMGLT--PNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           +  N+ TYNSL+ G C   +  +A  L  +M   G  PD VT+  +++  CK  +M + +
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 453

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            LL  M+ R + P  VT+N LM+GFC+ G +    +L   M+ KG   +  +YN LI   
Sbjct: 454 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 513

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C    +     +YR M ++ + P   TYN L+ G  +  N+ +A  L       D+V   
Sbjct: 514 CIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFL-----HRDMVGKG 568

Query: 435 F--TFATY---IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           F  T ++Y   I G  K    LEA ++F+ +R        E YN   +     G+++   
Sbjct: 569 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTL 628

Query: 490 KLFHRLQHKGPIPDVVTCST 509
           +L      K  + D+ T +T
Sbjct: 629 ELCDEAIEKCLVGDIQTKNT 648



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 226/440 (51%), Gaps = 14/440 (3%)

Query: 170 AARLFKKL-------NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
           A +LF K+       +V +C+  +   +  ++G+         LKL EEM  +   + KP
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEM--QIKGL-KP 221

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +  TYN +I  LCK G V +A+ +L +M    I P+ + Y +LI GFC + +   A  LF
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM    + PD +T+ A+I   C+ G++ + ++L   M+ + + PD VTY +L+DG+C  
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G++  A  L   M+  G   ++ +Y  L +  CK  +V+ A  L  EM  + +  ++ TY
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 401

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N+L++GL + GN+  A+KL+  M++    PD+ T+ T +D  CK+  ++ A ++ + + +
Sbjct: 402 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD 461

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
            + +  + T+N L+NG C  G L+   KL   +  KG +P+  T +++I   C    M  
Sbjct: 462 RELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRA 521

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
             ++   M AK  VP   T+  L++G  +  +  K    LH+    K     +S  + ++
Sbjct: 522 TTEIYRGMCAKGVVPDGNTYNILIKGHCK-ARNMKEAWFLHRDMVGKGFNLTVSSYNALI 580

Query: 583 DLLSKDKKY---RECLNQFR 599
               K KK+   RE   Q R
Sbjct: 581 KGFYKRKKFLEARELFEQMR 600



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 185/382 (48%), Gaps = 5/382 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG      ++   K GN++S  A   FD M K K SP   ++T ++  L +  +      
Sbjct: 257 DGVIYTTLIDGFCKLGNVSS--AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 314

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF  +    L PD      LI+  CK G    AF +  ++L+   TPN VT+  L +GLC
Sbjct: 315 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 374

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G +  A  L  ++     + N+ T+N+L+NGLC+  N   A+KL ++M  E      P
Sbjct: 375 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM--EVAGF-HP 431

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           D VTY +++D  CK   + +A ELL QM DR + P V+T+N L+ GFC     ++ + L 
Sbjct: 432 DAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLL 491

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M++ G+ P+  T+N++I   C    M     +   M  +GV PD  TYN L+ G C  
Sbjct: 492 KWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKA 551

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             +  A  L   MV KG    V SYN LI    K +K  +A  L+ +M  E +      Y
Sbjct: 552 RNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 611

Query: 403 NTLLSGLFQVGNLGDALKLIDK 424
           N      +  G +   L+L D+
Sbjct: 612 NIFADINYDEGKMELTLELCDE 633



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 3/341 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F  M+  +  P   ++T L+    K  +     SL  ++   GL P++     L 
Sbjct: 311 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 370

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G    A  +L  + R     N  T+N L+NGLC  G I +A +L K + V    
Sbjct: 371 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 430

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++  C++R  + A +L  +M++      +P VVT+N +++G C  G ++  
Sbjct: 431 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDR---ELQPTVVTFNVLMNGFCMSGMLEDG 487

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           ++LL  M ++ I PN  TYNSLI  +C  ++ +    ++  M   GV PD  T+N +I  
Sbjct: 488 EKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG 547

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           +CK   M +   L   M+ +G N    +YN+L+ GF    +   ARELF  M  +G   D
Sbjct: 548 HCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVAD 607

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
              YNI  + N  + K+E  + L  E + + +   + T NT
Sbjct: 608 REIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 122/244 (50%), Gaps = 7/244 (2%)

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQ-------KVEDAVCLYREMLSERIRP 397
           +S AR+LF  M++ G    V S N+ I+   +D        K E  + L  EM  + ++P
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +  TYN ++  L + G + +A +++ +M    + PD   + T IDG CK G V  A ++F
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             ++  K      TY  +I GLC+ GR+  A KLFH +  K   PD VT + +I   CKE
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G+M +A  L   M      P+ VT+  L  G  +  +      LLH+M  + L ++  + 
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 401

Query: 578 SSKV 581
           +S V
Sbjct: 402 NSLV 405


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/547 (28%), Positives = 259/547 (47%), Gaps = 40/547 (7%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P ++S  +LL  L    ++  V   F  L S G  PD F  N  +      G    A 
Sbjct: 125 PLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAV 184

Query: 137 VVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
            +L R+ R     PN  ++N +I G+   GR  +A  +F ++   A  PN +T+NT+I+G
Sbjct: 185 GMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDG 244

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
             +  +     +L ++MV       KP+ +TYN ++ GLC+ G + +   LL +M  + +
Sbjct: 245 HIKGGDLEAGFRLRDQMVCHG---LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 301

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P+  TY+ L  G     D K    LF + + NGV     T + ++N  CKDGK+     
Sbjct: 302 VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 361

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           +L+ ++  G+ P  V YN+L++G+C  G +  A   F  M S+  + D  +YN LIN  C
Sbjct: 362 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 421

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K +++ +A  L  EM    + P+V T+NTL+    + G L     ++ +MQ N + P+  
Sbjct: 422 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 481

Query: 436 TFATYIDGLCKNGFVLEAV---------------QVFQAIRNCKCE-------------- 466
           ++ + ++  CKNG + EAV               QV+ AI +   E              
Sbjct: 482 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 541

Query: 467 ------LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                   I TYN LI GLC   ++  A ++ + L +   IPD V+ +T+I   C  G +
Sbjct: 542 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 601

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           DKA DL   M       +  T+  L+ G     + +++  L  KM    +V S+ ++ + 
Sbjct: 602 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNI 660

Query: 581 VVDLLSK 587
           +V+  SK
Sbjct: 661 MVEAYSK 667



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 233/489 (47%), Gaps = 32/489 (6%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P   S+ +++  + +  +    V +F  +    + P+    N +I+   K G     F
Sbjct: 196 PPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF 255

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  +++     PN +T+N L++GLC  GR+ E + L  ++      P+  T++ L +GL
Sbjct: 256 RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 315

Query: 197 CRTRNTLVALKLFEEMVNE------------FGAICK--------------------PDV 224
            R  ++   L LF + +                 +CK                    P  
Sbjct: 316 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 375

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           V YN++I+G C+ G ++ A     QMK R+I P+ ITYN+LI G C  +    A+ L +E
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M DNGV P V TFN +I+   + G+++K   +L  M + G+ P+ V+Y S+++ FC  G+
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 495

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           I  A  +   M  K    +   YN +I+A  +    + A  L  +M S  I PS++TYN 
Sbjct: 496 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 555

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ GL     + +A ++I+ +  + ++PD+ ++ T I   C  G + +A+ + Q +    
Sbjct: 556 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 615

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +  + TY+ LI+GL   GRL     L+ ++     +P     + M+    K G   KA 
Sbjct: 616 IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAE 675

Query: 525 DLLLDMEAK 533
           DL  +M  K
Sbjct: 676 DLRKEMLQK 684



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 175/358 (48%), Gaps = 3/358 (0%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           S N  S   +  F   +K   + G  + +ILL  L K+ +      + + L + GL P  
Sbjct: 316 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 375

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            + N LIN  C+ G   GAF   G++      P+ +T+N LINGLC   RI  A  L  +
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +     +P V TFNTLI+   RT        +  EM  E G   KP+VV+Y SI++  CK
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM-QENG--LKPNVVSYGSIVNAFCK 492

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +G + +A  +L  M  +++ PN   YN++I  +       +A  L  +M  NG+ P +VT
Sbjct: 493 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 552

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I   C   ++ +   ++  +    + PD V+YN+L+   C  G I +A +L   M 
Sbjct: 553 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 612

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
             G +  V +Y+ LI+      ++ +   LY++M+   + PS   +N ++    + GN
Sbjct: 613 KYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 670



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 3/295 (1%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  M      P   ++  L+  L K ++      L   +  NG+ P +   N LI+   +
Sbjct: 398 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 457

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G     F+VL  +  +   PN V++  ++N  C  G+I EA  +   +      PN   
Sbjct: 458 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 517

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N +I+          A  L E+M +       P +VTYN +I GLC    + +A+E++ 
Sbjct: 518 YNAIIDAYVEHGPNDQAFILVEKMKSNG---ISPSIVTYNLLIKGLCNQSQISEAEEIIN 574

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            + +  + P+ ++YN+LI   C   +  +A  L   M   G++  V T++ +I+     G
Sbjct: 575 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 634

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           +++++  L + M+Q  V P    +N +++ +   G   +A +L   M+ K   HD
Sbjct: 635 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 689


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 237/497 (47%), Gaps = 8/497 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGL-FPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           F  LL  L++       + LF  ++ +    P     N +I  LC+    + A   L  +
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +RS + P+  TFN LI G C   ++  A  LF K+ +     +VV++ TLI GLC     
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR- 238

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
                  +E V  FG + +PD+  Y +++ GLC     ++   +L +MK+    P+   Y
Sbjct: 239 ------IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAY 292

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            +++   C     KEA+ +  EM + G+ P VVT  A+IN  CK+G+M    R+LELM  
Sbjct: 293 AAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKL 352

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RG  P+  TYN+L+ GFC  G++ +A  L   M + G   D  +YN+LI   C D  +E 
Sbjct: 353 RGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES 412

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A  L R M  + +     TYN L++ L + G    A  L D ++   + P++ TF + I+
Sbjct: 413 AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLIN 472

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK+G    A +  + + +  C     TY+  I  LCKM   +        +  K   P
Sbjct: 473 GLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 532

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
             V  + +IH L KE           +M +  C P  VT+ T +R +    + ++   +L
Sbjct: 533 STVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVL 592

Query: 563 HKMAAEKLVVSDLSLSS 579
            +M+   + V  ++ ++
Sbjct: 593 MEMSKNGVTVDTMAYNT 609



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 237/491 (48%), Gaps = 7/491 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P+P   ++  ++  L +       +     +  +G  PD +  N LI   C+      A 
Sbjct: 149 PAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVAR 208

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  ++    F  + V++  LI GLC  GRI EA  LF +++     P++  +  L+ GL
Sbjct: 209 DLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGL 264

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C        L +   M  E G   +P    Y +++D  C++    +A+E+L +M ++ + 
Sbjct: 265 CNAERGEEGLLMLRRM-KELG--WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLA 321

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P V+T  ++I  +C      +A  +   M   G +P+V T+NA++   C +GK+ K   L
Sbjct: 322 PCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTL 381

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L  M   GVNPD VTYN L+ G C+ G I  A  L   M   G   D Y+YN LINA CK
Sbjct: 382 LNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 441

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           D + + A  L+  + +  I+P+ +T+N+L++GL + G    A K ++KM      PD++T
Sbjct: 442 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYT 501

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++++I+ LCK     E +     +     +     Y  +I+ L K        + +  + 
Sbjct: 502 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 561

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
             G  PDVVT +T +   C EG++++A ++L++M         + + TL+ G     +  
Sbjct: 562 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 621

Query: 557 KVVVLLHKMAA 567
             V +L +M +
Sbjct: 622 HAVSILKQMTS 632



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 244/524 (46%), Gaps = 23/524 (4%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + EA      M +   +P + + T ++    K  +    + + + +   G  P+++  N 
Sbjct: 305 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 364

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+   C  G    A  +L ++      P+ VT+N LI G C +G I  A RL + +    
Sbjct: 365 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 424

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              +  T+N LIN LC+   T  A  LF+ +  E   I KP+ VT+NS+I+GLCK G  D
Sbjct: 425 LIADQYTYNALINALCKDGRTDQACSLFDSL--ETRGI-KPNAVTFNSLINGLCKSGKAD 481

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A + L +M      P+  TY+S I   C +   +E      EM+   V+P  V +  +I
Sbjct: 482 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 541

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K+     V R    M+  G NPD VTY + M  +C+ GR++ A  + + M   G  
Sbjct: 542 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 601

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL--------------- 406
            D  +YN L++ +    + + AV + ++M S    P+  TY  LL               
Sbjct: 602 VDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPL 661

Query: 407 --SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
             +G+++   L D   L D M+ N+ +P+S T+++ ++G  ++G   EA  +   ++   
Sbjct: 662 TPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDS 721

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
             L  + Y  L+   CK  R   A  L   +   G IP +++   ++  L  EGQ DKA 
Sbjct: 722 ISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAK 781

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS---KVVVLLHKM 565
           ++ ++   K+  P E+ +  ++ G ++        +++++L +M
Sbjct: 782 EIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERM 825



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 258/542 (47%), Gaps = 27/542 (4%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            FD M     +  + S+  L+  L +  + D  V LF  ++     PD+ +   L+  LC
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLC 265

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
                    ++L R+    + P+T  +  +++  C E +  EA  + +++      P VV
Sbjct: 266 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T   +IN  C+      AL++ E M       CKP+V TYN+++ G C +G V KA  LL
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRG---CKPNVWTYNALVQGFCNEGKVHKAMTLL 382

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-NGVQPDVVTFNAMINYNCK 306
            +M+   +NP+ +TYN LI G  C+D   E+    + +M+ +G+  D  T+NA+IN  CK
Sbjct: 383 NKMRACGVNPDAVTYNLLIRG-QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 441

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           DG+ D+   L + +  RG+ P+ VT+NSL++G C  G+   A +    MVS GC  D Y+
Sbjct: 442 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYT 501

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y+  I   CK +  ++ +    EML + ++PS + Y  ++  L +  N G   +   +M 
Sbjct: 502 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 561

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            +   PD  T+ T +   C  G + EA  V   +      +    YN L++G   +G+  
Sbjct: 562 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 621

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCK-----------EGQMDKANDL-----LLDM 530
            A  +  ++     +P+  T   ++  L +              + KA +L     L D+
Sbjct: 622 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 681

Query: 531 EAKN-CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
             KN  +P+  T+ ++L GF ++ +  +   L+  M  + + +++  + + +V    K K
Sbjct: 682 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNE-DIYTALVTCFCKSK 740

Query: 590 KY 591
           +Y
Sbjct: 741 RY 742



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 192/488 (39%), Gaps = 90/488 (18%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L+       +    ++L  ++ + G+ PD    NLLI   C  G    AF +
Sbjct: 357 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 416

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +       +  T+N LIN LC +GR  +A  LF  L      PN VTFN+LINGLC+
Sbjct: 417 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 476

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-------- 250
           +    +A K  E+MV+   A C PD  TY+S I+ LCK     +    + +M        
Sbjct: 477 SGKADIAWKFLEKMVS---AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS 533

Query: 251 ------------KDRNI---------------NPNVITYNSLICGFCCVDDWKEAKCLFI 283
                       K+RN                NP+V+TY + +  +C      EA+ + +
Sbjct: 534 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 593

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDK------------------------------- 312
           EM  NGV  D + +N +++ +   G+ D                                
Sbjct: 594 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 653

Query: 313 ---------------------VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
                                V  L ++M +    P++ TY+S+++GF   GR   A  L
Sbjct: 654 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 713

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              M       +   Y  L+   CK ++  DA  L   M+     P +++Y  LLSGL  
Sbjct: 714 VSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLIC 773

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G    A ++    +  D  PD   +   IDGL K G    + ++   +    C    +T
Sbjct: 774 EGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQT 833

Query: 472 YNCLINGL 479
           Y  L   L
Sbjct: 834 YAMLTEEL 841



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 150/310 (48%), Gaps = 5/310 (1%)

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           P   T+NA+I   C+   + +  R L LM++ G  PD  T+NSL+ G+C   ++  AR+L
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M  +G   DV SY  LI   C+  ++++AV L+ EM     +P +  Y  L+ GL  
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM----DQPDMHMYAALVKGLCN 266

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
                + L ++ +M+     P +  +A  +D  C+     EA ++ Q +        + T
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
              +IN  CK GR+  A ++   ++ +G  P+V T + ++   C EG++ KA  LL  M 
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
           A    P  VT+  L+RG   +        LL  M  + L+    + ++ +++ L KD + 
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNA-LINALCKDGRT 445

Query: 592 RECLNQFRHL 601
            +  + F  L
Sbjct: 446 DQACSLFDSL 455



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 150/323 (46%), Gaps = 14/323 (4%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S E + F   M++    P   ++TI++  L K + Y  V   +  + S+G  PD+     
Sbjct: 515 SQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTT 574

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            +   C  G  + A  VL  + ++  T +T+ +N L++G  + G+   A  + K++   A
Sbjct: 575 SMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVA 634

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFE-------EMVNEFGA--ICK-----PDVVTY 227
             PN  T+  L+  L R R     L L         E+ + FG   + K     P+  TY
Sbjct: 635 SVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 694

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           +SI++G  +DG  ++A  L+  MK+ +I+ N   Y +L+  FC    + +A  L   M+ 
Sbjct: 695 SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQ 754

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           +G  P ++++  +++    +G+ DK   +      +  +PD + +  ++DG    G    
Sbjct: 755 HGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDI 814

Query: 348 ARELFVSMVSKGCRHDVYSYNIL 370
           +RE+ + +    CR    +Y +L
Sbjct: 815 SREMIIMLERMNCRPSHQTYAML 837


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 252/491 (51%), Gaps = 6/491 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M      P + ++++L+    K +  +TVV L   + + G+ P+++   + I
Sbjct: 189 EAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICI 248

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L + G    A+ +L ++      P+ VT   LI  LC  GR+ +A  +F K+      
Sbjct: 249 RVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQK 308

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD-VVTYNSIIDGLCKDGFVDK 242
           P+ VT+ TL++    + ++    +   E+ N   A    D VV+Y + +D LC+ G VD+
Sbjct: 309 PDRVTYITLLDKCGDSGDS----RSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDE 364

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++  +MK + I P   +YNSLI GF   D +  A  LF  M  +G  P+  T    IN
Sbjct: 365 ALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFIN 424

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           Y+ K G+  K  +  ELM  +G+ PD V  N+++ G    GR+  A+ +F  + + G   
Sbjct: 425 YHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISP 484

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +Y ++I    K    ++A+ ++ EM+  R  P V+  N+L+  L++ G   +A K+ 
Sbjct: 485 DNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIF 544

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +++  ++ P   T+ T + GL + G V E +Q+ + + +      I TYN +++ LCK 
Sbjct: 545 YELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKN 604

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G +  A  + + +   G +PD+ + +T+++ L KE ++D+A  +   M+ K   P   T 
Sbjct: 605 GEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYATV 663

Query: 543 CTLLRGFVQNN 553
           CT+L  FV++ 
Sbjct: 664 CTILPSFVRSG 674



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/570 (24%), Positives = 265/570 (46%), Gaps = 41/570 (7%)

Query: 69   FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
            F  +  M  SP   ++T+++   +K    D  + +F  +  N   PD+  +N LI+ L K
Sbjct: 474  FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533

Query: 129  MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
             G  + A+ +   +      P   T+N L+ GL  EG++ E  +L + +N  +  PN++T
Sbjct: 534  AGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIIT 593

Query: 189  FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
            +NT+++ LC+      AL +   M       C PD+ +YN+++ GL K+  +D+A  +  
Sbjct: 594  YNTVLDCLCKNGEVNYALDMLYSMTMNG---CMPDLSSYNTVMYGLVKEDRLDEAFWMFC 650

Query: 249  QMKDRNINPNVITYNSLICGF---------------------CCVD-------------- 273
            QMK + + P+  T  +++  F                       VD              
Sbjct: 651  QMK-KVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKR 709

Query: 274  DWKEAKCLFIE-MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
            D  E    F E +  +G+  D +  + +I + CK  +    + L++     GV+  T +Y
Sbjct: 710  DGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSY 769

Query: 333  NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
            N+L+ G      I  A ELF  M   GC  D ++Y+++++A  K  ++ED + +  EM +
Sbjct: 770  NALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHN 829

Query: 393  ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
            +  + + +TYNT++SGL +   L +A+ L  ++      P   T+   +DGL K+G + +
Sbjct: 830  KGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIED 889

Query: 453  AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
            A  +F  +  C CE     YN L+NG    G  +  C+LF  +  +G  PD+ + + +I 
Sbjct: 890  AEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVID 949

Query: 513  WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             LC +G+++        +      P  +T+  L+ G  ++ +  + + L + M  +K + 
Sbjct: 950  TLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDM-EKKGIA 1008

Query: 573  SDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             +L   + ++  L K  K  E    +  LL
Sbjct: 1009 PNLYTYNSLILYLGKAGKAAEAGKMYEELL 1038



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 255/530 (48%), Gaps = 40/530 (7%)

Query: 55   HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
            +K+G    NEA   F  + +M   P   ++  LL  L +  +   V+ L + +NSN   P
Sbjct: 532  YKAGR--GNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPP 589

Query: 115  DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
            ++   N +++CLCK G  + A  +L  +  +   P+  ++N ++ GL  E R+ EA  +F
Sbjct: 590  NIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMF 649

Query: 175  KKLN-VFACD--------PNVV--------------------------TFNTLINGLCRT 199
             ++  V A D        P+ V                          + ++L+ G+ + 
Sbjct: 650  CQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKR 709

Query: 200  RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
              T  +++ F E +   G +   D +  + II  LCK      A EL+ + ++  ++   
Sbjct: 710  DGTEKSIE-FAENIASSGLLL--DDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKT 766

Query: 260  ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
             +YN+LICG    D    A+ LF EM   G  PD  T++ +++   K  +++ + ++ E 
Sbjct: 767  GSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEE 826

Query: 320  MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
            M  +G     VTYN+++ G      +  A  L+  ++S+G      +Y  L++   KD  
Sbjct: 827  MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886

Query: 380  VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            +EDA  L+ EML     P+   YN LL+G    G+     +L + M    + PD  ++  
Sbjct: 887  IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946

Query: 440  YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
             ID LC +G + + +  F+ + +   E  + TYN LI+GL K GRL+ A  L++ ++ KG
Sbjct: 947  VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006

Query: 500  PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
              P++ T +++I +L K G+  +A  +  ++ AK   P+  T+  L+RG+
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGY 1056



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 238/545 (43%), Gaps = 72/545 (13%)

Query: 129 MGITSG---AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           +G+  G   A V L  +  +    N  T+N LI  L   G   EA  ++K +      P 
Sbjct: 146 VGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPT 205

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEM------------------VNEFGAI-------- 219
           V T++ L+    + R+    + L  EM                  + + G +        
Sbjct: 206 VRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILR 265

Query: 220 ------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
                 CKPDVVT   +I  LC  G +  AK++  +MK  +  P+ +TY +L+       
Sbjct: 266 KMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSG 325

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           D +    ++  +  +G   +VV++ A ++  C+ G++D+   + + M Q+G+ P   +YN
Sbjct: 326 DSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYN 385

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           SL+ GF    R +RA ELF  M   G   + Y++ + IN + K  +   A+  Y  M S+
Sbjct: 386 SLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSK 445

Query: 394 RIRPSVITYNTLLSGLFQVGNLG-----------------------------------DA 418
            I P V+  N +L GL + G LG                                   +A
Sbjct: 446 GIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEA 505

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           +K+  +M  N   PD     + ID L K G   EA ++F  ++    E    TYN L+ G
Sbjct: 506 MKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAG 565

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L + G++K   +L   +      P+++T +T++  LCK G+++ A D+L  M    C+P 
Sbjct: 566 LGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD 625

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             ++ T++ G V+ ++  +   +  +M  +K++  D +    ++    +    +E L+  
Sbjct: 626 LSSYNTVMYGLVKEDRLDEAFWMFCQM--KKVLAPDYATVCTILPSFVRSGLMKEALHTV 683

Query: 599 RHLLF 603
           R  + 
Sbjct: 684 REYIL 688



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 171/350 (48%), Gaps = 3/350 (0%)

Query: 157  LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
            +I  LC     + A  L KK           ++N LI GL       +A +LF EM    
Sbjct: 737  IIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEM-KRL 795

Query: 217  GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
            G  C PD  TY+ I+D + K   ++   ++  +M ++      +TYN++I G        
Sbjct: 796  G--CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLD 853

Query: 277  EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
            EA  L+ ++M  G  P   T+  +++   KDG ++    L + M++ G  P+   YN L+
Sbjct: 854  EAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILL 913

Query: 337  DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
            +G+ + G   +  ELF SMV +G   D+ SY ++I+  C D ++ D +  ++++    + 
Sbjct: 914  NGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLE 973

Query: 397  PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
            P +ITYN L+ GL + G L +AL L + M+   + P+ +T+ + I  L K G   EA ++
Sbjct: 974  PDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKM 1033

Query: 457  FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            ++ +     +  + TYN LI G    G  + A   + R+   G  P+  T
Sbjct: 1034 YEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSST 1083



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/496 (23%), Positives = 226/496 (45%), Gaps = 41/496 (8%)

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
           F+ + R  R   T  T + N+++  + A GR+ + A++F  +       NV TF T+  G
Sbjct: 88  FLSVARQPRVVHT--TESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVF-G 144

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
                  L +  +   ++ E G +   +  TYN +I  L K GF  +A ++   M    +
Sbjct: 145 AVGVEGGLRSAPVALPVMKEAGIVL--NAYTYNGLIYFLVKSGFDREAMDVYKAMAADGV 202

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P V TY+ L+  F    D +    L  EM   GV+P+V ++   I    + G++++  R
Sbjct: 203 VPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYR 262

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK----------------- 358
           +L  M + G  PD VT   L+   C  GR++ A+++F  M +                  
Sbjct: 263 ILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCG 322

Query: 359 ------------------GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                             G   +V SY   ++A C+  +V++A+ ++ EM  + I P   
Sbjct: 323 DSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQY 382

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YN+L+SG  +      AL+L + M ++   P+ +T   +I+   K+G  L+A++ ++ +
Sbjct: 383 SYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELM 442

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           ++      +   N ++ GL K GRL  A ++FH L+  G  PD +T + MI    K    
Sbjct: 443 KSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNA 502

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           D+A  +  +M    C P  +   +L+    +  + ++   + +++    L  +D + ++ 
Sbjct: 503 DEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTL 562

Query: 581 VVDLLSKDKKYRECLN 596
           +   L ++ K +E + 
Sbjct: 563 LAG-LGREGKVKEVMQ 577



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 182/391 (46%), Gaps = 38/391 (9%)

Query: 82   TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            +S   L+  + K    +  +   + + S+GL  D   L+ +I  LCK      A  ++ +
Sbjct: 697  SSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKK 756

Query: 142  ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN---------------- 185
                  +  T ++N LI GL  E  I  A  LF ++    CDP+                
Sbjct: 757  FENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMR 816

Query: 186  -------------------VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
                                VT+NT+I+GL +++    A+ L+ ++++E      P   T
Sbjct: 817  IEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEG---FSPTPCT 873

Query: 227  YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
            Y  ++DGL KDG ++ A+ L  +M +    PN   YN L+ G+    D ++   LF  M+
Sbjct: 874  YGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMV 933

Query: 287  DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            + G+ PD+ ++  +I+  C DG+++      + +   G+ PD +TYN L+ G    GR+ 
Sbjct: 934  EQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLE 993

Query: 347  RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
             A  L+  M  KG   ++Y+YN LI    K  K  +A  +Y E+L++  +P+V TYN L+
Sbjct: 994  EALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALI 1053

Query: 407  SGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             G    G+  +A     +M +    P+S T+
Sbjct: 1054 RGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 251/576 (43%), Gaps = 43/576 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N A+  F+ M    P+P   +  + +    K+ +    +  ++ + S G+ PD+   N +
Sbjct: 398 NRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAV 457

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  L K G    A  V   +     +P+ +T+  +I          EA ++F ++    C
Sbjct: 458 LYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRC 517

Query: 183 DPNVV-----------------------------------TFNTLINGLCRTRNTLVALK 207
            P+V+                                   T+NTL+ GL R       ++
Sbjct: 518 APDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQ 577

Query: 208 LFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           L E M  N F     P+++TYN+++D LCK+G V+ A ++L  M      P++ +YN+++
Sbjct: 578 LLEGMNSNSF----PPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVM 633

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM-DKVNRLLELMIQRGV 325
            G    D   EA  +F + M   + PD  T   ++    + G M + ++ + E ++Q   
Sbjct: 634 YGLVKEDRLDEAFWMFCQ-MKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDS 692

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             D  + +SLM+G        ++ E   ++ S G   D    + +I   CK ++   A  
Sbjct: 693 KVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHE 752

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           L ++  +  +     +YN L+ GL     +  A +L  +M+     PD FT+   +D + 
Sbjct: 753 LVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMG 812

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K+  + + +++ + + N   +    TYN +I+GL K   L  A  L+++L  +G  P   
Sbjct: 813 KSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPC 872

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T   ++  L K+G ++ A  L  +M    C P+   +  LL G+       KV  L   M
Sbjct: 873 TYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESM 932

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             E+ +  D+   + V+D L  D +  + L+ F+ L
Sbjct: 933 -VEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 156/308 (50%), Gaps = 3/308 (0%)

Query: 65   AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
            A   F  M ++   P   ++ ++L  + K+ + + ++ + + +++ G        N +I+
Sbjct: 785  AEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS 844

Query: 125  CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             L K  +   A  +  +++   F+P   T+  L++GL  +G I +A  LF ++    C+P
Sbjct: 845  GLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEP 904

Query: 185  NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
            N   +N L+NG     +T    +LFE MV +      PD+ +Y  +ID LC DG ++   
Sbjct: 905  NCAIYNILLNGYRIAGDTEKVCELFESMVEQG---MNPDIKSYTVVIDTLCADGRLNDGL 961

Query: 245  ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
                Q+ D  + P++ITYN LI G       +EA  L+ +M   G+ P++ T+N++I Y 
Sbjct: 962  SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYL 1021

Query: 305  CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
             K GK  +  ++ E ++ +G  P+  TYN+L+ G+ + G    A   +  M+  GCR + 
Sbjct: 1022 GKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNS 1081

Query: 365  YSYNILIN 372
             +Y  L N
Sbjct: 1082 STYMQLPN 1089



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 210/488 (43%), Gaps = 8/488 (1%)

Query: 62   SNEAVYFFDCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
            + E  Y  D +  M  +   P ++S+  ++  L K  + D    +F ++    L PD   
Sbjct: 604  NGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYAT 662

Query: 119  LNLLINCLCKMGITSGAF-VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
            +  ++    + G+   A   V   IL+     +  + + L+ G+       ++    + +
Sbjct: 663  VCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENI 722

Query: 178  NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                   + +  + +I  LC+ +  L A +L ++  N  G   K    +YN++I GL  +
Sbjct: 723  ASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFEN-LGVSLK--TGSYNALICGLVDE 779

Query: 238  GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
              +D A+EL  +MK    +P+  TY+ ++         ++   +  EM + G +   VT+
Sbjct: 780  DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTY 839

Query: 298  NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
            N +I+   K   +D+   L   ++  G +P   TY  L+DG    G I  A  LF  M+ 
Sbjct: 840  NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899

Query: 358  KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
             GC  +   YNIL+N        E    L+  M+ + + P + +Y  ++  L   G L D
Sbjct: 900  CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959

Query: 418  ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
             L    ++    + PD  T+   I GL K+G + EA+ ++  +        + TYN LI 
Sbjct: 960  GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019

Query: 478  GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
             L K G+   A K++  L  KG  P+V T + +I      G  + A      M    C P
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079

Query: 538  SEVTFCTL 545
            +  T+  L
Sbjct: 1080 NSSTYMQL 1087



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 149/331 (45%), Gaps = 42/331 (12%)

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK----DGKMDKVNRLLELMIQRGVNPDT 329
           D +EA  LF+ +     QP VV      NY  +     G++  V ++ +LM ++ +  + 
Sbjct: 80  DPEEALELFLSV---ARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANV 136

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            T+ ++     + G +  A      M   G   + Y+YN LI    K     +A+ +Y+ 
Sbjct: 137 GTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKA 196

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M ++ + P+V TY+ L+    +  +    + L+ +M+   V P+ +++   I  L + G 
Sbjct: 197 MAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGR 256

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + EA ++ + +    C+  + T   LI  LC  GRL  A  +F +++     PD VT  T
Sbjct: 257 LEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316

Query: 510 MIH--------------W---------------------LCKEGQMDKANDLLLDMEAKN 534
           ++               W                     LC+ G++D+A D+  +M+ K 
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +P + ++ +L+ GF++ ++ ++ + L + M
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHM 407



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            N+ + +F  +  M   P + ++ +L+  L K+ + +  +SL+  +   G+ P+L+  N L
Sbjct: 958  NDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSL 1017

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I  L K G  + A  +   +L   + PN  T+N LI G    G    A   + ++ V  C
Sbjct: 1018 ILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGC 1077

Query: 183  DPNVVTFNTLIN 194
             PN  T+  L N
Sbjct: 1078 RPNSSTYMQLPN 1089


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/321 (37%), Positives = 188/321 (58%), Gaps = 7/321 (2%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+ VTF  L+NGLC EGR+++A  L  ++      P    + T+INGLC+  +T  AL L
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +M        K  VV YN+IID LCKDG    A+ L  +M D+ I P+VITY+ +I  
Sbjct: 64  LSKMEETH---IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           FC    W +A+ L  +M++  + PDVVTF+A+IN   K+GK+ +   +   M++RG+ P 
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           T+TYNS++DGFC   R++ A+ +  SM SK C  DV +++ LIN  CK ++V++ + ++ 
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM    I  + +TY TL+ G  QVG+L  A  L++ M  + V P+  TF + +  LC   
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300

Query: 449 FVLEAVQVFQAIRNCKCELRI 469
            + +A  + + ++  +   RI
Sbjct: 301 ELRKAFAILEDLQKSEVCPRI 321



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 172/318 (54%), Gaps = 4/318 (1%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C+PDVVT+ ++++GLC +G V +A  L+ +M +    P    Y ++I G C + D + A 
Sbjct: 6   CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L  +M +  ++  VV +NA+I+  CKDG       L   M  +G+ PD +TY+ ++D F
Sbjct: 62  NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  GR + A +L   M+ +    DV +++ LINA  K+ KV +A  +Y +ML   I P+ 
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           ITYN+++ G  +   L DA +++D M      PD  TF+T I+G CK   V   +++F  
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +          TY  LI+G C++G L  A  L + +   G  P+ +T  +M+  LC + +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301

Query: 520 MDKANDLLLDMEAKNCVP 537
           + KA  +L D++     P
Sbjct: 302 LRKAFAILEDLQKSEVCP 319



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 173/329 (52%), Gaps = 7/329 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P + +FT L+  L    +    ++L  R+   G  P       +IN LCKMG 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T  A  +L ++  +    + V +N +I+ LC +G  + A  LF +++     P+V+T++ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I+  CR+     A +L  +M+        PDVVT++++I+ L K+G V +A+E+   M 
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQ---INPDVVTFSALINALVKEGKVSEAEEIYGDML 173

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            R I P  ITYNS+I GFC  D   +AK +   M      PDVVTF+ +IN  CK  ++D
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               +   M +RG+  +TVTY +L+ GFC VG +  A++L   M+S G   +  ++  ++
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVI 400
            + C  +++  A  +  ++    + P ++
Sbjct: 294 ASLCSKKELRKAFAILEDLQKSEVCPRIV 322



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 164/321 (51%), Gaps = 4/321 (1%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M +    P+V+T+ +L+ G CC     +A  L   M++ G QP    +  +IN  CK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
            +    LL  M +  +    V YN+++D  C  G    A+ LF  M  KG   DV +Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           +I++ C+  +  DA  L R+M+  +I P V+T++ L++ L + G + +A ++   M    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P + T+ + IDG CK   + +A ++  ++ +  C   + T++ LING CK  R+    
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++F  +  +G + + VT +T+IH  C+ G +D A DLL  M +    P+ +TF ++L   
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 550 VQNNKKSKVVVLLHKMAAEKL 570
               +  K   +L  +   ++
Sbjct: 297 CSKKELRKAFAILEDLQKSEV 317



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 153/305 (50%), Gaps = 4/305 (1%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M++ G +PDVVTF  ++N  C +G++ +   L++ M++ G  P    Y ++++G C +G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
              A  L   M     +  V  YN +I+  CKD     A  L+ EM  + I P VITY+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           ++    + G   DA +L+  M    + PD  TF+  I+ L K G V EA +++  +    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                 TYN +I+G CK  RL  A ++   +  K   PDVVT ST+I+  CK  ++D   
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           ++  +M  +  V + VT+ TL+ GF Q         LL+ M +  +  + ++  S +  L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 585 LSKDK 589
            SK +
Sbjct: 297 CSKKE 301



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 2/170 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + +  +N   K G ++  E +Y    M++    P   ++  ++    K  + +    
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIY--GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKR 202

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   + S    PD+   + LIN  CK         +   + R     NTVT+  LI+G C
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
             G +  A  L   +      PN +TF +++  LC  +    A  + E++
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 58/125 (46%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A    D M     SP + +F+ L+    K K+ D  + +F  ++  G+  +      L
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C++G    A  +L  ++ S   PN +TF  ++  LC++  + +A  + + L     
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEV 317

Query: 183 DPNVV 187
            P +V
Sbjct: 318 CPRIV 322


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 250/485 (51%), Gaps = 12/485 (2%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLF--PDLFVLNLLINCLCKMGITSGAFVVLG 140
           ++ I++  L +    D V  L +++   G+    DLF+   +IN   ++G+   A  +  
Sbjct: 81  TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFIN--VINTYRRVGLAEQALKMFY 138

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
           RI      P    +N L++ + +E R      ++  +     +PNV T+N L+  LC+  
Sbjct: 139 RIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNN 198

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A KL  EM N+    C+PDVV+Y ++I  + K G V++A+EL ++ +     PNV 
Sbjct: 199 RVDGACKLLVEMSNKG---CEPDVVSYTTVISSMSKLGKVEEARELSIRFQ-----PNVS 250

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            YN+LI GFC     KE   L  +M++ G+ P+V+T++ +I+     G ++    +   M
Sbjct: 251 VYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKM 310

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
             RG +P+  T+ SLM G+ + GR+  A  ++  M  +G   +V +YN LI+  C   K+
Sbjct: 311 FVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKM 370

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
            +AV +  +M      P+V TY  L+ G  + G+L  A ++ +KM  N  +P+   + + 
Sbjct: 371 GEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSM 430

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           ++ LC++    +A  + + +    C     T+N  I GLC  GR++ A  LF +++  G 
Sbjct: 431 VNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGC 490

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P++ T + ++  L KE ++ +A +L+ +ME K    + VT+ T+  GF    K  + + 
Sbjct: 491 SPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALK 550

Query: 561 LLHKM 565
           LL KM
Sbjct: 551 LLGKM 555



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 248/510 (48%), Gaps = 9/510 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P +  +  LL  +    ++  +  ++  +  +G  P+++  N+L+  LCK     GA  
Sbjct: 146 QPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACK 205

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +      P+ V++  +I+ +   G++ EA  L  +       PNV  +N LING C
Sbjct: 206 LLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-----QPNVSVYNALINGFC 260

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R         L  +MV +      P+V+TY+++I  L   G V+ A  +  +M  R  +P
Sbjct: 261 REYKVKEVFLLLGQMVEKG---IDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSP 317

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV T+ SL+ G+       EA  ++  M + G +P+VV +N +I+  C  GKM +   + 
Sbjct: 318 NVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVS 377

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + G +P+  TY +L+DGF   G +  A E++  M++ GC  +V  Y  ++N  C+ 
Sbjct: 378 SKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRS 437

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
                A  L  +M ++   P+ +T+NT + GL   G +  A+ L  +M+     P+  T+
Sbjct: 438 SMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTY 497

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              +DGL K   + EA+++   +     EL + TYN +  G C +G+ + A KL  ++  
Sbjct: 498 NEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLV 557

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN-CVPSEVTFCTLLRGFVQNNKKS 556
            G  PD +T +T+ +  C +G++  A  LL  + A    VP    + +LL G        
Sbjct: 558 GGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVE 617

Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           + V+ L KM  E + ++  + ++ V  L +
Sbjct: 618 EAVLYLDKMLNEGICLNAATWNALVRGLFN 647



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 202/430 (46%), Gaps = 16/430 (3%)

Query: 73  IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
           + ++  P ++ +  L+    +  +   V  L  ++   G+ P++   + +I+ L  +G  
Sbjct: 241 LSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNV 300

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
             A  V  ++     +PN  TF  L+ G    GR++EA  ++ ++     +PNVV +NTL
Sbjct: 301 ELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTL 360

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           I+GLC       A+ +  +M       C P+V TY ++IDG  K G +  A E+  +M  
Sbjct: 361 IHGLCSHGKMGEAVSVSSKMERNG---CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMT 417

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
               PNV+ Y S++   C    + +A  L  +M  +   P+ VTFN  I   C  G+++ 
Sbjct: 418 NGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVEC 477

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
              L   M Q G +P+  TYN ++DG     RI  A EL   M  KG   ++ +YN +  
Sbjct: 478 AINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFG 537

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND-VV 431
             C   K E+A+ L  +ML   ++P  ITYNTL       G +  A++L+DK+      V
Sbjct: 538 GFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWV 597

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+   + + + G+C    V EAV     + N    L   T+N L+ G            L
Sbjct: 598 PEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRG------------L 645

Query: 492 FHRLQHKGPI 501
           F+ L H GPI
Sbjct: 646 FNSLGHLGPI 655



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 193/382 (50%), Gaps = 4/382 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           E       M++    P + +++ +++ L+     +  ++++ ++   G  P+++    L+
Sbjct: 267 EVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLM 326

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
                 G    A  +  R+    F PN V +N LI+GLC+ G++ EA  +  K+    C 
Sbjct: 327 KGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCS 386

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNV T+  LI+G  +  + + A +++ +M+      C P+VV Y S+++ LC+     +A
Sbjct: 387 PNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG---CIPNVVVYTSMVNVLCRSSMFSQA 443

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L+ +M   N  PN +T+N+ I G CC    + A  LF +M   G  P++ T+N +++ 
Sbjct: 444 WSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDG 503

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K+ ++ +   L+  M ++G+  + VTYN++  GFC VG+   A +L   M+  G + D
Sbjct: 504 LLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPD 563

Query: 364 VYSYNILINANCKDQKVEDAVCLYREM-LSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
             +YN L  A C   KV+ A+ L  ++    +  P V  Y +LL G+     + +A+  +
Sbjct: 564 AITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYL 623

Query: 423 DKMQLNDVVPDSFTFATYIDGL 444
           DKM    +  ++ T+   + GL
Sbjct: 624 DKMLNEGICLNAATWNALVRGL 645



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 198/436 (45%), Gaps = 66/436 (15%)

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           +TY  +I+ L ++  VD  + LL QMK   I+ +   + ++I  +  V   ++A  +F  
Sbjct: 80  LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           + + G QP V  +N +++    + +   +  +   M + G  P+  TYN L+   C   R
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199

Query: 345 ISRARELFVSMVSKGCRHDVYS------------------------------YNILINAN 374
           +  A +L V M +KGC  DV S                              YN LIN  
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGF 259

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C++ KV++   L  +M+ + I P+VITY+T++S L  +GN+  AL +  KM +    P+ 
Sbjct: 260 CREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNV 319

Query: 435 FTFA-----------------------------------TYIDGLCKNGFVLEAVQVFQA 459
           +TF                                    T I GLC +G + EAV V   
Sbjct: 320 YTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +    C   + TY  LI+G  K G L  A ++++++   G IP+VV  ++M++ LC+   
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSM 439

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
             +A  L+  M   NC P+ VTF T ++G   + +    + L  +M  +     ++   +
Sbjct: 440 FSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQM-EQYGCSPNIKTYN 498

Query: 580 KVVDLLSKDKKYRECL 595
           +V+D L K+ + +E L
Sbjct: 499 EVLDGLLKENRIKEAL 514



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           SK  +H   +Y I+I    ++  V+    L ++M  E I  S   +  +++   +VG   
Sbjct: 72  SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAE 131

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            ALK+  +++     P    +   +D +           ++  ++    E  + TYN L+
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
             LCK  R+  ACKL   + +KG  PDVV+ +T+I  + K G++++A +L +  +     
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ----- 246

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           P+   +  L+ GF +  K  +V +LL +M  EK +  ++   S V+  LS
Sbjct: 247 PNVSVYNALINGFCREYKVKEVFLLLGQM-VEKGIDPNVITYSTVISSLS 295


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 224/430 (52%), Gaps = 7/430 (1%)

Query: 140 GRILRSCF----TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
           GR++R  F     PN  TFN +I+ LC EG + EA  LF ++    C P+VVTFN+LI+G
Sbjct: 173 GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDG 232

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
             +        +L EEM     + CK DVVTYN++I+  CK G ++ A      MK   +
Sbjct: 233 YGKCGELDEVEQLVEEMRR---SGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
             NV+T+++ +  FC     +EA  LF +M   G+  +  T+  +I+  CK G++D    
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           LL+ M+++GV  + VTY  L+DG C   +++ A ++   M   G R +   Y  LI+ + 
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
            ++  E A+ L  EM ++ +   +  Y  L+ GL  V  L +A  L+ KM  + + P+  
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
            + T +D   K+G V EA+ + Q I +   +  + TY  LI+GLCK G +  A   F+++
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +  G  P+V   + ++  LCK G +++A  L  +M  K     +V +  LL G+++    
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 556 SKVVVLLHKM 565
                L  KM
Sbjct: 590 HDAFALKAKM 599



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 237/461 (51%), Gaps = 7/461 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV     + +++  P   +   +L  LA+++    V  LF++L +    P++F  N++
Sbjct: 139 DDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIV 194

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G  + A  +  R+      P+ VTFN LI+G    G + E  +L +++    C
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +VVT+N LIN  C+      A   F  M  E G +   +VVT+++ +D  CK+G V +
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKRE-GVMA--NVVTFSTFVDAFCKEGLVRE 311

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  QM+ R +  N  TY  LI G C      +A  L  EM+  GV  +VVT+  +++
Sbjct: 312 AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+ K+ +   +L +M + GV  + + Y +L+ G  +     +A  L   M +KG   
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLEL 431

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  Y  LI   C   K+++A  L  +M    + P+ I Y T++   F+ G + +A+ ++
Sbjct: 432 DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAML 491

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            K+  +   P+  T+   IDGLCK G + EA+  F  +R+   +  ++ Y  L++GLCK 
Sbjct: 492 QKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           G L  A +LF+ + HKG   D V  + ++    K+G +  A
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 233/476 (48%), Gaps = 5/476 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +   EA   F  M +M   P + +F  L+    K  + D V  L + +  +G   D
Sbjct: 200 KEGELA--EARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKAD 257

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N LINC CK G    A+     + R     N VTF+  ++  C EG + EA +LF 
Sbjct: 258 VVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFA 317

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++ V     N  T+  LI+G C+      A+ L +EMV +   +   +VVTY  ++DGLC
Sbjct: 318 QMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL---NVVTYTVLVDGLC 374

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+  V +A+++L  M+   +  N + Y +LI G     + ++A  L  EM + G++ D+ 
Sbjct: 375 KERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDIS 434

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            + A+I   C   K+D+   LL  M + G+ P+ + Y ++MD     G++  A  +   +
Sbjct: 435 LYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI 494

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +  G + +V +Y  LI+  CK   +++A+  + +M    + P+V  Y  L+ GL + G L
Sbjct: 495 LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCL 554

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A++L ++M    +  D   +   +DG  K G + +A  +   + +   +L +  Y C 
Sbjct: 555 NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCF 614

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           I+G C +  +  A ++F  +   G  PD    + +I    K G +++A  L  +ME
Sbjct: 615 ISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 232/495 (46%), Gaps = 15/495 (3%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P+P + +F I++  L K  +     SLF R+   G  PD+   N LI+   K G      
Sbjct: 184 PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            ++  + RS    + VT+N LIN  C  GR+  A   F  +       NVVTF+T ++  
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 197 CRTRNTLVALKLFEEM------VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           C+      A+KLF +M      +NEF         TY  +IDG CK G +D A  LL +M
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEF---------TYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
             + +  NV+TY  L+ G C      EA+ +   M   GV+ + + +  +I+ +  +   
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           +K   LL  M  +G+  D   Y +L+ G C V ++  A+ L   M   G   +   Y  +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           ++A  K  KV +A+ + +++L    +P+VITY  L+ GL + G++ +A+   +KM+   +
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            P+   +   +DGLCKNG + EAVQ+F  + +    L    Y  L++G  K G L  A  
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L  ++   G   D+   +  I   C    M +A ++  +M      P    +  L+  + 
Sbjct: 595 LKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQ 654

Query: 551 QNNKKSKVVVLLHKM 565
           +     + + L  +M
Sbjct: 655 KLGNLEEAISLQDEM 669



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 211/409 (51%), Gaps = 7/409 (1%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           L++ L   G + +A R   ++      PN  T N ++  L R R+  +  +LFE++    
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP--- 184

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
                P+V T+N +ID LCK+G + +A+ L  +MK+    P+V+T+NSLI G+    +  
Sbjct: 185 ----APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           E + L  EM  +G + DVVT+NA+IN  CK G+M+        M + GV  + VT+++ +
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFV 300

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           D FC  G +  A +LF  M  +G   + ++Y  LI+  CK  +++DA+ L  EM+ + + 
Sbjct: 301 DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
            +V+TY  L+ GL +   + +A  ++  M+   V  +   + T I G   N    +A+ +
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              ++N   EL I  Y  LI GLC + +L  A  L  ++   G  P+ +  +TM+    K
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK 480

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            G++ +A  +L  +      P+ +T+C L+ G  +     + +   +KM
Sbjct: 481 SGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 2/171 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G+I  +EA+  F+ M  +   P + ++T L+  L KN   +  V LF  +   G+  D
Sbjct: 515 KAGSI--DEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLD 572

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             V   L++   K G    AF +  +++ S    +   +   I+G C    + EA  +F 
Sbjct: 573 KVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFS 632

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           ++      P+   +N LI+   +  N   A+ L +EM     +    D  T
Sbjct: 633 EMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDTAT 683


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 253/488 (51%), Gaps = 4/488 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M+     P + ++++L+    K +  +TV+ L + + ++G+ P+++   + I
Sbjct: 213 EALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICI 272

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L +      A+ +L ++      P+ +T   LI  LC  GRI +A  +F K+      
Sbjct: 273 RVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQK 332

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++      ++   ++++  M  +       +VV Y ++ID LC+ G V +A
Sbjct: 333 PDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG---YNDNVVAYTAVIDALCQVGRVFEA 389

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E+  +MK + I P   +YNSLI GF   D + +A  LF  M  +G +P+  T    INY
Sbjct: 390 LEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINY 449

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G+  K  +  ELM  +G+ PD V  N+++ G    GR+  A+ +F  + + G   D
Sbjct: 450 YGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPD 509

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y ++I    K  K ++AV ++ +M+     P V+  N+L+  L++ G   +A ++  
Sbjct: 510 TITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFY 569

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +++  ++ P   T+ T + GL + G V E + + + + +      + TYN +++ LCK G
Sbjct: 570 QLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNG 629

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A  + + +  KG IPD+ + +T+I+ L KE + ++A  +   M+ K  +P   T C
Sbjct: 630 AVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLC 688

Query: 544 TLLRGFVQ 551
           T+L  FV+
Sbjct: 689 TILPSFVK 696



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 248/530 (46%), Gaps = 4/530 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD M +      + +F  +   L       +       +   G+  + +  N L+  L K
Sbjct: 148 FDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVK 207

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A  V   ++     P+  T++ L+        +     L +++      PNV +
Sbjct: 208 SGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYS 267

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +   I  L + +    A ++  +M NE    CKPDV+T+  +I  LC  G +  AK++  
Sbjct: 268 YTICIRVLGQAKRFDEAYRILAKMENEG---CKPDVITHTVLIQVLCDAGRISDAKDVFW 324

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK  +  P+ +TY +L+  F    D +    ++  M  +G   +VV + A+I+  C+ G
Sbjct: 325 KMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVG 384

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ +   + + M Q+G+ P+  +YNSL+ GF    R   A ELF  M   G + + Y++ 
Sbjct: 385 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 444

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           + IN   K  +   A+  Y  M S+ I P V+  N +L GL + G LG A ++  +++  
Sbjct: 445 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 504

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V PD+ T+   I    K     EAV++F  +    C   +   N LI+ L K GR   A
Sbjct: 505 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 564

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            ++F++L+     P   T +T++  L +EG++ +   LL +M   N  P+ +T+ T+L  
Sbjct: 565 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 624

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             +N   +  + +L+ M   K  + DLS  + V+  L K+++Y E  + F
Sbjct: 625 LCKNGAVNDALDMLYSMTT-KGCIPDLSSYNTVIYGLVKEERYNEAFSIF 673



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 244/529 (46%), Gaps = 7/529 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           +G +   F+N   KSG   S +A+  ++ M      P + +   +L  LAK+ +      
Sbjct: 439 NGYTHVLFINYYGKSGE--SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 496

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  L + G+ PD     ++I C  K      A  +   ++ +   P+ +  N LI+ L 
Sbjct: 497 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 556

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GR  EA R+F +L     +P   T+NTL+ GL R       + L EEM   + +   P
Sbjct: 557 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM---YHSNYPP 613

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +++TYN+I+D LCK+G V+ A ++L  M  +   P++ +YN++I G    + + EA  +F
Sbjct: 614 NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 673

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL-ELMIQRGVNPDTVTYNSLMDGFCL 341
            +M    + PD  T   ++    K G M +   ++ +  +Q G   D  + +SLM+G   
Sbjct: 674 CQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 732

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
              I ++ E    + S G   D +    LI   CK +K  +A  L ++  S  +      
Sbjct: 733 KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 792

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN+L+ GL     +  A  L  +M+     PD FT+   +D + K+  + E ++V + + 
Sbjct: 793 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 852

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               E    TYN +I+GL K  RL+ A  L++ L  +G  P   T   ++  L K G+++
Sbjct: 853 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 912

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
            A +L  +M    C  +   +  LL G        KV  L   M  + +
Sbjct: 913 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGI 961



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 141/609 (23%), Positives = 269/609 (44%), Gaps = 83/609 (13%)

Query: 70  DCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           D   KMK S   P   ++  LL     N    +V+ ++  + ++G   ++     +I+ L
Sbjct: 321 DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDAL 380

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           C++G    A  +   + +    P   ++N LI+G     R  +A  LFK +++    PN 
Sbjct: 381 CQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNG 440

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
            T    IN   ++  ++ A++ +E M ++ G +  PDVV  N+++ GL K G +  AK +
Sbjct: 441 YTHVLFINYYGKSGESIKAIQRYELMKSK-GIV--PDVVAGNAVLFGLAKSGRLGMAKRV 497

Query: 247 LLQMKDRNINPNVITYNSLICGFCC--VDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN-- 302
             ++K   ++P+ ITY  +I   CC     + EA  +F +M++N   PDV+  N++I+  
Sbjct: 498 FHELKAMGVSPDTITYTMMIK--CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 555

Query: 303 ---------------------------YNC------KDGKMDKVNRLLELMIQRGVNPDT 329
                                      YN       ++GK+ +V  LLE M      P+ 
Sbjct: 556 YKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNL 615

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TYN+++D  C  G ++ A ++  SM +KGC  D+ SYN +I    K+++  +A  ++ +
Sbjct: 616 ITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 675

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLID-------------------------- 423
           M    I P   T  T+L    ++G + +AL +I                           
Sbjct: 676 MKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKA 734

Query: 424 ----KMQLNDVVP------DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
                ++  +++       D F     I  LCK    LEA ++ +  ++    L+   YN
Sbjct: 735 GIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYN 794

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI GL     +  A  LF  ++  G  PD  T + ++  + K  ++++   +  +M  K
Sbjct: 795 SLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRK 854

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
               + VT+ T++ G V++ +  + + L + + ++    +  +    ++D L K  +  +
Sbjct: 855 GYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP-LLDGLLKAGRIED 913

Query: 594 CLNQFRHLL 602
             N F  +L
Sbjct: 914 AENLFNEML 922



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 226/490 (46%), Gaps = 45/490 (9%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT---RNTLVAL 206
            T + N+++  +   GR+ + A +F  +       NV TF  +  GL      R+  VAL
Sbjct: 124 TTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL 183

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            + +E     G +   +  TYN ++  L K GF  +A E+   M    + P+V TY+ L+
Sbjct: 184 PVMKEA----GIVL--NAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 237

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
             F    D +    L  EM  +GV+P+V ++   I    +  + D+  R+L  M   G  
Sbjct: 238 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK 297

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFV--------------------------------- 353
           PD +T+  L+   C  GRIS A+++F                                  
Sbjct: 298 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI 357

Query: 354 --SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
             +M + G   +V +Y  +I+A C+  +V +A+ ++ EM  + I P   +YN+L+SG  +
Sbjct: 358 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 417

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
               GDAL+L   M ++   P+ +T   +I+   K+G  ++A+Q ++ +++      +  
Sbjct: 418 ADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVA 477

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
            N ++ GL K GRL  A ++FH L+  G  PD +T + MI    K  + D+A  +  DM 
Sbjct: 478 GNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMI 537

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
             NCVP  +   +L+    +  +  +   + +++    L  +D + ++ +   L ++ K 
Sbjct: 538 ENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAG-LGREGKV 596

Query: 592 RECLNQFRHL 601
           +E ++    +
Sbjct: 597 KEVMHLLEEM 606



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 225/492 (45%), Gaps = 42/492 (8%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +   + V  F  +  M  SP   ++T+++   +K  ++D  V +F  +  N   PD
Sbjct: 487 KSGRLGMAKRV--FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 544

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +  +N LI+ L K G    A+ +  ++      P   T+N L+ GL  EG++ E   L +
Sbjct: 545 VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 604

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PN++T+NT+++ LC+      AL +   M  +    C PD+ +YN++I GL 
Sbjct: 605 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG---CIPDLSSYNTVIYGLV 661

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA----KCLFIE------- 284
           K+   ++A  +  QMK + + P+  T  +++  F  +   KEA    K  F++       
Sbjct: 662 KEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDR 720

Query: 285 -------------------------MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
                                    +  +G+  D      +I + CK  K  + + L++ 
Sbjct: 721 SSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKK 780

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
               GV+  T  YNSL+ G      I  A  LF  M   GC  D ++YN+L++A  K  +
Sbjct: 781 FKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMR 840

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +E+ + +  EM  +    + +TYNT++SGL +   L  A+ L   +      P   T+  
Sbjct: 841 IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP 900

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +DGL K G + +A  +F  +    C+     YN L+NG    G  +  C LF  +  +G
Sbjct: 901 LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 960

Query: 500 PIPDVVTCSTMI 511
             PD+ + + +I
Sbjct: 961 INPDIKSYTIII 972



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 194/435 (44%), Gaps = 40/435 (9%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  ++   ++  +K+G    +EA   F  + +M   P   ++  LL  L +  +   V+ 
Sbjct: 544 DVLAVNSLIDTLYKAGR--GDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 601

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L + +  +   P+L   N +++CLCK G  + A  +L  +      P+  ++N +I GL 
Sbjct: 602 LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 661

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            E R  EA  +F ++      P+  T  T++    +      AL + ++   + G+  K 
Sbjct: 662 KEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGS--KT 718

Query: 223 DVVTYNSIIDGLCKDGFVDK-----------------------------------AKELL 247
           D  + +S+++G+ K   ++K                                   A EL+
Sbjct: 719 DRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 778

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            + K   ++     YNSLICG    +    A+ LF EM + G  PD  T+N +++   K 
Sbjct: 779 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 838

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            +++++ ++ E M ++G     VTYN+++ G     R+ +A +L+ +++S+G      +Y
Sbjct: 839 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 898

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             L++   K  ++EDA  L+ EML    + +   YN LL+G    GN      L   M  
Sbjct: 899 GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 958

Query: 428 NDVVPDSFTFATYID 442
             + PD  ++   ID
Sbjct: 959 QGINPDIKSYTIIID 973



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 141/315 (44%), Gaps = 5/315 (1%)

Query: 291 QPDVVTFNAMINYNCK----DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           +P V    A  NY  +     G++  +  + ++M ++ V  +  T+ ++  G  + G + 
Sbjct: 118 KPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 177

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A      M   G   + Y+YN L+    K     +A+ +YR M+ + + PSV TY+ L+
Sbjct: 178 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 237

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
               +  ++   L L+ +M+ + V P+ +++   I  L +     EA ++   + N  C+
Sbjct: 238 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK 297

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + T+  LI  LC  GR+  A  +F +++     PD VT  T++      G      ++
Sbjct: 298 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI 357

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
              M+A     + V +  ++    Q  +  + + +  +M  + +V    S +S +   L 
Sbjct: 358 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 417

Query: 587 KDKKYRECLNQFRHL 601
            D ++ + L  F+H+
Sbjct: 418 AD-RFGDALELFKHM 431


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 236/475 (49%), Gaps = 6/475 (1%)

Query: 101  VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
            +S F+ + S+G+ PD+   N ++  L           V   +L     P+ VT+N L++ 
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 161  LCAEGRIMEAARLFKKLNV--FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
               EGR  + A L K++      C PN VT+N +I GL R  +   A +L E M      
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM----RL 1184

Query: 219  ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
              K    TYN +I GL   G V K  +L L+M++  I P V+TYN++I G       + A
Sbjct: 1185 SKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAA 1244

Query: 279  KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
            +  F EM   G+ PDV+T+N+++N  CK G + +   L   + + G+ P  +TYN L+DG
Sbjct: 1245 QVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDG 1304

Query: 339  FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
            +C +G +  AR L   M  +GC  +V +Y IL+  +   + +  A   + EMLS+ ++P 
Sbjct: 1305 YCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPD 1364

Query: 399  VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
               YNT +     +G++  A +L + + L  +  D+ T+   I GLCK G + +A ++  
Sbjct: 1365 CFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQM 1424

Query: 459  AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
             + +   +    TY CLI+  C+ G L+ A K+F+ +   G +P  VT + +IH  C+ G
Sbjct: 1425 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRG 1484

Query: 519  QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
             +  A      M  +   P+E+T+  L+    +  +        H+M    LV +
Sbjct: 1485 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 1539



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 258/522 (49%), Gaps = 17/522 (3%)

Query: 35   DLSSH----HFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTM 90
            +++SH      KD   + + L D  +  +I +       + M+++   P + ++  LL  
Sbjct: 1074 EMASHGVAPDVKDCNRVLRVLRDAARWDDICA-----VHEEMLELGIEPSIVTYNTLLDS 1128

Query: 91   LAKNKQYDTVVSLFKRLNS--NGLFPDLFVLNLLINCLCKMG-ITSGAFVVLGRILRSCF 147
              K  + D V  L K + +  +G  P+    N++I  L + G +   A +V G  +R   
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG--MRLSK 1186

Query: 148  TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
              ++ T+N LI GL A G + +   L  ++      P VVT+N +I+GL ++     A  
Sbjct: 1187 KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 1246

Query: 208  LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
             F EM    G +  PDV+TYNS+++G CK G + +A  L   ++   + P V+TYN LI 
Sbjct: 1247 KFAEM-RAMGLL--PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILID 1303

Query: 268  GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            G+C + D +EA+ L  EM + G  P+V T+  ++  +     +       + M+ +G+ P
Sbjct: 1304 GYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQP 1363

Query: 328  DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
            D   YN+ +    ++G I+RA EL   ++ +G   D  +YNILI+  CK   ++DA  L 
Sbjct: 1364 DCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQ 1423

Query: 388  REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             +M+S  ++P  ITY  L+    + G L +A K+ + M  + ++P + TF   I   C+ 
Sbjct: 1424 MKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRR 1483

Query: 448  GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
            G +  A   F+ +     E    TYN LI+ LC+MGR + A   FH +  +G + +  T 
Sbjct: 1484 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTY 1543

Query: 508  STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            + +I   CK G  + A     +M      P  +T   LL+GF
Sbjct: 1544 TLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 203/403 (50%), Gaps = 14/403 (3%)

Query: 180  FACDPNVVTFNTLINGLCRT-RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +P++VT+NTL++   +  R   VA+ L +EM    G+ C P+ VTYN +I GL + G
Sbjct: 1113 LGIEPSIVTYNTLLDSFLKEGRKDKVAM-LLKEMETR-GSGCLPNDVTYNVVITGLTRKG 1170

Query: 239  FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
             +++A EL+  M+  +   +  TYN LI G       K+   L +EM + G+ P VVT+N
Sbjct: 1171 DLEEAAELVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 1229

Query: 299  AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            AMI+   + G ++        M   G+ PD +TYNSL++G+C  G +  A  LF  +   
Sbjct: 1230 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 1289

Query: 359  GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
            G    V +YNILI+  C+   +E+A  L  EM  +   P+V TY  L+ G   V +L  A
Sbjct: 1290 GLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMA 1349

Query: 419  LKLIDKMQLNDVVPDSFTF-----ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
             +  D+M    + PD F +     A  I G     F L  V + + I +        TYN
Sbjct: 1350 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTV-----TYN 1404

Query: 474  CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
             LI+GLCK G LK A +L  ++   G  PD +T + +IH  C+ G + +A  +  +M + 
Sbjct: 1405 ILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 1464

Query: 534  NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
              +PS VTF  ++  + +            KM  E +  ++++
Sbjct: 1465 GLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 1507



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 192/407 (47%), Gaps = 6/407 (1%)

Query: 174  FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            F+++      P+V   N ++  L           + EEM+ E G   +P +VTYN+++D 
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEML-ELG--IEPSIVTYNTLLDS 1128

Query: 234  LCKDGFVDKAKELLLQMKDRNIN--PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
              K+G  DK   LL +M+ R     PN +TYN +I G     D +EA  L +E M    +
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAEL-VEGMRLSKK 1187

Query: 292  PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
                T+N +I      G + KV  L   M   G+ P  VTYN+++ G    G +  A+  
Sbjct: 1188 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 352  FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
            F  M + G   DV +YN L+N  CK   +++A+ L+ ++    + P+V+TYN L+ G  +
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307

Query: 412  VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            +G+L +A  L ++M     +P+  T+   + G      +  A + F  + +   +     
Sbjct: 1308 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFA 1367

Query: 472  YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
            YN  I     +G +  A +L   L  +G   D VT + +IH LCK G +  A +L + M 
Sbjct: 1368 YNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV 1427

Query: 532  AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +    P  +T+  L+    +     +   + + M ++ L+ S ++ +
Sbjct: 1428 SNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFT 1474



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 38/230 (16%)

Query: 352  FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
            F  M S G   DV   N ++       + +D   ++ EML   I PS++TYNTLL    +
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 412  VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
             G       L+ +M+                                  R   C     T
Sbjct: 1132 EGRKDKVAMLLKEME---------------------------------TRGSGCLPNDVT 1158

Query: 472  YNCLINGLCKMGRLKTACKLFH--RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            YN +I GL + G L+ A +L    RL  K       T + +I  L   G + K  DL L+
Sbjct: 1159 YNVVITGLTRKGDLEEAAELVEGMRLSKKA---SSFTYNPLITGLLARGCVKKVYDLQLE 1215

Query: 530  MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            ME +  +P+ VT+  ++ G +Q+       V   +M A  L+   ++ +S
Sbjct: 1216 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNS 1265


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 224/430 (52%), Gaps = 7/430 (1%)

Query: 140 GRILRSCF----TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
           GR++R  F     PN  TFN +I+ LC EG + EA  LF ++    C P+VVTFN+LI+G
Sbjct: 173 GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDG 232

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
             +        +L EEM     + CK DVVTYN++I+  CK G ++ A      MK   +
Sbjct: 233 YGKCGELDEVEQLVEEMRR---SGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
             NV+T+++ +  FC     +EA  LF +M   G+  +  T+  +I+  CK G++D    
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           LL+ M+++GV  + VTY  L+DG C   +++ A ++   M   G R +   Y  LI+ + 
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
            ++  E A+ L  EM ++ +   +  Y  L+ GL  V  L +A  L+ KM  + + P+  
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
            + T +D   K+G V EA+ + Q I +   +  + TY  LI+GLCK G +  A   F+++
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +  G  P+V   + ++  LCK G +++A  L  +M  K     +V +  LL G+++    
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 556 SKVVVLLHKM 565
                L  KM
Sbjct: 590 HDAFALKAKM 599



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 237/461 (51%), Gaps = 7/461 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV     + +++  P   +   +L  LA+++    V  LF++L +    P++F  N++
Sbjct: 139 DDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIV 194

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK G  + A  +  R+      P+ VTFN LI+G    G + E  +L +++    C
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +VVT+N LIN  C+      A   F  M  E G +   +VVT+++ +D  CK+G V +
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKRE-GVMA--NVVTFSTFVDAFCKEGLVRE 311

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  QM+ R +  N  TY  LI G C      +A  L  EM+  GV  +VVT+  +++
Sbjct: 312 AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+ K+ +   +L +M + GV  + + Y +L+ G  +     +A  L   M +KG   
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLEL 431

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  Y  LI   C   K+++A  L  +M    + P+ I Y T++   F+ G + +A+ ++
Sbjct: 432 DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAML 491

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            K+  +   P+  T+   IDGLCK G + EA+  F  +R+   +  ++ Y  L++GLCK 
Sbjct: 492 QKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           G L  A +LF+ + HKG   D V  + ++    K+G +  A
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 233/476 (48%), Gaps = 5/476 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +   EA   F  M +M   P + +F  L+    K  + D V  L + +  +G   D
Sbjct: 200 KEGELA--EARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKAD 257

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N LINC CK G    A+     + R     N VTF+  ++  C EG + EA +LF 
Sbjct: 258 VVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFA 317

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++ V     N  T+  LI+G C+      A+ L +EMV +   +   +VVTY  ++DGLC
Sbjct: 318 QMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL---NVVTYTVLVDGLC 374

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+  V +A+++L  M+   +  N + Y +LI G     + ++A  L  EM + G++ D+ 
Sbjct: 375 KERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDIS 434

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            + A+I   C   K+D+   LL  M + G+ P+ + Y ++MD     G++  A  +   +
Sbjct: 435 LYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI 494

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +  G + +V +Y  LI+  CK   +++A+  + +M    + P+V  Y  L+ GL + G L
Sbjct: 495 LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCL 554

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A++L ++M    +  D   +   +DG  K G + +A  +   + +   +L +  Y C 
Sbjct: 555 NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCF 614

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           I+G C +  +  A ++F  +   G  PD    + +I    K G +++A  L  +ME
Sbjct: 615 ISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 232/495 (46%), Gaps = 15/495 (3%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P+P + +F I++  L K  +     SLF R+   G  PD+   N LI+   K G      
Sbjct: 184 PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            ++  + RS    + VT+N LIN  C  GR+  A   F  +       NVVTF+T ++  
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 197 CRTRNTLVALKLFEEM------VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           C+      A+KLF +M      +NEF         TY  +IDG CK G +D A  LL +M
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEF---------TYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
             + +  NV+TY  L+ G C      EA+ +   M   GV+ + + +  +I+ +  +   
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           +K   LL  M  +G+  D   Y +L+ G C V ++  A+ L   M   G   +   Y  +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           ++A  K  KV +A+ + +++L    +P+VITY  L+ GL + G++ +A+   +KM+   +
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
            P+   +   +DGLCKNG + EAVQ+F  + +    L    Y  L++G  K G L  A  
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L  ++   G   D+   +  I   C    M +A ++  +M      P    +  L+  + 
Sbjct: 595 LKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQ 654

Query: 551 QNNKKSKVVVLLHKM 565
           +     + + L  +M
Sbjct: 655 KLGNLEEAISLQDEM 669



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 211/409 (51%), Gaps = 7/409 (1%)

Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
           L++ L   G + +A R   ++      PN  T N ++  L R R+  +  +LFE++    
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP--- 184

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
                P+V T+N +ID LCK+G + +A+ L  +MK+    P+V+T+NSLI G+    +  
Sbjct: 185 ----APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           E + L  EM  +G + DVVT+NA+IN  CK G+M+        M + GV  + VT+++ +
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFV 300

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           D FC  G +  A +LF  M  +G   + ++Y  LI+  CK  +++DA+ L  EM+ + + 
Sbjct: 301 DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
            +V+TY  L+ GL +   + +A  ++  M+   V  +   + T I G   N    +A+ +
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              ++N   EL I  Y  LI GLC + +L  A  L  ++   G  P+ +  +TM+    K
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK 480

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            G++ +A  +L  +      P+ +T+C L+ G  +     + +   +KM
Sbjct: 481 SGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 2/171 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G+I  +EA+  F+ M  +   P + ++T L+  L KN   +  V LF  +   G+  D
Sbjct: 515 KAGSI--DEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLD 572

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             V   L++   K G    AF +  +++ S    +   +   I+G C    + EA  +F 
Sbjct: 573 KVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFS 632

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           ++      P+   +N LI+   +  N   A+ L +EM     +    D  T
Sbjct: 633 EMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDTAT 683


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 250/517 (48%), Gaps = 26/517 (5%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           L      PD    N +++ LC+  +   A  +L R+      PN VT+  L++G   +G+
Sbjct: 263 LEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQ 322

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           +    R+   +    C PN   FN+L++  C++R+   A KLF++M+      C+P  + 
Sbjct: 323 LGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIK---CGCQPGYLL 379

Query: 227 YNSIIDGLCKD------GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           YN  I  +C +        ++ A++   +M D  +  N +  ++     C    + +A  
Sbjct: 380 YNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFE 439

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +  EMM  G  PD  T++ +I + C   K++K   L E M + G+ P   TY  L+D FC
Sbjct: 440 IICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFC 499

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G I +AR  F  M+   C  +V +Y  LI+A  K +KV DA  L+  ML E  +P+V+
Sbjct: 500 KAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVV 559

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQ-------------LND---VVPDSFTFATYIDGL 444
           TY  L+ G  + G +  A ++  +MQ             L+D     P+  T+   +DGL
Sbjct: 560 TYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGL 619

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           CK   V EA ++   +    CE     Y+ LI+G CK G+L+ A ++F ++  +G  P++
Sbjct: 620 CKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNL 679

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
            T S++I+ L KE ++D    +L  M   +C P+ V +  ++ G  +  K  +   L+ K
Sbjct: 680 YTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLK 739

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           M  E     ++   + ++D   K  K  +CL  +R +
Sbjct: 740 M-EEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDM 775



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 247/498 (49%), Gaps = 17/498 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  ++++ ++  L    + +    LF+ +  NG+ P ++   +LI+  CK G+   A   
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +LR   TPN VT+  LI+      ++ +A +LF+ + +    PNVVT+  LI+G C+
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCK 570

Query: 199 TRNTLVALKLFEEMVNEFGAI------------CK-PDVVTYNSIIDGLCKDGFVDKAKE 245
                 A +++  M  +  +             C+ P+++TY +++DGLCK   V++A E
Sbjct: 571 AGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHE 630

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           LL  M      PN I Y++LI GFC     + A+ +F++M + G  P++ T++++IN   
Sbjct: 631 LLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLF 690

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           K+ ++D V ++L  M++    P+ V Y  ++DG C VG+   A  L + M   GC  +V 
Sbjct: 691 KEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVI 750

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y  +I+   K  K+E  + LYR+M S+   P+ ITY  L++     G L +A +L+D+M
Sbjct: 751 TYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEM 810

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +         ++   I+G   N   + ++ +   +   +       Y  LI+   K GRL
Sbjct: 811 KQTYWPRHISSYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRL 868

Query: 486 KTACKLFHRLQHKG--PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           + A  L   +       + +    +++I  L    ++DKA +L   M  KN VP   TF 
Sbjct: 869 EGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFV 928

Query: 544 TLLRGFVQNNKKSKVVVL 561
            L++G  +  K  + + L
Sbjct: 929 HLIKGLTRVGKWQEALQL 946



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 238/529 (44%), Gaps = 59/529 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN-CLCKMGITSGAFV 137
           P    +  +++ L +   +   + +  R+ S    P++    +L++ CL K  +     +
Sbjct: 270 PDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRI 329

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   +   C+ PN   FN L++  C       A +LFKK+    C P  + +N  I  +C
Sbjct: 330 LSMMMTEGCY-PNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSIC 388

Query: 198 RTRNTL------VALKLFEEMVN-------------------------EFGAICK----- 221
                       +A K + EM++                          F  IC+     
Sbjct: 389 SNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKG 448

Query: 222 --PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             PD  TY+ +I  LC    V+KA  L  +MK   I P+V TY  LI  FC     ++A+
Sbjct: 449 FVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQAR 508

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
             F EM+ +   P+VVT+ ++I+   K  K+   N+L E+M+  G  P+ VTY +L+DG 
Sbjct: 509 NWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGH 568

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  G+I +A +++  M       D+  Y  L + +C+                    P++
Sbjct: 569 CKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCET-------------------PNI 609

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           ITY  L+ GL +   + +A +L+D M +N   P+   +   IDG CK G +  A +VF  
Sbjct: 610 ITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVK 669

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +        + TY+ LIN L K  RL    K+  ++      P+VV  + MI  LCK G+
Sbjct: 670 MSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGK 729

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            ++A  L+L ME   C P+ +T+  ++ GF +  K  + + L   M ++
Sbjct: 730 TEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSK 778



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 236/531 (44%), Gaps = 66/531 (12%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN------------------ 159
           +LN LI   C+ G+ + A   LGR+    +  +  T+N LI                   
Sbjct: 172 LLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREM 231

Query: 160 -----------------GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                             LC  GR  +A  L +K       P+ V +N +++GLC     
Sbjct: 232 SNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFV---PDTVFYNRMVSGLCEASLF 288

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A+ + + M +     C P+VVTY  ++ G    G + + K +L  M      PN   +
Sbjct: 289 QEAMDILDRMRS---ISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMF 345

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL--- 319
           NSL+  +C   D+  A  LF +M+  G QP  + +N  I   C + ++   + LLEL   
Sbjct: 346 NSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSD-LLELAEK 404

Query: 320 ----MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
               M+  GV  + V  ++     C  G+  +A E+   M+SKG   D  +Y+ +I   C
Sbjct: 405 AYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLC 464

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
              KVE A  L+ EM    I PSV TY  L+    + G +  A    D+M  ++  P+  
Sbjct: 465 DASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVV 524

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+ + I    K   V +A ++F+ +     +  + TY  LI+G CK G++  AC+++ R+
Sbjct: 525 TYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM 584

Query: 496 Q----------------HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           Q                +    P+++T   ++  LCK  ++++A++LL  M    C P++
Sbjct: 585 QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQ 644

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           + +  L+ GF +  K      +  KM +E+    +L   S +++ L K+K+
Sbjct: 645 IVYDALIDGFCKTGKLENAQEVFVKM-SERGYCPNLYTYSSLINSLFKEKR 694



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 195/426 (45%), Gaps = 14/426 (3%)

Query: 58   GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
            G+I S++   +F        +P + ++  L+  L K  + +    L   ++ NG  P+  
Sbjct: 586  GDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQI 645

Query: 118  VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
            V + LI+  CK G    A  V  ++    + PN  T++ LIN L  E R+    ++  K+
Sbjct: 646  VYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKM 705

Query: 178  NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
               +C PNVV +  +I+GLC+   T  A +L  +M  E G  C P+V+TY ++IDG  K 
Sbjct: 706  LENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKM-EEVG--CYPNVITYTAMIDGFGKI 762

Query: 238  GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
            G +++  EL   M  +   PN ITY  LI   C      EA  L  EM        + ++
Sbjct: 763  GKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSY 822

Query: 298  NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
              +I    ++  +  +  L EL     V P    Y  L+D F   GR+  A  L   + S
Sbjct: 823  RKIIEGFNREF-ITSIGLLDELSENESV-PVESLYRILIDNFIKAGRLEGALNLLEEISS 880

Query: 358  KG--CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
                   + Y Y  LI +     KV+ A  LY  M+++ + P + T+  L+ GL +VG  
Sbjct: 881  SPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKW 940

Query: 416  GDALKLIDKM-QLNDVVPDSFT--FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
             +AL+L D + Q+   V  +F     T    LC   F++        ++  +CEL  +  
Sbjct: 941  QEALQLSDSICQMVCHVCSNFVNYKTTRALPLCIKHFLIST----GFMKRYQCELVSDAQ 996

Query: 473  NCLING 478
            NC +NG
Sbjct: 997  NCRLNG 1002



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 120/538 (22%), Positives = 207/538 (38%), Gaps = 90/538 (16%)

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV-----------F 180
           TS   + +   +R+ F   T  F     G  +E  ++E   L K                
Sbjct: 68  TSNDALSISNAIRTGFGAETQNFLRQFRGRLSEPLVVEVMNLVKHPEFCVEFFLWASRQI 127

Query: 181 ACDPNVVTFNTLINGLC--RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
                 V +N LI  LC     N  V+ K   ++ ++   + +      N +I   C++G
Sbjct: 128 GYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRK---LLNFLIQKCCRNG 184

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ------- 291
             + A E L ++KD     +  TYN+LI  F   D    A  +  EM ++G +       
Sbjct: 185 MWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLG 244

Query: 292 -------------------------PDVVTFNAMINYNCK-------------------- 306
                                    PD V +N M++  C+                    
Sbjct: 245 CFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCI 304

Query: 307 ---------------DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
                           G++ +  R+L +M+  G  P+   +NSL+  +C     S A +L
Sbjct: 305 PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKL 364

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQK------VEDAVCLYREMLSERIRPSVITYNTL 405
           F  M+  GC+     YNI I + C +++      +E A   Y EML   +  + +  +  
Sbjct: 365 FKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNF 424

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
              L   G    A ++I +M     VPD  T++  I  LC    V +A  +F+ ++    
Sbjct: 425 ARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGI 484

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
              + TY  LI+  CK G ++ A   F  +      P+VVT +++IH   K  ++  AN 
Sbjct: 485 VPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANK 544

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
           L   M  +   P+ VT+  L+ G  +  +  K   +  +M  + +  SD+ +  K+ D
Sbjct: 545 LFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGD-IESSDIDMYFKLDD 601


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 253/488 (51%), Gaps = 4/488 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M+     P + ++++L+    K +  +TV+ L + + ++G+ P+++   + I
Sbjct: 303 EALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICI 362

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L +      A+ +L ++      P+ +T   LI  LC  GRI +A  +F K+      
Sbjct: 363 RVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQK 422

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++      ++   ++++  M  +       +VV Y ++ID LC+ G V +A
Sbjct: 423 PDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG---YNDNVVAYTAVIDALCQVGRVFEA 479

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E+  +MK + I P   +YNSLI GF   D + +A  LF  M  +G +P+  T    INY
Sbjct: 480 LEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINY 539

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G+  K  +  ELM  +G+ PD V  N+++ G    GR+  A+ +F  + + G   D
Sbjct: 540 YGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPD 599

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y ++I    K  K ++AV ++ +M+     P V+  N+L+  L++ G   +A ++  
Sbjct: 600 TITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFY 659

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +++  ++ P   T+ T + GL + G V E + + + + +      + TYN +++ LCK G
Sbjct: 660 QLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNG 719

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A  + + +  KG IPD+ + +T+I+ L KE + ++A  +   M+ K  +P   T C
Sbjct: 720 AVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLC 778

Query: 544 TLLRGFVQ 551
           T+L  FV+
Sbjct: 779 TILPSFVK 786



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 248/530 (46%), Gaps = 4/530 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD M +      + +F  +   L       +       +   G+  + +  N L+  L K
Sbjct: 238 FDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVK 297

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A  V   ++     P+  T++ L+        +     L +++      PNV +
Sbjct: 298 SGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYS 357

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +   I  L + +    A ++  +M NE    CKPDV+T+  +I  LC  G +  AK++  
Sbjct: 358 YTICIRVLGQAKRFDEAYRILAKMENEG---CKPDVITHTVLIQVLCDAGRISDAKDVFW 414

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK  +  P+ +TY +L+  F    D +    ++  M  +G   +VV + A+I+  C+ G
Sbjct: 415 KMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVG 474

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ +   + + M Q+G+ P+  +YNSL+ GF    R   A ELF  M   G + + Y++ 
Sbjct: 475 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 534

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           + IN   K  +   A+  Y  M S+ I P V+  N +L GL + G LG A ++  +++  
Sbjct: 535 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 594

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V PD+ T+   I    K     EAV++F  +    C   +   N LI+ L K GR   A
Sbjct: 595 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 654

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            ++F++L+     P   T +T++  L +EG++ +   LL +M   N  P+ +T+ T+L  
Sbjct: 655 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 714

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             +N   +  + +L+ M   K  + DLS  + V+  L K+++Y E  + F
Sbjct: 715 LCKNGAVNDALDMLYSMTT-KGCIPDLSSYNTVIYGLVKEERYNEAFSIF 763



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 149/583 (25%), Positives = 265/583 (45%), Gaps = 43/583 (7%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            KSG +   + V  F  +  M  SP   ++T+++   +K  ++D  V +F  +  N   PD
Sbjct: 577  KSGRLGMAKRV--FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 634

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +  +N LI+ L K G    A+ +  ++      P   T+N L+ GL  EG++ E   L +
Sbjct: 635  VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 694

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            ++      PN++T+NT+++ LC+      AL +   M  +    C PD+ +YN++I GL 
Sbjct: 695  EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG---CIPDLSSYNTVIYGLV 751

Query: 236  KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA----KCLFIE------- 284
            K+   ++A  +  QMK + + P+  T  +++  F  +   KEA    K  F++       
Sbjct: 752  KEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDR 810

Query: 285  -------------------------MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
                                     +  +G+  D      +I + CK  K  + + L++ 
Sbjct: 811  SSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKK 870

Query: 320  MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
                GV+  T  YNSL+ G      I  A  LF  M   GC  D ++YN+L++A  K  +
Sbjct: 871  FKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMR 930

Query: 380  VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            +E+ + +  EM  +    + +TYNT++SGL +   L  A+ L   +      P   T+  
Sbjct: 931  IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP 990

Query: 440  YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
             +DGL K G + +A  +F  +    C+     YN L+NG    G  +  C LF  +  +G
Sbjct: 991  LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 1050

Query: 500  PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
              PD+ + + +I  LCK GQ++        +      P  +T+  L+ G  ++ +  + V
Sbjct: 1051 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAV 1110

Query: 560  VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             L ++M  +K +V +L   + ++  L K  K  E    +  LL
Sbjct: 1111 SLFNEM-QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1152



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/542 (25%), Positives = 254/542 (46%), Gaps = 40/542 (7%)

Query: 43   DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
            D  ++   ++  +K+G    +EA   F  + +M   P   ++  LL  L +  +   V+ 
Sbjct: 634  DVLAVNSLIDTLYKAGR--GDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 691

Query: 103  LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            L + +  +   P+L   N +++CLCK G  + A  +L  +      P+  ++N +I GL 
Sbjct: 692  LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 751

Query: 163  AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             E R  EA  +F ++      P+  T  T++    +      AL + ++   + G+  K 
Sbjct: 752  KEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGS--KT 808

Query: 223  DVVTYNSIIDGLCKDGFVDK-----------------------------------AKELL 247
            D  + +S+++G+ K   ++K                                   A EL+
Sbjct: 809  DRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 868

Query: 248  LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             + K   ++     YNSLICG    +    A+ LF EM + G  PD  T+N +++   K 
Sbjct: 869  KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 928

Query: 308  GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             +++++ ++ E M ++G     VTYN+++ G     R+ +A +L+ +++S+G      +Y
Sbjct: 929  MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 988

Query: 368  NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
              L++   K  ++EDA  L+ EML    + +   YN LL+G    GN      L   M  
Sbjct: 989  GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 1048

Query: 428  NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
              + PD  ++   ID LCK G + + +  F+ +     E  + TYN LI+GL K  RL+ 
Sbjct: 1049 QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 1108

Query: 488  ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
            A  LF+ +Q KG +P++ T +++I  L K G+  +A  +  ++  K   P+  T+  L+R
Sbjct: 1109 AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1168

Query: 548  GF 549
            G+
Sbjct: 1169 GY 1170



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 260/561 (46%), Gaps = 8/561 (1%)

Query: 43   DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
            +G +   F+N   KSG   S +A+  ++ M      P + +   +L  LAK+ +      
Sbjct: 529  NGYTHVLFINYYGKSGE--SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 586

Query: 103  LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            +F  L + G+ PD     ++I C  K      A  +   ++ +   P+ +  N LI+ L 
Sbjct: 587  VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 646

Query: 163  AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
              GR  EA R+F +L     +P   T+NTL+ GL R       + L EEM   + +   P
Sbjct: 647  KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM---YHSNYPP 703

Query: 223  DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            +++TYN+I+D LCK+G V+ A ++L  M  +   P++ +YN++I G    + + EA  +F
Sbjct: 704  NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 763

Query: 283  IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL-ELMIQRGVNPDTVTYNSLMDGFCL 341
             +M    + PD  T   ++    K G M +   ++ +  +Q G   D  + +SLM+G   
Sbjct: 764  CQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 822

Query: 342  VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
               I ++ E    + S G   D +    LI   CK +K  +A  L ++  S  +      
Sbjct: 823  KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 882

Query: 402  YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
            YN+L+ GL     +  A  L  +M+     PD FT+   +D + K+  + E ++V + + 
Sbjct: 883  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 942

Query: 462  NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                E    TYN +I+GL K  RL+ A  L++ L  +G  P   T   ++  L K G+++
Sbjct: 943  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 1002

Query: 522  KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
             A +L  +M    C  +   +  LL G        KV  L   M  ++ +  D+   + +
Sbjct: 1003 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM-VDQGINPDIKSYTII 1061

Query: 582  VDLLSKDKKYRECLNQFRHLL 602
            +D L K  +  + L  FR LL
Sbjct: 1062 IDTLCKAGQLNDGLTYFRQLL 1082



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 217/481 (45%), Gaps = 40/481 (8%)

Query: 59   NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
            N   N+A+     M      P ++S+  ++  L K ++Y+   S+F ++    L PD   
Sbjct: 718  NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYAT 776

Query: 119  LNLLINCLCKMGITSGAFVV--------------------LGRILRSCFTPNTVTF---- 154
            L  ++    K+G+   A  +                    +  IL+      ++ F    
Sbjct: 777  LCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEII 836

Query: 155  --------NF----LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                    +F    LI  LC + + +EA  L KK   F        +N+LI GL      
Sbjct: 837  ASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLI 896

Query: 203  LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             +A  LF EM  E G  C PD  TYN ++D + K   +++  ++  +M  +      +TY
Sbjct: 897  DIAEGLFAEM-KELG--CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 953

Query: 263  NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            N++I G       ++A  L+  +M  G  P   T+  +++   K G+++    L   M++
Sbjct: 954  NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 1013

Query: 323  RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
             G   +   YN L++G  + G   +   LF  MV +G   D+ SY I+I+  CK  ++ D
Sbjct: 1014 YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 1073

Query: 383  AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
             +  +R++L   + P +ITYN L+ GL +   L +A+ L ++MQ   +VP+ +T+ + I 
Sbjct: 1074 GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLIL 1133

Query: 443  GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
             L K G   EA ++++ +     +  + TYN LI G    G   +A   + R+   G +P
Sbjct: 1134 HLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLP 1193

Query: 503  D 503
            +
Sbjct: 1194 N 1194



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 227/490 (46%), Gaps = 49/490 (10%)

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL---CRTRNTLVALK 207
           T + N+++  +   GR+ + A +F  +       NV TF  +  GL      R+  VAL 
Sbjct: 215 TASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALP 274

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           + +E     G +   +  TYN ++  L K GF  +A E+   M    + P+V TY+ L+ 
Sbjct: 275 VMKEA----GIVL--NAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMV 328

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            F    D +    L  EM  +GV+P+V ++   I    +  + D+  R+L  M   G  P
Sbjct: 329 AFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKP 388

Query: 328 DTVTYNSLMDGFCLVGRISRARELFV---------------------------------- 353
           D +T+  L+   C  GRIS A+++F                                   
Sbjct: 389 DVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW 448

Query: 354 -SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
            +M + G   +V +Y  +I+A C+  +V +A+ ++ EM  + I P   +YN+L+SG  + 
Sbjct: 449 NAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 508

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
              GDAL+L   M ++   P+ +T   +I+   K+G  ++A+Q ++ +++      +   
Sbjct: 509 DRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAG 568

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N ++ GL K GRL  A ++FH L+  G  PD +T + MI    K  + D+A  +  DM  
Sbjct: 569 NAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 628

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
            NCVP  +   +L+    +  +  +   + +++    L  +D + ++ +   L ++ K +
Sbjct: 629 NNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAG-LGREGKVK 687

Query: 593 ECLNQFRHLL 602
           E +    HLL
Sbjct: 688 EVM----HLL 693



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 141/315 (44%), Gaps = 5/315 (1%)

Query: 291 QPDVVTFNAMINYNCK----DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           +P V    A  NY  +     G++  +  + ++M ++ V  +  T+ ++  G  + G + 
Sbjct: 208 KPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 267

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A      M   G   + Y+YN L+    K     +A+ +YR M+ + + PSV TY+ L+
Sbjct: 268 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 327

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
               +  ++   L L+ +M+ + V P+ +++   I  L +     EA ++   + N  C+
Sbjct: 328 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK 387

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + T+  LI  LC  GR+  A  +F +++     PD VT  T++      G      ++
Sbjct: 388 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI 447

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
              M+A     + V +  ++    Q  +  + + +  +M  + +V    S +S +   L 
Sbjct: 448 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 507

Query: 587 KDKKYRECLNQFRHL 601
            D ++ + L  F+H+
Sbjct: 508 AD-RFGDALELFKHM 521



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 2/164 (1%)

Query: 50   FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
             LN    +GN  + +  + F  M+    +P + S+TI++  L K  Q +  ++ F++L  
Sbjct: 1026 LLNGHRIAGN--TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLE 1083

Query: 110  NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
             GL PDL   NLLI+ L K      A  +   + +    PN  T+N LI  L   G+  E
Sbjct: 1084 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1143

Query: 170  AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
            A +++++L      PNV T+N LI G   + +T  A   +  M+
Sbjct: 1144 AGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMI 1187


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 253/563 (44%), Gaps = 67/563 (11%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +T L+  L K  + D    +F+   S+   P+     +LI+ LCK G   GA  VL  + 
Sbjct: 352 YTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEME 411

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
               +PN VTF+ +INGL   G + +A    +++     DPNVVT+ T+I+G  +     
Sbjct: 412 EKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQE 471

Query: 204 VALKLFEEM------VNEF------------GAICKP--------------DVVTYNSII 231
            AL ++ EM      VN+F            G I K               D V Y ++I
Sbjct: 472 AALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLI 531

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           DGL K G +  A ++  ++ ++N+ P+ + YN  I   C +   KEA+    EM   G++
Sbjct: 532 DGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLK 591

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PD VT+N MI    ++GK  K  +LL  M +  + P+ +TY++L+ G    G + +A+ L
Sbjct: 592 PDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYL 651

Query: 352 FVSMVSKG--------------CRH---------------------DVYSYNILINANCK 376
              M S G              C                       D+  YN L+   C 
Sbjct: 652 LNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCY 711

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           +     A+ +  EM    I P  IT+N L+ G F+ G+L +A    D+M  + + P+  T
Sbjct: 712 NGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVAT 771

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           F T + GL   G + E+  V   ++    E    TY+ L+ G  K      A +L+  + 
Sbjct: 772 FNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMV 831

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            KG +P V T + +I    K G M +A +L  +M+ +  +P+  T+  L+ G+ +    +
Sbjct: 832 GKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGT 891

Query: 557 KVVVLLHKMAAEKLVVSDLSLSS 579
           +V   L  M  +    S  +LSS
Sbjct: 892 EVRKFLKDMKEKGFSPSKGTLSS 914



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 253/526 (48%), Gaps = 8/526 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL--NLLINCLCKMGITSG 134
           P   +T  T+L+  L ++ + D   +L + +   G    L V+  N L++  CK+G    
Sbjct: 134 PFDAVTVNTVLVG-LCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMET 192

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           AF V  R+       + V +N L+ GLC  G +  A  +   +     +PNVVT+   I 
Sbjct: 193 AFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIV 252

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             CR      A  L+EEMV + G +  PDVVT ++++ GLCKDG   +A  L  +M+   
Sbjct: 253 EYCRRNAVDDAFSLYEEMVRK-GVL--PDVVTLSALVGGLCKDGRFSEAYALFREMEKIG 309

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PN +TY  LI          E+  L  E++  GV  D++ + A++++ CK+GK+D+  
Sbjct: 310 AAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAK 369

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            +    +     P+ VTY  L+D  C  G +  A ++   M  K    +V +++ +IN  
Sbjct: 370 DMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGL 429

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K   V  A    REM    I P+V+TY T++ G F+      AL +  +M    V  + 
Sbjct: 430 VKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNK 489

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           F   + ++GL KNG + +A  +F+ +      L    Y  LI+GL K G L  A K+   
Sbjct: 490 FIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQE 549

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           L  K  +PD V  +  I+ LC  G+  +A   L +M++    P +VT+ T++    +  K
Sbjct: 550 LTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGK 609

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD--KKYRECLNQF 598
            +K + LL+ M    +  + ++ S+ +V L      +K +  LN+ 
Sbjct: 610 TAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEM 655



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 265/550 (48%), Gaps = 40/550 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   ++ M++    P + + + L+  L K+ ++    +LF+ +   G  P+     +L
Sbjct: 261 DDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCML 320

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K    + +  +LG ++      + + +  L++ LC EG+I EA  +F+       
Sbjct: 321 IDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNH 380

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VT+  LI+ LC+  N   A ++  EM  +      P+VVT++SII+GL K G+V K
Sbjct: 381 TPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS---ISPNVVTFSSIINGLVKRGWVGK 437

Query: 243 AKELLLQMKDRNINPNVITYNSLICG-FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           A + + +MK+R I+PNV+TY ++I G F C+   + A  ++ EM+  GV+ +    ++++
Sbjct: 438 ATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQ-EAALDVYHEMLCEGVEVNKFIVDSLV 496

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N   K+GK++K   L   M +RGV  D V Y +L+DG    G +  A ++   +  K   
Sbjct: 497 NGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLL 556

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D   YN+ IN  C   K ++A     EM S  ++P  +TYNT+++   + G    ALKL
Sbjct: 557 PDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKL 616

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA---------------------------- 453
           ++ M+ + + P+  T++T I GL + G V +A                            
Sbjct: 617 LNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQ 676

Query: 454 -------VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
                  +++ + + N      I  YN L+  LC  G  + A  +   +  +G  PD +T
Sbjct: 677 GRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTIT 736

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            + +I    K G +D A      M      P+  TF TLL G     +  +  ++L++M 
Sbjct: 737 FNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMK 796

Query: 567 AEKLVVSDLS 576
              +  S+L+
Sbjct: 797 KRGIEPSNLT 806



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 246/502 (49%), Gaps = 47/502 (9%)

Query: 73  IKMKPSPG--------------MTSFTILLTMLAKNKQYDTV---VSLFKRLNSNGLFPD 115
           ++ +P PG              + S    L +L  ++  DTV   V +       GL P+
Sbjct: 63  VRFRPVPGDSLSLNSILLSHRALRSLRPALALLRSSESVDTVSYNVVMSGFSEQGGLAPE 122

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                 L+  +CK G+   A                VT N ++ GLC +GR+  AA L +
Sbjct: 123 A-----LLAEMCKRGVPFDA----------------VTVNTVLVGLCRDGRVDRAAALAE 161

Query: 176 KL----NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
            +     +   D  VV +N+L++G C+  +   A  + E M  +   +   DVV YNS++
Sbjct: 162 VMVRGGGIGGLD--VVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGV---DVVGYNSLV 216

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
            GLC+ G VD A++++  MK   + PNV+TY   I  +C  +   +A  L+ EM+  GV 
Sbjct: 217 AGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVL 276

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PDVVT +A++   CKDG+  +   L   M + G  P+ VTY  L+D      R + +  L
Sbjct: 277 PDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSL 336

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              +VS+G   D+  Y  L++  CK+ K+++A  ++R  LS+   P+ +TY  L+  L +
Sbjct: 337 LGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCK 396

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            GN+  A +++ +M+   + P+  TF++ I+GL K G+V +A    + ++    +  + T
Sbjct: 397 AGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVT 456

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           Y  +I+G  K    + A  ++H +  +G   +     ++++ L K G+++KA  L  +M 
Sbjct: 457 YGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMN 516

Query: 532 AKNCVPSEVTFCTLLRGFVQNN 553
            +  +   V + TL+ G  +  
Sbjct: 517 ERGVLLDHVNYTTLIDGLFKTG 538



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 250/546 (45%), Gaps = 34/546 (6%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           LS +H  +G +    ++   K+GN+   E V     M +   SP + +F+ ++  L K  
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQV--LSEMEEKSISPNVVTFSSIINGLVKRG 433

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
                    + +   G+ P++     +I+   K      A  V   +L      N    +
Sbjct: 434 WVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVD 493

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            L+NGL   G+I +A  LF+++N      + V + TLI+GL +T N   A K+ +E+  +
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK 553

Query: 216 ------------FGAIC--------------------KPDVVTYNSIIDGLCKDGFVDKA 243
                          +C                    KPD VTYN++I    ++G   KA
Sbjct: 554 NLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKA 613

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +LL  MK  +I PN+ITY++LI G       ++AK L  EM  +G  P  +T   ++  
Sbjct: 614 LKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA 673

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             +  + D +  + E M+  G+  D   YN+L+   C  G   +A  +   M  +G   D
Sbjct: 674 CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPD 733

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             ++N LI  + K   +++A   Y +ML   I P+V T+NTLL GL   G +G++  +++
Sbjct: 734 TITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLN 793

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M+   + P + T+   + G  K    +EAV+++  +       ++ TYN LI+   K+G
Sbjct: 794 EMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVG 853

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A +LF+ +Q++G +P   T   ++    K     +    L DM+ K   PS+ T  
Sbjct: 854 MMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLS 913

Query: 544 TLLRGF 549
           ++ R F
Sbjct: 914 SISRAF 919



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 215/423 (50%), Gaps = 15/423 (3%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP----DVVTYNSIIDGLCKDGFV 240
           + V++N +++G    +  L    L  EM       CK     D VT N+++ GLC+DG V
Sbjct: 102 DTVSYNVVMSGFSE-QGGLAPEALLAEM-------CKRGVPFDAVTVNTVLVGLCRDGRV 153

Query: 241 DKAKELL-LQMKDRNINP-NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
           D+A  L  + ++   I   +V+ +NSL+ G+C V D + A  +   M   GV  DVV +N
Sbjct: 154 DRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYN 213

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           +++   C+ G++D    +++ M + GV P+ VTY   +  +C    +  A  L+  MV K
Sbjct: 214 SLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRK 273

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   DV + + L+   CKD +  +A  L+REM      P+ +TY  L+  L +     ++
Sbjct: 274 GVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNES 333

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           L L+ ++    VV D   +   +D LCK G + EA  +F+   +        TY  LI+ 
Sbjct: 334 LSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDA 393

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LCK G +  A ++   ++ K   P+VVT S++I+ L K G + KA D + +M+ +   P+
Sbjct: 394 LCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPN 453

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            VT+ T++ G  +   +   + + H+M  E + V+   + S +V+ L K+ K  +    F
Sbjct: 454 VVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDS-LVNGLKKNGKIEKAEALF 512

Query: 599 RHL 601
           R +
Sbjct: 513 REM 515



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 209/443 (47%), Gaps = 7/443 (1%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+  L KN + +   +LF+ +N  G+  D      LI+ L K G    AF V   +    
Sbjct: 495 LVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKN 554

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             P+ V +N  IN LC  G+  EA    +++      P+ VT+NT+I    R   T  AL
Sbjct: 555 LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL 614

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           KL   M     +  KP+++TY+++I GL + G V+KAK LL +M     +P  +T+  ++
Sbjct: 615 KLLNGMKR---SSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVL 671

Query: 267 CGFCCVDDWKEAKCLFIE--MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
               C    +    L I   MM+ G+  D+  +N ++   C +G   K   +LE M  RG
Sbjct: 672 Q--ACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRG 729

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PDT+T+N+L+ G    G +  A   +  M+  G   +V ++N L+       ++ ++ 
Sbjct: 730 IAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESD 789

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            +  EM    I PS +TY+ L++G  +  N  +A++L  +M     +P   T+   I   
Sbjct: 790 MVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDF 849

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K G + +A ++F  ++N        TY+ L++G  K+       K    ++ KG  P  
Sbjct: 850 SKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSK 909

Query: 505 VTCSTMIHWLCKEGQMDKANDLL 527
            T S++     K G   +A  LL
Sbjct: 910 GTLSSISRAFSKPGMSWEARRLL 932



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 182/371 (49%), Gaps = 6/371 (1%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L ML K+K+ +   S  + + S GL PD    N +I    + G T+ A  +L  + RS  
Sbjct: 569 LCMLGKSKEAE---SFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSI 625

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            PN +T++ LI GL   G + +A  L  +++     P  +T   ++    + R + + L+
Sbjct: 626 KPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILE 685

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           + E M+N    +C  D+  YN+++  LC +G   KA  +L +M  R I P+ IT+N+LI 
Sbjct: 686 IHEWMMN--AGLCA-DITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALIL 742

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G         A   + +M+ +G+ P+V TFN ++      G++ + + +L  M +RG+ P
Sbjct: 743 GHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEP 802

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             +TY+ L+ G+        A  L+  MV KG    V +YN LI+   K   +  A  L+
Sbjct: 803 SNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELF 862

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            EM +  + P+  TY+ L+SG  ++ N  +  K +  M+     P   T ++      K 
Sbjct: 863 NEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKP 922

Query: 448 GFVLEAVQVFQ 458
           G   EA ++ +
Sbjct: 923 GMSWEARRLLK 933



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 140/281 (49%), Gaps = 12/281 (4%)

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           DTV+YN +M GF   G ++    L   M  +G   D  + N ++   C+D +V+ A  L 
Sbjct: 102 DTVSYNVVMSGFSEQGGLA-PEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 388 REMLSERIRPS------VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
             M    +R        V+ +N+L+ G  +VG++  A  + ++M+   V  D   + + +
Sbjct: 161 EVM----VRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLV 216

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            GLC+ G V  A  +   ++    E  + TY   I   C+   +  A  L+  +  KG +
Sbjct: 217 AGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVL 276

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           PDVVT S ++  LCK+G+  +A  L  +ME     P+ VT+C L+    +  + ++ + L
Sbjct: 277 PDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSL 336

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           L ++ + + VV DL + + ++D L K+ K  E  + FRH L
Sbjct: 337 LGEVVS-RGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHAL 376


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 253/488 (51%), Gaps = 4/488 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M+     P + ++++L+    K +  +TV+ L + + ++G+ P+++   + I
Sbjct: 178 EALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICI 237

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L +      A+ +L ++      P+ +T   LI  LC  GRI +A  +F K+      
Sbjct: 238 RVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQK 297

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++      ++   ++++  M  +       +VV Y ++ID LC+ G V +A
Sbjct: 298 PDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG---YNDNVVAYTAVIDALCQVGRVFEA 354

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E+  +MK + I P   +YNSLI GF   D + +A  LF  M  +G +P+  T    INY
Sbjct: 355 LEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINY 414

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G+  K  +  ELM  +G+ PD V  N+++ G    GR+  A+ +F  + + G   D
Sbjct: 415 YGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPD 474

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y ++I    K  K ++AV ++ +M+     P V+  N+L+  L++ G   +A ++  
Sbjct: 475 TITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFY 534

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +++  ++ P   T+ T + GL + G V E + + + + +      + TYN +++ LCK G
Sbjct: 535 QLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNG 594

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A  + + +  KG IPD+ + +T+I+ L KE + ++A  +   M+ K  +P   T C
Sbjct: 595 AVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLC 653

Query: 544 TLLRGFVQ 551
           T+L  FV+
Sbjct: 654 TILPSFVK 661



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/583 (25%), Positives = 265/583 (45%), Gaps = 43/583 (7%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            KSG +   + V  F  +  M  SP   ++T+++   +K  ++D  V +F  +  N   PD
Sbjct: 452  KSGRLGMAKRV--FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 509

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +  +N LI+ L K G    A+ +  ++      P   T+N L+ GL  EG++ E   L +
Sbjct: 510  VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 569

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            ++      PN++T+NT+++ LC+      AL +   M  +    C PD+ +YN++I GL 
Sbjct: 570  EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG---CIPDLSSYNTVIYGLV 626

Query: 236  KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA----KCLFIE------- 284
            K+   ++A  +  QMK + + P+  T  +++  F  +   KEA    K  F++       
Sbjct: 627  KEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDR 685

Query: 285  -------------------------MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
                                     +  +G+  D      +I + CK  K  + + L++ 
Sbjct: 686  SSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKK 745

Query: 320  MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
                GV+  T  YNSL+ G      I  A  LF  M   GC  D ++YN+L++A  K  +
Sbjct: 746  FKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMR 805

Query: 380  VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            +E+ + +  EM  +    + +TYNT++SGL +   L  A+ L   +      P   T+  
Sbjct: 806  IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP 865

Query: 440  YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
             +DGL K G + +A  +F  +    C+     YN L+NG    G  +  C LF  +  +G
Sbjct: 866  LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 925

Query: 500  PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
              PD+ + + +I  LCK GQ++        +      P  +T+  L+ G  ++ +  + V
Sbjct: 926  INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAV 985

Query: 560  VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             L ++M  +K +V +L   + ++  L K  K  E    +  LL
Sbjct: 986  SLFNEM-QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1027



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 248/530 (46%), Gaps = 4/530 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD M +      + +F  +   L       +       +   G+  + +  N L+  L K
Sbjct: 113 FDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVK 172

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A  V   ++     P+  T++ L+        +     L +++      PNV +
Sbjct: 173 SGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYS 232

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +   I  L + +    A ++  +M NE    CKPDV+T+  +I  LC  G +  AK++  
Sbjct: 233 YTICIRVLGQAKRFDEAYRILAKMENEG---CKPDVITHTVLIQVLCDAGRISDAKDVFW 289

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK  +  P+ +TY +L+  F    D +    ++  M  +G   +VV + A+I+  C+ G
Sbjct: 290 KMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVG 349

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ +   + + M Q+G+ P+  +YNSL+ GF    R   A ELF  M   G + + Y++ 
Sbjct: 350 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 409

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           + IN   K  +   A+  Y  M S+ I P V+  N +L GL + G LG A ++  +++  
Sbjct: 410 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 469

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V PD+ T+   I    K     EAV++F  +    C   +   N LI+ L K GR   A
Sbjct: 470 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 529

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            ++F++L+     P   T +T++  L +EG++ +   LL +M   N  P+ +T+ T+L  
Sbjct: 530 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 589

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
             +N   +  + +L+ M   K  + DLS  + V+  L K+++Y E  + F
Sbjct: 590 LCKNGAVNDALDMLYSMTT-KGCIPDLSSYNTVIYGLVKEERYNEAFSIF 638



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 260/561 (46%), Gaps = 8/561 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           +G +   F+N   KSG   S +A+  ++ M      P + +   +L  LAK+ +      
Sbjct: 404 NGYTHVLFINYYGKSGE--SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 461

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  L + G+ PD     ++I C  K      A  +   ++ +   P+ +  N LI+ L 
Sbjct: 462 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 521

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GR  EA R+F +L     +P   T+NTL+ GL R       + L EEM   + +   P
Sbjct: 522 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM---YHSNYPP 578

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +++TYN+I+D LCK+G V+ A ++L  M  +   P++ +YN++I G    + + EA  +F
Sbjct: 579 NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 638

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL-ELMIQRGVNPDTVTYNSLMDGFCL 341
            + M   + PD  T   ++    K G M +   ++ +  +Q G   D  + +SLM+G   
Sbjct: 639 CQ-MKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 697

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
              I ++ E    + S G   D +    LI   CK +K  +A  L ++  S  +      
Sbjct: 698 KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 757

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN+L+ GL     +  A  L  +M+     PD FT+   +D + K+  + E ++V + + 
Sbjct: 758 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 817

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               E    TYN +I+GL K  RL+ A  L++ L  +G  P   T   ++  L K G+++
Sbjct: 818 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 877

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A +L  +M    C  +   +  LL G        KV  L   M  ++ +  D+   + +
Sbjct: 878 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM-VDQGINPDIKSYTII 936

Query: 582 VDLLSKDKKYRECLNQFRHLL 602
           +D L K  +  + L  FR LL
Sbjct: 937 IDTLCKAGQLNDGLTYFRQLL 957



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 138/542 (25%), Positives = 254/542 (46%), Gaps = 40/542 (7%)

Query: 43   DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
            D  ++   ++  +K+G    +EA   F  + +M   P   ++  LL  L +  +   V+ 
Sbjct: 509  DVLAVNSLIDTLYKAGR--GDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 566

Query: 103  LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            L + +  +   P+L   N +++CLCK G  + A  +L  +      P+  ++N +I GL 
Sbjct: 567  LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 626

Query: 163  AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             E R  EA  +F ++      P+  T  T++    +      AL + ++   + G+  K 
Sbjct: 627  KEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGS--KT 683

Query: 223  DVVTYNSIIDGLCKDGFVDK-----------------------------------AKELL 247
            D  + +S+++G+ K   ++K                                   A EL+
Sbjct: 684  DRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 743

Query: 248  LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             + K   ++     YNSLICG    +    A+ LF EM + G  PD  T+N +++   K 
Sbjct: 744  KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 803

Query: 308  GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             +++++ ++ E M ++G     VTYN+++ G     R+ +A +L+ +++S+G      +Y
Sbjct: 804  MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 863

Query: 368  NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
              L++   K  ++EDA  L+ EML    + +   YN LL+G    GN      L   M  
Sbjct: 864  GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 923

Query: 428  NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
              + PD  ++   ID LCK G + + +  F+ +     E  + TYN LI+GL K  RL+ 
Sbjct: 924  QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 983

Query: 488  ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
            A  LF+ +Q KG +P++ T +++I  L K G+  +A  +  ++  K   P+  T+  L+R
Sbjct: 984  AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1043

Query: 548  GF 549
            G+
Sbjct: 1044 GY 1045



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 226/490 (46%), Gaps = 45/490 (9%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT---RNTLVAL 206
            T + N+++  +   GR+ + A +F  +       NV TF  +  GL      R+  VAL
Sbjct: 89  TTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL 148

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            + +E     G +   +  TYN ++  L K GF  +A E+   M    + P+V TY+ L+
Sbjct: 149 PVMKEA----GIVL--NAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 202

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
             F    D +    L  EM  +GV+P+V ++   I    +  + D+  R+L  M   G  
Sbjct: 203 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK 262

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFV--------------------------------- 353
           PD +T+  L+   C  GRIS A+++F                                  
Sbjct: 263 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI 322

Query: 354 --SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
             +M + G   +V +Y  +I+A C+  +V +A+ ++ EM  + I P   +YN+L+SG  +
Sbjct: 323 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 382

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
               GDAL+L   M ++   P+ +T   +I+   K+G  ++A+Q ++ +++      +  
Sbjct: 383 ADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVA 442

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
            N ++ GL K GRL  A ++FH L+  G  PD +T + MI    K  + D+A  +  DM 
Sbjct: 443 GNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMI 502

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
             NCVP  +   +L+    +  +  +   + +++    L  +D + ++ +   L ++ K 
Sbjct: 503 ENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAG-LGREGKV 561

Query: 592 RECLNQFRHL 601
           +E ++    +
Sbjct: 562 KEVMHLLEEM 571



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 221/488 (45%), Gaps = 5/488 (1%)

Query: 59   NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
            N   N+A+     M      P ++S+  ++  L K ++Y+   S+F ++    L PD   
Sbjct: 593  NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYAT 651

Query: 119  LNLLINCLCKMGITSGAF-VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
            L  ++    K+G+   A  ++    L+     +  + + L+ G+  +  I ++    + +
Sbjct: 652  LCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEII 711

Query: 178  NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                   +      LI  LC+ +  L A +L ++    FG   K  +  YNS+I GL  +
Sbjct: 712  ASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKF-KSFGVSLKTGL--YNSLICGLVDE 768

Query: 238  GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
              +D A+ L  +MK+    P+  TYN L+         +E   +  EM   G +   VT+
Sbjct: 769  NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 828

Query: 298  NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
            N +I+   K  ++++   L   ++ +G +P   TY  L+DG    GRI  A  LF  M+ 
Sbjct: 829  NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 888

Query: 358  KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
             GC+ +   YNIL+N +      E    L+++M+ + I P + +Y  ++  L + G L D
Sbjct: 889  YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 948

Query: 418  ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
             L    ++    + PD  T+   IDGL K+  + EAV +F  ++       + TYN LI 
Sbjct: 949  GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLIL 1008

Query: 478  GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
             L K G+   A K++  L  KG  P+V T + +I      G  D A      M    C+P
Sbjct: 1009 HLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLP 1068

Query: 538  SEVTFCTL 545
            +  T+  L
Sbjct: 1069 NSSTYMQL 1076



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 191/393 (48%), Gaps = 3/393 (0%)

Query: 87   LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
            L+  + K    +  +   + + S+G+  D F L  LI  LCK      A  ++ +     
Sbjct: 691  LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 750

Query: 147  FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             +  T  +N LI GL  E  I  A  LF ++    C P+  T+N L++ + ++      L
Sbjct: 751  VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 810

Query: 207  KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            K+ EEM  +     +   VTYN+II GL K   +++A +L   +  +  +P   TY  L+
Sbjct: 811  KVQEEMHRKG---YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 867

Query: 267  CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
             G       ++A+ LF EM++ G + +   +N ++N +   G  +KV  L + M+ +G+N
Sbjct: 868  DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 927

Query: 327  PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            PD  +Y  ++D  C  G+++     F  ++  G   D+ +YN+LI+   K +++E+AV L
Sbjct: 928  PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 987

Query: 387  YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
            + EM  + I P++ TYN+L+  L + G   +A K+ +++      P+ FT+   I G   
Sbjct: 988  FNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSV 1047

Query: 447  NGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            +G    A   +  +    C     TY  L N L
Sbjct: 1048 SGSTDSAYAAYGRMIVGGCLPNSSTYMQLPNQL 1080



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 141/315 (44%), Gaps = 5/315 (1%)

Query: 291 QPDVVTFNAMINYNCK----DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           +P V    A  NY  +     G++  +  + ++M ++ V  +  T+ ++  G  + G + 
Sbjct: 83  KPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 142

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A      M   G   + Y+YN L+    K     +A+ +YR M+ + + PSV TY+ L+
Sbjct: 143 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 202

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
               +  ++   L L+ +M+ + V P+ +++   I  L +     EA ++   + N  C+
Sbjct: 203 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK 262

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + T+  LI  LC  GR+  A  +F +++     PD VT  T++      G      ++
Sbjct: 263 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI 322

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
              M+A     + V +  ++    Q  +  + + +  +M  + +V    S +S +   L 
Sbjct: 323 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 382

Query: 587 KDKKYRECLNQFRHL 601
            D ++ + L  F+H+
Sbjct: 383 AD-RFGDALELFKHM 396



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 5/178 (2%)

Query: 50   FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
             LN    +GN  + +  + F  M+    +P + S+TI++  L K  Q +  ++ F++L  
Sbjct: 901  LLNGHRIAGN--TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLE 958

Query: 110  NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
             GL PDL   NLLI+ L K      A  +   + +    PN  T+N LI  L   G+  E
Sbjct: 959  MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1018

Query: 170  AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            A +++++L      PNV T+N LI G   + +T  A   +  M+   G  C P+  TY
Sbjct: 1019 AGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMI--VGG-CLPNSSTY 1073



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 2/141 (1%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            K+G +  N+ + +F  +++M   P + ++ +L+  L K+K+ +  VSLF  +   G+ P+
Sbjct: 942  KAGQL--NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPN 999

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            L+  N LI  L K G  + A  +   +L   + PN  T+N LI G    G    A   + 
Sbjct: 1000 LYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYG 1059

Query: 176  KLNVFACDPNVVTFNTLINGL 196
            ++ V  C PN  T+  L N L
Sbjct: 1060 RMIVGGCLPNSSTYMQLPNQL 1080


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 243/494 (49%), Gaps = 8/494 (1%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L+  L   GL PD    N +I   CK G  + A      +  S    +T T N L+ G C
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYC 225

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
               + +A  L   + +  C  N  ++  LI GL   R    AL L   MV +    C  
Sbjct: 226 RTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDG---CSL 282

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           ++  Y  +I GLCK+G +  A+ LL +M  R + P+V TYN++I G+C     K+A  + 
Sbjct: 283 NLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 342

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M  NG  PD  T+N++I Y    GK+D+   LL   I RG  P  +T+ +L++G+C  
Sbjct: 343 ALMEQNGCNPDDWTYNSLI-YGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKA 401

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            RI  A  +  +M+S  C+ D+ +Y +LIN   K  ++++A     EM +  + P+V+ Y
Sbjct: 402 ERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIY 461

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            +++ G  +VG +G AL++   M+     P+++T+ + I GL ++  + +A+ +   ++ 
Sbjct: 462 TSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQE 521

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 +  Y  LI G CK      A +LF  ++  G  PD    + +   LCK G+ ++
Sbjct: 522 DGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEE 581

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A   L+    K  V ++VT+ +L+ GF +        VL+ KM  E    +DL   S ++
Sbjct: 582 AYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG-CKADLYTYSVLL 637

Query: 583 DLLSKDKKYRECLN 596
             L K KK  E L+
Sbjct: 638 QALCKQKKLNEALS 651



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 160/599 (26%), Positives = 251/599 (41%), Gaps = 116/599 (19%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+     M++   S  +  +T+L+  L K  +      L   +   G+ P ++  N +I
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G    A  +   + ++   P+  T+N LI GLC  G++ EA  L          
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFT 385

Query: 184 PNVVTFNTLINGLC---------RTRNTLVA----------------------LKLFEEM 212
           P V+TF  LING C         R ++ +++                      LK  +E 
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 213 VNE-FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           +NE F     P+VV Y SIIDG CK G V  A E+   M+    +PN  TY SLI G   
Sbjct: 446 LNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT-- 329
                +A  L  +M ++G+ P V+ +  +I   CK  + D   RL E+M + G+ PD   
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQA 565

Query: 330 ------------------------------VTYNSLMDGFCLVGRISRARELFVSMVSKG 359
                                         VTY SL+DGF   G    A  L   MV++G
Sbjct: 566 YNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 625

Query: 360 CRHDVYSYNILINANCKDQKVEDAVC---------------------------------- 385
           C+ D+Y+Y++L+ A CK +K+ +A+                                   
Sbjct: 626 CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAK 685

Query: 386 -LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ EM+S   +PS  TY   +S   ++G + +A  LI +M+ + V PD  T+  +I+G 
Sbjct: 686 SLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGC 745

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG----------------RLKTA 488
              G++  A    + + +  CE    TY  L+    KM                  L T 
Sbjct: 746 GHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTV 805

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
            +L  R+   G  P VVT S++I   CK  ++++A  LL  M  K   P+E  +  L++
Sbjct: 806 WQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIK 864



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 225/449 (50%), Gaps = 7/449 (1%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           +   +LI  L +      A V++  +++   + N   +  LI GLC EGRI +A  L  +
Sbjct: 250 YSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDE 309

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           + +    P+V T+N +I+G C++     AL + + ++ + G  C PD  TYNS+I GLC 
Sbjct: 310 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMEQNG--CNPDDWTYNSLIYGLC- 365

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G +D+A+ELL     R   P VIT+ +LI G+C  +   +A  +   M+ +  + D+  
Sbjct: 366 GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQA 425

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +IN   K  ++ +    L  M   G+ P+ V Y S++DG+C VG +  A E+F  M 
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLME 485

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +GC  + ++Y  LI    +D+K+  A+ L  +M  + I P VI Y TL+ G  +     
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFD 545

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +L + M+ N + PD   +    D LCK+G   EA      +R      ++ TY  L+
Sbjct: 546 NAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--VRKGVVLTKV-TYTSLV 602

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G  K G    A  L  ++ ++G   D+ T S ++  LCK+ ++++A  +L  M      
Sbjct: 603 DGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVK 662

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            + V +  ++   ++  K      L ++M
Sbjct: 663 CNIVAYTIIISEMIKEGKHDHAKSLFNEM 691



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 229/504 (45%), Gaps = 48/504 (9%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+TIL+  L + +     + L   +  +G   +L +  LLI  LCK G    A  +L  +
Sbjct: 251 SYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEM 310

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P+  T+N +I+G C  GR+ +A  +   +    C+P+  T+N+LI GLC  +  
Sbjct: 311 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGK-- 368

Query: 203 LVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFVD------------------ 241
              L   EE++N  GAI +   P V+T+ ++I+G CK   +D                  
Sbjct: 369 ---LDEAEELLN--GAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423

Query: 242 -----------------KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
                            +AKE L +M    + PNV+ Y S+I G+C V     A  +F  
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKL 483

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M   G  P+  T+ ++I    +D K+ K   L+  M + G+ P  + Y +L+ G C    
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHE 543

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
              A  LF  M   G   D  +YN+L +A CK  + E+A   Y  ++ + +  + +TY +
Sbjct: 544 FDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTS 600

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ G  + GN   A  LI+KM       D +T++  +  LCK   + EA+ +   +    
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSG 660

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +  I  Y  +I+ + K G+   A  LF+ +   G  P   T +  I   CK GQ+++A 
Sbjct: 661 VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAE 720

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRG 548
            L+ +ME     P  VT+   + G
Sbjct: 721 HLIGEMERDGVTPDVVTYHIFING 744



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 194/453 (42%), Gaps = 57/453 (12%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +PG+ ++T L+    K  ++D    LF+ +  NGL PD    N+L + LCK G    A+ 
Sbjct: 525 TPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYS 584

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            L   +R       VT+  L++G    G    AA L +K+    C  ++ T++ L+  LC
Sbjct: 585 FL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALC 641

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + +    AL + ++M    G  C  ++V Y  II  + K+G  D AK L  +M      P
Sbjct: 642 KQKKLNEALSILDQMTVS-GVKC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK----- 312
           +  TY   I  +C +   +EA+ L  EM  +GV PDVVT++  IN     G MD+     
Sbjct: 699 SATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTL 758

Query: 313 ----------------------------------------------VNRLLELMIQRGVN 326
                                                         V +LLE M++ G+N
Sbjct: 759 KRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLN 818

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P  VTY+S++ GFC   R+  A  L   M+ K    +   Y +LI   C  +     V  
Sbjct: 819 PTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSF 878

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             +M+    +P + +Y+ L+ GL   G+   A  L   +   D   +   +    DGL K
Sbjct: 879 VTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLK 938

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            G V    Q+  A+ N  C +  E+Y+ L + +
Sbjct: 939 AGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 184/407 (45%), Gaps = 38/407 (9%)

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN  +  L +    +   +L   +    + P+ +TYN++I  +C       A   F  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           ++G+Q D  T NA++   C+   + K   LL +M   G   +  +Y  L+ G      + 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  L   MV  GC  +++ Y +LI   CK+ ++ DA  L  EM    + PSV TYN ++
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK-------------------- 446
            G  + G + DAL +   M+ N   PD +T+ + I GLC                     
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTP 386

Query: 447 ---------NGF-----VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
                    NG+     + +A++V   + +  C+L ++ Y  LIN L K  RLK A +  
Sbjct: 387 TVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETL 446

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           + +   G  P+VV  +++I   CK G +  A ++   ME + C P+  T+ +L+ G +Q+
Sbjct: 447 NEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQD 506

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
            K  K + L+ KM  + +    ++ ++    L+    K  E  N FR
Sbjct: 507 KKLHKAMALITKMQEDGITPGVIAYTT----LIQGQCKKHEFDNAFR 549



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 150/327 (45%), Gaps = 19/327 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+   D M        + ++TI+++ + K  ++D   SLF  + S+G  P      + 
Sbjct: 647 NEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVF 706

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CK+G    A  ++G + R   TP+ VT++  ING    G +  A    K++   +C
Sbjct: 707 ISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASC 766

Query: 183 DPNVVTFNTLI----------------NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           +PN  T+  L+                +G+          +L E M+        P VVT
Sbjct: 767 EPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHG---LNPTVVT 823

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+SII G CK   +++A  LL  M  + I+PN   Y  LI   C +  + +      +M+
Sbjct: 824 YSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMI 883

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           + G QP + +++ +I   C +G  D+   L   ++    N + V +  L DG    G + 
Sbjct: 884 EFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVD 943

Query: 347 RARELFVSMVSKGCRHDVYSYNILINA 373
              +L  +M ++ CR D  SY++L ++
Sbjct: 944 FCSQLLAAMDNRHCRIDSESYSMLTDS 970



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 152/342 (44%), Gaps = 21/342 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+GN  ++ A    + M+       + ++++LL  L K K+ +  +S+  ++  +G+  +
Sbjct: 607 KAGN--TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +    ++I+ + K G    A  +   ++ S   P+  T+   I+  C  G+I EA  L  
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIG 724

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID--- 232
           ++      P+VVT++  ING         A    + MV+   A C+P+  TY  ++    
Sbjct: 725 EMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVD---ASCEPNCWTYWLLLKHFL 781

Query: 233 --GLCKDGFVDKAK-----------ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
              L    ++D +            +LL +M    +NP V+TY+S+I GFC     +EA 
Sbjct: 782 KMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEAC 841

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L   M+   + P+   +  +I   C      K    +  MI+ G  P   +Y+ L+ G 
Sbjct: 842 VLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGL 901

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           C  G   RA+ LF  ++     H+  ++ IL +   K   V+
Sbjct: 902 CDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVD 943



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 3/119 (2%)

Query: 450 VLEAVQVFQAIRNC---KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           V EAV   QAIR     +  L  + YN  +  L +    +   KL+  L  +G +PD VT
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVT 181

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            +TMI   CK+G +  A+     +          T   LL G+ + +   K   LL  M
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMM 240


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 233/489 (47%), Gaps = 32/489 (6%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P   S+ +++  + +  +    V +F  +    + P+    N +I+   K G     F
Sbjct: 11  PPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF 70

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  +++     PN +T+N L++GLC  GR+ E + L  ++      P+  T++ L +GL
Sbjct: 71  RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 130

Query: 197 CRTRNTLVALKLFEEMVNE------------FGAICK--------------------PDV 224
            R  ++   L LF + +                 +CK                    P  
Sbjct: 131 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 190

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           V YN++I+G C+ G ++ A     QMK R+I P+ ITYN+LI G C  +    A+ L +E
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M DNGV P V TFN +I+   + G+++K   +L  M + G+ P+ V+Y S+++ FC  G+
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 310

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           I  A  +   M  K    +   YN +I+A  +    + A  L  +M S  I PS++TYN 
Sbjct: 311 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 370

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ GL     + +A ++I+ +  + ++PD+ ++ T I   C  G + +A+ + Q +    
Sbjct: 371 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 430

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +  + TY+ LI+GL   GRL     L+ ++     +P     + M+    K G   KA 
Sbjct: 431 IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAE 490

Query: 525 DLLLDMEAK 533
           DL  +M  K
Sbjct: 491 DLRKEMLQK 499



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/474 (28%), Positives = 231/474 (48%), Gaps = 39/474 (8%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN  ++N +I G+   GR  +A  +F ++   A  PN +T+NT+I+G  +  +     +L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
            ++MV       KP+ +TYN ++ GLC+ G + +   LL +M  + + P+  TY+ L  G
Sbjct: 73  RDQMVCHG---LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 129

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
                D K    LF + + NGV     T + ++N  CKDGK+     +L+ ++  G+ P 
Sbjct: 130 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 189

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            V YN+L++G+C  G +  A   F  M S+  + D  +YN LIN  CK +++ +A  L  
Sbjct: 190 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 249

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM    + P+V T+NTL+    + G L     ++ +MQ N + P+  ++ + ++  CKNG
Sbjct: 250 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 309

Query: 449 FVLEAV---------------QVFQAIRNCKCEL--------------------RIETYN 473
            + EAV               QV+ AI +   E                      I TYN
Sbjct: 310 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN 369

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI GLC   ++  A ++ + L +   IPD V+ +T+I   C  G +DKA DL   M   
Sbjct: 370 LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKY 429

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
               +  T+  L+ G     + +++  L  KM    +V S+ ++ + +V+  SK
Sbjct: 430 GIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNIMVEAYSK 482



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 175/358 (48%), Gaps = 3/358 (0%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           S N  S   +  F   +K   + G  + +ILL  L K+ +      + + L + GL P  
Sbjct: 131 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 190

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            + N LIN  C+ G   GAF   G++      P+ +T+N LINGLC   RI  A  L  +
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +     +P V TFNTLI+   RT        +  EM  E G   KP+VV+Y SI++  CK
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM-QENG--LKPNVVSYGSIVNAFCK 307

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +G + +A  +L  M  +++ PN   YN++I  +       +A  L  +M  NG+ P +VT
Sbjct: 308 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 367

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I   C   ++ +   ++  +    + PD V+YN+L+   C  G I +A +L   M 
Sbjct: 368 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 427

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
             G +  V +Y+ LI+      ++ +   LY++M+   + PS   +N ++    + GN
Sbjct: 428 KYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 485



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 156/309 (50%), Gaps = 1/309 (0%)

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           D    P+  ++N +I    + G+      + + M +R V P+ +TYN+++DG    G + 
Sbjct: 8   DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 67

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
               L   MV  G + +  +YN+L++  C+  ++ +   L  EM S+++ P   TY+ L 
Sbjct: 68  AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 127

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL + G+    L L  K   N V    +T +  ++GLCK+G V  A +V Q++ N    
Sbjct: 128 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 187

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
                YN LING C+ G L+ A   F +++ +   PD +T + +I+ LCK  ++  A DL
Sbjct: 188 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           L++M+     P+  TF TL+  + +  +  K  ++L +M    L  + +S  S +V+   
Sbjct: 248 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS-IVNAFC 306

Query: 587 KDKKYRECL 595
           K+ K  E +
Sbjct: 307 KNGKIPEAV 315



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 3/295 (1%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  M      P   ++  L+  L K ++      L   +  NG+ P +   N LI+   +
Sbjct: 213 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 272

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G     F+VL  +  +   PN V++  ++N  C  G+I EA  +   +      PN   
Sbjct: 273 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 332

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N +I+          A  L E+M +       P +VTYN +I GLC    + +A+E++ 
Sbjct: 333 YNAIIDAYVEHGPNDQAFILVEKMKSNG---ISPSIVTYNLLIKGLCNQSQISEAEEIIN 389

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            + +  + P+ ++YN+LI   C   +  +A  L   M   G++  V T++ +I+     G
Sbjct: 390 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 449

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           +++++  L + M+Q  V P    +N +++ +   G   +A +L   M+ K   HD
Sbjct: 450 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 504


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 244/487 (50%), Gaps = 43/487 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ FF   I     P ++SF ILL   A    ++ V +L + + S G+          
Sbjct: 113 SDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLREMKSRGI---------- 159

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
                                    T N  T   +++ LCA   + +A   F  ++   C
Sbjct: 160 -------------------------TSNGATHGVILSALCARRDLDKAVSYFNSVSPNKC 194

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P + T+  L++GLC+      A  +FEEM+ +     KPD++ Y+S+IDGL K G VD+
Sbjct: 195 EPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKG---YKPDIIAYSSLIDGLSKAGRVDE 251

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++L+  M  R   P  + Y S++ G C     +EA     EM    ++P V T++ ++ 
Sbjct: 252 ARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVT 311

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                GK++K   ++E M  R   PDT++Y   ++    +GR   A ++F +MV KGC+ 
Sbjct: 312 GYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKP 371

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+++Y I+I+  CK+  +  A  + R M    ++P+   Y  ++ G  +   L +AL+L 
Sbjct: 372 DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELY 431

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR--IETYNCLINGLC 480
            ++  + ++P + T+ T I+ LCK   + EA+++ + ++  K EL   I TY+ +I+GL 
Sbjct: 432 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLG 491

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K+G  + A  L   +   G IPD  T +++I  L   G++ +A +LL +M      P + 
Sbjct: 492 KVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDH 551

Query: 541 TFCTLLR 547
           T+ TL++
Sbjct: 552 TYGTLVQ 558



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 233/486 (47%), Gaps = 45/486 (9%)

Query: 70  DCMIKMKPSPGMTS----FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           + +++   S G+TS      ++L+ L   +  D  VS F  ++ N   P LF   +L++ 
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDG 207

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           LCK      A  V   ++R  + P+ + ++ LI+GL   GR+ EA +L   +      P 
Sbjct: 208 LCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPT 267

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
            V + +++ GLC+      A+K  +EM        +P V TY+ I+ G    G V+KA  
Sbjct: 268 AVAYTSIVAGLCKCGRIQEAVKTIQEMRR---RRLRPRVDTYSFIVTGYIGMGKVEKAFA 324

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           ++ +M DR+  P+ I+Y   I     +   +EA+ +F  M++ G +PD+ T+  +I+  C
Sbjct: 325 VMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFC 384

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           K+G M     +L LM +  V P+   Y  +MDGF    R+  A EL+  ++  G      
Sbjct: 385 KEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTV 444

Query: 366 SYNILINANCKDQKVEDAVCLYREML--SERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           +YN +INA CK +K+++A+ L REM    E + PS++TY+ ++ GL +VG    A  L+ 
Sbjct: 445 TYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLA 504

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M  N V+PD FT+ + I  L   G V  A++                            
Sbjct: 505 EMIDNGVIPDCFTYTSLIQTLAGAGKVSRAME---------------------------- 536

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
                  L   +   G  PD  T  T++  LC+   +D A DLL +M      P+E TF 
Sbjct: 537 -------LLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFK 588

Query: 544 TLLRGF 549
            + +GF
Sbjct: 589 AVEKGF 594



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 198/424 (46%), Gaps = 8/424 (1%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R  F+    T N L+  L   G + +A   F+       +PNV +FN L+ G     +  
Sbjct: 89  RPGFSHTLFTRNSLLLALVRGGHLSDALGFFQS---SISEPNVSSFNILLRGFAARDDFE 145

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           V   L  EM +        +  T+  I+  LC    +DKA      +      P + TY 
Sbjct: 146 VVNALLREMKSRG---ITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYT 202

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            L+ G C     + A  +F EM+  G +PD++ ++++I+   K G++D+  +L++LM+ R
Sbjct: 203 VLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVAR 262

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G  P  V Y S++ G C  GRI  A +    M  +  R  V +Y+ ++       KVE A
Sbjct: 263 GPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKA 322

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             +  EM      P  I+Y   +  L+ +G   +A K+ + M      PD  T+   ID 
Sbjct: 323 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDN 382

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK G +  A  V + +     +     Y  +++G  K  RL+ A +L+ R+   G +P 
Sbjct: 383 FCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPS 442

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAK--NCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            VT +T+I+ LCK  +MD+A +LL +M+ +     PS VT+  ++ G  +   + +   L
Sbjct: 443 TVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDL 502

Query: 562 LHKM 565
           L +M
Sbjct: 503 LAEM 506



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 187/419 (44%), Gaps = 41/419 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV +F+ +   K  P + ++T+L+  L K  + +    +F+ +   G  PD+   + L
Sbjct: 180 DKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSL 239

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           I+ L K G    A  ++  ++     P  V +  ++ GLC  GRI EA +  +++     
Sbjct: 240 IDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRL 299

Query: 178 ---------------------NVFA---------CDPNVVTFNTLINGLCRTRNTLVALK 207
                                  FA         C P+ +++   I  L        A K
Sbjct: 300 RPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEK 359

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +FE MV +    CKPD+ TY  IID  CK+G +  A  +L  M    + PN   Y  ++ 
Sbjct: 360 VFETMVEKG---CKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMD 416

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG--V 325
           GF      +EA  L+  ++ +G+ P  VT+N +IN  CK  KMD+   LL  M +R   +
Sbjct: 417 GFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL 476

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P  VTY+ ++ G   VG   RA +L   M+  G   D ++Y  LI       KV  A+ 
Sbjct: 477 EPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAME 536

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
           L  EML   I P   TY TL+  L +  ++  A  L+ +M  N   P+ FTF     G 
Sbjct: 537 LLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 170/369 (46%), Gaps = 8/369 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + +  ++   K+G +  +EA    D M+   P P   ++T ++  L K  +    V 
Sbjct: 232 DIIAYSSLIDGLSKAGRV--DEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVK 289

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
             + +    L P +   + ++     MG    AF V+  +      P+T+++   I  L 
Sbjct: 290 TIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALY 349

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
           + GR  EA ++F+ +    C P++ T+  +I+  C+  +   A  +   M     A  KP
Sbjct: 350 SIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDK---AAVKP 406

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +   Y  I+DG  K   +++A EL  ++    I P+ +TYN++I   C +    EA  L 
Sbjct: 407 NRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELL 466

Query: 283 IEMM--DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            EM      ++P +VT++ +I+   K G  ++   LL  MI  GV PD  TY SL+    
Sbjct: 467 REMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLA 526

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G++SRA EL   M+  G   D ++Y  L+   C+   V+ A  L +EM+     P+  
Sbjct: 527 GAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEF 585

Query: 401 TYNTLLSGL 409
           T+  +  G 
Sbjct: 586 TFKAVEKGF 594



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 2/264 (0%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P   S+T+ +  L    + +    +F+ +   G  PD+    ++I+  CK G  + A  
Sbjct: 335 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 394

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VL  + ++   PN   +  +++G     R+ EA  L++++      P+ VT+NT+IN LC
Sbjct: 395 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 454

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + +    AL+L  EM      + +P +VTY+ II GL K G  ++A +LL +M D  + P
Sbjct: 455 KLKKMDEALELLREMQRRKEEL-EPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIP 513

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +  TY SLI           A  L  EM+  G+ PD  T+  ++   C+   +D    LL
Sbjct: 514 DCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLL 572

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCL 341
           + M++ G  P+  T+ ++  GF L
Sbjct: 573 QEMMRNGHTPNEFTFKAVEKGFRL 596


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 233/489 (47%), Gaps = 32/489 (6%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P   S+ +++  + +  +    V +F  +    + P+    N +I+   K G     F
Sbjct: 59  PPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF 118

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  +++     PN +T+N L++GLC  GR+ E + L  ++      P+  T++ L +GL
Sbjct: 119 RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 178

Query: 197 CRTRNTLVALKLFEEMVNE------------FGAICK--------------------PDV 224
            R  ++   L LF + +                 +CK                    P  
Sbjct: 179 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 238

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           V YN++I+G C+ G ++ A     QMK R+I P+ ITYN+LI G C  +    A+ L +E
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 298

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M DNGV P V TFN +I+   + G+++K   +L  M + G+ P+ V+Y S+++ FC  G+
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 358

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           I  A  +   M  K    +   YN +I+A  +    + A  L  +M S  I PS++TYN 
Sbjct: 359 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 418

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ GL     + +A ++I+ +  + ++PD+ ++ T I   C  G + +A+ + Q +    
Sbjct: 419 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 478

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +  + TY+ LI+GL   GRL     L+ ++     +P     + M+    K G   KA 
Sbjct: 479 IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAE 538

Query: 525 DLLLDMEAK 533
           DL  +M  K
Sbjct: 539 DLRKEMLQK 547



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 250/528 (47%), Gaps = 40/528 (7%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR-SCFTPNTVTF 154
           ++  V   F  L S G  PD F  N  +      G    A  +L R+ R     PN  ++
Sbjct: 7   RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 66

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N +I G+   GR  +A  +F ++   A  PN +T+NT+I+G  +  +     +L ++MV 
Sbjct: 67  NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 126

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                 KP+ +TYN ++ GLC+ G + +   LL +M  + + P+  TY+ L  G     D
Sbjct: 127 HG---LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 183

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
            K    LF + + NGV     T + ++N  CKDGK+     +L+ ++  G+ P  V YN+
Sbjct: 184 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 243

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++G+C  G +  A   F  M S+  + D  +YN LIN  CK +++ +A  L  EM    
Sbjct: 244 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 303

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           + P+V T+NTL+    + G L     ++ +MQ N + P+  ++ + ++  CKNG + EAV
Sbjct: 304 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 363

Query: 455 ---------------QVFQAIRNCKCEL--------------------RIETYNCLINGL 479
                          QV+ AI +   E                      I TYN LI GL
Sbjct: 364 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 423

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C   ++  A ++ + L +   IPD V+ +T+I   C  G +DKA DL   M       + 
Sbjct: 424 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 483

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            T+  L+ G     + +++  L  KM    +V S+ ++ + +V+  SK
Sbjct: 484 RTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNIMVEAYSK 530



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 204/413 (49%), Gaps = 2/413 (0%)

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
           L + GR  +  R F  L      P+   +N  +       +   A+ +   M  +     
Sbjct: 2   LLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRD--GAP 59

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            P+  +YN +I G+ + G    A E+  +M +R + PN ITYN++I G     D +    
Sbjct: 60  PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 119

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L  +M+ +G++P+ +T+N +++  C+ G+M + + LL+ M  + + PD  TY+ L DG  
Sbjct: 120 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 179

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G       LF   +  G     Y+ +IL+N  CKD KV  A  + + +++  + P+ +
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 239

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            YNTL++G  Q G L  A     +M+   + PD  T+   I+GLCK   +  A  +   +
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 299

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           ++      +ET+N LI+   + G+L+    +   +Q  G  P+VV+  ++++  CK G++
Sbjct: 300 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 359

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
            +A  +L DM  K+ +P+   +  ++  +V++    +  +L+ KM +  +  S
Sbjct: 360 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 412



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 175/358 (48%), Gaps = 3/358 (0%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           S N  S   +  F   +K   + G  + +ILL  L K+ +      + + L + GL P  
Sbjct: 179 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 238

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            + N LIN  C+ G   GAF   G++      P+ +T+N LINGLC   RI  A  L  +
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 298

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +     +P V TFNTLI+   RT        +  EM  E G   KP+VV+Y SI++  CK
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM-QENG--LKPNVVSYGSIVNAFCK 355

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +G + +A  +L  M  +++ PN   YN++I  +       +A  L  +M  NG+ P +VT
Sbjct: 356 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 415

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I   C   ++ +   ++  +    + PD V+YN+L+   C  G I +A +L   M 
Sbjct: 416 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 475

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
             G +  V +Y+ LI+      ++ +   LY++M+   + PS   +N ++    + GN
Sbjct: 476 KYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 533



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 3/295 (1%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  M      P   ++  L+  L K ++      L   +  NG+ P +   N LI+   +
Sbjct: 261 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 320

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G     F+VL  +  +   PN V++  ++N  C  G+I EA  +   +      PN   
Sbjct: 321 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 380

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N +I+          A  L E+M +       P +VTYN +I GLC    + +A+E++ 
Sbjct: 381 YNAIIDAYVEHGPNDQAFILVEKMKSNG---ISPSIVTYNLLIKGLCNQSQISEAEEIIN 437

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            + +  + P+ ++YN+LI   C   +  +A  L   M   G++  V T++ +I+     G
Sbjct: 438 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 497

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           +++++  L + M+Q  V P    +N +++ +   G   +A +L   M+ K   HD
Sbjct: 498 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 552


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 259/505 (51%), Gaps = 4/505 (0%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           +  +  L+    +  Q D    +   +   G+ P++      I   C+      AF +  
Sbjct: 204 VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYE 263

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            ++R+    + VT + L+ GLC +GR  EA  LF++++     PN VT+ TLI+ L +  
Sbjct: 264 GMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAG 323

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
                L L  EMV+  G +   D+VTY +++D L K G  D+ K+ L      N++ N +
Sbjct: 324 RGKELLSLLGEMVSR-GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGV 380

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY  LI   C   +  EA+ + +EM +  + P+VVTF+++IN   K G +DK      +M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            +RG+NP+ VTY +L+DGF        A E++  M+ +G   + +  + L+N   ++ K+
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKI 500

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           E+A+ L+++     +    + Y TL+ GLF+ G++  A K   ++   +++PD+  +  +
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I+ LC  G   EA  +   +RN   +    TYN +I   C+ G    A KL H ++    
Sbjct: 561 INCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P+++T +T++  L   G ++KA  LL +M +    PS +T   +L+   Q +++  V++
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ-SRRLDVIL 679

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLL 585
            +H+      + +D+++ + ++ +L
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 245/565 (43%), Gaps = 67/565 (11%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++T L+  L K  + D V    +   S+ L  +     +LI+ LCK      A  VL 
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLL 403

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            +     +PN VTF+ +ING    G + +A    + +     +PNVVT+ TLI+G  + +
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463

Query: 201 NTLVALKLFEEM------VNEF--------------------------GAICKPDVVTYN 228
               AL+++ +M      VN+F                          G+    D V Y 
Sbjct: 464 GQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           ++IDGL K G +  A +   ++ DRN+ P+ + YN  I   C +  +KEAK +  EM + 
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNM 583

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G++PD  T+N MI  +C+ G+  K  +LL  M    + P+ +TYN+L+ G    G + +A
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643

Query: 349 RELFVSMVS-----------------------------------KGCRHDVYSYNILINA 373
           + L   MVS                                    G   D+  YN L+  
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C       A  +  EML   I P  IT+N L+ G  +  +L +A     +M   ++ P+
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
             TF T + GL   G + EA  V   +     E    TY+ L+ G  K      A +L+ 
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYC 823

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
            +  KG +P V T + +I    K G M +A +L  DM+ +   P+  T+  L+ G+ +  
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIR 883

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLS 578
             ++V   L  M  +    S  +LS
Sbjct: 884 NGTEVKKCLKDMKEKGFSPSKGTLS 908



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 240/514 (46%), Gaps = 3/514 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M K+   P   ++  L+  LAK  +   ++SL   + S G+  DL     L
Sbjct: 291 SEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ L K G T      L   L    + N VT+  LI+ LC    + EA ++  ++   + 
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVVTF+++ING  + R  L     ++ M+ E G    P+VVTY ++IDG  K    D 
Sbjct: 411 SPNVVTFSSVINGFVK-RGLLDKATEYKRMMKERG--INPNVVTYGTLIDGFFKFQGQDA 467

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+   M    +  N    +SL+ G       +EA  LF +   +G+  D V +  +I+
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K G M    +  + ++ R + PD V YN  ++  C++G+   A+ +   M + G + 
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKP 587

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  +YN +I ++C+  +   A+ L  EM    I+P++ITYNTL++GLF  G +  A  L+
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M      P S T    +    ++  +   + + + + N      I  YN L+  LC  
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G  + A  +   +   G  PD +T + +I   CK   +D A      M  +N  P+  TF
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            TLL G     +  +   +L +M    L  ++L+
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLT 801



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 239/526 (45%), Gaps = 34/526 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+ N+   E V     M +   SP + +F+ ++    K    D      + +   G+ P+
Sbjct: 391 KAHNVDEAEQVLLE--MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI+   K      A  V   +L      N    + L+NGL   G+I EA  LFK
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFK 508

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN--------------------- 214
             +      + V + TLI+GL +  +   A K  +E+++                     
Sbjct: 509 DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILG 568

Query: 215 ---EFGAIC--------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
              E  +I         KPD  TYN++I   C+ G   KA +LL +MK  +I PN+ITYN
Sbjct: 569 KFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYN 628

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +L+ G       ++AK L  EM+  G  P  +T   ++    +  ++D +  + E M+  
Sbjct: 629 TLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G++ D   YN+L+   C  G   +A  +   M+  G   D  ++N LI  +CK   +++A
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNA 748

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
              Y +ML + I P++ T+NTLL GL  VG +G+A  ++ +M+ + + P++ T+   + G
Sbjct: 749 FATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTG 808

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             K    +EA++++  +       ++ TYN LI+   K G +  A +LF  +Q +G  P 
Sbjct: 809 HGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPT 868

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
             T   ++    +     +    L DM+ K   PS+ T   + R F
Sbjct: 869 SCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAF 914



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 235/523 (44%), Gaps = 79/523 (15%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P     N+L+  L      + A  VL  + +     + VT N L+ GLC  G++  AA L
Sbjct: 101 PTTVAYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 174 FKKLN-VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
             +   + A D  V+ +NTLI G CR  +T  AL + + M  +   +   DVV YN+++ 
Sbjct: 158 ADRGGGIHALD--VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPM---DVVGYNTLVA 212

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
           G C+ G VD A+ +L  MK+  ++PNV TY   I  +C     +EA  L+  M+ NGV  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           DVVT +A++   C+DG+  +   L   M + G  P+ VTY +L+D     GR      L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 353 VSMVSKGCRHDV-----------------------------------YSYNILINANCKD 377
             MVS+G   D+                                    +Y +LI+A CK 
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKA 392

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             V++A  +  EM  + I P+V+T++++++G  + G L  A +    M+   + P+  T+
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 438 ATYIDG-----------------LC------------------KNGFVLEAVQVFQAIRN 462
            T IDG                 LC                  +NG + EA+ +F+    
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
               L    Y  LI+GL K G + TA K    L  +  +PD V  +  I+ LC  G+  +
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKE 572

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           A  +L +M      P + T+ T++    +  + +K + LLH+M
Sbjct: 573 AKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 204/423 (48%), Gaps = 22/423 (5%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP----DVVTYNSIIDGLCKDGF 239
           P  V +N L+  L    +   A  +  EM       CK     D VT N+++ GLC++G 
Sbjct: 101 PTTVAYNILLAALSDHAH---APAVLAEM-------CKRGVPFDGVTVNTLLAGLCRNGQ 150

Query: 240 VDKAKELLLQMKDRNINP---NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           VD A  L     DR       +VI +N+LI G+C V D   A  +   M   G+  DVV 
Sbjct: 151 VDAAAAL----ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVG 206

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N ++   C+ G++D    +L++M + GV+P+  TY   +  +C    +  A +L+  MV
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G   DV + + L+   C+D +  +A  L+REM      P+ +TY TL+  L + G   
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGK 326

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           + L L+ +M    VV D  T+   +D L K G   E     +   +    L   TY  LI
Sbjct: 327 ELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLI 386

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           + LCK   +  A ++   ++ K   P+VVT S++I+   K G +DKA +    M+ +   
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           P+ VT+ TL+ GF +   +   + + H M  E + V+   + S +V+ L ++ K  E + 
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDS-LVNGLRQNGKIEEAMA 505

Query: 597 QFR 599
            F+
Sbjct: 506 LFK 508



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 211/461 (45%), Gaps = 22/461 (4%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D   LN L+   C++ +   A      +LRS   P TV +N L+  L        A  + 
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIA----LLRSS-RPTTVAYNILLAALSDHA---HAPAVL 123

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            ++       + VT NTL+ GLCR      A  L     +  G I   DV+ +N++I G 
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL----ADRGGGIHALDVIGWNTLIAGY 179

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           C+ G    A  +  +M  + +  +V+ YN+L+ GFC       A+ +   M + GV P+V
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            T+   I Y C+   +++   L E M++ GV  D VT ++L+ G C  GR S A  LF  
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG- 413
           M   G   +  +Y  LI++  K  + ++ + L  EM+S  +   ++TY  L+  L + G 
Sbjct: 300 MDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359

Query: 414 --NLGDALK--LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
              + D L+  L D + LN V     T+   ID LCK   V EA QV   +        +
Sbjct: 360 TDEVKDTLRFALSDNLSLNGV-----TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            T++ +ING  K G L  A +    ++ +G  P+VVT  T+I    K    D A ++  D
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           M  +    ++    +L+ G  QN K  + + L    +   L
Sbjct: 475 MLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGL 515



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 191/451 (42%), Gaps = 35/451 (7%)

Query: 43  DGTSIAKFLNDRHKSG---NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDT 99
           +G  + KF+ D   +G   N    EA+  F        S    ++T L+  L K     T
Sbjct: 478 EGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
                + L    + PD  V N+ INCLC +G    A  +L  +      P+  T+N +I 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIV 597

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---- 215
             C +G   +A +L  ++ + +  PN++T+NTL+ GL  T     A  L  EMV+     
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657

Query: 216 ----------------------------FGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
                                         A    D+  YN+++  LC  G   KA  +L
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M    I P+ IT+N+LI G C       A   + +M+   + P++ TFN ++      
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G++ +   +L  M + G+ P+ +TY+ L+ G         A  L+  MV KG    V +Y
Sbjct: 778 GRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTY 837

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N LI+   K   +  A  L+++M    + P+  TY+ L+SG  ++ N  +  K +  M+ 
Sbjct: 838 NALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
               P   T +       K G   +A ++ +
Sbjct: 898 KGFSPSKGTLSFICRAFSKPGMTWQAQRLLK 928


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 216/411 (52%), Gaps = 7/411 (1%)

Query: 159 NGLCAEGRIMEAARLFKKLNVF----ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           NGL  +    +A  L  KL  F       P+V T++T +   C+ R+   A K+FEEM  
Sbjct: 214 NGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRR 273

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
                C  + VTYN +I GLC+ G V++A     +M D  ++P+  TY +L+ G C    
Sbjct: 274 R---DCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGR 330

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
            KEAK L  EM  +G++P+VV +  +++   K+GK  +   +L  MI  GV P+ + Y++
Sbjct: 331 LKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDN 390

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L+ G C +G++ RA +L   M+  G R D ++Y+ L+  + +    + A  L  EM +  
Sbjct: 391 LIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSG 450

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I P+  TY  +++GL Q G   +A  L+++M    + P++F +A  I G  K G +  A 
Sbjct: 451 ILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLAC 510

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           +  + +        +  YN LI GL  +GR++ A + + ++Q +G +PD  T S +IH  
Sbjct: 511 ESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 570

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           CK   ++KA+ LL  M      P+  T+  LL G+ ++N   KV  +L  M
Sbjct: 571 CKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM 621



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/558 (27%), Positives = 246/558 (44%), Gaps = 72/558 (12%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++ ++++ L ++   +      + +   GL PD F    L+N LCK G    A  +L  +
Sbjct: 282 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEM 341

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
             S   PN V +  L++G   EG+  EA  +  ++      PN + ++ LI GLC+    
Sbjct: 342 SCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQL 401

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A KL  EM+       +PD  TY+ ++ G  +    D A ELL +M++  I PN  TY
Sbjct: 402 GRASKLLNEMIK---VGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTY 458

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             +I G C   + KEA  L  EM+  G++P+   +  +I  + K+G +      LE M +
Sbjct: 459 GIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTK 518

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
             V PD   YNSL+ G   VGRI  A E +  +  +G   D ++Y+ LI+  CK + +E 
Sbjct: 519 ANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEK 578

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVG----------------------------- 413
           A  L ++ML+  ++P+  TY  LL G F+                               
Sbjct: 579 ADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIR 638

Query: 414 ------NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
                 N+  A  ++ +++ N +VPD   +++ I GLCK   + +AV +   +     E 
Sbjct: 639 NLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEP 698

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            I  YN LI+G C+ G +  A  +F  +  KG +P+ VT + +I   CK G +  A DL 
Sbjct: 699 GIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLY 758

Query: 528 LDMEAKNCVPSEVT----------------------------------FCTLLRGFVQNN 553
            DM  +   P                                      F TL+RGF +  
Sbjct: 759 KDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRG 818

Query: 554 KKSKVVVLLHKMAAEKLV 571
           +  +   LLH M   ++V
Sbjct: 819 RLQETEKLLHVMMDREIV 836



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 241/540 (44%), Gaps = 73/540 (13%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +++  L    K + +D    +F+ +       +    N++I+ LC+ G    AF  
Sbjct: 243 PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 302

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              ++    +P+  T+  L+NGLC  GR+ EA  L  +++     PNVV + TL++G  +
Sbjct: 303 KEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMK 362

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV------------------ 240
                 A  +  EM++   A  +P+ + Y+++I GLCK G +                  
Sbjct: 363 EGKAAEAFDILNEMIS---AGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419

Query: 241 -----------------DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
                            D A ELL +M++  I PN  TY  +I G C   + KEA  L  
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM+  G++P+   +  +I  + K+G +      LE M +  V PD   YNSL+ G   VG
Sbjct: 480 EMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVG 539

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           RI  A E +  +  +G   D ++Y+ LI+  CK + +E A  L ++ML+  ++P+  TY 
Sbjct: 540 RIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYT 599

Query: 404 TLLSGLFQVG-----------------------------------NLGDALKLIDKMQLN 428
            LL G F+                                     N+  A  ++ +++ N
Sbjct: 600 DLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 659

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            +VPD   +++ I GLCK   + +AV +   +     E  I  YN LI+G C+ G +  A
Sbjct: 660 GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA 719

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             +F  +  KG +P+ VT + +I   CK G +  A DL  DM  +   P    +  L  G
Sbjct: 720 RNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG 779



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 238/520 (45%), Gaps = 38/520 (7%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +L+    KN    T   +   +   GL P     N L+  L +       + + G +  +
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGA 239

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
              P+  T++  +   C       A ++F+++    C  N VT+N +I+GLCR+     A
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
               EEMV+ +G    PD  TY ++++GLCK G + +AK LL +M    + PNV+ Y +L
Sbjct: 300 FGFKEEMVD-YG--LSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + GF       EA  +  EM+  GVQP+ + ++ +I   CK G++ + ++LL  MI+ G 
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            PDT TY+ LM G         A EL   M + G   + Y+Y I+IN  C++ + ++A  
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGN 476

Query: 386 LYREMLSERIRPSVIT-----------------------------------YNTLLSGLF 410
           L  EM+SE ++P+                                      YN+L+ GL 
Sbjct: 477 LLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLS 536

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
            VG + +A +   ++Q   +VPD FT++  I G CK   + +A Q+ Q + N   +   +
Sbjct: 537 TVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNAD 596

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  L+ G  K    +    +   +   G  PD      +I  L +   M+ A  +L ++
Sbjct: 597 TYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV 656

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           E    VP    + +L+ G  +     K V LL +MA E L
Sbjct: 657 EKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGL 696



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 143/569 (25%), Positives = 249/569 (43%), Gaps = 76/569 (13%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +SG +   EA  F + M+    SP   ++  L+  L K  +     +L   ++ +GL P+
Sbjct: 292 RSGAV--EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPN 349

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           + V   L++   K G  + AF +L  ++ +   PN + ++ LI GLC  G++  A++L  
Sbjct: 350 VVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLN 409

Query: 176 KL-------NVFACDP----------------------------NVVTFNTLINGLCRTR 200
           ++       + F   P                            N  T+  +INGLC+  
Sbjct: 410 EMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNG 469

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            +  A  L EEM++E     KP+   Y  +I G  K+G +  A E L  M   N+ P++ 
Sbjct: 470 ESKEAGNLLEEMISEG---LKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLF 526

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            YNSLI G   V   +EA+  + ++   G+ PD  T++ +I+  CK   ++K ++LL+ M
Sbjct: 527 CYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQM 586

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI----------- 369
           +  G+ P+  TY  L++G+       +   +  SM+  G + D + Y I           
Sbjct: 587 LNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENM 646

Query: 370 ------------------------LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
                                   LI+  CK   +E AV L  EM  E + P ++ YN L
Sbjct: 647 EVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNAL 706

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + G  + G++  A  + D +    ++P+  T+   IDG CKNG + +A  +++ + +   
Sbjct: 707 IDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGI 766

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                 YN L  G      L+ A  L   + ++G    V   ST++   CK G++ +   
Sbjct: 767 APDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YAHVSLFSTLVRGFCKRGRLQETEK 825

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           LL  M  +  VP+  T   ++  F +  K
Sbjct: 826 LLHVMMDREIVPNAQTVENVITEFGKAGK 854



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 228/481 (47%), Gaps = 42/481 (8%)

Query: 69  FDCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           F+ + +M+ S   P   ++ I++  L +N +     +L + + S GL P+ F+   LI  
Sbjct: 440 FELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 499

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
             K G  S A   L  + ++   P+   +N LI GL   GRI EA   + ++      P+
Sbjct: 500 HSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPD 559

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
             T++ LI+G C+TRN   A +L ++M+N   +  KP+  TY  +++G  K    +K   
Sbjct: 560 EFTYSGLIHGYCKTRNLEKADQLLQQMLN---SGLKPNADTYTDLLEGYFKSNDHEKVSS 616

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           +L  M      P+   Y  +I      ++ + A  +  E+  NG+ PD+  ++++I+  C
Sbjct: 617 ILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC 676

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           K   M+K   LL+ M + G+ P  V YN+L+DGFC  G ISRAR +F S+++KG   +  
Sbjct: 677 KMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCV 736

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y  LI+ NCK+  + DA  LY++ML   I P    YN L +G     +L  AL L ++M
Sbjct: 737 TYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM 796

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
                                 G+                   +  ++ L+ G CK GRL
Sbjct: 797 -------------------FNRGYA-----------------HVSLFSTLVRGFCKRGRL 820

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           +   KL H +  +  +P+  T   +I    K G++ +A+ +  +++ K    S     +L
Sbjct: 821 QETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSL 880

Query: 546 L 546
           L
Sbjct: 881 L 881



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 99/198 (50%)

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           ++L++   K+  V  A  +   M    + P+    N LL  L +   +    KL   M+ 
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + PD +T++T+++  CK      A +VF+ +R   C +   TYN +I+GLC+ G ++ 
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A      +   G  PD  T   +++ LCK G++ +A  LL +M      P+ V + TL+ 
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358

Query: 548 GFVQNNKKSKVVVLLHKM 565
           GF++  K ++   +L++M
Sbjct: 359 GFMKEGKAAEAFDILNEM 376


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 247/485 (50%), Gaps = 23/485 (4%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           L S G  P     N +++ +CK+G    A  ++  + R    P+ +++N LI+G C  G 
Sbjct: 47  LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106

Query: 167 IMEAARLFKKLNV---FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI---C 220
           I  A+ + + L     F C P++V+FN+L NG  +       +K+ +E+    G +   C
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK-------MKMLDEVFVYMGVMLKCC 159

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            P+VVTY++ ID  CK G +  A +    MK   ++PNV+T+  LI G+C   D + A  
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L+ EM    +  +VVT+ A+I+  CK G+M +   +   M++  V P+++ Y +++DGF 
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G    A +    M+++G R D+ +Y ++I+  C + K+++A  +  +M    + P ++
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            + T+++  F+ G +  A+ +  K+      PD    +T IDG+ KNG + EA+  F   
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--- 396

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
             C  +     Y  LI+ LCK G      +LF ++   G +PD    ++ I  LCK+G +
Sbjct: 397 --CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
             A  L   M  +  +   + + TL+ G       SK +++  +   ++++ S +S  S 
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLA-----SKGLMVEARQVFDEMLNSGISPDSA 509

Query: 581 VVDLL 585
           V DLL
Sbjct: 510 VFDLL 514



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 218/459 (47%), Gaps = 37/459 (8%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF---PDLFVLNLLINCLCKMGITSGA 135
           P + S+  L+    +N    +   + + L ++  F   PD+   N L N   KM +    
Sbjct: 89  PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV 148

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
           FV +G +L+ C +PN VT++  I+  C  G +  A + F  +   A  PNVVTF  LI+G
Sbjct: 149 FVYMGVMLKCC-SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            C+  +  VA+ L++EM     ++   +VVTY ++IDG CK G + +A+E+  +M +  +
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSL---NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PN + Y ++I GF    D   A     +M++ G++ D+  +  +I+  C +GK+ +   
Sbjct: 265 EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATE 324

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS--------- 366
           ++E M +  + PD V + ++M+ +   GR+  A  ++  ++ +G   DV +         
Sbjct: 325 IVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIA 384

Query: 367 ---------------------YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
                                Y +LI+A CK+    +   L+ ++    + P    Y + 
Sbjct: 385 KNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW 444

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           ++GL + GNL DA KL  +M    ++ D   + T I GL   G ++EA QVF  + N   
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI 504

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
                 ++ LI    K G +  A  L   +Q +G +  V
Sbjct: 505 SPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 178/371 (47%), Gaps = 8/371 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + +++  +    K+ +    +  F  +  + L P++     LI+  CK G    A  
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   + R   + N VT+  LI+G C +G +  A  ++ ++     +PN + + T+I+G  
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  ++  A+K   +M+N+     + D+  Y  II GLC +G + +A E++  M+  ++ P
Sbjct: 280 QRGDSDNAMKFLAKMLNQG---MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +++ + +++  +      K A  ++ ++++ G +PDVV  + MI+   K+G++ +   ++
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA--IV 394

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
              I++    + V Y  L+D  C  G       LF  +   G   D + Y   I   CK 
Sbjct: 395 YFCIEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
             + DA  L   M+ E +   ++ Y TL+ GL   G + +A ++ D+M  + + PDS  F
Sbjct: 452 GNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511

Query: 438 ATYIDGLCKNG 448
              I    K G
Sbjct: 512 DLLIRAYEKEG 522



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 8/199 (4%)

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           LIN+NC    ++        ++S    P   ++N+++S + ++G +  A  ++  M    
Sbjct: 31  LINSNCGILSLK----FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFG 86

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK---CELRIETYNCLINGLCKMGRLK 486
             PD  ++ + IDG C+NG +  A  V +++R      C+  I ++N L NG  KM  L 
Sbjct: 87  CEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLD 146

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
               ++  +  K   P+VVT ST I   CK G++  A      M+     P+ VTF  L+
Sbjct: 147 EVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLI 205

Query: 547 RGFVQNNKKSKVVVLLHKM 565
            G+ +       V L  +M
Sbjct: 206 DGYCKAGDLEVAVSLYKEM 224


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 247/494 (50%), Gaps = 15/494 (3%)

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
             L +RL   GL P     N +   L ++ +          + R     N  + N L+  
Sbjct: 213 AELLRRLRQYGLSPSPESCNAV---LSRLPLDEAIA-----LFRELPDKNVCSHNILLKA 264

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
           L + GR+ +A + F ++   +  P+VVT+ T+++G C       A+KL +EM  +     
Sbjct: 265 LLSAGRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKG---L 318

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           + +   Y S+I  LC  G V  A  +L  M    +  + + + ++I GFC   D   A+ 
Sbjct: 319 ESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARR 378

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF EM   G+  D VT  A+IN  C+ G++ + +R+L+ M+ +G++ D VTY  L+DG+C
Sbjct: 379 LFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYC 438

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G +  A  +   MV +    +V +Y  L +  CK   V  A  L  EM ++ +  +V 
Sbjct: 439 KRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVY 498

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYN+L++GL + GNL  A++++ +M+      D +T+ T ID LCK+G    A  + Q +
Sbjct: 499 TYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEM 558

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            +   +  I TYN L+NG C  GR++   KL   +  K   P+VVT ++++   C +  M
Sbjct: 559 LDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNM 618

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
               ++   M ++   P+E T+  L++G  +  +  K  +  H+   EK +    S  S 
Sbjct: 619 KSTTEIYKGMHSQEVAPNENTYNILIKGHCK-ARNMKEALYFHQEMIEKGLRLTASSYSA 677

Query: 581 VVDLLSKDKKYREC 594
           ++ LL+K KK+ E 
Sbjct: 678 LIRLLNKKKKFSEA 691



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 205/398 (51%), Gaps = 3/398 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV   D M         T +T ++ +L    Q    + + + +  +G+  D  V   +I+
Sbjct: 306 AVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVIS 365

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C  G  + A  +   + +     + VT   LINGLC  G + EA R+ +++     D 
Sbjct: 366 GFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDV 425

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +VVT+  LI+G C+  N + A ++  EMV   G    P+VVTY ++ DGLCK G V  A 
Sbjct: 426 DVVTYTVLIDGYCKRGNMVEAFRVHNEMV---GRRVAPNVVTYTALSDGLCKQGDVRAAN 482

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           ELL +M ++ +  NV TYNSLI G C   + ++A  +  EM   G + DV T+  +I+  
Sbjct: 483 ELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTL 542

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK G+ D+ + +L+ M+ +G+ P   TYN LM+GFC+ GR+   ++L   M+ K  R +V
Sbjct: 543 CKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNV 602

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN L+   C D+ ++    +Y+ M S+ + P+  TYN L+ G  +  N+ +AL    +
Sbjct: 603 VTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQE 662

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           M    +   + +++  I  L K     EA   F  +RN
Sbjct: 663 MIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRN 700



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 218/445 (48%), Gaps = 8/445 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   FD   +M   P + ++  ++       + +  V L   + + GL  +  V   +I
Sbjct: 273 DACQHFD---EMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVI 329

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC  G  S A  VL  +       + V F  +I+G C++G +  A RLF+++      
Sbjct: 330 ALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLA 389

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            + VT   LINGLCR      A ++ +EMV++   +   DVVTY  +IDG CK G + +A
Sbjct: 390 ADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDV---DVVTYTVLIDGYCKRGNMVEA 446

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  +M  R + PNV+TY +L  G C   D + A  L  EM + G++ +V T+N++IN 
Sbjct: 447 FRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLING 506

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G +++  R++  M   G   D  TY +L+D  C  G   RA  +   M+ KG +  
Sbjct: 507 LCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPS 566

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +YN+L+N  C   +VE    L   ML + +RP+V+TYN+L+       N+    ++  
Sbjct: 567 IATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYK 626

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M   +V P+  T+   I G CK   + EA+   Q +      L   +Y+ LI  L K  
Sbjct: 627 GMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKK 686

Query: 484 RLKTACKLFHRLQHKG--PIPDVVT 506
           +   A   F +++++G    PDV +
Sbjct: 687 KFSEARVFFDKMRNEGLTAEPDVYS 711



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 226/461 (49%), Gaps = 10/461 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F    +  P   + S  ILL  L    +       F  ++S    PD+     +
Sbjct: 241 DEAIALF----RELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTM 293

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C  G    A  +L  +       N   +  +I  LC +G++ +A R+ + + +   
Sbjct: 294 VHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGV 353

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + V F T+I+G C   +   A +LFEEM     A    D VT+ ++I+GLC+ G + +
Sbjct: 354 ALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAA---DRVTHTALINGLCRAGELKE 410

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +L +M D+ ++ +V+TY  LI G+C   +  EA  +  EM+   V P+VVT+ A+ +
Sbjct: 411 ADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSD 470

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G +   N LL  M  +G+  +  TYNSL++G C  G + +A  +   M + G R 
Sbjct: 471 GLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRT 530

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DVY+Y  LI+  CK  + + A  + +EML + I+PS+ TYN L++G    G +    KL+
Sbjct: 531 DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLL 590

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M   +V P+  T+ + +   C +  +    ++++ + + +      TYN LI G CK 
Sbjct: 591 EWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKA 650

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +K A      +  KG      + S +I  L K+ +  +A
Sbjct: 651 RNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 191/359 (53%), Gaps = 3/359 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           FT +++             LF+ +   GL  D      LIN LC+ G    A  VL  ++
Sbjct: 360 FTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMV 419

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                 + VT+  LI+G C  G ++EA R+  ++      PNVVT+  L +GLC+  +  
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A +L  EM N+   +   +V TYNS+I+GLCK G +++A  ++ +M+      +V TY 
Sbjct: 480 AANELLHEMCNKGLEL---NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYT 536

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI   C   ++  A  +  EM+D G++P + T+N ++N  C  G+++   +LLE M+++
Sbjct: 537 TLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEK 596

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            V P+ VTYNSLM  +C+   +    E++  M S+    +  +YNILI  +CK + +++A
Sbjct: 597 NVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEA 656

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           +  ++EM+ + +R +  +Y+ L+  L +     +A    DKM+   +  +   ++ Y+D
Sbjct: 657 LYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMD 715



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 174/361 (48%), Gaps = 3/361 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A   F+ M K   +    + T L+  L +  +      + + +   GL  D+    +LI+
Sbjct: 376 ARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLID 435

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G    AF V   ++     PN VT+  L +GLC +G +  A  L  ++     + 
Sbjct: 436 GYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL 495

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           NV T+N+LINGLC+  N   A+++  EM     A  + DV TY ++ID LCK G  D+A 
Sbjct: 496 NVYTYNSLINGLCKFGNLEQAMRIMTEME---AAGHRTDVYTYTTLIDTLCKSGEFDRAH 552

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            +L +M D+ I P++ TYN L+ GFC     +  K L   M++  V+P+VVT+N+++   
Sbjct: 553 NMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQY 612

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C D  M     + + M  + V P+  TYN L+ G C    +  A      M+ KG R   
Sbjct: 613 CIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTA 672

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            SY+ LI    K +K  +A   + +M +E +      Y+  +   F   NL   + L D+
Sbjct: 673 SSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDE 732

Query: 425 M 425
           +
Sbjct: 733 L 733



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 5/282 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+   EA    + M+  + +P + ++T L   L K         L   + + GL  +
Sbjct: 439 KRGNMV--EAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELN 496

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N LIN LCK G    A  ++  +  +    +  T+  LI+ LC  G    A  + +
Sbjct: 497 VYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQ 556

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P++ T+N L+NG C +       KL E M+ +     +P+VVTYNS++   C
Sbjct: 557 EMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN---VRPNVVTYNSLMKQYC 613

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            D  +    E+   M  + + PN  TYN LI G C   + KEA     EM++ G++    
Sbjct: 614 IDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTAS 673

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           +++A+I    K  K  +     + M   G+  +   Y+  MD
Sbjct: 674 SYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMD 715


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 236/485 (48%), Gaps = 23/485 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+Y F    +++  P + +   +L  L K ++      LF  +   GL P +   N L
Sbjct: 136 DEALYVFR---RLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTL 192

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN     G  + A  V  +++     PN VT+  +I  LC EG I +A RLF  +     
Sbjct: 193 INACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGM 252

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN  T+N L++G C+  +   A+ L++E++    +   P+ V + ++IDG CK     +
Sbjct: 253 QPNQYTYNVLMSGHCQRDDVNSAVVLYQELLK---SGLNPNAVIFTTLIDGFCKAKRFSE 309

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK + L+M    + P V  YNSL+ G     + +EA  L+ EM   G+ PD  T + ++ 
Sbjct: 310 AKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVR 369

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C  G+M   +R L+ + + GVN +   YN+L+D +C +G +  A      M   G   
Sbjct: 370 GLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEP 429

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V SY+ LI+ + K  K++ A+ +Y EM+++ I P+V+TY  L+ G  + G +  A +L 
Sbjct: 430 NVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLH 489

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE--------LRIET--- 471
            +M  N + P++ T +  +DGLC+   V EAV+        KC           IE    
Sbjct: 490 KEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECL 549

Query: 472 ------YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                 Y  LI GL   G+   A KLF  ++  G IPD  T + +I   C  G +  A  
Sbjct: 550 IPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMM 609

Query: 526 LLLDM 530
           L  DM
Sbjct: 610 LYADM 614



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 209/414 (50%), Gaps = 20/414 (4%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T  +A   +D M+  +  P + ++T ++  L +         LF  +   G+ P+ +  N
Sbjct: 201 TVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYN 260

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           +L++  C+    + A V+   +L+S   PN V F  LI+G C   R  EA  +F ++  F
Sbjct: 261 VLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRF 320

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P V  +N+L++G  R+ N   AL L++EM      +C PD  T + ++ GLC  G +
Sbjct: 321 GVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRL--GLC-PDEFTCSIVVRGLCDGGQM 377

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
             A   L  +++  +N N   YN+LI  +C + + +EA      M + G++P+VV+++++
Sbjct: 378 HVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSL 437

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+ + K GKM     +   M+ +G+ P+ VTY +L+ G    G I  A  L   M+  G 
Sbjct: 438 IDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGI 497

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYRE-----------------MLSERIRPSVITYN 403
             +  + ++L++  C++ +V++AV    E                 +  E + P+ + Y 
Sbjct: 498 SPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYM 557

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           TL+ GL+  G   +A KL   M+ + ++PDSFT+   I G C  G+VL A+ ++
Sbjct: 558 TLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLY 611



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 224/472 (47%), Gaps = 25/472 (5%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
            L +L+  L +MG+   A  V  R LR+   P     N +++GL    R   A  LF ++
Sbjct: 121 ALGVLVIALSQMGLLDEALYVFRR-LRTL--PALPACNAVLDGLVKARRPGCAWELFDEM 177

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLV-ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
                 P+VVT+NTLIN  CR + T+  A +++++MV +      P+VVTY ++I  LC+
Sbjct: 178 LRRGLVPSVVTYNTLINA-CRFQGTVAKAQEVWDQMVAQ---QIDPNVVTYTTMICALCE 233

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +G +  A+ L   MK+  + PN  TYN L+ G C  DD   A  L+ E++ +G+ P+ V 
Sbjct: 234 EGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVI 293

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           F  +I+  CK  +  +   +   M + GV P    YNSLMDG    G    A  L+  M 
Sbjct: 294 FTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMT 353

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G   D ++ +I++   C   ++  A    + +  + +  +   YN L+    ++GNL 
Sbjct: 354 RLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLE 413

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +AL    +M    + P+  ++++ IDG  K G +  A+ ++  +     E  + TY  LI
Sbjct: 414 EALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALI 473

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC- 535
           +G  K G +  A +L   +   G  P+ +T S ++  LC+E ++ +A   +++     C 
Sbjct: 474 HGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCS 533

Query: 536 ----------------VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
                           +P+ V + TL+ G   + +  +   L   M    ++
Sbjct: 534 DIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMI 585



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 187/374 (50%), Gaps = 1/374 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P +   N+++DGL K      A EL  +M  R + P+V+TYN+LI          +A+ +
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           + +M+   + P+VVT+  MI   C++G +    RL + M + G+ P+  TYN LM G C 
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
              ++ A  L+  ++  G   +   +  LI+  CK ++  +A  ++ EM    + P+V  
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN+L+ G F+ GN  +AL L  +M    + PD FT +  + GLC  G +  A +  Q ++
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQ 388

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                L    YN LI+  C++G L+ A     R+   G  P+VV+ S++I    K G+M 
Sbjct: 389 EDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQ 448

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A  +  +M AK   P+ VT+  L+ G  +N         LHK   E  +  +    S +
Sbjct: 449 IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGID-AAFRLHKEMIENGISPNAITVSVL 507

Query: 582 VDLLSKDKKYRECL 595
           VD L ++ + +E +
Sbjct: 508 VDGLCRENRVQEAV 521



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 148/355 (41%), Gaps = 55/355 (15%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N AV  +  ++K   +P    FT L+    K K++     +F  +   G+ P + V N L
Sbjct: 273 NSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSL 332

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++   + G    A  +   + R    P+  T + ++ GLC  G++  A R  + +     
Sbjct: 333 MDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGV 392

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + N   +N LI+  CR  N   AL     M  E G   +P+VV+Y+S+IDG  K G +  
Sbjct: 393 NLNAAAYNALIDEYCRIGNLEEALATCTRM-TEVG--IEPNVVSYSSLIDGHSKRGKMQI 449

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +  +M  + I PNV+TY +LI G         A  L  EM++NG+ P+ +T + +++
Sbjct: 450 AMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVD 509

Query: 303 YNCK----------------------------------------------------DGKM 310
             C+                                                    DG+ 
Sbjct: 510 GLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQH 569

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
            +  +L   M + G+ PD+ TY  L+ G C++G +  A  L+  M+  G +   Y
Sbjct: 570 CEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTRY 624



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 19/185 (10%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           S +  ++   K G +    A+Y    M+     P + ++T L+   AKN   D    L K
Sbjct: 433 SYSSLIDGHSKRGKMQIAMAIY--TEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHK 490

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGA--FVVLGRILR---------------SCFT 148
            +  NG+ P+   +++L++ LC+      A  FV+    L+                C  
Sbjct: 491 EMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLI 550

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN+V +  LI GL  +G+  EA +LF  +      P+  T+  LI G C     L A+ L
Sbjct: 551 PNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMML 610

Query: 209 FEEMV 213
           + +M+
Sbjct: 611 YADMM 615


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 235/478 (49%), Gaps = 7/478 (1%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +   G+ PD     L+    C+MG  S     L  ++R  F  +  T   +I+  C
Sbjct: 218 VFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFC 277

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            +G        F K       PN++ F +LINGLC+  +   A ++ EEMV +     KP
Sbjct: 278 EKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGW---KP 334

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           +V T+ ++IDGLCK G+ +KA  L L++ +  +  PNV TY S+I G+C  D    A+ L
Sbjct: 335 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEML 394

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              M + G+ P+  T+  +I+ + K G  +K   L++LM + G + +  TYN+ +D  C 
Sbjct: 395 LSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCK 454

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            GR   A +L       G + D  +Y ILI+  C+     +A+  + +M    ++P + T
Sbjct: 455 KGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHT 514

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YNTL++   +   + ++ KL  +     +VP   T+ + I G C++  V  A++ F  + 
Sbjct: 515 YNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMS 574

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +  C     TY  LI+GLCK  +L  AC+L+  +  KG  P  VT  T+ +  CK+    
Sbjct: 575 DHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSA 634

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            A  +L  ++ K  +    T  TL+R      K    V+  HK+  +   V  ++L++
Sbjct: 635 TAMVILERLDKKLWIR---TVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTA 689



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 235/501 (46%), Gaps = 11/501 (2%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD M      P   S+ ++     +  +        K +   G   D     L+I+  C+
Sbjct: 219 FDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCE 278

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G  S  F    + +     PN + F  LINGLC  G I +A  + +++      PNV T
Sbjct: 279 KGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYT 338

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
              LI+GLC+   T  A +LF ++V       KP+V TY S+I G CK+  +++A+ LL 
Sbjct: 339 HTALIDGLCKKGWTEKAFRLFLKLVRSDDY--KPNVHTYTSMIHGYCKEDKLNRAEMLLS 396

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK++ + PN  TY  LI G     ++++A  L   M   G   ++ T+NA I+  CK G
Sbjct: 397 RMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKG 456

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +  +  +LL+   + G+  DTVTY  L+   C       A   F  M   G + D+++YN
Sbjct: 457 RFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYN 516

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI A  + +++E++  L+ E +   + P+  TY +++ G  +  N+  ALK  ++M  +
Sbjct: 517 TLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDH 576

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN---CKCELRIETYNCLINGLCKMGRL 485
              PDS T+   I GLCK   + EA Q+++A+ +     CE+   T   L    CK    
Sbjct: 577 GCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEV---TRLTLAYEYCKQDDS 633

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
            TA  +  RL  K  I    T +T+I  LC E ++  A      +  K+     VT    
Sbjct: 634 ATAMVILERLDKKLWIR---TVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAF 690

Query: 546 LRGFVQNNKKSKVVVLLHKMA 566
                ++NK + V  L  +++
Sbjct: 691 TTACYESNKYALVSDLSERIS 711



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 202/447 (45%), Gaps = 44/447 (9%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++   ++FD  +++   P + +FT L+  L K         + + +   G  P+++    
Sbjct: 282 ASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTA 341

Query: 122 LINCLCKMGITSGAFVVLGRILRS-CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           LI+ LCK G T  AF +  +++RS  + PN  T+  +I+G C E ++  A  L  ++   
Sbjct: 342 LIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQ 401

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-FGAICKPDVVTYNSIIDGLCKDGF 239
              PN  T+  LI+G  +  N   A +L + M  E F A    ++ TYN+ ID LCK G 
Sbjct: 402 GLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSA----NIFTYNAFIDSLCKKGR 457

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
             +A +LL +     +  + +TY  LI   C   D +EA   F +M   GVQPD+ T+N 
Sbjct: 458 FLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNT 517

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I    +  +M++  +L    +  G+ P   TY S++ G+C    +S A + F  M   G
Sbjct: 518 LIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHG 577

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  D  +Y  LI+  CK+ K+++A  LY  M+ + + P  +T  TL     +  +   A+
Sbjct: 578 CTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAM 637

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            +++++                                        +L I T N LI  L
Sbjct: 638 VILERLDK--------------------------------------KLWIRTVNTLIRKL 659

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVT 506
           C   ++  A   FH+L  K    D VT
Sbjct: 660 CSERKVGMAVLFFHKLLDKDQNVDRVT 686



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 186/391 (47%), Gaps = 4/391 (1%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A  +F+EM      +C PD V+Y  +    C+ G +      L  M  R    +  T   
Sbjct: 215 AENVFDEM--RVRGVC-PDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTL 271

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           +I  FC           F + ++ G++P+++ F ++IN  CK G + +   +LE M+++G
Sbjct: 272 MISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKG 331

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGCRHDVYSYNILINANCKDQKVEDA 383
             P+  T+ +L+DG C  G   +A  LF+ +V S   + +V++Y  +I+  CK+ K+  A
Sbjct: 332 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRA 391

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L   M  + + P+  TY  L+ G  + GN   A +L+D M       + FT+  +ID 
Sbjct: 392 EMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDS 451

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LCK G  LEA ++ +       +    TY  LI+ LC+    + A   F ++   G  PD
Sbjct: 452 LCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPD 511

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           + T +T+I    ++ +M+++  L  +      VP++ T+ +++ G+ ++   S  +   +
Sbjct: 512 MHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFN 571

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
           +M+        L+  + +  L  + K    C
Sbjct: 572 RMSDHGCTPDSLTYGALISGLCKESKLDEAC 602



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 167/359 (46%), Gaps = 1/359 (0%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V T N +     + G V  A+ +  +M+ R + P+ ++Y  +   +C +    +      
Sbjct: 196 VRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLK 255

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +M+  G   D  T   MI+  C+ G   +V    +  ++ G+ P+ + + SL++G C  G
Sbjct: 256 DMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRG 315

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML-SERIRPSVITY 402
            I +A E+   MV KG + +VY++  LI+  CK    E A  L+ +++ S+  +P+V TY
Sbjct: 316 SIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTY 375

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            +++ G  +   L  A  L+ +M+   +VP++ T+   IDG  K G   +A ++   +  
Sbjct: 376 TSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGK 435

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 I TYN  I+ LCK GR   ACKL  +    G   D VT + +I  LC+     +
Sbjct: 436 EGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTRE 495

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           A      M      P   T+ TL+  F +  +  +   L  +     LV +  + +S +
Sbjct: 496 ALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMI 554



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 135/260 (51%), Gaps = 1/260 (0%)

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           F  +  ++EA  + IEM ++G+   V T N +     + G +     + + M  RGV PD
Sbjct: 171 FAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPD 230

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
           +V+Y  +   +C +GRIS        MV +G   D  +  ++I+  C+          + 
Sbjct: 231 SVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFD 290

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           + +   ++P++I + +L++GL + G++  A +++++M      P+ +T    IDGLCK G
Sbjct: 291 KWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKG 350

Query: 449 FVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           +  +A ++F + +R+   +  + TY  +I+G CK  +L  A  L  R++ +G +P+  T 
Sbjct: 351 WTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTY 410

Query: 508 STMIHWLCKEGQMDKANDLL 527
           + +I    K G  +KA +L+
Sbjct: 411 TCLIDGHSKAGNFEKAYELM 430



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 147/322 (45%), Gaps = 2/322 (0%)

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A+ +F EM   GV PD V++  M    C+ G++   +R L+ M++RG   D  T   ++ 
Sbjct: 215 AENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMIS 274

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC  G  SR    F   V  G + ++ ++  LIN  CK   ++ A  +  EM+ +  +P
Sbjct: 275 TFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKP 334

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           +V T+  L+ GL + G    A +L  K+ + +D  P+  T+ + I G CK   +  A  +
Sbjct: 335 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEML 394

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              ++        +TY CLI+G  K G  + A +L   +  +G   ++ T +  I  LCK
Sbjct: 395 LSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCK 454

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +G+  +A  LL            VT+  L+    +     + +V   KM     V  D+ 
Sbjct: 455 KGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAG-VQPDMH 513

Query: 577 LSSKVVDLLSKDKKYRECLNQF 598
             + ++   S+ ++  E    F
Sbjct: 514 TYNTLIAAFSRQRRMEESEKLF 535



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 8/286 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            ++   K+GN    +A    D M K   S  + ++   +  L K  ++     L K+   
Sbjct: 413 LIDGHSKAGNF--EKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFR 470

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            GL  D     +LI+ LC+   T  A V   ++ ++   P+  T+N LI     + R+ E
Sbjct: 471 LGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEE 530

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           + +LF +       P   T+ ++I G CR RN  +ALK F  M +     C PD +TY +
Sbjct: 531 SEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHG---CTPDSLTYGA 587

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I GLCK+  +D+A +L   M D+ ++P  +T  +L   +C  DD   A  + +E +D  
Sbjct: 588 LISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVI-LERLDKK 646

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           +   + T N +I   C + K+         ++ +  N D VT  + 
Sbjct: 647 LW--IRTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAF 690



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 1/234 (0%)

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           F  +G+   A  + + M + G    V + N +     +   V  A  ++ EM    + P 
Sbjct: 171 FAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPD 230

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
            ++Y  +     ++G + D  + +  M     V D+ T    I   C+ GF       F 
Sbjct: 231 SVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFD 290

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
                  +  +  +  LINGLCK G +K A ++   +  KG  P+V T + +I  LCK+G
Sbjct: 291 KWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKG 350

Query: 519 QMDKANDLLLDM-EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             +KA  L L +  + +  P+  T+ +++ G+ + +K ++  +LL +M  + LV
Sbjct: 351 WTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLV 404


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 247/498 (49%), Gaps = 17/498 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  ++++ ++  L    + +   SLF+ +  NG+ P ++   +LI+  CK G+   A   
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +L    TPN VT+  LI+      ++  A  LF+ + +  C PNVVT+  LI+G C+
Sbjct: 518 FDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCK 577

Query: 199 TRNTLVALKLFEEMVNEFGAI------------CK-PDVVTYNSIIDGLCKDGFVDKAKE 245
                 A +++  M  +  +             C+ P+V+TY +++DGLCK   V +A E
Sbjct: 578 AGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHE 637

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           LL  M      PN I Y+++I GFC +   ++A+ +F +M + G  P++ T+++ I+   
Sbjct: 638 LLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLF 697

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           KD ++D V ++L  M++    P+ V Y  ++DG C +G+   A +L + M  KGC  +V 
Sbjct: 698 KDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVV 757

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y  +I+   K  K+E  + L+R+M S+   P+ ITY  L++     G L +A KL+D+M
Sbjct: 758 TYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEM 817

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +         +    I+G  +    + ++ +   +   +       Y  LI+   K GRL
Sbjct: 818 KQTYWPKHILSHRKIIEGFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRL 875

Query: 486 KTACKLFHRLQH--KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           + A  L   +       + +    +++I  L    ++DKA +L   M +KN VP      
Sbjct: 876 EVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILV 935

Query: 544 TLLRGFVQNNKKSKVVVL 561
            L++G ++ +K  + + L
Sbjct: 936 HLIKGLIKVDKWQEALQL 953



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 267/581 (45%), Gaps = 65/581 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  T++  L+ +  +  + DT   + + + S     D + L+     LCK G    AF +
Sbjct: 209 PSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDL 268

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT---------- 188
           +       F P+TV +N +++GLC      EA  +  ++   +C PNVVT          
Sbjct: 269 IDEA--EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLR 326

Query: 189 -------------------------FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
                                    FN+LI+  C++R+   A KLF++M+      C+P 
Sbjct: 327 KGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIK---CGCQPG 383

Query: 224 VVTYNSIIDGLCKD------GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
            + YN  I  +C +        +D  ++   +M D  +  N +  ++     C    + +
Sbjct: 384 YLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQ 443

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +  EMM  G  PD  T++ +I + C   K++K   L E M + G+ P   TY  L+D
Sbjct: 444 AFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILID 503

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC  G I +AR+ F  M+ KGC  +V +Y  LI+A  K +++  A  L+  ML E  +P
Sbjct: 504 SFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKP 563

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV-----------------PDSFTFATY 440
           +V+TY  L+ G  + G +  A ++  +M+  D+                  P+  T+   
Sbjct: 564 NVVTYTALIDGHCKAGQIEKACQIYARMR-GDIESSDMDKYFKLDHNNCEGPNVITYGAL 622

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           +DGLCK   V EA ++   +    CE     Y+ +I+G CK+G+L+ A ++F ++  +G 
Sbjct: 623 VDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGY 682

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P++ T S+ I  L K+ ++D    +L  M   +C P+ V +  ++ G  +  K  +   
Sbjct: 683 SPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYK 742

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L+ KM  EK    ++   + ++D   K  K  +CL  FR +
Sbjct: 743 LMLKM-EEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDM 782



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 239/512 (46%), Gaps = 60/512 (11%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD    N +++ LC+  +   A  +L R+  S   PN VT+  L++G   +G++    R+
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
              +    C PN   FN+LI+  C++R+   A KLF++M+      C+P  + YN  I  
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIK---CGCQPGYLVYNIFIGS 393

Query: 234 LCKD-----------------------------------------GFVDKAKELLLQMKD 252
           +C +                                         G  D+A +++ +M  
Sbjct: 394 VCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMG 453

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           +   P+  TY+ +I   C     ++A  LF EM  NG+ P V T+  +I+  CK G + +
Sbjct: 454 KGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQ 513

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             +  + M+ +G  P+ VTY +L+  +    ++  A ELF  M+ +GC+ +V +Y  LI+
Sbjct: 514 ARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALID 573

Query: 373 ANCKDQKVEDAVCLYREMLSERIR----------------PSVITYNTLLSGLFQVGNLG 416
            +CK  ++E A  +Y  M  +                   P+VITY  L+ GL +   + 
Sbjct: 574 GHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVK 633

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +L+D M  +   P+   +   IDG CK G + +A +VF  +        + TY+  I
Sbjct: 634 EAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFI 693

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           + L K  RL    K+  ++      P+VV  + M+  LCK G+ D+A  L+L ME K C 
Sbjct: 694 DCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCN 753

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           P+ VT+  ++ GF ++ K  + + L   M ++
Sbjct: 754 PNVVTYTAMIDGFGKSGKIEQCLELFRDMCSK 785



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 250/542 (46%), Gaps = 56/542 (10%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN-CLCKMGITSGAFV 137
           P    +  +++ L +   ++  + +  R+ S+   P++    +L++ CL K  +     +
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +   I   C+ PN   FN LI+  C       A +LFKK+    C P  + +N  I  +C
Sbjct: 337 LSMMITEGCY-PNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVC 395

Query: 198 RTRNTL------VALKLFEEMVN-------------------------EFGAICK----- 221
                       +  K + EM++                          F  IC+     
Sbjct: 396 SNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKG 455

Query: 222 --PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             PD  TY+ +I  LC    V+KA  L  +MK   I P+V TY  LI  FC     ++A+
Sbjct: 456 FVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQAR 515

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
             F EM+  G  P+VVT+ A+I+   K  +M   + L E+M+  G  P+ VTY +L+DG 
Sbjct: 516 KWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGH 575

Query: 340 CLVGRISRARELFVSMVSKGCRHD----------------VYSYNILINANCKDQKVEDA 383
           C  G+I +A +++  M       D                V +Y  L++  CK  +V++A
Sbjct: 576 CKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEA 635

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L   ML+    P+ I Y+ ++ G  ++G L DA ++  KM      P+ +T++++ID 
Sbjct: 636 HELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDC 695

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           L K+  +   ++V   +    C   +  Y  +++GLCK+G+   A KL  +++ KG  P+
Sbjct: 696 LFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPN 755

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           VVT + MI    K G++++  +L  DM +K C P+ +T+  L+     N    +   LL 
Sbjct: 756 VVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLD 815

Query: 564 KM 565
           +M
Sbjct: 816 EM 817



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 232/532 (43%), Gaps = 67/532 (12%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN------------------ 159
           +LN L+   C+ G  + A   LGR+    + P+  T+N LI                   
Sbjct: 178 LLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREM 237

Query: 160 -----------------GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                             LC  G+  EA  L  +   F   P+ V +N +++GLC     
Sbjct: 238 LSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFV--PDTVFYNRMVSGLCEASLF 295

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A+ +   M +   + C P+VVTY  ++ G  + G + + K +L  M      PN   +
Sbjct: 296 EEAMDILHRMRS---SSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIF 352

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK------MDKVNRL 316
           NSLI  +C   D+  A  LF +M+  G QP  + +N  I   C + +      +D V + 
Sbjct: 353 NSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKA 412

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M+  GV  + V  ++     C  G+  +A ++   M+ KG   D  +Y+ +I   C 
Sbjct: 413 YSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCD 472

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             KVE A  L+ EM    I PSV TY  L+    + G +  A K  D+M      P+  T
Sbjct: 473 ASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVT 532

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +   I    K   +  A ++F+ +    C+  + TY  LI+G CK G+++ AC+++ R+ 
Sbjct: 533 YTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM- 591

Query: 497 HKGPI------------------PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            +G I                  P+V+T   ++  LCK  ++ +A++LL  M A  C P+
Sbjct: 592 -RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPN 650

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           ++ +  ++ GF +  K      +  KM +E+    +L   S  +D L KD +
Sbjct: 651 QIVYDAVIDGFCKIGKLQDAQEVFTKM-SERGYSPNLYTYSSFIDCLFKDNR 701



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 235/502 (46%), Gaps = 42/502 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A  +FD M+    +P + ++T L+    K KQ      LF+ +   G  P++     L
Sbjct: 512 QQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTAL 571

Query: 123 INCLCKMGITSGAFVVLGRIL----------------RSCFTPNTVTFNFLINGLCAEGR 166
           I+  CK G    A  +  R+                  +C  PN +T+  L++GLC   R
Sbjct: 572 IDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANR 631

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           + EA  L   +    C+PN + ++ +I+G C+      A ++F +M +E G    P++ T
Sbjct: 632 VKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKM-SERGY--SPNLYT 688

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+S ID L KD  +D   ++L +M + +  PNV+ Y  ++ G C +    EA  L ++M 
Sbjct: 689 YSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKME 748

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           + G  P+VVT+ AMI+   K GK+++   L   M  +G  P+ +TY  L++  C  G + 
Sbjct: 749 EKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLD 808

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A +L   M        + S+  +I      Q+   ++ L  E+      P    Y  L+
Sbjct: 809 EAYKLLDEMKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDELSENESVPVDSLYRILI 866

Query: 407 SGLFQVGNLGDALKLIDKMQL--NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI--RN 462
               + G L  AL L++++    +  V + + +A+ I+ L     V +A++++ ++  +N
Sbjct: 867 DNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKN 926

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE--GQM 520
              EL I  +  LI GL K+ + + A +L   +           C   IHWL ++  G+ 
Sbjct: 927 VVPELSILVH--LIKGLIKVDKWQEALQLSDSI-----------CQMDIHWLQEKATGRT 973

Query: 521 DKANDLLLD--MEAKNCVPSEV 540
           ++   L++   +EA+  V  E+
Sbjct: 974 EEMVKLVIAAMVEAETGVSEEI 995



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 173/376 (46%), Gaps = 9/376 (2%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G+I S++   +F         P + ++  L+  L K  +      L   + ++G  P+  
Sbjct: 593 GDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQI 652

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V + +I+  CK+G    A  V  ++    ++PN  T++  I+ L  + R+    ++  K+
Sbjct: 653 VYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKM 712

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
              +C PNVV +  +++GLC+   T  A KL  +M  E G  C P+VVTY ++IDG  K 
Sbjct: 713 LENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKM-EEKG--CNPNVVTYTAMIDGFGKS 769

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G +++  EL   M  +   PN ITY  LI   CC +   +     ++ M     P  +  
Sbjct: 770 GKIEQCLELFRDMCSKGCAPNFITYRVLI-NHCCSNGLLDEAYKLLDEMKQTYWPKHILS 828

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           +  I        +  +  L EL     V  D++ Y  L+D +   GR+  A +L +  +S
Sbjct: 829 HRKIIEGFSQEFITSIGLLDELSENESVPVDSL-YRILIDNYIKAGRLEVALDL-LEEIS 886

Query: 358 KGCRHDV---YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
               H V   Y Y  LI       KV+ A+ LY  M+S+ + P +     L+ GL +V  
Sbjct: 887 SSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDK 946

Query: 415 LGDALKLIDKMQLNDV 430
             +AL+L D +   D+
Sbjct: 947 WQEALQLSDSICQMDI 962


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 213/418 (50%), Gaps = 33/418 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG  +F  +    AK  + + V  +++ +   G         +LI+CLCK+G    A+ +
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +    F    + ++ +IN LC   R+ EA  L +K+  +A  P+ +T+  ++  LC+
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCK 126

Query: 199 TRNTLVALKLFEEMVNE------------FGAICK--------------------PDVVT 226
           T+    AL   EEM                  +C+                    P+VVT
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN++I+GLCK   ++ A EL  +M  +   P  ++YN+LI GFC   D   AK +F +M+
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +   P+VVT+  +I+   K GK+     +L+ M+++GV P+  TY+ L+DGFC V R+ 
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A +L   MV++G    V +YNIL+N+ C+  K+EDA  L+R M   R  P+V+TYNTLL
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
             L     L  A +L  +M      PD+ T+ T   GL + G V EA ++ + ++  K
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 424



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 217/418 (51%), Gaps = 6/418 (1%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P   TFN + +G    GR+ +   +++ +           +  LI+ LC+  N   A KL
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 209 FEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
              M +  F    K   + Y++II+ LCK   V++A+EL+ +M  R   P+ +TY  ++ 
Sbjct: 68  LHTMRLKRF----KRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVE 122

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
             C      +A     EM   G++PD   +N +++  C++ K+++   L E M+++ +NP
Sbjct: 123 RLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINP 182

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + VTYN+L++G C   RI  A ELF  M  KG      SYN LI+  CK + +  A  ++
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            +M+     P+V+TY TL+ GL + G +  A +++D M    V P+  T++  IDG CK 
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             V EA ++ + +        + TYN L+N LC+  +L+ A KLF  +  +   P VVT 
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +T++  LC   Q+D A+ L  +M AK C P  +T+ TL  G  +  K  +   L+ KM
Sbjct: 363 NTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 212/420 (50%), Gaps = 4/420 (0%)

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
           + P     N + +   K G       V   ++ + +T     +  LI+ LC  G   EA 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
           +L   + +       + ++T+IN LC+      A +L E+M         PD +TY  I+
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR----YAPPDALTYGPIV 121

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
           + LCK   +D A   + +M  R I P+   YN ++ G C  +  +EA+ LF +M+   + 
Sbjct: 122 ERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           P+VVT+N +IN  CK  +++    L + M  +G  P  V+YN+L+DGFC    +  A+++
Sbjct: 182 PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDV 241

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  MV   C  +V +Y  LI+   K  KV+ A  +   M+ + + P+V TY+ L+ G  +
Sbjct: 242 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
           V  + +A KL+++M    + P   T+   ++ LC+   + +A ++F+ +   +C   + T
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 361

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN L+  LC   +L  A +L+  +  KG  PD +T  T+   L + G++ +A +L+  M+
Sbjct: 362 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 180/328 (54%), Gaps = 4/328 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA    + M +  P P   ++  ++  L K K+ D  ++  + + + G+ PD F+ N +
Sbjct: 97  EEARELIEKMARYAP-PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFV 155

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LC+      A ++  ++++    PN VT+N LINGLC   RI  A  LFK++     
Sbjct: 156 LSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGY 215

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P  V++NTLI+G C+ ++ + A  +F++MV    + C P+VVTY ++IDGL K G V  
Sbjct: 216 VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR---SNCVPNVVTYTTLIDGLSKSGKVQA 272

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+L  M  + + PNV TY+ LI GFC V    EA  L  +M+  G+ P VVT+N ++N
Sbjct: 273 AAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLN 332

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C+  K++   +L   M QR  +P  VTYN+L+   C   ++  A  L+  M++KGC  
Sbjct: 333 SLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPP 392

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREM 390
           D  +Y+ L     +  KV +A  L  +M
Sbjct: 393 DAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 159/322 (49%), Gaps = 1/322 (0%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  R + P   T+N++  GF      ++ K ++  M++ G       +  +I+  CK G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
            D+  +LL  M  +      + Y+++++  C + R+  AREL   M ++    D  +Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           ++   CK ++++DA+    EM +  I+P    YN +LSGL Q   + +A  L +KM    
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P+  T+ T I+GLCK   +  A ++F+ +          +YN LI+G CK   L  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +F ++     +P+VVT +T+I  L K G++  A ++L  M  K   P+  T+  L+ GF
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 550 VQNNKKSKVVVLLHKMAAEKLV 571
            +  +  +   LL +M  + + 
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIA 321



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 148/313 (47%), Gaps = 43/313 (13%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC------------------- 360
           M  R V P   T+N++ DGF   GR+ + +E++  MV  G                    
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 361 ----------------RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR---PSVIT 401
                           +    +Y+ +IN  CK  +VE+A    RE++ +  R   P  +T
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEA----RELIEKMARYAPPDALT 116

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y  ++  L +   + DAL  +++M    + PD+F +   + GLC+   V EA  +F+ + 
Sbjct: 117 YGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 176

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
             +    + TYN LINGLCK  R++TA +LF  +  KG +P  V+ +T+I   CK+  + 
Sbjct: 177 KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLV 236

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A D+   M   NCVP+ VT+ TL+ G  ++ K      +L  M  +K V  +++  S +
Sbjct: 237 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM-VKKGVTPNVATYSCL 295

Query: 582 VDLLSKDKKYREC 594
           +D   K ++  E 
Sbjct: 296 IDGFCKVRRVDEA 308



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 2/178 (1%)

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M L  V+P + TF T  DG  K G + +  +V+Q +      LR   Y  LI+ LCK+G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
              A KL H ++ K      +  ST+I+WLCK  ++++A +L+  M A+   P  +T+  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           ++    +  +    +  + +MA  + +  D  + + V+  L +++K  E    F  ++
Sbjct: 120 IVERLCKTKRIDDALATVEEMAT-RGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 176



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 55/122 (45%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    + M+    +P + ++ ILL  L +  + +    LF+ +      P +   N L
Sbjct: 306 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 365

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC      GA  +   ++     P+ +T++ L  GL   G++ EA  L +K+ +   
Sbjct: 366 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKR 425

Query: 183 DP 184
           +P
Sbjct: 426 NP 427


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 250/490 (51%), Gaps = 4/490 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M++   SP + ++++L+    K +  DTV+ L   + + G+ P+++   + I
Sbjct: 196 EAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICI 255

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L +      A+ +LG++  S   P+ VT   +I  LC  GR+ +A  +F K+      
Sbjct: 256 RVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQK 315

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++    + ++   ++++  MV +       ++V+Y +++D LC+ G +D+A
Sbjct: 316 PDRVTYITLLDKCGDSGDSQSVMEIWNAMVADG---YNDNIVSYTAVVDALCQVGRLDEA 372

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  +MK++ I+P   +YNSLI GF   D +  A  LF  M   G  P+  T    INY
Sbjct: 373 LAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINY 432

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G+  K  +  E M  +G+ PD    N+++      GR+  A+ +F  +   G   D
Sbjct: 433 YGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPD 492

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y ++I    K  K ++A+  + +M+     P V+  N+L+  L++ G   +A KL  
Sbjct: 493 TITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFH 552

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +++   + P + T+ T + GL + G V E + + + + +      + TYN +++ L K G
Sbjct: 553 QLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNG 612

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A  + + +  KG  PD+ + +T+++ L KE + ++A  +   M+ K   P   T C
Sbjct: 613 EVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMK-KILAPDYATLC 671

Query: 544 TLLRGFVQNN 553
           T+L  FV+N 
Sbjct: 672 TILPSFVKNG 681



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 142/589 (24%), Positives = 271/589 (46%), Gaps = 43/589 (7%)

Query: 51   LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
            L+   +SG +   + V++   +  M  SP   ++T+++   +K  + D  ++ F  +   
Sbjct: 465  LSSLARSGRLGMAKRVFYE--LKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVET 522

Query: 111  GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
            G  PD+  LN LI+ L K G  + A+ +  ++      P   T+N L++GL  EG++ E 
Sbjct: 523  GCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEV 582

Query: 171  ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
              L +++      PN++T+NT+++ L +      A+ +   M  +    C PD+ +YN++
Sbjct: 583  MHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKG---CTPDLSSYNTV 639

Query: 231  IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA------------ 278
            + GL K+   ++A  +  QMK + + P+  T  +++  F      KEA            
Sbjct: 640  MYGLIKEERFEEAFRMFCQMK-KILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAD 698

Query: 279  ----KCLFIEMMDN-----GVQPDV----------VTFN-----AMINYNCKDGKMDKVN 314
                K  F  +M+      GV+  +          +  N      +I + CK  K  + +
Sbjct: 699  CNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAH 758

Query: 315  RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            +L       GV+  T +YNSL+ G      I  A +LF  M   GC  D ++YN++++A 
Sbjct: 759  QLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAM 818

Query: 375  CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
             K  ++E+ + +  EM  +    + +TYNT++SGL +   L  A+ L   +      P  
Sbjct: 819  GKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP 878

Query: 435  FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             T+   +DGL K G +++A  +F  +    C+     YN L+NG    G  +  C++F +
Sbjct: 879  CTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEK 938

Query: 495  LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            +  +G  PD+ + + +I  LC  G+++        +      P  + +  L+ G  ++ +
Sbjct: 939  MVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSER 998

Query: 555  KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
              + V L ++M  +K +V +L   + ++  L K  K  E    +  LL 
Sbjct: 999  IEEAVCLFNEM-KKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLI 1046



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 145/561 (25%), Positives = 266/561 (47%), Gaps = 8/561 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           +G +   F+N   KSG   S +A+  ++ M      P + +   +L+ LA++ +      
Sbjct: 422 NGYTHVLFINYYGKSGQ--SLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKR 479

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  L   G+ PD     ++I C  K      A      ++ +   P+ +  N LI+ L 
Sbjct: 480 VFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLY 539

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G+  EA +LF +L     +P   T+NTL++GL R       + L EEM +   +I  P
Sbjct: 540 KGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTH---SIHPP 596

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +++TYN+++D L K+G V+ A  +L  M ++   P++ +YN+++ G    + ++EA  +F
Sbjct: 597 NLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMF 656

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKM-DKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
            + M   + PD  T   ++    K+G M + ++ + E +++   N D  +++SLM+G   
Sbjct: 657 CQ-MKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILN 715

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
              + ++ E   ++ S+G   + +    LI   CK +K  +A  L+ +     +     +
Sbjct: 716 KAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGS 775

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN+L+ GL     +  A  L  +M+     PD FT+   +D + K+  + E ++V   + 
Sbjct: 776 YNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMH 835

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               E    TYN +I+GL K  RL+ A  L++ L  +G  P   T   ++  L K G+M 
Sbjct: 836 RKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMV 895

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A +L  +M    C P+   +  LL G         V  +  KM  E+ +  D+   + +
Sbjct: 896 DAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKM-VEQGINPDIKSYTVL 954

Query: 582 VDLLSKDKKYRECLNQFRHLL 602
           +D L    +  + L+ FR LL
Sbjct: 955 IDTLCTAGRLNDGLSYFRQLL 975



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 155/625 (24%), Positives = 272/625 (43%), Gaps = 69/625 (11%)

Query: 24  CSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPG--M 81
           C    PP P               A+    R  +G  T  E+V     M++  P P   +
Sbjct: 51  CRQSAPPAP---------------ARVHERRRAAGAGTGTESVVH---MLRSAPGPAEAL 92

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF-VLNLLINCLCK------------ 128
             FT            ++   + + + ++G   D+  V +L+   + K            
Sbjct: 93  ELFTAAARQPTAVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSG 152

Query: 129 MGITSG---AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           +G+  G   A V L  +  +  + N  T+N LI  L   G   EA  ++K +      P+
Sbjct: 153 VGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPS 212

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEM---------------VNEFGAI----------- 219
           V T++ L+    + R+    L L  EM               +   G             
Sbjct: 213 VRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILG 272

Query: 220 ------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
                 CKPDVVT+  +I  LC  G +  AK++  +MK  +  P+ +TY +L+       
Sbjct: 273 KMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSG 332

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           D +    ++  M+ +G   ++V++ A+++  C+ G++D+   + + M ++G++P+  +YN
Sbjct: 333 DSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYN 392

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           SL+ GF       RA ELF  M + G   + Y++ + IN   K  +   A+  Y  M S+
Sbjct: 393 SLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSK 452

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            I P V   N +LS L + G LG A ++  +++   V PD+ T+   I    K     EA
Sbjct: 453 GIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEA 512

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           +  F  +    C   +   N LI+ L K G+   A KLFH+L+     P   T +T++  
Sbjct: 513 MNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSG 572

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           L +EG++ +   LL +M      P+ +T+ T+L    +N + +  + +L+ M  EK    
Sbjct: 573 LGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSM-TEKGCTP 631

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQF 598
           DLS  + V+  L K++++ E    F
Sbjct: 632 DLSSYNTVMYGLIKEERFEEAFRMF 656



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 213/441 (48%), Gaps = 8/441 (1%)

Query: 82   TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            +SF  L+  +      +  +   + + S G+  + F L  LI  LCK      A  +  +
Sbjct: 704  SSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNK 763

Query: 142  ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
                  +  T ++N LI GL  E  I  A  LF ++    C P+  T+N +++ + ++  
Sbjct: 764  FKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMR 823

Query: 202  TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
                L++  EM  +     +   VTYN+II GL K   +++A +L   +     +P   T
Sbjct: 824  IEEMLRVQAEMHRKG---YESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCT 880

Query: 262  YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
            Y  L+ G        +A+ LF EM++ G +P+   +N ++N +   G  + V ++ E M+
Sbjct: 881  YGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMV 940

Query: 322  QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            ++G+NPD  +Y  L+D  C  GR++     F  ++  G   D+  YN+LI+   K +++E
Sbjct: 941  EQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIE 1000

Query: 382  DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            +AVCL+ EM  + I P++ TYN+L+  L + G   +A ++ +++ +    P+ FT+   I
Sbjct: 1001 EAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALI 1060

Query: 442  DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
             G   +G    A   +  +      + +     LI+GL     +  A  LF  ++ +G  
Sbjct: 1061 RGYSVSGSTDNAYAAYDCV-----AVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCG 1115

Query: 502  PDVVTCSTMIHWLCKEGQMDK 522
            PD  T + ++  + K  ++++
Sbjct: 1116 PDQFTYNLILDAIGKSMRIEE 1136



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 142/574 (24%), Positives = 248/574 (43%), Gaps = 49/574 (8%)

Query: 11   SLASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFD 70
            S ASKA    NF+            + +    D  ++   ++  +K G    NEA   F 
Sbjct: 504  SKASKADEAMNFFSDM---------VETGCVPDVLALNSLIDTLYKGGK--GNEAWKLFH 552

Query: 71   CMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG 130
             + +MK  P   ++  LL+ L +  +   V+ L + +  +   P+L   N +++CL K G
Sbjct: 553  QLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNG 612

Query: 131  ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
              + A  +L  +     TP+  ++N ++ GL  E R  EA R+F ++      P+  T  
Sbjct: 613  EVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILA-PDYATLC 671

Query: 191  TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
            T++    +      AL   +E +    A C  D  +++S+++G+     V+K+ E    +
Sbjct: 672  TILPSFVKNGLMKEALHTVKEYI--LKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENI 729

Query: 251  KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
              R I  N      LI   C      EA  LF +    GV     ++N++I     +  +
Sbjct: 730  ASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLI 789

Query: 311  DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
            D    L   M + G  PD  TYN ++D      RI     +   M  KG      +YN +
Sbjct: 790  DIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTI 849

Query: 371  INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL----------- 419
            I+   K +++E A+ LY  ++SE   P+  TY  LL GL + G + DA            
Sbjct: 850  ISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGC 909

Query: 420  ------------------------KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
                                    ++ +KM    + PD  ++   ID LC  G + + + 
Sbjct: 910  KPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLS 969

Query: 456  VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
             F+ +     E  +  YN LI+GL K  R++ A  LF+ ++ KG +P++ T +++I  L 
Sbjct: 970  YFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLG 1029

Query: 516  KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            K G+  +A  +  ++  K   P+  T+  L+RG+
Sbjct: 1030 KAGKASEAAQMYEELLIKGWKPNVFTYNALIRGY 1063



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 229/489 (46%), Gaps = 45/489 (9%)

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT---RNTLVALK 207
           T + N+++  + A GR+ + A++F  +       NV TF T+ +G+      R+  VAL 
Sbjct: 108 TESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALP 167

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +  E      A    +  TYN +I  L K GF  +A E+   M +  I+P+V TY+ L+ 
Sbjct: 168 VMRE------AGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMV 221

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            F    D      L  EM   GV+P+V ++   I    +  + D+  ++L  M   G  P
Sbjct: 222 SFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKP 281

Query: 328 DTVTYNSLMDGFCLVGRISRARELFV---------------------------------- 353
           D VT+  ++   C  GR+S A+++F                                   
Sbjct: 282 DVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIW 341

Query: 354 -SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
            +MV+ G   ++ SY  +++A C+  ++++A+ ++ EM  + I P   +YN+L+SG  + 
Sbjct: 342 NAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKA 401

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
                AL+L + M      P+ +T   +I+   K+G  L+A+Q ++ +++      +   
Sbjct: 402 DMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAA 461

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N +++ L + GRL  A ++F+ L+  G  PD +T + MI    K  + D+A +   DM  
Sbjct: 462 NAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVE 521

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
             CVP  +   +L+    +  K ++   L H++   K+  ++ + ++ ++  L ++ K +
Sbjct: 522 TGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNT-LLSGLGREGKVK 580

Query: 593 ECLNQFRHL 601
           E ++    +
Sbjct: 581 EVMHLLEEM 589



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 244/554 (44%), Gaps = 23/554 (4%)

Query: 57   SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
            S N   N A+     M +   +P ++S+  ++  L K ++++    +F ++    L PD 
Sbjct: 609  SKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDY 667

Query: 117  FVLNLLINCLCKMGITSGAF-VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
              L  ++    K G+   A   V   IL++    +  +F+ L+ G+  +  + ++    +
Sbjct: 668  ATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAE 727

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF-GAICKPDVVTYNSIIDGL 234
             +       N      LI  LC+ +  L A +LF    N+F G        +YNS+I GL
Sbjct: 728  NIASRGILLNDFFLCPLIRHLCKHKKALEAHQLF----NKFKGLGVSLKTGSYNSLIRGL 783

Query: 235  CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
              +  +D A++L  +MK     P+  TYN ++         +E   +  EM   G +   
Sbjct: 784  VDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTY 843

Query: 295  VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            VT+N +I+   K  ++++   L   ++  G +P   TY  L+DG    G++  A  LF  
Sbjct: 844  VTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNE 903

Query: 355  MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
            M+  GC+ +   YNIL+N +      E+   ++ +M+ + I P + +Y  L+  L   G 
Sbjct: 904  MLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGR 963

Query: 415  LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
            L D L    ++    + PD   +   IDGL K+  + EAV +F  ++       + TYN 
Sbjct: 964  LNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNS 1023

Query: 475  LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
            LI  L K G+   A +++  L  KG  P+V T + +I      G  D A        A +
Sbjct: 1024 LILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNA------YAAYD 1077

Query: 535  CVPSEVTFCT-LLRGFVQNNKKSKVVVLLHKMAAE---------KLVVSDLSLSSKVVDL 584
            CV   V+  T L+ G V  N  +    L  +M             L++  +  S ++ ++
Sbjct: 1078 CVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEM 1137

Query: 585  LSKDKKYRECLNQF 598
            L   ++  E LNQ 
Sbjct: 1138 LKVQEEIAEDLNQL 1151



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 126/576 (21%), Positives = 256/576 (44%), Gaps = 39/576 (6%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S   +  ++ M+    +  + S+T ++  L +  + D  +++F  +   G+ P+ +  N 
Sbjct: 334 SQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNS 393

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+   K  +   A  +   +     +PN  T    IN     G+ ++A + ++ +    
Sbjct: 394 LISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKG 453

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+V   N +++ L R+    +A ++F E+  + G    PD +TY  +I    K    D
Sbjct: 454 IVPDVAAANAVLSSLARSGRLGMAKRVFYEL-KDMG--VSPDTITYTMMIKCCSKASKAD 510

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A      M +    P+V+  NSLI          EA  LF ++ +  ++P   T+N ++
Sbjct: 511 EAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLL 570

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   ++GK+ +V  LLE M      P+ +TYN+++D     G ++ A  +  SM  KGC 
Sbjct: 571 SGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCT 630

Query: 362 HDVYSYNILINANCKDQKVEDA---VCLYREMLSE------RIRPSVI------------ 400
            D+ SYN ++    K+++ E+A    C  +++L+        I PS +            
Sbjct: 631 PDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTV 690

Query: 401 --------------TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
                         ++++L+ G+     +  +++  + +    ++ + F     I  LCK
Sbjct: 691 KEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCK 750

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           +   LEA Q+F   +     L+  +YN LI GL     +  A  LF  ++  G  PD  T
Sbjct: 751 HKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFT 810

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            + ++  + K  ++++   +  +M  K    + VT+ T++ G V++ +  + + L + + 
Sbjct: 811 YNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLM 870

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +E    +  +    ++D L K  K  +  N F  +L
Sbjct: 871 SEGFSPTPCTYGP-LLDGLLKAGKMVDAENLFNEML 905


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 263/532 (49%), Gaps = 19/532 (3%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F+ MI+    P + +  I+L +L  ++  +   ++++ +  +G+ P +   N +++   K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNV 186
            G       +   + R     + VT+N LING    G++ EA R    +  + FA  P  
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP-- 308

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
            +FN LI G C+      A  + +EM+N   A   P   TYN  I  LC  G +D A+EL
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLN---AGIYPTTSTYNIYICALCDFGRIDDAREL 365

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L  M      P+V++YN+L+ G+  +  + EA  LF ++    + P +VT+N +I+  C+
Sbjct: 366 LSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCE 421

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G ++   RL E M  + + PD +TY +L+ GF   G +S A E++  M+ KG + D Y+
Sbjct: 422 SGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYA 481

Query: 367 YNILINANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           Y        +    + A  L+ EM++ +   P +  YN  + GL +VGNL  A++   K+
Sbjct: 482 YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 541

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
               +VPD  T+ T I G  +NG    A  ++  +   +    + TY  LI G  K GRL
Sbjct: 542 FRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRL 601

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A +    ++ +G  P+V+T + +++ +CK G +D+A   L  ME +   P++ ++  L
Sbjct: 602 EQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661

Query: 546 LRGFVQNN---KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
               +  N   +K + VV L+K   +K +  D      +   L KD + RE 
Sbjct: 662 ----ISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV 709



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 219/489 (44%), Gaps = 35/489 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   ++ MI+    P + +F  +L    K    + V  ++  +    +       N+L
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           IN   K G    A    G + RS F     +FN LI G C +G   +A  +  ++     
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339

Query: 178 -------NVFAC-------------------DPNVVTFNTLINGLCRTRNTLVALKLFEE 211
                  N++ C                    P+VV++NTL++G  +    + A  LF++
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDD 399

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           +    G I  P +VTYN++IDGLC+ G ++ A+ L  +M  + I P+VITY +L+ GF  
Sbjct: 400 L--RAGDI-HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN-PDTV 330
             +   A  ++ EM+  G++PD   +        + G  DK  RL E M+    + PD  
Sbjct: 457 NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLT 516

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
            YN  +DG C VG + +A E    +   G   D  +Y  +I    ++ + + A  LY EM
Sbjct: 517 IYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM 576

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           L +R+ PSVITY  L+ G  + G L  A +   +M+   V P+  T    + G+CK G +
Sbjct: 577 LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI 636

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            EA +    +          +Y  LI+  C   + +   KL+  +  K   PD  T   +
Sbjct: 637 DEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696

Query: 511 IHWLCKEGQ 519
              L K+ +
Sbjct: 697 FKHLEKDHE 705



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 169/372 (45%), Gaps = 10/372 (2%)

Query: 24  CSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTS 83
           C FGR  + +  LSS    D  S    ++   K G     EA   FD +      P + +
Sbjct: 354 CDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFV--EASLLFDDLRAGDIHPSIVT 411

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  L+  L ++   +    L + + +  +FPD+     L+    K G  S A  V   +L
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD---PNVVTFNTLINGLCRTR 200
           R    P+   +     G    G   +A RL +++   A D   P++  +N  I+GLC+  
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM--VATDHHAPDLTIYNVRIDGLCKVG 529

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           N + A++ F+  +   G +  PD VTY ++I G  ++G    A+ L  +M  + + P+VI
Sbjct: 530 NLVKAIE-FQRKIFRVGLV--PDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY  LI G       ++A     EM   GV+P+V+T NA++   CK G +D+  R L  M
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            + G+ P+  +Y  L+   C   +     +L+  M+ K    D Y++  L     KD + 
Sbjct: 647 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 706

Query: 381 EDAVCLYREMLS 392
            +   L R +LS
Sbjct: 707 REVEFLERLLLS 718


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/394 (32%), Positives = 206/394 (52%), Gaps = 3/394 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F++L+     +  +   +  F+ +  + L         L + L K+ +TS A+     IL
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
              + P+   FN L++ LC E +I EA  LF ++      P VV+FNTLING C++ N  
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
              +L   M+        PDV TY+ +I+GLCK+G +D A +L L+M DR + PN +T+ 
Sbjct: 278 QGFRLKRFMMENR---VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFT 334

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +LI G C          ++ +M+  GV+PDV+T+N +IN  CK G + +  +L+  M QR
Sbjct: 335 TLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR 394

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD  TY  L+DG C  G +  A E+   MV +G   D  ++  LI+  C++ +V +A
Sbjct: 395 GLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEA 454

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
               REML   I+P   TY  ++ G  + G++    KL+ +MQ +  VP   T+   ++G
Sbjct: 455 ERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNG 514

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           LCK G +  A  +  A+ N        TYN L+ 
Sbjct: 515 LCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 214/407 (52%), Gaps = 3/407 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           + + F+ L+N     G   +A + F+ +          +   L + L +   T  A   +
Sbjct: 154 SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFY 213

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           EE+++       PDV  +N ++  LCK+  +++A+ L  ++  R + P V+++N+LI G+
Sbjct: 214 EEILD---CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGY 270

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C   +  +   L   MM+N V PDV T++ +IN  CK+G++D  N+L   M  RG+ P+ 
Sbjct: 271 CKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VT+ +L++G C+ GR     E++  M+ KG + DV +YN LIN  CK   + +A  L  E
Sbjct: 331 VTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIE 390

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    ++P   TY  L+ G  + G+L  AL++  +M    +  D+  F   I G C+ G 
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           V+EA +  + +     +    TY  +I+G CK G +KT  KL   +Q  G +P VVT + 
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
           +++ LCK+GQM  AN LL  M     VP ++T+  LL   +Q  K+ 
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWKQG 557



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 199/367 (54%), Gaps = 4/367 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           +L DR    N+TS  A  F++ ++     P +  F +L+  L K  + +    LF  +  
Sbjct: 195 YLFDRLMKLNLTS-PAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGK 253

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            GL P +   N LIN  CK G     F +   ++ +   P+  T++ LINGLC EG++ +
Sbjct: 254 RGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDD 313

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A +LF ++      PN VTF TLING C T    + ++++++M+ +     KPDV+TYN+
Sbjct: 314 ANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG---VKPDVITYNT 370

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+GLCK G + +AK+L+++M  R + P+  TY  LI G C   D + A  +  EM+  G
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++ D V F A+I+  C++G++ +  R L  M++ G+ PD  TY  ++ GFC  G +    
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGF 490

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +L   M   G    V +YN+L+N  CK  ++++A  L   ML+  + P  ITYN LL   
Sbjct: 491 KLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERT 550

Query: 410 FQVGNLG 416
            Q    G
Sbjct: 551 LQAWKQG 557



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 183/347 (52%)

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           + D L K      A     ++ D    P+V  +N L+   C      EA+ LF E+   G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++P VV+FN +IN  CK G +D+  RL   M++  V PD  TY+ L++G C  G++  A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +LF+ M  +G   +  ++  LIN +C   + +  + +Y++ML + ++P VITYNTL++GL
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            +VG+L +A KL+ +M    + PD FT+   IDG CK G +  A+++ + +     EL  
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
             +  LI+G C+ G++  A +    +   G  PD  T + +IH  CK+G +     LL +
Sbjct: 436 VAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           M+    VP  VT+  LL G  +  +     +LL  M    +V  D++
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDIT 542



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 152/305 (49%), Gaps = 1/305 (0%)

Query: 278 AKCLFIEMMD-NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           A  +F  +++  G     + F+ ++N     G      +   L+ +  +     +   L 
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLF 197

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           D    +   S A   +  ++  G   DV  +N+L++  CK+ K+ +A  L+ E+    +R
Sbjct: 198 DRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLR 257

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P+V+++NTL++G  + GNL    +L   M  N V PD FT++  I+GLCK G + +A ++
Sbjct: 258 PTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F  + +        T+  LING C  GR     +++ ++  KG  PDV+T +T+I+ LCK
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            G + +A  L+++M  +   P + T+  L+ G  +       + +  +M  E + + +++
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437

Query: 577 LSSKV 581
            ++ +
Sbjct: 438 FTALI 442



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 145/327 (44%), Gaps = 31/327 (9%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
           N+NP+ ++  SL+  F     W   +  F        +  + ++  M ++ C    + + 
Sbjct: 75  NLNPHSLSPPSLLSFF----KWLSTQHHF--------RLSIHSYCTMTHFLCTHKMLSEA 122

Query: 314 NRLLELMIQR-----------------GVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
             LL+ ++ R                 G +   + ++ LM+ +   G  S A + F  + 
Sbjct: 123 QSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVR 182

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
               +   +S   L +   K      A   Y E+L     P V  +N L+  L +   + 
Sbjct: 183 KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKIN 242

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A  L  ++    + P   +F T I+G CK+G + +  ++ + +   +    + TY+ LI
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLI 302

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           NGLCK G+L  A KLF  +  +G +P+ VT +T+I+  C  G+ D   ++   M  K   
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK 362

Query: 537 PSEVTFCTLLRGF--VQNNKKSKVVVL 561
           P  +T+ TL+ G   V + +++K +V+
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVI 389


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 219/437 (50%), Gaps = 4/437 (0%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  +   G+ P       L+   C+ G       +L  + R  F+ +  T   ++  LC
Sbjct: 60  VFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLC 119

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            +GR  + +  F+++      PNVV +   I+GLC+ R    A  + EEMV   G   KP
Sbjct: 120 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMV---GRGLKP 176

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           +V T+ ++IDGLCK G+ ++A  L L++ K  +  PNV TY  +I G+C       A+ L
Sbjct: 177 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 236

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
            + M++ G++P+  T+  +I  +CK G  D+   L+  M Q G  P+  TYN+++DGFC 
Sbjct: 237 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 296

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G+I  A ++     S+G + D  +Y ILI  +CK   +  A+ L+  M+     P +  
Sbjct: 297 KGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEA 356

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y +L+S   Q   + ++ K  DK  +  ++P   T+ + I G CK G    A++VF+ + 
Sbjct: 357 YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMV 416

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
              C     TY  LI+GLCK  RL+ A  L+  +  K  +P  VT  T+    C+  +  
Sbjct: 417 QNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTS 476

Query: 522 KANDLLLDMEAKNCVPS 538
            A  +L  ++ +  V +
Sbjct: 477 IAVSVLDRLDKRQQVHT 493



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 228/453 (50%), Gaps = 8/453 (1%)

Query: 124 NCLCKMGITSGAFVVLGRIL----RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N + ++G+ +G+FV   ++     R+  +P    F  L+   C EG++ E   L   +  
Sbjct: 42  NWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWR 101

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
           +    +  T   ++  LC         + F  M+ E G    P+VV Y + IDGLCK  +
Sbjct: 102 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML-ETGT--PPNVVNYTAWIDGLCKRRY 158

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM-DNGVQPDVVTFN 298
           V +A  +L +M  R + PNV T+ +LI G C +   + A  LF++++  +  +P+V T+ 
Sbjct: 159 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 218

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            MI   C++GK+ +   LL  M+++G+ P+T TY +L+ G C  G   RA EL   M  +
Sbjct: 219 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQE 278

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   ++Y+YN +I+  CK  K+++A  + R   S+ ++   ITY  L++   + G++  A
Sbjct: 279 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 338

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           L L D+M  N   PD   + + I   C+   + E+ + F            +TY  +I G
Sbjct: 339 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 398

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK+GR   A ++F R+   G   D +T   +I  LCKE ++++A  L   M  K  VP 
Sbjct: 399 YCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPC 458

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           EVT  TL   + +  K S  V +L ++   + V
Sbjct: 459 EVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQV 491



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 238/489 (48%), Gaps = 11/489 (2%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD M +   SP    F  L+ +  +  + + V +L   +   G   D     +++  LC+
Sbjct: 61  FDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCE 120

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G          R+L +   PN V +   I+GLC    + +A  + +++      PNV T
Sbjct: 121 KGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 180

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
             TLI+GLC+   T  A +LF +++    +  KP+V TY  +I G C++G + +A+ LL+
Sbjct: 181 HTTLIDGLCKIGWTERAFRLFLKLIKS--SSYKPNVHTYTVMIGGYCREGKLARAEMLLV 238

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M ++ + PN  TY +LI G C    +  A  L  +M   G  P++ T+NA+I+  CK G
Sbjct: 239 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 298

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           K+ +  ++L +   +G+  D +TY  L+   C  G I+ A +LF  MV  GC  D+ +Y 
Sbjct: 299 KIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYT 358

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI+  C+ +++E++   + + L   + P+  TY ++++G  +VG    AL++ ++M  N
Sbjct: 359 SLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQN 418

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI---RNCKCELRIETYNCLINGLCKMGRL 485
               DS T+   I GLCK   + EA  +++ +   R   CE+   T   L    C+  + 
Sbjct: 419 GCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEV---TRVTLTFEYCRREKT 475

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A  +  RL  +     V T   ++  L   G +D A+  L  +  ++      T+   
Sbjct: 476 SIAVSVLDRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGF 532

Query: 546 LRGFVQNNK 554
           +    +NN+
Sbjct: 533 INSCYENNR 541



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 147/309 (47%), Gaps = 1/309 (0%)

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             ++  F       EA  + +EM  +G+   V T N ++    + G      ++ + M +
Sbjct: 7   RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 66

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            GV+P    + +L+   C  G++     L  +M   G   D  +  +++ + C+  + +D
Sbjct: 67  AGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 126

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
               +R ML     P+V+ Y   + GL +   +  A  ++++M    + P+ +T  T ID
Sbjct: 127 VSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 186

Query: 443 GLCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           GLCK G+   A ++F + I++   +  + TY  +I G C+ G+L  A  L  R+  +G  
Sbjct: 187 GLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLK 246

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P+  T +T+I   CK G  D+A +L+  M+ +  +P+  T+  ++ GF +  K  +   +
Sbjct: 247 PNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 306

Query: 562 LHKMAAEKL 570
           L    ++ L
Sbjct: 307 LRMATSQGL 315



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 165/347 (47%), Gaps = 8/347 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++T+++    +  +      L  R+   GL P+      LI   CK G    AF +
Sbjct: 212 PNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFEL 271

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           + ++ +  F PN  T+N +I+G C +G+I EA ++ +         + +T+  LI   C+
Sbjct: 272 MNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCK 331

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   AL LF+ MV E G  C PD+  Y S+I   C+   ++++++   +     + P 
Sbjct: 332 QGHITYALDLFDRMV-ENG--CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPT 388

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
             TY S+I G+C V     A  +F  M+ NG   D +T+ A+I+  CK+ ++++   L E
Sbjct: 389 KQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYE 448

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-GCRHDVYSYNILINANCKD 377
            M+ + + P  VT  +L   +C   + S A    VS++ +   R  V++ ++++      
Sbjct: 449 GMLDKRLVPCEVTRVTLTFEYCRREKTSIA----VSVLDRLDKRQQVHTVDVVVRKLSAL 504

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             V+ A    +++L E       TY   ++  ++      A ++ +K
Sbjct: 505 GDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEMSEK 551



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 8/224 (3%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    + +  K G+IT   A+  FD M++    P + ++T L++   + +Q +    
Sbjct: 318 DKITYTILITEHCKQGHITY--ALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQK 375

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            F +    GL P       +I   CK+G ++ A  V  R++++    +++T+  LI+GLC
Sbjct: 376 FFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLC 435

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            E R+ EA  L++ +      P  VT  TL    CR   T +A+ + + +        + 
Sbjct: 436 KESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK------RQ 489

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            V T + ++  L   G VD A   L ++ D +   +  TY   I
Sbjct: 490 QVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI 533


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 233/489 (47%), Gaps = 32/489 (6%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P   S+ +++  + +  +    V +F  +    + P+    N +I+   K G     F
Sbjct: 192 PPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF 251

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  +++     PN +T+N L++GLC  GR+ E + L  ++      P+  T++ L +GL
Sbjct: 252 SLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 311

Query: 197 CRTRNTLVALKLFEEMVNE------------FGAICK--------------------PDV 224
            R  ++   L LF + +                 +CK                    P  
Sbjct: 312 SRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 371

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           V YN++I+G C+ G ++ A     QMK R+I P+ ITYN+LI G C  +    A+ L +E
Sbjct: 372 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 431

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M DNGV P V TFN +I+   + G+++K   +L  M + G+ P+ V+Y S+++ FC  G+
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 491

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           I  A  +   M  K    +   YN +I+A  +    + A  L  +M S  I PS++TYN 
Sbjct: 492 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 551

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ GL     + +A ++I+ +  + ++PD+ ++ T I   C  G + +A+ + Q +    
Sbjct: 552 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 611

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            +  + TY+ LI+GL   GRL     L+ ++     +P     + M+    K G   KA 
Sbjct: 612 IKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAE 671

Query: 525 DLLLDMEAK 533
           DL  +M  K
Sbjct: 672 DLRKEMLQK 680



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 157/547 (28%), Positives = 257/547 (46%), Gaps = 40/547 (7%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P ++S  +LL  L    ++  V   F  L S G  PD F  N  +      G    A 
Sbjct: 121 PLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAV 180

Query: 137 VVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
            +L R+ R     PN  ++N +I G+   GR  +A  +F ++   A  PN +T+NT+I+G
Sbjct: 181 GMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDG 240

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
             +  +      L ++MV       KP+ +TYN ++ GLC+ G + +   LL +M  + +
Sbjct: 241 HIKGGDLEAGFSLRDQMVCHG---LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 297

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P+  TY+ L  G     D K    LF + + NGV     T + ++N  CKDGK+     
Sbjct: 298 VPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 357

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           +L+ ++  G+ P  V YN+L++G+C  G +  A   F  M S+  + D  +YN LIN  C
Sbjct: 358 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 417

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K +++ +A  L  EM    + P+V T+NTL+    + G L     ++ +MQ N + P+  
Sbjct: 418 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 477

Query: 436 TFATYIDGLCKNGFVLEAV---------------QVFQAIRNCKCE-------------- 466
           ++ + ++  CKNG + EAV               QV+ AI +   E              
Sbjct: 478 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 537

Query: 467 ------LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                   I TYN LI GLC   ++  A ++ + L +   IPD V+ +T+I   C  G +
Sbjct: 538 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 597

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           DKA DL   M       +  T+  L+ G     +  ++  L  KM    +V S+ ++ + 
Sbjct: 598 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSN-AIHNI 656

Query: 581 VVDLLSK 587
           +V+  SK
Sbjct: 657 MVEAYSK 663



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 175/358 (48%), Gaps = 3/358 (0%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           S N  S   +  F   +K   + G  + +ILL  L K+ +      + + L + GL P  
Sbjct: 312 SRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 371

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            + N LIN  C+ G   GAF   G++      P+ +T+N LINGLC   RI  A  L  +
Sbjct: 372 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 431

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +     +P V TFNTLI+   RT        +  EM  E G   KP+VV+Y SI++  CK
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM-QENG--LKPNVVSYGSIVNAFCK 488

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +G + +A  +L  M  +++ PN   YN++I  +       +A  L  +M  NG+ P +VT
Sbjct: 489 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 548

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I   C   ++ +   ++  +    + PD V+YN+L+   C  G I +A +L   M 
Sbjct: 549 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 608

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
             G +  V +Y+ LI+      ++ +   LY++M+   + PS   +N ++    + GN
Sbjct: 609 KYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 666



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 3/295 (1%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F  M      P   ++  L+  L K ++      L   +  NG+ P +   N LI+   +
Sbjct: 394 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 453

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G     F+VL  +  +   PN V++  ++N  C  G+I EA  +   +      PN   
Sbjct: 454 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 513

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N +I+          A  L E+M +       P +VTYN +I GLC    + +A+E++ 
Sbjct: 514 YNAIIDAYVEHGPNDQAFILVEKMKSNG---ISPSIVTYNLLIKGLCNQSQISEAEEIIN 570

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            + +  + P+ ++YN+LI   C   +  +A  L   M   G++  V T++ +I+     G
Sbjct: 571 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 630

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           ++ ++  L + M+Q  V P    +N +++ +   G   +A +L   M+ K   HD
Sbjct: 631 RLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 685


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 124/361 (34%), Positives = 201/361 (55%), Gaps = 3/361 (0%)

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           +VT+NTLI   CR      A ++   M ++     KP + TYN+II+GLCK G   +AK 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKG---LKPSLFTYNAIINGLCKKGRYARAKG 57

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           +L++M +  ++P+  TYN+L+   C  D++ EAK +F EM+  GV PD+V+F++++    
Sbjct: 58  ILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFS 117

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           ++  +D+       M + G+ PD V Y  LM G+C  G +  A ++   M+ +GC  DV 
Sbjct: 118 RNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 177

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +YN ++N  CK++ + DA  L+ EM+     P   T+ TL+ G  Q GN+  AL L   M
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
              ++ PD   + T IDG CK G + +A +++  + + K      TY  LIN  C +G +
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 297

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +L+  +  KG  P +VTC+T+I   C+ G   KA++ L  M AK   P  +++ TL
Sbjct: 298 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 357

Query: 546 L 546
           +
Sbjct: 358 I 358



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 193/362 (53%), Gaps = 3/362 (0%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           M ++  L+    +    +    +   +   GL P LF  N +IN LCK G  + A  +L 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            +L    +P+T T+N L+   C      EA  +F ++      P++V+F++L+    R R
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           +   AL  F +M  +FG +  PD V Y  ++ G C++G + +A ++  +M ++    +VI
Sbjct: 121 HLDQALVYFRDM-KKFGLV--PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 177

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            YN+++ G C      +A  LF EM++ G  PD  TF  +I+ +C+DG M K   L   M
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            QR + PD V YN+L+DGFC VG + +A EL+  M+S+    +  +Y ILINA C    V
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 297

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
            +A  L+  M+ + I+P+++T NT++ G  + G+   A + + +M    V PD  ++ T 
Sbjct: 298 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 357

Query: 441 ID 442
           I+
Sbjct: 358 IN 359



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 197/360 (54%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           +VTYN++I   C++G +++A E++  M D+ + P++ TYN++I G C    +  AK + I
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM++ G+ PD  T+N ++  +C+     +   +   M+++GV PD V+++SLM  F    
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            + +A   F  M   G   D   Y +L++  C++  + +A+ +  EML +     VI YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           T+L+GL +   L DA KL D+M     +PD +TF T I G C++G + +A+ +F  +   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             +  I  YN LI+G CK+G ++ A +L+  +  +   P+ +T   +I+  C  G + +A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             L   M  K   P+ VT  T+++G+ ++   SK    L +M A+ +    +S ++ + D
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 164/301 (54%), Gaps = 3/301 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+ +  SP  T++  LL    +   +     +F  +   G+ PDL   + L+    +   
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A V    + +    P+ V +  L++G C  G ++EA ++  ++    C  +V+ +NT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           ++NGLC+ +    A KLF+EMV E GA+  PD  T+ ++I G C+DG + KA  L   M 
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMV-ERGAL--PDFYTFTTLIHGHCQDGNMTKALSLFGTMT 238

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
            RNI P+++ YN+LI GFC V + ++A  L+  M+   + P+ +T+  +IN  C  G + 
Sbjct: 239 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 298

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +  RL ++MI++G+ P  VT N+++ G+C  G  S+A E    M++KG   D  SYN LI
Sbjct: 299 EAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358

Query: 372 N 372
           N
Sbjct: 359 N 359



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 176/344 (51%), Gaps = 3/344 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    + M      P + ++  ++  L K  +Y     +   + + GL PD    N L+
Sbjct: 19  EAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 78

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C+    S A  + G +LR    P+ V+F+ L+        + +A   F+ +  F   
Sbjct: 79  VESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLV 138

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ V +  L++G CR  N L ALK+ +EM+ +    C  DV+ YN+I++GLCK+  +  A
Sbjct: 139 PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG---CVLDVIAYNTILNGLCKEKMLTDA 195

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L  +M +R   P+  T+ +LI G C   +  +A  LF  M    ++PD+V +N +I+ 
Sbjct: 196 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDG 255

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G+M+K + L + MI R + P+ +TY  L++ +C VG +S A  L+  M+ KG +  
Sbjct: 256 FCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 315

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           + + N +I   C+      A      M+++ + P  I+YNTL++
Sbjct: 316 LVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/275 (34%), Positives = 148/275 (53%), Gaps = 3/275 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M++    P + SF+ L+ + ++N+  D  +  F+ +   GL PD  +  +L
Sbjct: 88  SEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVL 147

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C+ G    A  +   +L      + + +N ++NGLC E  + +A +LF ++     
Sbjct: 148 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 207

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+  TF TLI+G C+  N   AL LF  M        KPD+V YN++IDG CK G ++K
Sbjct: 208 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN---IKPDIVAYNTLIDGFCKVGEMEK 264

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL   M  R I PN ITY  LI  +C V    EA  L+  M++ G++P +VT N +I 
Sbjct: 265 ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 324

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
             C+ G   K +  L  MI +GV PD ++YN+L++
Sbjct: 325 GYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 242/497 (48%), Gaps = 17/497 (3%)

Query: 33  KTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLA 92
           ++ + +H     + I+K +    K+G I  N+A+Y FD M +         +   + +L 
Sbjct: 3   QSSIGAHRLAYRSQISKLV----KAGLI--NQAIYLFDQMTESNCRVFSVDYNRFIGVLL 56

Query: 93  KNKQYDTVVSLFKRL---NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS---C 146
           ++ +       ++R        L P  F  +  I+ LC         ++   +L      
Sbjct: 57  RHSRLHLAHHYYRRHVIPRGFSLLP--FTYSRFISALCSAPNNINLPLIHSLLLDMDSLG 114

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F P+   FN  +N LC + R+  A  LF  +     DP+VV++  +I+ LC  +    A 
Sbjct: 115 FVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAA 174

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           K++  ++++      PD     +++ GLC  G VD A EL++ +    +  N + YN+LI
Sbjct: 175 KVWRRLIDKG---LSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALI 231

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            GFC +    +A  +   M   G  PD+VT+N ++NY C++G +D+  RL+E M + GV 
Sbjct: 232 DGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVE 291

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD  +YN L+ GFC    + RA  + V  +      DV SYN +I A CK ++      L
Sbjct: 292 PDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYEL 351

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + EM  + IRP ++T+N L+    + G+     KL+D+M    V+PD   +   +D LCK
Sbjct: 352 FEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCK 411

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           NG V  A  VF+ +        + +YN L+NG CK  R+  A  LF  +Q KG  PD VT
Sbjct: 412 NGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVT 471

Query: 507 CSTMIHWLCKEGQMDKA 523
              ++  L +  ++  A
Sbjct: 472 YKLIVGGLIRGKKISLA 488



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 197/401 (49%), Gaps = 3/401 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + +F   L +L +  + +T + LF  + S G  PD+    ++I+ LC       A  V
Sbjct: 117 PDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKV 176

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             R++    +P+      L+ GLC+ GR+  A  L   +       N + +N LI+G CR
Sbjct: 177 WRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCR 236

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+K+ +  ++  G  C PD+VTYN +++  C++G VD+A  L+  M+   + P+
Sbjct: 237 MGRVDKAMKI-KAFMSRTG--CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPD 293

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           + +YN L+ GFC  +    A  + +E M      DVV++N +I   CK  +  K   L E
Sbjct: 294 LYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFE 353

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M  +G+ PD VT+N L+D F   G     ++L   M       D   Y  +++  CK+ 
Sbjct: 354 EMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNG 413

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           KV+ A  ++R+M+   + P VI+YN LL+G  +   + DA+ L D+MQ   + PD  T+ 
Sbjct: 414 KVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYK 473

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
             + GL +   +  A +V+  +      L       L+N +
Sbjct: 474 LIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAI 514



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 231/477 (48%), Gaps = 9/477 (1%)

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV--- 179
           I+ L K G+ + A  +  ++  S     +V +N  I  L    R+  A   +++  +   
Sbjct: 17  ISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRG 76

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC-KPDVVTYNSIIDGLCKDG 238
           F+  P   T++  I+ LC   N  + L L   ++ +  ++   PD+  +N+ ++ LC+  
Sbjct: 77  FSLLP--FTYSRFISALCSAPNN-INLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQN 133

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            ++ A EL   M  +  +P+V++Y  +I   C    + EA  ++  ++D G+ PD     
Sbjct: 134 RLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACV 193

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A++   C  G++D    L+  +I+ GV  +++ YN+L+DGFC +GR+ +A ++   M   
Sbjct: 194 ALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRT 253

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  D+ +YNIL+N  C++  V++AV L   M    + P + +YN LL G  +   +  A
Sbjct: 254 GCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRA 313

Query: 419 -LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
            L ++++MQ   +  D  ++ T I   CK     +  ++F+ +        + T+N LI+
Sbjct: 314 HLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILID 372

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
              + G      KL   +     +PD +  + ++  LCK G++D A+ +  DM      P
Sbjct: 373 AFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNP 432

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
             +++  LL GF + ++    + L  +M ++ L   +++    V  L+   K    C
Sbjct: 433 DVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLAC 489



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 10/247 (4%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M Q  +    + Y S +      G I++A  LF  M    CR     YN  I    +  +
Sbjct: 1   MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60

Query: 380 VEDAVCLYREMLSER---IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN----DVVP 432
           +  A   YR  +  R   + P   TY+  +S L    N    L LI  + L+      VP
Sbjct: 61  LHLAHHYYRRHVIPRGFSLLP--FTYSRFISALCSAPN-NINLPLIHSLLLDMDSLGFVP 117

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D + F TY++ LC+   +  A+++F ++ +   +  + +Y  +I+ LC   R   A K++
Sbjct: 118 DIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVW 177

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            RL  KG  PD   C  ++  LC  G++D A +L++ +       + + +  L+ GF + 
Sbjct: 178 RRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRM 237

Query: 553 NKKSKVV 559
            +  K +
Sbjct: 238 GRVDKAM 244



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
             D M KM+  P    +T ++  L KN + D   S+F+ +  NG+ PD+   N L+N  C
Sbjct: 386 LLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFC 445

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K      A  +   +      P+ VT+  ++ GL    +I  A R++ ++       N  
Sbjct: 446 KTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRH 505

Query: 188 TFNTLINGLCRTRNT 202
              TL+N +  +  T
Sbjct: 506 LSETLVNAIQSSDGT 520


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 154/492 (31%), Positives = 232/492 (47%), Gaps = 40/492 (8%)

Query: 60  ITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS---------- 109
           ++++ A+     +  +  SP +    +LLT  A  + + T + L+ +L S          
Sbjct: 31  LSADRALCPLSVLPHLSASPSLPH--LLLTASAAARPHATSLRLYAQLKSLSVPIPVASL 88

Query: 110 ------------NGLFPDLFVL---------NLLINCLCKMGITSGAFVVLGRILRSCFT 148
                         LF D++ L         N+++  LC  G    A      +LR    
Sbjct: 89  HPLLSSLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRAL----ELLRQMPR 144

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           PN VT+N +I G CA GR+  A  + +++       P+  T+ TLI+G C+      A+K
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVK 204

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +F+EM+ + G +  P  V YN++I G C  G +D A +    M  R I   V TYN L+ 
Sbjct: 205 VFDEMLTK-GEVA-PSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMH 262

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
                    +A  +  EM  NG  PDV T+N +IN  CK+G   K   + E M Q+GV  
Sbjct: 263 ALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRA 322

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             VTY SL+  F   G++     LF   V KG R DV  YN LIN++C    +E A  + 
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIM 382

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            EM  +RI P  +TYNTL+ G   +G L +A  LID+M    + PD  ++ T I G    
Sbjct: 383 AEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMK 442

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + +A++V   + +      + TYN LI GLCK+ +   A  L   +  KG  PD  T 
Sbjct: 443 GDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTY 502

Query: 508 STMIHWLCKEGQ 519
            ++I  L  E +
Sbjct: 503 ISLIEGLTTEDE 514



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 204/407 (50%), Gaps = 9/407 (2%)

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
             TFN ++  LC T   + AL+L  +M        +P+ VTYN++I G C  G V  A E
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQM-------PRPNAVTYNTVIAGFCARGRVQAALE 168

Query: 246 LLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINY 303
           ++ +M++R  I P+  TY +LI G+C +   ++A  +F EM+  G V P  V +NA+I  
Sbjct: 169 VMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGG 228

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C  GK+D   +  E M+QRG+     TYN LM    +  R S A  +   M   G   D
Sbjct: 229 YCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPD 288

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V++YNILIN  CK+   + A+ ++ EM  + +R + +TY +L+    + G + +  +L +
Sbjct: 289 VFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFN 348

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
                 + PD   +   I+  C  G +  A ++   +   +      TYN L+ G C +G
Sbjct: 349 VAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLG 408

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           RL  A  L   +  +G  PD+V+ +T+I     +G +  A  +  +M  K   P+ +T+ 
Sbjct: 409 RLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYN 468

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            L++G  +  +      L+ +M A+ +   D +  S +  L ++D++
Sbjct: 469 ALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDER 515



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 114/225 (50%), Gaps = 5/225 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   K GN    +A+  F+ M +        ++T L+ + ++  Q      LF     
Sbjct: 295 LINGYCKEGN--EKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK 352

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ PD+ + N LIN  C  G    A+ ++  + +    P+ +T+N L+ G C  GR+ E
Sbjct: 353 KGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE 412

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  L  ++      P++V++NTLI+G     +   AL++ +EM+++      P ++TYN+
Sbjct: 413 ARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG---FNPTLMTYNA 469

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
           +I GLCK    D A+ L+ +M  + I P+  TY SLI G    D+
Sbjct: 470 LIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514



 Score = 40.0 bits (92), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 43/106 (40%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    D M K    P + S+  L++  +        + +   +   G  P L   N L
Sbjct: 411 DEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNAL 470

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
           I  LCK+     A  ++  ++    TP+  T+  LI GL  E   M
Sbjct: 471 IQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDERM 516


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 226/449 (50%), Gaps = 14/449 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           +F  +L  LA+ +    +  ++  +     + PD+    +L+N LCK G    A  VL  
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 142 ILRSCF--TPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLINGLC 197
           + R      P+ VT N +++GLC  GR+ EA    ++   +V  C PN VT+N LI+  C
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  N  +A +L E+M NE       ++VT N+I+ GLC+ G    A E   +   R + P
Sbjct: 258 RVGNISMAYELVEKMENEG---VPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWP 312

Query: 258 ----NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
               N +TY++L+      ++   A  LF E M  G  PD + +  MI+   + G+++  
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             +   M + G   DT  YN L+ GFC   R+  A EL   M   G R DV +YN L++ 
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
           +CK         L  +M+ +  +PSVIT+ TL+ G  +VG + +AL+++  M  + + P+
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           +  + T ID LCK G V  A+++F  ++       + T+N L+ GL      + A +L  
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMD 552

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
           +++ +   PD VT   ++ WL   G+ D+
Sbjct: 553 QMREERCFPDYVTVDVLMEWLPVIGETDR 581



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 236/473 (49%), Gaps = 20/473 (4%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT--PNTVTFNFLINGLCAEGRIMEAAR 172
           D+F  N ++  L ++    G   +   +++ C +  P+ VT+  L+NGLC  GR+ +A R
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYA-LMQGCASVRPDVVTYGILVNGLCKAGRVGDALR 193

Query: 173 LFKKLNVFACD--PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
           +   ++    D  P+VVT NT+++GLC++     AL   E+ ++     C P+ VTYN +
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHG-CPPNTVTYNCL 252

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC-------CVDDWKEAKCLFI 283
           ID  C+ G +  A EL+ +M++  +  N++T N+++ G C        ++ ++E + ++ 
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           E   N V     T++ ++        +     L    +  G +PD + Y +++ G    G
Sbjct: 313 EGKGNAV-----TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAG 367

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           R+  A  +  SM   G + D  +YNILI   C+ +++ +A  L +EM    IRP V TYN
Sbjct: 368 RLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYN 427

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TLLSG  + G+     +L+ KM  +   P   TF T + G CK G + EA+++ +++   
Sbjct: 428 TLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDES 487

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                   YN LI+ LCK G +  A +LF  ++ K    +V T + ++  L  +   +KA
Sbjct: 488 GIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGF--VQNNKKSKVVVLLHKMAAEKLVVSD 574
            +L+  M  + C P  VT   L+     +    + K  +   +  A K +VSD
Sbjct: 548 FELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASKRIVSD 600



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 207/424 (48%), Gaps = 10/424 (2%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V  FN+++  L R R+     +++  M  +  A  +PDVVTY  +++GLCK G V  A 
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALM--QGCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 245 ELL--LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD--NGVQPDVVTFNAM 300
            +L  +  +D +I P+V+T N+++ G C     +EA     + M   +G  P+ VT+N +
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS--MVSK 358
           I+  C+ G +     L+E M   GV  + VT N+++ G C  GR   A E F     V  
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
             + +  +Y+ L+ A      V  A+ L+ E +SE   P  I Y T++SGL Q G L DA
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             +   M+      D+  +   I G C+   + EA ++ Q ++       + TYN L++G
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK G      +L  ++   G  P V+T  T++H  CK G++D+A  +L  M+     P+
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD--KKYRECLN 596
            V + TL+    +       + L  +M  + +  +  + ++ +  L  K+  +K  E ++
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMD 552

Query: 597 QFRH 600
           Q R 
Sbjct: 553 QMRE 556



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 199/395 (50%), Gaps = 11/395 (2%)

Query: 56  KSGNITSNEAVYFFDCMIK--MKPSPGMTSFTILLTMLAKNKQYDTVVSLF-KRLNS-NG 111
           K+G +   +A+   D M +  +   P + +   ++  L K+ +    ++   +R++S +G
Sbjct: 184 KAGRV--GDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHG 241

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
             P+    N LI+  C++G  S A+ ++ ++       N VT N ++ GLC  GR   A 
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301

Query: 172 RLFKKLNVFACDP--NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
             F++      +   N VT++TL+  L  T N  +A++LF E ++E  +   PD + Y +
Sbjct: 302 EFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHS---PDAIMYFT 358

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I GL + G ++ A  +   MK+     +   YN LI GFC      EA  L  EM + G
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++PDV T+N +++ +CK G    V+ LL  MI  G  P  +T+ +L+ G+C VG+I  A 
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            +  SM   G   +   YN LI+  CK   V+ A+ L+ EM  + +  +V T+N LL GL
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
                   A +L+D+M+     PD  T    ++ L
Sbjct: 539 RDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 3/187 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA      M ++   P + ++  LL+   K   +  V  L  ++  +G  P +     L
Sbjct: 405 HEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTL 464

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK+G    A  +L  +  S   PN V +N LI+ LC  G +  A  LF ++   + 
Sbjct: 465 VHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSV 524

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             NV TFN L+ GL        A +L ++M  E    C PD VT + +++ L   G  D+
Sbjct: 525 PANVTTFNALLKGLRDKNMPEKAFELMDQMREER---CFPDYVTVDVLMEWLPVIGETDR 581

Query: 243 AKELLLQ 249
            K  + Q
Sbjct: 582 LKRFMQQ 588


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 263/510 (51%), Gaps = 28/510 (5%)

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRS---CFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            N ++N + + G+   A      ++ +     +PN +TFN +I  +C  G + +A ++F+
Sbjct: 164 FNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFR 223

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            + +  C+P+V T+ TL++GLC+      A+ L +EM  +    C P  VT+N +I+GLC
Sbjct: 224 DMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDG---CFPSPVTFNVLINGLC 280

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G + +A +L+  M  +   PN +TYN+LI G C     ++A  L   M+ +   P+VV
Sbjct: 281 KKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVV 340

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +IN   K G+      +L LM +RG   +   Y++L+ G    G+   A  LF  M
Sbjct: 341 TYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEM 400

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             KG   +   Y+ +I+  C+D K +DAV +  EM ++   P+  T ++L+ G F+ GN 
Sbjct: 401 TVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNS 460

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             A+++   M  ++   +   ++  I GLCK+G V EA+ V+  +    C+  +  Y+ +
Sbjct: 461 HRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSM 520

Query: 476 INGLCKMGRLKTACKLFHRLQHKGP--IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
           INGL   G ++ A +L++ +  +GP   PDVVT + +++ LCK+  + +A DLL  M  +
Sbjct: 521 INGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDR 580

Query: 534 NCVPSEVT---FCTLLRGFVQNNKKSK------VVVLLHKMAA-----------EKLVVS 573
            C P  VT   F  +LR  +   +  +      VV LL +              +KL+  
Sbjct: 581 GCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPP 640

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
             S  ++VV+ L K KK +  + +   +L+
Sbjct: 641 KHSTWARVVENLCKPKKVQAVIQKCWSILY 670



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/410 (31%), Positives = 221/410 (53%), Gaps = 10/410 (2%)

Query: 63  NEAVYFFDCMIKMKP---SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
           + A+ F++ +I  K    SP + +F +++  + K    D  + +F+ +      PD++  
Sbjct: 178 HRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTY 237

Query: 120 NLLINCLCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
             L++ LCK      A  +L  + +  CF P+ VTFN LINGLC +G +  AA+L   + 
Sbjct: 238 CTLMDGLCKADRIDEAVSLLDEMQIDGCF-PSPVTFNVLINGLCKKGDLSRAAKLVDNMF 296

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
           +  C PN VT+NTLI+GLC       A+ L + MV+   + C P+VVTY +II+GL K G
Sbjct: 297 LKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVS---SKCVPNVVTYGTIINGLVKQG 353

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
                  +L  M++R    N   Y++LI G       +EA  LF EM   G + + + ++
Sbjct: 354 RALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYS 413

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+I+  C+DGK D    +L  M  +G  P+  T +SLM GF   G   RA E++  M   
Sbjct: 414 AVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKH 473

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
               +   Y++LI+  CKD KV++A+ ++ +ML +  +P V+ Y+++++GL   G + DA
Sbjct: 474 NFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDA 533

Query: 419 LKLIDKM--QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           ++L ++M  Q  D  PD  T+   ++ LCK   +  A+ +  ++ +  C+
Sbjct: 534 MQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCD 583



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 194/382 (50%), Gaps = 1/382 (0%)

Query: 169 EAARLFKKLNV-FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
           +A  LF ++   F C     +FN+++N + +      AL+ +  ++   G    P+V+T+
Sbjct: 143 KAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTF 202

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N +I  +CK G VD A ++   M  R   P+V TY +L+ G C  D   EA  L  EM  
Sbjct: 203 NLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI 262

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           +G  P  VTFN +IN  CK G + +  +L++ M  +G  P+ VTYN+L+ G CL G++ +
Sbjct: 263 DGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEK 322

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A  L   MVS  C  +V +Y  +IN   K  +  D  C+   M       +   Y+TL+S
Sbjct: 323 AISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLIS 382

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GLF+ G   +A+ L  +M +     ++  ++  IDGLC++G   +AV+V   + N  C  
Sbjct: 383 GLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTP 442

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
              T + L+ G  + G    A +++  +       + V  S +IH LCK+G++ +A  + 
Sbjct: 443 NAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVW 502

Query: 528 LDMEAKNCVPSEVTFCTLLRGF 549
             M  K C P  V + +++ G 
Sbjct: 503 TQMLGKGCKPDVVAYSSMINGL 524



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 214/449 (47%), Gaps = 57/449 (12%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  M   K  P + ++  L+  L K  + D  VSL   +  +G FP     N+L
Sbjct: 216 DDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVL 275

Query: 123 INCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           IN LCK G ++  A +V    L+ C  PN VT+N LI+GLC +G++ +A  L  ++    
Sbjct: 276 INGLCKKGDLSRAAKLVDNMFLKGCI-PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK 334

Query: 182 CDPNVVTFNTLINGLCRTRNTL---VALKLFEEM---VNEF------GAICKP------- 222
           C PNVVT+ T+INGL +    L     L L EE    VNE+        + K        
Sbjct: 335 CVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAM 394

Query: 223 -------------DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
                        + + Y+++IDGLC+DG  D A E+L +M ++   PN  T +SL+ GF
Sbjct: 395 HLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGF 454

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
               +   A  ++ +M  +    + V ++ +I+  CKDGK+ +   +   M+ +G  PD 
Sbjct: 455 FEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDV 514

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKG--CRHDVYSYNILINANCKDQKVEDAVCLY 387
           V Y+S+++G  + G +  A +L+  M+ +G   + DV +YNIL+N  CK   +  A+ L 
Sbjct: 515 VAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLL 574

Query: 388 REMLSERIRPSVIT---------------------YNTLLSGLFQVGNLGDALKLIDKMQ 426
             ML     P ++T                      + L+  L +   +  A K+++ M 
Sbjct: 575 NSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVML 634

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
              + P   T+A  ++ LCK   V   +Q
Sbjct: 635 QKLLPPKHSTWARVVENLCKPKKVQAVIQ 663



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 214/419 (51%), Gaps = 11/419 (2%)

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV---TFNTLINGLCRTRNTLVALKLF 209
           TF  LIN     G   +   L K L+   C+  V+    F  +     +      A+ LF
Sbjct: 92  TFYSLINNYANLG---DFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLF 148

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL---LLQMKDRNINPNVITYNSLI 266
           + M  EF   CK    ++NS+++ + ++G   +A E    ++  K  +I+PNV+T+N +I
Sbjct: 149 DRMACEFE--CKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVI 206

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
              C V    +A  +F +M     +PDV T+  +++  CK  ++D+   LL+ M   G  
Sbjct: 207 KAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCF 266

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P  VT+N L++G C  G +SRA +L  +M  KGC  +  +YN LI+  C   K+E A+ L
Sbjct: 267 PSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISL 326

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
              M+S +  P+V+TY T+++GL + G   D   ++  M+      + + ++T I GL K
Sbjct: 327 LDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFK 386

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G   EA+ +F+ +     EL    Y+ +I+GLC+ G+   A ++   + +KG  P+  T
Sbjct: 387 EGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYT 446

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           CS+++    + G   +A ++  DM   N   +EV +  L+ G  ++ K  + +++  +M
Sbjct: 447 CSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQM 505



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 32/240 (13%)

Query: 24  CSFGRPPNPKTDLSSHHFKDGT----SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           C  G+P +    LS    K  T    + +  +    ++GN  S+ AV  +  M K   + 
Sbjct: 420 CRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGN--SHRAVEVWKDMAKHNFTQ 477

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
               +++L+  L K+ +    + ++ ++   G  PD+   + +IN L   G+   A  + 
Sbjct: 478 NEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLY 537

Query: 140 GRIL--RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT--------- 188
             +L       P+ VT+N L+N LC +  I  A  L   +    CDP++VT         
Sbjct: 538 NEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLR 597

Query: 189 ------------FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
                        + L+  L + +  L A K+ E M+ +   +  P   T+  +++ LCK
Sbjct: 598 EKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQK---LLPPKHSTWARVVENLCK 654


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/418 (32%), Positives = 219/418 (52%), Gaps = 4/418 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  L+  L K ++    + L   + +NG    +     LI+ LCK G    A  +L ++ 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
            +   PN VT+  LI+GLC   R  +A +  K++    C+P++VT+N+LI+GLC      
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  + +E++ E G I  PDVVTYN+ I GLCK G +DK  E+L +M    I+P+V+T+ 
Sbjct: 133 DAGLVLQELMIESGRI--PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFC 190

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S+I G C  +   +A  +F  M++ G  PD +T++ M++   +  ++D V  +LE M++ 
Sbjct: 191 SIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKS 250

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G    + TY  L+      G I  A   +   +  GC  +VY++N  I A C+  K   A
Sbjct: 251 GHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLA 310

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV-PDSFTFATYID 442
             +   M+     P++++YN ++ GL + GN+ DA KL  KM  +    PD   F T I 
Sbjct: 311 KNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLIS 370

Query: 443 GLCKNGFVLEAVQVFQAIRNCK-CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
           G CK G + +A Q+ + ++    C   + TYN +I+G  K G LK A  L   +Q  G
Sbjct: 371 GFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 224/424 (52%), Gaps = 6/424 (1%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F  +   +N LI GLC   +   A  L   +     D +VVT+ TLI+GLC++ +   A 
Sbjct: 6   FRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQ 65

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            L ++M +   A C P+VVTY ++IDGLCK      A + + +M      P+++TYNSLI
Sbjct: 66  ALLQKMAD---AGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLI 122

Query: 267 CGFCCVDDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
            G C  +   +A  +  E+M ++G  PDVVT+N  I+  CK GK+DK   +LE M + G+
Sbjct: 123 HGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGI 182

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
           +PD VT+ S++ G C   RI  A ++F  M+ +GC  D  +Y+I+++   +  +++    
Sbjct: 183 SPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEE 242

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           +   M+         TY  L+  L + G++  A    ++      V + +T   +I  LC
Sbjct: 243 VLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALC 302

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI-PDV 504
           ++G    A  +   +        + +YN +I+GLCK G +  A KL  ++   G   PDV
Sbjct: 303 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDV 362

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKN-CVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +  +T+I   CK G++ +A  LL +M+AKN CVP  VT+ T++ G  +     +  +LL 
Sbjct: 363 IFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLE 422

Query: 564 KMAA 567
           +M A
Sbjct: 423 EMQA 426



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 212/406 (52%), Gaps = 7/406 (1%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           +   +NTLI GLC+ R    AL+L   M  N + A     VVTY ++IDGLCK G +D A
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDA----SVVTYTTLIDGLCKSGDLDAA 64

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           + LL +M D    PNV+TY +LI G C      +A      M+ +G +PD+VT+N++I+ 
Sbjct: 65  QALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHG 124

Query: 304 NCKDGKMDKVNRLL-ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
            C   +MD    +L ELMI+ G  PD VTYN+ + G C  G++ +  E+   M   G   
Sbjct: 125 LCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISP 184

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV ++  +I+  CK  +++DA  +++ ML     P  +TY+ +L  L +   L    +++
Sbjct: 185 DVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVL 244

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M  +     S T+A  I  L + G +  A   ++      C + + T+N  I  LC+ 
Sbjct: 245 EHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRS 304

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM-EAKNCVPSEVT 541
           G+   A  +   +   G +P++++ + +I  LCK G +D A  L   M ++  C P  + 
Sbjct: 305 GKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIF 364

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           F TL+ GF +  + S+   LL +M A+ + V D+   + ++D  SK
Sbjct: 365 FNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSK 410



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/421 (32%), Positives = 220/421 (52%), Gaps = 6/421 (1%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D  + N LI  LCK      A  +L  +  + +  + VT+  LI+GLC  G +  A  L 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           +K+    C PNVVT+  LI+GLC+ R    A++  + M+      C+PD+VTYNS+I GL
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG---CEPDLVTYNSLIHGL 125

Query: 235 CKDGFVDKAKELLLQ-MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           C    +D A  +L + M +    P+V+TYN+ I G C      +   +  EM   G+ PD
Sbjct: 126 CMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPD 185

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VVTF ++I+  CK  ++D   ++ + M++RG  PD++TY+ ++D      R+    E+  
Sbjct: 186 VVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLE 245

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            MV  G      +Y  LI+A  +   +E A   Y + +       V T+N  +  L + G
Sbjct: 246 HMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSG 305

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK-CELRIETY 472
               A  ++  M  +  +P+  ++   IDGLCK+G V +A ++ + + +   C+  +  +
Sbjct: 306 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFF 365

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGP-IPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           N LI+G CK GRL  A +L   ++ K   +PDVVT +TMI    K G + +A  LL +M+
Sbjct: 366 NTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQ 425

Query: 532 A 532
           A
Sbjct: 426 A 426



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 204/384 (53%), Gaps = 6/384 (1%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++T L+  L K+   D   +L +++   G  P++     LI+ LCK      A   + 
Sbjct: 45  VVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVK 104

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD-PNVVTFNTLINGLCRT 199
           R+LRS   P+ VT+N LI+GLC   R+ +A  + ++L + +   P+VVT+NT I+GLC+ 
Sbjct: 105 RMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKA 164

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                 L++ EEM  + G I  PDVVT+ SII GLCK   +D A ++   M +R   P+ 
Sbjct: 165 GKLDKGLEMLEEM--DRGGI-SPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDS 221

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TY+ ++      +     + +   M+ +G      T+  +I+   + G ++  +   E 
Sbjct: 222 LTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQ 281

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
            ++ G   +  T+N+ +   C  G+   A+ + + M+  G   ++ SYN +I+  CK   
Sbjct: 282 AMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGN 341

Query: 380 VEDAVCLYREML-SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV-VPDSFTF 437
           V+DA  L R+ML S   +P VI +NTL+SG  + G L  A +L+ +M+  ++ VPD  T+
Sbjct: 342 VDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTY 401

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIR 461
            T IDG  K G + +A  + + ++
Sbjct: 402 NTMIDGQSKFGSLKQAKLLLEEMQ 425



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 194/374 (51%), Gaps = 8/374 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG++ + +A      M     +P + ++T L+  L K ++    +   KR+  +G  PD
Sbjct: 57  KSGDLDAAQA--LLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPD 114

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           L   N LI+ LC       A +VL  ++  S   P+ VT+N  I+GLC  G++ +   + 
Sbjct: 115 LVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEML 174

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           ++++     P+VVTF ++I+GLC+      A ++F+ M+ E G  C PD +TY+ ++D L
Sbjct: 175 EEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGML-ERG--CVPDSLTYSIMLDNL 231

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
            +   +D  +E+L  M          TY  LI       D + A   + + M+ G   +V
Sbjct: 232 SRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEV 291

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            T NA I   C+ GK      +L  MI+ G  P+ ++YN ++DG C  G +  A +L   
Sbjct: 292 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 351

Query: 355 MVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI-RPSVITYNTLLSGLFQV 412
           M+  G C+ DV  +N LI+  CK  ++  A  L +EM ++ I  P V+TYNT++ G  + 
Sbjct: 352 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKF 411

Query: 413 GNLGDALKLIDKMQ 426
           G+L  A  L+++MQ
Sbjct: 412 GSLKQAKLLLEEMQ 425



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 141/276 (51%), Gaps = 1/276 (0%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M  R+   +   YN+LI G C     + A  L   M  NG    VVT+  +I+  CK G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +D    LL+ M   G  P+ VTY +L+DG C   R   A +    M+  GC  D+ +YN 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 370 LINANCKDQKVEDAVCLYREMLSERIR-PSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           LI+  C   +++DA  + +E++ E  R P V+TYNT +SGL + G L   L+++++M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            + PD  TF + I GLCK   + +A QVF+ +    C     TY+ +++ L +  RL T 
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            ++   +   G      T + +IH L + G ++ A+
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESAS 276



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 151/304 (49%), Gaps = 5/304 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
            N   +  +   + MI+    P + ++   ++ L K  + D  + + + ++  G+ PD+ 
Sbjct: 128 ANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVV 187

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
               +I+ LCK      AF V   +L     P+++T++ +++ L    R+     + + +
Sbjct: 188 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                     T+  LI+ L R  +   A   +E+ +    A C  +V T+N+ I  LC+ 
Sbjct: 248 VKSGHYALSATYAPLIHALIRAGDIESASWAYEQAME---AGCVMEVYTHNAFIGALCRS 304

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVT 296
           G    AK +LL M +    PN+++YN +I G C   +  +A  L  +M+D+G  +PDV+ 
Sbjct: 305 GKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIF 364

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGV-NPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           FN +I+  CK G++ +  +LL+ M  + +  PD VTYN+++DG    G + +A+ L   M
Sbjct: 365 FNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424

Query: 356 VSKG 359
            + G
Sbjct: 425 QAVG 428



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 7/291 (2%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           + S    D  +   F++   K+G +  ++ +   + M +   SP + +F  +++ L K  
Sbjct: 143 IESGRIPDVVTYNTFISGLCKAGKL--DKGLEMLEEMDRGGISPDVVTFCSIISGLCKAN 200

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           + D    +FK +   G  PD    +++++ L +         VL  +++S     + T+ 
Sbjct: 201 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYA 260

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+ L   G I  A+  +++     C   V T N  I  LCR+    +A  +   M+ E
Sbjct: 261 PLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMI-E 319

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVITYNSLICGFCCVDD 274
            G++  P++++YN +IDGLCK G VD A +L  +M D     P+VI +N+LI GFC    
Sbjct: 320 SGSL--PNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGR 377

Query: 275 WKEAKCLFIEMMDNGV-QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
             +A+ L  EM    +  PDVVT+N MI+   K G + +   LLE M   G
Sbjct: 378 LSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 75/169 (44%)

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D+  + T I GLCK      A+++   +     +  + TY  LI+GLCK G L  A  L 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            ++   G  P+VVT + +I  LCK  +   A   +  M    C P  VT+ +L+ G    
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           N+     ++L ++  E   + D+   +  +  L K  K  + L     +
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 177


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 248/525 (47%), Gaps = 37/525 (7%)

Query: 63  NEAVYFFDCMIKMKP-SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + A+ F+   IK+    P + S   LL +L K+ + +    ++  +       D + + +
Sbjct: 118 DRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCI 177

Query: 122 LINCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           ++  LCK G +  G  ++  R  R C  PN V +N LI+G C +G    A  LFK+L + 
Sbjct: 178 MVKGLCKEGKVEDGWKLIEKRWGRGCM-PNIVFYNTLIDGYCKKGDTERANVLFKELKMK 236

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG----------------------- 217
              P V T+  +ING C+     V  KL  EM +E G                       
Sbjct: 237 GFLPTVKTYGAIINGFCKKGKFEVVDKLLVEM-SERGLDVSIHIYNNIIDAQFKHGCRIE 295

Query: 218 ----------AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
                     + C PD+ TYN +I G C  G V KA++LL Q   R + PN ++Y  LI 
Sbjct: 296 AADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIH 355

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            +C   ++  A  L I+M + G +PD+VT+ A+I+     G++D    +   M+++GV P
Sbjct: 356 NYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLP 415

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D   YN LM G C  GR+  A+ L   M+ +    D +    L++   +    E+A  L+
Sbjct: 416 DANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLF 475

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
              + + I P V+ YN ++ G  + G + DAL    +M      PD FT++T IDG  K 
Sbjct: 476 ELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKM 535

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             +  A+++F  +    C+  + TY  LING C  G +  A K F ++      P+VVT 
Sbjct: 536 NDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTY 595

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           + +I   CK   + KA      M  + C+P++VT+  L+ G   N
Sbjct: 596 TILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNN 640



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 155/508 (30%), Positives = 255/508 (50%), Gaps = 27/508 (5%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           DTV  + K    +G  PD+   N+LI   C  G    A  +L + ++    PN V++  L
Sbjct: 298 DTVGWMIK----SGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPL 353

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           I+  C +G  + A  L  K++     P++VT+  LI+GL       VAL +  +MV E G
Sbjct: 354 IHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMV-EKG 412

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
            +  PD   YN ++ GLCK G +  AK LL +M D+N+ P+     +L+ GF    D++E
Sbjct: 413 VL--PDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEE 470

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           AK LF   ++ G+ P VV +NAMI   CK G M       + MIQ   +PD  TY++++D
Sbjct: 471 AKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIID 530

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G+  +  +  A  +F  MV   C+ +V +Y +LIN  C    +  A   +++MLS R++P
Sbjct: 531 GYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKP 590

Query: 398 SVITYNTLLSGLFQVG-NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN-GFVLE--- 452
           +V+TY T+L G F  G NL  A    ++M +   +P+  T+   ++GL  N  FV+    
Sbjct: 591 NVVTY-TILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQR 649

Query: 453 --------AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
                    ++ F  + +   + R  +YN ++  LC+   +K A  L  ++  KG +PD 
Sbjct: 650 SEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDP 709

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           V+   ++H LC EG+    N+++     +  +   V +   L  F+   + S+  ++LH 
Sbjct: 710 VSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEASLILHS 769

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           +A +       SL  + VD L    K R
Sbjct: 770 LADQ------FSLQMEEVDNLEASSKTR 791



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 146/534 (27%), Positives = 261/534 (48%), Gaps = 39/534 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKR-LNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           P   +F++++++ A     D  +  ++  +  +   PD+F  N L+N L K G    A  
Sbjct: 99  PTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACK 158

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V   ++      +  T   ++ GLC EG++ +  +L +K     C PN+V +NTLI+G C
Sbjct: 159 VYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYC 218

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  +T  A  LF+E+  + G +  P V TY +II+G CK G  +   +LL++M +R ++ 
Sbjct: 219 KKGDTERANVLFKELKMK-GFL--PTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDV 275

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           ++  YN++I          EA      M+ +G  PD+ T+N +I  +C  G++ K  +LL
Sbjct: 276 SIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLL 335

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E  I+RG+ P+ V+Y  L+  +C  G   RA +L + M  +G + D+ +Y  LI+     
Sbjct: 336 EQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVA 395

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            +V+ A+ +  +M+ + + P    YN L+SGL + G L  A  L+ +M   +V PD+F  
Sbjct: 396 GEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFIT 455

Query: 438 ATYIDGLCKNGFVLEAVQVFQ---------------AIRNCKCELRIE------------ 470
           AT +DG  ++G   EA ++F+               A+    C+  +             
Sbjct: 456 ATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQ 515

Query: 471 --------TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                   TY+ +I+G  KM  L  A ++F  +      P+VVT + +I+  C  G +++
Sbjct: 516 GLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINR 575

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           A      M +    P+ VT+  L+  F +    +K      +M  EK + +D++
Sbjct: 576 AEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVT 629



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 173/380 (45%), Gaps = 4/380 (1%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQ-MKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           P    ++ +I      G VD+A E     +K  +  P+V + NSL+         + A  
Sbjct: 99  PTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACK 158

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           ++ EM+D   + D  T   M+   CK+GK++   +L+E    RG  P+ V YN+L+DG+C
Sbjct: 159 VYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYC 218

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G   RA  LF  +  KG    V +Y  +IN  CK  K E    L  EM    +  S+ 
Sbjct: 219 KKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIH 278

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QA 459
            YN ++   F+ G   +A   +  M  +   PD  T+   I G C  G V +A Q+  QA
Sbjct: 279 IYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQA 338

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           I+      ++ +Y  LI+  CK G    A  L  ++  +G  PD+VT + +IH L   G+
Sbjct: 339 IKRGLLPNKV-SYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGE 397

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +D A  +   M  K  +P    +  L+ G  +  +     VLL +M  +  V  D  +++
Sbjct: 398 VDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQN-VAPDAFITA 456

Query: 580 KVVDLLSKDKKYRECLNQFR 599
            +VD   +   + E    F 
Sbjct: 457 TLVDGFIRHGDFEEAKKLFE 476



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 167/349 (47%), Gaps = 6/349 (1%)

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFC---CVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
           + + LL  MK +++ P    ++ +I  F     VD   E    FI++  +   PDV + N
Sbjct: 84  EVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKI--HHCVPDVFSCN 141

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           +++N   K GK++   ++ + M+ R    D  T   ++ G C  G++    +L      +
Sbjct: 142 SLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGR 201

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  ++  YN LI+  CK    E A  L++E+  +   P+V TY  +++G  + G     
Sbjct: 202 GCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVV 261

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            KL+ +M    +      +   ID   K+G  +EA      +    C+  + TYN LI G
Sbjct: 262 DKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITG 321

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            C  G +  A +L  +   +G +P+ V+ + +IH  CK+G+  +A DLL+ M  +   P 
Sbjct: 322 SCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPD 381

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            VT+  L+ G +   +    + + +KM  EK V+ D ++ + ++  L K
Sbjct: 382 LVTYAALIHGLIVAGEVDVALTVRNKM-VEKGVLPDANIYNVLMSGLCK 429



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 118/303 (38%), Gaps = 53/303 (17%)

Query: 24  CSFGRPPNPKTDLSS----HHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           C  GR P  K  L+     +   D    A  ++   + G+    EA   F+  I+    P
Sbjct: 428 CKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDF--EEAKKLFELTIEKGIDP 485

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
           G+  +  ++    K       +  FKR+      PD F  + +I+   KM    GA  + 
Sbjct: 486 GVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMF 545

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-------NVFA----------- 181
           G +++    PN VT+  LING C  G I  A + FK++       NV             
Sbjct: 546 GLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKG 605

Query: 182 -----------------CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN-----EFGAI 219
                            C PN VT+N L+NGL    + +++ +  E+  N      FG +
Sbjct: 606 VNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMM 665

Query: 220 CKPD----VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC---V 272
                     +YNSI+  LC+   V  A  L  +M  +   P+ ++  +L+ G C     
Sbjct: 666 ISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRS 725

Query: 273 DDW 275
            DW
Sbjct: 726 QDW 728


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 271/566 (47%), Gaps = 35/566 (6%)

Query: 24  CSFGRPPNPKT-DLSSHHFKDGTSIAKFLND-------RHKSGNITSNEAVYFFDCMIKM 75
           CS G  P P T +L+   + +  S    LN        R   G     +A      M+  
Sbjct: 424 CSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGN 483

Query: 76  KPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
              P  ++++ ++  L    + +    LFK +   G+ PD++   +LI+C  K GI   A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
              L  ++R    P  VT+  LI+      ++  A  LF+ +    C PNV+T+  LI+G
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603

Query: 196 LCRTRNTLVALKLFEEM--------VNEFGAIC-----KPDVVTYNSIIDGLCKDGFVDK 242
            C++ N   A +++  M        V+ +  I      KP+VVTY +++DGLCK   V  
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++LL  M      PN I Y++LI GFC      EA+ +F +M++ G  P+V T++++I+
Sbjct: 664 ARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLID 723

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              KD ++D V ++L  M++    P+ V Y  ++DG   V +   A +L + M  KGC+ 
Sbjct: 724 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 783

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V +Y  +I+   K  KV+  + L+REM S+   P+ +TY  L++     G+L +A  L+
Sbjct: 784 NVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 843

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+         ++   I+G  K  F+L ++ + + +        I  Y  LI+   K 
Sbjct: 844 EEMKQTYWPKHVSSYCKVIEGY-KREFIL-SLGLLEEVEKNGSAPTILLYKVLIDNFVKA 901

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTC-------STMIHWLCKEGQMDKANDLLLDMEAKNC 535
           GRL+ A +L     HK  I   ++        +++I+      ++D A +L  DM     
Sbjct: 902 GRLEVALEL-----HKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGV 956

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVL 561
           +P   TF  LL G ++  +  + + L
Sbjct: 957 IPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 157/583 (26%), Positives = 259/583 (44%), Gaps = 70/583 (12%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  L+ +  +  + DT   + + ++  GL  D F L      LCK+G    A   
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA--- 295

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT---------- 188
           L  I +  F PNT+ +N +I+GLC      EA     ++   +C PNV T          
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355

Query: 189 -------------------------FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
                                    FN+L++  C++ +   A KL ++M       CKP 
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEK---CECKPG 412

Query: 224 VVTYNSIIDGLCKDG---------FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
            V YN +I  +C  G           +KA   +L         NV+++   +CGF     
Sbjct: 413 YVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GK 469

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           +++A  +  EMM NG  PD  T++ +I + C   +++    L + M   GV PD  TY  
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L+D F   G I +A      MV  GC   V +Y  LI+A  K +KV  A  L+  M+++ 
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD----------------SFTFA 438
             P+VITY  L+ G  + GN+  A ++  +M+ +  +PD                  T+ 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +DGLCK   V +A  + + +    CE     Y+ LI+G CK  +L  A ++FH++  +
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVER 709

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P+V T S++I  L K+ ++D    +L  M   +C P+ V +  ++ G  +  K  + 
Sbjct: 710 GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEA 769

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             L+  M  EK    ++   + ++D   K  K  +CL  FR +
Sbjct: 770 YKLM-LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 239/525 (45%), Gaps = 25/525 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+ F + M      P + ++ ILL      KQ      +   + + G +P   + N L
Sbjct: 325 EEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSL 384

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME------AARLFKK 176
           ++  CK    S A+ +L ++ +    P  V +N LI  +C+ G +        A + + +
Sbjct: 385 VHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNE 444

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +       N V   +    LC       A K+  EM+   G    PD  TY+ +I  LC 
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMM---GNGFVPDTSTYSEVIGFLCN 501

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              V+ A  L  +MK   + P+V TY  LI  F      K+A     EM+ +G +P VVT
Sbjct: 502 ASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVT 561

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +I+   K  K+   N L ELMI +G  P+ +TY +L+DG+C  G I +A +++  M 
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621

Query: 357 SKG----------------CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                               + +V +Y  L++  CK  KV+DA  L   M  +   P+ I
Sbjct: 622 GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTI 681

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y+ L+ G  +   L +A ++  KM      P+ +T+++ ID L K+  +   ++V   +
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
               C   I  Y  +I+GL K+ +   A KL   ++ KG  P+VVT + MI    K G++
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           DK  +L  +M +K C P+ VT+  L+          +   LL +M
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 229/532 (43%), Gaps = 68/532 (12%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +LN+LI   C+ G+ + A   LGR+    + P  +T+N L+       ++  A  + +++
Sbjct: 208 LLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREM 267

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           +      +  T       LC+      AL L E+   +F     P+ + YN +I GLC+ 
Sbjct: 268 SELGLSMDEFTLGFFAQALCKVGKWREALSLIEK--EDF----VPNTILYNKMISGLCEA 321

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC--LFIEMMDNGVQPDVV 295
            F ++A + L +M+  +  PNV TY  L+CG  C++  +  +C  +   M+  G  P   
Sbjct: 322 SFFEEAMDFLNRMRSTSCIPNVQTYRILLCG--CLNKKQLGRCKRILSMMIAEGCYPSYT 379

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL-------------- 341
            FN++++  CK        +LL+ M +    P  V YN L+   C               
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439

Query: 342 ---------------------------VGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
                                       G+  +A ++   M+  G   D  +Y+ +I   
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   +VE+A  L++EM    + P V TY  L+    + G +  A   +D+M  +   P  
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+ T I    K   V  A ++F+ +    C   + TY  LI+G CK G ++ AC+++ R
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619

Query: 495 LQHKGPIPD----------------VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           ++    IPD                VVT   ++  LCK  ++  A DLL  M    C P+
Sbjct: 620 MRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPN 679

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            + +  L+ GF +  K  +   + HKM  E+    ++   S ++D L KDK+
Sbjct: 680 TIVYDALIDGFCKAAKLDEAQEVFHKM-VERGYNPNVYTYSSLIDRLFKDKR 730



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 207/456 (45%), Gaps = 56/456 (12%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G I   +A  + D M++    P + ++T L+    K K+      LF+ + + G FP+
Sbjct: 536 KAGII--KQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPN 593

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSC----------------FTPNTVTFNFLIN 159
           +     LI+  CK G    A  +  R+                      PN VT+  L++
Sbjct: 594 VITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVD 653

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
           GLC   ++ +A  L + + V  C+PN + ++ LI+G C+      A ++F +MV E G  
Sbjct: 654 GLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV-ERGY- 711

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             P+V TY+S+ID L KD  +D   ++L +M + +  PN++ Y  +I G   V    EA 
Sbjct: 712 -NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L + M + G +P+VVT+ AMI+   K GK+DK   L   M  +G  P+ VTY  L++  
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830

Query: 340 CLVGRISRARELFVSM--------VSKGCR-------------------------HDVYS 366
           C  G +  A  L   M        VS  C+                           +  
Sbjct: 831 CATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILL 890

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVIT--YNTLLSGLFQVGNLGDALKLIDK 424
           Y +LI+   K  ++E A+ L++E++S  +  +     Y +L+        +  A +L   
Sbjct: 891 YKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYD 950

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           M  + V+PD  TF   + GL +     EA+Q+  ++
Sbjct: 951 MIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 154/393 (39%), Gaps = 91/393 (23%)

Query: 56  KSGNITSNEAVY--------------FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVV 101
           KSGNI     +Y              +F     +   P + ++  L+  L K  +     
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
            L + +  +G  P+  V + LI+  CK      A  V  +++   + PN  T++ LI+ L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRL 725

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
             + R+    ++  K+   +C PN+V +  +I+GL +   T  A KL   M+ E G  CK
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLML-MMEEKG--CK 782

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+VVTY ++IDG  K G VDK  EL  +M  +   PN +TY  LI   C      EA  L
Sbjct: 783 PNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYAL 842

Query: 282 FIEMMD---------------------------------NGVQPDVVTFNAMINYNCKDG 308
             EM                                   NG  P ++ +  +I+   K G
Sbjct: 843 LEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAG 902

Query: 309 KMD----------------------------------KVNRLLEL---MIQRGVNPDTVT 331
           +++                                  K++   EL   MI+ GV PD  T
Sbjct: 903 RLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGT 962

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           +  L+ G   V R   A +L  S+    C+ D+
Sbjct: 963 FVHLLMGLIRVRRWEEALQLSDSL----CQMDI 991


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 234/468 (50%), Gaps = 10/468 (2%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + +++    +++  +  +S F  +  NG  P     N L+  +    + S +F       
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFV----VGSSSFNQWWSFF 152

Query: 144 ---RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
              +S    +  +F  LI G C  G I ++  L  +L  F   PNVV + TLI+G C+  
Sbjct: 153 NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A  LF EM  + G +      TY  +I+GL K+G   +  E+  +M++  + PN+ 
Sbjct: 213 EIEKAKDLFFEM-GKLGLVANER--TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TYN ++   C     K+A  +F EM + GV  ++VT+N +I   C++ K+++ N++++ M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
              G+NP+ +TYN+L+DGFC VG++ +A  L   + S+G    + +YNIL++  C+    
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
             A  + +EM    I+PS +TY  L+    +  N+  A++L   M+   +VPD  T++  
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I G C  G + EA ++F+++    CE     YN +I G CK G    A KL   ++ K  
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            P+V +   MI  LCKE +  +A  L+  M      PS      + R 
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 221/446 (49%), Gaps = 4/446 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N ++ +F+ M+     PG   F  LLT +  +  ++   S F   N + +  D++   +L
Sbjct: 111 NLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGIL 169

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+ G    +F +L  +    F+PN V +  LI+G C +G I +A  LF ++     
Sbjct: 170 IKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL 229

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N  T+  LINGL +        +++E+M  E G    P++ TYN +++ LCKDG    
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKM-QEDGVF--PNLYTYNCVMNQLCKDGRTKD 286

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++  +M++R ++ N++TYN+LI G C      EA  +  +M  +G+ P+++T+N +I+
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C  GK+ K   L   +  RG++P  VTYN L+ GFC  G  S A ++   M  +G + 
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
              +Y ILI+   +   +E A+ L   M    + P V TY+ L+ G    G + +A +L 
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M   +  P+   + T I G CK G    A+++ + +   +    + +Y  +I  LCK 
Sbjct: 467 KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCS 508
            + K A +L  ++   G  P     S
Sbjct: 527 RKSKEAERLVEKMIDSGIDPSTSILS 552



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 248/497 (49%), Gaps = 10/497 (2%)

Query: 94  NKQYDTVVSLFKRLNSNGLFPDLFVL-NLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           + Q+ T  SL   L  +      F L  ++IN   +    + +      ++ + F P + 
Sbjct: 71  HSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSN 130

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            FN+L+  +       +    F + N      +V +F  LI G C       +  L  E+
Sbjct: 131 CFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIEL 189

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
             EFG    P+VV Y ++IDG CK G ++KAK+L  +M    +  N  TY  LI G    
Sbjct: 190 T-EFG--FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKN 246

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
              K+   ++ +M ++GV P++ T+N ++N  CKDG+     ++ + M +RGV+ + VTY
Sbjct: 247 GVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTY 306

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N+L+ G C   +++ A ++   M S G   ++ +YN LI+  C   K+  A+ L R++ S
Sbjct: 307 NTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
             + PS++TYN L+SG  + G+   A K++ +M+   + P   T+   ID   ++  + +
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A+Q+  ++        + TY+ LI+G C  G++  A +LF  +  K   P+ V  +TMI 
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             CKEG   +A  LL +ME K   P+  ++  ++    +  K  +   L+     EK++ 
Sbjct: 487 GYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV-----EKMID 541

Query: 573 SDLSLSSKVVDLLSKDK 589
           S +  S+ ++ L+S+ K
Sbjct: 542 SGIDPSTSILSLISRAK 558



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 222/441 (50%), Gaps = 40/441 (9%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +  +IN   ++++  +++  F EMV+  G +  P    +N ++  +      ++      
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDN-GFV--PGSNCFNYLLTFVVGSSSFNQWWSFFN 153

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           + K + +  +V ++  LI G C   + +++  L IE+ + G  P+VV +  +I+  CK G
Sbjct: 154 ENKSKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +++K   L   M + G+  +  TY  L++G    G   +  E++  M   G   ++Y+YN
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            ++N  CKD + +DA  ++ EM    +  +++TYNTL+ GL +   L +A K++D+M+ +
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            + P+  T+ T IDG C  G + +A+ + + +++      + TYN L++G C+ G    A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392

Query: 489 CKLFHRLQHKG--P---------------------------------IPDVVTCSTMIHW 513
            K+   ++ +G  P                                 +PDV T S +IH 
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
            C +GQM++A+ L   M  KNC P+EV + T++ G+ +     + + LL +M  EK +  
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM-EEKELAP 511

Query: 574 DLSLSSKVVDLLSKDKKYREC 594
           +++    ++++L K++K +E 
Sbjct: 512 NVASYRYMIEVLCKERKSKEA 532



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 137/268 (51%), Gaps = 3/268 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A   FD M +   S  + ++  L+  L +  + +    +  ++ S+G+ P+L   N 
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+  C +G    A  +   +     +P+ VT+N L++G C +G    AA++ K++    
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ VT+  LI+   R+ N   A++L   M  E G +  PDV TY+ +I G C  G ++
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSM-EELGLV--PDVHTYSVLIHGFCIKGQMN 460

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  L   M ++N  PN + YN++I G+C       A  L  EM +  + P+V ++  MI
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDT 329
              CK+ K  +  RL+E MI  G++P T
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPST 548


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 226/449 (50%), Gaps = 14/449 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           +F  +L  LA+ +    +  ++  +     + PD+    +L+N LCK G    A  VL  
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 142 ILRSCF--TPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLINGLC 197
           + R      P+ VT N +++GLC  GR+ EA    ++   +V  C PN VT+N LI+  C
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  N  +A +L E+M NE       ++VT N+I+ GLC+ G    A E   +   R + P
Sbjct: 258 RVGNISMAYELVEKMENEG---VPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWP 312

Query: 258 ----NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
               N +TY++L+      ++   A  LF E M  G  PD + +  MI+   + G+++  
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             +   M + G   DT  YN L+ GFC   R+  A EL   M   G R DV +YN L++ 
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
           +CK         L  +M+ +  +PSVIT+ TL+ G  +VG + +AL+++  M  + + P+
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           +  + T ID LCK G V  A+++F  ++       + T+N L+ GL      + A +L  
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMD 552

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
           +++ +   PD VT   ++ WL   G+ D+
Sbjct: 553 QMREERCFPDYVTVDVLMEWLPVIGETDR 581



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 236/473 (49%), Gaps = 20/473 (4%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT--PNTVTFNFLINGLCAEGRIMEAAR 172
           D+F  N ++  L ++    G   +   +++ C +  P+ VT+  L+NGLC  GR+ +A R
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYA-LMQGCASVRPDVVTYGILVNGLCKAGRVGDALR 193

Query: 173 LFKKLNVFACD--PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
           +   ++    D  P+VVT NT+++GLC++     AL   E+ ++     C P+ VTYN +
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHG-CPPNTVTYNCL 252

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC-------CVDDWKEAKCLFI 283
           ID  C+ G +  A EL+ +M++  +  N++T N+++ G C        ++ ++E + ++ 
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           E   N V     T++ ++        +     L    +  G +PD + Y +++ G    G
Sbjct: 313 EGKGNAV-----TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAG 367

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           R+  A  +  SM   G + D  +YNILI   C+ +++ +A  L +EM    IRP V TYN
Sbjct: 368 RLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYN 427

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TLLSG  + G+     +L+ KM  +   P   TF T + G CK G + EA+++ +++   
Sbjct: 428 TLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDES 487

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                   YN LI+ LCK G +  A +LF  ++ K    +V T + ++  L  +   +KA
Sbjct: 488 GIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGF--VQNNKKSKVVVLLHKMAAEKLVVSD 574
            +L+  M  + C P  VT   L+     +    + K  +   +  A K +VSD
Sbjct: 548 FELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASKRIVSD 600



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 207/424 (48%), Gaps = 10/424 (2%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V  FN+++  L R R+     +++  M  +  A  +PDVVTY  +++GLCK G V  A 
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALM--QGCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 245 ELL--LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD--NGVQPDVVTFNAM 300
            +L  +  +D +I P+V+T N+++ G C     +EA     + M   +G  P+ VT+N +
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS--MVSK 358
           I+  C+ G +     L+E M   GV  + VT N+++ G C  GR   A E F     V  
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
             + +  +Y+ L+ A      V  A+ L+ E +SE   P  I Y T++SGL Q G L DA
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             +   M+      D+  +   I G C+   + EA ++ Q ++       + TYN L++G
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK G      +L  ++   G  P V+T  T++H  CK G++D+A  +L  M+     P+
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD--KKYRECLN 596
            V + TL+    +       + L  +M  + +  +  + ++ +  L  K+  +K  E ++
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMD 552

Query: 597 QFRH 600
           Q R 
Sbjct: 553 QMRE 556



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 199/395 (50%), Gaps = 11/395 (2%)

Query: 56  KSGNITSNEAVYFFDCMIK--MKPSPGMTSFTILLTMLAKNKQYDTVVSLF-KRLNS-NG 111
           K+G +   +A+   D M +  +   P + +   ++  L K+ +    ++   +R++S +G
Sbjct: 184 KAGRV--GDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHG 241

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
             P+    N LI+  C++G  S A+ ++ ++       N VT N ++ GLC  GR   A 
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301

Query: 172 RLFKKLNVFACDP--NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
             F++      +   N VT++TL+  L  T N  +A++LF E ++E  +   PD + Y +
Sbjct: 302 EFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHS---PDAIMYFT 358

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I GL + G ++ A  +   MK+     +   YN LI GFC      EA  L  EM + G
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++PDV T+N +++ +CK G    V+ LL  MI  G  P  +T+ +L+ G+C VG+I  A 
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            +  SM   G   +   YN LI+  CK   V+ A+ L+ EM  + +  +V T+N LL GL
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
                   A +L+D+M+     PD  T    ++ L
Sbjct: 539 RDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 3/187 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA      M ++   P + ++  LL+   K   +  V  L  ++  +G  P +     L
Sbjct: 405 HEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTL 464

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK+G    A  +L  +  S   PN V +N LI+ LC  G +  A  LF ++   + 
Sbjct: 465 VHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSV 524

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             NV TFN L+ GL        A +L ++M  E    C PD VT + +++ L   G  D+
Sbjct: 525 PANVTTFNALLKGLRDKNMPEKAFELMDQMREER---CFPDYVTVDVLMEWLPVIGETDR 581

Query: 243 AKELLLQ 249
            K  + Q
Sbjct: 582 LKRFMQQ 588


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 253/545 (46%), Gaps = 61/545 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+ F + M      P + +++ LL      KQ      +   +   G +P   + N L
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC----------------AEGR 166
           ++  C  G  S A+ +L ++++   TP  V +N LI  +C                A   
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSE 438

Query: 167 IMEAARLFKKLNVFA-----CD--------------------PNVVTFNTLINGLCRTRN 201
           ++    +  K+NV +     C                     P+  T++ ++  LC    
Sbjct: 439 MLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASK 498

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
             +A  LFEEM  + G +   DV TY  ++D  CK G +++A++   +M++    PNV+T
Sbjct: 499 MELAFLLFEEM--KRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y +LI  +        A  LF  M+  G  P++VT++A+I+ +CK G+M+K  ++ E M 
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMC 615

Query: 322 -----------------QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
                                 P+ V Y +L+DGFC + R+  AR+L  +M  +GC  + 
Sbjct: 616 GSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQ 675

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y+ LI+  CK  K+++A  +  EM       ++ TY++L+   F+V     A K++ K
Sbjct: 676 IVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 735

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  N   P+   +   IDGLCK G   EA ++ Q +    C+  + TY  +I+G  ++G+
Sbjct: 736 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGK 795

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           ++T  +L  R+  KG  P+ VT   +I   CK G +D A++LL +M+  +       +  
Sbjct: 796 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRK 855

Query: 545 LLRGF 549
           ++ GF
Sbjct: 856 VIEGF 860



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 252/534 (47%), Gaps = 58/534 (10%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           ++SFT  L    K   Y+   S+ + +   G  PD    + ++  LC       AF++  
Sbjct: 451 VSSFTRCLCSAGK---YEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFE 507

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            + R     +  T+  +++  C  G I +A + F ++    C PNVVT+  LI+   + +
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM---------- 250
               A +LFE M++E    C P++VTY+++IDG CK G ++KA ++  +M          
Sbjct: 568 KVSYANELFETMLSEG---CLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVD 624

Query: 251 -------KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
                   D +  PNV+ Y +L+ GFC +   +EA+ L   M   G +P+ + ++A+I+ 
Sbjct: 625 MYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 684

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK GK+D+   +   M + G      TY+SL+D +  V R   A ++   M+   C  +
Sbjct: 685 LCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 744

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V  Y  +I+  CK  K ++A  L + M  +  +P+V+TY  ++ G  ++G +   L+L++
Sbjct: 745 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLE 804

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFV--------------------------------- 450
           +M    V P+  T+   ID  CKNG +                                 
Sbjct: 805 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEF 864

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ-HKGPIPDVV-TCS 508
           +E++ +   I        +  Y  L++ L K  RL+ A +L   +      + D   T +
Sbjct: 865 IESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYN 924

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           ++I  LC   ++DKA  L  +M  K  +P   TFC+L++G  +N+K S+ ++LL
Sbjct: 925 SLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 235/522 (45%), Gaps = 65/522 (12%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           + +    PD      LI+ LC+  +   A   L R+  +   PN VT++ L+ G   + +
Sbjct: 293 METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 352

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC--KPDV 224
           +    R+   + +  C P+   FN+L++  C + +   A KL ++MV      C   P  
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK-----CGHTPGY 407

Query: 225 VTYNSIIDGLCKD-----------------------------------------GFVDKA 243
           V YN +I  +C D                                         G  +KA
Sbjct: 408 VVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKA 467

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             ++ +M  +   P+  TY+ ++   C     + A  LF EM   G+  DV T+  M++ 
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G +++  +    M + G  P+ VTY +L+  +    ++S A ELF +M+S+GC  +
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSER-----------------IRPSVITYNTLL 406
           + +Y+ LI+ +CK  ++E A  ++  M   +                  RP+V+ Y  LL
Sbjct: 588 IVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALL 647

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            G  ++  + +A KL+D M +    P+   +   IDGLCK G + EA +V   +      
Sbjct: 648 DGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFP 707

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + TY+ LI+   K+ R   A K+  ++      P+VV  + MI  LCK G+ D+A  L
Sbjct: 708 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 767

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +  ME K C P+ VT+  ++ GF +  K    + LL +M ++
Sbjct: 768 MQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSK 809



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 214/475 (45%), Gaps = 33/475 (6%)

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           LN+L+   C+ G  S A   LGR+    F P+  T+N LI        +  A+ + ++++
Sbjct: 203 LNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMS 262

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
           +     +  T       LC+      AL L E     F     PD V Y  +I GLC+  
Sbjct: 263 LANLRMDGFTLRCYAYSLCKVGKWREALTLME--TENF----VPDTVFYTKLISGLCEAS 316

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC--LFIEMMDNGVQPDVVT 296
             ++A + L +M+  +  PNV+TY++L+CG  C++  +  +C  +   MM  G  P    
Sbjct: 317 LFEEAMDFLNRMRATSCLPNVVTYSTLLCG--CLNKKQLGRCKRVLNMMMMEGCYPSPKI 374

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC------LVGRISRARE 350
           FN++++  C  G      +LL+ M++ G  P  V YN L+   C          +  A +
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEK 434

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
            +  M++ G   +  + +      C   K E A  + REM+ +   P   TY+ +L  L 
Sbjct: 435 AYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLC 494

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
               +  A  L ++M+   +V D +T+   +D  CK G + +A + F  +R   C   + 
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  LI+   K  ++  A +LF  +  +G +P++VT S +I   CK GQM+KA  +   M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERM 614

Query: 531 EAKNCVP-------------SE----VTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
                VP             SE    V +  LL GF + ++  +   LL  M+ E
Sbjct: 615 CGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSME 669



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 206/463 (44%), Gaps = 55/463 (11%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G I   +A  +F+ M ++  +P + ++T L+    K K+      LF+ + S G  P+
Sbjct: 530 KAGLI--EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRS-----------------CFTPNTVTFNFLI 158
           +   + LI+  CK G    A  +  R+  S                    PN V +  L+
Sbjct: 588 IVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALL 647

Query: 159 NGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-FG 217
           +G C   R+ EA +L   +++  C+PN + ++ LI+GLC+      A ++  EM    F 
Sbjct: 648 DGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFP 707

Query: 218 AI-------------------------------CKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           A                                C P+VV Y  +IDGLCK G  D+A +L
Sbjct: 708 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 767

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           +  M+++   PNV+TY ++I GF  +   +    L   M   GV P+ VT+  +I++ CK
Sbjct: 768 MQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 827

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G +D  + LLE M Q         Y  +++GF        +  L   +        +  
Sbjct: 828 NGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFN--KEFIESLGLLDEIGQDDTAPFLSL 885

Query: 367 YNILINANCKDQKVEDAVCLYREM--LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           Y +L++   K Q++E A+ L  E+   S  +     TYN+L+  L     +  A +L  +
Sbjct: 886 YRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSE 945

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           M    V+P+  TF + I GL +N  + EA+ +   I +  C L
Sbjct: 946 MSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMVCPL 988



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 103/453 (22%), Positives = 172/453 (37%), Gaps = 108/453 (23%)

Query: 227 YNSIIDGL-----------------------------------CKDGFVDKAKELLLQMK 251
           YN+++D +                                   C+ G    A E L ++K
Sbjct: 168 YNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLK 227

Query: 252 DRNINPNVITYNSLICGF-----------------------------------CCVDDWK 276
           D    P+  TYN LI  F                                   C V  W+
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWR 287

Query: 277 EA-------------------------KCLFIEMMD-------NGVQPDVVTFNAMINYN 304
           EA                           LF E MD           P+VVT++ ++   
Sbjct: 288 EALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
               ++ +  R+L +M+  G  P    +NSL+  +C  G  S A +L   MV  G     
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGY 407

Query: 365 YSYNILINANCKDQK------VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
             YNILI + C D+       +E A   Y EML+  +  + I  ++    L   G    A
Sbjct: 408 VVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKA 467

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             +I +M     +PD+ T++  +  LC    +  A  +F+ ++       + TY  +++ 
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK G ++ A K F+ ++  G  P+VVT + +IH   K  ++  AN+L   M ++ C+P+
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
            VT+  L+ G  +  +  K   +  +M   K V
Sbjct: 588 IVTYSALIDGHCKAGQMEKACQIFERMCGSKDV 620


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 239/472 (50%), Gaps = 8/472 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++++L+    KN   +     +  + + G+   ++ LN ++    K      AF +
Sbjct: 296 PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTM 355

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
               L S    N  TFN L++ LC EG++ EA  L+ ++      PNVV++N +I G CR
Sbjct: 356 FNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCR 414

Query: 199 TRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
             N   A K+++EM+ N F     P+ VT+  ++DG  K G ++ A  +  +MKD NI P
Sbjct: 415 KDNINAACKVYKEMLDNGF----TPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILP 470

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
              T   +I G C      E + LF + +  G  P  + +N +I+   K+G ++  + + 
Sbjct: 471 TDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVY 530

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + G+ P TVTY SL+DGFC    I  A +L   M  KG + D+ +Y  LI+  CK 
Sbjct: 531 REMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKR 590

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP-DSFT 436
           + ++ A  L  E+    + P+   YN++++G   + N+ +A+ L  KM +N+ +P D  T
Sbjct: 591 RDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM-VNEGIPCDLKT 649

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + + IDGL K+G +L A  +   + +         +  LINGLC  G+ + A K+   + 
Sbjct: 650 YTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMN 709

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            K  IP V+  +T+I    KEG + +A  L  +M  +  VP  +T+  L+ G
Sbjct: 710 GKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 250/533 (46%), Gaps = 39/533 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +FT ++T   K       + L   + + G   +L V   L+   C  G    A V+
Sbjct: 226 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVL 285

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  I  S   PN VT++ LI+G C  G I +A   + ++       +V + N+++ G  +
Sbjct: 286 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 345

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            ++   A  +F + +    A    +V T+N+++  LCK+G +++A  L  ++  + I+PN
Sbjct: 346 CQSWQNAFTMFNDALESGLA----NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPN 401

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V++YN++I G C  D+   A  ++ EM+DNG  P+ VTF  +++   K G ++    +  
Sbjct: 402 VVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFH 461

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M    + P   T   ++ G C  GR    R+LF   VS+G       YN +I+   K+ 
Sbjct: 462 RMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEG 521

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +  A  +YREM    I PS +TY +L+ G  +  N+  ALKL++ M+   +  D   + 
Sbjct: 522 NINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYG 581

Query: 439 TYIDGLCK------------------------------NGF-----VLEAVQVFQAIRNC 463
           T IDG CK                               GF     V EA+ +++ + N 
Sbjct: 582 TLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE 641

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                ++TY  LI+GL K GRL  A  +   +  KG +PD    + +I+ LC +GQ + A
Sbjct: 642 GIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 701

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
             +L DM  KN +PS + + TL+ G  +     +   L  +M    LV  +++
Sbjct: 702 RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNIT 754



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 243/491 (49%), Gaps = 13/491 (2%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
           F +  + G+  D    ++ ++ LC    +  A  +L  +  + + P   TF  +I     
Sbjct: 181 FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 240

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           EG + EA RL   +       N+    +L+ G C   N   AL L  E ++E G +  P+
Sbjct: 241 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE-ISESGLV--PN 297

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
            VTY+ +IDG CK+G ++KA E   +MK + I  +V + NS++ G+     W+ A  +F 
Sbjct: 298 KVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFN 357

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           + +++G+  +V TFN ++++ CK+GKM++   L + +I +G++P+ V+YN+++ G C   
Sbjct: 358 DALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKD 416

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            I+ A +++  M+  G   +  ++ IL++   K   +E+A  ++  M    I P+  T  
Sbjct: 417 NINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLG 476

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            ++ GL + G   +   L +K      VP    + T IDG  K G +  A  V++ +   
Sbjct: 477 IIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM--- 533

Query: 464 KCELRIE----TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
            CE+ I     TY  LI+G CK   +  A KL + ++ KG   D+    T+I   CK   
Sbjct: 534 -CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRD 592

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           M  A++LL ++      P+   + +++ GF   N   + + L  KM  E  +  DL   +
Sbjct: 593 MKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG-IPCDLKTYT 651

Query: 580 KVVDLLSKDKK 590
            ++D L K  +
Sbjct: 652 SLIDGLLKSGR 662



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 191/381 (50%), Gaps = 3/381 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   +D +I    SP + S+  ++    +    +    ++K +  NG  P+     +L
Sbjct: 384 NEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTIL 443

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++   K G    AF +  R+  +   P   T   +I GLC  GR  E   LF K      
Sbjct: 444 MDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGF 503

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P  + +NT+I+G  +  N  +A  ++ EM  E G    P  VTY S+IDG CK   +D 
Sbjct: 504 VPTCMPYNTIIDGFIKEGNINLASNVYREMC-EVGIT--PSTVTYTSLIDGFCKGNNIDL 560

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL  MK + +  ++  Y +LI GFC   D K A  L  E+   G+ P+   +N+MI 
Sbjct: 561 ALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMIT 620

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                  +++   L + M+  G+  D  TY SL+DG    GR+  A ++   M+SKG   
Sbjct: 621 GFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILP 680

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  ++ +LIN  C   + E+A  +  +M  + + PSV+ YNTL++G F+ GNL +A +L 
Sbjct: 681 DDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLH 740

Query: 423 DKMQLNDVVPDSFTFATYIDG 443
           D+M    +VPD+ T+   ++G
Sbjct: 741 DEMLDRGLVPDNITYDILVNG 761



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 226/456 (49%), Gaps = 18/456 (3%)

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
           T  +NF ++    EG I+EA + F +      + +   ++  ++ LC   N+  AL L  
Sbjct: 160 TKLYNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLR 217

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN----PNVITYNSLI 266
           EM     A   P   T+ S+I    K+G V +A    L++KD  +N     N+    SL+
Sbjct: 218 EMR---AAGWIPPEGTFTSVITACVKEGNVAEA----LRLKDDMVNCGKSMNLAVATSLM 270

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G+C   + + A  L  E+ ++G+ P+ VT++ +I+  CK+G ++K       M  +G+ 
Sbjct: 271 KGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIR 330

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
               + NS+++G+        A  +F   +  G   +V+++N L++  CK+ K+ +A  L
Sbjct: 331 SSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNL 389

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + E++++ I P+V++YN ++ G  +  N+  A K+  +M  N   P++ TF   +DG  K
Sbjct: 390 WDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFK 449

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G +  A  +F  +++        T   +I GLCK GR      LF++   +G +P  + 
Sbjct: 450 KGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP 509

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
            +T+I    KEG ++ A+++  +M      PS VT+ +L+ GF + N     + LL+ M 
Sbjct: 510 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 569

Query: 567 AEKLVVSDLSLSSKVVDLLSKD---KKYRECLNQFR 599
            + L + D+     ++D   K    K   E LN+ R
Sbjct: 570 RKGLKM-DIKAYGTLIDGFCKRRDMKSAHELLNELR 604



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 178/375 (47%), Gaps = 4/375 (1%)

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN  +D   ++G + +A++  LQ K R +  +   Y+  +   C   +   A  L  EM 
Sbjct: 163 YNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMR 220

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G  P   TF ++I    K+G + +  RL + M+  G + +     SLM G+C+ G + 
Sbjct: 221 AAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLR 280

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  L   +   G   +  +Y++LI+  CK+  +E A   Y EM ++ IR SV + N++L
Sbjct: 281 SALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSIL 340

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            G  +  +  +A  + +   L   + + FTF T +  LCK G + EA  ++  +      
Sbjct: 341 EGYLKCQSWQNAFTMFND-ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGIS 399

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + +YN +I G C+   +  ACK++  +   G  P+ VT + ++    K+G ++ A  +
Sbjct: 400 PNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSI 459

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
              M+  N +P++ T   +++G  +  +  +   L +K  ++  V + +  ++ ++D   
Sbjct: 460 FHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNT-IIDGFI 518

Query: 587 KDKKYRECLNQFRHL 601
           K+       N +R +
Sbjct: 519 KEGNINLASNVYREM 533


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 232/459 (50%), Gaps = 10/459 (2%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + +++    +++  D+ +S F  +   G  P     N L+  +    + S +F    R  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFV----VGSSSFNQWWRFF 152

Query: 144 RSCFTP---NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
                    +  +F  +I G C  G I ++  L  +L  F   PNVV + TLI+G C+  
Sbjct: 153 NESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A  LF EM  +FG +   +  TY  +I GL K+G   +  E+  +M++  + PN+ 
Sbjct: 213 EIEKAKDLFFEM-GKFGLVA--NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLY 269

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TYN ++   C     K+A  LF EM + GV  ++VT+N +I   C++ K ++ N++++ M
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
              G+NP+ +TYN+L+DGFC VG++ +A  L   + S+G    + +YNIL++  CK    
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
             A  + +EM    I+PS ITY  L+    ++ N+  A++L   M+   + PD  T++  
Sbjct: 390 SGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I G C  G + EA ++F+ +   K E     YN ++ G CK G    A +LF  ++ K  
Sbjct: 450 IHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
            P+V +   MI  LCKE +  +A  L+  M      PS+
Sbjct: 510 PPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSD 548



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 234/469 (49%), Gaps = 9/469 (1%)

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           ++IN   +      +      ++   F P +  FN L+  +       +  R F +  + 
Sbjct: 99  VMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKI- 157

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
             D +V +F  +I G C       +  L  E+  EFG    P+VV Y ++IDG CK G +
Sbjct: 158 KVDLDVYSFGIVIKGCCEAGEIEKSFDLLVEL-REFG--FSPNVVIYTTLIDGCCKRGEI 214

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           +KAK+L  +M    +  N  TY  LI G       K+   ++ +M ++GV P++ T+N +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +N +CKDG+     +L + M +RGV+ + VTYN+L+ G C   + + A ++   M S G 
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             ++ +YN LI+  C   K+  A+ L R++ S  + PS++TYN L+SG  + G+   A K
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           ++ +M+   + P   T+   ID   +   + +A+Q+   +        + TY+ LI+G C
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFC 454

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
             G++  A +LF  +  K   P+ V  +TM+   CKEG   +A  L  +ME K   P+  
Sbjct: 455 IKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVA 514

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           ++  ++    +  K  +   L+     EK++ + +  S  +++L+S+ K
Sbjct: 515 SYRYMIEVLCKERKSKEAEGLV-----EKMIDTGIDPSDSILNLISRAK 558



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 207/415 (49%), Gaps = 17/415 (4%)

Query: 21  NFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKP--- 77
           N W  F      K DL  + F  G  I          G   + E    FD +++++    
Sbjct: 146 NQWWRFFNESKIKVDLDVYSF--GIVI---------KGCCEAGEIEKSFDLLVELREFGF 194

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP +  +T L+    K  + +    LF  +   GL  + +   +LI+ L K GI    F 
Sbjct: 195 SPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFE 254

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  ++      PN  T+N ++N  C +GR  +A +LF ++       N+VT+NTLI GLC
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLC 314

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R      A K+ ++M ++      P+++TYN++IDG C  G + KA  L   +K R ++P
Sbjct: 315 REMKANEANKVMDQMKSDG---INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +++TYN L+ GFC   D   A  +  EM + G++P  +T+  +I+   +   M+K  +L 
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLR 431

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + G+ PD  TY+ L+ GFC+ G+++ A  LF  MV+K    +   YN ++   CK+
Sbjct: 432 SPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKE 491

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
                A+ L+REM  + + P+V +Y  ++  L +     +A  L++KM    + P
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDP 546



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 221/441 (50%), Gaps = 40/441 (9%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +  +IN   ++++   ++  F EMV++ G +  P    +N+++  +      ++      
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDK-GFV--PGSNCFNNLLTFVVGSSSFNQWWRFFN 153

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           + K + ++ +V ++  +I G C   + +++  L +E+ + G  P+VV +  +I+  CK G
Sbjct: 154 ESKIK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +++K   L   M + G+  +  TY  L+ G    G   +  E++  M   G   ++Y+YN
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            ++N +CKD + +DA  L+ EM    +  +++TYNTL+ GL +     +A K++D+M+ +
Sbjct: 273 CVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSD 332

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            + P+  T+ T IDG C  G + +A+ + + +++      + TYN L++G CK G    A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392

Query: 489 CKLFHRLQHKG-----------------------------PI------PDVVTCSTMIHW 513
            K+   ++ +G                             P+      PDV T S +IH 
Sbjct: 393 GKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHG 452

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
            C +GQM++A+ L   M AK   P++V + T++ G+ +     + + L  +M  EK +  
Sbjct: 453 FCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREM-EEKELPP 511

Query: 574 DLSLSSKVVDLLSKDKKYREC 594
           +++    ++++L K++K +E 
Sbjct: 512 NVASYRYMIEVLCKERKSKEA 532



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 65/138 (47%), Gaps = 4/138 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+     M ++  +P + ++++L+       Q +    LFK + +  L P+  + N ++
Sbjct: 426 KAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMV 485

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CK G +  A  +   +      PN  ++ ++I  LC E +  EA  L +K+     D
Sbjct: 486 LGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGID 545

Query: 184 PNVVTFNTLINGLCRTRN 201
           P+    ++++N + R +N
Sbjct: 546 PS----DSILNLISRAKN 559


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 251/488 (51%), Gaps = 4/488 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M+     P + ++++L+    K +  +TV+ L + + ++G+ P+++   + I
Sbjct: 257 EALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICI 316

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L +      A+ +L  +      P+ +T   LI  LC  GRI +A  +F K+      
Sbjct: 317 RVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQK 376

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++       +   ++++  M  +       +VV Y ++ID LC+ G V +A
Sbjct: 377 PDRVTYITLLDKFADNGESQSVMEIWNAMKADG---YNDNVVAYTAVIDALCQVGRVFEA 433

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E+  +MK + I P   +YNSLI GF   D + +A  LF  M  +G +P+  T    INY
Sbjct: 434 LEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINY 493

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G+  K  +  ELM  +G+ PD V  N+++ G    GR+  A+ +F  + + G   D
Sbjct: 494 YGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPD 553

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y ++I    K  K ++AV ++ +M+     P V+  N+L+  L++ G   +A ++  
Sbjct: 554 TITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFY 613

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +++  ++ P   T+ T + GL + G V E + + + + +      + TYN +++ LCK G
Sbjct: 614 QLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNG 673

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A  + + +  KG IPD+ + +T+I+ L KE + ++A  +   M+ K  +P   T C
Sbjct: 674 AVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLC 732

Query: 544 TLLRGFVQ 551
           T+L  FV+
Sbjct: 733 TILPSFVK 740



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 150/583 (25%), Positives = 267/583 (45%), Gaps = 43/583 (7%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            KSG +   + V  F  +  M  SP   ++T+++   +K  ++D  V +F  +  N   PD
Sbjct: 531  KSGRLGMAKRV--FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 588

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            + V+N LI+ L K G    A+ +  ++      P   T+N L+ GL  EG++ E   L +
Sbjct: 589  VLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 648

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            ++      PN++T+NT+++ LC+      AL +   M  +    C PD+ +YN++I GL 
Sbjct: 649  EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG---CIPDLSSYNTVIYGLV 705

Query: 236  KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA----KCLFIE------- 284
            K+   ++A  +  QMK + + P+  T  +++  F  +   KEA    K  F++       
Sbjct: 706  KEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDR 764

Query: 285  -------------------------MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
                                     +  +G+  D      +I + CK  K  + + L++ 
Sbjct: 765  SSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKK 824

Query: 320  MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
                GV+  T +YNSL+ G      I  A  LF  M   GC  D ++YN+L++A  K  +
Sbjct: 825  FKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMR 884

Query: 380  VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            +E+ + +  EM  +    + +TYNT++SGL +   L  A+ L   +      P   T+  
Sbjct: 885  IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP 944

Query: 440  YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
             +DGL K G + +A  +F  +    C+     YN L+NG    G  +  C LF  +  +G
Sbjct: 945  LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 1004

Query: 500  PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
              PD+ + + +I  LCK GQ++        +      P  +T+  L+ G  ++ +  + V
Sbjct: 1005 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAV 1064

Query: 560  VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             L ++M  +K +V +L   + ++  L K  K  E    +  LL
Sbjct: 1065 SLFNEM-QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1106



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 243/543 (44%), Gaps = 40/543 (7%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD M +      + +F  +   L       +       +   G+  + +  N L+  L K
Sbjct: 192 FDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVK 251

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A  V   ++     P+  T++ L+        +     L +++      PNV +
Sbjct: 252 SGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYS 311

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +   I  L + R    A ++  EM NE    CKPDV+T+  +I  LC  G +  AK++  
Sbjct: 312 YTICIRVLGQARRFDEAYRILAEMENEG---CKPDVITHTVLIQVLCDAGRISDAKDVFW 368

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +MK  +  P+ +TY +L+  F    + +    ++  M  +G   +VV + A+I+  C+ G
Sbjct: 369 KMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVG 428

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ +   + + M Q+G+ P+  +YNSL+ GF    R   A ELF  M   G + + Y++ 
Sbjct: 429 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHV 488

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG------------ 416
           + IN   K  +   A+  Y  M S+ I P V+  N +L GL + G LG            
Sbjct: 489 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 548

Query: 417 -----------------------DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
                                  +A+K+   M  N+ VPD     + ID L K G   EA
Sbjct: 549 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEA 608

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
            Q+F  ++    E    TYN L+ GL + G++K    L   + H    P+++T +T++  
Sbjct: 609 WQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 668

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           LCK G ++ A D+L  M  K C+P   ++ T++ G V+  + ++   +  +M  +K+++ 
Sbjct: 669 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM--KKVLIP 726

Query: 574 DLS 576
           D +
Sbjct: 727 DYA 729



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 249/530 (46%), Gaps = 40/530 (7%)

Query: 55   HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
            +K+G    +EA   F  + +M   P   ++  LL  L +  +   V+ L + +  +   P
Sbjct: 600  YKAGR--GDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPP 657

Query: 115  DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
            +L   N +++CLCK G  + A  +L  +      P+  ++N +I GL  E R  EA  +F
Sbjct: 658  NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 717

Query: 175  KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG- 233
             ++      P+  T  T++    +      AL + +E   + G+  K D  + +S+++G 
Sbjct: 718  CQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGS--KTDRSSCHSLMEGI 774

Query: 234  ----------------------------------LCKDGFVDKAKELLLQMKDRNINPNV 259
                                              LCK     +A EL+ + K   ++   
Sbjct: 775  LKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 834

Query: 260  ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
             +YNSLICG    +    A+ LF EM + G  PD  T+N +++   K  +++++ ++ E 
Sbjct: 835  GSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 894

Query: 320  MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
            M ++G     VTYN+++ G     R+ +A +L+ +++S+G      +Y  L++   K  +
Sbjct: 895  MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 954

Query: 380  VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            +EDA  L+ EML    + +   YN LL+G    GN      L   M    + PD  ++  
Sbjct: 955  IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 1014

Query: 440  YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
             ID LCK G + + +  F+ +     E  + TYN LI+GL K  RL+ A  LF+ +Q KG
Sbjct: 1015 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 1074

Query: 500  PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
             +P++ T +++I  L K G+  +A  +  ++  K   P+  T+  L+RG+
Sbjct: 1075 IVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1124



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 260/561 (46%), Gaps = 8/561 (1%)

Query: 43   DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
            +G +   F+N   KSG   S +A+  ++ M      P + +   +L  LAK+ +      
Sbjct: 483  NGYTHVLFINYYGKSGE--SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 540

Query: 103  LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            +F  L + G+ PD     ++I C  K      A  +   ++ +   P+ +  N LI+ L 
Sbjct: 541  VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLY 600

Query: 163  AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
              GR  EA ++F +L     +P   T+NTL+ GL R       + L EEM   + +   P
Sbjct: 601  KAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM---YHSNYPP 657

Query: 223  DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
            +++TYN+I+D LCK+G V+ A ++L  M  +   P++ +YN++I G    + + EA  +F
Sbjct: 658  NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 717

Query: 283  IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL-ELMIQRGVNPDTVTYNSLMDGFCL 341
             + M   + PD  T   ++    K G M +   ++ E  +Q G   D  + +SLM+G   
Sbjct: 718  CQ-MKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILK 776

Query: 342  VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
                 ++ E    + S G   D +    LI   CK +K  +A  L ++  S  +     +
Sbjct: 777  KAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGS 836

Query: 402  YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
            YN+L+ GL     +  A  L  +M+     PD FT+   +D + K+  + E ++V + + 
Sbjct: 837  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 896

Query: 462  NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                E    TYN +I+GL K  RL+ A  L++ L  +G  P   T   ++  L K G+++
Sbjct: 897  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 956

Query: 522  KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
             A +L  +M    C  +   +  LL G        KV  L   M  ++ +  D+   + +
Sbjct: 957  DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM-VDQGINPDIKSYTII 1015

Query: 582  VDLLSKDKKYRECLNQFRHLL 602
            +D L K  +  + L  FR LL
Sbjct: 1016 IDTLCKAGQLNDGLTYFRQLL 1036



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 225/494 (45%), Gaps = 42/494 (8%)

Query: 59   NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
            N   N+A+     M      P ++S+  ++  L K ++Y+   S+F ++    L PD   
Sbjct: 672  NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYAT 730

Query: 119  LNLLINCLCKMGITSGAFVVLGR--------------------ILRSCFTPNTVTF---- 154
            L  ++    K+G+   A  ++                      IL+   T  ++ F    
Sbjct: 731  LCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEII 790

Query: 155  --------NF----LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                    +F    LI  LC + + +EA  L KK   F       ++N+LI GL      
Sbjct: 791  ASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLI 850

Query: 203  LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             +A  LF EM  E G  C PD  TYN ++D + K   +++  ++  +M  +      +TY
Sbjct: 851  DIAEGLFAEM-KELG--CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 907

Query: 263  NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            N++I G       ++A  L+  +M  G  P   T+  +++   K G+++    L   M++
Sbjct: 908  NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 967

Query: 323  RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
             G   +   YN L++G  + G   +   LF  MV +G   D+ SY I+I+  CK  ++ D
Sbjct: 968  YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 1027

Query: 383  AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
             +  +R++L   + P +ITYN L+ GL +   L +A+ L ++MQ   +VP+ +T+ + I 
Sbjct: 1028 GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLIL 1087

Query: 443  GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
             L K G   EA ++++ +     +  + TYN LI G    G   +A   + R+   G +P
Sbjct: 1088 HLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLP 1147

Query: 503  DVVTCSTMIHWLCK 516
            +  TC   IH L K
Sbjct: 1148 NSSTCH--IHELMK 1159



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 223/490 (45%), Gaps = 45/490 (9%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL---CRTRNTLVAL 206
            T + N++++ +   GR+ + A +F  +       NV TF  +  GL      R+  VAL
Sbjct: 168 TTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL 227

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE--------------------- 245
            + +E     G +   +  TYN ++  L K GF  +A E                     
Sbjct: 228 PVMKEA----GIVL--NAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLM 281

Query: 246 --------------LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
                         LL +M+   + PNV +Y   I        + EA  +  EM + G +
Sbjct: 282 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCK 341

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           PDV+T   +I   C  G++     +   M +    PD VTY +L+D F   G      E+
Sbjct: 342 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEI 401

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           + +M + G   +V +Y  +I+A C+  +V +A+ ++ EM  + I P   +YN+L+SG  +
Sbjct: 402 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 461

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
               GDAL+L   M ++   P+ +T   +I+   K+G  ++A+Q ++ +++      +  
Sbjct: 462 ADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVA 521

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
            N ++ GL K GRL  A ++FH L+  G  PD +T + MI    K  + D+A  +  DM 
Sbjct: 522 GNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMI 581

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
             NCVP  +   +L+    +  +  +   + +++    L  +D + ++ +   L ++ K 
Sbjct: 582 ENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAG-LGREGKV 640

Query: 592 RECLNQFRHL 601
           +E ++    +
Sbjct: 641 KEVMHLLEEM 650



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 142/315 (45%), Gaps = 5/315 (1%)

Query: 291 QPDVVTFNAMINYNCK----DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           +P VV   A  NY        G++  +  + ++M ++ V  +  T+ ++  G  + G + 
Sbjct: 162 RPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 221

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A      M   G   + Y+YN L+    K     +A+ +Y+ M+ + + PSV TY+ L+
Sbjct: 222 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLM 281

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
               +  ++   L L+ +M+ + V P+ +++   I  L +     EA ++   + N  C+
Sbjct: 282 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCK 341

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             + T+  LI  LC  GR+  A  +F +++     PD VT  T++      G+     ++
Sbjct: 342 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEI 401

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
              M+A     + V +  ++    Q  +  + + +  +M  + +V    S +S +   L 
Sbjct: 402 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 461

Query: 587 KDKKYRECLNQFRHL 601
            D ++ + L  F+++
Sbjct: 462 AD-RFGDALELFKYM 475



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 2/164 (1%)

Query: 50   FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
             LN    +GN  + +  + F  M+    +P + S+TI++  L K  Q +  ++ F++L  
Sbjct: 980  LLNGHRIAGN--TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLE 1037

Query: 110  NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
             GL PDL   NLLI+ L K      A  +   + +    PN  T+N LI  L   G+  E
Sbjct: 1038 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1097

Query: 170  AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
            A +++++L      PNV T+N LI G   + +T  A   +  M+
Sbjct: 1098 AGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMI 1141


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 242/513 (47%), Gaps = 8/513 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEAV     M     SP   +   +L +  ++   D   ++F  ++  G+ PD     L+
Sbjct: 187 NEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLM 246

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +    + G    A   L  +++  F P+  T   +++ LC  G +  A   F+K+     
Sbjct: 247 VIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGF 306

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN++ F +LI+GLC+  +   A ++ EEMV       KP+V T+ ++IDGLCK G+ +K
Sbjct: 307 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG---WKPNVYTHTALIDGLCKRGWTEK 363

Query: 243 AKELLLQMKDRNI-NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           A  L L++   +I  PNV TY S+I G+C  D    A+ LF  M + G+ P+V T+  +I
Sbjct: 364 AFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 423

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N +CK G  D+   L+ LM   G  P+  TYN+++D  C   R   A EL     S G  
Sbjct: 424 NGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLE 483

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  +Y ILI   CK   ++ A+  +  M        +   N L++   +   + ++ +L
Sbjct: 484 ADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 543

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
              +    +VP   T+ + I G CK G    A++ F  ++   C     TY  LI+GLCK
Sbjct: 544 FQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 603

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              +  ACKL+  +  +G  P  VT  T+ +  CK      A  +L  ++ K  +    T
Sbjct: 604 KSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLWIR---T 660

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
             TL+R    + KK  V  L  +   EK   +D
Sbjct: 661 VRTLVRKLC-SEKKVGVAALFFQKLLEKDSSAD 692



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 248/511 (48%), Gaps = 7/511 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +SG I   E V  FD M      P  +SF +++    ++ +          +   G  PD
Sbjct: 217 ESGLIDYAENV--FDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPD 274

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                L+++ LC+ G+ + A     +++   F PN + F  LI+GLC +G I +A  + +
Sbjct: 275 NATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLE 334

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      PNV T   LI+GLC+   T  A +LF ++V     I KP+V TY S+I G C
Sbjct: 335 EMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR--SDIYKPNVHTYTSMIGGYC 392

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+  +++A+ L  +MK++ + PNV TY +LI G C   ++  A  L   M D G +P++ 
Sbjct: 393 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIY 452

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+NA+I+  CK  +  +   LL      G+  D VTY  L+   C    I +A   F  M
Sbjct: 453 TYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRM 512

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              G   D+   NILI A C+ +K++++  L++ ++S  + P+  TY +++SG  + G+ 
Sbjct: 513 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDF 572

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             ALK    M+ +  VPDSFT+ + I GLCK   V EA ++++A+ +        T   L
Sbjct: 573 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 632

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
               CK     +A  +   L  K  I    T  T++  LC E ++  A      +  K+ 
Sbjct: 633 AYEYCKRNDSASAMIVLEPLDKKLWIR---TVRTLVRKLCSEKKVGVAALFFQKLLEKDS 689

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
               VT         ++ K + V  L  +++
Sbjct: 690 SADRVTLAAFTTACSESGKNNLVADLTERIS 720



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 197/424 (46%), Gaps = 4/424 (0%)

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           GR+ EA  +   +      P+ +T N ++     +     A  +F+EM      +C PD 
Sbjct: 184 GRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEM--SVRGVC-PDS 240

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
            ++  ++ G  +DG + +A   L  M  R   P+  T   ++   C       A   F +
Sbjct: 241 SSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRK 300

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+D G +P+++ F ++I+  CK G + +   +LE M++ G  P+  T+ +L+DG C  G 
Sbjct: 301 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 360

Query: 345 ISRARELFVSMV-SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
             +A  LF+ +V S   + +V++Y  +I   CK+ K+  A  L+  M  + + P+V TY 
Sbjct: 361 TEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 420

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL++G  + GN   A +L++ M      P+ +T+   ID LCK     EA ++     +C
Sbjct: 421 TLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSC 480

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             E    TY  LI   CK   +K A   F R+   G   D+   + +I   C++ +M ++
Sbjct: 481 GLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 540

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             L   + +   VP++ T+ +++ G+ +       +   H M     V    +  S +  
Sbjct: 541 ERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISG 600

Query: 584 LLSK 587
           L  K
Sbjct: 601 LCKK 604



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 194/388 (50%), Gaps = 25/388 (6%)

Query: 183 DPNVVTFN---TLINGLCRTRNTLVALKLFEEMV--NEFGAICKPDVVTYNSIIDGLCKD 237
           D N +T     T++  L     ++VAL  F   V   +F    +  +VT +S+I     +
Sbjct: 108 DANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLI----AN 163

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G + KA E++                 ++  F  +    EA  + ++M + G+ P  +T 
Sbjct: 164 GNLQKAHEVM---------------RCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITM 208

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N ++    + G +D    + + M  RGV PD+ ++  ++ G    G+I  A      M+ 
Sbjct: 209 NCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQ 268

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           +G   D  +  ++++A C++  V  A+  +R+M+    +P++I + +L+ GL + G++  
Sbjct: 269 RGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 328

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLI 476
           A +++++M  N   P+ +T    IDGLCK G+  +A ++F + +R+   +  + TY  +I
Sbjct: 329 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMI 388

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            G CK  +L  A  LF R++ +G  P+V T +T+I+  CK G  D+A +L+  M+ +   
Sbjct: 389 GGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFR 448

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           P+  T+  ++    + ++  +   LL+K
Sbjct: 449 PNIYTYNAVIDSLCKKSRAPEAYELLNK 476


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 253/544 (46%), Gaps = 60/544 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+ F + M      P + +++ LL      KQ      +   +   G +P   + N L
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC----------------AEGR 166
           ++  C  G  S A+ +L ++++    P  V +N LI  +C                A   
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438

Query: 167 IMEAARLFKKLNVFA-----CD--------------------PNVVTFNTLINGLCRTRN 201
           ++ A  +  K+NV +     C                     P+  T++ ++N LC    
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
             +A  LFEEM  + G +   DV TY  ++D  CK G +++A++   +M++    PNV+T
Sbjct: 499 MELAFLLFEEM--KRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y +LI  +        A  LF  M+  G  P++VT++A+I+ +CK G+++K  ++ E M 
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615

Query: 322 ----------------QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
                                P+ VTY +L+DGFC   R+  AR+L  +M  +GC  +  
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            Y+ LI+  CK  K+++A  +  EM       ++ TY++L+   F+V     A K++ KM
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
             N   P+   +   IDGLCK G   EA ++ Q +    C+  + TY  +I+G   +G++
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           +T  +L  R+  KG  P+ VT   +I   CK G +D A++LL +M+  +       +  +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855

Query: 546 LRGF 549
           + GF
Sbjct: 856 IEGF 859



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 251/533 (47%), Gaps = 57/533 (10%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           ++SFT  L    K   Y+   S+ + +   G  PD    + ++N LC       AF++  
Sbjct: 451 VSSFTRCLCSAGK---YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            + R     +  T+  +++  C  G I +A + F ++    C PNVVT+  LI+   + +
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM---------- 250
               A +LFE M++E    C P++VTY+++IDG CK G V+KA ++  +M          
Sbjct: 568 KVSYANELFETMLSEG---CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624

Query: 251 ------KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
                  D +  PNV+TY +L+ GFC     +EA+ L   M   G +P+ + ++A+I+  
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK GK+D+   +   M + G      TY+SL+D +  V R   A ++   M+   C  +V
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y  +I+  CK  K ++A  L + M  +  +P+V+TY  ++ G   +G +   L+L+++
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFV---------------------------------L 451
           M    V P+  T+   ID  CKNG +                                 +
Sbjct: 805 MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI 864

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ-HKGPIPDVV-TCST 509
           E++ +   I        +  Y  LI+ L K  RL+ A +L   +      + D   T ++
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           +I  LC   +++ A  L  +M  K  +P   +FC+L++G  +N+K S+ ++LL
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 158/582 (27%), Positives = 247/582 (42%), Gaps = 98/582 (16%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  +++  L+    K  + D+   + + ++   L  D F L      LCK+G    A  +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +    F P+TV +  LI+GLC      EA     ++   +C PNVVT++TL+ G C 
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG-CL 348

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +  L   K    M+   G  C P    +NS++   C  G    A +LL +M      P 
Sbjct: 349 NKKQLGRCKRVLNMMMMEG--CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPG 406

Query: 259 VITYNSL---ICG--------------------------------------FCCVDDWKE 277
            + YN L   ICG                                       C    +++
Sbjct: 407 YVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEK 466

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +  EM+  G  PD  T++ ++NY C   KM+    L E M + G+  D  TY  ++D
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC  G I +AR+ F  M   GC  +V +Y  LI+A  K +KV  A  L+  MLSE   P
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD----------------SFTFATYI 441
           +++TY+ L+ G  + G +  A ++ ++M  +  VPD                  T+   +
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT-------------- 487
           DG CK+  V EA ++  A+    CE     Y+ LI+GLCK+G+L                
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706

Query: 488 ---------------------ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
                                A K+  ++      P+VV  + MI  LCK G+ D+A  L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +  ME K C P+ VT+  ++ GF    K    + LL +M ++
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 218/474 (45%), Gaps = 32/474 (6%)

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           LN+L+   C+ G  S A   LGR+    F P+  T+N LI       R+  A+ + ++++
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
           +     +  T       LC+      AL L E     F     PD V Y  +I GLC+  
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENF----VPDTVFYTKLISGLCEAS 316

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC--LFIEMMDNGVQPDVVT 296
             ++A + L +M+  +  PNV+TY++L+CG  C++  +  +C  +   MM  G  P    
Sbjct: 317 LFEEAMDFLNRMRATSCLPNVVTYSTLLCG--CLNKKQLGRCKRVLNMMMMEGCYPSPKI 374

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL------VGRISRARE 350
           FN++++  C  G      +LL+ M++ G  P  V YN L+   C          +  A +
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
            +  M++ G   +  + +      C   K E A  + REM+ +   P   TY+ +L+ L 
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
               +  A  L ++M+   +V D +T+   +D  CK G + +A + F  +R   C   + 
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  LI+   K  ++  A +LF  +  +G +P++VT S +I   CK GQ++KA  +   M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614

Query: 531 EAKNCVP------------SE----VTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
                VP            SE    VT+  LL GF ++++  +   LL  M+ E
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 208/462 (45%), Gaps = 54/462 (11%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G I   +A  +F+ M ++  +P + ++T L+    K K+      LF+ + S G  P+
Sbjct: 530 KAGLI--EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRS----------------CFTPNTVTFNFLIN 159
           +   + LI+  CK G    A  +  R+  S                   PN VT+  L++
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-FGA 218
           G C   R+ EA +L   +++  C+PN + ++ LI+GLC+      A ++  EM    F A
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707

Query: 219 I-------------------------------CKPDVVTYNSIIDGLCKDGFVDKAKELL 247
                                           C P+VV Y  +IDGLCK G  D+A +L+
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M+++   PNV+TY ++I GF  +   +    L   M   GV P+ VT+  +I++ CK+
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D  + LLE M Q      T  Y  +++GF        +  L   +        +  Y
Sbjct: 828 GALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN--KEFIESLGLLDEIGQDDTAPFLSVY 885

Query: 368 NILINANCKDQKVEDAVCLYREM--LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            +LI+   K Q++E A+ L  E+   S  +     TYN+L+  L     +  A +L  +M
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 945

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
               V+P+  +F + I GL +N  + EA+ +   I +  C L
Sbjct: 946 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVCPL 987


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 253/544 (46%), Gaps = 60/544 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+ F + M      P + +++ LL      KQ      +   +   G +P   + N L
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC----------------AEGR 166
           ++  C  G  S A+ +L ++++    P  V +N LI  +C                A   
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438

Query: 167 IMEAARLFKKLNVFA-----CD--------------------PNVVTFNTLINGLCRTRN 201
           ++ A  +  K+NV +     C                     P+  T++ ++N LC    
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
             +A  LFEEM  + G +   DV TY  ++D  CK G +++A++   +M++    PNV+T
Sbjct: 499 MELAFLLFEEM--KRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y +LI  +        A  LF  M+  G  P++VT++A+I+ +CK G+++K  ++ E M 
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615

Query: 322 ----------------QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
                                P+ VTY +L+DGFC   R+  AR+L  +M  +GC  +  
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            Y+ LI+  CK  K+++A  +  EM       ++ TY++L+   F+V     A K++ KM
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
             N   P+   +   IDGLCK G   EA ++ Q +    C+  + TY  +I+G   +G++
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           +T  +L  R+  KG  P+ VT   +I   CK G +D A++LL +M+  +       +  +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855

Query: 546 LRGF 549
           + GF
Sbjct: 856 IEGF 859



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 251/533 (47%), Gaps = 57/533 (10%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           ++SFT  L    K   Y+   S+ + +   G  PD    + ++N LC       AF++  
Sbjct: 451 VSSFTRCLCSAGK---YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            + R     +  T+  +++  C  G I +A + F ++    C PNVVT+  LI+   + +
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM---------- 250
               A +LFE M++E    C P++VTY+++IDG CK G V+KA ++  +M          
Sbjct: 568 KVSYANELFETMLSEG---CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624

Query: 251 ------KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
                  D +  PNV+TY +L+ GFC     +EA+ L   M   G +P+ + ++A+I+  
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK GK+D+   +   M + G      TY+SL+D +  V R   A ++   M+   C  +V
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y  +I+  CK  K ++A  L + M  +  +P+V+TY  ++ G   +G +   L+L+++
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFV---------------------------------L 451
           M    V P+  T+   ID  CKNG +                                 +
Sbjct: 805 MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI 864

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ-HKGPIPDVV-TCST 509
           E++ +   I        +  Y  LI+ L K  RL+ A +L   +      + D   T ++
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           +I  LC   +++ A  L  +M  K  +P   +FC+L++G  +N+K S+ ++LL
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 158/582 (27%), Positives = 247/582 (42%), Gaps = 98/582 (16%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  +++  L+    K  + D+   + + ++   L  D F L      LCK+G    A  +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +    F P+TV +  LI+GLC      EA     ++   +C PNVVT++TL+ G C 
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG-CL 348

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +  L   K    M+   G  C P    +NS++   C  G    A +LL +M      P 
Sbjct: 349 NKKQLGRCKRVLNMMMMEG--CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPG 406

Query: 259 VITYNSL---ICG--------------------------------------FCCVDDWKE 277
            + YN L   ICG                                       C    +++
Sbjct: 407 YVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEK 466

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +  EM+  G  PD  T++ ++NY C   KM+    L E M + G+  D  TY  ++D
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC  G I +AR+ F  M   GC  +V +Y  LI+A  K +KV  A  L+  MLSE   P
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD----------------SFTFATYI 441
           +++TY+ L+ G  + G +  A ++ ++M  +  VPD                  T+   +
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT-------------- 487
           DG CK+  V EA ++  A+    CE     Y+ LI+GLCK+G+L                
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706

Query: 488 ---------------------ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
                                A K+  ++      P+VV  + MI  LCK G+ D+A  L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +  ME K C P+ VT+  ++ GF    K    + LL +M ++
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 218/474 (45%), Gaps = 32/474 (6%)

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           LN+L+   C+ G  S A   LGR+    F P+  T+N LI       R+  A+ + ++++
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
           +     +  T       LC+      AL L E     F     PD V Y  +I GLC+  
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENF----VPDTVFYTKLISGLCEAS 316

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI--EMMDNGVQPDVVT 296
             ++A + L +M+  +  PNV+TY++L+CG  C++  +  +C  +   MM  G  P    
Sbjct: 317 LFEEAMDFLNRMRATSCLPNVVTYSTLLCG--CLNKKQLGRCKRVLNMMMMEGCYPSPKI 374

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL------VGRISRARE 350
           FN++++  C  G      +LL+ M++ G  P  V YN L+   C          +  A +
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
            +  M++ G   +  + +      C   K E A  + REM+ +   P   TY+ +L+ L 
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
               +  A  L ++M+   +V D +T+   +D  CK G + +A + F  +R   C   + 
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  LI+   K  ++  A +LF  +  +G +P++VT S +I   CK GQ++KA  +   M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614

Query: 531 EAKNCVP------------SE----VTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
                VP            SE    VT+  LL GF ++++  +   LL  M+ E
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 208/461 (45%), Gaps = 54/461 (11%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G I   +A  +F+ M ++  +P + ++T L+    K K+      LF+ + S G  P+
Sbjct: 530 KAGLI--EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRS----------------CFTPNTVTFNFLIN 159
           +   + LI+  CK G    A  +  R+  S                   PN VT+  L++
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-FGA 218
           G C   R+ EA +L   +++  C+PN + ++ LI+GLC+      A ++  EM    F A
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707

Query: 219 I-------------------------------CKPDVVTYNSIIDGLCKDGFVDKAKELL 247
                                           C P+VV Y  +IDGLCK G  D+A +L+
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M+++   PNV+TY ++I GF  +   +    L   M   GV P+ VT+  +I++ CK+
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D  + LLE M Q      T  Y  +++GF        +  L   +        +  Y
Sbjct: 828 GALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN--KEFIESLGLLDEIGQDDTAPFLSVY 885

Query: 368 NILINANCKDQKVEDAVCLYREM--LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            +LI+   K Q++E A+ L  E+   S  +     TYN+L+  L     +  A +L  +M
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 945

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
               V+P+  +F + I GL +N  + EA+ +   I + + +
Sbjct: 946 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 238/480 (49%), Gaps = 6/480 (1%)

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           +S F+ + S+G+ PD+   N ++  L           V   +L+    P+ VT+N L++ 
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 161 LCAEGRIMEAARLFKKLNV--FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA 218
              EGR  + A L K++      C PN VT+N +I GL R  +   A +L E M      
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-- 271

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
             K    TYN +I GL   G V K  +L L+M++  I P V+TYN++I G       + A
Sbjct: 272 --KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAA 329

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           +  F EM   G+ PDV+T+N+++N  CK G + +   L   + + G+ P  +TYN  +DG
Sbjct: 330 QVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDG 389

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           +C +G +  AR L   M  +GC  +V +Y IL+  +     +  A   + EMLS+ ++P 
Sbjct: 390 YCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPD 449

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              YNT +     +G++  AL+L + + L  +  D+ T+   I GLCK G + +A ++  
Sbjct: 450 CFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQM 509

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
            + +   +    TY CLI+  C+ G L+ A K+F+ +   G +P  VT + +IH  C+ G
Sbjct: 510 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRG 569

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +  A      M  +   P+E+T+  L+    +  +        H+M    LV +  + +
Sbjct: 570 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYT 629



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 143/481 (29%), Positives = 241/481 (50%), Gaps = 8/481 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS--NGLFPDLFVLNLLINCLCKM 129
           M+++   P + ++  LL    K  + D V  L K + +  +G  P+    N++I  L + 
Sbjct: 195 MLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRK 254

Query: 130 G-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
           G +   A +V G  +R     ++ T+N LI GL A G + +   L  ++      P VVT
Sbjct: 255 GDLEEAAELVEG--MRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVT 312

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +N +I+GL ++     A   F EM    G +  PDV+TYNS+++G CK G + +A  L  
Sbjct: 313 YNAMIHGLLQSGLVEAAQVKFAEM-RAMGLL--PDVITYNSLLNGYCKAGNLKEALLLFG 369

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            ++   + P V+TYN  I G+C + D +EA+ L  EM + G  P+V T+  ++  +    
Sbjct: 370 DLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVC 429

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            +       + M+ +G+ PD   YN+ +    ++G I+RA EL   ++ +G   D  +YN
Sbjct: 430 SLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYN 489

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           ILI+  CK   ++DA  L  +M+S  ++P  ITY  L+    + G L +A K+ + M  +
Sbjct: 490 ILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 549

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            ++P + TF   I   C+ G +  A   F+ +     E    TYN LI+ LC+MGR + A
Sbjct: 550 GLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLA 609

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
              FH +  +G + +  T + +I   CK G  + A     +M      P  +T   L++G
Sbjct: 610 SHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKG 669

Query: 549 F 549
           F
Sbjct: 670 F 670



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 3/232 (1%)

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M S G   DV   N ++ A     + +D   ++ EML   I PS++TYNTLL    +
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 412 VGNLGDALKLIDKMQL--NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            G       L+ +M+   +  +P+  T+   I GL + G + EA ++ + +R  K     
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF 276

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TYN LI GL   G +K    L   ++++G +P VVT + MIH L + G ++ A     +
Sbjct: 277 -TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 335

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           M A   +P  +T+ +LL G+ +     + ++L   +    L  + L+ + ++
Sbjct: 336 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRI 387



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 60/132 (45%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F+ MI     P   +FT+++    +     +    F+++   G+ P+    N+LI
Sbjct: 538 EARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLI 597

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC+MG T  A      +L      N  T+  LI+G C  G   +A R + +++     
Sbjct: 598 HALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIH 657

Query: 184 PNVVTFNTLING 195
           P+ +T   L+ G
Sbjct: 658 PDYLTHKALVKG 669


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 236/449 (52%), Gaps = 9/449 (2%)

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
           +S+ L  DL VL L         + S    +L         P+  + N L++ L A  R+
Sbjct: 110 SSSPLIADLLVLAL---ASASQPLASYEAFLLAGDAHPRHRPSAFSVNRLLSALVAAERV 166

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
             A R FK        P++ TFN +I+GLC+T     A  + ++ +  +G    P VVTY
Sbjct: 167 DLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKD-IRAWG--LAPSVVTY 223

Query: 228 NSIIDGLCKDGFVDK---AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           N+IIDG CK G   +      LL +M +  I+PN +T+N L+ G+C   +   A  +F E
Sbjct: 224 NTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEE 283

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M   G+   VVT++A++   C +GK+++  +L++ M   G+ P+  T NS+++GFC  G 
Sbjct: 284 MKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGM 343

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           ++ A     SM  K  + +V +Y IL++   +  K++DA+ +   M  + +RP+   YN 
Sbjct: 344 MTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNC 403

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L++G  + G+      L+D+M++  V  D  T+   I  LC  G V +AV++   +    
Sbjct: 404 LIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVG 463

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
            E    TYN +ING C+ G +K+A ++  R++      +VVT +  I  LC+ G+M++ N
Sbjct: 464 LEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETN 523

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           +LL +M  K  VP+ VT+ T+  G ++  
Sbjct: 524 ELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 215/448 (47%), Gaps = 46/448 (10%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   S   LL+ L   ++ D     FK      + PDLF  N++I+ LCK G    A  V
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAE---GRIMEAARLFKKLNVFACDPNVVTFNTLING 195
              I      P+ VT+N +I+G C     GR+     L K++      PN VTFN L+NG
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
            C+  NT  A+++FEEM  +  A     VVTY++++ GLC +G V++  +L+ +MKD  +
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAA---SVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGL 324

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PN+ T NS++ GFC      +A+     M    V+P+VVT+  +++   +  KM     
Sbjct: 325 VPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALA 384

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           + E M  +GV P+   YN L+ GF   G       L   M  KG R D+ +YN+LI A C
Sbjct: 385 VKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALC 444

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
              +V  AV L  EML   + P  +TYNT+++G  + GN+  A ++  +M+         
Sbjct: 445 VKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRME--------- 495

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
                                       K    + TYN  I  LC+MG+++   +L + +
Sbjct: 496 --------------------------KGKKRANVVTYNVFIKCLCRMGKMEETNELLNEM 529

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
             KG +P+ VT  T+     KEG M+K 
Sbjct: 530 LEKGLVPNGVTYDTI-----KEGMMEKG 552



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 202/384 (52%), Gaps = 6/384 (1%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F   ++ + SP + +F I+++ L K  Q      + K + + GL P +   N +I+  CK
Sbjct: 173 FKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCK 232

Query: 129 MGITSGAFVV---LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
            G     + V   L  ++ +  +PN VTFN L+NG C +     A R+F+++       +
Sbjct: 233 RGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAAS 292

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           VVT++ L+ GLC        +KL +EM  + G +  P++ T NS+++G CK G +  A+ 
Sbjct: 293 VVTYSALVWGLCSEGKVEEGVKLVDEM-KDLGLV--PNLATLNSVLNGFCKKGMMTDAEG 349

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
            +  M+ +N+ PNV+TY  L+ G+  +D  K+A  +   M   GV+P+   +N +I    
Sbjct: 350 WIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFT 409

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           ++G    V+ LL+ M  +GV  D VTYN L+   C+ G + +A +L   M+  G      
Sbjct: 410 RNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHL 469

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +YN +IN  C+   ++ A  +   M   + R +V+TYN  +  L ++G + +  +L+++M
Sbjct: 470 TYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEM 529

Query: 426 QLNDVVPDSFTFATYIDGLCKNGF 449
               +VP+  T+ T  +G+ + G+
Sbjct: 530 LEKGLVPNGVTYDTIKEGMMEKGY 553



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 196/395 (49%), Gaps = 7/395 (1%)

Query: 161 LCAEGRIMEAARLFKKLNVFACDP---NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           L +E   + AARL    ++    P   + +  + L+  L      L + + F  +  +  
Sbjct: 85  LRSELHALAAARLHSPASIVRALPASSSPLIADLLVLALASASQPLASYEAFL-LAGDAH 143

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
              +P   + N ++  L     VD A+        R ++P++ T+N +I G C     ++
Sbjct: 144 PRHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRK 203

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCK---DGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           A  +  ++   G+ P VVT+N +I+  CK    G+M  V+ LL+ M++ G++P+ VT+N 
Sbjct: 204 AGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNV 263

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L++G+C     + A  +F  M  +G    V +Y+ L+   C + KVE+ V L  EM    
Sbjct: 264 LVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLG 323

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           + P++ T N++L+G  + G + DA   ID M+  +V P+  T+   +DG  +   + +A+
Sbjct: 324 LVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDAL 383

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            V +A+           YNCLI G  + G  ++   L   ++ KG   D+VT + +I  L
Sbjct: 384 AVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGAL 443

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           C +G++ KA  LL +M      P  +T+ T++ G+
Sbjct: 444 CVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGY 478



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 140/275 (50%), Gaps = 3/275 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  F+ M +   +  + +++ L+  L    + +  V L   +   GL P+L  LN ++N
Sbjct: 277 AVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLN 336

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G+ + A   +  + +    PN VT+  L++G     ++ +A  + + ++     P
Sbjct: 337 GFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRP 396

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N   +N LI G  R  +      L +EM  +     + D+VTYN +I  LC  G V KA 
Sbjct: 397 NARIYNCLIAGFTRNGDWRSVSGLLDEMRMKG---VRADIVTYNVLIGALCVKGEVRKAV 453

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +LL +M    + P  +TYN++I G+C   + K A  +   M     + +VVT+N  I   
Sbjct: 454 KLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCL 513

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
           C+ GKM++ N LL  M+++G+ P+ VTY+++ +G 
Sbjct: 514 CRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGM 548


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 249/490 (50%), Gaps = 5/490 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  M      P + ++++L+    K +  +TVV L + +  +G+ P+++   + I
Sbjct: 200 EAMEVYKVMATDGIVPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSYTICI 258

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             L + G    A+ +L ++      P+ VT   LI  LC  GR+ +A  +F K+      
Sbjct: 259 RVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQK 318

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TL++      ++   ++++  M  +       +VV Y +++D LC+ G VD+A
Sbjct: 319 PDRVTYITLLDKCGDNGDSRSVIEIWNAMKADG---YNDNVVAYTAVVDALCQVGRVDEA 375

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ++  QMK + I P   +YNSLI GF   D    A  LF  M  +G  P+  T+   INY
Sbjct: 376 SDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINY 435

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G+  K  +  ELM  +G+ PD V  N+++      GR+  A+ +F  + S G   D
Sbjct: 436 YGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPD 495

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y ++I    K    ++A+ ++ EM+  R  P V+  N+L+  L++ G   +A K+  
Sbjct: 496 NITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFH 555

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +++  ++ P   T+ T + GL + G V E + + + + +      + TYN +++ LCK G
Sbjct: 556 ELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNG 615

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A  + + +  KG +PD+ + +T +H L KE ++ +A  +   M+ K   P   T C
Sbjct: 616 EVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTTLC 674

Query: 544 TLLRGFVQNN 553
           T+L  FV+N 
Sbjct: 675 TILPSFVKNG 684



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 256/543 (47%), Gaps = 42/543 (7%)

Query: 43   DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
            D  ++   ++  +K+G    NEA   F  + +M   P   ++  LL  L +  +   V+ 
Sbjct: 530  DVLAVNSLIDTLYKAGR--GNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMH 587

Query: 103  LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
            L + +NSN   P+L   N +++CLCK G  + A  +L  +      P+  ++N  ++GL 
Sbjct: 588  LLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLV 647

Query: 163  AEGRIMEAARLFKKLN-VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
             E R+ EA R+F ++  V A  P+  T  T++    +      AL   +E + + G+  K
Sbjct: 648  KEDRLTEAFRIFCQMKKVLA--PDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGS--K 703

Query: 222  PDVVTYNSIIDG-----------------------------------LCKDGFVDKAKEL 246
             D  +++S+++G                                   LCK     +A EL
Sbjct: 704  ADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHEL 763

Query: 247  LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
            + + +   ++    +YN+LICG    +    A+ LF EM   G  PD  T+N +++   K
Sbjct: 764  VKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGK 823

Query: 307  DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
              +++ + ++ + M  +G     VTYN+++ G      +  A +L+  ++S+G      +
Sbjct: 824  SMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCT 883

Query: 367  YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
            Y  L++   KD K+EDA  L+ EML    +P+   YN LL+G    GN     +L   M 
Sbjct: 884  YGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMV 943

Query: 427  LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
               + PD  ++   I  LC  G + +++  F+ +     E  + TYN LI+GL + GRL+
Sbjct: 944  DQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLE 1003

Query: 487  TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
             A  LF+ ++  G  P++ T +++I +L KEG+  +A  +  ++      P+  T+  L+
Sbjct: 1004 EAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALI 1063

Query: 547  RGF 549
             G+
Sbjct: 1064 GGY 1066



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/560 (24%), Positives = 256/560 (45%), Gaps = 41/560 (7%)

Query: 79   PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
            P   ++T+++   +K    D  + +F  +      PD+  +N LI+ L K G  + A+ +
Sbjct: 494  PDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKI 553

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
               +      P   T+N L+ GL  EG++ E   L +++N  +  PN++T+NT+++ LC+
Sbjct: 554  FHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCK 613

Query: 199  TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                  AL +   M  +    C PD+ +YN+ + GL K+  + +A  +  QMK + + P+
Sbjct: 614  NGEVNYALGMLYNMTMKG---CMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPD 669

Query: 259  VITYNSLICGFCCVDDWKEAKCLFIE-MMDNGVQPDVVTFNAM----------------- 300
              T  +++  F       EA     E ++  G + D  +F+++                 
Sbjct: 670  YTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFA 729

Query: 301  ------------------INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
                              I + CK  K  + + L++     GV+  T +YN+L+ G    
Sbjct: 730  ENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDE 789

Query: 343  GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
              I  A  LF  M   GC  D ++YN++++A  K  ++ED + + +EM  +    + +TY
Sbjct: 790  NLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTY 849

Query: 403  NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            NT++SGL +   L +A+ L  K+      P   T+   +DGL K+G + +A  +F  + +
Sbjct: 850  NTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLD 909

Query: 463  CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              C+     YN L+NG    G  +  C+LF  +  +G  PD+ + + +I  LC  G+++ 
Sbjct: 910  YGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLND 969

Query: 523  ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
            +      +      P  +T+  L+ G  ++ +  + V L + M     +  +L   + ++
Sbjct: 970  SLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSG-IAPNLYTYNSLI 1028

Query: 583  DLLSKDKKYRECLNQFRHLL 602
              L K+ K  E    +  LL
Sbjct: 1029 LYLGKEGKAAEAGKMYEELL 1048



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 262/561 (46%), Gaps = 10/561 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           +G +   F+N   KSG   S +A+  ++ M      P + +   +L  LAK+ +      
Sbjct: 425 NGYTYVLFINYYGKSGE--SLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKR 482

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +F  L S G+ PD     ++I C  K      A  V   ++ +   P+ +  N LI+ L 
Sbjct: 483 VFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLY 542

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICK 221
             GR  EA ++F +L     DP   T+NTL+ GL R       + L EEM  N +     
Sbjct: 543 KAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSY----P 598

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+++TYN+++D LCK+G V+ A  +L  M  +   P++ +YN+ + G    D   EA  +
Sbjct: 599 PNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRI 658

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDK-VNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           F + M   + PD  T   ++    K+G M++ ++ L E ++Q G   D  +++SLM+G  
Sbjct: 659 FCQ-MKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGIL 717

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
               + ++ E   ++       D +  + LI   CK +K  +A  L ++  S  +     
Sbjct: 718 KRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTG 777

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YN L+ GL     +  A  L  +M+     PD FT+   +D + K+  + + ++V + +
Sbjct: 778 SYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEM 837

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                E    TYN +I+GL K   L  A  L+++L  +G  P   T   ++  L K+G++
Sbjct: 838 HCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKI 897

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           + A DL  +M    C P+   +  LL G+       KV  L   M  ++ +  D+   + 
Sbjct: 898 EDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNM-VDQGINPDIKSYTV 956

Query: 581 VVDLLSKDKKYRECLNQFRHL 601
           ++  L    +  + L+ FR L
Sbjct: 957 LIGALCTAGRLNDSLSYFRQL 977



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 233/507 (45%), Gaps = 41/507 (8%)

Query: 129 MGITSG---AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK---------- 175
           +G+  G   A V L  +  +    N+ T+N LI  L   G   EA  ++K          
Sbjct: 157 LGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPS 216

Query: 176 ------------------------KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
                                   ++      PNV ++   I  L +      A K+ ++
Sbjct: 217 VRTYSVLMLAFGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQK 276

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           M +E    CKPDVVT   +I  LC  G V  AK++  +MK  +  P+ +TY +L+     
Sbjct: 277 MEDEG---CKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGD 333

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
             D +    ++  M  +G   +VV + A+++  C+ G++D+ + + + M Q+G+ P   +
Sbjct: 334 NGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYS 393

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YNSL+ GF    R++ A ELF  M   G   + Y+Y + IN   K  +   A+  Y  M 
Sbjct: 394 YNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMK 453

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
           S+ I P V+  N +L  L + G LG A ++  +++   V PD+ T+   I    K     
Sbjct: 454 SKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNAD 513

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           EA++VF  +   +C   +   N LI+ L K GR   A K+FH L+     P   T +T++
Sbjct: 514 EAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLL 573

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             L +EG++ +   LL +M + +  P+ +T+ T+L    +N + +  + +L+ M   K  
Sbjct: 574 AGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTM-KGC 632

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQF 598
           + DLS  +  +  L K+ +  E    F
Sbjct: 633 MPDLSSYNTALHGLVKEDRLTEAFRIF 659



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 204/449 (45%), Gaps = 15/449 (3%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR-LNSNGLFPDLFVLNLL 122
            EA   F C +K   +P  T+   +L    KN   +  +   K  +   G   D    + L
Sbjct: 654  EAFRIF-CQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSL 712

Query: 123  INCLCKMG-----ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
            +  + K       I     + L RIL   F       + LI  LC   + +EA  L KK 
Sbjct: 713  MEGILKRAGMEKSIEFAENIALSRILLDDFF-----LSPLIRHLCKSKKALEAHELVKKF 767

Query: 178  NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                      ++N LI GL       VA  LF EM    G  C PD  TYN I+D + K 
Sbjct: 768  ESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEM-KRLG--CDPDEFTYNLILDAMGKS 824

Query: 238  GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
              ++   ++  +M  +      +TYN++I G        EA  L+ ++M  G  P   T+
Sbjct: 825  MRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTY 884

Query: 298  NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
              +++   KDGK++    L + M+  G  P+   YN L++G+ L G   +  ELF +MV 
Sbjct: 885  GPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVD 944

Query: 358  KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            +G   D+ SY +LI A C   ++ D++  +R++    + P +ITYN L+ GL + G L +
Sbjct: 945  QGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEE 1004

Query: 418  ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
            A+ L + M+ + + P+ +T+ + I  L K G   EA ++++ +     +  + TYN LI 
Sbjct: 1005 AVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIG 1064

Query: 478  GLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G    G    A   + ++   G  P+  T
Sbjct: 1065 GYSVSGSTDNAFASYGQMIVGGCPPNSST 1093



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 229/489 (46%), Gaps = 46/489 (9%)

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT---RNTLVALK 207
           T + N+++  + A GR+ + A++F  +       NV TF T+   L      R+  VAL 
Sbjct: 112 TESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALP 171

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
               M+ E G +   +  TYN +I  L K G+  +A E+   M    I P+V TY+ L+ 
Sbjct: 172 ----MMKEAGIVL--NSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLML 225

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            F    D +    L  EM D+GV+P+V ++   I    + G+ ++  ++L+ M   G  P
Sbjct: 226 AF-GKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKP 284

Query: 328 DTVTYNSLMDGFCLVGRISRARELFV---------------------------------- 353
           D VT   L+   C  GR+S A+++F                                   
Sbjct: 285 DVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIW 344

Query: 354 -SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
            +M + G   +V +Y  +++A C+  +V++A  ++ +M  + I P   +YN+L+SG  + 
Sbjct: 345 NAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKA 404

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
             L  AL+L + M ++   P+ +T+  +I+   K+G  L+A++ ++ +++      +   
Sbjct: 405 DRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAG 464

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N ++  L K GRL  A ++FH L+  G  PD +T + MI    K    D+A  +  +M  
Sbjct: 465 NAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIE 524

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
             CVP  +   +L+    +  + ++   + H++    L  +D + ++ +   L ++ K +
Sbjct: 525 TRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAG-LGREGKVK 583

Query: 593 ECLNQFRHL 601
           E ++    +
Sbjct: 584 EVMHLLEEM 592



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 175/354 (49%), Gaps = 3/354 (0%)

Query: 84   FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
             + L+  L K+K+      L K+  S G+       N LI  L    +   A  +   + 
Sbjct: 744  LSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMK 803

Query: 144  RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
            R    P+  T+N +++ +    RI +  ++ K+++    +   VT+NT+I+GL +++   
Sbjct: 804  RLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLY 863

Query: 204  VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
             A+ L+ ++++E      P   TY  ++DGL KDG ++ A++L  +M D    PN   YN
Sbjct: 864  EAMDLYYKLMSEG---FSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYN 920

Query: 264  SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
             L+ G+    + ++   LF  M+D G+ PD+ ++  +I   C  G+++        + + 
Sbjct: 921  ILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTEL 980

Query: 324  GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            G+ PD +TYN L+ G    GR+  A  LF  M   G   ++Y+YN LI    K+ K  +A
Sbjct: 981  GLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEA 1040

Query: 384  VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
              +Y E+L    +P+V TYN L+ G    G+  +A     +M +    P+S T+
Sbjct: 1041 GKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 156/305 (51%), Gaps = 3/305 (0%)

Query: 68   FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
             F  M ++   P   ++ ++L  + K+ + + ++ + K ++  G        N +I+ L 
Sbjct: 798  LFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLV 857

Query: 128  KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
            K  +   A  +  +++   F+P   T+  L++GL  +G+I +A  LF ++  + C PN  
Sbjct: 858  KSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRA 917

Query: 188  TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
             +N L+NG     NT    +LF+ MV++      PD+ +Y  +I  LC  G ++ +    
Sbjct: 918  IYNILLNGYRLAGNTEKVCELFQNMVDQG---INPDIKSYTVLIGALCTAGRLNDSLSYF 974

Query: 248  LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             Q+ +  + P++ITYN LI G       +EA  LF +M  +G+ P++ T+N++I Y  K+
Sbjct: 975  RQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKE 1034

Query: 308  GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
            GK  +  ++ E +++ G  P+  TYN+L+ G+ + G    A   +  M+  GC  +  +Y
Sbjct: 1035 GKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094

Query: 368  NILIN 372
              L N
Sbjct: 1095 MQLPN 1099



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 147/331 (44%), Gaps = 43/331 (12%)

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK----DGKMDKVNRLLELMIQRGVNPDT 329
           D  EA  LF  +     QP +V      NY  +     G++  + ++ +LM ++ V  + 
Sbjct: 91  DPAEALQLFKSVAQ---QPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANV 147

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
            T+ ++     + G +  A      M   G   + Y+YN LI    K     +A+ +Y+ 
Sbjct: 148 GTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKV 207

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M ++ I PSV TY+ L+   F   ++   + L+ +M+ + V P+ +++   I  L + G 
Sbjct: 208 MATDGIVPSVRTYSVLMLA-FGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGR 266

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
             EA ++ Q + +  C+  + T   LI  LC  GR+  A  +F +++     PD VT  T
Sbjct: 267 FEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYIT 326

Query: 510 MIH--------------W---------------------LCKEGQMDKANDLLLDMEAKN 534
           ++               W                     LC+ G++D+A+D+   M+ K 
Sbjct: 327 LLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKG 386

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             P + ++ +L+ GF++ ++ +  + L + M
Sbjct: 387 IEPQQYSYNSLISGFLKADRLNHALELFNHM 417



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 35/258 (13%)

Query: 346 SRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           + A +LF S+  +    H   S N ++       +V D   ++  M  + ++ +V T+ T
Sbjct: 93  AEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLT 152

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           +   L   G L  A   +  M+   +V +S+T+   I  L K+G+  EA++V++ +    
Sbjct: 153 IFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDG 212

Query: 465 CELRIETYNCL----------------------------------INGLCKMGRLKTACK 490
               + TY+ L                                  I  L + GR + A K
Sbjct: 213 IVPSVRTYSVLMLAFGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYK 272

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           +  +++ +G  PDVVT + +I  LC  G++  A D+   M+A +  P  VT+ TLL    
Sbjct: 273 ILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCG 332

Query: 551 QNNKKSKVVVLLHKMAAE 568
            N     V+ + + M A+
Sbjct: 333 DNGDSRSVIEIWNAMKAD 350



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 69/134 (51%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            N+++ +F  + ++   P + ++ +L+  L ++ + +  VSLF  +  +G+ P+L+  N L
Sbjct: 968  NDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSL 1027

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I  L K G  + A  +   +L++ + PN  T+N LI G    G    A   + ++ V  C
Sbjct: 1028 ILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGC 1087

Query: 183  DPNVVTFNTLINGL 196
             PN  T+  L N L
Sbjct: 1088 PPNSSTYMQLPNQL 1101


>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Brachypodium distachyon]
          Length = 821

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 244/519 (47%), Gaps = 40/519 (7%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + +++ + A++ Q D    LF  +      PD  + N LI+   + G    A  ++  +L
Sbjct: 158 YGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDML 217

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R+   P+  T+N +IN   A G   +A  L KK+      P++VT N +++         
Sbjct: 218 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYS 277

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN--PNVIT 261
            A+  FE M    GA   PD  T N +I  L KDG   +A ELL  M+++     P+V+T
Sbjct: 278 KAIAYFEMMK---GANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVT 334

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y S++  +      ++ K +F  M+  GV+P++V++NA++      G       + +L+ 
Sbjct: 335 YTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLK 394

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           Q G+ PD V+Y +L++ +   G+  +ARE F  M    CR ++ SYN LI+A       +
Sbjct: 395 QNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFK 454

Query: 382 DAVCLYREMLSERIRPSVITYNTLL--------------------------------SGL 409
           +A+ L  EM  + I P V++ +TLL                                SG+
Sbjct: 455 EAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGI 514

Query: 410 ---FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
                 G+ G AL+L   M  ++V PD+ T+   I GLCK G   E+++ F+ + + +  
Sbjct: 515 GSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIP 574

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           L  E Y+ LI    K G+L  A   F  ++  G +PDV+T + MI     +G    A DL
Sbjct: 575 LTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDL 634

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             +ME     P  +   +L+    + ++  +V+ L+  M
Sbjct: 635 FKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELM 673



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/531 (23%), Positives = 238/531 (44%), Gaps = 40/531 (7%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M +    P + +  I+L+      QY   ++ F+ +    + PD F LN++I+CL K G 
Sbjct: 251 MTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQ 310

Query: 132 TSGAFVVLG--RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
              A  +L   R  R+   P+ VT+  +++     G++ +   +F  +      PN+V++
Sbjct: 311 YGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSY 370

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
           N L+           AL +F+ ++ + G   +PDVV+Y ++++   + G  +KA+E   +
Sbjct: 371 NALLGAYASRGMHADALGIFK-LLKQNG--LRPDVVSYTTLLNAYGRSGQPEKAREAFKE 427

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M+  +  PN+++YN+LI  +     +KEA  L  EM  +G+ PDVV+ + ++    +  +
Sbjct: 428 MRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQ 487

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + K++ +LE    RG+  + V YNS +  +   G   +A EL+  M++     D  +YNI
Sbjct: 488 ITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNI 547

Query: 370 LINANCKDQKVEDAVCLYREMLSERIR--------------------------------- 396
           LI+  CK  K  +++  + +M+  RI                                  
Sbjct: 548 LISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESG 607

Query: 397 --PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
             P V+TY  ++      G+  +A  L  +M+ N V PD+   ++ ++ L +       +
Sbjct: 608 CLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVL 667

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           Q+ + ++     L  + Y  +I     +   KTA ++   L        V T + ++ +L
Sbjct: 668 QLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFL 727

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            K G+ +    L   M +        T+  LLR  +   K  K + +L  M
Sbjct: 728 GKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWM 778



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/565 (23%), Positives = 243/565 (43%), Gaps = 97/565 (17%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL-------- 116
           A+   D M++    P  T++  ++        +   + L K++  NG+ PDL        
Sbjct: 209 AINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLS 268

Query: 117 ---------------------------FVLNLLINCLCKMGITSGAFVVLG--RILRSCF 147
                                      F LN++I+CL K G    A  +L   R  R+  
Sbjct: 269 AFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQC 328

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+ VT+  +++     G++ +   +F  +      PN+V++N L+           AL 
Sbjct: 329 PPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALG 388

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +F +++ + G   +PDVV+Y ++++   + G  +KA+E   +M+  +  PN+++YN+LI 
Sbjct: 389 IF-KLLKQNG--LRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALID 445

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            +     +KEA  L  EM  +G+ PDVV+ + ++    +  ++ K++ +LE    RG+  
Sbjct: 446 AYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKL 505

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + V YNS +  +   G   +A EL+  M++     D  +YNILI+  CK  K  +++  +
Sbjct: 506 NIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFF 565

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            +M+  RI  +   Y++L+    + G L +A      M+ +  +PD  T+          
Sbjct: 566 EDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAM------- 618

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
                                IE YN         G  + A  LF  ++     PD + C
Sbjct: 619 ---------------------IEAYN-------DDGSWRNAWDLFKEMEGNTVQPDAIIC 650

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVP-------SEVTFCTLLRGFVQNNKKSKVVV 560
           S+++  L +  Q ++   L+  M+ K C+P         +  C++LR +           
Sbjct: 651 SSLMEALNRGSQHERVLQLMELMKEK-CIPLNQKAYFEIIASCSMLRDW----------- 698

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLL 585
              K A+E +   D SLSS  V  L
Sbjct: 699 ---KTASEIIEHLDSSLSSISVGTL 720



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 203/471 (43%), Gaps = 40/471 (8%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           EA  +   LN +A       F  LI  +    +   A+ +F  M N+     + D+  Y 
Sbjct: 102 EAHAVDAVLNCWAGRFARRNFPLLIREITFAGSLQHAVHVFRWMKNQENYCARNDI--YG 159

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +I    +   +D+A+ L  +M++    P+   YNSLI        W+ A  +  +M+  
Sbjct: 160 MMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRA 219

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF--------- 339
            + P   T+N +IN     G   K   L + M + GV PD VT+N ++  F         
Sbjct: 220 AIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKA 279

Query: 340 ------------------------CLV--GRISRARELFVSMVSK--GCRHDVYSYNILI 371
                                   CLV  G+   A EL  SM  K   C  DV +Y  ++
Sbjct: 280 IAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIM 339

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           ++     KVED   ++  M++E ++P++++YN LL      G   DAL +   ++ N + 
Sbjct: 340 HSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLR 399

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD  ++ T ++   ++G   +A + F+ +R   C   I +YN LI+     G  K A  L
Sbjct: 400 PDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISL 459

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
            H ++  G  PDVV+ ST++    +  Q+ K + +L   +++    + V + + +  ++ 
Sbjct: 460 LHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLN 519

Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
                K + L   M A   V  D    + ++  L K  KY E L  F  ++
Sbjct: 520 FGDYGKALELYAVMMASN-VNPDAVTYNILISGLCKVGKYAESLKFFEDMV 569



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 174/394 (44%), Gaps = 38/394 (9%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S+T LL    ++ Q +     FK +  N   P++   N LI+     G+   A  +
Sbjct: 400 PDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISL 459

Query: 139 LGRILRSCFTPNTVTFNFLIN--GLCAE----GRIMEAAR-------------------- 172
           L  + +    P+ V+ + L+   G C +      I+EAA+                    
Sbjct: 460 LHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLN 519

Query: 173 ---LFKKLNVFAC------DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
                K L ++A       +P+ VT+N LI+GLC+      +LK FE+MV+    + K  
Sbjct: 520 FGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKE- 578

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
              Y+S+I    K G + +A+     MK+    P+V+TY ++I  +     W+ A  LF 
Sbjct: 579 --VYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFK 636

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           EM  N VQPD +  ++++    +  + ++V +L+ELM ++ +  +   Y  ++    ++ 
Sbjct: 637 EMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLR 696

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
               A E+   + S      V + N L+    K  K E  + L+ +M+S      V TY 
Sbjct: 697 DWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYT 756

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            LL  L  VG     ++++  M+   V P  + +
Sbjct: 757 VLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLYMY 790



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 147/364 (40%), Gaps = 41/364 (11%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+     M K    P + S + LLT   + +Q   + ++ +   S G+  ++   N  I
Sbjct: 455 EAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGI 514

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA-------------------- 163
                 G    A  +   ++ S   P+ VT+N LI+GLC                     
Sbjct: 515 GSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIP 574

Query: 164 ---------------EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
                          +G++ EA   F  +    C P+V+T+  +I       +   A  L
Sbjct: 575 LTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDL 634

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F+EM    G   +PD +  +S+++ L +    ++  +L+  MK++ I  N   Y  +I  
Sbjct: 635 FKEME---GNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIAS 691

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQP-DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
              + DWK A  + IE +D+ +    V T N ++ +  K GK + + +L   M+      
Sbjct: 692 CSMLRDWKTASEI-IEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTV 750

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
              TY  L+     VG+  +  E+   M   G    +Y Y  ++    +D  + D V L 
Sbjct: 751 GVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLYMYQNVLPYIWRDNSM-DYVTLM 809

Query: 388 REML 391
           +E +
Sbjct: 810 QEKI 813


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 239/497 (48%), Gaps = 33/497 (6%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           T+  IL + L K +Q+     LF ++  +G+  D +V    I   C+     GA  ++ R
Sbjct: 165 TASQILFS-LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVR 223

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +       + V +N L+ GLC   R+ EA  +   +       + VT+ TL+ G CR   
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 202 TLVALKLFEEMV-------------------------NEFGAICK-------PDVVTYNS 229
             +AL++  +M+                           F   CK       P+V  YN+
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +ID LCK+   D A  L  +M  R + PN +TY  LI   C     ++A CLF +M D G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++  V  +N++IN  CK G +D+   LL  M++ G+ P   +Y+ L+ G C  G +S A 
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAM 463

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           EL   M  +G   + Y++  LIN  CKD+K+++A  L+ +M+   + P+ +T+N ++ G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
             VGN+  A +L D+M    + PD++T+ + I GLC    V +A +    + N    L  
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            +   L+ GL + GR      L+  +  +G   D+V+ + +++   K+   +K+  L  +
Sbjct: 584 FSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 530 MEAKNCVPSEVTFCTLL 546
           M+ +   P ++ +  ++
Sbjct: 644 MKEQGVKPDDIFYTCMI 660



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 240/503 (47%), Gaps = 37/503 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L+  L KN+++D    LFK +   GL P+     +LI+ LCK G+   A  +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++           +N LING C +G +  A  L   +      P   +++ LI GLCR
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +   A++L  EM     A    +  T+ ++I+G CKD  +D+A  L  +M D N+ PN
Sbjct: 456 NGDLSSAMELHREMAERGIAW---NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +T+N +I G+C V + ++A  L+ +M++ G++PD  T+ ++I+  C    + K N  + 
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            +       +  +  +L+ G    GR +    L+  M  +G + D+ S+ I++ A  K  
Sbjct: 573 DLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
             E +  L+REM  + ++P  I Y  ++  L +  N+  AL   D+M ++   P++ T  
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHT 692

Query: 439 TYIDGLCKNGFVLEA-----------VQVFQAIRNCKCEL-------------------- 467
             I+ LCK+G++  A           V   +   NC  +                     
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 752

Query: 468 ---RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I ++N LI GLCK G+++ A  L  ++   G  PD ++ ST+IH LCK G ++KA 
Sbjct: 753 HLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAF 812

Query: 525 DLLLDMEAKNCVPSEVTFCTLLR 547
           +L  +M  K   P  V +   +R
Sbjct: 813 ELWNEMLYKGLKPDVVAYNIFIR 835



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 258/543 (47%), Gaps = 5/543 (0%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N+   EAV   + M+ +  +    ++  L+    + ++ +  + +   +   G  P    
Sbjct: 246 NMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 305

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            + +I+ L K  +   AF +  ++      PN   +N LI+ LC   R  +A RLFK++ 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +PN VT+  LI+ LC+      AL LF++M ++     K  V  YNS+I+G CK G
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG---IKVTVYPYNSLINGYCKQG 422

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +D+A+ LL  M    + P   +Y+ LI G C   D   A  L  EM + G+  +  TF 
Sbjct: 423 SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFT 482

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+IN  CKD KMD+  RL + MI   V P+ VT+N +++G+CLVG I +A +L+  MV  
Sbjct: 483 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM 542

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G + D Y+Y  LI+  C    V  A     ++ +     +  +   LL GLF+ G   + 
Sbjct: 543 GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTET 602

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L D+M +  V  D  +F   +    K     ++  +F+ ++    +     Y C+I+ 
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L K   +  A   + ++   G  P+ VT + +I+ LCK G +  A  L  +M A N +P+
Sbjct: 663 LSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
           + T+   L  F       K    LH    +  + S +S +  ++  L K  K +E ++  
Sbjct: 723 KFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHLASIVSFNI-LIKGLCKAGKIQEAIDLM 780

Query: 599 RHL 601
           R +
Sbjct: 781 RKI 783



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 232/521 (44%), Gaps = 39/521 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  M      P   ++ IL+  L K    +  + LF ++   G+   ++  N L
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSL 414

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTP--------------------------------- 149
           IN  CK G    A  +L  +++   TP                                 
Sbjct: 415 INGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGI 474

Query: 150 --NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
             N  TF  LING C + ++ EAARLF K+      PN VTFN +I G C   N   A +
Sbjct: 475 AWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQ 534

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L+++MV E G   KPD  TY S+I GLC    V KA E +  +++     N  +  +L+ 
Sbjct: 535 LYDQMV-EMG--LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G      + E   L+ EM   GV+ D+V+F  ++    K    +K   L   M ++GV P
Sbjct: 592 GLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D + Y  ++D       + +A   +  MV  G   +  ++ +LIN  CK   +  A  L 
Sbjct: 652 DDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLC 711

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           +EML+  + P+  TYN  L      G++  A  L   M L   +    +F   I GLCK 
Sbjct: 712 KEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKA 770

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + EA+ + + I          +Y+ +I+ LCKMG +  A +L++ + +KG  PDVV  
Sbjct: 771 GKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           +  I W    G+ DKA  +  +M      P+  T+  LL G
Sbjct: 831 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 230/493 (46%), Gaps = 38/493 (7%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VLG  L S  T N  T + ++  L    +   A  LF K+       +   +   I   C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            +RN   A  L   M +E     K   V YN ++ GLCK+  V +A E+   M +  +  
Sbjct: 210 ESRNLDGARGLVVRMESEG---VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTA 266

Query: 258 NVITYNSLICGFCCVDDWK-----------------EAKCLFI----------------- 283
           + +TY +L+ GFC +++ +                 EA C F+                 
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 326

Query: 284 -EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            ++ D G+ P+V  +NA+I+  CK+ + D  +RL + M  RG+ P+ VTY  L+   C  
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G I  A  LF  M  KG +  VY YN LIN  CK   ++ A  L   M+ E + P+  +Y
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           + L++GL + G+L  A++L  +M    +  +++TF   I+G CK+  + EA ++F  + +
Sbjct: 447 SPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                   T+N +I G C +G ++ A +L+ ++   G  PD  T  ++I  LC    + K
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           AN+ + D+E    V +  +   LL G  +  + ++   L  +MA   + +  +S +  V 
Sbjct: 567 ANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 626

Query: 583 DLLSKDKKYRECL 595
             L +  K + C+
Sbjct: 627 AALKQHDKEKSCV 639



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 177/413 (42%), Gaps = 9/413 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD MI     P   +F +++              L+ ++   GL PD +    L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC     S A   +  +  S    N  +   L+ GL  EGR  E   L+ ++ V   
Sbjct: 555 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGV 614

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             ++V+F  ++    +  +   +  LF EM  E G   KPD + Y  +ID L K+  + +
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREM-KEQGV--KPDDIFYTCMIDALSKEENMIQ 671

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A     QM     +PN +T+  LI   C       A+ L  EM+   V P+  T+N  ++
Sbjct: 672 ALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLD 731

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           Y   +G M+K   L   M+Q G     V++N L+ G C  G+I  A +L   +   G   
Sbjct: 732 YFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSP 790

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  SY+ +I+  CK   +  A  L+ EML + ++P V+ YN  +      G    AL + 
Sbjct: 791 DCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIY 850

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             M  + V P+  T+   + G+      L     F   R  K  ++I  Y  +
Sbjct: 851 TNMIRSGVQPNWDTYRALLSGIS-----LMLHYDFSCFRGTKQYIQISVYELM 898



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 166/349 (47%), Gaps = 1/349 (0%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I  N  T + ++     +  +  A+ LF +M+ +GV  D   + A I   C+   +D  
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L+  M   GV    V YN LM G C   R+  A E+   MV+ G   D  +Y  L+  
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C+ +++E A+ +  +M+     PS    + ++  L +   + +A  L  K+    +VP+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            F +   ID LCKN    +A ++F+ +     E    TY  LI+ LCK G ++ A  LF 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           +++ KG    V   +++I+  CK+G +D+A  LL  M  +   P+  ++  L+ G  +N 
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             S  + L  +MA   +  ++ + ++ +++   KDKK  E    F  ++
Sbjct: 458 DLSSAMELHREMAERGIAWNNYTFTA-LINGFCKDKKMDEAARLFDKMI 505



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 6/297 (2%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           S+   L    + G  T  E  + +D M        + SFTI++    K    +    LF+
Sbjct: 585 SLTALLYGLFREGRFT--ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 642

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            +   G+ PD      +I+ L K      A     +++   ++PNTVT   LIN LC  G
Sbjct: 643 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSG 702

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
            +  A  L K++      PN  T+N  ++      +   A  L   M+    A     +V
Sbjct: 703 YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA----SIV 758

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           ++N +I GLCK G + +A +L+ ++ +   +P+ I+Y+++I   C + D  +A  L+ EM
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 818

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
           +  G++PDVV +N  I +    G+ DK   +   MI+ GV P+  TY +L+ G  L+
Sbjct: 819 LYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 159/542 (29%), Positives = 258/542 (47%), Gaps = 34/542 (6%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCL-CKMGITSGA 135
            P   +F  L+   A   ++   V  F R+    G  P  FV N ++  L    G    A
Sbjct: 136 QPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLA 195

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             +  R++ +   PN  T+N LI+GLC  G  ++A +LF ++      PNV T   L++ 
Sbjct: 196 LALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSS 255

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           +C       A  L   M ++    C PD VTYN+ + GLCK G VD+A E L  +  R+ 
Sbjct: 256 MCNAGQLKEAENLLHSMEDKG---CPPDEVTYNAFLSGLCKAGRVDEAIERLEAL--RHT 310

Query: 256 NPNVIT---YNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMD 311
              V+    Y+ LI G      ++E    ++E+++   V PD+V +  MI    + G+ +
Sbjct: 311 GTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTN 370

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
                 + M ++G  PDT  YN+L+   C  G +  AR L   MV      D+++Y  +I
Sbjct: 371 DAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMI 430

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND-- 429
              CK+Q V++A+ ++  M+     PSV+TYN L+ GL++   L +A  L  KM++ +  
Sbjct: 431 IGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNP 490

Query: 430 -----------VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
                       V DS T    ++ +C++G VL+A ++ + I +      + TYN L+NG
Sbjct: 491 SLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNG 550

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LCK+  L  A +LF  LQ KG   D +T  T+I  L +  + + A  L  D+      PS
Sbjct: 551 LCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPS 610

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK--LVVSDLSLSSKVVDLLSKDKKYRE-CL 595
              + +++R   +  K S+ + L       K  L+  D  +S       S  KK+ E CL
Sbjct: 611 MPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVIS-------SARKKFEEGCL 663

Query: 596 NQ 597
           ++
Sbjct: 664 HE 665



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 223/473 (47%), Gaps = 21/473 (4%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTL-V 204
             P T  F  LI    + GR  EA   F ++   F C P    +N ++  L  +   + +
Sbjct: 135 LQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPL 194

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL L+  MV    A C P+  TYN +I GLCK G    A +L  +M  R I PNV T+  
Sbjct: 195 ALALYNRMV---AAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTI 251

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+   C     KEA+ L   M D G  PD VT+NA ++  CK G++D+    LE +   G
Sbjct: 252 LLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTG 311

Query: 325 VNPDTVT-YNSLMDGFCLVGRISRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVED 382
                +  Y+ L+DG  L GR     + ++ ++ +     D+  Y I+I    +  +  D
Sbjct: 312 TFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTND 371

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A   + EM  +   P    YNTLL  L   G+L  A  L+ +M  N+VV D  T+ T I 
Sbjct: 372 AFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMII 431

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ------ 496
           GLCK   V EA+QVF  +    C   + TYN LI+GL +  RL+ A  LF++++      
Sbjct: 432 GLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPS 491

Query: 497 -------HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
                      + D  T   ++  +C+ GQ+ KA  LL  +     VP  VT+ TLL G 
Sbjct: 492 LFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGL 551

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +       + L  ++  +   + +++  + ++D L +  +Y + L  F+ +L
Sbjct: 552 CKVRNLDGALRLFRELQVKGFPLDEITYGT-LIDSLLRAHRYNDALTLFQDIL 603



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 228/526 (43%), Gaps = 68/526 (12%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T  +A+  FD MI    +P + + TILL+ +    Q     +L   +   G  PD    N
Sbjct: 226 TPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYN 285

Query: 121 LLINCLCKMGIT------------SGAFVVLGRILRSCF--------------------- 147
             ++ LCK G              +G FV LG    SC                      
Sbjct: 286 AFLSGLCKAGRVDEAIERLEALRHTGTFV-LGLKGYSCLIDGLFLAGRYEEGFQCYMEVL 344

Query: 148 -----TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                +P+ V +  +I G    GR  +A   F ++      P+   +NTL+  LC   + 
Sbjct: 345 EQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDL 404

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A  L  EMV     +   D+ TY ++I GLCK+  VD+A ++   M +   +P+V+TY
Sbjct: 405 DGARSLMSEMVRNNVVL---DIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTY 461

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQP--------------DVVTFNAMINYNCKDG 308
           N LI G       +EA+ LF +M + G  P              D  T   ++   C+ G
Sbjct: 462 NVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSG 520

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++ K  +LL  +I  GV PD VTYN+L++G C V  +  A  LF  +  KG   D  +Y 
Sbjct: 521 QVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYG 580

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI++  +  +  DA+ L++++L     PS+  YN+++  L ++  L  A+ L       
Sbjct: 581 TLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINL-----WF 635

Query: 429 DVVPDSFTFATYIDGLC------KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D +P  +      + +       + G + EAV+    I      +    Y   + GL + 
Sbjct: 636 DHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQA 695

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           GR++ A K+FH L+  G       C  +  +LC EG +  A D++L
Sbjct: 696 GRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVML 741



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 208/451 (46%), Gaps = 27/451 (5%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           + + + +   SP +  +TI++   A+  + +   + F  +   G  PD F  N L+  LC
Sbjct: 340 YMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALC 399

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
             G   GA  ++  ++R+    +  T+  +I GLC E  + EA ++F  +    C P+V+
Sbjct: 400 DAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVM 459

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVN----------EFGAICKPDVVTYNSIIDGLCKD 237
           T+N LI+GL R      A  LF +M              GA    D  T   +++ +C+ 
Sbjct: 460 TYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQS 519

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G V KA +LL  + D  + P+V+TYN+L+ G C V +   A  LF E+   G   D +T+
Sbjct: 520 GQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITY 579

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
             +I+   +  + +    L + ++  G  P    YNS+M   C + ++S+A  L+   + 
Sbjct: 580 GTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLP 639

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLY---REML---SERIRPSVITYNTLLSGLFQ 411
           +  ++++ + + +I++  K  K E+  CL+   RE++    E    +   Y   L GL Q
Sbjct: 640 R--KYNLLAQDEVISSARK--KFEEG-CLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQ 694

Query: 412 VGNLGDALKLIDKMQLN--DVVPD-SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
            G + DALK+   ++ +  D+ P      + Y   LC  G +  AV V          +R
Sbjct: 695 AGRIEDALKIFHILEESGIDITPACCVHLSKY---LCLEGNLGAAVDVMLYTLKKGFTMR 751

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
               N L+  LC   R K A  L  R+   G
Sbjct: 752 RYVGNRLLCSLCIHHRRKDAQALAWRMHLVG 782



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 137/314 (43%), Gaps = 40/314 (12%)

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARE--------------------------------- 350
           G+ P T  + +L+      GR   A E                                 
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193

Query: 351 ----LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
               L+  MV+ GC  +  +YN+LI+  CK     DA+ L+ EM+S  I P+V T+  LL
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC- 465
           S +   G L +A  L+  M+     PD  T+  ++ GLCK G V EA++  +A+R+    
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTF 313

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI-PDVVTCSTMIHWLCKEGQMDKAN 524
            L ++ Y+CLI+GL   GR +   + +  +  +  + PD+V  + MI    + G+ + A 
Sbjct: 314 VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAF 373

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
               +M+ K   P    + TLL+             L+ +M    +V+ D+   + ++  
Sbjct: 374 AFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVL-DIHTYTTMIIG 432

Query: 585 LSKDKKYRECLNQF 598
           L K++   E +  F
Sbjct: 433 LCKEQLVDEAMQVF 446



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 144/353 (40%), Gaps = 54/353 (15%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV---- 118
           +EA+  FD M+++   P + ++ +L+  L +  + +    LF ++   G  P LF+    
Sbjct: 440 DEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEV-GNNPSLFLRLTL 498

Query: 119 ----------LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
                     L  L+  +C+ G    A+ +L  I+ S   P+ VT+N L+NGLC    + 
Sbjct: 499 GANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLD 558

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
            A RLF++L V     + +T+ TLI+ L R      AL LF+++++  G    P +  YN
Sbjct: 559 GALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGT---PSMPIYN 615

Query: 229 SIIDGLCK------------------------------------DGFVDKAKELLLQMKD 252
           S++  LC+                                    +G + +A   L+++  
Sbjct: 616 SMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQ 675

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
              + N   Y   + G       ++A  +F  + ++G+         +  Y C +G +  
Sbjct: 676 EYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGA 735

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
              ++   +++G        N L+   C+  R   A+ L   M   G   D Y
Sbjct: 736 AVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHRRKDAQALAWRMHLVGYDMDAY 788


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 260/535 (48%), Gaps = 3/535 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF  M+     P + +F ILL  L +  ++     L +++  +G++P     N L+N  C
Sbjct: 162 FFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYC 221

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K G    A  ++  +       +  T+N  I+ LC + R  +   L K++      PN +
Sbjct: 222 KKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEI 281

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+NTLI+G  R     VA K+F+EM + F  +  P+ +TYN++I G C  G + +A  L+
Sbjct: 282 TYNTLISGFVREGKIEVATKVFDEM-SLFNLL--PNSITYNTLIAGHCTTGNIGEALRLM 338

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M    + PN +TY +L+ G     ++     +   M   GV+   +++ AMI+  CK+
Sbjct: 339 DVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKN 398

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +++  +LL+ M++  VNPD VT++ L++GF  VG+I+ A+E+   M   G   +   Y
Sbjct: 399 GMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILY 458

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           + LI   CK   +++A+  Y  M          T N L++   + G L +A   ++ M  
Sbjct: 459 STLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSR 518

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             + P+S TF   I+G   +G  L+A  VF  + +      + TY  L+ GLC  G +  
Sbjct: 519 MGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINE 578

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A K FHRL+      D V  +T +   C+ G +  A  L+ +M   + +P   T+  L+ 
Sbjct: 579 ALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIA 638

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           G  +  K    ++L  K   + L+  + ++ + +VD L K    R  L  F  +L
Sbjct: 639 GLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEML 693



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 271/544 (49%), Gaps = 29/544 (5%)

Query: 74  KMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG 130
           KM+ S   P   ++  LL    K  +Y     L   + S G+  D+   N+ I+ LC+  
Sbjct: 200 KMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDS 259

Query: 131 ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
            ++  +++L R+ R+   PN +T+N LI+G   EG+I  A ++F ++++F   PN +T+N
Sbjct: 260 RSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYN 319

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           TLI G C T N   AL+L + MV+      +P+ VTY ++++GL K+        +L +M
Sbjct: 320 TLIAGHCTTGNIGEALRLMDVMVSHG---LRPNEVTYGALLNGLYKNAEFGMVSSILERM 376

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
           +   +  + I+Y ++I G C     +EA  L  +M+   V PDVVTF+ +IN   + GK+
Sbjct: 377 RMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKI 436

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           +    ++  M + G+ P+ + Y++L+  +C +G +  A   +  M   G   D ++ N+L
Sbjct: 437 NNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVL 496

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK---LIDKMQL 427
           +   C+  K+E+A      M    + P+ +T++ +++G    GN GDALK   + DKM  
Sbjct: 497 VATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIING---YGNSGDALKAFSVFDKMNS 553

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
               P  FT+   + GLC  G + EA++ F  +R     +    +N  +   C+ G L  
Sbjct: 554 FGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSD 613

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD---MEAKNCVPSEVTFCT 544
           A  L + +     +PD  T + +I  LCK+G++  A  LLL    +E     P+   + +
Sbjct: 614 AIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAA--LLLSGKAIEKGLLSPNPAVYTS 671

Query: 545 LLRGFVQNNKKSKVVVLLHKM---------AAEKLVVSDLSL---SSKVVDLLSKDKKYR 592
           L+ G +++      + +  +M          A  +++   S    +SKV D+LS  K   
Sbjct: 672 LVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKN 731

Query: 593 ECLN 596
            C N
Sbjct: 732 LCFN 735



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 215/452 (47%), Gaps = 40/452 (8%)

Query: 150 NTVTFNFLINGLCAEGRIM-EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           N   F+ LI  +C   R++ +A + F  +     +P+V T N ++  L + +   +    
Sbjct: 104 NPAVFDLLIR-VCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSF 162

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F+ M+ +   IC PDV T+N +++ LC+ G    A  LL +M++  + P  +TYN+L+  
Sbjct: 163 FKGMLAK--GIC-PDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNW 219

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
           +C    +K A  L   M   G+  DV T+N  I+  C+D +  K   LL+ M +  V P+
Sbjct: 220 YCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPN 279

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
            +TYN+L+ GF   G+I  A ++F  M       +  +YN LI  +C    + +A+ L  
Sbjct: 280 EITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMD 339

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
            M+S  +RP+ +TY  LL+GL++    G    ++++M++  V     ++   IDGLCKNG
Sbjct: 340 VMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNG 399

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGL----------------------------- 479
            + EAVQ+   +        + T++ LING                              
Sbjct: 400 MLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYS 459

Query: 480 ------CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
                 CKMG LK A   +  + H G + D  TC+ ++   C+ G++++A   +  M   
Sbjct: 460 TLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRM 519

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
              P+ VTF  ++ G+  +    K   +  KM
Sbjct: 520 GLDPNSVTFDCIINGYGNSGDALKAFSVFDKM 551



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 243/545 (44%), Gaps = 41/545 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV   D M+K+  +P + +F++L+    +  + +    +  ++   GL P+  + + LI
Sbjct: 403 EAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLI 462

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              CKMG    A      +  S    +  T N L+   C  G++ EA      ++    D
Sbjct: 463 YNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLD 522

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VTF+ +ING   + + L A  +F++M N FG    P + TY  ++ GLC  G +++A
Sbjct: 523 PNSVTFDCIINGYGNSGDALKAFSVFDKM-NSFGHF--PSLFTYGGLLKGLCIGGHINEA 579

Query: 244 KELLLQMK-DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            +   +++   N   NVI +N+ +   C   +  +A  L  EM+ N   PD  T+  +I 
Sbjct: 580 LKFFHRLRCIPNAVDNVI-FNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIA 638

Query: 303 YNCKDGKM------------------------DKVNRLL------------ELMIQRGVN 326
             CK GK+                          V+ LL            E M+ + V 
Sbjct: 639 GLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVE 698

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PDTV +N ++D +   G+ S+  ++  +M SK    ++ +YNIL++   K   +     L
Sbjct: 699 PDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFML 758

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           Y++M+     P   ++++L+ G  Q  +   A+K++  + L   V D FTF   I   C+
Sbjct: 759 YKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCE 818

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
              + +A ++ + +        ++TYN L NGL +      A ++   L   G +P    
Sbjct: 819 RNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQ 878

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
             T+I+ +C+ G +  A  L  +M+        V    ++RG   + K    + +L  M 
Sbjct: 879 YITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLML 938

Query: 567 AEKLV 571
             +++
Sbjct: 939 EMQII 943



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 211/456 (46%), Gaps = 22/456 (4%)

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE------------ 210
           A  R +      K LN     PN+   N + + +C T + LV  +++             
Sbjct: 25  ASLRPVHGRLALKFLNWVIKQPNL-ELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQL 83

Query: 211 --EMVNEFGA------ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
              + + FGA      IC  +   ++ +I    ++  V  A +    M  R +NP+V T 
Sbjct: 84  PIGLNSVFGALMETYPICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTC 143

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N ++               F  M+  G+ PDV TFN ++N  C+ GK      LL  M +
Sbjct: 144 NMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEE 203

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            GV P  VTYN+L++ +C  GR   A +L   M SKG   DV +YN+ I+  C+D +   
Sbjct: 204 SGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAK 263

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
              L + M    + P+ ITYNTL+SG  + G +  A K+ D+M L +++P+S T+ T I 
Sbjct: 264 GYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIA 323

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           G C  G + EA+++   + +        TY  L+NGL K         +  R++  G   
Sbjct: 324 GHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRV 383

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
             ++ + MI  LCK G +++A  LL DM   +  P  VTF  L+ GF +  K +    ++
Sbjct: 384 SHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIM 443

Query: 563 HKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            KM    LV + + L S ++    K    +E LN +
Sbjct: 444 CKMYKTGLVPNGI-LYSTLIYNYCKMGYLKEALNAY 478



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 235/551 (42%), Gaps = 74/551 (13%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF------ 117
            EA YF + M +M   P   +F  ++     +       S+F ++NS G FP LF      
Sbjct: 508  EAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLL 567

Query: 118  -----------------------------VLNLLINCLCKMGITSGAFVVLGRILRSCFT 148
                                         + N  +   C+ G  S A  ++  ++ + F 
Sbjct: 568  KGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFL 627

Query: 149  PNTVTFNFLINGLCAEGRIMEAARLF-KKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+  T+  LI GLC +G+I+ A  L  K +      PN   + +L++GL +  +   AL 
Sbjct: 628  PDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALY 687

Query: 208  LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
            +FEEM+N+     +PD V +N IID   + G   K  ++L  MK +N+  N+ TYN L+ 
Sbjct: 688  IFEEMLNK---DVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLH 744

Query: 268  GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            G+           L+ +M+ +G  PD  +++++I   C+    D   ++L  +   G   
Sbjct: 745  GYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVI 804

Query: 328  DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
            D  T+N L+  FC    + +A EL   M       +V +YN L N   +      A  + 
Sbjct: 805  DRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVL 864

Query: 388  REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL-------------------- 427
            + +L     P+   Y TL++G+ +VGN+  A+KL D+M+                     
Sbjct: 865  QVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANS 924

Query: 428  ---------------NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
                             ++P   TF T +   CK   V +A+++   + +C  +L +  Y
Sbjct: 925  KKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAY 984

Query: 473  NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
            N LI+GLC  G ++ A KL+  ++ +   P+      +I   C      ++  LL D++ 
Sbjct: 985  NVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQD 1044

Query: 533  KNCVPSEVTFC 543
            +  +     FC
Sbjct: 1045 RELMRLNQQFC 1055


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 253/544 (46%), Gaps = 60/544 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+ F + M      P + +++ LL      KQ      +   +   G +P   + N L
Sbjct: 278 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 337

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC----------------AEGR 166
           ++  C  G  S A+ +L ++++    P  V +N LI  +C                A   
Sbjct: 338 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSE 397

Query: 167 IMEAARLFKKLNVFA-----CD--------------------PNVVTFNTLINGLCRTRN 201
           ++ A  +  K+NV +     C                     P+  T++ ++N LC    
Sbjct: 398 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 457

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
             +A  LFEEM  + G +   DV TY  ++D  CK G +++A++   +M++    PNV+T
Sbjct: 458 MELAFLLFEEM--KRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 514

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y +LI  +        A  LF  M+  G  P++VT++A+I+ +CK G+++K  ++ E M 
Sbjct: 515 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 574

Query: 322 ----------------QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
                                P+ VTY +L+DGFC   R+  AR+L  +M  +GC  +  
Sbjct: 575 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 634

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            Y+ LI+  CK  K+++A  +  EM       ++ TY++L+   F+V     A K++ KM
Sbjct: 635 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 694

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
             N   P+   +   IDGLCK G   EA ++ Q +    C+  + TY  +I+G   +G++
Sbjct: 695 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 754

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           +T  +L  R+  KG  P+ VT   +I   CK G +D A++LL +M+  +       +  +
Sbjct: 755 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 814

Query: 546 LRGF 549
           + GF
Sbjct: 815 IEGF 818



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 251/533 (47%), Gaps = 57/533 (10%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           ++SFT  L    K   Y+   S+ + +   G  PD    + ++N LC       AF++  
Sbjct: 410 VSSFTRCLCSAGK---YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 466

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            + R     +  T+  +++  C  G I +A + F ++    C PNVVT+  LI+   + +
Sbjct: 467 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 526

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM---------- 250
               A +LFE M++E    C P++VTY+++IDG CK G V+KA ++  +M          
Sbjct: 527 KVSYANELFETMLSEG---CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 583

Query: 251 ------KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
                  D +  PNV+TY +L+ GFC     +EA+ L   M   G +P+ + ++A+I+  
Sbjct: 584 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 643

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK GK+D+   +   M + G      TY+SL+D +  V R   A ++   M+   C  +V
Sbjct: 644 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 703

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y  +I+  CK  K ++A  L + M  +  +P+V+TY  ++ G   +G +   L+L+++
Sbjct: 704 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 763

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFV---------------------------------L 451
           M    V P+  T+   ID  CKNG +                                 +
Sbjct: 764 MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI 823

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ-HKGPIPDVV-TCST 509
           E++ +   I        +  Y  LI+ L K  RL+ A +L   +      + D   T ++
Sbjct: 824 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 883

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           +I  LC   +++ A  L  +M  K  +P   +FC+L++G  +N+K S+ ++LL
Sbjct: 884 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 158/582 (27%), Positives = 247/582 (42%), Gaps = 98/582 (16%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  +++  L+    K  + D+   + + ++   L  D F L      LCK+G    A  +
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 251

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +    F P+TV +  LI+GLC      EA     ++   +C PNVVT++TL+ G C 
Sbjct: 252 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG-CL 307

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +  L   K    M+   G  C P    +NS++   C  G    A +LL +M      P 
Sbjct: 308 NKKQLGRCKRVLNMMMMEG--CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPG 365

Query: 259 VITYNSL---ICG--------------------------------------FCCVDDWKE 277
            + YN L   ICG                                       C    +++
Sbjct: 366 YVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEK 425

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +  EM+  G  PD  T++ ++NY C   KM+    L E M + G+  D  TY  ++D
Sbjct: 426 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 485

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC  G I +AR+ F  M   GC  +V +Y  LI+A  K +KV  A  L+  MLSE   P
Sbjct: 486 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 545

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD----------------SFTFATYI 441
           +++TY+ L+ G  + G +  A ++ ++M  +  VPD                  T+   +
Sbjct: 546 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 605

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT-------------- 487
           DG CK+  V EA ++  A+    CE     Y+ LI+GLCK+G+L                
Sbjct: 606 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 665

Query: 488 ---------------------ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
                                A K+  ++      P+VV  + MI  LCK G+ D+A  L
Sbjct: 666 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 725

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +  ME K C P+ VT+  ++ GF    K    + LL +M ++
Sbjct: 726 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 767



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 218/474 (45%), Gaps = 32/474 (6%)

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           LN+L+   C+ G  S A   LGR+    F P+  T+N LI       R+  A+ + ++++
Sbjct: 162 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 221

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
           +     +  T       LC+      AL L E     F     PD V Y  +I GLC+  
Sbjct: 222 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENF----VPDTVFYTKLISGLCEAS 275

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC--LFIEMMDNGVQPDVVT 296
             ++A + L +M+  +  PNV+TY++L+CG  C++  +  +C  +   MM  G  P    
Sbjct: 276 LFEEAMDFLNRMRATSCLPNVVTYSTLLCG--CLNKKQLGRCKRVLNMMMMEGCYPSPKI 333

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL------VGRISRARE 350
           FN++++  C  G      +LL+ M++ G  P  V YN L+   C          +  A +
Sbjct: 334 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEK 393

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
            +  M++ G   +  + +      C   K E A  + REM+ +   P   TY+ +L+ L 
Sbjct: 394 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 453

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
               +  A  L ++M+   +V D +T+   +D  CK G + +A + F  +R   C   + 
Sbjct: 454 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 513

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY  LI+   K  ++  A +LF  +  +G +P++VT S +I   CK GQ++KA  +   M
Sbjct: 514 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 573

Query: 531 EAKNCVP------------SE----VTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
                VP            SE    VT+  LL GF ++++  +   LL  M+ E
Sbjct: 574 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 627



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 208/462 (45%), Gaps = 54/462 (11%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G I   +A  +F+ M ++  +P + ++T L+    K K+      LF+ + S G  P+
Sbjct: 489 KAGLI--EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 546

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRS----------------CFTPNTVTFNFLIN 159
           +   + LI+  CK G    A  +  R+  S                   PN VT+  L++
Sbjct: 547 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 606

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-FGA 218
           G C   R+ EA +L   +++  C+PN + ++ LI+GLC+      A ++  EM    F A
Sbjct: 607 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 666

Query: 219 I-------------------------------CKPDVVTYNSIIDGLCKDGFVDKAKELL 247
                                           C P+VV Y  +IDGLCK G  D+A +L+
Sbjct: 667 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 726

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
             M+++   PNV+TY ++I GF  +   +    L   M   GV P+ VT+  +I++ CK+
Sbjct: 727 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 786

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           G +D  + LLE M Q      T  Y  +++GF        +  L   +        +  Y
Sbjct: 787 GALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN--KEFIESLGLLDEIGQDDTAPFLSVY 844

Query: 368 NILINANCKDQKVEDAVCLYREM--LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            +LI+   K Q++E A+ L  E+   S  +     TYN+L+  L     +  A +L  +M
Sbjct: 845 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 904

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
               V+P+  +F + I GL +N  + EA+ +   I +  C L
Sbjct: 905 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVCPL 946


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 246/503 (48%), Gaps = 39/503 (7%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           + +L KN  +D V   +    + G     F  +  I+ LC+         +L  + +   
Sbjct: 200 IGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGC 259

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
           +P+    N  I  LC + R+ +A ++ +K+      P+VVT+ T+++GLC  +    A+ 
Sbjct: 260 SPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIG 319

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L+EEMV       KPDV +  ++I GLCK+  VD+A EL  +M   +I  +V  YN+LI 
Sbjct: 320 LWEEMVKR---DLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALIS 376

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GF       +A  +   M  NG +PD+VT+N ++N+ C  G M+K  +L+  M   GVNP
Sbjct: 377 GFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNP 436

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D  +YN L+ G C   ++ +A       +  G   D  S NILI+A CK +KV+ A+ L+
Sbjct: 437 DRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELF 496

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           +EM  + ++   +TY TL++GLF VG    A +L ++M    + P+              
Sbjct: 497 KEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPN-------------- 542

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
                                +  YN +++ LCK+G  K A  +F  +  K   PD VT 
Sbjct: 543 ---------------------VNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTF 581

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +T+I+WL K  +  +A +L  DM  +   P  +TF  L+ G + +  KS +   + +   
Sbjct: 582 NTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLL-DEGKSTLAYEVWEYMM 640

Query: 568 EKLVVSDLSLSSKVVDLLSKDKK 590
           E  ++ D  +S +++ +L    K
Sbjct: 641 ENGIILDREVSERLISVLKSKNK 663



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 190/387 (49%), Gaps = 3/387 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K+  SP + +  I +  L K  +    + + +++ + G  PD+     +++ LC    
Sbjct: 254 MDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKK 313

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            + A  +   +++    P+  +   LI GLC   ++ EA  L  ++     + +V  +N 
Sbjct: 314 FAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNA 373

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+G  R  +   A K+   M       C+PD+VTYN +++  C  G ++KA++L+ +M+
Sbjct: 374 LISGFWRAGSIDKAYKIISFMRTNG---CEPDIVTYNILLNHYCTIGMMEKAEKLIRKME 430

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              +NP+  +YN L+ G C      +A     + M+ G   D V+ N +I+  CK  K+ 
Sbjct: 431 TSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVK 490

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               L + M  +G+  D VTY +L++G   VG  + A ELF  M++     +V  YNI++
Sbjct: 491 SALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIML 550

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +  CK    + A  ++  M+ + + P  +T+NTL+  L +     +AL L   M+   V 
Sbjct: 551 HHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVE 610

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           PD+ TF   I GL   G    A +V++
Sbjct: 611 PDTLTFKYLISGLLDEGKSTLAYEVWE 637



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 175/370 (47%), Gaps = 3/370 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   + M     SP + ++  +++ L  NK++   + L++ +    L PD+F    LI
Sbjct: 281 DALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALI 340

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LCK      AF +  R+L      +   +N LI+G    G I +A ++   +    C+
Sbjct: 341 FGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCE 400

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++VT+N L+N  C       A KL  +M     +   PD  +YN ++ GLCK   +DKA
Sbjct: 401 PDIVTYNILLNHYCTIGMMEKAEKLIRKMET---SGVNPDRYSYNQLLKGLCKTHQLDKA 457

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
              +    +     + ++ N LI  FC     K A  LF EM   G+Q D VT+  +IN 
Sbjct: 458 FAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLING 517

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
               G  +    L E M+   ++P+   YN ++   C VG   RA+ +F  M+ K    D
Sbjct: 518 LFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPD 577

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             ++N LI    K  +  +A+ L+++M +  + P  +T+  L+SGL   G    A ++ +
Sbjct: 578 TVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWE 637

Query: 424 KMQLNDVVPD 433
            M  N ++ D
Sbjct: 638 YMMENGIILD 647



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 187/409 (45%), Gaps = 9/409 (2%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R  F  +     +L++ L  +G     +    ++       +   +  L++G  R     
Sbjct: 116 RPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFD 175

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD---GFVDKAKELLLQMKDRNINPNVI 260
             ++ F+EMV    + C+   V YN  I  L K+     V+K  ++ L  K   + P   
Sbjct: 176 SVIETFDEMVM---SGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALA-KGFCLTP--F 229

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY+  I   C  +  +  + L ++M   G  PD+   N  I Y CK  ++    +++E M
Sbjct: 230 TYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKM 289

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
             +G +PD VTY +++ G C   + + A  L+  MV +  + DV+S   LI   CK+ KV
Sbjct: 290 RTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKV 349

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A  L   ML+  I  SV  YN L+SG ++ G++  A K+I  M+ N   PD  T+   
Sbjct: 350 DEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNIL 409

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           ++  C  G + +A ++ + +          +YN L+ GLCK  +L  A          G 
Sbjct: 410 LNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGG 469

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
             D V+C+ +I   CK  ++  A +L  +M  K      VT+ TL+ G 
Sbjct: 470 FCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGL 518



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 204/450 (45%), Gaps = 14/450 (3%)

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
           +    L   +C+E  ++E  RL  +L     DP VV  N ++ GL    ++  A++ +  
Sbjct: 64  IILQALERSMCSEP-LVELERLDVEL-----DPIVV--NLVVRGLS---DSETAVRFYWW 112

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
             +  G       + Y  ++  L  DG      E L ++K + +  +   Y  L+ G+  
Sbjct: 113 AESRPGFDHSQFAIAY--LVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVR 170

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
              +      F EM+ +G +   V +N  I    K+   D V +  ++ + +G      T
Sbjct: 171 AGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFT 230

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y+  +   C   RI   +EL V M   GC  D+++ NI I   CK  ++ DA+ +  +M 
Sbjct: 231 YSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMR 290

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
           ++   P V+TY T++SGL       +A+ L ++M   D+ PD F+    I GLCKN  V 
Sbjct: 291 TKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVD 350

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           EA ++   +     EL +  YN LI+G  + G +  A K+   ++  G  PD+VT + ++
Sbjct: 351 EAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILL 410

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           +  C  G M+KA  L+  ME     P   ++  LL+G  + ++  K    +     E   
Sbjct: 411 NHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSD-HMEVGG 469

Query: 572 VSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             D    + ++D   K KK +  L  F+ +
Sbjct: 470 FCDTVSCNILIDAFCKTKKVKSALELFKEM 499



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 153/299 (51%), Gaps = 7/299 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA      M+ +     +  +  L++   +    D    +   + +NG  PD+   N+L
Sbjct: 350 DEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNIL 409

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA-ARLFKKLNVFA 181
           +N  C +G+   A  ++ ++  S   P+  ++N L+ GLC   ++ +A A +   + V  
Sbjct: 410 LNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGG 469

Query: 182 -CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
            CD   V+ N LI+  C+T+    AL+LF+EM  +     + D VTY ++I+GL   G+ 
Sbjct: 470 FCD--TVSCNILIDAFCKTKKVKSALELFKEMGYKG---MQADAVTYGTLINGLFSVGYY 524

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           + A+EL  QM +  I+PNV  YN ++   C V  +K A+ +F  M+   V PD VTFN +
Sbjct: 525 NLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTL 584

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           I +  K  +  +   L + M  RGV PDT+T+  L+ G    G+ + A E++  M+  G
Sbjct: 585 IYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENG 643


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 247/501 (49%), Gaps = 15/501 (2%)

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
             L  RL   G+ P     N +   LC++ +         ++ +     NT ++N L+  
Sbjct: 211 APLLLRLRQYGISPSPESCNAV---LCRLPLDEAV-----QLFQELPEKNTCSYNILLKA 262

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
           LC  GRI +A +LF ++   A  P+VVT+  +++G C       A+KL  EM    G   
Sbjct: 263 LCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR-GLEL 318

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            P  V Y S+I  LC +G V  A  ++  M    +  +   + +++ GFC   D   A+ 
Sbjct: 319 NP--VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            F EM   G+  D VT+ A+IN  C+ G++ +  R+L+ M  +G++ D VTY  L+DG+C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
            VG+++ A  +   MV K    +V +Y  L +  CK   V  A  L  EM S+ +  ++ 
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYN+L++GL + GNL  A++ +  M    + PD +T+ T I  LC++  +  A  + Q +
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            +   +  I TYN L+NG C  GR++   +L   +  K   P+  T ++++   C E  M
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
               ++   M ++  VP+E T+  L++G  +  +  K  +  H    EK      S  + 
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCK-ARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 581 VVDLLSKDKKYRECLNQFRHL 601
           ++ LL+K KK+ E    F  +
Sbjct: 676 LIRLLNKKKKFTEARRLFEKM 696



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 193/361 (53%), Gaps = 7/361 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           FT +++   +        + F  +   GL  D      LIN LC+ G    A  VL  + 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                 + VT+  LI+G C  G++ EA  +  K+      PNVVT+  L +GLC+  +  
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A +L  EM ++   +   ++ TYNS+I+GLCK G +++A   ++ M +  + P+V TY 
Sbjct: 478 AANELLHEMCSKGLEL---NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           ++I   C   +   A  L  EM+D G++P +VT+N ++N  C  G+++   RLLE M+++
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            ++P+T TYNSLM  +C+   +    E++  M+S+    +  +YNILI  +CK + +++A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV--PDSFTFATYI 441
           +  + EM+ +  R +  +YN L+  L +     +A +L +KM+   +   PD + F  YI
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF--YI 712

Query: 442 D 442
           D
Sbjct: 713 D 713



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 209/409 (51%), Gaps = 21/409 (5%)

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
            F+ + V+F+ L+  LC     + +A L  +L  +   P+  + N +   LCR       
Sbjct: 193 AFSSDPVSFDLLL--LC-----LPSAPLLLRLRQYGISPSPESCNAV---LCRLP----- 237

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
               +E V  F  + + +  +YN ++  LC  G +  A +L  +M      P+V+TY  +
Sbjct: 238 ---LDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIM 291

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + G+C + + + A  L  EM   G++ + V + ++I   C +G++    R++E M+  GV
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             D   + ++M GFC  G ++ AR  F  M  +G   D  +Y  LIN  C+  ++++A  
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           + +EM  + +    +TY  L+ G  +VG + +A  + +KM    V P+  T+    DGLC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G V  A ++   + +   EL I TYN LINGLCK G L+ A +    +   G  PDV 
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVY 531

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           T +T+I  LC+  ++D+A+ LL +M  K   P+ VT+  L+ GF  + +
Sbjct: 532 TYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 237/511 (46%), Gaps = 45/511 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F  +    P     S+ ILL  L    +      LF  + S    PD+    ++
Sbjct: 239 DEAVQLFQEL----PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIM 291

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C +     A  +L  +       N V +  +I  LC EG++ +A R+ + + +   
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +   F T+++G CR  +   A   F+EM     A    D VTY ++I+GLC+ G + +
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA---DGVTYTALINGLCRAGELKE 408

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ +L +M+D+ ++ + +TY  LI G+C V    EA  +  +M+   V P+VVT+ A+ +
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G +   N LL  M  +G+  +  TYNSL++G C  G + +A    + M   G + 
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DVY+Y  +I A C+ ++++ A  L +EML + I+P+++TYN L++G    G +    +L+
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M   ++ P++                                    TYN L+   C  
Sbjct: 589 EWMLEKNIHPNT-----------------------------------TTYNSLMKQYCIE 613

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             +K+  +++  +  +  +P+  T + +I   CK   M +A     +M  K    +  ++
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
             L+R   +  K ++   L  KM  E+L   
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAE 704



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 180/358 (50%), Gaps = 3/358 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           +FD M K   +    ++T L+  L +  +      + + +   GL  D     +LI+  C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K+G  + AF+V  ++++   TPN VT+  L +GLC +G +  A  L  ++     + N+ 
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+N+LINGLC+  N   A++   +M +E G   KPDV TY +II  LC+   +D+A  LL
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDM-DEAG--LKPDVYTYTTIIGALCQSKELDRAHSLL 553

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M D+ I P ++TYN L+ GFC     +  K L   M++  + P+  T+N+++   C +
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             M     + + M+ + V P+  TYN L+ G C    +  A      M+ KG R    SY
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           N LI    K +K  +A  L+ +M  ER+      YN  +   F   NL   L L D++
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 5/282 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +T  EA    + M++ + +P + ++T L   L K         L   + S GL  +
Sbjct: 437 KVGKMT--EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F  N LIN LCK G    A   +  +  +   P+  T+  +I  LC    +  A  L +
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P +VT+N L+NG C +       +L E M+ +      P+  TYNS++   C
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN---IHPNTTTYNSLMKQYC 611

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            +  +    E+   M  + + PN  TYN LI G C   + KEA     EM++ G +    
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           ++NA+I    K  K  +  RL E M +  +  +   YN  +D
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 255/510 (50%), Gaps = 9/510 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  +  +L  L    ++  +  ++  +  +G+  +++  N+L+  LCK      A  +
Sbjct: 141 PSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKL 200

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +      P+ V++  +++ +C  G++ EA  L  ++  F     V  +N LING CR
Sbjct: 201 LAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VPVYNALINGFCR 255

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                   +LF EM  E      PDV+TY+++I+ L + G V+ A  +L +M  R  +PN
Sbjct: 256 EHKMEEVFELFNEMAVEG---IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPN 312

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V T+ SL+ G+       EA  L+  M+  G +P+ V +N +I+  C  GKM +   + +
Sbjct: 313 VHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQ 372

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M + GV P+  TY++L+DGF   G +  A E++  M++ GC  +V  Y  +++  C++ 
Sbjct: 373 KMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNS 432

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
               A+ L   M +    P+ IT+NT + GL   G    A+K++++M+     P+  T+ 
Sbjct: 433 MFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYN 492

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +DGL       EA+Q+   I   + +  + TYN +++G C  G  K A ++  +L   
Sbjct: 493 EVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVG 552

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN-CVPSEVTFCTLLRGFVQNNKKSK 557
           G  PD +T +T+I+  CK+G++  A  L+  +  K    P   T+ +LL G        +
Sbjct: 553 GTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDE 612

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            VV L KM  E +  +  + ++ V  L SK
Sbjct: 613 AVVHLDKMINEGICPNRATWNALVRGLFSK 642



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 248/490 (50%), Gaps = 17/490 (3%)

Query: 65  AVYFFDCMI---KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF--PDLFVL 119
           A++FF  +      K +P   ++T ++  L   +  D +  L + +   G+    DLFV+
Sbjct: 56  ALHFFKSIANSNSFKHTP--LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVI 113

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
             +IN   + G+   A     RI      P+   +N +++ L +E +      ++  +  
Sbjct: 114 --VINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKR 171

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
              + NV T+N L+  LC+      A KL  EM  +    C PD V+Y +++  +C+ G 
Sbjct: 172 DGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKG---CIPDAVSYTTVVSSMCRLGK 228

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           V++A+EL +++K       V  YN+LI GFC     +E   LF EM   G+ PDV+T++ 
Sbjct: 229 VEEARELSMRIKSF-----VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYST 283

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +IN   + G ++    +L  M  RG +P+  T+ SLM G+ + GR+  A +L+  M+ +G
Sbjct: 284 VINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEG 343

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              +  +YN LI+  C   K+ +AV + ++M    + P+  TY+TL+ G  + G+L  A 
Sbjct: 344 SEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGAS 403

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           ++ +KM  N  +P+   +   +D LC+N     A+ + + + N  C     T+N  I GL
Sbjct: 404 EIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGL 463

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C  G+ + A K+ ++++  G  P+V T + ++  L    +  +A  ++ ++E      + 
Sbjct: 464 CCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNL 523

Query: 540 VTFCTLLRGF 549
           VT+ T+L GF
Sbjct: 524 VTYNTILSGF 533



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 229/477 (48%), Gaps = 49/477 (10%)

Query: 157 LINGLCAEGRIMEAARLFKKL---NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV 213
           ++N L  E  I+ A   FK +   N F   P  +T+ T+I  L   R+ +  ++   +++
Sbjct: 43  VLNKLKNEPNILLALHFFKSIANSNSFKHTP--LTYTTMIKRLGYERD-IDGIQYLLQLM 99

Query: 214 NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD 273
              G  C  D+     +I+   + G  ++A +   ++ +    P+V  YN ++      +
Sbjct: 100 KLEGISCNEDLFVI--VINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSEN 157

Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
            ++    ++  M  +G++ +V T+N ++   CK+ ++D   +LL  M  +G  PD V+Y 
Sbjct: 158 KFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYT 217

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +++   C +G++  AREL     S   +  V  YN LIN  C++ K+E+   L+ EM  E
Sbjct: 218 TVVSSMCRLGKVEEAREL-----SMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVE 272

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA--------------- 438
            I P VITY+T+++ L ++GN+  AL ++ KM L    P+  TF                
Sbjct: 273 GIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEA 332

Query: 439 --------------------TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
                               T I GLC  G ++EAV V Q +          TY+ LI+G
Sbjct: 333 LDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDG 392

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
             K G L  A ++++++   G +P+VV  + M+  LC+    + A  L+ +M   NC P+
Sbjct: 393 FAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPN 452

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            +TF T ++G   + K    + +L++M  +     +++  ++V+D L   K+ RE L
Sbjct: 453 TITFNTFIKGLCCSGKTEWAMKVLNQM-RQYGCAPNVTTYNEVLDGLFNAKRTREAL 508



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 184/356 (51%), Gaps = 6/356 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + +FT L+       +    + L+ R+   G  P+    N LI+ LC  G    A  
Sbjct: 310 SPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVS 369

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           V  ++ R+   PN  T++ LI+G    G ++ A+ ++ K+    C PNVV +  +++ LC
Sbjct: 370 VSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLC 429

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R      AL L E M N     C P+ +T+N+ I GLC  G  + A ++L QM+     P
Sbjct: 430 RNSMFNHALHLIENMAN---GNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAP 486

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV TYN ++ G       +EA  +  E+ +  ++ ++VT+N +++  C  G      ++ 
Sbjct: 487 NVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIA 546

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH-DVYSYNILINANCK 376
             ++  G  PD++TYN+++  +C  G +  A +L   +  KG  + DV++Y  L+   C 
Sbjct: 547 GKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCN 606

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF-QVGNLGDALKLIDKMQLNDVV 431
              V++AV    +M++E I P+  T+N L+ GLF ++G+LG  + ++D +  N  V
Sbjct: 607 WIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLG-PIHIVDNILANGKV 661



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 138/280 (49%), Gaps = 10/280 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV     M +    P  T+++ L+   AK         ++ ++ +NG  P++ V   ++
Sbjct: 366 EAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMV 425

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC+  + + A  ++  +      PNT+TFN  I GLC  G+   A ++  ++  + C 
Sbjct: 426 DVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCA 485

Query: 184 PNVVTFNTLINGLC---RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
           PNV T+N +++GL    RTR  L  +   EEM        K ++VTYN+I+ G C  G  
Sbjct: 486 PNVTTYNEVLDGLFNAKRTREALQIVGEIEEME------IKSNLVTYNTILSGFCHAGMF 539

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV-QPDVVTFNA 299
             A ++  ++      P+ ITYN++I  +C   + K A  L   +   G   PDV T+ +
Sbjct: 540 KGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTS 599

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
           ++   C    +D+    L+ MI  G+ P+  T+N+L+ G 
Sbjct: 600 LLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 2/207 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N A++  + M      P   +F   +  L  + + +  + +  ++   G  P++   N +
Sbjct: 435 NHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEV 494

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ L     T  A  ++G I       N VT+N +++G C  G    A ++  KL V   
Sbjct: 495 LDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGT 554

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ +T+NT+I   C+      A++L + +  +      PDV TY S++ G+C    VD+
Sbjct: 555 KPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGY--PDVFTYTSLLWGVCNWIGVDE 612

Query: 243 AKELLLQMKDRNINPNVITYNSLICGF 269
           A   L +M +  I PN  T+N+L+ G 
Sbjct: 613 AVVHLDKMINEGICPNRATWNALVRGL 639


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/475 (30%), Positives = 241/475 (50%), Gaps = 45/475 (9%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-----CDPNVVTFNTLINGLCRTRNTL 203
           P+  ++N L+NGLC E R  EA  L   L++ A     C P+VV+++T+ING  +  +  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALEL---LHIMADDGGDCPPDVVSYSTVINGFFKEGD-- 103

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
                 ++M+++      P+VVTYNSII  LCK   VDKA E+L  M    + P+ +TYN
Sbjct: 104 -----LDKMLDQR---ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYN 155

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S++ GFC     KEA     +M  +GV+PDVVT+N++++Y CK+G+  +  ++ + M +R
Sbjct: 156 SIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR 215

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD  TY +L+ G+   G +     L   MV  G   + Y ++IL+ A  K +KVE+A
Sbjct: 216 GLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEA 275

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + ++ +M  + + P+ +TY T++  L + G + DA+   ++M    + PDS  + + I  
Sbjct: 276 MLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHS 335

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC      +A ++F  + +    L    +N +I+  CK GR+  + KLF  +   G  PD
Sbjct: 336 LCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395

Query: 504 VVTCST-------------------------MIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           ++T                            M   +  +G +++ + L L ME   C   
Sbjct: 396 IITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 455

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
                 ++R  +Q  + ++    L  M  EK    + S +S  +DLLS   KY+E
Sbjct: 456 SGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSG-GKYQE 508



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 213/436 (48%), Gaps = 20/436 (4%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S++ ++    K    D ++   +R++     P++   N +I  LCK      A  V
Sbjct: 86  PDVVSYSTVINGFFKEGDLDKMLD--QRIS-----PNVVTYNSIIAALCKAQTVDKAMEV 138

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +++S   P+ +T+N +++G C+ G+  EA    KK+     +P+VVT+N+L++ LC+
Sbjct: 139 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 198

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A K+F+ M        KPD+ TY +++ G    G + +   LL  M    I+PN
Sbjct: 199 NGRCTEARKIFDSMTKRG---LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 255

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              ++ L+C +   +  +EA  +F +M   G+ P+ VT+  +I+  CK G+++      E
Sbjct: 256 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFE 315

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            MI  G+ PD++ YNSL+   C+  +  +A ELF+ M+ +G       +N +I+++CK+ 
Sbjct: 316 QMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEG 375

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +V ++  L+  M+   ++P +IT          +G   +A  L      N +VP+ +T+ 
Sbjct: 376 RVIESGKLFDLMVRIGVKPDIIT----------LGRNDEAKDLFVAFSSNGLVPNYWTYR 425

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
              + +   G + E  Q+F ++ +  C +     N ++  L + G +  A      +  K
Sbjct: 426 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 485

Query: 499 GPIPDVVTCSTMIHWL 514
               +  T S  I  L
Sbjct: 486 HFSLEASTASLFIDLL 501



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 190/418 (45%), Gaps = 56/418 (13%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  +N   K G++         D M+  + SP + ++  ++  L K +  D  + 
Sbjct: 87  DVVSYSTVINGFFKEGDL---------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAME 137

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  +G+ PD    N +++  C  G    A V L ++      P+ VT+N L++ LC
Sbjct: 138 VLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC 197

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF------------- 209
             GR  EA ++F  +      P++ T+ TL+ G   T+  LV +                
Sbjct: 198 KNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNH 256

Query: 210 ------------EEMVNEFGAI--------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
                       +E V E   +          P+ VTY ++ID LCK G V+ A     Q
Sbjct: 257 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQ 316

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           M D  + P+ I YNSLI   C  D W++A+ LF+EM+D G+    + FN++I+ +CK+G+
Sbjct: 317 MIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +  +L +LM++ GV PD +T          +GR   A++LFV+  S G   + ++Y +
Sbjct: 377 VIESGKLFDLMVRIGVKPDIIT----------LGRNDEAKDLFVAFSSNGLVPNYWTYRL 426

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL---GDALKLIDK 424
           +         +E+   L+  M            N ++  L Q G +   G  L +ID+
Sbjct: 427 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 484



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 149/297 (50%), Gaps = 10/297 (3%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN--PDTVTYN 333
           ++A+ +F E++  G+ PDV ++N ++N  C + +  +   LL +M   G +  PD V+Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           ++++GF   G + +       M+ +    +V +YN +I A CK Q V+ A+ +   M+  
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            + P  +TYN+++ G    G   +A+  + KM+ + V PD  T+ + +D LCKNG   EA
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
            ++F ++     +  I TY  L+ G    G L     L   +   G  P+    S ++  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             K+ ++++A  +   M  +   P+ VT+ T++    ++ +    ++   +M  E L
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/428 (32%), Positives = 219/428 (51%), Gaps = 4/428 (0%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R+   P    F+ L + L   G + EA + F K+  F   P   + N L++   +   T 
Sbjct: 18  RNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 77

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
              + F++M+   GA  KP V TYN +ID +CK+G V+ A+ L  +MK R + P+ +TYN
Sbjct: 78  GVKRFFKDMI---GAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYN 134

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S+I GF  V    +  C F EM D   +PDV+T+NA+IN  CK GK+ K       M + 
Sbjct: 135 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRN 194

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P+ V+Y++L+D FC  G + +A + +V M   G   + Y+Y  LI+A CK   + DA
Sbjct: 195 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDA 254

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EML   +  +V+TY  L+ GL    N  + L L+D+M   D+     TF   IDG
Sbjct: 255 FRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDG 314

Query: 444 LCKNGFVLEAVQVFQAIRN-CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           LCKN  V +A+  F  I N    +     Y  +I+GLCK  +++ A  LF ++  KG +P
Sbjct: 315 LCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVP 374

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D    ++++    K+G + +A  L   M         + + +L+ G    N+  K    L
Sbjct: 375 DRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFL 434

Query: 563 HKMAAEKL 570
            +M  E +
Sbjct: 435 EEMIGEGI 442



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 222/449 (49%), Gaps = 4/449 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG   F  L ++L      +  +  F ++    +FP     N L++   K+G T G    
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              ++ +   P   T+N +I+ +C EG +  A  LF+++      P+ VT+N++I+G  +
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                  +  FEEM +     C+PDV+TYN++I+  CK G + K  E   +MK   + PN
Sbjct: 143 VGRLDDTVCFFEEMKD---MCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPN 199

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V++Y++L+  FC     ++A   +++M   G+ P+  T+ ++I+  CK G +    RL  
Sbjct: 200 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLAN 259

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+Q GV  + VTY +L+DG C     +    L   MV    +  V ++ +LI+  CK++
Sbjct: 260 EMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNK 319

Query: 379 KVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            V  A+  +  + ++  ++ +   Y  ++ GL +   +  A  L ++M    +VPD   +
Sbjct: 320 LVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAY 379

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            + +DG  K G VLEA+ +   +     +L +  Y  L+ GL    +L+ A      +  
Sbjct: 380 TSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 439

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           +G  PD V C +++    + G +++A +L
Sbjct: 440 EGIHPDEVLCISVLKKHYELGCINEAVEL 468



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 196/383 (51%), Gaps = 4/383 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+  F  M + +  P   S   LL   AK  + D V   FK +   G  P +F  N++
Sbjct: 42  EEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIM 101

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+C+CK G    A  +   +      P+TVT+N +I+G    GR+ +    F+++    C
Sbjct: 102 IDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 161

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+V+T+N LIN  C+       L+ F EM        KP+VV+Y++++D  CK+G + +
Sbjct: 162 EPDVITYNALINCFCKFGKLPKGLEFFREMKRNG---LKPNVVSYSTLVDAFCKEGMMQQ 218

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +  + M+   + PN  TY SLI  +C + +  +A  L  EM+  GV+ +VVT+ A+I+
Sbjct: 219 AIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALID 278

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-GCR 361
             C      +   LL+ M++  +    VT+  L+DG C    +S+A + F  + +  G +
Sbjct: 279 GLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQ 338

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +   Y  +I+  CK  +VE A  L+ +M  + + P    Y +L+ G F+ GN+ +AL L
Sbjct: 339 ANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 398

Query: 422 IDKMQLNDVVPDSFTFATYIDGL 444
            DKM    +  D   + + + GL
Sbjct: 399 RDKMVETGMKLDLLAYTSLVWGL 421



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 188/408 (46%), Gaps = 12/408 (2%)

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKD 237
           C P    F+ L +        L+ L + EE +  F  + +    P   + N ++    K 
Sbjct: 21  CVPGFGVFDALFS-------VLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKL 73

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G  D  K     M      P V TYN +I   C   D + A+ LF EM   G+ PD VT+
Sbjct: 74  GKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTY 133

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N+MI+   K G++D      E M      PD +TYN+L++ FC  G++ +  E F  M  
Sbjct: 134 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKR 193

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            G + +V SY+ L++A CK+  ++ A+  Y +M    + P+  TY +L+    ++GNL D
Sbjct: 194 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSD 253

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A +L ++M    V  +  T+   IDGLC      E + +   +     ++ + T+  LI+
Sbjct: 254 AFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLID 313

Query: 478 GLCKMGRLKTACKLFHRLQHK-GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           GLCK   +  A   F R+ +  G   +    + MI  LCK  Q++ A  L   M  K  V
Sbjct: 314 GLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLV 373

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           P    + +L+ G  +     + + L  KM    + +  L+ +S V  L
Sbjct: 374 PDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGL 421



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 190/404 (47%), Gaps = 5/404 (1%)

Query: 55  HKSGNITSNEAV-YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
           HK   +   + V  FF  MI     P + ++ I++  + K    +    LF+ +   GL 
Sbjct: 68  HKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLI 127

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD    N +I+   K+G           +   C  P+ +T+N LIN  C  G++ +    
Sbjct: 128 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEF 187

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           F+++      PNVV+++TL++  C+      A+K + +M    G +  P+  TY S+ID 
Sbjct: 188 FREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM-RRVGLV--PNEYTYTSLIDA 244

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            CK G +  A  L  +M    +  NV+TY +LI G C  ++  E   L  EM++  ++  
Sbjct: 245 YCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVT 304

Query: 294 VVTFNAMINYNCKDGKMDK-VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           VVTF  +I+  CK+  + K ++    +    G+  +   Y +++DG C   ++  A  LF
Sbjct: 305 VVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLF 364

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M  KG   D  +Y  L++ N K   V +A+ L  +M+   ++  ++ Y +L+ GL   
Sbjct: 365 EQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHC 424

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
             L  A   +++M    + PD     + +    + G + EAV++
Sbjct: 425 NQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVEL 468



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 157/326 (48%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           +EA   F +M    V P   + N +++   K GK D V R  + MI  G  P   TYN +
Sbjct: 42  EEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIM 101

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +D  C  G +  AR LF  M  +G   D  +YN +I+   K  +++D VC + EM     
Sbjct: 102 IDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 161

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P VITYN L++   + G L   L+   +M+ N + P+  +++T +D  CK G + +A++
Sbjct: 162 EPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIK 221

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
            +  +R         TY  LI+  CK+G L  A +L + +   G   +VVT + +I  LC
Sbjct: 222 FYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLC 281

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
                 +   LL +M   +   + VTFC L+ G  +N   SK +    +++ +  + ++ 
Sbjct: 282 GWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANA 341

Query: 576 SLSSKVVDLLSKDKKYRECLNQFRHL 601
           ++ + ++D L K  +       F  +
Sbjct: 342 AIYTAMIDGLCKGNQVEAATTLFEQM 367


>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 532

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 220/416 (52%), Gaps = 7/416 (1%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           +++ +L+  L +   +D V  +   + S+G   D  VL  L+    + G    A  ++  
Sbjct: 94  STYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIE 153

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +       ++  +N+L+N L   G++ EA  LFK+   F   PN  TFN LI GLCR   
Sbjct: 154 VQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGE 213

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-INPNVI 260
                +LF  M   FG  C PDVVTYN++I GLCK   +D+A +LL +++ RN  +P+V+
Sbjct: 214 VEKGFELFNAM-QSFG--CLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVM 270

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY S+I GF  +   + A  LF EM+ +G++P VVTFN +I+   K G M     + E M
Sbjct: 271 TYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKM 330

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
                 PD VT+ SL+DG+C  G I    +++  M ++    ++Y+Y+++INA CKD ++
Sbjct: 331 ASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRI 390

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
            +A  L R++    + P    YN ++ G  + GN+ +A  ++ +M+     PD  TF   
Sbjct: 391 HEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTIL 450

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           I G C  G ++EA+ +F+ +    C     T + L+  L K G+   A   FH +Q
Sbjct: 451 IIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEA---FHIVQ 503



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 202/405 (49%), Gaps = 4/405 (0%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
            LLI  LC+MG+     +V+G +       ++    FL+      G+   A +L  ++  
Sbjct: 97  ELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQG 156

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
                +   +N L+N L +      A+ LF+E          P+  T+N +I GLC+ G 
Sbjct: 157 EEARISSFVYNYLLNELVKGGKVHEAIFLFKE---NLAFHSPPNTWTFNILIRGLCRVGE 213

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-NGVQPDVVTFN 298
           V+K  EL   M+     P+V+TYN+LI G C  ++   A  L  E+   N   PDV+T+ 
Sbjct: 214 VEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYT 273

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++I+   K GK++  + L E MI+ G+ P  VT+N L+DGF  +G +  A  +   M S 
Sbjct: 274 SIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASY 333

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
            C  DV ++  LI+  C+   +   + ++  M +  + P++ TY+ +++ L +   + +A
Sbjct: 334 SCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEA 393

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L+ +++ +DV P  F +   IDG CK G V EA  +   +   +C     T+  LI G
Sbjct: 394 RDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIG 453

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
            C  GR+  A  +F ++   G  PD +T S+++  L K G+  +A
Sbjct: 454 HCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEA 498



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 208/430 (48%), Gaps = 19/430 (4%)

Query: 166 RIMEAARL-FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF----GAIC 220
           + ME  RL F  ++ F+      T+  LI  LC+     + L    EMV  +    G + 
Sbjct: 78  KFMEFCRLNFSLIHCFS------TYELLIRSLCQ-----MGLHDLVEMVIGYMRSDGHLI 126

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
              V+ +  ++    + G  D AK+L+++++      +   YN L+          EA  
Sbjct: 127 DSRVLGF--LVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIF 184

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF E +     P+  TFN +I   C+ G+++K   L   M   G  PD VTYN+L+ G C
Sbjct: 185 LFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLC 244

Query: 341 LVGRISRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
               + RA +L   + S+  C  DV +Y  +I+   K  K+E A  L+ EM+   I P+V
Sbjct: 245 KANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTV 304

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +T+N L+ G  ++GN+  A  + +KM     +PD  TF + IDG C+ G +   ++V+  
Sbjct: 305 VTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDV 364

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           ++       I TY+ +IN LCK  R+  A  L  +L+     P     + +I   CK G 
Sbjct: 365 MKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGN 424

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +D+AN ++ +ME K C P +VTF  L+ G     +  + + +  KM A      ++++SS
Sbjct: 425 VDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISS 484

Query: 580 KVVDLLSKDK 589
            V  LL   K
Sbjct: 485 LVACLLKAGK 494



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 225/455 (49%), Gaps = 16/455 (3%)

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG--RIMEAARLFKKLNVFACDPN 185
           ++G+    F  L   L  CF+    T+  LI  LC  G   ++E    + + +    D  
Sbjct: 74  QVGLKFMEFCRLNFSLIHCFS----TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSR 129

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           V+ F  L+    +     +A KL  E+  E   I       YN +++ L K G V +A  
Sbjct: 130 VLGF--LVTSFAQAGKFDLAKKLIIEVQGEEARISS---FVYNYLLNELVKGGKVHEAIF 184

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           L  +    +  PN  T+N LI G C V + ++   LF  M   G  PDVVT+N +I+  C
Sbjct: 185 LFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLC 244

Query: 306 KDGKMDKVNRLL-ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           K  ++D+   LL E+  +   +PD +TY S++ GF  +G++  A  LF  M+  G    V
Sbjct: 245 KANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTV 304

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            ++N+LI+   K   +  A  ++ +M S    P V+T+ +L+ G  + G++   LK+ D 
Sbjct: 305 VTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDV 364

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+  +V P+ +T++  I+ LCK+  + EA  + + ++      +   YN +I+G CK G 
Sbjct: 365 MKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGN 424

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +  A  +   ++ K   PD VT + +I   C +G+M +A D+   M A  C P  +T  +
Sbjct: 425 VDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISS 484

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           L+   ++  K S+   ++ + A+E L   +LS SS
Sbjct: 485 LVACLLKAGKPSEAFHIV-QTASEDL---NLSFSS 515



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 175/335 (52%), Gaps = 6/335 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            LN+  K G +  +EA++ F   +     P   +F IL+  L +  + +    LF  + S
Sbjct: 169 LLNELVKGGKV--HEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQS 226

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIM 168
            G  PD+   N LI+ LCK      A  +L  +  R+  +P+ +T+  +I+G    G++ 
Sbjct: 227 FGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLE 286

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
            A+ LF+++     +P VVTFN LI+G  +  N + A  + E+M +     C PDVVT+ 
Sbjct: 287 AASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMAS---YSCIPDVVTFT 343

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           S+IDG C+ G +    ++   MK RN++PN+ TY+ +I   C  +   EA+ L  ++  +
Sbjct: 344 SLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCS 403

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
            V P    +N +I+  CK G +D+ N ++  M ++   PD VT+  L+ G C+ GR+  A
Sbjct: 404 DVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEA 463

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            ++F  M++ GC  D  + + L+    K  K  +A
Sbjct: 464 LDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEA 498



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 9/244 (3%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP + ++T +++   K  + +    LF+ +  +G+ P +   N+LI+   K+G    A  
Sbjct: 266 SPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEA 325

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +  ++      P+ VTF  LI+G C  G I    +++  +      PN+ T++ +IN LC
Sbjct: 326 MHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALC 385

Query: 198 RTRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           +      A  L  ++       C    P    YN +IDG CK G VD+A  ++ +M+++ 
Sbjct: 386 KDNRIHEARDLLRQLK------CSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKR 439

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             P+ +T+  LI G C      EA  +F +M+  G  PD +T ++++    K GK  +  
Sbjct: 440 CRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAF 499

Query: 315 RLLE 318
            +++
Sbjct: 500 HIVQ 503


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 247/499 (49%), Gaps = 15/499 (3%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L  RL   G+ P     N +   LC++ +         ++ +     NT ++N L+  LC
Sbjct: 213 LLLRLRQYGISPSPESCNAV---LCRLPLDEAV-----QLFQELPEKNTCSYNILLKALC 264

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GRI +A +LF ++   A  P+VVT+  +++G C       A+KL  EM    G    P
Sbjct: 265 TAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR-GLELNP 320

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
             V Y S+I  LC +G V  A  ++  M    +  +   + +++ GFC   D   A+  F
Sbjct: 321 --VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM   G+  D VT+ A+IN  C+ G++ +  R+L+ M  +G++ D VTY  L+DG+C V
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G+++ A  +   MV K    +V +Y  L +  CK   V  A  L  EM S+ +  ++ TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N+L++GL + GNL  A++ +  M    + PD +T+ T I  LC++  +  A  + Q + +
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              +  I TYN L+NG C  GR++   +L   +  K   P+  T ++++   C E  M  
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
             ++   M ++  VP+E T+  L++G  +  +  K  +  H    EK      S  + ++
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCK-ARNMKEALYFHSEMIEKGFRLTASSYNALI 677

Query: 583 DLLSKDKKYRECLNQFRHL 601
            LL+K KK+ E    F  +
Sbjct: 678 RLLNKKKKFTEARRLFEKM 696



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 194/361 (53%), Gaps = 7/361 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           FT +++   +        + F  +   GL  D      LIN LC+ G    A  VL  + 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                 + VT+  LI+G C  G++ EA  +  K+      PNVVT+  L +GLC+  +  
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A +L  EM ++   +   ++ TYNS+I+GLCK G +++A   ++ M +  + P+V TY 
Sbjct: 478 AANELLHEMCSKGLEL---NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           ++I   C   +   A  L  EM+D G++P +VT+N ++N  C  G+++   RLLE M+++
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            ++P+T TYNSLM  +C+   +    E++  M+S+    +  +YNILI  +CK + +++A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV--PDSFTFATYI 441
           +  + EM+ +  R +  +YN L+  L +     +A +L +KM+ + +   PD + F  YI
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNF--YI 712

Query: 442 D 442
           D
Sbjct: 713 D 713



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 209/409 (51%), Gaps = 21/409 (5%)

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
            F+ + V+F+ L+  LC     + +A L  +L  +   P+  + N +   LCR       
Sbjct: 193 AFSSDPVSFDLLL--LC-----LPSAPLLLRLRQYGISPSPESCNAV---LCRLP----- 237

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
               +E V  F  + + +  +YN ++  LC  G +  A +L  +M      P+V+TY  +
Sbjct: 238 ---LDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIM 291

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + G+C + + + A  L  EM   G++ + V + ++I   C +G++    R++E M+  GV
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             D   + ++M GFC  G ++ AR  F  M  +G   D  +Y  LIN  C+  ++++A  
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           + +EM  + +    +TY  L+ G  +VG + +A  + +KM    V P+  T+    DGLC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G V  A ++   + +   EL I TYN LINGLCK G L+ A +    +   G  PDV 
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVY 531

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           T +T+I  LC+  ++D+A+ LL +M  K   P+ VT+  L+ GF  + +
Sbjct: 532 TYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 237/511 (46%), Gaps = 45/511 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F  +    P     S+ ILL  L    +      LF  + S    PD+    ++
Sbjct: 239 DEAVQLFQEL----PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIM 291

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C +     A  +L  +       N V +  +I  LC EG++ +A R+ + + +   
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +   F T+++G CR  +   A   F+EM     A    D VTY ++I+GLC+ G + +
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA---DGVTYTALINGLCRAGELKE 408

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ +L +M+D+ ++ + +TY  LI G+C V    EA  +  +M+   V P+VVT+ A+ +
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G +   N LL  M  +G+  +  TYNSL++G C  G + +A    + M   G + 
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DVY+Y  +I A C+ ++++ A  L +EML + I+P+++TYN L++G    G +    +L+
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M   ++ P++                                    TYN L+   C  
Sbjct: 589 EWMLEKNIHPNT-----------------------------------TTYNSLMKQYCIE 613

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             +K+  +++  +  +  +P+  T + +I   CK   M +A     +M  K    +  ++
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
             L+R   +  K ++   L  KM  ++L   
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKDRLTAE 704



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 180/358 (50%), Gaps = 3/358 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           +FD M K   +    ++T L+  L +  +      + + +   GL  D     +LI+  C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K+G  + AF+V  ++++   TPN VT+  L +GLC +G +  A  L  ++     + N+ 
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+N+LINGLC+  N   A++   +M +E G   KPDV TY +II  LC+   +D+A  LL
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDM-DEAG--LKPDVYTYTTIIGALCQSKELDRAHSLL 553

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M D+ I P ++TYN L+ GFC     +  K L   M++  + P+  T+N+++   C +
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             M     + + M+ + V P+  TYN L+ G C    +  A      M+ KG R    SY
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           N LI    K +K  +A  L+ +M  +R+      YN  +   F   NL   L L D++
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 5/282 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +T  EA    + M++ + +P + ++T L   L K         L   + S GL  +
Sbjct: 437 KVGKMT--EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F  N LIN LCK G    A   +  +  +   P+  T+  +I  LC    +  A  L +
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P +VT+N L+NG C +       +L E M+ +      P+  TYNS++   C
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN---IHPNTTTYNSLMKQYC 611

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            +  +    E+   M  + + PN  TYN LI G C   + KEA     EM++ G +    
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           ++NA+I    K  K  +  RL E M +  +  +   YN  +D
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYID 713


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 247/499 (49%), Gaps = 15/499 (3%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L  RL   G+ P     N +   LC++ +         ++ +     NT ++N L+  LC
Sbjct: 213 LLLRLRQYGISPSPESCNAV---LCRLPLDEAV-----QLFQELPEKNTCSYNILLKALC 264

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GRI +A +LF ++   A  P+VVT+  +++G C       A+KL  EM    G    P
Sbjct: 265 TAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR-GLELNP 320

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
             V Y S+I  LC +G V  A  ++  M    +  +   + +++ GFC   D   A+  F
Sbjct: 321 --VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM   G+  D VT+ A+IN  C+ G++ +  R+L+ M  +G++ D VTY  L+DG+C V
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G+++ A  +   MV K    +V +Y  L +  CK   V  A  L  EM S+ +  ++ TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           N+L++GL + GNL  A++ +  M    + PD +T+ T I  LC++  +  A  + Q + +
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
              +  I TYN L+NG C  GR++   +L   +  K   P+  T ++++   C E  M  
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
             ++   M ++  VP+E T+  L++G  +  +  K  +  H    EK      S  + ++
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCK-ARNMKEALYFHSEMIEKGFRLTASSYNALI 677

Query: 583 DLLSKDKKYRECLNQFRHL 601
            LL+K KK+ E    F  +
Sbjct: 678 RLLNKKKKFTEARRLFEKM 696



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 193/361 (53%), Gaps = 7/361 (1%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           FT +++   +        + F  +   GL  D      LIN LC+ G    A  VL  + 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                 + VT+  LI+G C  G++ EA  +  K+      PNVVT+  L +GLC+  +  
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A +L  EM ++   +   ++ TYNS+I+GLCK G +++A   ++ M +  + P+V TY 
Sbjct: 478 AANELLHEMCSKGLEL---NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           ++I   C   +   A  L  EM+D G++P +VT+N ++N  C  G+++   RLLE M+++
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            ++P+T TYNSLM  +C+   +    E++  M+S+    +  +YNILI  +CK + +++A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV--PDSFTFATYI 441
           +  + EM+ +  R +  +YN L+  L +     +A +L +KM+   +   PD + F  YI
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF--YI 712

Query: 442 D 442
           D
Sbjct: 713 D 713



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 209/409 (51%), Gaps = 21/409 (5%)

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
            F+ + V+F+ L+  LC     + +A L  +L  +   P+  + N +   LCR       
Sbjct: 193 AFSSDPVSFDLLL--LC-----LPSAPLLLRLRQYGISPSPESCNAV---LCRLP----- 237

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
               +E V  F  + + +  +YN ++  LC  G +  A +L  +M      P+V+TY  +
Sbjct: 238 ---LDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIM 291

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           + G+C + + + A  L  EM   G++ + V + ++I   C +G++    R++E M+  GV
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             D   + ++M GFC  G ++ AR  F  M  +G   D  +Y  LIN  C+  ++++A  
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           + +EM  + +    +TY  L+ G  +VG + +A  + +KM    V P+  T+    DGLC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G V  A ++   + +   EL I TYN LINGLCK G L+ A +    +   G  PDV 
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVY 531

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           T +T+I  LC+  ++D+A+ LL +M  K   P+ VT+  L+ GF  + +
Sbjct: 532 TYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 237/511 (46%), Gaps = 45/511 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  F  +    P     S+ ILL  L    +      LF  + S    PD+    ++
Sbjct: 239 DEAVQLFQEL----PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIM 291

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C +     A  +L  +       N V +  +I  LC EG++ +A R+ + + +   
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +   F T+++G CR  +   A   F+EM     A    D VTY ++I+GLC+ G + +
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA---DGVTYTALINGLCRAGELKE 408

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ +L +M+D+ ++ + +TY  LI G+C V    EA  +  +M+   V P+VVT+ A+ +
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G +   N LL  M  +G+  +  TYNSL++G C  G + +A    + M   G + 
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DVY+Y  +I A C+ ++++ A  L +EML + I+P+++TYN L++G    G +    +L+
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M   ++ P++                                    TYN L+   C  
Sbjct: 589 EWMLEKNIHPNT-----------------------------------TTYNSLMKQYCIE 613

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             +K+  +++  +  +  +P+  T + +I   CK   M +A     +M  K    +  ++
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
             L+R   +  K ++   L  KM  E+L   
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAE 704



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 180/358 (50%), Gaps = 3/358 (0%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           +FD M K   +    ++T L+  L +  +      + + +   GL  D     +LI+  C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K+G  + AF+V  ++++   TPN VT+  L +GLC +G +  A  L  ++     + N+ 
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T+N+LINGLC+  N   A++   +M +E G   KPDV TY +II  LC+   +D+A  LL
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDM-DEAG--LKPDVYTYTTIIGALCQSKELDRAHSLL 553

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M D+ I P ++TYN L+ GFC     +  K L   M++  + P+  T+N+++   C +
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             M     + + M+ + V P+  TYN L+ G C    +  A      M+ KG R    SY
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           N LI    K +K  +A  L+ +M  ER+      YN  +   F   NL   L L D++
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 5/282 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G +T  EA    + M++ + +P + ++T L   L K         L   + S GL  +
Sbjct: 437 KVGKMT--EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F  N LIN LCK G    A   +  +  +   P+  T+  +I  LC    +  A  L +
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P +VT+N L+NG C +       +L E M+ +      P+  TYNS++   C
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN---IHPNTTTYNSLMKQYC 611

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
            +  +    E+   M  + + PN  TYN LI G C   + KEA     EM++ G +    
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           ++NA+I    K  K  +  RL E M +  +  +   YN  +D
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 262/545 (48%), Gaps = 35/545 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + A  +N   K G I  +EAV  F  M +    P + ++  L+  L K+ + +  + 
Sbjct: 240 DVYTYATAINAYCKGGKI--DEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALM 297

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
              R+  N + P L    +L+N L K      A  VL  +    F+PN   FN LI+G  
Sbjct: 298 FKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYS 357

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM------VNE- 215
            +G + +A R+   + +    PN VT NTL+ G CRT     A ++ E +      VNE 
Sbjct: 358 RKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNED 417

Query: 216 -----FGAICKP----------------DVVTYNSIID----GLCKDGFVDKAKELLLQM 250
                   +CK                 ++   +S++     GLCK G   +A +L  ++
Sbjct: 418 ACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRL 477

Query: 251 KDR-NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
            D+  +  N  T N+L+ G C   + +E   +  EM++ G+  D +++N +I   CK GK
Sbjct: 478 ADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGK 537

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +++  +L E M+++G  PDT TYN LM G    G++     +       G   ++Y+Y +
Sbjct: 538 IEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYAL 597

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           ++   C   ++++AV L+ +++  ++  S + YN L++   + GN  +A KL D M+ ++
Sbjct: 598 MLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSN 657

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
           + P  FT+++ I G+C N  V EA  +F+ +RN      +  Y  LI G CK+G++    
Sbjct: 658 IHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIE 717

Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +   +      P+ +T + MI   CK G   +A  LL +M A    P  VT+  L +G+
Sbjct: 718 SILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGY 777

Query: 550 VQNNK 554
            + N+
Sbjct: 778 CKENE 782



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 230/464 (49%), Gaps = 17/464 (3%)

Query: 119 LNLLINCLCKMGITSG---AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           L+LLI  LC      G   AF            P+  + NFL++ L     + ++ R+F 
Sbjct: 171 LDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFD 230

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +       +V T+ T IN  C+      A+ LF +M  E G +  P+VVTYN++IDGLC
Sbjct: 231 AMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKM-GEGGVL--PNVVTYNNLIDGLC 287

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G +++A     +M +  +NP+++TY  L+ G    + + EA  + +EM   G  P+  
Sbjct: 288 KSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEF 347

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            FNA+I+   + G MD   R+ + M  +G+ P+ VT+N+L+ GFC   ++ +A ++   +
Sbjct: 348 VFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYL 407

Query: 356 VSK--GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
           +S       D  SY  +++  CK  K + A+ + + +L   I+ +      L+ GL + G
Sbjct: 408 LSNVLSVNEDACSY--VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCG 465

Query: 414 NLGDAL----KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
              +A+    +L DK  L     ++ T    + GLC+ G + E   V + +      L  
Sbjct: 466 KHLEAIDLWFRLADKKGL---AANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDG 522

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            +YN LI G CK G+++ A KL  ++  +G  PD  T + ++  L  +G+MD    +L +
Sbjct: 523 ISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHE 582

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
            +    VP+  T+  +L G+   ++    V L +K+   K+ +S
Sbjct: 583 AKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELS 626



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/571 (24%), Positives = 247/571 (43%), Gaps = 111/571 (19%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
           F    S G+FP L   N L++ L K      +F V   + R     +  T+   IN  C 
Sbjct: 194 FMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCK 253

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
            G+I EA  LF K+      PNVVT+N LI+GLC++     AL     MV        P 
Sbjct: 254 GGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVEN---KVNPS 310

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           +VTY  +++GL K    D+A  +L++M  +  +PN   +N+LI G+    +  +A  +  
Sbjct: 311 LVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRD 370

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR--GVNPDTVTY--------- 332
           +M   G++P+ VT N ++   C+  +M++  ++LE ++     VN D  +Y         
Sbjct: 371 DMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSS 430

Query: 333 --------------------NSLMD----GFCLVGRISRARELFVSMV-SKGCRHDVYSY 367
                               +SL+     G C  G+   A +L+  +   KG   +  + 
Sbjct: 431 KFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTS 490

Query: 368 NILINANC-----------------------------------KDQKVEDAVCLYREMLS 392
           N L+   C                                   K  K+E+A  L  +M+ 
Sbjct: 491 NALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMK 550

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC------- 445
           +  +P   TYN L+ GL   G + D  +++ + + + VVP+ +T+A  ++G C       
Sbjct: 551 QGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDN 610

Query: 446 ----------------------------KNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
                                       K G   EA ++  A+R+      I TY+ +I+
Sbjct: 611 AVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIH 670

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV- 536
           G+C    ++ A  +F  ++++G +P+V   + +I   CK GQMD+   +L +M + NC+ 
Sbjct: 671 GMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTS-NCIQ 729

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           P+++T+  ++ G+ +     +   LL++M A
Sbjct: 730 PNKITYTIMIDGYCKMGNTKEATKLLNEMIA 760



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 231/496 (46%), Gaps = 8/496 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S   L++ L K+ +      +F  +   G+  D++     IN  CK G    A  +
Sbjct: 204 PSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGL 263

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++      PN VT+N LI+GLC  GR+ EA     ++     +P++VT+  L+NGL +
Sbjct: 264 FLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVK 323

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  +  EM   +     P+   +N++IDG  + G +D A  +   M  + + PN
Sbjct: 324 FEKFDEANSVLVEM---YSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPN 380

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDN--GVQPDVVTFNAMINYNCKDGKMDKVNRL 316
            +T+N+L+ GFC  +  ++A+ +   ++ N   V  D  ++  +++  CK  K D   ++
Sbjct: 381 AVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY--VLHLLCKSSKFDSALKI 438

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-GCRHDVYSYNILINANC 375
           ++ ++ R +  +      L+ G C  G+   A +L+  +  K G   +  + N L+   C
Sbjct: 439 VKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLC 498

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           +   +E+   + +EM+   +    I+YNTL+ G  + G + +A KL +KM      PD++
Sbjct: 499 ERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTY 558

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+   + GL   G + +  +V    ++      I TY  ++ G C   R+  A  LF++L
Sbjct: 559 TYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKL 618

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
            +       V  + +I    K G   +A  L   M + N  P+  T+ +++ G   N+  
Sbjct: 619 VYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLV 678

Query: 556 SKVVVLLHKMAAEKLV 571
            +   +  +M  E L+
Sbjct: 679 EEAKGIFEEMRNEGLM 694



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 149/301 (49%)

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           F+     GV P + + N +++   K  ++ K  R+ + M + GV  D  TY + ++ +C 
Sbjct: 194 FMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCK 253

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G+I  A  LF+ M   G   +V +YN LI+  CK  ++E+A+     M+  ++ PS++T
Sbjct: 254 GGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVT 313

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y  L++GL +     +A  ++ +M      P+ F F   IDG  + G + +A++V   + 
Sbjct: 314 YGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMT 373

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +    T+N L+ G C+  +++ A ++   L       +   CS ++H LCK  + D
Sbjct: 374 LKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFD 433

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A  ++  +  +N   ++     L+ G  +  K  + + L  ++A +K + ++ + S+ +
Sbjct: 434 SALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNAL 493

Query: 582 V 582
           +
Sbjct: 494 L 494



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 5/133 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F+ M      P +  +T L+    K  Q D + S+ + + SN + P+     ++I
Sbjct: 680 EAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMI 739

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CKMG T  A  +L  ++ +  +P+TVT+  L  G C E  + E  +        A  
Sbjct: 740 DGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQ-----GDTAVP 794

Query: 184 PNVVTFNTLINGL 196
              +T+ TL++ L
Sbjct: 795 LEEITYTTLVDKL 807



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 10/139 (7%)

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           VF ++++C         N L++ L K   L  + ++F  +   G + DV T +T I+  C
Sbjct: 202 VFPSLKSC---------NFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYC 252

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           K G++D+A  L L M     +P+ VT+  L+ G  ++ +  + ++   +M   K V   L
Sbjct: 253 KGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENK-VNPSL 311

Query: 576 SLSSKVVDLLSKDKKYREC 594
                +V+ L K +K+ E 
Sbjct: 312 VTYGILVNGLVKFEKFDEA 330


>gi|356561399|ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 422

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/380 (36%), Positives = 213/380 (56%), Gaps = 7/380 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++AV  F+ M+ M+ +P +  F  +L    K K Y   +SL K++   G+ P+L  LN+L
Sbjct: 36  DDAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNIL 95

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           INC C +G  + +F VLG+IL+  + PNT+T   LI GLC +  + ++     KL     
Sbjct: 96  INCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGF 155

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V+  TL+NGLC+      A+KL   ++ +   I   +VV YN+IIDGLCKD  V++
Sbjct: 156 QINHVSCGTLLNGLCKIGEMRGAMKLL-RVIEDRSTIT--NVVMYNTIIDGLCKDKLVNE 212

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +L  +M  R   PNVITY++LICGFC      EA  L  EM+   + PDV T+N +++
Sbjct: 213 AYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMD 272

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNP-DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
             CK+GK   ++ + E  I R   P D VTY SL+DG C    + +A  LF  M  +  +
Sbjct: 273 ALCKEGKSYALDLIDE--IHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRIQ 330

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +VY+++ L     K  ++++A   ++ +L +     V TY  ++SGL + G L +AL +
Sbjct: 331 PNVYTHSXLTGC-VKGGRLKNAQEFFQHLLVKGYCIDVWTYTVMISGLCKEGMLDEALAM 389

Query: 422 IDKMQLNDVVPDSFTFATYI 441
             KM+ N  +P++ TF   I
Sbjct: 390 KXKMEDNGCIPNAVTFEIII 409



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 203/391 (51%), Gaps = 5/391 (1%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A   F ++ +    P ++ FN ++    + +    A+ L ++M  E   I +P++VT N
Sbjct: 37  DAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQM--EVKGI-EPNLVTLN 93

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +I+  C  G +  +  +L ++      PN +T  +LI G C  D+ +++     +++  
Sbjct: 94  ILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQ 153

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G Q + V+   ++N  CK G+M    +LL ++  R    + V YN+++DG C    ++ A
Sbjct: 154 GFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEA 213

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            +L+  M  +G   +V +Y+ LI   C   ++ +A  L +EM+ + I P V TYN L+  
Sbjct: 214 YDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDA 273

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L + G    AL LID++       D  T+ + +DG CKN ++ +A+ +F+ ++  + +  
Sbjct: 274 LCKEGK-SYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRIQPN 332

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           + T++ L  G  K GRLK A + F  L  KG   DV T + MI  LCKEG +D+A  +  
Sbjct: 333 VYTHSXL-TGCVKGGRLKNAQEFFQHLLVKGYCIDVWTYTVMISGLCKEGMLDEALAMKX 391

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            ME   C+P+ VTF  ++    + ++  K +
Sbjct: 392 KMEDNGCIPNAVTFEIIICSLFEKDENDKAL 422



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 147/309 (47%), Gaps = 1/309 (0%)

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           D  VD A     +M      P +I +N ++     +  +  A  L  +M   G++P++VT
Sbjct: 32  DNVVDDAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVT 91

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
            N +IN  C  G M     +L  +++ G  P+T+T  +L+ G CL   + ++      +V
Sbjct: 92  LNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLV 151

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           ++G + +  S   L+N  CK  ++  A+ L R +       +V+ YNT++ GL +   + 
Sbjct: 152 AQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVN 211

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A  L  +M +    P+  T+ T I G C  G ++EA  + + +     +  + TYN L+
Sbjct: 212 EAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILM 271

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           + LCK G+   A  L   +  +    DVVT ++++   CK   +DKA  L   M+ +   
Sbjct: 272 DALCKEGK-SYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRIQ 330

Query: 537 PSEVTFCTL 545
           P+  T   L
Sbjct: 331 PNVYTHSXL 339



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 136/308 (44%), Gaps = 15/308 (4%)

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
           N  D  + + NR+L LM      P  + +N ++     +     A  L   M  KG   +
Sbjct: 33  NVVDDAVSQFNRML-LMRH---TPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPN 88

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + + NILIN  C    +  +  +  ++L    +P+ +T  TL+ GL     +  +L   D
Sbjct: 89  LVTLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHD 148

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           K+       +  +  T ++GLCK G +  A+++ + I +      +  YN +I+GLCK  
Sbjct: 149 KLVAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDK 208

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A  L+  +  +G  P+V+T  T+I   C  GQ+ +A  LL +M  KN  P   T+ 
Sbjct: 209 LVNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYN 268

Query: 544 TLLRGFVQNNKKSKVVVL--LHKMAAEKLVVSDLSL---------SSKVVDLLSKDKKYR 592
            L+    +  K   + ++  +H+      VV+  SL           K + L  K K+ R
Sbjct: 269 ILMDALCKEGKSYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERR 328

Query: 593 ECLNQFRH 600
              N + H
Sbjct: 329 IQPNVYTH 336



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 83/176 (47%)

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           D  V+DAV  +  ML  R  P +I +N +L    ++     A+ L  +M++  + P+  T
Sbjct: 32  DNVVDDAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVT 91

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
               I+  C  G +  +  V   I     +    T   LI GLC    ++ +     +L 
Sbjct: 92  LNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLV 151

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            +G   + V+C T+++ LCK G+M  A  LL  +E ++ + + V + T++ G  ++
Sbjct: 152 AQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKD 207


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 261/528 (49%), Gaps = 19/528 (3%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           F+ MI+    P + +  I+L +L  ++  +   ++++ +  +G+ P +   N +++   K
Sbjct: 228 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 287

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNV 186
            G       +   + R     + VT+N LING    G++ EA R    +  + FA  P  
Sbjct: 288 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP-- 345

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
            +FN LI G C+      A  + +EM+N   A   P   TYN  I  LC  G +D A+EL
Sbjct: 346 YSFNPLIEGYCKQGLFDDAWGVTDEMLN---AGIYPTTSTYNIYICALCDFGRIDDAREL 402

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L  M      P+V++YN+L+ G+  +  + EA  LF ++    + P +VT+N +I+  C+
Sbjct: 403 LSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCE 458

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G ++   RL E M  + + PD +TY +L+ GF   G +S A E++  M+ KG + D Y+
Sbjct: 459 SGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYA 518

Query: 367 YNILINANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           Y        +    + A  L+ EM++ +   P +  YN  + GL +VGNL  A++   K+
Sbjct: 519 YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 578

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
               +VPD  T+ T I G  +NG    A  ++  +   +    + TY  LI G  K GRL
Sbjct: 579 FRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRL 638

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A +    ++ +G  P+V+T + +++ +CK G +D+A   L  ME +   P++ ++  L
Sbjct: 639 EQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 698

Query: 546 LRGFVQNN---KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
               +  N   +K + VV L+K   +K +  D      +   L KD +
Sbjct: 699 ----ISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 742



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 217/489 (44%), Gaps = 35/489 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   ++ MI+    P + +F  +L    K    + V  ++  +    +       N+L
Sbjct: 257 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 316

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           IN   K G    A    G + RS F     +FN LI G C +G   +A  +  ++     
Sbjct: 317 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 376

Query: 178 -------NVFAC-------------------DPNVVTFNTLINGLCRTRNTLVALKLFEE 211
                  N++ C                    P+VV++NTL++G  +    + A  LF++
Sbjct: 377 YPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDD 436

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           +         P +VTYN++IDGLC+ G ++ A+ L  +M  + I P+VITY +L+ GF  
Sbjct: 437 LR---AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 493

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN-PDTV 330
             +   A  ++ EM+  G++PD   +        + G  DK  RL E M+    + PD  
Sbjct: 494 NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLT 553

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
            YN  +DG C VG + +A E    +   G   D  +Y  +I    ++ + + A  LY EM
Sbjct: 554 IYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM 613

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           L +R+ PSVITY  L+ G  + G L  A +   +M+   V P+  T    + G+CK G +
Sbjct: 614 LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI 673

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            EA +    +          +Y  LI+  C   + +   KL+  +  K   PD  T   +
Sbjct: 674 DEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 733

Query: 511 IHWLCKEGQ 519
              L K+ +
Sbjct: 734 FKHLEKDHE 742



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 163/359 (45%), Gaps = 10/359 (2%)

Query: 24  CSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTS 83
           C FGR  + +  LSS    D  S    ++   K G     EA   FD +      P + +
Sbjct: 391 CDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFV--EASLLFDDLRAGDIHPSIVT 448

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  L+  L ++   +    L + + +  +FPD+     L+    K G  S A  V   +L
Sbjct: 449 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 508

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD---PNVVTFNTLINGLCRTR 200
           R    P+   +     G    G   +A RL +++   A D   P++  +N  I+GLC+  
Sbjct: 509 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM--VATDHHAPDLTIYNVRIDGLCKVG 566

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           N + A++ F+  +   G +  PD VTY ++I G  ++G    A+ L  +M  + + P+VI
Sbjct: 567 NLVKAIE-FQRKIFRVGLV--PDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 623

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY  LI G       ++A     EM   GV+P+V+T NA++   CK G +D+  R L  M
Sbjct: 624 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 683

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
            + G+ P+  +Y  L+   C   +     +L+  M+ K    D Y++  L     KD +
Sbjct: 684 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 742


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 229/467 (49%), Gaps = 9/467 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++ A +  D +    P+P +++F  LL+ L +      +  LF  +    + PD+    +
Sbjct: 112 ADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGI 171

Query: 122 LINCLCKMGITSGAFVVLGRILR--SCFTPNTVTFNFLINGLCAEGRIMEAARLF--KKL 177
           L+N LCK G+   A  VL R+    S    + V  N +++GLC  GR+ +A      +  
Sbjct: 172 LLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMR 231

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
            V  C PN VT+N L +  CR  +  +A ++ E M  E      P+V+T N+I+ GLC+ 
Sbjct: 232 QVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEG---VTPNVITMNTIVGGLCRV 288

Query: 238 GFVDKAKELLLQMKDRNINP--NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           G V  A +   + +   +    N +TY++L+  F   ++   A  LF EM D G  PD V
Sbjct: 289 GRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAV 348

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            +  MI+   + G++     +   M + G   D   YN L+ GFC   R+  A +LF  M
Sbjct: 349 MYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEM 408

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              G + DVY+YN L++  CK         L   M+ +  +PSV+T+ TL+ G  + G  
Sbjct: 409 KGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKT 468

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +ALK+   M    + P++  + T ID LCK+  V  A+++F  +R       + TYN L
Sbjct: 469 DEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNAL 528

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
           + GL      + A +L  +++ +   PD VT   ++ WL + G+ ++
Sbjct: 529 LKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETER 575



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 235/481 (48%), Gaps = 19/481 (3%)

Query: 77  PSPGMTSFTILLTMLAK-NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
           P P   S ++L  +LA+ +   D    L   L +    PD+   N L++ L + G   G 
Sbjct: 94  PPP---SASLLSKLLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGM 150

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD--PNVVTFNTLI 193
             +   +  +   P+ VT+  L+N LC  G + +A ++  +++    D   ++V  NT++
Sbjct: 151 TELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVV 210

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           +GLC+      A+   +E + +    C P+ VTYN + D  C+ G +D A +++ +M+  
Sbjct: 211 DGLCKIGRLQDAIVFVDERMRQVHG-CAPNTVTYNCLADACCRVGDIDMACQIVERMEKE 269

Query: 254 NINPNVITYNSLICGFC-------CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
            + PNVIT N+++ G C        +D ++E +  ++E   N      VT++ +++    
Sbjct: 270 GVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGN-----AVTYSTLVSAFLH 324

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
              +     L   M  +G  PD V Y +++ G    GR+  A  +  SM   G + D  +
Sbjct: 325 CNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKA 384

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YNILI   C+ +++ +A  L+ EM    ++P V TYNTLLS L + G+     +L+  M 
Sbjct: 385 YNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMI 444

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            +   P   TF T + G CK G   EA+++F+++   + +     YN LI+ LCK   + 
Sbjct: 445 DDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVD 504

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A KLF  ++      +V T + ++  L  +   +KA +L+  M+ + C P  VT   L+
Sbjct: 505 VAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLM 564

Query: 547 R 547
            
Sbjct: 565 E 565



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 236/504 (46%), Gaps = 32/504 (6%)

Query: 77  PSPGMTSFT-ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
           P+P   + T IL  +L  +      +SL +   S GL  +L+ L         +G  S A
Sbjct: 27  PTPNTPNATAILADLLHGHTPSTATLSLLR--ASPGLASELYGL---------IGEPSHA 75

Query: 136 FV------VLGRILRSCFTPNTVTFNFLINGLCAE-GRIMEAARLFK-KLNVFACDPNVV 187
           F       +     R C  P + +   L++ L A      +AA   +  L   A  P+V 
Sbjct: 76  FTPASLATLHSLAARHCIPPPSAS---LLSKLLARFSSPADAASFLRDSLAAGAPAPDVS 132

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           TFN+L++ L R  N     +LF  M     A  KPD+VTY  +++ LCK G V  A ++L
Sbjct: 133 TFNSLLSALGRAGNLRGMTELFTSMRE---ASVKPDIVTYGILLNRLCKAGLVGDALKVL 189

Query: 248 LQMKD--RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD--NGVQPDVVTFNAMINY 303
            +M     ++  +++  N+++ G C +   ++A     E M   +G  P+ VT+N + + 
Sbjct: 190 DRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADA 249

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK--GCR 361
            C+ G +D   +++E M + GV P+ +T N+++ G C VGR+  A + F    +     R
Sbjct: 250 CCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEAR 309

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +  +Y+ L++A      V  A+ L+ EM  +   P  + Y T++SGL Q G L DA  +
Sbjct: 310 GNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNI 369

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
              M+      D   +   I G C+   + EA Q+F+ ++    +  + TYN L++ LCK
Sbjct: 370 AASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCK 429

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G      +L   +   G  P VVT  T++H  CK G+ D+A  +   M      P+ V 
Sbjct: 430 AGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVI 489

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
           + TL+    ++ +    + L  +M
Sbjct: 490 YNTLIDFLCKSREVDVAIKLFDEM 513



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 228/488 (46%), Gaps = 23/488 (4%)

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFL--INGLCAE--GRIMEAARLF--------KKLNV 179
           T  A  +L  +L    TP+T T + L    GL +E  G I E +  F          L  
Sbjct: 31  TPNATAILADLLHG-HTPSTATLSLLRASPGLASELYGLIGEPSHAFTPASLATLHSLAA 89

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             C P   + + L   L R  +   A     + +        PDV T+NS++  L + G 
Sbjct: 90  RHCIPPP-SASLLSKLLARFSSPADAASFLRDSLA--AGAPAPDVSTFNSLLSALGRAGN 146

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG--VQPDVVTF 297
           +    EL   M++ ++ P+++TY  L+   C      +A  +   M   G  V  D+V  
Sbjct: 147 LRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVIL 206

Query: 298 NAMINYNCKDGKM-DKVNRLLELMIQ-RGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           N +++  CK G++ D +  + E M Q  G  P+TVTYN L D  C VG I  A ++   M
Sbjct: 207 NTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERM 266

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE--RIRPSVITYNTLLSGLFQVG 413
             +G   +V + N ++   C+  +V  A+  +RE  +     R + +TY+TL+S      
Sbjct: 267 EKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCN 326

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           N+  A++L  +M      PD+  + T I GL + G +++A  +  +++    +L  + YN
Sbjct: 327 NVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYN 386

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI G C+  RL  A +LF  ++  G  PDV T +T++  LCK G     ++LL +M   
Sbjct: 387 ILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDD 446

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            C PS VTF TL+ G+ +  K  + + +   M  E  +  +  + + ++D L K ++   
Sbjct: 447 GCQPSVVTFGTLVHGYCKAGKTDEALKIFRSM-GEARIQPNTVIYNTLIDFLCKSREVDV 505

Query: 594 CLNQFRHL 601
            +  F  +
Sbjct: 506 AIKLFDEM 513


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 239/472 (50%), Gaps = 8/472 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++++L+    KN   +     +  + + G+   ++ LN ++    K      AF +
Sbjct: 178 PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTM 237

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
               L S    N  TFN L++ LC EG++ EA  L+ ++      PNVV++N +I G CR
Sbjct: 238 FNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCR 296

Query: 199 TRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
             N   A K+++EM+ N F     P+ VT+  ++DG  K G ++ A  +  +MKD NI P
Sbjct: 297 KDNINAACKVYKEMLDNGF----TPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILP 352

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
              T   +I G C      E + LF + +  G  P  + +N +I+   K+G ++  + + 
Sbjct: 353 TDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVY 412

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + G+ P TVTY SL+DGFC    I  A +L   M  KG + D+ +Y  LI+  CK 
Sbjct: 413 REMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKR 472

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP-DSFT 436
           + ++ A  L  E+    + P+   YN++++G   + N+ +A+ L  KM +N+ +P D  T
Sbjct: 473 RDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM-VNEGIPCDLKT 531

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           + + IDGL K+G +L A  +   + +         +  LINGLC  G+ + A K+   + 
Sbjct: 532 YTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMN 591

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            K  IP V+  +T+I    KEG + +A  L  +M  +  VP  +T+  L+ G
Sbjct: 592 GKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 250/533 (46%), Gaps = 39/533 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   +FT ++T   K       + L   + + G   +L V   L+   C  G    A V+
Sbjct: 108 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVL 167

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  I  S   PN VT++ LI+G C  G I +A   + ++       +V + N+++ G  +
Sbjct: 168 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 227

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            ++   A  +F + +    A    +V T+N+++  LCK+G +++A  L  ++  + I+PN
Sbjct: 228 CQSWQNAFTMFNDALESGLA----NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPN 283

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V++YN++I G C  D+   A  ++ EM+DNG  P+ VTF  +++   K G ++    +  
Sbjct: 284 VVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFH 343

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M    + P   T   ++ G C  GR    R+LF   VS+G       YN +I+   K+ 
Sbjct: 344 RMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEG 403

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +  A  +YREM    I PS +TY +L+ G  +  N+  ALKL++ M+   +  D   + 
Sbjct: 404 NINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYG 463

Query: 439 TYIDGLCK------------------------------NGF-----VLEAVQVFQAIRNC 463
           T IDG CK                               GF     V EA+ +++ + N 
Sbjct: 464 TLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE 523

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                ++TY  LI+GL K GRL  A  +   +  KG +PD    + +I+ LC +GQ + A
Sbjct: 524 GIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 583

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
             +L DM  KN +PS + + TL+ G  +     +   L  +M    LV  +++
Sbjct: 584 RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNIT 636



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 243/491 (49%), Gaps = 13/491 (2%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
           F +  + G+  D    ++ ++ LC    +  A  +L  +  + + P   TF  +I     
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           EG + EA RL   +       N+    +L+ G C   N   AL L  E ++E G +  P+
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE-ISESGLV--PN 179

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
            VTY+ +IDG CK+G ++KA E   +MK + I  +V + NS++ G+     W+ A  +F 
Sbjct: 180 KVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFN 239

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           + +++G+  +V TFN ++++ CK+GKM++   L + +I +G++P+ V+YN+++ G C   
Sbjct: 240 DALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKD 298

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            I+ A +++  M+  G   +  ++ IL++   K   +E+A  ++  M    I P+  T  
Sbjct: 299 NINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLG 358

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            ++ GL + G   +   L +K      VP    + T IDG  K G +  A  V++ +   
Sbjct: 359 IIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM--- 415

Query: 464 KCELRIE----TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
            CE+ I     TY  LI+G CK   +  A KL + ++ KG   D+    T+I   CK   
Sbjct: 416 -CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRD 474

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           M  A++LL ++      P+   + +++ GF   N   + + L  KM  E  +  DL   +
Sbjct: 475 MKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG-IPCDLKTYT 533

Query: 580 KVVDLLSKDKK 590
            ++D L K  +
Sbjct: 534 SLIDGLLKSGR 544



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 191/381 (50%), Gaps = 3/381 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   +D +I    SP + S+  ++    +    +    ++K +  NG  P+     +L
Sbjct: 266 NEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTIL 325

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++   K G    AF +  R+  +   P   T   +I GLC  GR  E   LF K      
Sbjct: 326 MDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGF 385

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P  + +NT+I+G  +  N  +A  ++ EM  E G    P  VTY S+IDG CK   +D 
Sbjct: 386 VPTCMPYNTIIDGFIKEGNINLASNVYREMC-EVG--ITPSTVTYTSLIDGFCKGNNIDL 442

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL  MK + +  ++  Y +LI GFC   D K A  L  E+   G+ P+   +N+MI 
Sbjct: 443 ALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMIT 502

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                  +++   L + M+  G+  D  TY SL+DG    GR+  A ++   M+SKG   
Sbjct: 503 GFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILP 562

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  ++ +LIN  C   + E+A  +  +M  + + PSV+ YNTL++G F+ GNL +A +L 
Sbjct: 563 DDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLH 622

Query: 423 DKMQLNDVVPDSFTFATYIDG 443
           D+M    +VPD+ T+   ++G
Sbjct: 623 DEMLDRGLVPDNITYDILVNG 643



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 242/493 (49%), Gaps = 16/493 (3%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P +  +N+L+  + +  +T  A  +  ++L    T +  T + ++     EG I+EA + 
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           F +      + +   ++  ++ LC   N+  AL L  EM     A   P   T+ S+I  
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMR---AAGWIPPEGTFTSVITA 119

Query: 234 LCKDGFVDKAKELLLQMKDRNIN----PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
             K+G V +A    L++KD  +N     N+    SL+ G+C   + + A  L  E+ ++G
Sbjct: 120 CVKEGNVAEA----LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESG 175

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           + P+ VT++ +I+  CK+G ++K       M  +G+     + NS+++G+        A 
Sbjct: 176 LVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAF 235

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            +F   +  G   +V+++N L++  CK+ K+ +A  L+ E++++ I P+V++YN ++ G 
Sbjct: 236 TMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGH 294

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            +  N+  A K+  +M  N   P++ TF   +DG  K G +  A  +F  +++       
Sbjct: 295 CRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTD 354

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            T   +I GLCK GR      LF++   +G +P  +  +T+I    KEG ++ A+++  +
Sbjct: 355 TTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYRE 414

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD- 588
           M      PS VT+ +L+ GF + N     + LL+ M  + L + D+     ++D   K  
Sbjct: 415 MCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKM-DIKAYGTLIDGFCKRR 473

Query: 589 --KKYRECLNQFR 599
             K   E LN+ R
Sbjct: 474 DMKSAHELLNELR 486



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/418 (23%), Positives = 194/418 (46%), Gaps = 5/418 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++   N L+  + R   T  A +L  +M+         D  T + ++    K+G + +A
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLL---VGVTGDCFTLHVMLRACLKEGNILEA 59

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           ++  LQ K R +  +   Y+  +   C   +   A  L  EM   G  P   TF ++I  
Sbjct: 60  EQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITA 119

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K+G + +  RL + M+  G + +     SLM G+C+ G +  A  L   +   G   +
Sbjct: 120 CVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPN 179

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y++LI+  CK+  +E A   Y EM ++ IR SV + N++L G  +  +  +A  + +
Sbjct: 180 KVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFN 239

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
              L   + + FTF T +  LCK G + EA  ++  +        + +YN +I G C+  
Sbjct: 240 D-ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKD 298

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  ACK++  +   G  P+ VT + ++    K+G ++ A  +   M+  N +P++ T  
Sbjct: 299 NINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLG 358

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            +++G  +  +  +   L +K  ++  V + +  ++ ++D   K+       N +R +
Sbjct: 359 IIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNT-IIDGFIKEGNINLASNVYREM 415


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 244/487 (50%), Gaps = 17/487 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S  IL+  L   ++      + + L ++G   D    N L+   C+ G    A  V
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGA-ADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +    R+  T N VT+  LI+G C  GR+ +A RL   + V    P+  T+NT++ GLC 
Sbjct: 173 V-EAARASGTANVVTYTALIDGYCRSGRLADALRLIASMPVA---PDTYTYNTVLKGLCC 228

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +    A +L  EM+      C P+ VT+ + I   C++G +D+A ELL QM      P+
Sbjct: 229 AKQWEQAEELMREMIRNS---CHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPD 285

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           VI Y++L+ GF       EA  L   M+    +P+ V +NA +   C  G+ ++V  L+ 
Sbjct: 286 VIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIA 342

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+++   P+  T+++L++  C    +  A E+   M   G   DV SYN +I+      
Sbjct: 343 EMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQA 402

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           + +DA+ L + ML    +P  I++N +L  L +     DA++L+ KM   D   +  TF 
Sbjct: 403 RADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFN 459

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             ID LC+NG V +A++VF+ +   +C   I TY+ LING  + G  + A  LF  +  +
Sbjct: 460 ILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCR 519

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
               D+ + +  +  LC   + D A +L+ DM  ++C+P+EVTF  L+    Q    ++ 
Sbjct: 520 A---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRA 576

Query: 559 VVLLHKM 565
           + +  +M
Sbjct: 577 IDVYEQM 583



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 230/471 (48%), Gaps = 15/471 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           +  M  +P   ++  +L  L   KQ++    L + +  N   P+       I   C+ G+
Sbjct: 207 IASMPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGL 266

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L ++ +   TP+ + ++ L+NG    GR+ EA +L   LN   C PN V +N 
Sbjct: 267 LDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKL---LNTMLCRPNTVCYNA 323

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
            + GLC         +L  EMV +    C P+  T++++I+ LC++  V+ A E+L QM+
Sbjct: 324 ALKGLCIAGRWEEVGELIAEMVRKD---CPPNDATFSTLINSLCQNRLVEYAVEVLEQMQ 380

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                P+V++YN++I  F       +A  L   M+    +PD ++FNA++   CK  +  
Sbjct: 381 KYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWY 437

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               L+  M+++    + +T+N L+D  C  G++  A E+F  M    C  D+ +Y+ LI
Sbjct: 438 DAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLI 497

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N   +    E A  L+R M     R  + +YN  L GL       DA +LI  M   D +
Sbjct: 498 NGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCL 554

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  TF   I  LC+ G V  A+ V++ +        I TYN LING  + GRL  A K 
Sbjct: 555 PNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKF 614

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
              +  +   PD ++ ++++  LC+  +   A  L+ +M  KNC P+EVTF
Sbjct: 615 LSTMPCE---PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 229/462 (49%), Gaps = 15/462 (3%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
            + + S  + PD +  N ++  LC       A  ++  ++R+   PN VTF   I   C 
Sbjct: 204 LRLIASMPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQ 263

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
            G +  A  L +++  + C P+V+ ++TL+NG         ALKL   M      +C+P+
Sbjct: 264 NGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTM------LCRPN 317

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
            V YN+ + GLC  G  ++  EL+ +M  ++  PN  T+++LI   C     + A  +  
Sbjct: 318 TVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLE 377

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +M   G  PDVV++N +I+      + D   +LL+ M+     PDT+++N+++   C   
Sbjct: 378 QMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAK 434

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           R   A EL   M+ K CR +  ++NILI++ C++ +V+DA+ ++  M   R  P ++TY+
Sbjct: 435 RWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYS 494

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +L++G  + G    A  L   M       D F++   + GLC      +A ++   +   
Sbjct: 495 SLINGFSEQGLDEMAFDLFRSMPCR---ADIFSYNATLKGLCMAARWDDAGELIADMVTE 551

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
            C     T+N LI+ LC+ G +  A  ++ ++   G  PD+ T + +I+   ++G++D A
Sbjct: 552 DCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 611

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
              L  M    C P  +++ ++L+G  +  +      L+ +M
Sbjct: 612 LKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEM 650



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 192/396 (48%), Gaps = 14/396 (3%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P V++ N LI  LC  R    A ++ E +     A    D V++N+++ G C+DG +  A
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAA----DAVSHNTLVAGYCRDGSLGDA 169

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E +++    +   NV+TY +LI G+C      +A  L   M    V PD  T+N ++  
Sbjct: 170 -ERVVEAARASGTANVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKG 225

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C   + ++   L+  MI+   +P+ VT+ + +  FC  G + RA EL   M   GC  D
Sbjct: 226 LCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPD 285

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V  Y+ L+N   +  +V++A+ L   ML    RP+ + YN  L GL   G   +  +LI 
Sbjct: 286 VIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIA 342

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M   D  P+  TF+T I+ LC+N  V  AV+V + ++       + +YN +I+      
Sbjct: 343 EMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQA 402

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           R   A KL   +  K   PD ++ + ++  LCK  +   A +L+  M  K+C  +E+TF 
Sbjct: 403 RADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFN 459

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            L+    QN +    + +   M   + +   ++ SS
Sbjct: 460 ILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSS 495



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 9/234 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV     M+K        +F IL+  L +N Q    + +F+ +      PD+   + LI
Sbjct: 438 DAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLI 497

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N   + G+   AF +   +   C   +  ++N  + GLC   R  +A  L   +    C 
Sbjct: 498 NGFSEQGLDEMAFDLFRSM--PCRA-DIFSYNATLKGLCMAARWDDAGELIADMVTEDCL 554

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VTFN LI+ LC+      A+ ++E+M  ++G    PD+ TYN++I+G  + G +D A
Sbjct: 555 PNEVTFNILISSLCQKGLVNRAIDVYEQM-PKYGIT--PDIFTYNALINGYSEQGRLDDA 611

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
            + L  M      P+ I+YNS++ G C  + WK+A+ L  EM+     P+ VTF
Sbjct: 612 LKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 227/469 (48%), Gaps = 13/469 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +  A +  D +    P+P ++ F  LLT L +      +  LF  +    + PD+    +
Sbjct: 112 AEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGI 171

Query: 122 LINCLCKMGITSGAFVVLGRILR--SCFTPNTVTFNFLINGLCAEGRIMEAARLF--KKL 177
           L+N LCK G    A  VL R+    S   P+    N +++GLC  GR+ +A      +  
Sbjct: 172 LLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMR 231

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           +V  C PN VT+N L +  CR  +  +A K+   M  E  A   P+V+T N+II GLC+ 
Sbjct: 232 HVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVA---PNVITMNTIIGGLCRV 288

Query: 238 GFVDKAKELLLQMKDRNINP----NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           G V  A E   +   R + P    N +TY++L   F   ++   A  LF EM D+G +PD
Sbjct: 289 GRVGAALEFFRE--KRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPD 346

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            V +  MI+   + G++         M + G   D   YN L+ GFC   ++  A EL  
Sbjct: 347 AVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLE 406

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M   G + DVY+YN L++  CK         L   M+ +  +PSV+T+ TL+ G  + G
Sbjct: 407 EMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAG 466

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
              +AL++   M    + P++  + T ID LCK+  V  A+++F  +R       + TYN
Sbjct: 467 KTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYN 526

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
            L+ GL      + A +L  R++ +   P+ VT   ++ WL + G+ ++
Sbjct: 527 ALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETER 575



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 228/478 (47%), Gaps = 15/478 (3%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKR--LNSNGLFPDLFVLNLLINCLCKMGITSG 134
           P P      +LL+ L +        + F R  L S    PD+ + N L+  L + G   G
Sbjct: 94  PPPS----ALLLSKLVRRFSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRG 149

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD--PNVVTFNTL 192
              +   +  +   P+ VT+  L+NGLC  G + +A ++  +++    D  P++   NT+
Sbjct: 150 MTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTV 209

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           ++GLC+      A+   +E +      C P+ VTYN + D  C+ G +  A +++ +M+ 
Sbjct: 210 VDGLCKIGRLQQAIIFVDERMRHVHG-CAPNAVTYNCLADAFCRVGDIGMACKIVARMEK 268

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV----VTFNAMINYNCKDG 308
             + PNVIT N++I G C V     A   F E     V P+     VT++ + +      
Sbjct: 269 EGVAPNVITMNTIIGGLCRVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLASAFLHCN 326

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
            +D    L   M   G  PD V Y +++ G    GR+  A     SM   G + D  +YN
Sbjct: 327 NVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYN 386

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           ILI   C+ +K+ +A  L  EM    ++P V TYNTLLSGL + G+     +L+  M  +
Sbjct: 387 ILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDD 446

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
              P   TF T + G CK G   EA+++F+++   + +     YN LI+ LCK   +  A
Sbjct: 447 GCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVA 506

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            KLF  ++ K    +V T + ++  L  +   +KA +L+  M  + C P+ VT   L+
Sbjct: 507 IKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLM 564



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 208/430 (48%), Gaps = 13/430 (3%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+   FN L+  L   G +     LF  +   +  P+VVT+  L+NGLC++ +   ALK
Sbjct: 128 APDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALK 187

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN---PNVITYNS 264
           + + M +    +C PD+   N+++DGLCK G + +A  + +  + R+++   PN +TYN 
Sbjct: 188 VLDRMSSPGSDVC-PDIAILNTVVDGLCKIGRLQQAI-IFVDERMRHVHGCAPNAVTYNC 245

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ-R 323
           L   FC V D   A  +   M   GV P+V+T N +I   C+ G+   V   LE   + R
Sbjct: 246 LADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGR---VGAALEFFREKR 302

Query: 324 GVNPDT----VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
            V P+     VTY++L   F     +  A ELF  M   G R D   Y  +I+   +  +
Sbjct: 303 TVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGR 362

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           + DA      M     +     YN L+ G  +   L +A +L+++M+   + PD +T+ T
Sbjct: 363 LLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNT 422

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            + GLCK G      ++   + +  C+  + T+  L++G CK G+   A ++F  +    
Sbjct: 423 LLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEAR 482

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P+ V  +T+I +LCK  ++D A  L  +M  KN   +  T+  LL+G        K  
Sbjct: 483 IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAF 542

Query: 560 VLLHKMAAEK 569
            L+ +M  E+
Sbjct: 543 ELMDRMREER 552



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 215/432 (49%), Gaps = 12/432 (2%)

Query: 169 EAARLFK-KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
           EAA   +  L   A  P++  FN+L+  L R  N     +LF  M +   A  KPDVVTY
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRD---ASVKPDVVTY 169

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKD--RNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
             +++GLCK G V  A ++L +M     ++ P++   N+++ G C +   ++A     E 
Sbjct: 170 GILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDER 229

Query: 286 MDN--GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           M +  G  P+ VT+N + +  C+ G +    +++  M + GV P+ +T N+++ G C VG
Sbjct: 230 MRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVG 289

Query: 344 RISRARELFVS--MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
           R+  A E F     V    R +  +Y+ L +A      V+ A+ L+ EM     RP  + 
Sbjct: 290 RVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVM 349

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y T++SGL Q G L DA      M+      D+  +   I G C+   + EA ++ + ++
Sbjct: 350 YFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMK 409

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               +  + TYN L++GLCK G      +L   +   G  P VVT  T++H  CK G+ D
Sbjct: 410 GVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTD 469

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A  +   M+     P+ V + TL+  F+  +++  V + L     EK V ++++  + +
Sbjct: 470 EALRIFRSMDEARIQPNTVIYNTLI-DFLCKSREVDVAIKLFDEMREKNVPANVTTYNAL 528

Query: 582 VDLLSKDKKYRE 593
           +  L +DKK  E
Sbjct: 529 LKGL-QDKKMAE 539



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 4/194 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA    + M  +   P + ++  LL+ L K   +  V  L   +  +G  P +     L
Sbjct: 399 HEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTL 458

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK G T  A  +   +  +   PNTV +N LI+ LC    +  A +LF ++     
Sbjct: 459 VHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNV 518

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             NV T+N L+ GL   +    A +L + M  E    C P+ VT + +++ L + G  ++
Sbjct: 519 PANVTTYNALLKGLQDKKMAEKAFELMDRMREER---CTPNYVTVDVLMEWLPEIGETER 575

Query: 243 AKELLLQMKDRNIN 256
            K   +Q +D+  N
Sbjct: 576 LK-CFMQQRDQKDN 588


>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 408

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/452 (31%), Positives = 227/452 (50%), Gaps = 75/452 (16%)

Query: 44  GTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL 103
            T   +F N+ H    I+       F+ +    P+P ++ F  +L  LA + +Y   +S 
Sbjct: 32  STIYTQFNNNPHHENLISR------FNRLTNQIPTPPISQFGRILASLALSNRYSIALSF 85

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
            ++L+  G+ PDLF  N+LINC          F  LG              +FL      
Sbjct: 86  HQKLHFKGIKPDLFTYNVLINC----------FSQLGHT------------HFL------ 117

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
                                + V++ TLINGLC+   T  AL+L +E VNE   I + D
Sbjct: 118 ---------------------DRVSYETLINGLCKVGETRAALRLLKE-VNE--KIVQYD 153

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           VV Y +II+GLCKD  VD A +L  +M  + ++P+V TYN++I GFC V   K+A  LF 
Sbjct: 154 VVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFN 213

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +M    V+ D  TFN +++  CK+G + +   ++ +M++ GV PD +TYNSLMDG+CLV 
Sbjct: 214 DMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVK 273

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            + +A+ +F +MV +G   +V + N                 L++EM  + I P  I Y+
Sbjct: 274 EVDKAKNIFNTMVQRGVTANVRTMN-----------------LFQEMHCKEIIPDTIAYS 316

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +L+ G  + G +  AL+L+D+M      P+  T+ + +  LCK   V + + + + I+  
Sbjct: 317 SLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVK 376

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
             +    TY  L NGL K GRL+ A ++F  L
Sbjct: 377 GIQPDAYTYTILTNGLFKDGRLEEAREIFPDL 408



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 170/363 (46%), Gaps = 33/363 (9%)

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P +  +  ++      + +  A     ++   G++PD+ T+N +IN   + G    ++R 
Sbjct: 61  PPISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLGHTHFLDR- 119

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
                        V+Y +L++G C VG    A  L   +  K  ++DV  Y  +IN  CK
Sbjct: 120 -------------VSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCK 166

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
           D+ V+DA  LY EM+++R+ P V TYN ++ G   VG L DA+ L + M+L +V  D +T
Sbjct: 167 DKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYT 226

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           F T +   CK G V E   V   +     +  I TYN L++G C +  +  A  +F+ + 
Sbjct: 227 FNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMV 286

Query: 497 HKGP------------------IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            +G                   IPD +  S++I   CK G++ +A +L+ +M  +   P+
Sbjct: 287 QRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPN 346

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            +T+ ++L    + +   K + LL K+   K +  D    + + + L KD +  E    F
Sbjct: 347 IITYNSILYALCKIHHVEKTIALLRKIKV-KGIQPDAYTYTILTNGLFKDGRLEEAREIF 405

Query: 599 RHL 601
             L
Sbjct: 406 PDL 408


>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 805

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 160/538 (29%), Positives = 259/538 (48%), Gaps = 75/538 (13%)

Query: 21  NFWCSFGR-------PPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMI 73
           NFW    R       PP+P   LS+   +   ++    + R        + AV  F+ M+
Sbjct: 143 NFWLDLNRSHHHQQVPPSP---LSNAVLR--LTVQNCSHFRSIPNGFVVDNAVLSFNRML 197

Query: 74  KMKPSPGMTSFTILLTMLAKNK-QYDTVVSLFKRLNSNGLFPDLFVLNLLINC------- 125
           +M+ +P +  F  +LT L K K  Y TV+SL  ++ S G+ PDLF L++LINC       
Sbjct: 198 QMRHTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYYFKMGY 257

Query: 126 -------------LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR 172
                        LC  G  + A +    +L   F  N VT+  LINGLC  G+   A +
Sbjct: 258 EPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQ 317

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FGAIC---- 220
           + +++     + NVV ++T+I+GLC+ +  + A  L+ EM+ +        F A      
Sbjct: 318 VLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVTFKAFSLFHE 377

Query: 221 ------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN--------PNVITYNSLI 266
                  P+V T+N ++D LCKDG + +AK ++++M D  +N        PN ++YN+LI
Sbjct: 378 MVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNTLI 437

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            GFC       A  L  +M D G  P+V+T+N++++  CK+  +DK   L+     +G+ 
Sbjct: 438 DGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQ 497

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD  TYN+L+DG C  GR+  A+ +F  ++ KG     ++YNI+IN  C +  +++A  L
Sbjct: 498 PDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETL 557

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM--QLNDVVPDSFTFATYIDGL 444
             +M      P V+TY T++  LF+      A KL+ ++  ++    P       Y+  L
Sbjct: 558 LSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVRVFRKSPTDIRDGRYLTTL 617

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCL---INGLCKMGRLKTACKLFHRLQHKG 499
            + G         + I   +C++R  T   L   +  L     LK   KL H  Q KG
Sbjct: 618 TQRG---------KRIPTIRCKIRCSTKETLDFRLPMLHVTSPLKD--KLHHECQWKG 664


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 214/397 (53%), Gaps = 4/397 (1%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +  +F  +I G C  G I ++  L  +L  F   PNVV + TLI+G C+      A  LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            EM  +FG +   +  TY  +I GL K+G   +  E+  +M++  + PN+ TYN ++   
Sbjct: 222 FEM-GKFGLVA--NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQL 278

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C     K+A  +F EM + GV  ++VT+N +I   C++ K ++ N++++ M    +NP+ 
Sbjct: 279 CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNL 338

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TYN+L+DGFC VG++ +A  L   + S+G    + +YN+L++  C+      A  + +E
Sbjct: 339 ITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKE 398

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    I+PS +TY  L+    +  N+  A++L   M+   +VPD  T++  I G C  G 
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQ 458

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + EA ++F+++     E     YN +I G CK G    A +LF  ++ K   P+V + S 
Sbjct: 459 MNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSY 518

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           +I  LCKE ++ +A DL+  M      PS+ T C L+
Sbjct: 519 LIRVLCKERKLKEAEDLVEKMIDSGIDPSD-TICNLI 554



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 221/445 (49%), Gaps = 4/445 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + ++Y+F+ M+     PG   F  LLT +  +  ++     F   +   +  D++   ++
Sbjct: 111 DSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIKVVLDVYSFGIV 169

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+ G    +F +L  +    F+PN V +  LI+G C +G I +A  LF ++  F  
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL 229

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N  T+  LI+GL +        +++E+M  E G    P++ TYN +++ LCKDG    
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKM-QEHGVF--PNLYTYNCVMNQLCKDGRTKD 286

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++  +M++R ++ N++TYN+LI G C      EA  +  +M    + P+++T+N +I+
Sbjct: 287 AFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLID 346

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C  GK+ K   L   +  RG++P  VTYN L+ GFC  G  S A ++   M  +G + 
Sbjct: 347 GFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP 406

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
              +Y ILI+   +   +E A+ L   M    + P V TY+ L+ G    G + +A +L 
Sbjct: 407 SKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M    + P+   + T I G CK G    A+++F+ +   +    + +Y+ LI  LCK 
Sbjct: 467 KSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKE 526

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTC 507
            +LK A  L  ++   G  P    C
Sbjct: 527 RKLKEAEDLVEKMIDSGIDPSDTIC 551



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 231/469 (49%), Gaps = 9/469 (1%)

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
           ++IN   +      +      ++   F P +  FN L+  +       +    F +  + 
Sbjct: 99  VIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK 158

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
               +V +F  +I G C       +  L  E+  EFG    P+VV Y ++IDG CK G +
Sbjct: 159 VV-LDVYSFGIVIKGCCEAGEIEKSFDLLVEL-REFG--FSPNVVIYTTLIDGCCKKGEI 214

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           +KAK+L  +M    +  N  TY  LI G       K+   ++ +M ++GV P++ T+N +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCV 274

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +N  CKDG+     ++ + M +RGV+ + VTYN+L+ G C   + + A ++   M S   
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVI 334

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
             ++ +YN LI+  C   K+  A+ L R++ S  + PS++TYN L+SG  + G+   A K
Sbjct: 335 NPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAK 394

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           ++ +M+   + P   T+   ID   ++  +  A+Q+  ++        + TY+ LI+G C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFC 454

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
             G++  A +LF  +  K   P+ V  +TMI   CKEG   +A  L  DME K   P+  
Sbjct: 455 IKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVA 514

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           ++  L+R   +  K  +   L+     EK++ S +  S  + +L+S+ K
Sbjct: 515 SYSYLIRVLCKERKLKEAEDLV-----EKMIDSGIDPSDTICNLISRAK 558



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 186/372 (50%), Gaps = 36/372 (9%)

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +V ++  +I G C   + +++  L +E+ + G  P+VV +  +I+  CK G+++K   L 
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + G+  +  TY  L+ G    G   +  E++  M   G   ++Y+YN ++N  CKD
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            + +DA  ++ EM    +  +++TYNTL+ GL +     +A K++D+M+   + P+  T+
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG-------------- 483
            T IDG C  G + +A+ + + +++      + TYN L++G C+ G              
Sbjct: 342 NTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE 401

Query: 484 ---------------------RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                                 ++TA +L   ++  G +PDV T S +IH  C +GQM++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A+ L   M  K   P+EV + T++ G+ +     + + L   M  EK +  +++  S ++
Sbjct: 462 ASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDM-EEKELAPNVASYSYLI 520

Query: 583 DLLSKDKKYREC 594
            +L K++K +E 
Sbjct: 521 RVLCKERKLKEA 532



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 139/270 (51%), Gaps = 4/270 (1%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A   FD M +   S  + ++  L+  L +  + +    +  ++ S  + P+L   N 
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNT 343

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+  C +G    A  +   +     +P+ VT+N L++G C +G    AA++ K++    
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG 403

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ VT+  LI+   R+ N   A++L   M  E G +  PDV TY+ +I G C  G ++
Sbjct: 404 IKPSKVTYTILIDTFARSDNMETAIQLRSSM-EELGLV--PDVHTYSVLIHGFCIKGQMN 460

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  L   M ++ + PN + YN++I G+C       A  LF +M +  + P+V +++ +I
Sbjct: 461 EASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLI 520

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNP-DTV 330
              CK+ K+ +   L+E MI  G++P DT+
Sbjct: 521 RVLCKERKLKEAEDLVEKMIDSGIDPSDTI 550



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 4/136 (2%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+     M ++   P + ++++L+       Q +    LFK +    L P+  + N +I 
Sbjct: 427 AIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMIL 486

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G +  A  +   +      PN  ++++LI  LC E ++ EA  L +K+     DP
Sbjct: 487 GYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDP 546

Query: 185 NVVTFNTLINGLCRTR 200
           +    +T+ N + R +
Sbjct: 547 S----DTICNLISRAK 558


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 257/513 (50%), Gaps = 3/513 (0%)

Query: 76  KPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
           K SP +  F  L+    +    +    +  +L  +G +  +   N  ++ L K+   +  
Sbjct: 90  KSSPAV--FDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRF 147

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
           + +   ++   +  N  TFN +I  L  EGR++EA  +  +       PNVVTFN +I+G
Sbjct: 148 WKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDG 207

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
             +     +ALKL  +M    G   KPD VTYNS ++G CK G +  A+E   +M  + I
Sbjct: 208 AIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEI 267

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PNV TY +L+ G+  V   + A  L  E+++ G+ P+ V +N++I++   +G M+  + 
Sbjct: 268 EPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASL 327

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           LL  MI + + PD  TY+ +++G C  G ++ A +    ++      D +S+N++IN  C
Sbjct: 328 LLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLC 387

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           +   +  A  L   M    + P V+T+ TL+    + G + +A+++ +KM      P+  
Sbjct: 388 RSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLL 447

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
            + + I+G  K G    A+ +   +R       + TYN LI+G C  G++  A  LF  +
Sbjct: 448 IYNSVINGFAKEGSFDPAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEM 506

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           ++ G +   VT +T+I+ LCK G + +A +L+  M  +  +P  VT+  L+  F +    
Sbjct: 507 RNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSP 566

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
            +V+ L   M  + +V    +  + V+ LL ++
Sbjct: 567 EEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEE 599



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 240/476 (50%), Gaps = 48/476 (10%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
            L+ L K    +    ++K + S G   ++   NL+I  L K G    A  V+ R L++ 
Sbjct: 134 FLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTG 193

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA---CDPNVVTFNTLINGLCRTRNTL 203
             PN VTFN +I+G    G +  A +L +K+ V +     P+ VT+N+ +NG C+  N  
Sbjct: 194 IWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLA 253

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           VA +  +EM+   G   +P+V TY +++DG  + G ++ A  L  ++ ++ + PN + YN
Sbjct: 254 VAEEFKKEML---GKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYN 310

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S+I       D + A  L  +M+D  + PD  T++ +I   C++G +++  + L+++++ 
Sbjct: 311 SIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEM 370

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            +  D  ++N +++  C    ++ A++L  +M  +G   DV ++  LI+ +CKD KVE+A
Sbjct: 371 SLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENA 430

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID---KMQLNDVVPDSFTFATY 440
           + +Y +M+    +P+++ YN++++G  + G+   A+ LID   +M L DVV    T+ T 
Sbjct: 431 IQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLFDVV----TYNTL 486

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I G C  G + +A  +F  +RN        TYN LIN LCK G +  A +L   +  +G 
Sbjct: 487 IHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGL 546

Query: 501 IPDVVT-----------------------------------CSTMIHWLCKEGQMD 521
           IPD VT                                     TM+  L +E  ++
Sbjct: 547 IPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVE 602



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 179/369 (48%), Gaps = 6/369 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +   F+N   K GN+   E   F   M+  +  P + ++  L+    +    +    
Sbjct: 235 DSVTYNSFVNGFCKIGNLAVAEE--FKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFR 292

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L   L   GL P+  + N +I+ L   G   GA ++L  ++     P+  T++ +I GLC
Sbjct: 293 LCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLC 352

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             G + EA +  + +   +   +  + N +IN LCR+ N   A +L   + N +     P
Sbjct: 353 RNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQL---LANMYVRGLVP 409

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           DVVT+ ++ID  CKDG V+ A ++  +M      PN++ YNS+I GF     +  A  L 
Sbjct: 410 DVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPA-ILL 468

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
           I+ +      DVVT+N +I+  C  GK+D+   L   M   G+    VTYN+L++  C  
Sbjct: 469 IDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKA 528

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G + +A+EL   MV +G   D  +Y ILI +  K    E+ + L+  M+ + + P   TY
Sbjct: 529 GHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTY 588

Query: 403 NTLLSGLFQ 411
            T++  L Q
Sbjct: 589 QTMVIPLLQ 597



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 194/400 (48%), Gaps = 39/400 (9%)

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           N +  L++ + +++ +  ICK     +++++    + G  + A E++ +++       V 
Sbjct: 71  NGISPLEVLDALISSYD-ICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVH 129

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
            +N+ +     ++D      ++ EM+  G   +V TFN +I    K+G++ +   ++   
Sbjct: 130 AWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRS 189

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM-VSKGC--RHDVYSYNILINANCKD 377
           ++ G+ P+ VT+N ++DG   +G +  A +L   M V  GC  + D  +YN  +N  CK 
Sbjct: 190 LKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKI 249

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ----------- 426
             +  A    +EML + I P+V TY TL+ G  +VG+L +A +L D++            
Sbjct: 250 GNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIY 309

Query: 427 -------------------LNDVV-----PDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
                              L+D++     PD FT++  I+GLC+NG++ EA +  Q I  
Sbjct: 310 NSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILE 369

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                   ++N +IN LC+   L  A +L   +  +G +PDVVT  T+I   CK+G+++ 
Sbjct: 370 MSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVEN 429

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           A  +   M      P+ + + +++ GF +       ++L+
Sbjct: 430 AIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLI 469


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 238/491 (48%), Gaps = 7/491 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P+P   ++  L+  L +             +  +G  PD F  N LI   C+      A 
Sbjct: 125 PAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAH 184

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
            +  ++    F+ + V++  LI G C  GRI EA  LF+++      P++ T   L+ GL
Sbjct: 185 DLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGL 240

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C        L + ++M  E G   +P    Y +++D  C++   ++A+++L +M D  + 
Sbjct: 241 CDAGRGEEGLCMLQKM-KELG--WRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLM 297

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P V+T   ++  +C       A  +F  M   G +P+V T+NA++   C  GK+ K   L
Sbjct: 298 PCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMAL 357

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           L+ M + GV PD VTYN L+ G C+ G I  A  L   M   G   D Y+YN+LI+A CK
Sbjct: 358 LDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCK 417

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             KV++A  L+  +    IRP+ +T+NT+++GL + G    A   ++ M      PD++T
Sbjct: 418 TGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYT 477

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++ +I+ LCK     E +     +     +     Y  +IN L        A +++ ++ 
Sbjct: 478 YSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMV 537

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +G  PDVVT +T +   C EG++D+A +++ +M+    +   + + TL+ G     +  
Sbjct: 538 SQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTD 597

Query: 557 KVVVLLHKMAA 567
           + V +L  M  
Sbjct: 598 RAVTILKHMTG 608



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 240/508 (47%), Gaps = 23/508 (4%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+  L+    +  + D  + LF+ +      PD++    L+  LC  G       +L ++
Sbjct: 201 SYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKM 256

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
               + P T  +  L++  C E +  EA ++  ++      P VVT   ++N  CR    
Sbjct: 257 KELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRM 316

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A+++FE M   F   C+P+V TYN+I+ G C  G V KA  LL QM++  + P+V+TY
Sbjct: 317 SGAVRVFESM--RFKG-CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTY 373

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N LI G C       A  L   M  NG+  D  T+N +I+  CK GK+D+   L + +  
Sbjct: 374 NLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEY 433

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           RG+ P++VT+N++++G C  G+   A     +M+S G   D Y+Y+  I   CK +  ++
Sbjct: 434 RGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQE 493

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
            +    EML + ++PS + Y  +++ LF   N G A ++  +M      PD  T+ T + 
Sbjct: 494 GLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVR 553

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
             C  G + EA  V   ++ C+  +    YN LI+G   +G+   A  +   +     +P
Sbjct: 554 AYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMP 613

Query: 503 DVVT----------CSTMIHWLCKEGQMDKANDL-----LLDMEAKNCVPSEV-TFCTLL 546
           +  T               H   K   + K  +L     L ++  KN VPS   T+ ++L
Sbjct: 614 NHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSIL 673

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
            GF +  +  +V  L+  M  E L +++
Sbjct: 674 EGFSEERRLDEVTSLVSLMKEENLPLNE 701



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 189/407 (46%), Gaps = 7/407 (1%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           F +L+    R   T + L+LF  M     A   P   TYN++I  LC+   +  A+  L 
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRH--APPAPTGATYNALIRALCRRADLRHAQRYLS 153

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M      P+  T+NSLI G+C     + A  LF +M   G   D V++ A+I   C+ G
Sbjct: 154 LMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAG 213

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++D+   L   M Q    PD  T+ +L+ G C  GR      +   M   G R    +Y 
Sbjct: 214 RIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYA 269

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L++  C++QK E+A  +  EM    + P V+T   +++   + G +  A+++ + M+  
Sbjct: 270 ALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFK 329

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
              P+ +T+   + G C  G V +A+ +   +R C  E  + TYN LI G C  G + +A
Sbjct: 330 GCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSA 389

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +L   ++  G   D  T + +I  LCK G++D+A  L   +E +   P+ VTF T++ G
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
             +  K       L  M +      D    S  ++ L K K  +E L
Sbjct: 450 LCKAGKFDVACTFLENMISAG-YAPDTYTYSPFIENLCKTKGSQEGL 495



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 215/489 (43%), Gaps = 22/489 (4%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  F+ M      P + ++  ++       +    ++L  ++   G+ PD+   NLLI 
Sbjct: 319 AVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIR 378

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C  G    AF +L  +  +    +  T+N LI+ LC  G++ EA  LF  L      P
Sbjct: 379 GQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP 438

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N VTFNT+INGLC+     VA    E M++   A   PD  TY+  I+ LCK     +  
Sbjct: 439 NSVTFNTVINGLCKAGKFDVACTFLENMIS---AGYAPDTYTYSPFIENLCKTKGSQEGL 495

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
             + +M  +++ P+ + Y  +I       ++  A  ++ +M+  G  PDVVT+   +   
Sbjct: 496 FFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAY 555

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C +G++D+   ++  M +     D + YN+L+DG   +G+  RA  +   M       + 
Sbjct: 556 CNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNH 615

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           +++ IL+    + +  E               P   T       +++   L D  +L + 
Sbjct: 616 FTFFILLRHLLQRRLAEHV-------------PLKAT------SVWKTIELADVFELFEL 656

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+ N V   + T+ + ++G  +   + E   +   ++     L  + YN L+N  CK+  
Sbjct: 657 MKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRM 716

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
              A  L   +   G +P+++    ++  L  EGQ D+A ++      K     E+ +  
Sbjct: 717 YSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKV 776

Query: 545 LLRGFVQNN 553
           ++ GF++  
Sbjct: 777 IIDGFIRKG 785



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 185/464 (39%), Gaps = 48/464 (10%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M +    P + ++ +L+     +    +   L + +  NGL  D +  N+LI
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLI 412

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G    A  +   +      PN+VTFN +INGLC  G+   A    + +      
Sbjct: 413 DALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYA 472

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---------------------------- 215
           P+  T++  I  LC+T+ +   L   +EM+ +                            
Sbjct: 473 PDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRI 532

Query: 216 FGAI----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           +G +    C PDVVTY + +   C +G +D+A+ ++ +MK      + + YN+LI G   
Sbjct: 533 WGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTS 592

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN----------------CKDGKMDKVNR 315
           +     A  +   M      P+  TF  ++ +                  K  ++  V  
Sbjct: 593 IGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFE 652

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L ELM +  V     TY S+++GF    R+     L   M  +    +   YN L+N  C
Sbjct: 653 LFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFC 712

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K +   DA  L   M+     P++I Y  LLSGL   G    A ++    +  +   D  
Sbjct: 713 KLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEI 772

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            +   IDG  + G       +   +   KC+   ETY  L   L
Sbjct: 773 VWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 6/324 (1%)

Query: 281 LFIEMMDNGV-QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
           LF  M  +    P   T+NA+I   C+   +    R L LM++ G  PD  T+NSL+ G+
Sbjct: 115 LFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGY 174

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C   ++  A +LF  M  +G   D  SY  LI   C+  ++++A+ L+REM     +P +
Sbjct: 175 CRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDM 230

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            T+  L+ GL   G   + L ++ KM+     P +  +A  +D  C+     EA ++   
Sbjct: 231 YTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNE 290

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           + +      + T   ++N  C+ GR+  A ++F  ++ KG  P+V T + ++   C  G+
Sbjct: 291 MFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGK 350

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           + KA  LL  M      P  VT+  L+RG   +        LL  M    L  +D    +
Sbjct: 351 VYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGL-AADQYTYN 409

Query: 580 KVVDLLSKDKKYRECLNQFRHLLF 603
            ++D L K  K  E  + F  L +
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEY 433


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/429 (32%), Positives = 221/429 (51%), Gaps = 17/429 (3%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V T+NTL+ GLC       A+++ +EM +       PDVVTYN++IDG  K     +  
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMES---LKLIPDVVTYNTLIDGCFKWRGSTEGF 192

Query: 245 ELLLQMKDRN-INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            LL +MK R  + PN +T+N ++  F       EA    ++M+++GV PD  T+N MIN 
Sbjct: 193 RLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMING 252

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK GK+ +  R+++ M ++G+ PD  T N+++   C+  +   A EL V    +G   D
Sbjct: 253 FCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILD 312

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y  LI    K ++ + A+ L+ EM    I PSV++YN L+ GL   G    A+  ++
Sbjct: 313 EVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLN 372

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           ++    +VPD  +    I G C  G V +A Q    +     +  I T N L+ GLC++ 
Sbjct: 373 ELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVD 432

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            L+ A KLF+    K    DVVT +TMI +LCKEG++D+A DL+ DME K   P + T+ 
Sbjct: 433 MLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYN 492

Query: 544 TLLRGFVQNNKKSKV------------VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
            ++R      +  +              V  H  + E    SD+  S ++ DL ++  KY
Sbjct: 493 AIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQG-KY 551

Query: 592 RECLNQFRH 600
           +E +  F+ 
Sbjct: 552 KEAMKLFQE 560



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 214/445 (48%), Gaps = 20/445 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNL 121
           +EA+   D M  +K  P + ++  L+    K +       L + + S  G+ P+    N+
Sbjct: 154 DEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNI 213

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           ++    K G  + A   + +++ S  +P+  T+N +ING C  G++ EA R+  ++    
Sbjct: 214 MVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKG 273

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P++ T NT+++ LC  +    A +L  +   + G I   D VTY ++I G  K    D
Sbjct: 274 LKPDICTLNTMLHTLCMEKKPEEAYELTVK-ARKRGYIL--DEVTYGTLIMGYFKGKQED 330

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           KA +L  +MK R I P+V++YN LI G C      +A     E+++ G+ PD V+ N +I
Sbjct: 331 KALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIII 390

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C +G +DK  +    M+     PD  T N L+ G C V  + +A +LF S +SK   
Sbjct: 391 HGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNS 450

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG-------- 413
            DV +YN +I+  CK+ ++++A  L  +M  ++  P   TYN ++  L   G        
Sbjct: 451 VDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKF 510

Query: 414 -----NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
                  G A+K  D  Q  D   D   ++  I  LC  G   EA+++FQ        L 
Sbjct: 511 MSKLSETGQAVKTHDTSQELDASSD-IMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLN 569

Query: 469 IETYNCLINGLCKMGRLKTACKLFH 493
             TY  L++G  K  R K+  K+ H
Sbjct: 570 KYTYIKLMDGFLK--RRKSISKVDH 592



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 208/458 (45%), Gaps = 17/458 (3%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D++  N L+  LC  G    A  V   +      P+ VT+N LI+G        E  RL 
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 175 KKLNVF-ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           +++      +PN VT N ++    +      A     +MV E G    PD  TYN++I+G
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMV-ESG--VSPDCFTYNTMING 252

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            CK G + +A  ++ +M  + + P++ T N+++   C     +EA  L ++    G   D
Sbjct: 253 FCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILD 312

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            VT+  +I    K  + DK  +L E M +RG+ P  V+YN L+ G CL G+  +A +   
Sbjct: 313 EVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLN 372

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            ++ KG   D  S NI+I+  C +  V+ A   + +M+    +P + T N LL GL +V 
Sbjct: 373 ELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVD 432

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L  A KL +         D  T+ T I  LCK G + EA  +   +   K E    TYN
Sbjct: 433 MLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYN 492

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDV------------VTCSTMIHWLCKEGQMD 521
            ++  L   GR + A K   +L   G                 +  S  I  LC +G+  
Sbjct: 493 AIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYK 552

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK-SKV 558
           +A  L  + E K    ++ T+  L+ GF++  K  SKV
Sbjct: 553 EAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRKSISKV 590


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 234/498 (46%), Gaps = 38/498 (7%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L+    K++ +   + +  ++   G+ P+   +++L   L + G     + + G ++R  
Sbjct: 224 LMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKG 283

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
             PN  TFN LI   C +G       L   +  F C+P+V ++N +IN  C    +  AL
Sbjct: 284 PCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYAL 343

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            L   M+ E G  CKP + T+ +IID  CK+G V+ A++   +++D  ++ N I YN +I
Sbjct: 344 HLLNLMI-ENG--CKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMI 400

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G+    D  +A  LF EM    + PD +TFN ++  + + GK +  NRLL  +   G+ 
Sbjct: 401 SGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLL 460

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            D+   +  + G C  GR   A +L  +++ KG    V ++N +I A       E A   
Sbjct: 461 HDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYA 520

Query: 387 YREMLSERIRPSVIT-----------------------------------YNTLLSGLFQ 411
           Y  M+   + PS  T                                   +  LL G F+
Sbjct: 521 YGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFR 580

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
           +G +  A  L ++M+   V PD+  FA +I+GLC +G + +A  VF  +           
Sbjct: 581 IGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFV 640

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN LI G CK+G+L  A KL   +  +G +PD+ T + +I  LCK+G+M  A +  +DM 
Sbjct: 641 YNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMC 700

Query: 532 AKNCVPSEVTFCTLLRGF 549
                P  VT+ TL+ G+
Sbjct: 701 RMGLSPDIVTYNTLIDGY 718



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 217/468 (46%), Gaps = 6/468 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+    A  +FD +  M  S     + I+++   K +       LF+ + +  + PD
Sbjct: 370 KEGNV--ELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPD 427

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
               N L+    + G       +L  +  S    ++   +  + GLC  GR  EA +L +
Sbjct: 428 GITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLE 487

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            L      P+VV FN++I           A   +  MV +FG    P   T +S++  L 
Sbjct: 488 NLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMV-KFG--LTPSSSTCSSLLISLV 544

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           + G +D+A   L  M D+      + +  L+ G+  +     A+ L+ EM   GV PD V
Sbjct: 545 RKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAV 604

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
            F A IN  C  G M     +   M+++G  P+   YNSL+ GFC VG+++ A +L   M
Sbjct: 605 AFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREM 664

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
             +G   D+++ N++I   CK  +++ A+  + +M    + P ++TYNTL+ G  +  ++
Sbjct: 665 NKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDV 724

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
           G A  L+ KM  +   PD  T+   I G C    +  AV + + + +        TYN +
Sbjct: 725 GGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTM 784

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           IN +C +  L  A  L  +L     +P+ VT + ++   CK+G  +KA
Sbjct: 785 INAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKA 831



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 182/382 (47%), Gaps = 5/382 (1%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           +YD  + L + L   G+ P +   N +I      G+   AF   G +++   TP++ T +
Sbjct: 478 RYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCS 537

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            L+  L  +G + EA      +         + F  L++G  R     +A  L+ EM   
Sbjct: 538 SLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMK-- 595

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            G    PD V + + I+GLC  G +  A ++   M  +   PN   YNSLI GFC V   
Sbjct: 596 -GRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKL 654

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            EA  L  EM   G+ PD+ T N +I   CK G+M         M + G++PD VTYN+L
Sbjct: 655 NEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTL 714

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +DG+C    +  A +L + M   G   D+ +YNI I+  C  +K+  AV +  E++S  I
Sbjct: 715 IDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGI 774

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P+ +TYNT+++ +  V  L  A+ L  K+     VP++ T    +   CK G   +A+ 
Sbjct: 775 VPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIF 833

Query: 456 VFQAIRNCKCELRIETYNCLIN 477
             Q +     +   ET + L+N
Sbjct: 834 WGQKLSEIHLDFD-ETTHKLMN 854



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 164/364 (45%), Gaps = 8/364 (2%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN----VITYNSLICGFCCVDD 274
           + + D    ++++    K     +A E+L +M++  + PN     I +  LI    C   
Sbjct: 213 VYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAV 272

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           WK    LF +++  G  P+  TFN +I   C+ G       LL +M +    PD  +YN 
Sbjct: 273 WK----LFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNI 328

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           +++  CL G+ S A  L   M+  GC+  + ++  +I+A CK+  VE A   + E+    
Sbjct: 329 VINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMG 388

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           +  + I YN ++SG  +  ++  A  L ++M+  D+VPD  TF T + G  + G   +  
Sbjct: 389 LSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGN 448

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           ++ + +            +  + GLC  GR   A KL   L  KG  P VV  +++I   
Sbjct: 449 RLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAY 508

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
              G  ++A      M      PS  T  +LL   V+     +  + L+ M  +   V++
Sbjct: 509 GNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTN 568

Query: 575 LSLS 578
           ++ +
Sbjct: 569 MAFT 572



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 130/346 (37%), Gaps = 70/346 (20%)

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           EA  +  +M + GV P+    + +     + G    V +L   ++++G  P+  T+N L+
Sbjct: 236 EALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLI 295

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
             FC  G       L   M    C  DVYSYNI+INAN          CL          
Sbjct: 296 LEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINAN----------CLK--------- 336

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
                           G    AL L++ M  N   P   TF T ID  CK G V  A + 
Sbjct: 337 ----------------GQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKY 380

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI--HW- 513
           F  I +         YN +I+G  K   +  A  LF  ++ K  +PD +T +T++  H+ 
Sbjct: 381 FDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYR 440

Query: 514 --------------------------------LCKEGQMDKANDLLLDMEAKNCVPSEVT 541
                                           LC  G+ D+A  LL ++  K   PS V 
Sbjct: 441 YGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVA 500

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
           F +++  +     + +       M    L  S  + SS ++ L+ K
Sbjct: 501 FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRK 546



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 4/246 (1%)

Query: 341 LVGRISRAREL-FVSMVSKGCRHDVYSYNIL---INANCKDQKVEDAVCLYREMLSERIR 396
           +V RI   R     + + +G R     Y++L   + A  K +   +A+ +  +M    + 
Sbjct: 191 VVARIGPGRSKNLAAFMWEGHRVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVT 250

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P+    + L   L + G+ G   KL   +      P++FTF   I   C+ G+      +
Sbjct: 251 PNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEAL 310

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
              +   +CE  + +YN +IN  C  G+   A  L + +   G  P + T  T+I   CK
Sbjct: 311 LHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCK 370

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           EG ++ A     ++E      + + +  ++ G+V+    S+  +L  +M  + +V   ++
Sbjct: 371 EGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGIT 430

Query: 577 LSSKVV 582
            ++ V 
Sbjct: 431 FNTLVA 436



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 4/117 (3%)

Query: 70  DCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           D M+KM  S   P +T++ I +      ++ +  V + + L S G+ P+    N +IN +
Sbjct: 729 DLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAV 788

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           C + I   A ++  ++L+  F PNTVT N L++  C +G   +A    +KL+    D
Sbjct: 789 CNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLD 844


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 235/467 (50%), Gaps = 7/467 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M K K + G  ++  ++  LAK       + +F+ + S    P L   N+LIN  C  G 
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 132 TSGAFVVLGRILRSC-FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
              A  +   + R     P+  T+N LI+GLC+ G    A +L  ++       NV T++
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           ++I  L +      + K+ EEM+    A C PDV  +N ++ G  +   ++KA+E+   M
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMM---AAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 177

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM--DNGVQPDVVTFNAMINYNCKDG 308
            +    P+ ++Y+ LI G   +    E+  +  EM     G  P+V+TF+ +I+  C+ G
Sbjct: 178 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +++K   +   M++ G  P+  TY +L+ G C   ++ +ARELF  M       D  +YN
Sbjct: 238 ELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYN 297

Query: 369 ILINANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
            LI   CK   +++A  LYREM     ++P+++T+NTL+ G  ++G LG A +L+ +M  
Sbjct: 298 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 357

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             +  D+ T+   I GL +   + EA++V++ +R  K  L   +    + GLCK G +  
Sbjct: 358 KGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQ 417

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           A  +F   +  G +P+  T   +   L K G+++ A  L+   +A++
Sbjct: 418 AYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 464



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 233/436 (53%), Gaps = 7/436 (1%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           + ++  L K G+ + A  V   +      P+ VT+N LIN  C  G   +A  LF+ +  
Sbjct: 14  DFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKR 73

Query: 180 FA-CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +P+  T+NTLI+GLC + NT  A KL  EM ++  A    +V TY+SII  L K+ 
Sbjct: 74  EKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIA---ANVFTYSSIIKSLVKEA 130

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
             +++ ++L +M     NP+V  +N ++ GF   ++ ++A+ ++  M+++G +PD V+++
Sbjct: 131 KPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH 190

Query: 299 AMINYNCKDGKMDKVNRLLELMIQR--GVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
            +I+   K GK+D+  ++L  M  R  G  P+ +T+++L+ G C  G + +A E+F SM+
Sbjct: 191 ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 250

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             GC+ + Y+Y  LI   C+ +KV  A  L+ +M    I P  + YN+L++G  + G++ 
Sbjct: 251 EAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD 310

Query: 417 DALKLIDKMQLN-DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
           +A KL  +M     + P   TF T IDG CK G +  A ++   +          TY  L
Sbjct: 311 EAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRIL 370

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I GL +  +L  A +++ +++ K  + D V+C + +  LCK G +D+A  +         
Sbjct: 371 IAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGA 430

Query: 536 VPSEVTFCTLLRGFVQ 551
           VP+  TF  L    ++
Sbjct: 431 VPNPETFRILSESLIK 446



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 209/393 (53%), Gaps = 7/393 (1%)

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            ++ ++  L +      AL++FE M +E    C P +VTYN +I+  C  G   KA +L 
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSES---CVPSLVTYNVLINSRCNAGEFGKALDLF 68

Query: 248 LQMK-DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
             MK ++ + P+  TYN+LI G C   + + A+ L  EM D  +  +V T++++I    K
Sbjct: 69  QSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVK 128

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           + K ++  ++LE M+  G NPD   +N +M GF     + +ARE++  MV  G + D  S
Sbjct: 129 EAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVS 188

Query: 367 YNILINANCKDQKVEDAVCLYREML--SERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           Y+ILI+   K  K+++++ +  EM   +    P+VIT++TL+ GL + G L  AL++   
Sbjct: 189 YHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGS 248

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M      P+ +T+ T I GLC+   V++A ++F+ +           YN LI G CK G 
Sbjct: 249 MLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGS 308

Query: 485 LKTACKLFHRLQ-HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +  A KL+  +    G  P +VT +T+I   CK G++ +AN+L+ +M  K       T+ 
Sbjct: 309 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYR 368

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
            L+ G  +  K  + + +  +M  +K ++  +S
Sbjct: 369 ILIAGLSRATKLDEALEVYKQMREKKFLLDPVS 401



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 211/434 (48%), Gaps = 36/434 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG-LFPDLFVLNLL 122
           +A+  F+ M      P + ++ +L+       ++   + LF+ +     + PD +  N L
Sbjct: 28  QALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTL 87

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC  G T GA  +L  +       N  T++ +I  L  E +  E+ ++ +++    C
Sbjct: 88  ISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGC 147

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE---------------FGAICK------ 221
           +P+V  FN ++ G  R+ N   A ++++ MV                    I K      
Sbjct: 148 NPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLK 207

Query: 222 -------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
                        P+V+T++++I GLC+ G ++KA E+   M +    PN  TY +LI G
Sbjct: 208 ILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAG 267

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL-ELMIQRGVNP 327
            C  +   +A+ LF +M    + PD V +N++I   CK G MD+  +L  E+    G+ P
Sbjct: 268 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 327

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             VT+N+L+DGFC +G++ RA EL   M +KG   D  +Y ILI    +  K+++A+ +Y
Sbjct: 328 TIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVY 387

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           ++M  ++     ++  + + GL + GN+  A  + +  + +  VP+  TF    + L K 
Sbjct: 388 KQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKL 447

Query: 448 GFVLEAVQVFQAIR 461
           G V +A ++ +  +
Sbjct: 448 GRVEDAQKLMEPAK 461



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 183/352 (51%), Gaps = 6/352 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +++ ++  L K  + +    + + + + G  PD+F  N ++    +      A  V   +
Sbjct: 118 TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 177

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD--PNVVTFNTLINGLCRTR 200
           + S + P+ V+++ LI+GL   G++ E+ ++  ++ + A    PNV+TF+TLI+GLCRT 
Sbjct: 178 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               AL++F  M+    A CKP+  TY ++I GLC+   V +A+EL  +M    I P+ +
Sbjct: 238 ELEKALEVFGSMLE---AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAV 294

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
            YNSLI G+C      EA+ L+ EM    G+QP +VTFN +I+  CK GK+ + N L+  
Sbjct: 295 AYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 354

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M  +G+  DT TY  L+ G     ++  A E++  M  K    D  S    +   CK   
Sbjct: 355 MGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGN 414

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           ++ A  ++         P+  T+  L   L ++G + DA KL++  +  D+ 
Sbjct: 415 IDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDIT 466


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/542 (26%), Positives = 253/542 (46%), Gaps = 43/542 (7%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAK----NKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           F+ +IK  P P + ++TI++    +    +        +  ++  +G  P++      I 
Sbjct: 194 FEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIK 253

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK+G+   A+ ++  + R     N   FN +I GLC  G + EA+ +FK++      P
Sbjct: 254 GLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILP 313

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V +++ LI+G CR      A ++F+EM N  G +  P++ +Y+ +IDG CK+G VDKA 
Sbjct: 314 DVYSYSILIDGFCRKGRVDQASEVFKEMRNS-GIL--PNIYSYSILIDGFCKEGRVDKAL 370

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E+  +MK+  I P+V +Y+ LI GFC   D   A   + EM  N   P    + ++I   
Sbjct: 371 EVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGY 430

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K  +     +   +M + G+ PDT+  N ++  +C     ++A  L       G   + 
Sbjct: 431 YKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNP 490

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS----------------G 408
           YSYN  I+  C+    E A+ L   ML   + P V+ Y+TL+S                 
Sbjct: 491 YSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIK 550

Query: 409 LFQVG-------------------NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           + +VG                    +  A +L   M+ + V PD   + + + G C  G 
Sbjct: 551 MTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGE 610

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           +  A  +F  +    C   + TY C IN   K+ +   A KL+ +++ +G  PD +  + 
Sbjct: 611 MTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTM 670

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKN-CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           +I   C  G+M++A  L  +M+ +  C P+ V +  L+  +++ NK+ +   L  +M A+
Sbjct: 671 LIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAK 730

Query: 569 KL 570
            L
Sbjct: 731 GL 732



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 249/538 (46%), Gaps = 43/538 (7%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F +L+ + A N   +    +F R   +G+  ++   N L+ CL +     G  ++   ++
Sbjct: 139 FDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLI 198

Query: 144 RSCFTPN----TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
           +    PN    T+  NF   G+     I  A+ +  K+ +    PNVVT+ T I GLC+ 
Sbjct: 199 KFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKV 258

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
               VA +L + +  +   +   +   +N++I GLC+ G +D+A E+  +MK+  I P+V
Sbjct: 259 GLFGVAWRLIQNLCRKNQPL---NNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDV 315

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
            +Y+ LI GFC      +A  +F EM ++G+ P++ +++ +I+  CK+G++DK   + E 
Sbjct: 316 YSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEE 375

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M   G+ PD  +Y+ L+DGFC  G +  A + +  M S       ++Y  LI    K ++
Sbjct: 376 MKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQ 435

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN----------- 428
             +A+  +R M    + P  I  N +LS   +  +   AL L +K Q N           
Sbjct: 436 FANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNE 495

Query: 429 ------------------------DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
                                   +V+PD   ++T I    K     +AV +F  +    
Sbjct: 496 FIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVG 555

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               ++TY  LIN      ++  A +LF  ++     PD +  ++++   C  G+M +A 
Sbjct: 556 ITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRAR 615

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
            L  +M  + C P+ VT+   +  +++ NK ++   L  KM  E+ V  D  L + ++
Sbjct: 616 ALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKM-KERGVYPDQILYTMLI 672



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 221/466 (47%), Gaps = 1/466 (0%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V ++LI       +   A  V  R        N ++ NFL+  L  + R+     LF+ L
Sbjct: 138 VFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVL 197

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-FGAICKPDVVTYNSIIDGLCK 236
             F   PN+ T+  ++N  CR     V ++   E++ + + +   P+VVTY + I GLCK
Sbjct: 198 IKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCK 257

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G    A  L+  +  +N   N   +N++I G C      EA  +F EM ++G+ PDV +
Sbjct: 258 VGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYS 317

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           ++ +I+  C+ G++D+ + + + M   G+ P+  +Y+ L+DGFC  GR+ +A E+F  M 
Sbjct: 318 YSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMK 377

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           + G   DVYSY+ILI+  C+   ++ A+  + EM S    PS   Y +L+ G ++     
Sbjct: 378 NSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFA 437

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +ALK    MQ   + PD+      +   C+     +A+ + +  +         +YN  I
Sbjct: 438 NALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFI 497

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           + +C+    + A +L   +  +  +PDVV  ST+I    K    +KA  L + M      
Sbjct: 498 HRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGIT 557

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
            +  T+  L+  F+ + K      L   M   ++    ++ +S V 
Sbjct: 558 FNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVA 603



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 164/333 (49%), Gaps = 12/333 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ F++ M     SP   ++  L+    K+KQ+   +  F+ +   G++PD    N +
Sbjct: 402 DSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHI 461

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA----RLFKKLN 178
           ++  C+    + A  +  +   +    N  ++N  I+ +C  G + E A     +  K N
Sbjct: 462 LSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRIC-RGSVPEKALQLLPVMLKRN 520

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
           V    P+VV ++TLI+   +  N+  A+ LF +M  + G     +V TY  +I+    D 
Sbjct: 521 VL---PDVVNYSTLISCFAKRLNSEKAVMLFIKMT-KVGITF--NVKTYTILINLFISDC 574

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +D A  L   MK+  + P+ I Y SL+ GFC   +   A+ LF EM   G  P+VVT+ 
Sbjct: 575 KMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYT 634

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
             IN   K  K ++ ++L E M +RGV PD + Y  L+  FC  G ++RA  LF  M  +
Sbjct: 635 CFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQE 694

Query: 359 G-CRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           G C  +V  Y  LIN+  K  K + A  LY EM
Sbjct: 695 GRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEM 727



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 4/230 (1%)

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
           + PD+   + LI+C  K   +  A ++  ++ +   T N  T+  LIN   ++ ++  A 
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAY 580

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
           RLFK +      P+ + + +L+ G C T     A  LF+EM  E    C P+VVTY   I
Sbjct: 581 RLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREG---CSPNVVTYTCFI 637

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-V 290
           +   K    ++A +L  +MK+R + P+ I Y  LI  FC   +   A+ LF EM   G  
Sbjct: 638 NEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRC 697

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            P+VV +  +IN   K  K D+  +L E M  +G++    +  S+ + +C
Sbjct: 698 TPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWC 747



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 2/212 (0%)

Query: 60  ITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
           + S +AV  F  M K+  +  + ++TIL+ +   + + D    LFK +  + ++PD    
Sbjct: 539 LNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAY 598

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
             L+   C  G  + A  +   + R   +PN VT+   IN      +  +A +L++K+  
Sbjct: 599 TSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKE 658

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+ + +  LI   C T     A  LF+EM  E    C P+VV Y  +I+   K   
Sbjct: 659 RGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQE--GRCTPNVVMYTCLINSYIKLNK 716

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
            D+A++L  +M+ + ++    +  S+   +CC
Sbjct: 717 RDQAEKLYEEMRAKGLSRLCSSEGSVSESWCC 748


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 267/541 (49%), Gaps = 26/541 (4%)

Query: 64  EAVYFFDCMIK-MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL---NSNGLFPDLFVL 119
           EAV FF  M   +     + SF  +L ++ +   +      +  +   NS G  P+L   
Sbjct: 142 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTY 201

Query: 120 NLLINCLCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           NL+I  LCK+G    A      + L++C  P+  T++ L+NGLC E R+ EA  L  ++ 
Sbjct: 202 NLIIKALCKLGQIDRAVDTFREMPLKNC-NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 260

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C PN VTFN LI+ L +  +   A KL + M   F   C P+ VTYN++I GLC  G
Sbjct: 261 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNM---FLKGCVPNEVTYNTLIHGLCLKG 317

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +DKA  LL +M      PN +TY ++I G       ++   + + M + G + +   ++
Sbjct: 318 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 377

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++I+   K+GK +   RL + M ++G  P+ V Y + +DG C   +   A ++   M+SK
Sbjct: 378 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 437

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   + ++Y+ L+    K    + A+ +++EM+S+ +R +V+  + LL+GL + G L +A
Sbjct: 438 GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREA 497

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR--NCKCELRIETYNCLI 476
           L +   M    + PD   +++ I GLC  G V + +++F  ++    K    + TYN L 
Sbjct: 498 LTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILF 557

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           N LC+   L  A  L + +  +G  PD +TC+  +  L +     +   L LD       
Sbjct: 558 NALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLD------- 610

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
                   L+   ++  +K   + ++ +M   + +  + S  S+V+    K K+ RE ++
Sbjct: 611 -------ELVVRLLKRERKLSALRIVEEMLL-RFLPPEPSTWSRVIQRTCKPKRIRETID 662

Query: 597 Q 597
           +
Sbjct: 663 E 663



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 246/497 (49%), Gaps = 13/497 (2%)

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
           G  +F  L+   A ++++  +  +  R+   G      +  L+     K  +   A    
Sbjct: 88  GDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFF 147

Query: 140 GRILRSCFTPNTV-TFNFLINGLCAEGRIMEAARLFKKLNVFACD-----PNVVTFNTLI 193
            R+        TV +FN ++N +  EG    A + +  L+VF  +     PN++T+N +I
Sbjct: 148 HRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFY--LHVFGANSKGFQPNLLTYNLII 205

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
             LC+      A+  F EM  +    C PDV TY+++++GLCK+  VD+A  LL +M+  
Sbjct: 206 KALCKLGQIDRAVDTFREMPLKN---CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 262

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
              PN +T+N LI       D   A  L   M   G  P+ VT+N +I+  C  GK+DK 
Sbjct: 263 GCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 322

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             LLE M+     P+ VTY ++++G     R      + +SM  +G + + Y Y+ LI+ 
Sbjct: 323 LSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISG 382

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             K+ K E+AV L++EM  +  +P+V+ Y   + GL +     +A  ++ +M     +P+
Sbjct: 383 LFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPN 442

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           +FT+++ + G  K G   +A+ V++ + +      +   + L+NGLC+ GRL+ A  ++ 
Sbjct: 443 AFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWT 502

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN--CVPSEVTFCTLLRGFVQ 551
            +  +G  PDVV  S+MI  LC  G +DK   L  +M+ +     P  VT+  L     +
Sbjct: 503 HMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCR 562

Query: 552 NNKKSKVVVLLHKMAAE 568
            +  ++ + LL+ M  E
Sbjct: 563 QDNLTRAIDLLNSMLDE 579



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 221/435 (50%), Gaps = 15/435 (3%)

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIM-EAARLFKKL-NVFACDPNVVTFNTLINGLC 197
           GR+L       T T   LI   C +  +  EA   F ++ N   C   V +FN+++N + 
Sbjct: 119 GRVL-------TETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVII 171

Query: 198 RTRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           +  +   A K +   ++ FGA  K   P+++TYN II  LCK G +D+A +   +M  +N
Sbjct: 172 QEGDFSYAFKFY---LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN 228

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
            NP+V TY++L+ G C      EA  L  EM   G  P+ VTFN +I+   K+G + +  
Sbjct: 229 CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAA 288

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           +L++ M  +G  P+ VTYN+L+ G CL G++ +A  L   MVS  C  +  +Y  +IN  
Sbjct: 289 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGL 348

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K ++ ED V +   M     + +   Y++L+SGLF+ G   +A++L  +M      P+ 
Sbjct: 349 VKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNV 408

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             +  +IDGLC++    EA  + Q + +        TY+ L+ G  K G  + A  ++  
Sbjct: 409 VVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKE 468

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  +    +VV CS +++ LC+ G++ +A  +   M  +   P  V + ++++G      
Sbjct: 469 MMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS 528

Query: 555 KSKVVVLLHKMAAEK 569
             K + L ++M  ++
Sbjct: 529 VDKGLKLFYEMQCQE 543



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 202/415 (48%), Gaps = 26/415 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV+  D M      P   +F +L+  L+KN        L   +   G  P+    N L
Sbjct: 250 DEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTL 309

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC  G    A  +L +++ S   PN VT+  +INGL  + R  +   +   +     
Sbjct: 310 IHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 369

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N   +++LI+GL +   +  A++L++EM  +    CKP+VV Y + IDGLC+D   D+
Sbjct: 370 KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG---CKPNVVVYGAFIDGLCRDEKPDE 426

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+++L +M  +   PN  TY+SL+ GF    D ++A  ++ EMM   ++ +VV  + ++N
Sbjct: 427 AEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLN 486

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM--VSKGC 360
             C+ G++ +   +   M+  G+ PD V Y+S++ G C VG + +  +LF  M       
Sbjct: 487 GLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKS 546

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF------QVGN 414
           R DV +YNIL NA C+   +  A+ L   ML E   P  +T N  L  L       Q G 
Sbjct: 547 RPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGR 606

Query: 415 LG---------------DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           L                 AL+++++M L  + P+  T++  I   CK   + E +
Sbjct: 607 LFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 661



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 197/398 (49%), Gaps = 35/398 (8%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A+  F  M N+    CK  V ++NS+++ + ++G    A +  L         +V   NS
Sbjct: 143 AVNFFHRMANDLH--CKQTVKSFNSVLNVIIQEGDFSYAFKFYL---------HVFGANS 191

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
                                   G QP+++T+N +I   CK G++D+       M  + 
Sbjct: 192 -----------------------KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN 228

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
            NPD  TY++LM+G C   R+  A  L   M ++GC  +  ++N+LI+A  K+  +  A 
Sbjct: 229 CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAA 288

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L   M  +   P+ +TYNTL+ GL   G L  AL L++KM  +  VP+  T+ T I+GL
Sbjct: 289 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGL 348

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K     + V +  ++     +     Y+ LI+GL K G+ + A +L+  +  KG  P+V
Sbjct: 349 VKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNV 408

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           V     I  LC++ + D+A D+L +M +K  +P+  T+ +L++GF +     K +++  +
Sbjct: 409 VVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKE 468

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           M ++ +   ++   S +++ L +  + RE L  + H+L
Sbjct: 469 MMSQDM-RHNVVCCSVLLNGLCESGRLREALTVWTHML 505



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 21/287 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S  AV  +  M +    P +  +   +  L ++++ D    + + + S G  P+ F  + 
Sbjct: 389 SENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 448

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+    K G +  A +V   ++      N V  + L+NGLC  GR+ EA  ++  +    
Sbjct: 449 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEG 508

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+VV ++++I GLC   +    LKLF EM  +     +PDVVTYN + + LC+   + 
Sbjct: 509 LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ-EPKSRPDVVTYNILFNALCRQDNLT 567

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV---VTFN 298
           +A +LL  M D   +P+ +T N                 +F+E +   + P     +  +
Sbjct: 568 RAIDLLNSMLDEGCDPDSLTCN-----------------IFLETLRERINPPQDGRLFLD 610

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
            ++    K  +     R++E M+ R + P+  T++ ++   C   RI
Sbjct: 611 ELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRI 657


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 252/532 (47%), Gaps = 39/532 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP +  FT  +    K  + +  V LF ++   G+ P++   N +I+ L   G    AF+
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
              +++     P  +T++ L+ GL    RI +A  + K++      PNV+ +N LI+   
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
              +   A+++ + MV++  ++      TYN++I G CK+G  D A+ LL +M     N 
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N  ++ S+IC  C    +  A     EM+   + P       +I+  CK GK  K   L 
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
              + +G   DT T N+L+ G C  G++  A  +   ++ +GC  D  SYN LI+  C  
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           +K+++A     EM+   ++P   TY+ L+ GLF +  + +A++  D  + N ++PD +T+
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           +  IDG CK     E  + F  + +   +     YN LI   C+ GRL  A +L   ++H
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673

Query: 498 KGPIPDVVTCSTMI-----------------------------HWLC------KEGQMDK 522
           KG  P+  T +++I                             H+        K GQM K
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
              LL +M +KN  P+++T+  ++ G+ ++   ++   LL++M  EK +V D
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM-REKGIVPD 784



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 242/491 (49%), Gaps = 3/491 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA  F + M++    P + +++IL+  L + K+      + K +   G  P++ V N L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   + G  + A  +   ++    +  + T+N LI G C  G+   A RL K++     
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + N  +F ++I  LC       AL+   EM+    +   P      ++I GLCK G   K
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS---PGGGLLTTLISGLCKHGKHSK 488

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL  Q  ++    +  T N+L+ G C      EA  +  E++  G   D V++N +I+
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   K+D+    L+ M++RG+ PD  TY+ L+ G   + ++  A + +      G   
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DVY+Y+++I+  CK ++ E+    + EM+S+ ++P+ + YN L+    + G L  AL+L 
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M+   + P+S T+ + I G+     V EA  +F+ +R    E  +  Y  LI+G  K+
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G++     L   +  K   P+ +T + MI    ++G + +A+ LL +M  K  VP  +T+
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788

Query: 543 CTLLRGFVQNN 553
              + G+++  
Sbjct: 789 KEFIYGYLKQG 799



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 207/395 (52%), Gaps = 6/395 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           SFT ++ +L  +  +D+ +     +    + P   +L  LI+ LCK G  S A  +  + 
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L   F  +T T N L++GLC  G++ EA R+ K++    C  + V++NTLI+G C  +  
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A    +EMV       KPD  TY+ +I GL     V++A +     K   + P+V TY
Sbjct: 557 DEAFMFLDEMVKRG---LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + +I G C  +  +E +  F EMM   VQP+ V +N +I   C+ G++     L E M  
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +G++P++ TY SL+ G  ++ R+  A+ LF  M  +G   +V+ Y  LI+   K  ++  
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
             CL REM S+ + P+ ITY  ++ G  + GN+ +A +L+++M+   +VPDS T+  +I 
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           G  K G VLEA   F+          IE +N LI 
Sbjct: 794 GYLKQGGVLEA---FKGSDEENYAAIIEGWNKLIQ 825



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 195/379 (51%), Gaps = 10/379 (2%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFV 240
           P+  T N L+  L R          F++    F  +CK   PDV  + + I+  CK G V
Sbjct: 224 PSKTTCNILLTSLVRANE-------FQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 276

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           ++A +L  +M++  + PNV+T+N++I G      + EA     +M++ G++P ++T++ +
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +    +  ++     +L+ M ++G  P+ + YN+L+D F   G +++A E+   MVSKG 
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
                +YN LI   CK+ + ++A  L +EMLS     +  ++ +++  L        AL+
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
            + +M L ++ P      T I GLCK+G   +A++++    N    +   T N L++GLC
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G+L  A ++   +  +G + D V+ +T+I   C + ++D+A   L +M  +   P   
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576

Query: 541 TFCTLLRGFVQNNKKSKVV 559
           T+  L+ G    NK  + +
Sbjct: 577 TYSILICGLFNMNKVEEAI 595



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 176/375 (46%), Gaps = 36/375 (9%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           + ++ + P+  T N L+      +++++  C   +++  GV PDV  F   IN  CK GK
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKC-CEAFDVVCKGVSPDVYLFTTAINAFCKGGK 275

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +++  +L   M + GV P+ VT+N+++DG  + GR   A      MV +G    + +Y+I
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L+    + +++ DA  + +EM  +   P+VI YN L+    + G+L  A+++ D M    
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC--------------- 474
           +   S T+ T I G CKNG    A ++ + + +    +   ++                 
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455

Query: 475 --------------------LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
                               LI+GLCK G+   A +L+ +  +KG + D  T + ++H L
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C+ G++D+A  +  ++  + CV   V++ TL+ G     K  +  + L +M    L   +
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575

Query: 575 LSLSSKVVDLLSKDK 589
            + S  +  L + +K
Sbjct: 576 YTYSILICGLFNMNK 590



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 13/159 (8%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP   ++T L+  ++   + +    LF+ +   GL P++F    LI+   K+G       
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +      PN +T+  +I G   +G + EA+RL  ++      P+ +T+   I G  
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 796

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +    L A K               D   Y +II+G  K
Sbjct: 797 KQGGVLEAFK-------------GSDEENYAAIIEGWNK 822


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 271/566 (47%), Gaps = 35/566 (6%)

Query: 24  CSFGRPPNPKT-DLSSHHFKDGTSIAKFLND-------RHKSGNITSNEAVYFFDCMIKM 75
           CS G  P P T +L+   + +  S    LN        R   G     +A      M+  
Sbjct: 424 CSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGN 483

Query: 76  KPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA 135
              P  ++++ ++  L    + +    LFK +   G+ PD++   +LI+C  K GI   A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
              L  ++R    P  VT+  LI+      ++  A  LF+ +    C PNV+T+  LI+G
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603

Query: 196 LCRTRNTLVALKLFEEM--------VNEFGAIC-----KPDVVTYNSIIDGLCKDGFVDK 242
            C++ N   A +++  M        V+ +  I      KP+VVTY +++DGLCK   V  
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A++LL  M      PN I Y++LI GFC      EA+ +F +M+++G  P+V T++++I+
Sbjct: 664 ARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLID 723

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              KD ++D V ++L  M++    P+ V Y  ++DG   V +   A +L + M  KGC+ 
Sbjct: 724 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 783

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V +Y  +I+   K  KV+  + L+REM S+   P+ +TY  L++     G+L +A  L+
Sbjct: 784 NVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 843

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+         ++   I+G  K  F+L    + +  +N    + I  Y  LI+   K 
Sbjct: 844 EEMKQTYWPKHVSSYCKVIEGY-KREFILSLGLLEEVEKNGSAPI-ILLYKVLIDNFVKA 901

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCS-------TMIHWLCKEGQMDKANDLLLDMEAKNC 535
           GRL+ A +L     HK  I   ++ +       ++I+      ++  A +L  DM     
Sbjct: 902 GRLEVALEL-----HKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGV 956

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVL 561
           +P   TF  LL G ++  +  + + L
Sbjct: 957 IPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 157/583 (26%), Positives = 258/583 (44%), Gaps = 70/583 (12%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  L+ +  +  + DT   + + ++  GL  D F L      LCK+G    A   
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA--- 295

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT---------- 188
           L  I +  F PNT+ +N +I+GLC      EA     ++   +C PNV T          
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355

Query: 189 -------------------------FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
                                    FN+L++  C++ +   A KL ++M       CKP 
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEK---CECKPG 412

Query: 224 VVTYNSIIDGLCKDG---------FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
            V YN +I  +C  G           +KA   +L         NV+++   +CGF     
Sbjct: 413 YVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GK 469

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           +++A  +  EMM NG  PD  T++ +I + C   +++    L + M   GV PD  TY  
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           L+D F   G I +A      MV  GC   V +Y  LI+A  K +KV  A  L+  M+++ 
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD----------------SFTFA 438
             P+VITY  L+ G  + GN+  A ++  +M+ +  +PD                  T+ 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +DGLCK   V +A  + + +    CE     Y+ LI+G CK  +L  A ++FH++   
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEH 709

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P+V T S++I  L K+ ++D    +L  M   +C P+ V +  ++ G  +  K  + 
Sbjct: 710 GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEA 769

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             L+  M  EK    ++   + ++D   K  K  +CL  FR +
Sbjct: 770 YKLM-LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 240/525 (45%), Gaps = 25/525 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA+ F + M      P + ++ ILL      KQ      +   + + G +P   + N L
Sbjct: 325 EEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSL 384

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME------AARLFKK 176
           ++  CK    S A+ +L ++ +    P  V +N LI  +C+ G +        A + + +
Sbjct: 385 VHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNE 444

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +       N V   +    LC       A K+  EM+   G    PD  TY+ +I  LC 
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMM---GNGFVPDTSTYSEVIGFLCN 501

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              V+ A  L  +MK   + P+V TY  LI  F      K+A     EM+ +G +P VVT
Sbjct: 502 ASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVT 561

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +I+   K  K+   N L ELMI +G  P+ +TY +L+DG+C  G I +A +++  M 
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621

Query: 357 SKG----------------CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                               + +V +Y  L++  CK  KV+DA  L   M  +   P+ I
Sbjct: 622 GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTI 681

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y+ L+ G  +   L +A ++  KM  +   P+ +T+++ ID L K+  +   ++V   +
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
               C   I  Y  +I+GL K+ +   A KL   ++ KG  P+VVT + MI    K G++
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           DK  +L  +M +K C P+ VT+  L+          +   LL +M
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 228/532 (42%), Gaps = 68/532 (12%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +LN+LI   C+ G+ + A   LGR+    + P  +T+N L+       ++  A  + +++
Sbjct: 208 LLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREM 267

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           +      +  T       LC+      AL L E+   +F     P+ + YN +I GLC+ 
Sbjct: 268 SELGLSMDEFTLGFFAQALCKVGKWREALSLIEK--EDF----VPNTILYNKMISGLCEA 321

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC--LFIEMMDNGVQPDVV 295
            F ++A + L +M+  +  PNV TY  L+CG  C++  +  +C  +   M+  G  P   
Sbjct: 322 SFFEEAMDFLNRMRSTSCIPNVQTYRILLCG--CLNKKQLGRCKRILSMMIAEGCYPSYT 379

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL-------------- 341
            FN++++  CK        +LL+ M +    P  V YN L+   C               
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439

Query: 342 ---------------------------VGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
                                       G+  +A ++   M+  G   D  +Y+ +I   
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   +VE+A  L++EM    + P V TY  L+    + G +  A   +D+M  +   P  
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+ T I    K   V  A ++F+ +    C   + TY  LI+G CK G ++ AC+++ R
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619

Query: 495 LQHKGPIPD----------------VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           ++    IPD                VVT   ++  LCK  ++  A DLL  M    C P+
Sbjct: 620 MRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPN 679

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            + +  L+ GF +  K  +   + HKM  E     ++   S ++D L KDK+
Sbjct: 680 TIVYDALIDGFCKAAKLDEAQEVFHKM-VEHGYNPNVYTYSSLIDRLFKDKR 730



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 138/304 (45%), Gaps = 11/304 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M++   +P + +++ L+  L K+K+ D V+ +  ++  N   P++ +   +
Sbjct: 697 DEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEM 756

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K+  T  A+ ++  +      PN VT+  +I+G    G++ +   LF+++    C
Sbjct: 757 IDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC 816

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VT+  LIN  C T +   A  L EEM   +       V +Y  +I+G  ++  +  
Sbjct: 817 APNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWP---KHVSSYCKVIEGYKREFILSL 873

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT--FNAM 300
              LL +++     P ++ Y  LI  F      + A  L  E++   +        + ++
Sbjct: 874 G--LLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSL 931

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I       K+     L   MI+ GV PD  T+  L+ G   V R   A +L  S+    C
Sbjct: 932 IYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL----C 987

Query: 361 RHDV 364
           + D+
Sbjct: 988 QMDI 991


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 249/492 (50%), Gaps = 3/492 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++  +L    K  ++   + + + +  + +  D++  N++I+ LC++  ++ AF++L R+
Sbjct: 262 TYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRM 321

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
            +   TP+  T+N LING   EG+I  A  +F  +      P+V T+ T+I+G CR R  
Sbjct: 322 RKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRI 381

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             AL +  EM  +   +  P  +TY+++++G CK   +  A  L+  +K R I  N    
Sbjct: 382 DKALSILSEM--QITGVM-PSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMR 438

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
             LI GFC V +  +AK +   M ++G+ PDV+T++A+IN  C+  KM +   +L  M +
Sbjct: 439 TILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQK 498

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G+ P+ V Y +L+  +C  G +  A + FV +  +G   +   +N L++A  ++  + +
Sbjct: 499 SGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITE 558

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A    + M    I    +++N ++      GN+  A  + D M      P+  T+   + 
Sbjct: 559 AEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLR 618

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLC+ G +++A Q    + +    +  +T+N L+ G+C+ G L  A  L  ++     +P
Sbjct: 619 GLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLP 678

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           D+ T + ++   C++G++  A  +L  M  K  VP  V +  LL G +   +      + 
Sbjct: 679 DIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVF 738

Query: 563 HKMAAEKLVVSD 574
           H++  ++ + +D
Sbjct: 739 HEIICKEGLYAD 750



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 260/557 (46%), Gaps = 40/557 (7%)

Query: 79   PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
            P + +++ L+  + +  +      +  R+  +G+ P+  +   LI   CK G    A   
Sbjct: 468  PDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKH 527

Query: 139  LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
               I R     N V  N L++    EG I EA    + ++      + V+FN +I+  C 
Sbjct: 528  FVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCH 587

Query: 199  TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
              N + A  ++++MV  +G    P+V TY +++ GLC+ G + +A++ +  + D     +
Sbjct: 588  RGNIVGAFSVYDDMV-RYGY--SPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAID 644

Query: 259  VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              T+N+L+ G C      EA  L  +M+ N   PD+ T+  +++  C+ GK+     +L+
Sbjct: 645  EKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQ 704

Query: 319  LMIQRGVNPDTVTY------------------------------------NSLMDGFCLV 342
            +M+++GV PDTV Y                                    NSLM+G+   
Sbjct: 705  MMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKS 764

Query: 343  GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
              ++  + +   M       +  SYNIL++   K  +   ++ LY+ M+ + IRP  +TY
Sbjct: 765  RNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTY 824

Query: 403  NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
              L+ GL + G +  A+K ++KM L  + PD   F   I    +   +  A+QVF  ++ 
Sbjct: 825  RLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKW 884

Query: 463  CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                   +T++ +INGL + G L  + K+ H +   G  P+      +++  C+ G++D+
Sbjct: 885  LHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDR 944

Query: 523  ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
            A  L  +M+A   VP+EV   +++RG  +  K  + V++   M    +V +  + ++ ++
Sbjct: 945  AFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTT-LM 1003

Query: 583  DLLSKDKKYRECLNQFR 599
              L K+ K  + L+  R
Sbjct: 1004 HSLCKESKIADALHLKR 1020



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 244/487 (50%), Gaps = 9/487 (1%)

Query: 115  DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
            D    N +I+  C  G   GAF V   ++R  ++PN  T+  L+ GLC  G +++A +  
Sbjct: 574  DSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFM 633

Query: 175  K-KLNV-FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
               L++ FA D    TFN L+ G+CR      AL L E+M+      C PD+ TY  ++ 
Sbjct: 634  SCLLDIPFAIDEK--TFNALLLGICRYGTLDEALDLCEKMIKNN---CLPDIHTYTILLS 688

Query: 233  GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM-DNGVQ 291
            G C+ G +  A  +L  M ++ + P+ + Y  L+ G       K A  +F E++   G+ 
Sbjct: 689  GFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLY 748

Query: 292  PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
             D + +N+++N   K   ++ + R++  M Q  V P++ +YN LM G+   G+ S++  L
Sbjct: 749  ADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYL 808

Query: 352  FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
            +  MV KG R D  +Y +LI    +   ++ AV    +M+ E I P  + ++ L++   +
Sbjct: 809  YKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSE 868

Query: 412  VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
               + +AL++ + M+   + P S TF+  I+GL + G++  + +V   +     +     
Sbjct: 869  KSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTH 928

Query: 472  YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
            Y  L+N  C++G +  A +L   ++  G +P  V  S++I  LC+ G++++A  +   M 
Sbjct: 929  YIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMM 988

Query: 532  AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
                VP+  TF TL+    + +K +  + L   M   +L V  +S +  +   L KDK  
Sbjct: 989  RSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITG-LCKDKHI 1047

Query: 592  RECLNQF 598
             + L+ +
Sbjct: 1048 SDALDLY 1054



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 241/523 (46%), Gaps = 8/523 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            +N   + G I  N A Y F+ M++    P + ++T ++    +N++ D  +S+   +  
Sbjct: 336 LINGFFREGKI--NHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQI 393

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ P     + L+N  CK+ +   A  ++  +     T N      LI+G C  G I +
Sbjct: 394 TGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISK 453

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A ++ K +     DP+V+T++ LING+CR        ++   M  + G +  P+ V Y +
Sbjct: 454 AKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRM-QKSGIL--PNDVLYTT 510

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I   CK G+V +A +  + +  R +  N + +N+L+  F       EA+     M    
Sbjct: 511 LICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMN 570

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           +  D V+FN +I+  C  G +     + + M++ G +P+  TY +L+ G C  G + +AR
Sbjct: 571 ISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQAR 630

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +    ++      D  ++N L+   C+   +++A+ L  +M+     P + TY  LLSG 
Sbjct: 631 QFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGF 690

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            + G +  AL ++  M    VVPD+  +   ++GL   G V  A  VF  I  CK  L  
Sbjct: 691 CRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEI-ICKEGLYA 749

Query: 470 E--TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           +   YN L+NG  K   + T  ++   +      P+  + + ++H   K GQ  K+  L 
Sbjct: 750 DCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLY 809

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             M  K   P  VT+  L+ G  +       V  L KM  E +
Sbjct: 810 KYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGI 852



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 236/480 (49%), Gaps = 12/480 (2%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            +A  F  C++ +  +    +F  LL  + +    D  + L +++  N   PD+    +L+
Sbjct: 628  QARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILL 687

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----NV 179
            +  C+ G    A V+L  +L     P+TV +  L+NGL  EG++  A+ +F ++     +
Sbjct: 688  SGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGL 747

Query: 180  FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDG 238
            +A   + + +N+L+NG  ++RN     ++  +M  NE      P+  +YN ++ G  K G
Sbjct: 748  YA---DCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEV----YPNSASYNILMHGYVKRG 800

Query: 239  FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
               K+  L   M  + I P+ +TY  LI G         A     +M+  G+ PD + F+
Sbjct: 801  QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFD 860

Query: 299  AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
             +I    +  KM    ++   M    ++P + T++++++G    G +  + ++   M+  
Sbjct: 861  ILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQV 920

Query: 359  GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
            G + +   Y  L+NA C+  +++ A  L  EM +  I P+ +  ++++ GL + G L +A
Sbjct: 921  GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEA 980

Query: 419  LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            + +   M  + +VP   TF T +  LCK   + +A+ + + +  C+  + + +YN LI G
Sbjct: 981  VIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITG 1040

Query: 479  LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            LCK   +  A  L+  ++ KG  P++ T  T+   +   G++    +LL D+E +  +P+
Sbjct: 1041 LCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPA 1100



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 234/505 (46%), Gaps = 4/505 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S  A      M K   +P   ++  L+    +  + +    +F  +    L P +     
Sbjct: 311 STRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTT 370

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I+  C+      A  +L  +  +   P+ +T++ L+NG C    +  A  L + L    
Sbjct: 371 MIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRG 430

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              N      LI+G C+      A ++ + M   F     PDV+TY+++I+G+C+   + 
Sbjct: 431 ITINKTMRTILIDGFCQVGEISKAKQILKSM---FEDGIDPDVITYSALINGMCRMAKMH 487

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           + KE+L +M+   I PN + Y +LIC +C     KEA   F+++   G+  + V  NA++
Sbjct: 488 ETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALL 547

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   ++G + +     + M +  ++ D+V++N ++D +C  G I  A  ++  MV  G  
Sbjct: 548 HAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYS 607

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +V +Y  L+   C+   +  A      +L         T+N LL G+ + G L +AL L
Sbjct: 608 PNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDL 667

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            +KM  N+ +PD  T+   + G C+ G +L A+ + Q +           Y CL+NGL  
Sbjct: 668 CEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLIN 727

Query: 482 MGRLKTACKLFHRLQHK-GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
            G++K A  +FH +  K G   D +  +++++   K   ++    ++ DM      P+  
Sbjct: 728 EGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSA 787

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
           ++  L+ G+V+  + SK + L   M
Sbjct: 788 SYNILMHGYVKRGQFSKSLYLYKYM 812



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 235/526 (44%), Gaps = 77/526 (14%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N ++N L + G +   ++ L   L   F     T N L+N LC  G   +A  + +K+  
Sbjct: 195 NTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMK- 253

Query: 180 FACD-PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
            +C   N VT+NT+++   +      AL + E+M  +     + DV TYN +ID LC+  
Sbjct: 254 -SCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDS---VQADVYTYNIMIDKLCRIK 309

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
              +A  LL +M+  ++ P+  TYN+LI GF        A+ +F  M+   + P V T+ 
Sbjct: 310 RSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYT 369

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            MI+  C++ ++DK   +L  M   GV P  +TY++L++G+C V  +  A  L   + S+
Sbjct: 370 TMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSR 429

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   +     ILI+  C+  ++  A  + + M  + I P VITY+ L++G+ ++  + + 
Sbjct: 430 GITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHET 489

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF--------------------- 457
            +++ +MQ + ++P+   + T I   CK G+V EA++ F                     
Sbjct: 490 KEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHA 549

Query: 458 ----------QAIRNCKCELRIE----TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
                     +  R     + I     ++N +I+  C  G +  A  ++  +   G  P+
Sbjct: 550 FYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPN 609

Query: 504 VVTCSTMIHWLCKEGQ-----------------------------------MDKANDLLL 528
           V T   ++  LC+ G                                    +D+A DL  
Sbjct: 610 VCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCE 669

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
            M   NC+P   T+  LL GF +  K    +V+L +M  EK VV D
Sbjct: 670 KMIKNNCLPDIHTYTILLSGFCRKGKILPALVIL-QMMLEKGVVPD 714



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 180/403 (44%), Gaps = 4/403 (0%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F  + V+ N ++N L  EG         ++         V T N L+N LC    T    
Sbjct: 187 FKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLC----TNGEF 242

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           +  E+M+ +  +    + VTYN+I+    K G    A  +L  M+  ++  +V TYN +I
Sbjct: 243 RKAEDMLQKMKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMI 302

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
              C +     A  L   M  + + PD  T+N +IN   ++GK++    +   M+++ + 
Sbjct: 303 DKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLV 362

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P   TY +++DG+C   RI +A  +   M   G      +Y+ L+N  CK   +  A+ L
Sbjct: 363 PSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYL 422

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             ++ S  I  +      L+ G  QVG +  A +++  M  + + PD  T++  I+G+C+
Sbjct: 423 MEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCR 482

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
              + E  ++   ++          Y  LI   CK G +K A K F  +  +G + + V 
Sbjct: 483 MAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVI 542

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            + ++H   +EG + +A      M   N     V+F  ++  +
Sbjct: 543 HNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSY 585



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 136/297 (45%), Gaps = 3/297 (1%)

Query: 63   NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            ++++Y +  M++    P   ++ +L+  L++    D  V   +++   G+FPD  V ++L
Sbjct: 803  SKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDIL 862

Query: 123  INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
            I    +      A  V   +     +P++ TF+ +INGL  +G +  + ++  ++     
Sbjct: 863  ITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGL 922

Query: 183  DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             PN   +  L+N  CR      A +L EEM    G +  P  V  +SII GLC+ G +++
Sbjct: 923  QPNHTHYIALVNAKCRVGEIDRAFRLKEEM-KAIGIV--PAEVAESSIIRGLCRCGKLEE 979

Query: 243  AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            A  +   M    + P V T+ +L+   C      +A  L   M    ++ DVV++N +I 
Sbjct: 980  AVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLIT 1039

Query: 303  YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
              CKD  +     L   M  +G+ P+  TY +L       GR+    EL   +  +G
Sbjct: 1040 GLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERG 1096



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 1/221 (0%)

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G +    S N ++NA  ++ + +      RE L+ +    V T N LL+ L   G    A
Sbjct: 186 GFKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKA 245

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             ++ KM+ +  + +S T+ T +    K G    A+ V + +     +  + TYN +I+ 
Sbjct: 246 EDMLQKMK-SCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDK 304

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LC++ R   A  L  R++     PD  T +T+I+   +EG+++ A  +   M  +N VPS
Sbjct: 305 LCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPS 364

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
             T+ T++ G+ +N +  K + +L +M    ++ S+L+ S+
Sbjct: 365 VATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSA 405



 Score = 46.6 bits (109), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNC---KCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T ++ L + G   E+  V+  +R     K  L + T N L+N LC  G  + A  +  ++
Sbjct: 196 TILNALVEEG---ESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKM 252

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
           +    I + VT +T++HW  K+G+   A  +L DME  +      T+  ++    +  + 
Sbjct: 253 K-SCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRS 311

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           ++  +LL +M  + L   + + ++ +++   ++ K       F H+L
Sbjct: 312 TRAFLLLKRMRKDDLTPDECTYNT-LINGFFREGKINHARYVFNHML 357


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 267/541 (49%), Gaps = 26/541 (4%)

Query: 64  EAVYFFDCMIK-MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL---NSNGLFPDLFVL 119
           EAV FF  M   +     + SF  +L ++ +   +      +  +   NS G  P+L   
Sbjct: 118 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTY 177

Query: 120 NLLINCLCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
           NL+I  LCK+G    A      + L++C  P+  T++ L+NGLC E R+ EA  L  ++ 
Sbjct: 178 NLIIKALCKLGQIDRAVDTFREMPLKNC-NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 236

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
              C PN VTFN LI+ L +  +   A KL + M   F   C P+ VTYN++I GLC  G
Sbjct: 237 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNM---FLKGCVPNEVTYNTLIHGLCLKG 293

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +DKA  LL +M      PN +TY ++I G       ++   + + M + G + +   ++
Sbjct: 294 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 353

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++I+   K+GK +   RL + M ++G  P+ V Y + +DG C   +   A ++   M+SK
Sbjct: 354 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 413

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   + ++Y+ L+    K    + A+ +++EM+S+ +R +V+  + LL+GL + G L +A
Sbjct: 414 GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREA 473

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR--NCKCELRIETYNCLI 476
           L +   M    + PD   +++ I GLC  G V + +++F  ++    K    + TYN L 
Sbjct: 474 LTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILF 533

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           N LC+   L  A  L + +  +G  PD +TC+  +  L +     +   L LD       
Sbjct: 534 NALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLD------- 586

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
                   L+   ++  +K   + ++ +M   + +  + S  S+V+    K K+ RE ++
Sbjct: 587 -------ELVVRLLKRERKLSALRIVEEMLL-RFLPPEPSTWSRVIQRTCKPKRIRETID 638

Query: 597 Q 597
           +
Sbjct: 639 E 639



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 246/497 (49%), Gaps = 13/497 (2%)

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
           G  +F  L+   A ++++  +  +  R+   G      +  L+     K  +   A    
Sbjct: 64  GDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFF 123

Query: 140 GRILRSCFTPNTV-TFNFLINGLCAEGRIMEAARLFKKLNVFACD-----PNVVTFNTLI 193
            R+        TV +FN ++N +  EG    A + +  L+VF  +     PN++T+N +I
Sbjct: 124 HRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFY--LHVFGANSKGFQPNLLTYNLII 181

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
             LC+      A+  F EM  +    C PDV TY+++++GLCK+  VD+A  LL +M+  
Sbjct: 182 KALCKLGQIDRAVDTFREMPLKN---CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 238

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
              PN +T+N LI       D   A  L   M   G  P+ VT+N +I+  C  GK+DK 
Sbjct: 239 GCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 298

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             LLE M+     P+ VTY ++++G     R      + +SM  +G + + Y Y+ LI+ 
Sbjct: 299 LSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISG 358

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
             K+ K E+AV L++EM  +  +P+V+ Y   + GL +     +A  ++ +M     +P+
Sbjct: 359 LFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPN 418

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           +FT+++ + G  K G   +A+ V++ + +      +   + L+NGLC+ GRL+ A  ++ 
Sbjct: 419 AFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWT 478

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN--CVPSEVTFCTLLRGFVQ 551
            +  +G  PDVV  S+MI  LC  G +DK   L  +M+ +     P  VT+  L     +
Sbjct: 479 HMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCR 538

Query: 552 NNKKSKVVVLLHKMAAE 568
            +  ++ + LL+ M  E
Sbjct: 539 QDNLTRAIDLLNSMLDE 555



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 221/435 (50%), Gaps = 15/435 (3%)

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIM-EAARLFKKL-NVFACDPNVVTFNTLINGLC 197
           GR+L       T T   LI   C +  +  EA   F ++ N   C   V +FN+++N + 
Sbjct: 95  GRVL-------TETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVII 147

Query: 198 RTRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           +  +   A K +   ++ FGA  K   P+++TYN II  LCK G +D+A +   +M  +N
Sbjct: 148 QEGDFSYAFKFY---LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN 204

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
            NP+V TY++L+ G C      EA  L  EM   G  P+ VTFN +I+   K+G + +  
Sbjct: 205 CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAA 264

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           +L++ M  +G  P+ VTYN+L+ G CL G++ +A  L   MVS  C  +  +Y  +IN  
Sbjct: 265 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGL 324

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K ++ ED V +   M     + +   Y++L+SGLF+ G   +A++L  +M      P+ 
Sbjct: 325 VKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNV 384

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             +  +IDGLC++    EA  + Q + +        TY+ L+ G  K G  + A  ++  
Sbjct: 385 VVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKE 444

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  +    +VV CS +++ LC+ G++ +A  +   M  +   P  V + ++++G      
Sbjct: 445 MMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS 504

Query: 555 KSKVVVLLHKMAAEK 569
             K + L ++M  ++
Sbjct: 505 VDKGLKLFYEMQCQE 519



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 202/415 (48%), Gaps = 26/415 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV+  D M      P   +F +L+  L+KN        L   +   G  P+    N L
Sbjct: 226 DEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTL 285

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC  G    A  +L +++ S   PN VT+  +INGL  + R  +   +   +     
Sbjct: 286 IHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 345

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N   +++LI+GL +   +  A++L++EM  +    CKP+VV Y + IDGLC+D   D+
Sbjct: 346 KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG---CKPNVVVYGAFIDGLCRDEKPDE 402

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+++L +M  +   PN  TY+SL+ GF    D ++A  ++ EMM   ++ +VV  + ++N
Sbjct: 403 AEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLN 462

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM--VSKGC 360
             C+ G++ +   +   M+  G+ PD V Y+S++ G C VG + +  +LF  M       
Sbjct: 463 GLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKS 522

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF------QVGN 414
           R DV +YNIL NA C+   +  A+ L   ML E   P  +T N  L  L       Q G 
Sbjct: 523 RPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGR 582

Query: 415 LG---------------DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           L                 AL+++++M L  + P+  T++  I   CK   + E +
Sbjct: 583 LFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 637



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 197/398 (49%), Gaps = 35/398 (8%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A+  F  M N+    CK  V ++NS+++ + ++G    A +  L         +V   NS
Sbjct: 119 AVNFFHRMANDLH--CKQTVKSFNSVLNVIIQEGDFSYAFKFYL---------HVFGANS 167

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
                                   G QP+++T+N +I   CK G++D+       M  + 
Sbjct: 168 -----------------------KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN 204

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
            NPD  TY++LM+G C   R+  A  L   M ++GC  +  ++N+LI+A  K+  +  A 
Sbjct: 205 CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAA 264

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L   M  +   P+ +TYNTL+ GL   G L  AL L++KM  +  VP+  T+ T I+GL
Sbjct: 265 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGL 324

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
            K     + V +  ++     +     Y+ LI+GL K G+ + A +L+  +  KG  P+V
Sbjct: 325 VKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNV 384

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
           V     I  LC++ + D+A D+L +M +K  +P+  T+ +L++GF +     K +++  +
Sbjct: 385 VVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKE 444

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           M ++ +   ++   S +++ L +  + RE L  + H+L
Sbjct: 445 MMSQDM-RHNVVCCSVLLNGLCESGRLREALTVWTHML 481



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 21/287 (7%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S  AV  +  M +    P +  +   +  L ++++ D    + + + S G  P+ F  + 
Sbjct: 365 SENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 424

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+    K G +  A +V   ++      N V  + L+NGLC  GR+ EA  ++  +    
Sbjct: 425 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEG 484

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+VV ++++I GLC   +    LKLF EM  +     +PDVVTYN + + LC+   + 
Sbjct: 485 LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ-EPKSRPDVVTYNILFNALCRQDNLT 543

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV---VTFN 298
           +A +LL  M D   +P+ +T N                 +F+E +   + P     +  +
Sbjct: 544 RAIDLLNSMLDEGCDPDSLTCN-----------------IFLETLRERINPPQDGRLFLD 586

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
            ++    K  +     R++E M+ R + P+  T++ ++   C   RI
Sbjct: 587 ELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRI 633


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 252/532 (47%), Gaps = 39/532 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP +  FT  +    K  + +  V LF ++   G+ P++   N +I+ L   G    AF+
Sbjct: 270 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 329

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
              +++     P  +T++ L+ GL    RI +A  + K++      PNV+ +N LI+   
Sbjct: 330 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 389

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
              +   A+++ + MV++  ++      TYN++I G CK+G  D A+ LL +M     N 
Sbjct: 390 EAGSLNKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N  ++ S+IC  C    +  A     EM+   + P       +I+  CK GK  K   L 
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 506

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
              + +G   DT T N+L+ G C  G++  A  +   ++ +GC  D  SYN LI+  C  
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           +K+++A     EM+   ++P   TY+ L+ GLF +  + +A++  D  + N ++PD +T+
Sbjct: 567 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           +  IDG CK     E  + F  + +   +     YN LI   C+ GRL  A +L   ++H
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686

Query: 498 KGPIPDVVTCSTMI-----------------------------HWLC------KEGQMDK 522
           KG  P+  T +++I                             H+        K GQM K
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
              LL +M +KN  P+++T+  ++ G+ ++   ++   LL++M  EK +V D
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM-REKGIVPD 797



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 242/491 (49%), Gaps = 3/491 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA  F + M++    P + +++IL+  L + K+      + K +   G  P++ V N L
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   + G  + A  +   ++    +  + T+N LI G C  G+   A RL K++     
Sbjct: 385 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 444

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + N  +F ++I  LC       AL+   EM+    +   P      ++I GLCK G   K
Sbjct: 445 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS---PGGGLLTTLISGLCKHGKHSK 501

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL  Q  ++    +  T N+L+ G C      EA  +  E++  G   D V++N +I+
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   K+D+    L+ M++RG+ PD  TY+ L+ G   + ++  A + +      G   
Sbjct: 562 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 621

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DVY+Y+++I+  CK ++ E+    + EM+S+ ++P+ + YN L+    + G L  AL+L 
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M+   + P+S T+ + I G+     V EA  +F+ +R    E  +  Y  LI+G  K+
Sbjct: 682 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 741

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G++     L   +  K   P+ +T + MI    ++G + +A+ LL +M  K  VP  +T+
Sbjct: 742 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801

Query: 543 CTLLRGFVQNN 553
              + G+++  
Sbjct: 802 KEFIYGYLKQG 812



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 207/395 (52%), Gaps = 6/395 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           SFT ++ +L  +  +D+ +     +    + P   +L  LI+ LCK G  S A  +  + 
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 509

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L   F  +T T N L++GLC  G++ EA R+ K++    C  + V++NTLI+G C  +  
Sbjct: 510 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 569

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A    +EMV       KPD  TY+ +I GL     V++A +     K   + P+V TY
Sbjct: 570 DEAFMFLDEMVKRG---LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + +I G C  +  +E +  F EMM   VQP+ V +N +I   C+ G++     L E M  
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +G++P++ TY SL+ G  ++ R+  A+ LF  M  +G   +V+ Y  LI+   K  ++  
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
             CL REM S+ + P+ ITY  ++ G  + GN+ +A +L+++M+   +VPDS T+  +I 
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 806

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           G  K G VLEA   F+          IE +N LI 
Sbjct: 807 GYLKQGGVLEA---FKGSDEENYAAIIEGWNKLIQ 838



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 195/379 (51%), Gaps = 10/379 (2%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFV 240
           P+  T N L+  L R          F++    F  +CK   PDV  + + I+  CK G V
Sbjct: 237 PSKTTCNILLTSLVRANE-------FQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 289

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           ++A +L  +M++  + PNV+T+N++I G      + EA     +M++ G++P ++T++ +
Sbjct: 290 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 349

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +    +  ++     +L+ M ++G  P+ + YN+L+D F   G +++A E+   MVSKG 
Sbjct: 350 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 409

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
                +YN LI   CK+ + ++A  L +EMLS     +  ++ +++  L        AL+
Sbjct: 410 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 469

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
            + +M L ++ P      T I GLCK+G   +A++++    N    +   T N L++GLC
Sbjct: 470 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 529

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G+L  A ++   +  +G + D V+ +T+I   C + ++D+A   L +M  +   P   
Sbjct: 530 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 589

Query: 541 TFCTLLRGFVQNNKKSKVV 559
           T+  L+ G    NK  + +
Sbjct: 590 TYSILICGLFNMNKVEEAI 608



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 176/375 (46%), Gaps = 36/375 (9%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           + ++ + P+  T N L+      +++++  C   +++  GV PDV  F   IN  CK GK
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKC-CEAFDVVCKGVSPDVYLFTTAINAFCKGGK 288

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +++  +L   M + GV P+ VT+N+++DG  + GR   A      MV +G    + +Y+I
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L+    + +++ DA  + +EM  +   P+VI YN L+    + G+L  A+++ D M    
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC--------------- 474
           +   S T+ T I G CKNG    A ++ + + +    +   ++                 
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468

Query: 475 --------------------LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
                               LI+GLCK G+   A +L+ +  +KG + D  T + ++H L
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C+ G++D+A  +  ++  + CV   V++ TL+ G     K  +  + L +M    L   +
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 588

Query: 575 LSLSSKVVDLLSKDK 589
            + S  +  L + +K
Sbjct: 589 YTYSILICGLFNMNK 603



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 61/134 (45%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP   ++T L+  ++   + +    LF+ +   GL P++F    LI+   K+G       
Sbjct: 690 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 749

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +      PN +T+  +I G   +G + EA+RL  ++      P+ +T+   I G  
Sbjct: 750 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 809

Query: 198 RTRNTLVALKLFEE 211
           +    L A K  +E
Sbjct: 810 KQGGVLEAFKGSDE 823


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 146/437 (33%), Positives = 219/437 (50%), Gaps = 12/437 (2%)

Query: 91  LAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
           L +  Q +    LFK      L PD     +LI  LC  G    A  +   ++     P 
Sbjct: 100 LIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPV 159

Query: 151 TVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE 210
            +T  FL+N LC  G +  A R F+K++   C     T+  LI+GL R      A   FE
Sbjct: 160 VLTCKFLLNALCKSGNLELALRYFEKMSSIPC---AATWTILIDGLFRAIRVDEACYYFE 216

Query: 211 EMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           EM  +  AI  P+  TY  +I+GL K G V +A+ +L +M      P +  Y S+I G C
Sbjct: 217 EM--KHTAI--PNNWTYTVVINGLVKAGKVAEAERVLQEMP----VPTLANYTSVIGGHC 268

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
              D  +A  L  +M   G Q D +T+N +I+ +C+  ++D+   LLE M      PD  
Sbjct: 269 KAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIF 328

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSK-GCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           TY+ L+ G C   R+S AR+L  ++ ++  C  +V SYN LI+   K  +V DA  L+ E
Sbjct: 329 TYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLE 388

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M++    P V+TY+TL+ GL   G   +A   +++M    ++P    +++ I GLC+ G 
Sbjct: 389 MVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGE 448

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           +  A  VF ++    C+  +  YN LI GLCK GRL  A      +  +G  PD VT  T
Sbjct: 449 LDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGT 508

Query: 510 MIHWLCKEGQMDKANDL 526
           +I  LC+  + D+A DL
Sbjct: 509 LIVGLCRWSRTDEACDL 525



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 151/576 (26%), Positives = 264/576 (45%), Gaps = 52/576 (9%)

Query: 60  ITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
           I  +EA Y+F+ M K    P   ++T+++  L K  +    V+  +R+      P L   
Sbjct: 206 IRVDEACYYFEEM-KHTAIPNNWTYTVVINGLVKAGK----VAEAERVLQEMPVPTLANY 260

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
             +I   CK G    A+ +L  + R  +  + +T+N LI+G C    I  A  L +++  
Sbjct: 261 TSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKS 320

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P++ T++ LI GLCR +    A  L   + NE    C P+VV+YN++IDG  K   
Sbjct: 321 NDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDD--CTPNVVSYNTLIDGFSKAAR 378

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           V+ A +L L+M     +P+V+TY++LI G C      EA     EM+   + P V  +++
Sbjct: 379 VNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSS 438

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  C+ G++D  + + + M+  G  P+   YNSL+ G C  GR+  A+     M  +G
Sbjct: 439 VISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERG 498

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR----------------------- 396
           C  D  +Y  LI   C+  + ++A  LY   L + I                        
Sbjct: 499 CSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVL 558

Query: 397 ---------PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
                    P+   Y T++  L +  NL +A +L++ M    + PD  T    +  +C+ 
Sbjct: 559 RVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQ 618

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL-QHKGPIPDVVT 506
              + A+   + +     +  + TY+ L+N L K G+   A  +  RL  H    PD + 
Sbjct: 619 DKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELW 678

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              +I     + Q+++A ++L ++++K  + S V + TLL+G  +      V  LL +M 
Sbjct: 679 YVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMK 738

Query: 567 AEKLVVSD------------LSLSSKVVDLLSKDKK 590
             + VV++            L  + + V +LS+ KK
Sbjct: 739 RNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKK 774



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 154/581 (26%), Positives = 270/581 (46%), Gaps = 53/581 (9%)

Query: 51  LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +N   K+G +   E V      ++  P P + ++T ++    K         L + +   
Sbjct: 233 INGLVKAGKVAEAERV------LQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRK 286

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G   D    N LI+  C++     A+ +L  +  + F P+  T++ LI GLC   R+ EA
Sbjct: 287 GYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEA 346

Query: 171 ARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
             L   L N   C PNVV++NTLI+G  +      A +LF EMV    A   PDVVTY++
Sbjct: 347 RDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVT---AGQHPDVVTYST 403

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I GLC  G   +A   L +M  + I P V  Y+S+I G C   +   A  +F  M+ NG
Sbjct: 404 LIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANG 463

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
            QP++  +N++I   CK G++      ++ M +RG +PD VTY +L+ G C   R   A 
Sbjct: 464 CQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEAC 523

Query: 350 ELFVSMVSKGCRHDVYSYNILINA-NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           +L+V  + +G      S N++I +  C    +E A  + R +L+    P+   Y T++  
Sbjct: 524 DLYVRSLEQGIEISETSCNVVIASLRC----LEQAQRVLRVVLATGNSPTAFFYATVIES 579

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
           L +  NL +A +L++ M    + PD  T    +  +C+    + A+   + +     +  
Sbjct: 580 LCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPS 639

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRL-QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           + TY+ L+N L K G+   A  +  RL  H    PD +    +I     + Q+++A ++L
Sbjct: 640 VGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVL 699

Query: 528 LDMEAKNCVPS-----------------------------------EVTFCTLLRGFVQN 552
            ++++K  + S                                   E TF  L++GF + 
Sbjct: 700 QELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRL 759

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            +  + V +L +M  +K++    ++   +VD L++ ++ +E
Sbjct: 760 GQTDRAVRVLSEM--KKVLTPSAAIIKFLVDELARAEREQE 798



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 237/484 (48%), Gaps = 20/484 (4%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N     L + G    A+ +          P+++T+  LI GLC  G++  A  L++++  
Sbjct: 94  NCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVD 153

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P V+T   L+N LC++ N  +AL+ FE+M +       P   T+  +IDGL +   
Sbjct: 154 RGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS------IPCAATWTILIDGLFRAIR 207

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           VD+A     +MK   I PN  TY  +I G        EA+ +  EM      P +  + +
Sbjct: 208 VDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEM----PVPTLANYTS 262

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I  +CK G M K   LLE M ++G   D +TYN+L+ G C +  I RA EL   M S  
Sbjct: 263 VIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSND 322

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVITYNTLLSGLFQVGNLGDA 418
              D+++Y+ILI   C+ +++ +A  L   + +E    P+V++YNTL+ G  +   + DA
Sbjct: 323 FVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDA 382

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            +L  +M      PD  T++T I GLC  G   EA    + +   K   ++  Y+ +I+G
Sbjct: 383 YQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISG 442

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           LC+ G L  A  +F  +   G  P++   +++I+ LCK G++  A   + +M  + C P 
Sbjct: 443 LCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPD 502

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
            VT+ TL+ G  + ++  +   L  +   + + +S+ S +  +  L         CL Q 
Sbjct: 503 GVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL--------RCLEQA 554

Query: 599 RHLL 602
           + +L
Sbjct: 555 QRVL 558



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 235/536 (43%), Gaps = 44/536 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F      +  P   ++ IL+  L    +     SL++ +   GL P +     L
Sbjct: 107 EEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFL 166

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G    A     ++      P   T+  LI+GL    R+ EA   F+++   A 
Sbjct: 167 LNALCKSGNLELALRYFEKM---SSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAI 223

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN  T+  +INGL +      A ++ +EM         P +  Y S+I G CK G + K
Sbjct: 224 -PNNWTYTVVINGLVKAGKVAEAERVLQEMP-------VPTLANYTSVIGGHCKAGDMGK 275

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  LL  MK +    + +TYN+LI G C + +   A  L  EM  N   PD+ T++ +I 
Sbjct: 276 AYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIA 335

Query: 303 YNCKDGKMDKVNRLL-ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
             C+  ++ +   LL  L  +    P+ V+YN+L+DGF    R++ A +LF+ MV+ G  
Sbjct: 336 GLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQH 395

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            DV +Y+ LI   C   +  +A     EM+ ++I P V  Y++++SGL + G L  A  +
Sbjct: 396 PDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTV 455

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            D M  N   P+   + + I GLCK G + +A    + +    C     TY  LI GLC+
Sbjct: 456 FDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCR 515

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTC--------------------------------ST 509
             R   AC L+ R   +G      +C                                +T
Sbjct: 516 WSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYAT 575

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +I  LCKE  + +A  LL DM      P   T   L+    + +K    +  L +M
Sbjct: 576 VIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEM 631



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 171/376 (45%), Gaps = 36/376 (9%)

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V TYN   + L + G  ++A  L  +   + + P+ ITY  LI G C     K A  L+ 
Sbjct: 90  VHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYE 149

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM----------------------- 320
           EM+D G++P V+T   ++N  CK G ++   R  E M                       
Sbjct: 150 EMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVD 209

Query: 321 --------IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
                   ++    P+  TY  +++G    G+++ A  +   M        + +Y  +I 
Sbjct: 210 EACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVP----TLANYTSVIG 265

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
            +CK   +  A  L  +M  +  +   +TYNTL+ G  ++  +  A +L+++M+ ND VP
Sbjct: 266 GHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVP 325

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNC-KCELRIETYNCLINGLCKMGRLKTACKL 491
           D FT+   I GLC+   + EA  +   +RN   C   + +YN LI+G  K  R+  A +L
Sbjct: 326 DIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQL 385

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           F  +   G  PDVVT ST+I  LC  G+  +A+  L +M  K  +P    + +++ G  +
Sbjct: 386 FLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCR 445

Query: 552 NNKKSKVVVLLHKMAA 567
             +      +   M A
Sbjct: 446 AGELDAASTVFDSMVA 461



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 33/241 (13%)

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
           RH V++YN    A  +  + E+A  L++E   + + P  ITY  L+ GL   G L  A  
Sbjct: 87  RHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACS 146

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L ++M    + P   T    ++ LCK+G +  A++ F+ + +  C     T+  LI+GL 
Sbjct: 147 LYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPC---AATWTILIDGLF 203

Query: 481 KMGRLKTACKLFHRLQHKG------------------------------PIPDVVTCSTM 510
           +  R+  AC  F  ++H                                P+P +   +++
Sbjct: 204 RAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSV 263

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           I   CK G M KA  LL DM+ K      +T+ TL+ G  +  +  +   LL +M +   
Sbjct: 264 IGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDF 323

Query: 571 V 571
           V
Sbjct: 324 V 324



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 1/96 (1%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++  LL  L + +    V  L + +  N    +    N+LI   C++G T  A  VL 
Sbjct: 711 IVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLS 770

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
             ++   TP+     FL++ L    R  E+  L K+
Sbjct: 771 E-MKKVLTPSAAIIKFLVDELARAEREQESKDLVKR 805


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 252/532 (47%), Gaps = 39/532 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP +  FT  +    K  + +  V LF ++   G+ P++   N +I+ L   G    AF+
Sbjct: 246 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 305

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
              +++     P  +T++ L+ GL    RI +A  + K++      PNV+ +N LI+   
Sbjct: 306 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 365

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
              +   A+++ + MV++  ++      TYN++I G CK+G  D A+ LL +M     N 
Sbjct: 366 EAGSLNKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 422

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N  ++ S+IC  C    +  A     EM+   + P       +I+  CK GK  K   L 
Sbjct: 423 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 482

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
              + +G   DT T N+L+ G C  G++  A  +   ++ +GC  D  SYN LI+  C  
Sbjct: 483 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 542

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           +K+++A     EM+   ++P   TY+ L+ GLF +  + +A++  D  + N ++PD +T+
Sbjct: 543 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 602

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           +  IDG CK     E  + F  + +   +     YN LI   C+ GRL  A +L   ++H
Sbjct: 603 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 662

Query: 498 KGPIPDVVTCSTMI-----------------------------HWLC------KEGQMDK 522
           KG  P+  T +++I                             H+        K GQM K
Sbjct: 663 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 722

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
              LL +M +KN  P+++T+  ++ G+ ++   ++   LL++M  EK +V D
Sbjct: 723 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM-REKGIVPD 773



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 242/491 (49%), Gaps = 3/491 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA  F + M++    P + +++IL+  L + K+      + K +   G  P++ V N L
Sbjct: 301 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 360

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   + G  + A  +   ++    +  + T+N LI G C  G+   A RL K++     
Sbjct: 361 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 420

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + N  +F ++I  LC       AL+   EM+    +   P      ++I GLCK G   K
Sbjct: 421 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS---PGGGLLTTLISGLCKHGKHSK 477

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL  Q  ++    +  T N+L+ G C      EA  +  E++  G   D V++N +I+
Sbjct: 478 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 537

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C   K+D+    L+ M++RG+ PD  TY+ L+ G   + ++  A + +      G   
Sbjct: 538 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 597

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DVY+Y+++I+  CK ++ E+    + EM+S+ ++P+ + YN L+    + G L  AL+L 
Sbjct: 598 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 657

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M+   + P+S T+ + I G+     V EA  +F+ +R    E  +  Y  LI+G  K+
Sbjct: 658 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 717

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G++     L   +  K   P+ +T + MI    ++G + +A+ LL +M  K  VP  +T+
Sbjct: 718 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 777

Query: 543 CTLLRGFVQNN 553
              + G+++  
Sbjct: 778 KEFIYGYLKQG 788



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 207/395 (52%), Gaps = 6/395 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           SFT ++ +L  +  +D+ +     +    + P   +L  LI+ LCK G  S A  +  + 
Sbjct: 426 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 485

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L   F  +T T N L++GLC  G++ EA R+ K++    C  + V++NTLI+G C  +  
Sbjct: 486 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 545

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A    +EMV       KPD  TY+ +I GL     V++A +     K   + P+V TY
Sbjct: 546 DEAFMFLDEMVKRG---LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 602

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + +I G C  +  +E +  F EMM   VQP+ V +N +I   C+ G++     L E M  
Sbjct: 603 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 662

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +G++P++ TY SL+ G  ++ R+  A+ LF  M  +G   +V+ Y  LI+   K  ++  
Sbjct: 663 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 722

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
             CL REM S+ + P+ ITY  ++ G  + GN+ +A +L+++M+   +VPDS T+  +I 
Sbjct: 723 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 782

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           G  K G VLEA   F+          IE +N LI 
Sbjct: 783 GYLKQGGVLEA---FKGSDEENYAAIIEGWNKLIQ 814



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 195/379 (51%), Gaps = 10/379 (2%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFV 240
           P+  T N L+  L R          F++    F  +CK   PDV  + + I+  CK G V
Sbjct: 213 PSKTTCNILLTSLVRANE-------FQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 265

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           ++A +L  +M++  + PNV+T+N++I G      + EA     +M++ G++P ++T++ +
Sbjct: 266 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 325

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +    +  ++     +L+ M ++G  P+ + YN+L+D F   G +++A E+   MVSKG 
Sbjct: 326 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 385

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
                +YN LI   CK+ + ++A  L +EMLS     +  ++ +++  L        AL+
Sbjct: 386 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 445

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
            + +M L ++ P      T I GLCK+G   +A++++    N    +   T N L++GLC
Sbjct: 446 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 505

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + G+L  A ++   +  +G + D V+ +T+I   C + ++D+A   L +M  +   P   
Sbjct: 506 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 565

Query: 541 TFCTLLRGFVQNNKKSKVV 559
           T+  L+ G    NK  + +
Sbjct: 566 TYSILICGLFNMNKVEEAI 584



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 176/375 (46%), Gaps = 36/375 (9%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           + ++ + P+  T N L+      +++++  C   +++  GV PDV  F   IN  CK GK
Sbjct: 206 LANKGMFPSKTTCNILLTSLVRANEFQKC-CEAFDVVCKGVSPDVYLFTTAINAFCKGGK 264

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +++  +L   M + GV P+ VT+N+++DG  + GR   A      MV +G    + +Y+I
Sbjct: 265 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 324

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L+    + +++ DA  + +EM  +   P+VI YN L+    + G+L  A+++ D M    
Sbjct: 325 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 384

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC--------------- 474
           +   S T+ T I G CKNG    A ++ + + +    +   ++                 
Sbjct: 385 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 444

Query: 475 --------------------LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
                               LI+GLCK G+   A +L+ +  +KG + D  T + ++H L
Sbjct: 445 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 504

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C+ G++D+A  +  ++  + CV   V++ TL+ G     K  +  + L +M    L   +
Sbjct: 505 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 564

Query: 575 LSLSSKVVDLLSKDK 589
            + S  +  L + +K
Sbjct: 565 YTYSILICGLFNMNK 579



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 13/159 (8%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP   ++T L+  ++   + +    LF+ +   GL P++F    LI+   K+G       
Sbjct: 666 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 725

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +L  +      PN +T+  +I G   +G + EA+RL  ++      P+ +T+   I G  
Sbjct: 726 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 785

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +    L A K               D   Y +II+G  K
Sbjct: 786 KQGGVLEAFK-------------GSDEENYAAIIEGWNK 811


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 231/452 (51%), Gaps = 7/452 (1%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           N  ++N L+  LC  GR+ +A +LF ++   A  P+VVT+  LI+G C       A+KL 
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLL 317

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
           ++MV       +P+   Y S++  LC  G V  A  ++  M    +  +   Y +++ GF
Sbjct: 318 DDMVARG---VEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGF 374

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C   D   A+  F EM   G+  D VT+  +IN  C+ G++ +  ++L+ M+ R ++ D 
Sbjct: 375 CNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDE 434

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTY  L+DG+C  G+++ A ++  +MV +G   +V +Y  L +  CK   V+ A  L  E
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M ++ +  +  TYN+L++GL + G L  A++ +  M    + PD +T+ T ID LCK+G 
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           +  A  + Q + +   +  I TYN L+NG C  GR++   KL   +  K   P+  T ++
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           ++   C    M    ++   M ++N  P+E T+  L++G  +  +  K     H    EK
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCK-ARSMKEAQYFHNEMIEK 673

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
                 S  S ++ LL+K KK+ E    F  +
Sbjct: 674 GFRLTASSYSALIRLLNKKKKFVEARKLFHDM 705



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 205/404 (50%), Gaps = 21/404 (5%)

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
            F+ +  +F+ L+  LC     + +A L +++  +   P+    N +++ L         
Sbjct: 202 AFSSDPASFDLLL--LC-----LPSAPLLRRVRQYGISPSPEACNAVLSRLP-------- 246

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
               +E +  F  +   +V +YN ++  LC  G V+ A++L  +M      P+V+TY  L
Sbjct: 247 ---LDEAIELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGIL 300

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I G+C + + + A  L  +M+  GV+P+   + +++   C  G++     ++E M+   V
Sbjct: 301 IHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKV 360

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
             D   Y +++ GFC  G +  AR  F  M  KG   D  +Y  LIN  C+  ++++A  
Sbjct: 361 ILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEK 420

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           + +EML+ R+    +TY  L+ G  + G + +A ++ + M    V P+  T+    DGLC
Sbjct: 421 VLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLC 480

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K G V  A ++   + N   EL   TYN LINGLCK G L  A +    +   G  PDV 
Sbjct: 481 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVY 540

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           T +T+I  LCK G++D+A+DLL +M      P+ VT+  L+ GF
Sbjct: 541 TYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGF 584



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 213/444 (47%), Gaps = 8/444 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A   FD   +M   P + ++ IL+       + +  V L   + + G+ P+  V   +
Sbjct: 279 EDARQLFD---EMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSV 335

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC  G  S A  V+  ++      +   +  +++G C +G ++ A R F ++     
Sbjct: 336 VALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGL 395

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             + VT+ TLINGLCR      A K+ +EM+     +   D VTY  ++DG CK G + +
Sbjct: 396 ATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDV---DEVTYTVLVDGYCKRGKMAE 452

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ++   M  R + PNV+TY +L  G C   D + A  L  EM + G++ +  T+N++IN
Sbjct: 453 AFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 512

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G +D+  R +  M   G+ PD  TY +L+D  C  G + RA +L   M+  G + 
Sbjct: 513 GLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKP 572

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            + +YN+L+N  C   +VE    L   ML + I P+  TYN+L+       N+    ++ 
Sbjct: 573 TIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIY 632

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M   +V P+  T+   I G CK   + EA      +      L   +Y+ LI  L K 
Sbjct: 633 KGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKK 692

Query: 483 GRLKTACKLFHRLQHKG--PIPDV 504
            +   A KLFH ++ +G    PDV
Sbjct: 693 KKFVEARKLFHDMRKEGFTAEPDV 716



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 202/400 (50%), Gaps = 12/400 (3%)

Query: 45  TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
           TS+   L D+   G ++  +A+   + M+  K       +T +L+         +    F
Sbjct: 333 TSVVALLCDK---GRVS--DALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWF 387

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
             +   GL  D      LIN LC+ G    A  VL  +L      + VT+  L++G C  
Sbjct: 388 DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKR 447

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           G++ EA ++   +      PNVVT+  L +GLC+  +   A +L  EM N+   +   + 
Sbjct: 448 GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL---NA 504

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
            TYNS+I+GLCK G++D+A   +  M    + P+V TY +LI   C   +   A  L  E
Sbjct: 505 CTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQE 564

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M+DNG++P +VT+N ++N  C  G+++   +LLE M+++ ++P+  TYNSLM  +C+   
Sbjct: 565 MLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNN 624

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +    E++  M S+    +  +YNILI  +CK + +++A   + EM+ +  R +  +Y+ 
Sbjct: 625 MKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSA 684

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVV--PDSFTFATYID 442
           L+  L +     +A KL   M+       PD + F  YID
Sbjct: 685 LIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF--YID 722



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 202/413 (48%), Gaps = 3/413 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV   D M+     P  T +T ++ +L    +    +++ + +  + +  D  V   +++
Sbjct: 313 AVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLS 372

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             C  G    A      + R     + VT+  LINGLC  G + EA ++ +++     D 
Sbjct: 373 GFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDV 432

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           + VT+  L++G C+      A ++   MV    A   P+VVTY ++ DGLCK G V  A 
Sbjct: 433 DEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVA---PNVVTYTALSDGLCKQGDVQAAN 489

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           ELL +M ++ +  N  TYNSLI G C      +A     +M   G++PDV T+  +I+  
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           CK G++D+ + LL+ M+  G+ P  VTYN LM+GFC+ GR+   ++L   M+ K    + 
Sbjct: 550 CKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNA 609

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +YN L+   C    ++    +Y+ M S  + P+  TYN L+ G  +  ++ +A    ++
Sbjct: 610 TTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNE 669

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           M        + +++  I  L K    +EA ++F  +R        + YN  I+
Sbjct: 670 MIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 220/473 (46%), Gaps = 14/473 (2%)

Query: 98  DTVVSLFKRLNSNGLFPDLFV--LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           D  + LF+ L      PD  V   N+L+  LC  G    A  +   +      P+ VT+ 
Sbjct: 248 DEAIELFQGL------PDKNVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYG 298

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+G CA G +  A +L   +     +PN   + +++  LC       AL + E+MV+ 
Sbjct: 299 ILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHH 358

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
              +   D   Y +++ G C  G +  A+    +M+ + +  + +TY +LI G C   + 
Sbjct: 359 KVIL---DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGEL 415

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           KEA+ +  EM+   +  D VT+  +++  CK GKM +  ++   M+QRGV P+ VTY +L
Sbjct: 416 KEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTAL 475

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
            DG C  G +  A EL   M +KG   +  +YN LIN  CK   ++ A+    +M +  +
Sbjct: 476 SDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGL 535

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
           +P V TY TL+  L + G L  A  L+ +M  N + P   T+   ++G C +G V    +
Sbjct: 536 KPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKK 595

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           + + +          TYN L+   C    +K+  +++  +  +   P+  T + +I   C
Sbjct: 596 LLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHC 655

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           K   M +A     +M  K    +  ++  L+R   +  K  +   L H M  E
Sbjct: 656 KARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKE 708



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 179/374 (47%), Gaps = 5/374 (1%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G++ S  A  +FD M +   +    ++T L+  L +  +      + + + +  L  D  
Sbjct: 378 GDLVS--ARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEV 435

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
              +L++  CK G  + AF V   +++    PN VT+  L +GLC +G +  A  L  ++
Sbjct: 436 TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM 495

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           +    + N  T+N+LINGLC+      A++   +M     A  KPDV TY ++ID LCK 
Sbjct: 496 SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMD---AAGLKPDVYTYTTLIDALCKS 552

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G +D+A +LL +M D  I P ++TYN L+ GFC     +  K L   M++  + P+  T+
Sbjct: 553 GELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTY 612

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N+++   C    M     + + M  R V P+  TYN L+ G C    +  A+     M+ 
Sbjct: 613 NSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIE 672

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           KG R    SY+ LI    K +K  +A  L+ +M  E        YN  +   F   NL  
Sbjct: 673 KGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEA 732

Query: 418 ALKLIDKMQLNDVV 431
            L L D++    +V
Sbjct: 733 TLALCDELVEASIV 746


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 248/525 (47%), Gaps = 6/525 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  ++  L K  + D    L   ++  GL P++ V + LI+   + G    AF +
Sbjct: 311 PDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKI 370

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  +  +   PN +T++ LI GLC  GR+  A+R+ K++       + +T+N +I G  R
Sbjct: 371 VKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLR 430

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             N   A  L  EM    G I  P+V TY+ II+GLC+ G  ++A  LL QM    + PN
Sbjct: 431 QHNKEEAFLLLNEMRK--GGI-SPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPN 487

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              Y  LI G+C    +  A     +M    + PD+  +N++I      GKMD+     +
Sbjct: 488 AFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYD 547

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+++G  P+  TY  L+ G+ + G + +A +L   M++ G   + + Y  ++    K  
Sbjct: 548 EMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSD 607

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +E      + ML + + P    Y  ++  L   G++  A+ ++  ++ N +VPDS  + 
Sbjct: 608 NLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYG 667

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           + I G CK   + +AV +   +     E  I  YN LI+G CK   +  A  +F+ +  K
Sbjct: 668 SLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICK 727

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  P+ VT +T+I   CK G +  A DL  +M  +   P    +  L  G   +    + 
Sbjct: 728 GLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQA 787

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
           + +  +M A    +  +S  + +V    K  K +E + +F H++ 
Sbjct: 788 LFITEEMIARGYAI--ISSFNTLVHGFCKRGKLQETV-KFLHVMM 829



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 235/496 (47%), Gaps = 4/496 (0%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           +   G+ PD++  + LI   CK+     A  V+  +  +  + N VT+N LI GLC  G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           I EA    K++  +   P+  T+  +INGLC+      A  L +EM     A   P+VV 
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC---AGLMPNVVV 350

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+++IDG  + G  D+A +++ +M    + PN ITY++LI G C +     A  +  +M 
Sbjct: 351 YSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMT 410

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G   D +T+N +I  + +    ++   LL  M + G++P+  TY+ +++G C +G   
Sbjct: 411 KIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESE 470

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
           RA  L   M++ G + + + Y  LI+  C++     A    ++M  E + P +  YN+L+
Sbjct: 471 RASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLI 530

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL  VG + +A++  D+M      P+ FT+   I G    G + +A Q+   + N    
Sbjct: 531 IGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN 590

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
                Y  ++ G  K   L+        +  KG +PD      +IH L   G M  A  +
Sbjct: 591 PNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSV 650

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           L  +E    VP  + + +L+ GF +     K V LL +M A+K +   +S  + ++D   
Sbjct: 651 LSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEM-AKKGIEPGISCYNALIDGFC 709

Query: 587 KDKKYRECLNQFRHLL 602
           K        N F  ++
Sbjct: 710 KSDDISHARNIFNSII 725



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 223/433 (51%), Gaps = 4/433 (0%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L   +   G+ P+++  +++IN LC++G +  A  +L +++     PN   +  LI+G C
Sbjct: 440 LLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYC 499

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            EG    A    KK+      P++  +N+LI GL        A++ ++EM+ +     +P
Sbjct: 500 REGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKG---FQP 556

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +  TY  +I G    G ++KA++LL QM +  +NPN   Y  ++ G+   D+ ++     
Sbjct: 557 NDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTL 616

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
             M++ G+ PD   +  +I+     G M     +L ++ + G+ PD++ Y SL+ GFC  
Sbjct: 617 KSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKA 676

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             + +A  L   M  KG    +  YN LI+  CK   +  A  ++  ++ + + P+ +TY
Sbjct: 677 ADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTY 736

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            TL+ G  + G++ DA+ L ++M    V PD+F ++    G   +G + +A+ + + +  
Sbjct: 737 TTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMI- 795

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
            +    I ++N L++G CK G+L+   K  H +  K  +P ++T   ++  L + G++ +
Sbjct: 796 ARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSE 855

Query: 523 ANDLLLDMEAKNC 535
           A+ + ++++ KN 
Sbjct: 856 AHTIFVELQQKNA 868



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/580 (24%), Positives = 257/580 (44%), Gaps = 40/580 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG +    +N   K G    ++A    D M      P +  ++ L+    +    D    
Sbjct: 312 DGFTYGAIINGLCKRGR--PDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFK 369

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           + K +++ G+ P+    + LI  LCK+G    A  +L ++ +  +  +T+T+N +I G  
Sbjct: 370 IVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHL 429

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
            +    EA  L  ++      PNV T++ +INGLC+   +  A  L E+M+ +     KP
Sbjct: 430 RQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADG---LKP 486

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
           +   Y  +I G C++G    A E L +M   N+ P++  YNSLI G   V    EA   +
Sbjct: 487 NAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYY 546

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            EM++ G QP+  T+  +I+     G ++K  +LL  M+  G+NP+   Y  +++G+   
Sbjct: 547 DEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKS 606

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
             + +      SM+ KG   D   Y I+I+       ++ AV +   +    + P  + Y
Sbjct: 607 DNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIY 666

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
            +L+SG  +  ++  A+ L+D+M    + P    +   IDG CK+  +  A  +F +I  
Sbjct: 667 GSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIIC 726

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS-------------- 508
                   TY  LI+G CK G ++ A  L++ +  +G  PD    S              
Sbjct: 727 KGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQ 786

Query: 509 --------------------TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
                               T++H  CK G++ +    L  M  K+ VPS +T   ++ G
Sbjct: 787 ALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIG 846

Query: 549 FVQNNKKSKVVVLLHKMAAEKLVVSDLS-LSSKVVDLLSK 587
             +  K S+   +  ++  +     D   LSS   D++++
Sbjct: 847 LGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQ 886



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 228/482 (47%), Gaps = 27/482 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA    + M K   SP + +++I++  L +  + +    L +++ ++GL P+ FV   L
Sbjct: 435 EEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPL 494

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C+ G  S A   L ++ R   TP+   +N LI GL   G++ EA   + ++     
Sbjct: 495 ISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGF 554

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN  T+  LI+G     N   A +L  +M+N   +   P+   Y  I++G  K   ++K
Sbjct: 555 QPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLN---SGLNPNDFIYAQILEGYFKSDNLEK 611

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
               L  M ++ + P+   Y  +I         + A  +   +  NG+ PD + + ++I+
Sbjct: 612 VSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLIS 671

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK   M+K   LL+ M ++G+ P    YN+L+DGFC    IS AR +F S++ KG   
Sbjct: 672 GFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPP 731

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  +Y  LI+  CK   + DA+ LY EML+E + P    Y+ L +G    G+L  AL + 
Sbjct: 732 NCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFIT 791

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M        S +F T + G CK G + E V+    + +      + T   ++ GL + 
Sbjct: 792 EEMIARGYAIIS-SFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEA 850

Query: 483 GRLKTACKLFHRLQHK--------------------GPIP-DVVTCSTMIHWLCKEGQMD 521
           G+L  A  +F  LQ K                    G +P DV+    MI   CK+G +D
Sbjct: 851 GKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVI--HNMIQSHCKQGYLD 908

Query: 522 KA 523
           KA
Sbjct: 909 KA 910



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 180/382 (47%), Gaps = 9/382 (2%)

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI----CGFCCVDDWKEAKC 280
           V  + ++D   K G V    E++L MKD  + P++   N L+            WK    
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRG- 232

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            F+E    G+ PDV T++ +I   CK   ++   +++E M + G + + VTYN+L+ G C
Sbjct: 233 -FME--GAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLC 289

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G I  A      M   G   D ++Y  +IN  CK  + + A CL  EM    + P+V+
Sbjct: 290 RAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVV 349

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y+TL+ G  + GN  +A K++ +M    V P+  T+   I GLCK G +  A ++ + +
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM 409

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                     TYN +I G  +    + A  L + ++  G  P+V T S +I+ LC+ G+ 
Sbjct: 410 TKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGES 469

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           ++A+ LL  M A    P+   +  L+ G+ +    S     L KM  E L   DL   + 
Sbjct: 470 ERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENL-TPDLYCYNS 528

Query: 581 VVDLLSKDKKYRECLNQFRHLL 602
           ++  LS   K  E +  +  +L
Sbjct: 529 LIIGLSNVGKMDEAIEYYDEML 550



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 138/346 (39%), Gaps = 55/346 (15%)

Query: 48  AKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL 107
           A+ L    KS N+    +      M++    P    + I++  L+ +      VS+   +
Sbjct: 597 AQILEGYFKSDNLEKVSST--LKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVI 654

Query: 108 NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
             NGL PD  +   LI+  CK      A  +L  + +    P    +N LI+G C    I
Sbjct: 655 EKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDI 714

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
             A  +F  +      PN VT+ TLI+G C+  +   A+ L+ EM+ E  A   PD   Y
Sbjct: 715 SHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVA---PDAFVY 771

Query: 228 ----------------------------------NSIIDGLCKDGFVDKAKELLLQMKDR 253
                                             N+++ G CK G + +  + L  M D+
Sbjct: 772 SVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDK 831

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
           +I P+++T  +++ G        EA  +F+E+                  N      D +
Sbjct: 832 DIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQK---------------NASHRDTDHL 876

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           + L   MI +G+ P  V +N ++   C  G + +A  L  ++V+KG
Sbjct: 877 SSLFTDMINQGLVPLDVIHN-MIQSHCKQGYLDKALMLHDALVAKG 921



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 17/263 (6%)

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  G   + N LL+ MI+    P  V           +  + RA    +S   +G R  V
Sbjct: 131 CAAGLYPQANGLLDQMIRAYPTPPLV-----------LSSVHRA----LSGSDQGRRPVV 175

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
              ++L++   K  +V D   +   M    + PS+   N LL  L +   L    K+   
Sbjct: 176 L--DVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+   + PD +T++T I+  CK   +  A +V + +R   C L + TYN LI GLC+ G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           ++ A      ++  G +PD  T   +I+ LCK G+ D+A  LL +M     +P+ V + T
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 545 LLRGFVQNNKKSKVVVLLHKMAA 567
           L+ GF++     +   ++ +M+A
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSA 376


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 234/461 (50%), Gaps = 20/461 (4%)

Query: 95  KQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTF 154
           +++D  + LFK + +    P+    N+LI   CK G    A  V   +  S   PN  T 
Sbjct: 4   RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 63

Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
           N L+ GLC  G++  A +LF+++      P   + N L+ G         A++ F+EM  
Sbjct: 64  NTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMK- 119

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
              +  +PD+ +Y+ ++  L   G + +A  L   M     +P+++TYN L+ G+C +  
Sbjct: 120 --ASGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQ 174

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
             EA+ L  E++  G +P+V T++ +IN  CK  K+++   +   MI+    P+ VT+N+
Sbjct: 175 TYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 234

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ-KVEDAVCLYREMLSE 393
           L+ GFC  G +  A +LF  M   GC+  + +YN LI++ CK +  V  AV L+ ++   
Sbjct: 235 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 294

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            + P+++TYN+L+ G  +  N  D L+L+  M      PD  T+   I GLC    V +A
Sbjct: 295 GLTPTIVTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDA 352

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
            ++F  +    C   + T+N LI GLC   +++ A  +  R+      PD+ T +T+I  
Sbjct: 353 QRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMT----APDMTTFNTIILA 405

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            CK G M  A +++ DM      P+  T   L  G +Q++K
Sbjct: 406 FCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHG-IQSSK 445



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 219/453 (48%), Gaps = 19/453 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  F  ++    +P   ++ +L+    K  Q    VS+F  + S+GL P+   +N L
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC++G  S A  +   +    F P + + N L+ G    GR +E    FK++     
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIE---FFKEMKASGV 123

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P++ +++ L++ L  +     A  LF  M       C PD++TYN ++DG CK G   +
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMT------CSPDIMTYNVLMDGYCKIGQTYE 177

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A+ L+ ++      PNV TY+ +I  +C +D  +EA  +F++M+++   P+ VTFN +I 
Sbjct: 178 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIA 237

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV-GRISRARELFVSMVSKGCR 361
             CK G ++   +L   M + G     VTYN+L+D  C   G +  A +LF  +   G  
Sbjct: 238 GFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLT 297

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
             + +YN LI      ++  D + L   M +E  +P VITYN L+SGL     + DA +L
Sbjct: 298 PTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 355

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            + M      P+  TF   I GLC    V EA  +   +        + T+N +I   CK
Sbjct: 356 FNGMA---CAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPD----MTTFNTIILAFCK 408

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            G +  A ++   +   G  P+  T   + H +
Sbjct: 409 AGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 206/405 (50%), Gaps = 15/405 (3%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A RLFK++      PN  T+N LI G C+      A+ +F +M +  G +  P+  T N
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS-GLL--PNASTMN 64

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           +++ GLC+ G +  A +L  +M+     P   ++N L+ GF       E    F EM  +
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIE---FFKEMKAS 121

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           GV+PD+ +++ +++     G+M + + L   M     +PD +TYN LMDG+C +G+   A
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEA 178

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
           + L   ++  G   +V++Y+I+IN  CK  KVE+A  ++ +M+     P+ +T+NTL++G
Sbjct: 179 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 238

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN-GFVLEAVQVFQAIRNCKCEL 467
             + G L DA+KL  +M+         T+ T ID LCK  G V  AV +F  +       
Sbjct: 239 FCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTP 298

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            I TYN LI G  +  R     +L   +  +G  PDV+T + +I  LC   +++ A  L 
Sbjct: 299 TIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF 356

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             M    C P+  TF  L+RG     K  +   +L +M A  +  
Sbjct: 357 NGMA---CAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDMTT 398



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 181/353 (51%), Gaps = 16/353 (4%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G   +  A+ FF  M      P + S+ ILL+ L+ + +     +LF  +  +   PD+ 
Sbjct: 104 GFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIM 160

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N+L++  CK+G T  A  ++  IL++ + PN  T++ +IN  C   ++ EA  +F K+
Sbjct: 161 TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM 220

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
               C PN VTFNTLI G C+      A+KLF EM  + G  CK  +VTYN++ID LCK 
Sbjct: 221 IESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM-EKIG--CKATIVTYNTLIDSLCKK 277

Query: 238 -GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G V  A +L  +++   + P ++TYNSLI GF   +   +   L   M   G +PDV+T
Sbjct: 278 RGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFS--ERANDGLRLLCHMHAEGCKPDVIT 335

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +N +I+  C   +++   RL   M      P+  T+N L+ G C   ++  AR +   M 
Sbjct: 336 YNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMT 392

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +     D+ ++N +I A CK   + DA  + ++ML     P+  T   L  G+
Sbjct: 393 AP----DMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 170/345 (49%), Gaps = 32/345 (9%)

Query: 33  KTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLA 92
           + DL S+H          L+    SG +    A++       M  SP + ++ +L+    
Sbjct: 124 EPDLESYHI--------LLSALSDSGRMAEAHALF-----SAMTCSPDIMTYNVLMDGYC 170

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           K  Q     SL K +   G  P++F  +++INC CK+     A+ V  +++ S   PN V
Sbjct: 171 KIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV 230

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL-VALKLFEE 211
           TFN LI G C  G + +A +LF ++    C   +VT+NTLI+ LC+ R  +  A+ LF +
Sbjct: 231 TFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNK 290

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE---LLLQMKDRNINPNVITYNSLICG 268
           +    GA   P +VTYNS+I      GF ++A +   LL  M      P+VITYN LI G
Sbjct: 291 LE---GAGLTPTIVTYNSLI-----QGFSERANDGLRLLCHMHAEGCKPDVITYNCLISG 342

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
            C  +  ++A+ LF  M      P+V TFN +I   C   K+++   +L+ M      PD
Sbjct: 343 LCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PD 395

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             T+N+++  FC  G +  ARE+   M+  G   + Y+   L + 
Sbjct: 396 MTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHG 440



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 6/257 (2%)

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           K D+  RL + ++     P+  TYN L+ GFC  G++ +A  +F  M S G   +  + N
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            L+   C+  ++  A+ L+REM +    P+  ++N LL G F  G    A++   +M+ +
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKAS 121

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V PD  ++   +  L  +G + EA  +F A+    C   I TYN L++G CK+G+   A
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEA 178

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
             L   +   G  P+V T S +I+  CK  ++++A ++ + M   NCVP+ VTF TL+ G
Sbjct: 179 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 238

Query: 549 FVQNNKKSKVVVLLHKM 565
           F +       + L  +M
Sbjct: 239 FCKAGMLEDAIKLFAEM 255


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 152/562 (27%), Positives = 266/562 (47%), Gaps = 33/562 (5%)

Query: 60  ITSNEAVYFFDCMIKMKPS--PGMTS-FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           ++S+     FD +   + +  P  +S F  L+   +   ++   V  F R++     P  
Sbjct: 113 LSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTA 172

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           FV N ++  L   G+   A  +  R++ +   PN  T+N L++GLC +G   +A ++F +
Sbjct: 173 FVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDE 232

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      PNV  +  L++ LC       A++L   M ++    C PD VTYN+ + GLCK
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKG---CLPDEVTYNAFLSGLCK 289

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G V++A + L+ ++D      +  Y+ LI G      + E    +  M++  + PDVV 
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  MI    + G+++     L++M ++G  PDT  YN+++   C  G + RA  L   M+
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
                 D  +  I+I   CK   V++A+ ++ EM      P+V+TYN L+ G ++ G L 
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 417 DALKLIDKMQLN-------------DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +A  L  KM++              + V DS +    +  +C++G VL+A ++ ++I + 
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                + TYN LINGLCK   L  A +LF  LQ KG  PD +T  T+I  L +  + + A
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL--------------HKMAAEK 569
             L  ++      PS   + +++R   +  K S+ + L                 +A   
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAH 649

Query: 570 LVVSDLSLSSKVVDLLSKDKKY 591
             + D SL   V +L+  D++Y
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEY 671



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 232/509 (45%), Gaps = 52/509 (10%)

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
           F  L     +    ++  F  L+    + GR  +A + F +++ F   P    +NT++  
Sbjct: 122 FDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA 181

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
           L  +   L+AL L+  MV    A C P+  TYN ++DGLCK G    A ++  +M DR I
Sbjct: 182 LVDSGVILLALALYNRMV---AAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PNV  Y  L+   C      EA  L   M D G  PD VT+NA ++  CK G++++  +
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQ 298

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
            L ++   G       Y+ L+DG     R       + +M+ +    DV  Y I+I    
Sbjct: 299 RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCA 358

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           +  ++EDA+     M  +   P    YNT+L  L   G+L  A  L  +M  N++V DS 
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T    I GLCK G V EA+Q+F  +    C+  + TYN LI+G  + GRL+ A  LFH++
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478

Query: 496 Q------------------------------------------------HKGPIPDVVTC 507
           +                                                  G +PDVVT 
Sbjct: 479 EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTY 538

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +T+I+ LCK   +D A  L  +++ K   P E+T+ TL+ G ++ ++++  ++L   +  
Sbjct: 539 NTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598

Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
                S LS+ + ++  L + KK  + +N
Sbjct: 599 SGSSPS-LSIYNSMMRSLCRMKKLSQAIN 626



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 242/548 (44%), Gaps = 46/548 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  F  M + +  P    +  +L  L  +      ++L+ R+ + G  P+    N+L+
Sbjct: 155 DAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLM 214

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G+   A  +   +L     PN   +  L++ LC  G+I EA +L   +    C 
Sbjct: 215 DGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL 274

Query: 184 PNVVTFNTLINGLCRTR----------------------------NTLVALKLFEEMVNE 215
           P+ VT+N  ++GLC+                              + L   + F+E    
Sbjct: 275 PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGY 334

Query: 216 FGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           +  + +    PDVV Y  +I G  + G ++ A   L  MK +   P+   YN+++   C 
Sbjct: 335 YKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD 394

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
             D + A  L  EM+ N +  D  T   MI   CK G +D+  ++ + M + G +P  +T
Sbjct: 395 HGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMT 454

Query: 332 YNSLMDGFCLVGRISRARELFVSM-----------VSKGCRH--DVYSYNILINANCKDQ 378
           YN+L+DGF   GR+  AR LF  M           ++ G     D  S   L++  C+  
Sbjct: 455 YNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSG 514

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +V  A  L R ++   + P V+TYNTL++GL +  NL  A++L  ++QL  + PD  T+ 
Sbjct: 515 QVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYG 574

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF-HRLQH 497
           T IDGL +     +A+ +FQ I        +  YN ++  LC+M +L  A  L+   L  
Sbjct: 575 TLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK 634

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           K   P         H   ++G +D     L+ ++ +    S   +   L G  Q  +   
Sbjct: 635 KYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDD 694

Query: 558 VVVLLHKM 565
            + + H +
Sbjct: 695 ALRIFHTL 702



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 241/536 (44%), Gaps = 54/536 (10%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A+  FD M+     P +  +T+LL+ L    + D  V L   +   G  PD    N 
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            ++ LCK+G  + AF  L  +    F      ++ LI+GL    R  E    +K +    
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+VV +  +I G         AL  F +++ + G +  PD   YN+++  LC  G ++
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALS-FLDVMKKKGFV--PDTFCYNTVLKVLCDHGDLE 399

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  L  +M   N+  +  T   +ICG C      EA  +F EM ++G  P V+T+NA+I
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNP--------------DTVTYNSLMDGFCLVGRISR 347
           +   ++G++++   L   M + G NP              D+ +   L+   C  G++ +
Sbjct: 460 DGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLK 518

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A +L  S++  G   DV +YN LIN  CK + ++ AV L++E+  + I P  ITY TL+ 
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF---------- 457
           GL +     DA+ L   +  +   P    + + +  LC+   + +A+ ++          
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNF 638

Query: 458 ----QAIRNCKCELRIET----------------------YNCLINGLCKMGRLKTACKL 491
               + + N   E+   +                      Y   + GLC++ R   A ++
Sbjct: 639 PVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRI 698

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           FH LQ  G       C+ +I++LC +  ++ A D++L   +K+ + S+     LLR
Sbjct: 699 FHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLR 754



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 206/454 (45%), Gaps = 13/454 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E   ++  M++   SP +  +TI++   A+  + +  +S    +   G  PD F  N +
Sbjct: 329 DEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTV 388

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC  G    A  +   +L++    ++ T   +I GLC  G + EA ++F ++    C
Sbjct: 389 LKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGC 448

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFE--EMVNE--------FGAICKPDVVTYNSIID 232
           DP V+T+N LI+G  R      A  LF   EM N          GA    D  +   ++ 
Sbjct: 449 DPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVH 508

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
            +C+ G V KA +LL  + D  + P+V+TYN+LI G C   +   A  LF E+   G+ P
Sbjct: 509 DMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D +T+  +I+   +  + +    L + ++Q G +P    YNS+M   C + ++S+A  L+
Sbjct: 569 DEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628

Query: 353 VSMVSKGCRHDVYSYNILINAN--CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +  + K     V S  +L NA+   +D  ++D V    ++  E    S   Y   L GL 
Sbjct: 629 LDYLPKKYNFPVES-EVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLC 687

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           QV    DAL++   +Q   +       A  I+ LC +  +  AV +     +    L   
Sbjct: 688 QVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQP 747

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
             N L+  LC   R + A  L  R+   G   DV
Sbjct: 748 VGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDV 781



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 142/353 (40%), Gaps = 54/353 (15%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV---- 118
           +EA+  FD M +    P + ++  L+    +  + +    LF ++   G  P LF+    
Sbjct: 434 DEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSLFLRLTL 492

Query: 119 ----------LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
                     L  L++ +C+ G    A+ +L  I+ S   P+ VT+N LINGLC    + 
Sbjct: 493 GANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
            A RLFK+L +    P+ +T+ TLI+GL R      A+ LF+ ++    +   P +  YN
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS---PSLSIYN 609

Query: 229 SIIDGLCK------------------------------------DGFVDKAKELLLQMKD 252
           S++  LC+                                    DG +D     L+++  
Sbjct: 610 SMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQ 669

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
              + +   Y   + G C V    +A  +F  + + G+         +INY C D  ++ 
Sbjct: 670 EYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNA 729

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
              ++   + + +       N L+   C+  R   A+ L   M   G   DVY
Sbjct: 730 AVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDVY 782


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 244/524 (46%), Gaps = 23/524 (4%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + EA      M +   +P + + T ++    K  +    + + + +   G  P+++  N 
Sbjct: 127 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 186

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+   C  G    A  +L ++      P+ VT+N LI G C +G I  A RL + +    
Sbjct: 187 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 246

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              +  T+N LIN LC+   T  A  LF+ +  E   I KP+ VT+NS+I+GLCK G  D
Sbjct: 247 LIADQYTYNALINALCKDGRTDQACSLFDSL--ETRGI-KPNAVTFNSLINGLCKSGKAD 303

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A + L +M      P+  TY+S I   C +   +E      EM+   V+P  V +  +I
Sbjct: 304 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 363

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   K+     V R    M+  G NPD VTY + M  +C+ GR++ A  + + M   G  
Sbjct: 364 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 423

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL--------------- 406
            D  +YN L++ +    + + AV + ++M S    P+  TY  LL               
Sbjct: 424 VDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPL 483

Query: 407 --SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
             +G+++   L D   L D M+ N+ +P+S T+++ ++G  ++G   EA  +   ++   
Sbjct: 484 TPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDS 543

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
             L  + Y  L+   CK  R   A  L   +   G IP +++   ++  L  EGQ DKA 
Sbjct: 544 ISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAK 603

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS---KVVVLLHKM 565
           ++ ++   K+  P E+ +  ++ G ++        +++++L +M
Sbjct: 604 EIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERM 647



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 215/438 (49%), Gaps = 7/438 (1%)

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           ++RS + P+  TFN LI G C   ++  A  LF K+ +     +VV++ TLI GLC    
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
                   +E V  FG + +PD+  Y +++ GLC     ++   +L +MK+    P+   
Sbjct: 61  -------IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRA 113

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y +++   C     KEA+ +  EM + G+ P VVT  A+IN  CK+G+M    R+LELM 
Sbjct: 114 YAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 173

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            RG  P+  TYN+L+ GFC  G++ +A  L   M + G   D  +YN+LI   C D  +E
Sbjct: 174 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIE 233

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A  L R M  + +     TYN L++ L + G    A  L D ++   + P++ TF + I
Sbjct: 234 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 293

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           +GLCK+G    A +  + + +  C     TY+  I  LCKM   +        +  K   
Sbjct: 294 NGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVK 353

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P  V  + +IH L KE           +M +  C P  VT+ T +R +    + ++   +
Sbjct: 354 PSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENV 413

Query: 562 LHKMAAEKLVVSDLSLSS 579
           L +M+   + V  ++ ++
Sbjct: 414 LMEMSKNGVTVDTMAYNT 431



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 258/542 (47%), Gaps = 27/542 (4%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            FD M     +  + S+  L+  L +  + D  V LF  ++     PD+ +   L+  LC
Sbjct: 32  LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLC 87

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
                    ++L R+    + P+T  +  +++  C E +  EA  + +++      P VV
Sbjct: 88  NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 147

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T   +IN  C+      AL++ E M       CKP+V TYN+++ G C +G V KA  LL
Sbjct: 148 TCTAVINAYCKEGRMSDALRVLELMKLRG---CKPNVWTYNALVQGFCNEGKVHKAMTLL 204

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD-NGVQPDVVTFNAMINYNCK 306
            +M+   +NP+ +TYN LI G  C+D   E+    + +M+ +G+  D  T+NA+IN  CK
Sbjct: 205 NKMRACGVNPDAVTYNLLIRG-QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 263

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           DG+ D+   L + +  RG+ P+ VT+NSL++G C  G+   A +    MVS GC  D Y+
Sbjct: 264 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYT 323

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y+  I   CK +  ++ +    EML + ++PS + Y  ++  L +  N G   +   +M 
Sbjct: 324 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 383

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            +   PD  T+ T +   C  G + EA  V   +      +    YN L++G   +G+  
Sbjct: 384 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 443

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCK-----------EGQMDKANDL-----LLDM 530
            A  +  ++     +P+  T   ++  L +              + KA +L     L D+
Sbjct: 444 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 503

Query: 531 EAKN-CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
             KN  +P+  T+ ++L GF ++ +  +   L+  M  + + +++  + + +V    K K
Sbjct: 504 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNE-DIYTALVTCFCKSK 562

Query: 590 KY 591
           +Y
Sbjct: 563 RY 564



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 192/488 (39%), Gaps = 90/488 (18%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L+       +    ++L  ++ + G+ PD    NLLI   C  G    AF +
Sbjct: 179 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 238

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  +       +  T+N LIN LC +GR  +A  LF  L      PN VTFN+LINGLC+
Sbjct: 239 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-------- 250
           +    +A K  E+MV+   A C PD  TY+S I+ LCK     +    + +M        
Sbjct: 299 SGKADIAWKFLEKMVS---AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS 355

Query: 251 ------------KDRNI---------------NPNVITYNSLICGFCCVDDWKEAKCLFI 283
                       K+RN                NP+V+TY + +  +C      EA+ + +
Sbjct: 356 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 415

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDG----------------------------------- 308
           EM  NGV  D + +N +++ +   G                                   
Sbjct: 416 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 475

Query: 309 -----------------KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
                            ++  V  L ++M +    P++ TY+S+++GF   GR   A  L
Sbjct: 476 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 535

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
              M       +   Y  L+   CK ++  DA  L   M+     P +++Y  LLSGL  
Sbjct: 536 VSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLIC 595

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            G    A ++    +  D  PD   +   IDGL K G    + ++   +    C    +T
Sbjct: 596 EGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQT 655

Query: 472 YNCLINGL 479
           Y  L   L
Sbjct: 656 YAMLTEEL 663



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 5/282 (1%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M++ G  PD  T+NSL+ G+C   ++  AR+LF  M  +G   DV SY  LI   C+  +
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +++AV L+ EM     +P +  Y  L+ GL       + L ++ +M+     P +  +A 
Sbjct: 61  IDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +D  C+     EA ++ Q +        + T   +IN  CK GR+  A ++   ++ +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
             P+V T + ++   C EG++ KA  LL  M A    P  VT+  L+RG   +       
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 560 VLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            LL  M  + L+    + ++ +++ L KD +  +  + F  L
Sbjct: 237 RLLRLMEGDGLIADQYTYNA-LINALCKDGRTDQACSLFDSL 277



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 150/323 (46%), Gaps = 14/323 (4%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S E + F   M++    P   ++TI++  L K + Y  V   +  + S+G  PD+     
Sbjct: 337 SQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTT 396

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            +   C  G  + A  VL  + ++  T +T+ +N L++G  + G+   A  + K++   A
Sbjct: 397 SMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVA 456

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFE-------EMVNEFGA--ICK-----PDVVTY 227
             PN  T+  L+  L R R     L L         E+ + FG   + K     P+  TY
Sbjct: 457 SVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 516

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           +SI++G  +DG  ++A  L+  MK+ +I+ N   Y +L+  FC    + +A  L   M+ 
Sbjct: 517 SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQ 576

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           +G  P ++++  +++    +G+ DK   +      +  +PD + +  ++DG    G    
Sbjct: 577 HGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDI 636

Query: 348 ARELFVSMVSKGCRHDVYSYNIL 370
           +RE+ + +    CR    +Y +L
Sbjct: 637 SREMIIMLERMNCRPSHQTYAML 659


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 222/441 (50%), Gaps = 14/441 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           +F  +L  LA+ +    +  ++  +     + PD+    +L+N LCK G    A  VL  
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 142 ILRSCF--TPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLINGLC 197
           + R      P+ VT N +++GLC  GR+ EA    ++   +V  C PN VT+N LI+  C
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R  N  +A +L E+M NE       ++VT N+I+ GLC+ G    A E   +   R + P
Sbjct: 258 RVGNISMAYELVEKMENEG---VPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWP 312

Query: 258 ----NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
               N +TY++L+      ++   A  LF E M  G  PD + +  MI+   + G+++  
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             +   M + G   DT  YN L+ GFC   R+  A EL   M   G R DV +YN L++ 
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
           +CK         L  +M+ +  +PSVIT+ TL+ G  +VG + +AL+++  M  + + P+
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
           +  + T ID LCK G V  A+++F  ++       + T+N L+ GL      + A +L  
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMD 552

Query: 494 RLQHKGPIPDVVTCSTMIHWL 514
           +++ +   PD VT   ++ WL
Sbjct: 553 QMREERCFPDYVTVDVLMEWL 573



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 235/474 (49%), Gaps = 23/474 (4%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT--PNTVTFNFLINGLCAEGRIMEAAR 172
           D+F  N ++  L ++    G   +   +++ C +  P+ VT+  L+NGLC  GR+ +A R
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYA-LMQGCASVRPDVVTYGILVNGLCKAGRVGDALR 193

Query: 173 LFKKLNVFACD--PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
           +   ++    D  P+VVT NT+++GLC++     AL   E+ ++     C P+ VTYN +
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHG-CPPNTVTYNCL 252

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC-------CVDDWKEAKCLFI 283
           ID  C+ G +  A EL+ +M++  +  N++T N+++ G C        ++ ++E + ++ 
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           E   N      VT++ ++        +     L    +  G +PD + Y +++ G    G
Sbjct: 313 EGKGN-----AVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAG 367

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           R+  A  +  SM   G + D  +YNILI   C+ +++ +A  L +EM    IRP V TYN
Sbjct: 368 RLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYN 427

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TLLSG  + G+     +L+ KM  +   P   TF T + G CK G + EA+++ +++   
Sbjct: 428 TLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDES 487

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                   YN LI+ LCK G +  A +LF  ++ K    +V T + ++  L  +   +KA
Sbjct: 488 GIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFV-----QNNKKSKVVVLLHKMAAEKLVV 572
            +L+  M  + C P  VT   L+          NN + K+ V     + E+  V
Sbjct: 548 FELMDQMREERCFPDYVTVDVLMEWLPVIELQGNNCQGKLCVAEDGASGERKAV 601



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 207/424 (48%), Gaps = 10/424 (2%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V  FN+++  L R R+     +++  M  +  A  +PDVVTY  +++GLCK G V  A 
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALM--QGCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 245 ELL--LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD--NGVQPDVVTFNAM 300
            +L  +  +D +I P+V+T N+++ G C     +EA     + M   +G  P+ VT+N +
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS--MVSK 358
           I+  C+ G +     L+E M   GV  + VT N+++ G C  GR   A E F     V  
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
             + +  +Y+ L+ A      V  A+ L+ E +SE   P  I Y T++SGL Q G L DA
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             +   M+      D+  +   I G C+   + EA ++ Q ++       + TYN L++G
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            CK G      +L  ++   G  P V+T  T++H  CK G++D+A  +L  M+     P+
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD--KKYRECLN 596
            V + TL+    +       + L  +M  + +  +  + ++ +  L  K+  +K  E ++
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMD 552

Query: 597 QFRH 600
           Q R 
Sbjct: 553 QMRE 556



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 199/395 (50%), Gaps = 11/395 (2%)

Query: 56  KSGNITSNEAVYFFDCMIK--MKPSPGMTSFTILLTMLAKNKQYDTVVSLF-KRLNS-NG 111
           K+G +   +A+   D M +  +   P + +   ++  L K+ +    ++   +R++S +G
Sbjct: 184 KAGRV--GDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHG 241

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
             P+    N LI+  C++G  S A+ ++ ++       N VT N ++ GLC  GR   A 
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301

Query: 172 RLFKKLNVFACDP--NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
             F++      +   N VT++TL+  L  T N  +A++LF E ++E  +   PD + Y +
Sbjct: 302 EFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHS---PDAIMYFT 358

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I GL + G ++ A  +   MK+     +   YN LI GFC      EA  L  EM + G
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++PDV T+N +++ +CK G    V+ LL  MI  G  P  +T+ +L+ G+C VG+I  A 
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            +  SM   G   +   YN LI+  CK   V+ A+ L+ EM  + +  +V T+N LL GL
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
                   A +L+D+M+     PD  T    ++ L
Sbjct: 539 RDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 237/471 (50%), Gaps = 9/471 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGL-FPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           SF ++     K    +  + LF R++      P +   N ++N + + G    A      
Sbjct: 109 SFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNH 168

Query: 142 ILRS---CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           ++ +      PN ++FN +I  +C  G +  A  LF+++ V  C P+  T+ TL++GLC+
Sbjct: 169 VVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCK 228

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A+ L +EM  E    C P   T+N +I+GLCK G   +  +L+  M  +   PN
Sbjct: 229 VDRIDEAVSLLDEMQIEG---CFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPN 285

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +TYN+LI G C      +A  L   M+ +   P+ VT+  +IN   K G+     R+L 
Sbjct: 286 EVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLV 345

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           LM +RG   +   Y+ L+ G    G+   A  LF   + KGC+ +   Y+ L++  C+D+
Sbjct: 346 LMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDR 405

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K ++A+ +  EM  +   P+  T+++L+ G F+VGN   A+++   M   +   +   ++
Sbjct: 406 KPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYS 465

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I GLCK+G V+EA+ V+  +    C   +  Y+ +I GLC  G ++ A KL++ +   
Sbjct: 466 VLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCL 525

Query: 499 GP--IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
            P   PDV+T + + + LCK+  + +A DLL  M  + C P  VT    LR
Sbjct: 526 EPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLR 576



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 233/471 (49%), Gaps = 28/471 (5%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + SF +++  + K    D  + LF+ +      PD +    L++ LCK+     A  +
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238

Query: 139 LGRI-LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           L  + +  CF P+  TFN LINGLC +G      +L   + +  C PN VT+NTLI+GLC
Sbjct: 239 LDEMQIEGCF-PSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 297

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                  AL L + MV+   + C P+ VTY +II+GL K G       +L+ M++R    
Sbjct: 298 LKGKLDKALSLLDRMVS---SKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIV 354

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N   Y+ L+ G       +EA  LF E MD G + + V ++A+++  C+D K D+  ++L
Sbjct: 355 NEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKIL 414

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M  +G  P+  T++SLM GF  VG   +A E++  M    C  +   Y++LI+  CKD
Sbjct: 415 SEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKD 474

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL--NDVVPDSF 435
            KV +A+ ++ +ML+   RP V+ Y++++ GL   G++ +ALKL ++M     D  PD  
Sbjct: 475 GKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVI 534

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC--------------------- 474
           T+    + LCK   +  AV +  ++ +  C+  + T N                      
Sbjct: 535 TYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDE 594

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           L+  L K  R   A K+   +  K   P   T + ++H LC+  ++    D
Sbjct: 595 LVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVID 645



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 194/366 (53%), Gaps = 5/366 (1%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL---LLQMKDRNINPNVIT 261
           A++LF  M  EF   CKP V ++NS+++ + + GF D+A E    ++  KD NI PNV++
Sbjct: 126 AIELFYRMSFEF--YCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLS 183

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +N +I   C +     A  LF EM      PD  T+  +++  CK  ++D+   LL+ M 
Sbjct: 184 FNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQ 243

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             G  P   T+N L++G C  G  +R  +L  +M  KGC  +  +YN LI+  C   K++
Sbjct: 244 IEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 303

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A+ L   M+S +  P+ +TY T+++GL + G   D  +++  M+    + + + ++  +
Sbjct: 304 KALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLV 363

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            GL K G   EA+++F+   +  C+L    Y+ L++GLC+  +   A K+   +  KG  
Sbjct: 364 SGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCA 423

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P+  T S+++    + G   KA ++  DM   NC  +EV +  L+ G  ++ K  + +++
Sbjct: 424 PNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMV 483

Query: 562 LHKMAA 567
             KM A
Sbjct: 484 WAKMLA 489



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 147/292 (50%), Gaps = 3/292 (1%)

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMI---QRGVNPDTVTYNSLMDGFCLVGRISR 347
           +P V +FN+++N   + G  D+       ++      + P+ +++N ++   C +G +  
Sbjct: 140 KPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDN 199

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A ELF  M  + C  D Y+Y  L++  CK  ++++AV L  EM  E   PS  T+N L++
Sbjct: 200 AIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLIN 259

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           GL + G+     KL+D M L   VP+  T+ T I GLC  G + +A+ +   + + KC  
Sbjct: 260 GLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVP 319

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
              TY  +INGL K GR     ++   ++ +G I +    S ++  L KEG+ ++A  L 
Sbjct: 320 NEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLF 379

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            +   K C  + V +  L+ G  ++ K  + + +L +M  +    +  + SS
Sbjct: 380 KESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSS 431



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 147/262 (56%), Gaps = 11/262 (4%)

Query: 346 SRARELFVSMVSK-GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER---IRPSVIT 401
           ++A ELF  M  +  C+  V S+N ++N   +    + A+  Y  ++  +   I P+V++
Sbjct: 124 NKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLS 183

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           +N ++  + ++G + +A++L  +M +   VPD++T+ T +DGLCK   + EAV +   ++
Sbjct: 184 FNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQ 243

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
              C     T+N LINGLCK G      KL   +  KG +P+ VT +T+IH LC +G++D
Sbjct: 244 IEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 303

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK---SKVVVLLHKMAAEKLVVSDLSLS 578
           KA  LL  M +  CVP+EVT+ T++ G V+  +    ++V+VL+     E+  + +  + 
Sbjct: 304 KALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLME----ERGYIVNEYVY 359

Query: 579 SKVVDLLSKDKKYRECLNQFRH 600
           S +V  L K+ K  E +  F+ 
Sbjct: 360 SVLVSGLFKEGKSEEAMRLFKE 381



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 30/200 (15%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           S++A+  +  M K+  +     +++L+  L K+ +    + ++ ++ + G  PD+   + 
Sbjct: 442 SHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSS 501

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNT----VTFNFLINGLCAEGRIMEAARLFKKL 177
           +I  LC  G    A  +   +L  C  P++    +T+N L N LC +  I  A  L   +
Sbjct: 502 MIQGLCDAGSVEEALKLYNEML--CLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSM 559

Query: 178 NVFACDPNVVTFN---------------------TLINGLCRTRNTLVALKLFEEMVNEF 216
               CDP++VT N                      L+  L + +  L A K+ E M+ +F
Sbjct: 560 LDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKF 619

Query: 217 GAICKPDVVTYNSIIDGLCK 236
                P   T+  ++  LC+
Sbjct: 620 ---LSPKASTWARVVHELCQ 636


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 217/415 (52%), Gaps = 4/415 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+  +F  L+ G C EGR  EA  L   +       +  T   ++   CR         L
Sbjct: 179 PDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGL 238

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F  MV E G    P+VV Y + +DGLCK G+V +A  +L +M  + + PNV T+ SLI G
Sbjct: 239 FGRMV-EMGN--PPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 269 FCCVDDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            C +   + A  LF++++  +  +P+V T+  MI   CK+GK+ +   LL  M+++G+ P
Sbjct: 296 LCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           +T TY +L+DG C  G   RA EL   M  +G   ++Y+YN +I   CK  K++ A  + 
Sbjct: 356 NTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL 415

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           R   S+ + P  +TY  L++   + G++  AL L ++M  N   PD  T+ T I   C+ 
Sbjct: 416 RMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQ 475

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             + ++ Q+F    +       +TY  +I G C++G+  +A K+F R+   G +PD +T 
Sbjct: 476 RQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITY 535

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
             +I  LCKE ++++A  L   M  K+ VP +VT  TL   + + +K +  V  L
Sbjct: 536 GALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFL 590



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 198/386 (51%), Gaps = 2/386 (0%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           M   P   SF  L+    +  +++   +L   +   G   D     +++   C+ G    
Sbjct: 175 MGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRD 234

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
              + GR++     PN V +   ++GLC  G + +A  + +++      PNV T  +LI+
Sbjct: 235 VPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLID 294

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           GLC+   T  A +LF ++V    +  KP+V TY  +I G CK+G + +A+ LL +M ++ 
Sbjct: 295 GLCKIGWTERAFRLFLKLVKS--SSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 352

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TY +LI G C    +  A  L  +M   G  P++ T+NA+I   CK GK+ +  
Sbjct: 353 LAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAY 412

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           ++L +   +G+ PD VTY  L+   C  G I+ A +LF  M    C  D+ +Y  +I   
Sbjct: 413 KVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMY 472

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C+ +++E +  L+ + LS  + P+  TY ++++G  +VG    ALK+ ++M  +  +PD 
Sbjct: 473 CQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDP 532

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAI 460
            T+   I GLCK   + EA  +F+ +
Sbjct: 533 ITYGALISGLCKESRLEEARALFETM 558



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 7/324 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++   +P   ++T L+    +   +D    L  ++   G  P+++  N +I   CK G 
Sbjct: 348 MVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGK 407

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A+ VL         P+ VT+  LI   C +G I  A  LF ++   +C P++ T+ T
Sbjct: 408 IQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTT 467

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I   C+ R    + +LF++ ++  G +  P   TY S+I G C+ G    A ++  +M 
Sbjct: 468 IIAMYCQQRQMEQSQQLFDKCLS-IGLV--PTKQTYTSMIAGYCRVGKSTSALKVFERMV 524

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                P+ ITY +LI G C     +EA+ LF  M+D  + P  VT   +    C+  K  
Sbjct: 525 QHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTT 584

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
                L+ + +R         ++L+     V  +  A     +++ K    D  +Y   I
Sbjct: 585 IAVSFLDGLDKR---QQAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFI 641

Query: 372 NANCKDQKVEDAVCLYREMLSERI 395
           N +C +           E +S+RI
Sbjct: 642 N-SCYESNRYALASEISEKISKRI 664



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 14/227 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    + +  K G+IT   A+  F+ M +    P + ++T ++ M  + +Q +    
Sbjct: 426 DKVTYTMLITEHCKQGHITY--ALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQ 483

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF +  S GL P       +I   C++G ++ A  V  R+++    P+ +T+  LI+GLC
Sbjct: 484 LFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLC 543

Query: 163 AEGRIMEAARLFKKL---NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
            E R+ EA  LF+ +   ++  CD   VT  TL    CR   T +A+   + +     A 
Sbjct: 544 KESRLEEARALFETMLDKHMVPCD---VTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAH 600

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
               +V   S +D L      D A   L  + D++   +  TY S I
Sbjct: 601 AADALVRKLSAVDNL------DAASLFLKNVLDKHYAVDHATYTSFI 641


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 258/501 (51%), Gaps = 29/501 (5%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILR--SCFTPNTVTFNFLINGLCAEGRIMEAAR 172
           D    N +I   C+ G+ + AF  L  +++  +CF  +T+T N L+ G C  G      R
Sbjct: 76  DTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCF--DTITCNILVKGFCRIGLAKYGER 133

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           +   L       +V+ FNTLI+G C+     +AL L E M  E G +   D+V+YN++I+
Sbjct: 134 IMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKE-GLLS--DIVSYNTLIN 190

Query: 233 GLCKDGFVDKAKELLLQM-------------------KDRNIN--PNVITYNSLICGFCC 271
           G CK G  DKAK LL ++                   KD N+N   ++ITY ++I  +C 
Sbjct: 191 GFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCK 250

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
               +EA+ L+ EM+ NG  PDVVT+++++N  CKDG++ +   LL  M + GV+P+ V 
Sbjct: 251 QHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVA 310

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y +L+D     G    A      +V +G   D+     L++   K  K ++A  ++R + 
Sbjct: 311 YTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALS 370

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
              + P+ ITY  L+ G  +VG++     L+ +M+   + P+  T+++ I+G  K G + 
Sbjct: 371 KLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILD 430

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           EA+ V + + +         Y  LI+G CK G+ + A  L++ ++  G   + V    ++
Sbjct: 431 EAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLV 490

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           + L +  +MD+A +LL D+ ++  +   V + +L+ GF +  K+S  + ++ +M  EK +
Sbjct: 491 NNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEM-TEKSI 549

Query: 572 VSDLSLSSKVVDLLSKDKKYR 592
             D+   + +++ L +  KY 
Sbjct: 550 PFDVVTYNVLINGLLEHGKYE 570



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 250/506 (49%), Gaps = 25/506 (4%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSN---------------------GLFPDLFVL 119
           + S+  L+    K  +YD   SL   ++ +                      L  DL   
Sbjct: 182 IVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITY 241

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
             +I+  CK      A  +   ++ + F P+ VT++ ++NGLC +GR+ EA  L +++  
Sbjct: 242 TTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKK 301

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
              DPN V + TLI+ L +  +   A     ++V     +   D+V   +++DGL K   
Sbjct: 302 MGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTL---DLVMCTTLVDGLFKSSK 358

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
             +A+++   +   N+ PN ITY +LI G+C V D +  + L  EM +  + P+V+T+++
Sbjct: 359 PKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSS 418

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +IN   K G +D+   +++ M+ + + P+   Y  L+DG+C  G+   A +L+  M   G
Sbjct: 419 IINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSG 478

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
            + +   +++L+N   + +++++A  L +++ S  +    + Y +L+ G F+ G    AL
Sbjct: 479 LKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAAL 538

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            ++++M    +  D  T+   I+GL ++G   EA  V+  +          TYN +I   
Sbjct: 539 NMVEEMTEKSIPFDVVTYNVLINGLLEHG-KYEAKSVYSGMIEMGLAPNQATYNIMIKAY 597

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK G L  A +L++ ++    +P  +TC+T++  L + G+++KA ++L +M      P+ 
Sbjct: 598 CKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNL 657

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKM 565
           V    LL    ++ K + V+ +  ++
Sbjct: 658 VIHRVLLNASSKSGKANAVLQMHEQL 683



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 255/521 (48%), Gaps = 62/521 (11%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   L S G   D+   N LI+  CK G  S A  ++ R+ +     + V++N LING C
Sbjct: 134 IMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFC 193

Query: 163 AEGRIMEAARLF---------------------KKLNVFACDPNVVTFNTLINGLCRTRN 201
             G   +A  L                      KK +    + +++T+ T+I+  C+   
Sbjct: 194 KRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHG 253

Query: 202 TLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
              A  L+EEM +N F     PDVVTY+SI++GLCKDG + +A+ELL +MK   ++PN +
Sbjct: 254 LEEARALYEEMIINGF----LPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHV 309

Query: 261 TYNSLI----------CGFCC-------------------VDDW------KEAKCLFIEM 285
            Y +LI            F C                   VD        KEA+ +F  +
Sbjct: 310 AYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRAL 369

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
               + P+ +T+ A+I+  CK G M++V  LL+ M ++ +NP+ +TY+S+++G+   G +
Sbjct: 370 SKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGIL 429

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A  +   M+ +    + Y Y ILI+  CK  K E A  LY EM    ++ + + ++ L
Sbjct: 430 DEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVL 489

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           ++ L +   + +A +L+  +    ++ D   + + +DG  K G    A+ + + +     
Sbjct: 490 VNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSI 549

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
              + TYN LINGL + G+ + A  ++  +   G  P+  T + MI   CK+G++D A +
Sbjct: 550 PFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALE 608

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
           L  +M++   +PS +T  TL+ G  +  +  K + +L++M+
Sbjct: 609 LWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMS 649



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 160/608 (26%), Positives = 278/608 (45%), Gaps = 76/608 (12%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   ++ MI     P + +++ ++  L K+ +      L + +   G+ P+      LI
Sbjct: 256 EARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLI 315

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L K G    AF    +++    T + V    L++GL    +  EA  +F+ L+     
Sbjct: 316 DSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLI 375

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN +T+  LI+G C+  +      L +EM  +      P+V+TY+SII+G  K G +D+A
Sbjct: 376 PNSITYTALIDGYCKVGDMERVESLLQEMEEKH---INPNVITYSSIINGYTKKGILDEA 432

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             ++ +M D+NI PN   Y  LI G+C     + A  L+ EM  +G++ + V F+ ++N 
Sbjct: 433 INVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVN- 491

Query: 304 NCKDGK-MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           N K GK MD+   LL+ +  RG+  D V Y SLMDGF   G+ S A  +   M  K    
Sbjct: 492 NLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPF 551

Query: 363 DVYSYNILIN----------------------------------ANCKDQKVEDAVCLYR 388
           DV +YN+LIN                                  A CK  ++++A+ L+ 
Sbjct: 552 DVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWN 611

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM S +I PS IT NTL+ GL + G +  A+ ++++M +  + P+       ++   K+G
Sbjct: 612 EMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSG 671

Query: 449 FVLEAVQVFQAIRNCK---------------CELRIE--------------------TYN 473
                +Q+ + + +                 C LR+                     TYN
Sbjct: 672 KANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYN 731

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI G C+   +K A   + ++ ++G  P++VT + ++  L   G M + ++L   M+  
Sbjct: 732 ALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKEN 791

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL--LSKDKKY 591
              P   T+ TL+ G+ +   K + + L  +M A+  V    + +  + D   + K  + 
Sbjct: 792 GLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQA 851

Query: 592 RECLNQFR 599
           RE LN+ +
Sbjct: 852 RELLNEMQ 859



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 250/569 (43%), Gaps = 78/569 (13%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F  + K+   P   ++T L+    K    + V SL + +    + P++   + +I
Sbjct: 361 EAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSII 420

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N   K GI   A  V+ ++L     PN   +  LI+G C  G+   A  L+ ++ +    
Sbjct: 421 NGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLK 480

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEE-------------------------------M 212
            N V F+ L+N L R +    A +L ++                               M
Sbjct: 481 VNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNM 540

Query: 213 VNEFGAICKP-DVVTYNSIIDGL----------------------------------CKD 237
           V E      P DVVTYN +I+GL                                  CK 
Sbjct: 541 VEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQ 600

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G +D A EL  +MK   I P+ IT N+L+ G     + ++A  +  EM   G+ P++V  
Sbjct: 601 GELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIH 660

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
             ++N + K GK + V ++ E ++  G+  +   YN+L+  FC +    +A  +   M+ 
Sbjct: 661 RVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIR 720

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            G   D  +YN LI   C+   V+ A+  Y +ML+E + P+++TYN LL GL   G + +
Sbjct: 721 DGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAE 780

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
             +L DKM+ N + PD+ T+ T I G  K G   E+++++  +       +  TYN LI+
Sbjct: 781 RDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLIS 840

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI-HW--LCKEGQMDK---------AND 525
              K+G++  A +L + +Q +G  P   T   +I  W  L K   +D+         A +
Sbjct: 841 DFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKN 900

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           L+ +M  K  VP + T   +   F +  K
Sbjct: 901 LITEMNDKGFVPCKSTIACISSTFARPGK 929



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 186/381 (48%), Gaps = 20/381 (5%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P ++ +N +I      G V +  ++  +M    + PNV T+N L+  +C + +      L
Sbjct: 8   PTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNL----IL 63

Query: 282 FIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
            ++++ N  V+ D VT+N +I   C+ G +++    L +M+++    DT+T N L+ GFC
Sbjct: 64  ALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFC 123

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
            +G       +  ++VS G   DV  +N LI+  CK  ++  A+ L   M  E +   ++
Sbjct: 124 RIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIV 183

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YNTL++G  + G    A  L+ ++  +  V DS  F   ID   K              
Sbjct: 184 SYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFN--IDDRIKKD------------ 229

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
            N   E  + TY  +I+  CK   L+ A  L+  +   G +PDVVT S++++ LCK+G++
Sbjct: 230 DNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRL 289

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
            +A +LL +M+     P+ V + TL+    +     +      ++    + + DL + + 
Sbjct: 290 SEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTL-DLVMCTT 348

Query: 581 VVDLLSKDKKYRECLNQFRHL 601
           +VD L K  K +E  + FR L
Sbjct: 349 LVDGLFKSSKPKEAEDMFRAL 369



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 3/223 (1%)

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M +  + P  + +N L+  F   G +S+  +++  M+      +VY++N+L++A CK   
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
           +  A+ L R +    +    +TYNT++ G  Q G +  A   +  M   D   D+ T   
Sbjct: 61  LILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            + G C+ G      ++   + +      +  +N LI+G CK G +  A  L  R++ +G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            + D+V+ +T+I+  CK G+ DKA  LL ++     V   V F
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFF 220


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 222/425 (52%), Gaps = 3/425 (0%)

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           G++    R F+++     +  V +   +++GLC+  +  +  KL +E+  +     K +V
Sbjct: 208 GQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKG---VKANV 264

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           VTYN+ I+G  K   +    E+L  M+   +  NV+TY  LI GF  +   +EA+ LF E
Sbjct: 265 VTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEE 324

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M + G++ DV  + ++I+ NC+ G + +   L + M  +G+ P   TY +L+ G C  G+
Sbjct: 325 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQ 384

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A+ L   M  KG   +   +N LI+  C+   V++A+ L   M  + +   V  YN+
Sbjct: 385 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 444

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           + SGL ++    +A  L+  M    V P++ +F T ID  CK G  +EA +VF+ +    
Sbjct: 445 IASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 504

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I TYN LI+G  K G +K A KL   L+++G IPDV TC+++IH  C +G++D A 
Sbjct: 505 NVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMAL 564

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            L  +M  +  VP+ VT+  ++ G  ++ +  +   L  +M    L   D   SS V  L
Sbjct: 565 KLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624

Query: 585 LSKDK 589
            S D+
Sbjct: 625 HSADE 629



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 203/409 (49%), Gaps = 32/409 (7%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF  M+ +     + S TI+L  L K    +    L   + + G+  ++   N  I    
Sbjct: 216 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF 275

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K     G   +L  + +     N VT+  LI+G    G+I EA RLF+++     + +V 
Sbjct: 276 KRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 335

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNE--------FGA----ICKP------------- 222
            + ++I+  CR+ N   AL LF+EM ++        +GA    +CK              
Sbjct: 336 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 395

Query: 223 -------DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                  + V +N++IDG C+ G VD+A  L + M+ + +  +V  YNS+  G C ++  
Sbjct: 396 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 455

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            EAK L   M++ GV P+ ++F  +I+  CK+G   +  R+   M ++G  P+ +TYN L
Sbjct: 456 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +DG+   G +  A +L   + ++G   DVY+   LI+  C D KV+ A+ L+ EM    +
Sbjct: 516 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 575

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            P+V+TY  ++SGL + G   +A KL D+M+   + PD   +++ +  L
Sbjct: 576 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 176/345 (51%), Gaps = 3/345 (0%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL+ FE M  +   I +   + Y   +  L + G VD       +M + ++   V +   
Sbjct: 178 ALEAFEHMEKKGFHIDERSCLVY---LLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 234

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           ++ G C   D +  + L  E+   GV+ +VVT+NA I    K   +  V  +L LM + G
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           V  + VTY  L+ GF  +G+I  A+ LF  M  KG   DVY Y  +I+ NC+   V+ A+
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ EM  + + PS  TY  L+ G+ + G +  A  L+++MQ   +  +   F T IDG 
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C++G V EA+++   +     E  +  YN + +GLCK+ R   A  L   +  +G  P+ 
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 474

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++ +T+I   CKEG   +A  +  +ME K  VP+ +T+  L+ G+
Sbjct: 475 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY 519



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 9/239 (3%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F  L+    ++   D  + L   +   GL  D+F  N + + LCK+     A  +L  ++
Sbjct: 407 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 466

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
               +PNT++F  LI+  C EG  +EA R+F+++      PN++T+N LI+G  +  N  
Sbjct: 467 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 526

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A KL +E+ N  G I  PDV T  S+I G C DG VD A +L  +M  R + PNV+TY 
Sbjct: 527 EAHKLKDELENR-GLI--PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYT 583

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           ++I G       +EA  L+ EM + G+ PD   +++++      G +   +  + + IQ
Sbjct: 584 AMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV------GSLHSADESISMQIQ 636



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 140/296 (47%), Gaps = 1/296 (0%)

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           + G++D   R    M+   V     +   ++DG C  G +   R+L   + +KG + +V 
Sbjct: 206 RGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVV 265

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +YN  I    K   +     +   M  E +  +V+TY  L+ G   +G + +A +L ++M
Sbjct: 266 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 325

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +   +  D + + + I   C++G V  A+ +F  + +        TY  LI+G+CK G++
Sbjct: 326 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 385

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A  L + +Q KG   + V  +T+I   C+ G +D+A  L + ME K        + ++
Sbjct: 386 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI 445

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             G  + N+K +   LL  M    +  + +S ++ ++D+  K+  + E    FR +
Sbjct: 446 ASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT-LIDIYCKEGNFVEAKRVFREM 500



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 3/172 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA      M++   SP   SFT L+ +  K   +     +F+ +   G  P++   N+L
Sbjct: 456 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K G    A  +   +      P+  T   LI+G C +G++  A +LF ++     
Sbjct: 516 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 575

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            PNVVT+  +I+GL +   +  A KL++EM  E G    PD   Y+S++  L
Sbjct: 576 VPNVVTYTAMISGLSKDGRSEEAFKLYDEM-KETG--LTPDDTVYSSLVGSL 624


>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 603

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 235/491 (47%), Gaps = 61/491 (12%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNG-LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           L +L KN + D      + + + G + P +     LI+  CK+G T  A  ++G +  S 
Sbjct: 120 LHVLIKNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEESG 179

Query: 147 FTPNTVTFNF---------LINGLCAEGRIMEAARLFKKLNV------------------ 179
              +   +NF         LI G C  G + EA R+   ++V                  
Sbjct: 180 AVIDITIYNFFCLPKKNNVLIGGYCXSGEVEEALRVLDCMSVSPNGINYDTILRSLCDRC 239

Query: 180 --------------FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
                           C P+VVT+  LI+  C+      A+KL  EMV++    CKP+VV
Sbjct: 240 KLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKE---CKPNVV 296

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TYN++I G+C +G +D+    L  +      P+VI+Y  ++        W +A  L   M
Sbjct: 297 TYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASM 356

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           +  G   +VVTFN +IN+ C+ G + K   +LE++ +    P++++YN  + GFC     
Sbjct: 357 LCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFC----- 411

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
           +        MVS+GC  D+ +YNIL+ A CKD+KV+DAV + +++  + ++P VITY+ +
Sbjct: 412 NEKSXYLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSII 471

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           + GL +VG    AL+L+++     + P+  TF + + G+ + G V EA+++F  +     
Sbjct: 472 IDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGI 531

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                 YN +I GLCK  +    CK           P   T + ++  +  EG   +A+ 
Sbjct: 532 RPNAFAYNLIIMGLCKTQQTSRGCK-----------PTEATYNILVKGITSEGXPKEASK 580

Query: 526 LLLDMEAKNCV 536
           L  ++ +K  V
Sbjct: 581 LWSELYSKGPV 591



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 190/407 (46%), Gaps = 22/407 (5%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN- 263
           A +  E M N+   +  P V+   ++I   CK G    A  ++  +++     ++  YN 
Sbjct: 132 ASRFLEYMTNKGNIM--PCVIACTALISEFCKIGRTKNATRIMGILEESGAVIDITIYNF 189

Query: 264 --------SLICGFCCVDDWKEAKCLFIEMMD-NGVQPDVVTFNAMINYNCKDGKMDKVN 314
                    LI G+C   + +EA    + ++D   V P+ + ++ ++   C   K+ +  
Sbjct: 190 FCLPKKNNVLIGGYCXSGEVEEA----LRVLDCMSVSPNGINYDTILRSLCDRCKLKQGM 245

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            +L+  +Q    PD VTY  L+D  C   R+ +A +L + MVSK C+ +V +YN LI   
Sbjct: 246 EVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGI 305

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C + ++++ +   + + S   +P VI+Y  +L  L   G   DA+KL+  M       + 
Sbjct: 306 CNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNV 365

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            TF T I+ LC+ G + +A  V + I    C     +YN  I G C              
Sbjct: 366 VTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFC-----NEKSXYLEI 420

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +  +G  PD+VT + ++  LCK+ ++D A ++L  +  K   P  +T+  ++ G ++  K
Sbjct: 421 MVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGK 480

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
               + LL +   + L  + ++ +S VV  +S+  K  E +  F  L
Sbjct: 481 TDLALELLEEACTKGLKPNLITFTS-VVGGISRKGKVHEAIKIFHFL 526


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 217/411 (52%), Gaps = 4/411 (0%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           +++ +L+  L +   +D V  +F  + S+G  PD  +L  L+  + +         +L  
Sbjct: 74  STYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAE 133

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +       N+  +N L++ L  + ++ EA  LFK+  V    P+  TFN LI GLCR   
Sbjct: 134 VQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGG 193

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR-NINPNVI 260
              A ++F++M   FG  C PDVVTYN++I+GLCK   V +  EL  +++ R + +P+++
Sbjct: 194 VDRAFEVFKDM-ESFG--CLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIV 250

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY S+I GFC     KEA  LF EMM +G+QP+V+TFN +I+   K G + +   +   M
Sbjct: 251 TYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKM 310

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
                + D VT+ SL+DG+C  G+++   + +  M ++     VY+Y +LINA CK+ ++
Sbjct: 311 AYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRL 370

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
            +A     ++ +  I P    YN ++ G  + GN+ +   ++ +M+     PD  TF   
Sbjct: 371 NEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTIL 430

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           I G C  G + EA+ +F  +   +C     T N LI+ L K G    A ++
Sbjct: 431 IIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRI 481



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 194/388 (50%), Gaps = 2/388 (0%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
           FD M      P       L+T +A+   +D V  L   +    +  + FV N L++ L K
Sbjct: 96  FDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVK 155

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
                 A  +    L     P+T TFN LI GLC  G +  A  +FK +  F C P+VVT
Sbjct: 156 QNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVT 215

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +NTLINGLC+        +LF+E+ +   + C PD+VTY SII G CK G + +A  L  
Sbjct: 216 YNTLINGLCKANEVQRGCELFKEIQSR--SDCSPDIVTYTSIISGFCKSGKMKEASNLFE 273

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M    I PNVIT+N LI GF  + +  EA+ ++ +M       DVVTF ++I+  C+ G
Sbjct: 274 EMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAG 333

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           +++   +   +M  R V+P   TY  L++  C   R++ AR+    + +       + YN
Sbjct: 334 QVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYN 393

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            +I+  CK   V++   + +EM  +R  P  +T+  L+ G    G + +A+ + ++M   
Sbjct: 394 PVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLAT 453

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQV 456
              PD+ T  + I  L K G   EA ++
Sbjct: 454 RCAPDNITVNSLISCLLKAGMPNEAYRI 481



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 203/405 (50%), Gaps = 4/405 (0%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           NLL+  LC+MG      +V   +      P++    FL+  +          +L  ++  
Sbjct: 77  NLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQG 136

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
                N   +N L++ L +      A+ LF+E +        PD  T+N +I GLC+ G 
Sbjct: 137 KEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLV---MQSPPDTWTFNILIRGLCRVGG 193

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFN 298
           VD+A E+   M+     P+V+TYN+LI G C  ++ +    LF E+       PD+VT+ 
Sbjct: 194 VDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYT 253

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++I+  CK GKM + + L E M++ G+ P+ +T+N L+DGF  +G I+ A  ++  M   
Sbjct: 254 SIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYF 313

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
            C  DV ++  LI+  C+  +V   +  +  M +  + P+V TY  L++ L +   L +A
Sbjct: 314 DCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEA 373

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
              + +++ + ++P  F +   IDG CK G V E   + + +   +C+    T+  LI G
Sbjct: 374 RDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIG 433

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
            C  GR+  A  +F+R+      PD +T +++I  L K G  ++A
Sbjct: 434 HCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEA 478



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 214/421 (50%), Gaps = 9/421 (2%)

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           + +E +RL   LNV  C     T+N L+  LC+  +  +   +F+ M ++ G +  PD  
Sbjct: 58  KFLEFSRL--NLNVNHC---YSTYNLLMRSLCQMGHHDLVNIVFDYMGSD-GHL--PDSK 109

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
               ++  + +    D  K+LL +++ + +  N   YN+L+      +   EA  LF E 
Sbjct: 110 LLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEY 169

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           +     PD  TFN +I   C+ G +D+   + + M   G  PD VTYN+L++G C    +
Sbjct: 170 LVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEV 229

Query: 346 SRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
            R  ELF  + S+  C  D+ +Y  +I+  CK  K+++A  L+ EM+   I+P+VIT+N 
Sbjct: 230 QRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNV 289

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L+ G  ++GN+ +A  +  KM   D   D  TF + IDG C+ G V   ++ +  ++   
Sbjct: 290 LIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRN 349

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               + TY  LIN LCK  RL  A     ++++   IP     + +I   CK G +D+ N
Sbjct: 350 VSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGN 409

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            +L +ME K C P +VTF  L+ G     +  + + + ++M A +    +++++S +  L
Sbjct: 410 VILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCL 469

Query: 585 L 585
           L
Sbjct: 470 L 470



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 171/333 (51%), Gaps = 4/333 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+Y F   + M+  P   +F IL+  L +    D    +FK + S G  PD+   N L
Sbjct: 160 HEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTL 219

Query: 123 INCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           IN LCK         +   I  RS  +P+ VT+  +I+G C  G++ EA+ LF+++    
Sbjct: 220 INGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSG 279

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             PNV+TFN LI+G  +  N   A  ++ +M       C  DVVT+ S+IDG C+ G V+
Sbjct: 280 IQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAY---FDCSADVVTFTSLIDGYCRAGQVN 336

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
              +    MK RN++P V TY  LI   C  +   EA+    ++ ++ + P    +N +I
Sbjct: 337 HGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVI 396

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK G +D+ N +L+ M ++  +PD VT+  L+ G C+ GR+  A  +F  M++  C 
Sbjct: 397 DGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCA 456

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
            D  + N LI+   K     +A  + +  L +R
Sbjct: 457 PDNITVNSLISCLLKAGMPNEAYRIRKMALEDR 489



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 90/202 (44%)

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYN L+  L Q+G+      + D M  +  +PDS      +  + +        ++   +
Sbjct: 75  TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           +  +  +    YN L++ L K  ++  A  LF         PD  T + +I  LC+ G +
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
           D+A ++  DME+  C+P  VT+ TL+ G  + N+  +   L  ++ +      D+   + 
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254

Query: 581 VVDLLSKDKKYRECLNQFRHLL 602
           ++    K  K +E  N F  ++
Sbjct: 255 IISGFCKSGKMKEASNLFEEMM 276


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 152/562 (27%), Positives = 266/562 (47%), Gaps = 33/562 (5%)

Query: 60  ITSNEAVYFFDCMIKMKPS--PGMTS-FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           ++S+     FD +   + +  P  +S F  L+   +   ++   V  F R++     P  
Sbjct: 113 LSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTA 172

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           FV N ++  L   G+   A  +  R++ +   PN  T+N L++GLC +G   +A ++F +
Sbjct: 173 FVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDE 232

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      PNV  +  L++ LC       A++L   M ++    C PD VTYN+ + GLCK
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKG---CLPDEVTYNAFLSGLCK 289

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G V++A + L+ ++D      +  Y+ LI G      + E    +  M++  + PDVV 
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  MI    + G+++     L++M ++G  PDT  YN+++   C  G + RA  L   M+
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
                 D  +  I+I   CK   V++A+ ++ EM      P+V+TYN L+ G ++ G L 
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 417 DALKLIDKMQLN-------------DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +A  L  KM++              + V DS +    +  +C++G VL+A ++ ++I + 
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                + TYN LINGLCK   L  A +LF  LQ KG  PD +T  T+I  L +  + + A
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL--------------HKMAAEK 569
             L  ++      PS   + +++R   +  K S+ + L                 +A   
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAH 649

Query: 570 LVVSDLSLSSKVVDLLSKDKKY 591
             + D SL   V +L+  D++Y
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEY 671



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 229/495 (46%), Gaps = 52/495 (10%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           ++  F  L+    + GR  +A + F +++ F   P    +NT++  L  +   L+AL L+
Sbjct: 136 SSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALY 195

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
             MV    A C P+  TYN ++DGLCK G    A ++  +M DR I PNV  Y  L+   
Sbjct: 196 NRMV---AAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C      EA  L   M D G  PD VT+NA ++  CK G++++  + L ++   G     
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
             Y+ L+DG     R       + +M+ +    DV  Y I+I    +  ++EDA+     
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M  +   P    YNT+L  L   G+L  A  L  +M  N++V DS T    I GLCK G 
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ------------- 496
           V EA+Q+F  +    C+  + TYN LI+G  + GRL+ A  LFH+++             
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 497 -----------------------------------HKGPIPDVVTCSTMIHWLCKEGQMD 521
                                                G +PDVVT +T+I+ LCK   +D
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A  L  +++ K   P E+T+ TL+ G ++ ++++  ++L   +       S LS+ + +
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS-LSIYNSM 611

Query: 582 VDLLSKDKKYRECLN 596
           +  L + KK  + +N
Sbjct: 612 MRSLCRMKKLSQAIN 626



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 242/548 (44%), Gaps = 46/548 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  F  M + +  P    +  +L  L  +      ++L+ R+ + G  P+    N+L+
Sbjct: 155 DAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLM 214

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G+   A  +   +L     PN   +  L++ LC  G+I EA +L   +    C 
Sbjct: 215 DGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL 274

Query: 184 PNVVTFNTLINGLCRTR----------------------------NTLVALKLFEEMVNE 215
           P+ VT+N  ++GLC+                              + L   + F+E    
Sbjct: 275 PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGY 334

Query: 216 FGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           +  + +    PDVV Y  +I G  + G ++ A   L  MK +   P+   YN+++   C 
Sbjct: 335 YKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD 394

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
             D + A  L  EM+ N +  D  T   MI   CK G +D+  ++ + M + G +P  +T
Sbjct: 395 HGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMT 454

Query: 332 YNSLMDGFCLVGRISRARELFVSM-----------VSKGCRH--DVYSYNILINANCKDQ 378
           YN+L+DGF   GR+  AR LF  M           ++ G     D  S   L++  C+  
Sbjct: 455 YNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSG 514

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +V  A  L R ++   + P V+TYNTL++GL +  NL  A++L  ++QL  + PD  T+ 
Sbjct: 515 QVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYG 574

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF-HRLQH 497
           T IDGL +     +A+ +FQ I        +  YN ++  LC+M +L  A  L+   L  
Sbjct: 575 TLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK 634

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           K   P         H   ++G +D     L+ ++ +    S   +   L G  Q  +   
Sbjct: 635 KYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDD 694

Query: 558 VVVLLHKM 565
            + + H +
Sbjct: 695 ALRIFHTL 702



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 241/536 (44%), Gaps = 54/536 (10%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A+  FD M+     P +  +T+LL+ L    + D  V L   +   G  PD    N 
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            ++ LCK+G  + AF  L  +    F      ++ LI+GL    R  E    +K +    
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+VV +  +I G         AL  F +++ + G +  PD   YN+++  LC  G ++
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALS-FLDVMKKKGFV--PDTFCYNTVLKVLCDHGDLE 399

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  L  +M   N+  +  T   +ICG C      EA  +F EM ++G  P V+T+NA+I
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNP--------------DTVTYNSLMDGFCLVGRISR 347
           +   ++G++++   L   M + G NP              D+ +   L+   C  G++ +
Sbjct: 460 DGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLK 518

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A +L  S++  G   DV +YN LIN  CK + ++ AV L++E+  + I P  ITY TL+ 
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF---------- 457
           GL +     DA+ L   +  +   P    + + +  LC+   + +A+ ++          
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNF 638

Query: 458 ----QAIRNCKCELRIET----------------------YNCLINGLCKMGRLKTACKL 491
               + + N   E+   +                      Y   + GLC++ R   A ++
Sbjct: 639 PVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRI 698

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           FH LQ  G       C+ +I++LC +  ++ A D++L   +K+ + S+     LLR
Sbjct: 699 FHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLR 754



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 206/454 (45%), Gaps = 13/454 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E   ++  M++   SP +  +TI++   A+  + +  +S    +   G  PD F  N +
Sbjct: 329 DEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTV 388

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC  G    A  +   +L++    ++ T   +I GLC  G + EA ++F ++    C
Sbjct: 389 LKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGC 448

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFE--EMVNE--------FGAICKPDVVTYNSIID 232
           DP V+T+N LI+G  R      A  LF   EM N          GA    D  +   ++ 
Sbjct: 449 DPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVH 508

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
            +C+ G V KA +LL  + D  + P+V+TYN+LI G C   +   A  LF E+   G+ P
Sbjct: 509 DMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D +T+  +I+   +  + +    L + ++Q G +P    YNS+M   C + ++S+A  L+
Sbjct: 569 DEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628

Query: 353 VSMVSKGCRHDVYSYNILINAN--CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +  + K     V S  +L NA+   +D  ++D V    ++  E    S   Y   L GL 
Sbjct: 629 LDYLPKKYNFPVES-EVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLC 687

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           QV    DAL++   +Q   +       A  I+ LC +  +  AV +     +    L   
Sbjct: 688 QVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQP 747

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
             N L+  LC   R + A  L  R+   G   DV
Sbjct: 748 VGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDV 781



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 141/353 (39%), Gaps = 54/353 (15%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV---- 118
           +EA+  FD M +    P + ++  L+    +  + +    LF ++   G  P LF+    
Sbjct: 434 DEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSLFLRLTL 492

Query: 119 ----------LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
                     L  L++ +C+ G    A+ +L  I+ S   P+ VT+N LINGLC    + 
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
            A RLFK+L +    P+ +T+ TLI+GL R      A+ LF+ ++    +   P +  YN
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS---PSLSIYN 609

Query: 229 SIIDGLCK------------------------------------DGFVDKAKELLLQMKD 252
           S++  LC+                                    DG +D     L+++  
Sbjct: 610 SMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQ 669

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
                +   Y   + G C V    +A  +F  + + G+         +INY C D  ++ 
Sbjct: 670 EYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNA 729

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
              ++   + + +       N L+   C+  R   A+ L   M   G   DVY
Sbjct: 730 AVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDVY 782


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 237/497 (47%), Gaps = 33/497 (6%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           T+  IL + L K +Q+     LF ++  +G+  D +V    I   C+     GA  ++ R
Sbjct: 165 TASQILFS-LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVR 223

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +       + V +N L+ GLC   R+ EA  +   +       + VT+ TL+ G CR   
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 202 TLVALKLFEEMV-------------------------NEFGAICK-------PDVVTYNS 229
             +AL++  +M+                           F   CK       P+V  YN+
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +ID LCK+   D A  L  +M  R + PN +TY  LI   C     ++A CLF +M D G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++  V  +N++IN  CK G +D+   LL  M++ G+ P   +Y+ L+ G C  G +S   
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           EL   M  +G   + Y++  LIN  CKD+K+++A  L+ +M+   + P+ +T+N ++ G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
             VGN+  A +L D+M    + PD++T+ + I GLC    V +A +    + N    L  
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            +   L+ G  + GR      L+  +  +G   D+V+ + +++   K+   +K+  L  +
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 530 MEAKNCVPSEVTFCTLL 546
           M+ +   P ++ +  ++
Sbjct: 644 MKEQGVKPDDIFYTCMI 660



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 240/503 (47%), Gaps = 37/503 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L+  L KN+++D    LFK +   GL P+     +LI+ LCK G+   A  +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++           +N LING C +G +  A  L   +      P   +++ LI GLCR
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +    ++L  EM     A    +  T+ ++I+G CKD  +D+A  L  +M D N+ PN
Sbjct: 456 NGDLSSCMELHREMAERGIAW---NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +T+N +I G+C V + ++A  L+ +M++ G++PD  T+ ++I+  C    + K N  + 
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            +       +  +  +L+ GF   GR +    L+  M  +G + D+ S+ I++ A  K  
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
             E +  L+REM  + ++P  I Y  ++  L +  N+  AL   D+M ++   P++ T  
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 692

Query: 439 TYIDGLCKNGFVLEA-----------VQVFQAIRNCKCEL-------------------- 467
             I+ LCK+G++  A           V   +   NC  +                     
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 752

Query: 468 ---RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I ++N LI GLCK G+++ A  L  ++   G  PD ++ ST+IH LCK G ++KA 
Sbjct: 753 HLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAF 812

Query: 525 DLLLDMEAKNCVPSEVTFCTLLR 547
           +L  +M  K   P  V +   +R
Sbjct: 813 ELWNEMLYKGLKPDVVAYNIFIR 835



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 237/500 (47%), Gaps = 3/500 (0%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N+   EAV   + M+ +  +    ++  L+    + ++ +  + +   +   G  P    
Sbjct: 246 NMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 305

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            + +I+ L K  +   AF +  ++      PN   +N LI+ LC   R  +A RLFK++ 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +PN VT+  LI+ LC+      AL LF++M ++     K  V  YNS+I+G CK G
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG---IKVTVYPYNSLINGYCKQG 422

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +D+A+ LL  M    + P   +Y+ LI G C   D      L  EM + G+  +  TF 
Sbjct: 423 SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFT 482

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+IN  CKD KMD+  RL + MI   V P+ VT+N +++G+CLVG I +A +L+  MV  
Sbjct: 483 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM 542

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G + D Y+Y  LI+  C    V  A     ++ +     +  +   LL G F+ G   + 
Sbjct: 543 GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTET 602

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L D+M +  V  D  +F   +    K     ++  +F+ ++    +     Y C+I+ 
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L K   +  A   + ++   G  P+ VT + +I+ LCK G +  A  L  +M A N +P+
Sbjct: 663 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 539 EVTFCTLLRGFVQNNKKSKV 558
           + T+   L  F       K 
Sbjct: 723 KFTYNCFLDYFATEGDMEKA 742



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 151/521 (28%), Positives = 232/521 (44%), Gaps = 39/521 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  M      P   ++ IL+  L K    +  + LF ++   G+   ++  N L
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSL 414

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTP--------------------------------- 149
           IN  CK G    A  +L  +++   TP                                 
Sbjct: 415 INGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGI 474

Query: 150 --NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
             N  TF  LING C + ++ EAARLF K+      PN VTFN +I G C   N   A +
Sbjct: 475 AWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQ 534

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L+++MV E G   KPD  TY S+I GLC    V KA E +  +++     N  +  +L+ 
Sbjct: 535 LYDQMV-EMG--LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GF     + E   L+ EM   GV+ D+V+F  ++    K    +K   L   M ++GV P
Sbjct: 592 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D + Y  ++D       + +A   +  MV  G   +  ++ +LIN  CK   +  A  L 
Sbjct: 652 DDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLC 711

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           +EML+  + P+  TYN  L      G++  A  L   M L   +    +F   I GLCK 
Sbjct: 712 KEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKA 770

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + EA+ +   I          +Y+ +I+ LCKMG +  A +L++ + +KG  PDVV  
Sbjct: 771 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           +  I W    G+ DKA  +  +M      P+  T+  LL G
Sbjct: 831 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 230/493 (46%), Gaps = 38/493 (7%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VLG  L S  T N  T + ++  L    +   A  LF K+       +   +   I   C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            +RN   A  L   M +E     K   V YN ++ GLCK+  V +A E+   M +  +  
Sbjct: 210 ESRNLDGARGLVVRMESEG---VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTA 266

Query: 258 NVITYNSLICGFCCVDDWK-----------------EAKCLFI----------------- 283
           + +TY +L+ GFC +++ +                 EA C F+                 
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 326

Query: 284 -EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            ++ D G+ P+V  +NA+I+  CK+ + D  +RL + M  RG+ P+ VTY  L+   C  
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G I  A  LF  M  KG +  VY YN LIN  CK   ++ A  L   M+ E + P+  +Y
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           + L++GL + G+L   ++L  +M    +  +++TF   I+G CK+  + EA ++F  + +
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                   T+N +I G C +G ++ A +L+ ++   G  PD  T  ++I  LC    + K
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           AN+ + D+E    V +  +   LL GF +  + ++   L  +MA   + +  +S +  V 
Sbjct: 567 ANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 626

Query: 583 DLLSKDKKYRECL 595
             L +  K + C+
Sbjct: 627 AALKQHDKEKSCV 639



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 176/413 (42%), Gaps = 9/413 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   FD MI     P   +F +++              L+ ++   GL PD +    L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC     S A   +  +  S    N  +   L+ G   EGR  E   L+ ++ V   
Sbjct: 555 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             ++V+F  ++    +  +   +  LF EM  E G   KPD + Y  +ID L K+  + +
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREM-KEQGV--KPDDIFYTCMIDALSKEENMIQ 671

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A     QM     +PN +T+  LI   C       A+ L  EM+   V P+  T+N  ++
Sbjct: 672 ALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLD 731

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
           Y   +G M+K   L   M+Q G     V++N L+ G C  G+I  A +L   +   G   
Sbjct: 732 YFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSP 790

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D  SY+ +I+  CK   +  A  L+ EML + ++P V+ YN  +      G    AL + 
Sbjct: 791 DCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIY 850

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             M  + V P+  T+   + G+      L     F   R  K  ++I  Y  +
Sbjct: 851 TNMIRSGVQPNWDTYRALLSGIS-----LMLHYDFSCFRGTKQYIQISVYELM 898



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 166/349 (47%), Gaps = 1/349 (0%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I  N  T + ++     +  +  A+ LF +M+ +GV  D   + A I   C+   +D  
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L+  M   GV    V YN LM G C   R+  A E+   MV+ G   D  +Y  L+  
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C+ +++E A+ +  +M+     PS    + ++  L +   + +A  L  K+    +VP+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            F +   ID LCKN    +A ++F+ +     E    TY  LI+ LCK G ++ A  LF 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           +++ KG    V   +++I+  CK+G +D+A  LL  M  +   P+  ++  L+ G  +N 
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             S  + L  +MA   +  ++ + ++ +++   KDKK  E    F  ++
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTA-LINGFCKDKKMDEAARLFDKMI 505



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 6/297 (2%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           S+   L    + G  T  E  + +D M        + SFTI++    K    +    LF+
Sbjct: 585 SLTALLYGFFREGRFT--ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 642

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            +   G+ PD      +I+ L K      A     +++   ++PNTVT   LIN LC  G
Sbjct: 643 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSG 702

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
            +  A  L K++      PN  T+N  ++      +   A  L   M+    A     +V
Sbjct: 703 YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA----SIV 758

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           ++N +I GLCK G + +A +L+ ++ +   +P+ I+Y+++I   C + D  +A  L+ EM
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 818

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
           +  G++PDVV +N  I +    G+ DK   +   MI+ GV P+  TY +L+ G  L+
Sbjct: 819 LYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/555 (26%), Positives = 268/555 (48%), Gaps = 70/555 (12%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV     M +    P + S+  LL+   K  ++   + L   +   G+  D+   N+ I
Sbjct: 193 KAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFI 252

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC+   ++  ++VL ++     TPN V++N LING   EG+I  A R+F ++      
Sbjct: 253 DSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLS 312

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEM---------------VNEFGAICKPDV---- 224
           PN++T+N LING C   N   AL+L + M               +N      K DV    
Sbjct: 313 PNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNI 372

Query: 225 -------------VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
                        +++  +IDGLC++G +D+A +LL++M    + P++IT++ LI GFC 
Sbjct: 373 LERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCK 432

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN--------------------------- 304
           V +  +AK +  ++   G  P+ V F+ +I YN                           
Sbjct: 433 VGNLNKAKEVMSKIYREGFVPNNVIFSTLI-YNSCKVGNVYEGMKFYAAMNLNGQNADNF 491

Query: 305 ---------CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
                    C++GK+ +    L  + + G+ P++VT++ +++G+  VG  S A  +F  M
Sbjct: 492 TCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKM 551

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +S G     ++Y  L+   CK Q   +A  L +++    +    I+YNTL+  + + GNL
Sbjct: 552 ISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNL 611

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG-FVLEAVQVFQAIRNCKCELRIETYNC 474
            +A++L ++M  N+++PDS+T+   + GL + G  V   + + + ++     L    Y C
Sbjct: 612 LEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTC 671

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
            I+GL K G+ K A  LF  ++ KG   D++  +++     + G++  A+ L+     KN
Sbjct: 672 FIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKN 731

Query: 535 CVPSEVTFCTLLRGF 549
            +P+  TF  LL G+
Sbjct: 732 VIPNLTTFNILLHGY 746



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 270/573 (47%), Gaps = 38/573 (6%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            AV  F  M+     P + +  +++  + KN +   V   FK++ ++ + P++   N+LI
Sbjct: 123 HAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILI 182

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC  G    A  +L  + R+ + P  V++N L++  C +GR   A  L   +      
Sbjct: 183 SVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQ 242

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            +V T+N  I+ LCR   +     + ++M N+   +  P+ V+YN++I+G  K+G +  A
Sbjct: 243 ADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK---MITPNEVSYNTLINGFVKEGKIGVA 299

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  +M + N++PN+ITYN LI G+C   +++EA  L   M  N V+P+ VT   ++N 
Sbjct: 300 TRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNG 359

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K  K D    +LE       + + +++  ++DG C  G +  A +L + M   G   D
Sbjct: 360 LYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPD 419

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + ++++LIN  CK   +  A  +  ++  E   P+ + ++TL+    +VGN+ + +K   
Sbjct: 420 IITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYA 479

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M LN    D+FT  + +  LC+NG ++EA +    I          T++C+ING   +G
Sbjct: 480 AMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVG 539

Query: 484 RLKTACKLFHRL----QHKGP----------------------------IP---DVVTCS 508
               A  +F ++     H  P                            IP   D ++ +
Sbjct: 540 DGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYN 599

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I  + K G + +A  L  +M   N +P   T+  +L G ++  +     + L ++  +
Sbjct: 600 TLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQK 659

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +++  +  + +  +D L K  + +  L  F+ +
Sbjct: 660 EILTLNSIVYTCFIDGLFKAGQSKAALYLFKEM 692



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 263/592 (44%), Gaps = 58/592 (9%)

Query: 65  AVYFFDCMIK---MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-----NSNGLFPDL 116
           A+ F   +IK   ++P+       I   +L + + Y    S+ K L      SN LF  L
Sbjct: 35  ALKFLKWVIKQPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNFLFGVL 94

Query: 117 F-----------VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
                       V +LLI    + G+   A      +L   F P+  T N ++  +    
Sbjct: 95  MDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNC 154

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLC------------------------RTRN 201
           R       FK++      PNV +FN LI+ LC                         + N
Sbjct: 155 RAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYN 214

Query: 202 TLV-----------ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           TL+           AL L   M  E   I + DV TYN  ID LC++    +   +L +M
Sbjct: 215 TLLSWCCKKGRFKFALVLIHHM--ECKGI-QADVCTYNMFIDSLCRNSRSAQGYLVLKKM 271

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
           +++ I PN ++YN+LI GF        A  +F EM++  + P+++T+N +IN  C +G  
Sbjct: 272 RNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNF 331

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           ++  RLL++M    V P+ VT  +L++G     +   AR +           +  S+ ++
Sbjct: 332 EEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVM 391

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+  C++  +++A  L  EM  + + P +IT++ L++G  +VGNL  A +++ K+     
Sbjct: 392 IDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGF 451

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           VP++  F+T I   CK G V E ++ + A+          T N L+  LC+ G+L  A +
Sbjct: 452 VPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEE 511

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
             H +   G +P+ VT   +I+     G    A  +   M +    PS  T+ +LL+   
Sbjct: 512 FLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLC 571

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +     +   LL K+    L V  +S ++ +V+ +SK     E +  F  ++
Sbjct: 572 KGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE-ISKSGNLLEAVRLFEEMI 622



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 134/587 (22%), Positives = 249/587 (42%), Gaps = 79/587 (13%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S T+++  L +N   D    L   +  +G++PD+   ++LIN  CK+G  + A  V+ +I
Sbjct: 387 SHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKI 446

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV-------FACD------------ 183
            R  F PN V F+ LI   C  G + E  + +  +N+       F C+            
Sbjct: 447 YREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKL 506

Query: 184 ----------------PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC--KPDVV 225
                           PN VTF+ +ING     +   A  +F++M++     C   P   
Sbjct: 507 VEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMIS-----CGHHPSPF 561

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TY S++  LCK     +A++LL ++    +  + I+YN+LI       +  EA  LF EM
Sbjct: 562 TYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEM 621

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV-NPDTVTYNSLMDGFCLVGR 344
           + N + PD  T+  +++   ++G++      L  ++Q+ +   +++ Y   +DG    G+
Sbjct: 622 IQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQ 681

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
              A  LF  M  KG   D+ + N + +   +  KV  A  L  +  ++ + P++ T+N 
Sbjct: 682 SKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNI 741

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           LL G  +  ++    KL + M+ +   P+  T+ + I GLC +G +   +++ +      
Sbjct: 742 LLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAES 801

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQ---------------------------- 496
             +   T+N LI   C++  L     L H ++                            
Sbjct: 802 STIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYF 861

Query: 497 -------HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
                   KG IP      TM+  +C+ G +  A  L   M A      +   C ++RG 
Sbjct: 862 VFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGL 921

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
               K  + + +L +M   K + +  + ++ ++ +  K   ++E  N
Sbjct: 922 ALCGKIEEAMWILQRMLRMKKIPTTSTFTT-LMHVFCKKDNFKEAHN 967



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 128/562 (22%), Positives = 235/562 (41%), Gaps = 68/562 (12%)

Query: 87   LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
            L+  L +N +          ++  GL P+    + +IN    +G  SGAF V  +++   
Sbjct: 496  LVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCG 555

Query: 147  FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
              P+  T+  L+  LC      EA +L KKL+      + +++NTLI  + ++ N L A+
Sbjct: 556  HHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAV 615

Query: 207  KLFEEMVNE----------------------------FGAICKPDVVTYNSI-----IDG 233
            +LFEEM+                               G + + +++T NSI     IDG
Sbjct: 616  RLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDG 675

Query: 234  LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            L K G    A  L  +M+++ ++ ++I  NS+  G+  +     A  L  +  +  V P+
Sbjct: 676  LFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPN 735

Query: 294  VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            + TFN +++   +   +    +L  LM + G  P+ +TY+SL+ G C  G +    ++  
Sbjct: 736  LTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK 795

Query: 354  SMVSKGCRHDVYSYNILINANCK---------------------DQKVEDAV-------- 384
              +++    D  ++N+LI   C+                     D+  + AV        
Sbjct: 796  MFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRM 855

Query: 385  ------CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
                      EML +   P+   Y T++  + +VG++  A KL D+M    +  D     
Sbjct: 856  VSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAEC 915

Query: 439  TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
              + GL   G + EA+ + Q +   K      T+  L++  CK    K A  L   ++H 
Sbjct: 916  AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975

Query: 499  GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
                D+V  + +I   C  G +  A D   +++ K  +P+  T+  L+      +  S+ 
Sbjct: 976  RVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRG 1035

Query: 559  VVLLHKMAAEKLVVSDLSLSSK 580
             ++L  +    LV   L   S+
Sbjct: 1036 EIVLKDLNDRGLVSGYLDGKSQ 1057



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 153/361 (42%), Gaps = 38/361 (10%)

Query: 84   FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
            +T  +  L K  Q    + LFK +   GL  DL  LN + +   +MG    A  ++ +  
Sbjct: 669  YTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTR 728

Query: 144  RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
                 PN  TFN L++G      IM   +L+  +      PN +T+++LI GLC      
Sbjct: 729  NKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLE 788

Query: 204  VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL----------------- 246
            + +K+ +  + E   I   D +T+N +I   C+   +DK  +L                 
Sbjct: 789  LGIKMLKMFIAESSTI---DDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQK 845

Query: 247  ------------------LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
                              + +M  +   P    Y +++   C V D + A  L  +M+  
Sbjct: 846  AVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVAL 905

Query: 289  GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
            G+  D     AM+      GK+++   +L+ M++    P T T+ +LM  FC       A
Sbjct: 906  GISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEA 965

Query: 349  RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
              L + M     + D+ +YN+LI+A C +  V  A+  Y E+  + + P++ TY  L+S 
Sbjct: 966  HNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSA 1025

Query: 409  L 409
            +
Sbjct: 1026 I 1026


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 255/513 (49%), Gaps = 18/513 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P  +++T ++T L + K+ D    LF+ +   G+ PD++   +LI+  CK G+
Sbjct: 443 MMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGL 502

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A      +  +  +PN VT+  L++      ++ +A  +F ++   AC PN +T++ 
Sbjct: 503 IEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSA 562

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAI-------------CKPDVVTYNSIIDGLCKDG 238
           LI+GLC+      A +++ +++     I               P+VVTY ++++GLCK  
Sbjct: 563 LIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQ 622

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V  A +LL  M      PN I Y++L+ GFC V +   A+ +F+ M   G  P V T+ 
Sbjct: 623 KVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYT 682

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++I+   KDG++D   ++L  M++   NP+ VTY +++DG C  G   +A  L   M  K
Sbjct: 683 SLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKK 742

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  +V +Y  LI+   K  KV+  + L+ +M ++   P+ +TY  L++     G L DA
Sbjct: 743 GCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDA 802

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L+D+M+          + T + G  K    L ++ + + + +         Y  LI+ 
Sbjct: 803 HLLLDEMKQTHWPKYLQGYRTTVQGFSKR--FLASLGLLEEMESHDTAPIAPVYGMLIDS 860

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVT---CSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
             K GRL+TA +L   +       ++ +    +++I  LC   Q+++A  L  +M  +  
Sbjct: 861 FSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGI 920

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           VP    F  L++G ++ NK ++ + L + +  E
Sbjct: 921 VPDLSAFVCLVKGLIERNKWNEALQLCYGICQE 953



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 240/506 (47%), Gaps = 25/506 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA+ F   M      P + ++  LLT   K KQ      +   + + G  P   + N L
Sbjct: 288 NEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSL 347

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME------AARLFKK 176
           ++  C     + A+ +  R+      P  V +N  I  +C    +        A +++++
Sbjct: 348 VHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEE 407

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           + V +C  N +        LC       A ++ +EM+ + G +  PD  TY  +I  LC+
Sbjct: 408 MLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRK-GFV--PDASTYTKVITFLCQ 464

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              VDKA  L  +MK   +NP+V TY  LI  FC     ++A+  F EM   G  P+VVT
Sbjct: 465 AKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVT 524

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           + A+++   K  ++ + N +   M+     P+ +TY++L+DG C  G I +A E++  ++
Sbjct: 525 YTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLI 584

Query: 357 --SKGCRHDVY--------------SYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             S     D Y              +Y  L+N  CK QKV DA  L   ML+    P+ I
Sbjct: 585 GTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQI 644

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y+ L+ G  +VG +  A ++  +M     +P   T+ + ID + K+G +  A++V   +
Sbjct: 645 VYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 704

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
               C   + TY  +++GLCK G  + A  L   ++ KG  P+VVT + +I  L K G++
Sbjct: 705 LKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKV 764

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLL 546
           D   +L + M+ K C P+ VT+  L+
Sbjct: 765 DAGLELFMQMKTKGCAPNYVTYRILI 790



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 236/483 (48%), Gaps = 24/483 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  M K+  +P + ++TIL+    K    +   S F  + S G  P++     L
Sbjct: 469 DKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTAL 528

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           ++   K      A  +  R++     PN +T++ LI+GLC  G I +A  ++ KL     
Sbjct: 529 LHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSD 588

Query: 178 -----------NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
                      +     PNVVT+  L+NGLC+ +    A  L + M+    A C+P+ + 
Sbjct: 589 NIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAML---AAGCEPNQIV 645

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y++++DG CK G +D A+E+ L+M      P+V TY SLI           A  +  +M+
Sbjct: 646 YDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 705

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +   P+VVT+ AM++  CK G+ +K   LL LM ++G +P+ VTY +L+DG    G++ 
Sbjct: 706 KDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVD 765

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
              ELF+ M +KGC  +  +Y ILIN  C    ++DA  L  EM        +  Y T +
Sbjct: 766 AGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTV 825

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            G  +      +L L+++M+ +D  P +  +   ID   K G +  A+++ + +      
Sbjct: 826 QGFSK--RFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSS 883

Query: 467 LRIET---YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           L + +   +  LI  LC   +++ A  L+  ++ +G +PD+     ++  L +  + ++A
Sbjct: 884 LNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEA 943

Query: 524 NDL 526
             L
Sbjct: 944 LQL 946



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 148/577 (25%), Positives = 260/577 (45%), Gaps = 58/577 (10%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG-------- 130
           P   ++  L+ +LA   Q +    + K ++++G   D   +      LCK G        
Sbjct: 202 PSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDL 261

Query: 131 ---------------ITSG---------AFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
                          + SG         A   L R+  + + PN VT+  L+ G   + +
Sbjct: 262 LEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQ 321

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           +    R+   +    C+P+   FN+L++  C   +   A KLF  M N  G  C P  V 
Sbjct: 322 LGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRM-NTCG--CPPGYVV 378

Query: 227 YNSIIDGLC------KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           YN  I  +C          +D A+++  +M   +   N I   +     C V  +++A  
Sbjct: 379 YNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQ 438

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +  EMM  G  PD  T+  +I + C+  ++DK   L + M + GVNPD  TY  L+D FC
Sbjct: 439 IVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFC 498

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G I +A+  F  M S GC  +V +Y  L++A  K +++  A  ++  M+ +   P+ I
Sbjct: 499 KAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAI 558

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKM----------------QLNDVVPDSFTFATYIDGL 444
           TY+ L+ GL + G +  A ++  K+                  + + P+  T+   ++GL
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGL 618

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           CK   V +A  +  A+    CE     Y+ L++G CK+G + +A ++F R+   G +P V
Sbjct: 619 CKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSV 678

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
            T +++I  + K+G++D A  +L  M   +C P+ VT+  ++ G  +  +  K + LL  
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSL 738

Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           M  +K    ++   + ++D L K  K    L  F  +
Sbjct: 739 M-EKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQM 774



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 174/368 (47%), Gaps = 11/368 (2%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           S NI S+   ++F+       SP + ++  L+  L K ++      L   + + G  P+ 
Sbjct: 587 SDNIESD---FYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQ 643

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            V + L++  CK+G    A  V  R+ +  + P+  T+  LI+ +  +GR+  A ++  +
Sbjct: 644 IVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 703

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +   +C+PNVVT+  +++GLC+T  T  AL L   M  +    C P+VVTY ++IDGL K
Sbjct: 704 MLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKG---CSPNVVTYTALIDGLGK 760

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G VD   EL +QMK +   PN +TY  LI   C      +A  L  EM        +  
Sbjct: 761 AGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQG 820

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +   +    K  +      LLE M      P    Y  L+D F   GR+  A EL   M+
Sbjct: 821 YRTTVQGFSK--RFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMM 878

Query: 357 SKGCRHDVYSYNI---LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
                 ++ S ++   LI A C   +VE+AV LY EM    I P +  +  L+ GL +  
Sbjct: 879 EVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERN 938

Query: 414 NLGDALKL 421
              +AL+L
Sbjct: 939 KWNEALQL 946



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 132/307 (42%), Gaps = 41/307 (13%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I S + V+    M K    P + ++T L+  + K+ + D  + +  ++  +   P+
Sbjct: 655 KVGEIDSAQEVFLR--MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPN 712

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     +++ LCK G T  A  +L  + +   +PN VT+  LI+GL   G++     LF 
Sbjct: 713 VVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFM 772

Query: 176 KLNVFACDPNVVTFNTLINGLCR---------------------------------TRNT 202
           ++    C PN VT+  LIN  C                                  ++  
Sbjct: 773 QMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRF 832

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT- 261
           L +L L EEM +   A   P    Y  +ID   K G ++ A EL  +M + + + N+ + 
Sbjct: 833 LASLGLLEEMESHDTAPIAP---VYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASK 889

Query: 262 --YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
             + SLI   C     +EA  L+ EM   G+ PD+  F  ++    +  K ++  +L   
Sbjct: 890 DMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYG 949

Query: 320 MIQRGVN 326
           + Q GVN
Sbjct: 950 ICQEGVN 956



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 3/142 (2%)

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G  G+AL+ + +++     P + T+   +  L   G V  A +V + +      +   T 
Sbjct: 183 GLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTV 242

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
                 LCK GR   A  L  R   K    D V C+ MI  L +    ++A   L  M  
Sbjct: 243 GSFAQALCKEGRWGDALDLLEREDFK---LDTVLCTQMISGLMEASLFNEAMSFLHRMRC 299

Query: 533 KNCVPSEVTFCTLLRGFVQNNK 554
            + +P+ VT+ TLL GF++  +
Sbjct: 300 NSYIPNVVTYRTLLTGFLKKKQ 321


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 214/417 (51%), Gaps = 7/417 (1%)

Query: 91  LAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPN 150
           + +   ++  + LF R N   L       N+LI   C       AF +L  +       N
Sbjct: 1   MVRAGSHNQALQLF-RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 151 TVTFNFLINGLCAEGRIMEAARLF-KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
             T + ++ GLC  GR+ +A   F   L +    P+VV++ TLINGLC+      A  LF
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            +MV   G  C+P+  TYN+++DGLCK   +D A+ ++ + + R+  P+V+TYN+L+   
Sbjct: 120 RKMVAAGG--CRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAAL 177

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
             +    EA   F +M + G  P +V+FNA+I   C+  ++     +   MI R  +P+ 
Sbjct: 178 FQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNL 237

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           VTY+ ++DG C   ++  A++L   MVS+GCR D+ +Y  L+       +++ A+ L R 
Sbjct: 238 VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR 297

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M+S+   P V+TY  ++  L +VG + DA ++  ++  N   P+  T++  I G C+   
Sbjct: 298 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR 357

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           V E  +V   +R   C   + TYN +I GL  + R + A  +F  +   G +PD  T
Sbjct: 358 VDEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDART 411



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 186/364 (51%), Gaps = 20/364 (5%)

Query: 64  EAVYFFDCMIKMK-PSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGLFPDLFVLNL 121
           +A+  FD  +++    P + S+T L+  L K  + D    LF+++  + G  P+ F  N 
Sbjct: 78  QALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNA 137

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L++ LCK      A  V+    +  F P+ VT+N L+  L   GR+ EA   F ++    
Sbjct: 138 LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 197

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGAICKPDVVTYNSIIDGLCKDGFV 240
             P +V+FN +I GLCR R    AL++F EM++ +F     P++VTY+ +IDGLCK   +
Sbjct: 198 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF----HPNLVTYSVVIDGLCKSDQL 253

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D+A++LL +M      P+++ Y  L+ GF        A  L   M+  G  PDVVT+  +
Sbjct: 254 DEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVV 313

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           I+  CK G++D  + +   ++    +P+ VTY++L+ G+C   R SR  E    M    C
Sbjct: 314 IDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC---RASRVDEGGKVMREMAC 370

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
           R +V +YN +I       + E+A  ++REM      P   TY            L  AL+
Sbjct: 371 RPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR----------GLKRALR 420

Query: 421 LIDK 424
           +ID+
Sbjct: 421 MIDQ 424



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 195/371 (52%), Gaps = 6/371 (1%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL+LF E   +  A      VTYN +I G C    +D A  LL +M    +  N  T + 
Sbjct: 10  ALQLFRENPCQLPA----SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSI 65

Query: 265 LICGFCCVDDWKEAKCLFIEMMD-NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           ++ G C      +A   F   ++    QPDVV++  +IN  CK G++D    L   M+  
Sbjct: 66  ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 125

Query: 324 G-VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           G   P+  TYN+L+DG C   R+  AR +      +    DV +YN L+ A  +  +V++
Sbjct: 126 GGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDE 185

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A+  + +M  E   P+++++N +++GL +   L DAL++ ++M   D  P+  T++  ID
Sbjct: 186 ALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVID 245

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           GLCK+  + EA Q+   + +  C   +  Y  L+ G    GRL +A  L  R+  +G IP
Sbjct: 246 GLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIP 305

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           DVVT + +I  LCK G++D A+++  ++ A  C P+ VT+  L+ G+ + ++  +   ++
Sbjct: 306 DVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM 365

Query: 563 HKMAAEKLVVS 573
            +MA    VV+
Sbjct: 366 REMACRPNVVT 376



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 125/238 (52%), Gaps = 6/238 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+  F  M +    P + SF  ++T L + ++    + +F  +      P+L   +++
Sbjct: 184 DEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVV 243

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LCK      A  +L R++     P+ V +  L+ G  A GR+  A  L +++    C
Sbjct: 244 IDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGC 303

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VVT+  +I+ LC+      A ++F E+V      C P+VVTY+++I G C+   VD+
Sbjct: 304 IPDVVTYTVVIDKLCKVGRVDDAHEIFRELVAN---KCSPNVVTYSALIGGYCRASRVDE 360

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
             +++ +M  R   PNV+TYN++I G   VD  +EA  +F EM + G  PD  T+  +
Sbjct: 361 GGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 118/235 (50%), Gaps = 8/235 (3%)

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           ++ A   +Q ++    L+RE   + +  S +TYN L+ G     +L  A  L+ +M +  
Sbjct: 1   MVRAGSHNQALQ----LFRENPCQ-LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEG 55

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQA-IRNCKCELRIETYNCLINGLCKMGRLKTA 488
           +  +  T +  + GLC+ G V +A++ F A +     +  + +Y  LINGLCK+GR+  A
Sbjct: 56  MQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAA 115

Query: 489 CKLFHRLQHKGPI-PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
             LF ++   G   P+  T + ++  LCK+ ++D A  ++ +   ++  P  VT+ TL+ 
Sbjct: 116 FDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMA 175

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
              Q  +  + +    +M  E  V + +S ++ ++  L + ++  + L  F  ++
Sbjct: 176 ALFQLGRVDEALATFTQMTEEGYVPTLVSFNA-IITGLCRARRLADALEVFNEMI 229


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 234/492 (47%), Gaps = 32/492 (6%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           +L  L K +Q+     LF ++  +G+  D +V    I   C+     GA  ++ R+    
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
              + V +N L+ GLC   R+ EA  +   +       + VT+ TL+ G CR     +AL
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 288

Query: 207 KLFEEMV-------------------------NEFGAICK-------PDVVTYNSIIDGL 234
           ++  +M+                           F   CK       P+V  YN++ID L
Sbjct: 289 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKL 348

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK+   D A  L  +M  R + PN +TY  LI   C     ++A CLF +M D G++  V
Sbjct: 349 CKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTV 408

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
             +N++IN  CK G +D+   LL  M++ G+ P   +Y+ L+ G C  G +S   EL   
Sbjct: 409 YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHRE 468

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M  +G   + Y++  LIN  CKD+K+++A  L+ +M+   + P+ +T+N ++ G   VGN
Sbjct: 469 MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGN 528

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A +L D+M    + PD++T+ + I GLC    V +A +    + N    L   +   
Sbjct: 529 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L+ G  + GR      L+  +  +G   D+V+ + +++   K+   +K+  L  +M+ + 
Sbjct: 589 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQG 648

Query: 535 CVPSEVTFCTLL 546
             P ++ +  ++
Sbjct: 649 VKPDDIFYTCMI 660



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 240/503 (47%), Gaps = 37/503 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L+  L KN+++D    LFK +   GL P+     +LI+ LCK G+   A  +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++           +N LING C +G +  A  L   +      P   +++ LI GLCR
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +    ++L  EM     A    +  T+ ++I+G CKD  +D+A  L  +M D N+ PN
Sbjct: 456 NGDLSSCMELHREMAERGIAW---NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +T+N +I G+C V + ++A  L+ +M++ G++PD  T+ ++I+  C    + K N  + 
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            +       +  +  +L+ GF   GR +    L+  M  +G + D+ S+ I++ A  K  
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
             E +  L+REM  + ++P  I Y  ++  L +  N+  AL   D+M ++   P++ T  
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 692

Query: 439 TYIDGLCKNGFVLEA-----------VQVFQAIRNCKCEL-------------------- 467
             I+ LCK+G++  A           V   +   NC  +                     
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 752

Query: 468 ---RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I ++N LI GLCK G+++ A  L  ++   G  PD ++ ST+IH LCK G ++KA 
Sbjct: 753 HLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAF 812

Query: 525 DLLLDMEAKNCVPSEVTFCTLLR 547
           +L  +M  K   P  V +   +R
Sbjct: 813 ELWNEMLYKGLKPDVVAYNIFIR 835



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 237/500 (47%), Gaps = 3/500 (0%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N+   EAV   + M+ +  +    ++  L+    + ++ +  + +   +   G  P    
Sbjct: 246 NMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 305

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            + +I+ L K  +   AF +  ++      PN   +N LI+ LC   R  +A RLFK++ 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +PN VT+  LI+ LC+      AL LF++M ++     K  V  YNS+I+G CK G
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG---IKVTVYPYNSLINGYCKQG 422

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +D+A+ LL  M    + P   +Y+ LI G C   D      L  EM + G+  +  TF 
Sbjct: 423 SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFT 482

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+IN  CKD KMD+  RL + MI   V P+ VT+N +++G+CLVG I +A +L+  MV  
Sbjct: 483 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM 542

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G + D Y+Y  LI+  C    V  A     ++ +     +  +   LL G F+ G   + 
Sbjct: 543 GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTET 602

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L D+M +  V  D  +F   +    K     ++  +F+ ++    +     Y C+I+ 
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L K   +  A   + ++   G  P+ VT + +I+ LCK G +  A  L  +M A N +P+
Sbjct: 663 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 539 EVTFCTLLRGFVQNNKKSKV 558
           + T+   L  F       K 
Sbjct: 723 KFTYNCFLDYFATEGDMEKA 742



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/521 (28%), Positives = 232/521 (44%), Gaps = 39/521 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  M      P   ++ IL+  L K    +  + LF ++   G+   ++  N L
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSL 414

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTP--------------------------------- 149
           IN  CK G    A  +L  +++   TP                                 
Sbjct: 415 INGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGI 474

Query: 150 --NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
             N  TF  LING C + ++ EAARLF K+      PN VTFN +I G C   N   A +
Sbjct: 475 AWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQ 534

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L+++MV E G   KPD  TY S+I GLC    V KA E +  +++     N  +  +L+ 
Sbjct: 535 LYDQMV-EMG--LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GF     + E   L+ EM   GV+ D+V+F  ++    K    +K   L   M ++GV P
Sbjct: 592 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D + Y  ++D       + +A   +  MV  G   +  ++ +LIN  CK   +  A  L 
Sbjct: 652 DDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLC 711

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           +EML+  + P+  TYN  L      G++  A  L   M L   +    +F   I GLCK 
Sbjct: 712 KEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKA 770

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + EA+ +   I          +Y+ +I+ LCKMG +  A +L++ + +KG  PDVV  
Sbjct: 771 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
           +  I W    G+ DKA  +  +M      P+  T+  LL G
Sbjct: 831 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 230/493 (46%), Gaps = 38/493 (7%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VLG  L S  T N  T + ++  L    +   A  LF K+       +   +   I   C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            +RN   A  L   M +E     K   V YN ++ GLCK+  V +A E+   M +  +  
Sbjct: 210 ESRNLDGARGLVVRMESEG---VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTA 266

Query: 258 NVITYNSLICGFCCVDDWK-----------------EAKCLFI----------------- 283
           + +TY +L+ GFC +++ +                 EA C F+                 
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 326

Query: 284 -EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            ++ D G+ P+V  +NA+I+  CK+ + D  +RL + M  RG+ P+ VTY  L+   C  
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G I  A  LF  M  KG +  VY YN LIN  CK   ++ A  L   M+ E + P+  +Y
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           + L++GL + G+L   ++L  +M    +  +++TF   I+G CK+  + EA ++F  + +
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                   T+N +I G C +G ++ A +L+ ++   G  PD  T  ++I  LC    + K
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           AN+ + D+E    V +  +   LL GF +  + ++   L  +MA   + +  +S +  V 
Sbjct: 567 ANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 626

Query: 583 DLLSKDKKYRECL 595
             L +  K + C+
Sbjct: 627 AALKQHDKEKSCV 639



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 180/428 (42%), Gaps = 44/428 (10%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +FT L+    K+K+ D    LF ++  + + P+    N++I   C +G    AF +  ++
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539

Query: 143 LRSCFTPNTVTFNFLINGLC-----------------------------------AEGRI 167
           +     P+  T+  LI+GLC                                    EGR 
Sbjct: 540 VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRF 599

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
            E   L+ ++ V     ++V+F  ++    +  +   +  LF EM  E G   KPD + Y
Sbjct: 600 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM-KEQG--VKPDDIFY 656

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
             +ID L K+  + +A     QM     +PN +T+  LI   C       A+ L  EM+ 
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
             V P+  T+N  ++Y   +G M+K   L   M+Q G     V++N L+ G C  G+I  
Sbjct: 717 GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQE 775

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A +L   +   G   D  SY+ +I+  CK   +  A  L+ EML + ++P V+ YN  + 
Sbjct: 776 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
                G    AL +   M  + V P+  T+   + G+      L     F   R  K  +
Sbjct: 836 WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS-----LMLHYDFSCFRGTKQYI 890

Query: 468 RIETYNCL 475
           +I  Y  +
Sbjct: 891 QISVYELM 898



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 166/349 (47%), Gaps = 1/349 (0%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I  N  T + ++     +  +  A+ LF +M+ +GV  D   + A I   C+   +D  
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L+  M   GV    V YN LM G C   R+  A E+   MV+ G   D  +Y  L+  
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C+ +++E A+ +  +M+     PS    + ++  L +   + +A  L  K+    +VP+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            F +   ID LCKN    +A ++F+ +     E    TY  LI+ LCK G ++ A  LF 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           +++ KG    V   +++I+  CK+G +D+A  LL  M  +   P+  ++  L+ G  +N 
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             S  + L  +MA   +  ++ + ++ +++   KDKK  E    F  ++
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTA-LINGFCKDKKMDEAARLFDKMI 505



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 6/297 (2%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           S+   L    + G  T  E  + +D M        + SFTI++    K    +    LF+
Sbjct: 585 SLTALLYGFFREGRFT--ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 642

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            +   G+ PD      +I+ L K      A     +++   ++PNTVT   LIN LC  G
Sbjct: 643 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSG 702

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
            +  A  L K++      PN  T+N  ++      +   A  L   M+    A     +V
Sbjct: 703 YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA----SIV 758

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           ++N +I GLCK G + +A +L+ ++ +   +P+ I+Y+++I   C + D  +A  L+ EM
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 818

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
           +  G++PDVV +N  I +    G+ DK   +   MI+ GV P+  TY +L+ G  L+
Sbjct: 819 LYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/376 (33%), Positives = 201/376 (53%), Gaps = 6/376 (1%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           +L+  +  +G  P ++  N+L++  CK G    A +V   I +    P  V+FN LI+G 
Sbjct: 234 ALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGC 293

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C  G + E  RL   +      P+V TF+ LINGLC+         LF+EM    G    
Sbjct: 294 CKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMC---GRGLV 350

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+ VT+ ++IDG CK G VD A +    M  + + P+++TYN+LI G C V D KEA+ L
Sbjct: 351 PNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRL 410

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             EM  +G++PD +TF  +I+  CKDG M+    +   M++ G+  D V + +L+ G C 
Sbjct: 411 VNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCR 470

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            GR+  A  +   M+S G + D  +Y ++I+  CK   V+    L +EM S+   P V+T
Sbjct: 471 EGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVT 530

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN L++GL + G + +A  L+D M    V P+  T+   +DG  K+G  ++ V +F + +
Sbjct: 531 YNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD-VDIFNSEK 589

Query: 462 NCKCELRIETYNCLIN 477
               +    +Y  L+N
Sbjct: 590 GLVTD--YASYTALVN 603



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 202/369 (54%), Gaps = 4/369 (1%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P +  +N ++ G CK G V  A+ +  ++  R + P V+++N+LI G C   D +E   L
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              M   GV PDV TF+A+IN  CK+G++D+ + L + M  RG+ P+ VT+ +L+DG C 
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G++  A + F  M+++G R D+ +YN LIN  CK   +++A  L  EM +  ++P  IT
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           + TL+ G  + G++  AL++  +M    +  D   F   I GLC+ G V +A ++   + 
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +   +    TY  +I+  CK G +K   KL   +Q  G +P VVT + +++ LCK+GQM 
Sbjct: 486 SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMK 545

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A  LL  M      P+++T+  LL G  ++     V +      +EK +V+D +  + +
Sbjct: 546 NAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIF----NSEKGLVTDYASYTAL 601

Query: 582 VDLLSKDKK 590
           V+  SK  K
Sbjct: 602 VNESSKTSK 610



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 188/337 (55%)

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           ++++  L L++ D    P +  +N L+ GFC   D   A+ +F E+   G++P VV+FN 
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+  CK G +++  RL  +M   GV PD  T+++L++G C  GR+     LF  M  +G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              +  ++  LI+  CK  KV+ A+  ++ ML++ +RP ++TYN L++GL +VG+L +A 
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +L+++M  + + PD  TF T IDG CK+G +  A+++ + +     EL    +  LI+GL
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C+ GR+  A ++   +   G  PD  T + +I   CK+G +     LL +M++   VP  
Sbjct: 469 CREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGV 528

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           VT+  L+ G  +  +     +LL  M    +  +D++
Sbjct: 529 VTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDIT 565



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 179/336 (53%), Gaps = 3/336 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P +  F +L+    K         +F  +   GL P +   N LI+  CK G     F +
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
            G +      P+  TF+ LINGLC EGR+ E + LF ++      PN VTF TLI+G C+
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                +ALK F+ M+ +     +PD+VTYN++I+GLCK G + +A+ L+ +M    + P+
Sbjct: 366 GGKVDLALKNFQMMLAQG---VRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPD 422

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            IT+ +LI G C   D + A  +   M++ G++ D V F A+I+  C++G++    R+L 
Sbjct: 423 KITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLT 482

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+  G  PD  TY  ++D FC  G +    +L   M S G    V +YN L+N  CK  
Sbjct: 483 DMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQG 542

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           ++++A  L   ML+  + P+ ITYN LL G  + G+
Sbjct: 543 QMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGS 578



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 169/321 (52%), Gaps = 5/321 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G++ +   V  FD + K    P + SF  L++   K+   +    L   + S G+ PD
Sbjct: 260 KAGDVGNARLV--FDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPD 317

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F  + LIN LCK G      ++   +      PN VTF  LI+G C  G++  A + F+
Sbjct: 318 VFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQ 377

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      P++VT+N LINGLC+  +   A +L  EM     +  KPD +T+ ++IDG C
Sbjct: 378 MMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT---ASGLKPDKITFTTLIDGCC 434

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           KDG ++ A E+  +M +  I  + + + +LI G C      +A  +  +M+  G +PD  
Sbjct: 435 KDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDP 494

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+  CK G +    +LL+ M   G  P  VTYN+LM+G C  G++  A+ L  +M
Sbjct: 495 TYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAM 554

Query: 356 VSKGCRHDVYSYNILINANCK 376
           ++ G   +  +YNIL++ + K
Sbjct: 555 LNVGVAPNDITYNILLDGHSK 575



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 131/241 (54%)

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
            I R+  L++ ++  G    +Y +N+L++  CK   V +A  ++ E+    +RP+V+++N
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           TL+SG  + G++ +  +L   M+   V PD FTF+  I+GLCK G + E   +F  +   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                  T+  LI+G CK G++  A K F  +  +G  PD+VT + +I+ LCK G + +A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             L+ +M A    P ++TF TL+ G  ++      + +  +M  E + + D++ ++ +  
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 584 L 584
           L
Sbjct: 468 L 468



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 1/224 (0%)

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           ++E +  LY E+L     P +  +N L+ G  + G++G+A  + D++    + P   +F 
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
           T I G CK+G V E  ++   + +      + T++ LINGLCK GRL     LF  +  +
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +P+ VT +T+I   CK G++D A      M A+   P  VT+  L+ G  +     + 
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             L+++M A  L    ++ ++ ++D   KD      L   R ++
Sbjct: 408 RRLVNEMTASGLKPDKITFTT-LIDGCCKDGDMESALEIKRRMV 450


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 220/413 (53%), Gaps = 6/413 (1%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
             +  NLL   LCK G+   A  +   +     +PN+    FL++    +G++  A  L 
Sbjct: 102 SFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALL 161

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
             L  +  +   +  N+L+N L +      A+KLFEE +  F + C  D  T+N +I GL
Sbjct: 162 --LQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHL-RFQS-CN-DTKTFNILIRGL 216

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM-MDNGVQPD 293
           C  G  +KA ELL  M      P+++TYN+LI GFC  ++ K+A  +F ++   +G  PD
Sbjct: 217 CGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPD 276

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VVT+ +MI+  CK GKM + + LL+ M++ G+ P  VT+N L+DG+   G +  A E+  
Sbjct: 277 VVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRG 336

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+S GC  DV ++  LI+  C+  +V     L+ EM +  + P+  TY+ L++ L +  
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKEN 396

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L  A +L+ ++   D++P  F +   IDG CK G V EA+ + + +   KC+    T+ 
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFT 456

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
            LI G C  GR+  A  +FH++   G  PD +T S+++  L K G   +A  L
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 201/394 (51%), Gaps = 4/394 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A   F+CM     SP       L++  A+  +     +L   L S  +     V+N L+N
Sbjct: 122 AGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALL--LQSYEVEGCCMVVNSLLN 179

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            L K+     A  +    LR     +T TFN LI GLC  G+  +A  L   ++ F C P
Sbjct: 180 TLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLP 239

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           ++VT+NTLI G C++     A ++F+++ +  G  C PDVVTY S+I G CK G + +A 
Sbjct: 240 DIVTYNTLIKGFCKSNELKKANEMFDDVKSSSG--CSPDVVTYTSMISGYCKAGKMQEAS 297

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            LL  M    I P  +T+N L+ G+    +   A+ +  +M+  G  PDVVTF ++I+  
Sbjct: 298 VLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGY 357

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C+ G++++  RL E M  RG+ P+  TY+ L++  C   R+ +AREL   + SK      
Sbjct: 358 CRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQP 417

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           + YN +I+  CK  KV +A+ +  EM  ++ +P  IT+  L+ G    G + +A+ +  K
Sbjct: 418 FMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           M      PD  T ++ +  L K G   EA  + Q
Sbjct: 478 MVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 141/446 (31%), Positives = 217/446 (48%), Gaps = 30/446 (6%)

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           R  E +R   KLN+     +  T+N L   LC+     +A ++FE M        K D +
Sbjct: 88  RFWEFSRF--KLNI---RHSFWTYNLLTRSLCKAGMHDLAGQMFECM--------KSDGI 134

Query: 226 TYNSIIDGLCKDGFVDKAK-----ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           + NS + G     F +K K      LLLQ  +  +    +  NSL+     +D  ++A  
Sbjct: 135 SPNSRLLGFLVSSFAEKGKLHCATALLLQSYE--VEGCCMVVNSLLNTLVKLDRVEDAMK 192

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF E +      D  TFN +I   C  GK +K   LL  M   G  PD VTYN+L+ GFC
Sbjct: 193 LFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFC 252

Query: 341 LVGRISRARELFVSM-VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
               + +A E+F  +  S GC  DV +Y  +I+  CK  K+++A  L  +ML   I P+ 
Sbjct: 253 KSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTN 312

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +T+N L+ G  + G +  A ++  KM      PD  TF + IDG C+ G V +  ++++ 
Sbjct: 313 VTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEE 372

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +          TY+ LIN LCK  RL  A +L  +L  K  IP     + +I   CK G+
Sbjct: 373 MNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA-----EKLVVSD 574
           +++A  ++ +ME K C P ++TF  L+ G     +  + V + HKM A     +K+ VS 
Sbjct: 433 VNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492

Query: 575 LSLSSKVVDLLSKDKKYRECLNQFRH 600
           L LS  +   ++K+  +   LNQ  H
Sbjct: 493 L-LSCLLKAGMAKEAYH---LNQIAH 514



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 161/325 (49%), Gaps = 4/325 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+  F+  ++ +      +F IL+  L    + +  V L   ++  G  PD+   N L
Sbjct: 188 EDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTL 247

Query: 123 INCLCKMGITSGAFVVLGRILRSCF-TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           I   CK      A  +   +  S   +P+ VT+  +I+G C  G++ EA+ L   +    
Sbjct: 248 IKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLG 307

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P  VTFN L++G  +      A ++  +M++ FG  C PDVVT+ S+IDG C+ G V+
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMIS-FG--CFPDVVTFTSLIDGYCRVGQVN 364

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +   L  +M  R + PN  TY+ LI   C  +   +A+ L  ++    + P    +N +I
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVI 424

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  CK GK+++   ++E M ++   PD +T+  L+ G C+ GR+  A  +F  MV+ GC 
Sbjct: 425 DGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484

Query: 362 HDVYSYNILINANCKDQKVEDAVCL 386
            D  + + L++   K    ++A  L
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHL 509



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 33/298 (11%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGLFPDLFVLN 120
           + +AV     M      P + ++  L+    K+ +      +F  + +S+G  PD+    
Sbjct: 222 AEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYT 281

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
            +I+  CK G    A V+L  +LR    P  VTFN L++G    G +  A  +  K+  F
Sbjct: 282 SMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISF 341

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEM------VNEF------GAICK------- 221
            C P+VVTF +LI+G CR        +L+EEM       N F       A+CK       
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKA 401

Query: 222 -------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
                        P    YN +IDG CK G V++A  ++ +M+ +   P+ IT+  LI G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIG 461

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            C      EA  +F +M+  G  PD +T +++++   K G   +   L ++  +  +N
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAHKGQIN 519



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K+G +  NEA+   + M K K  P   +FTIL+       +    VS+F ++ + G  PD
Sbjct: 429 KAGKV--NEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486

Query: 116 LFVLNLLINCLCKMGITSGAF 136
              ++ L++CL K G+   A+
Sbjct: 487 KITVSSLLSCLLKAGMAKEAY 507


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 260/527 (49%), Gaps = 32/527 (6%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+  FD M K    P + S   LL+ L +N +    + +++++ + G+ PD+F   +++N
Sbjct: 205 ALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVN 264

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G    AF  +  + RSC  PN VT+N LI+G  + G +  A ++   ++      
Sbjct: 265 AYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPE 324

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------FG----AIC------------ 220
           N  T+  LI G C+      A KL   M+ +        +G    A C            
Sbjct: 325 NSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIR 384

Query: 221 --------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
                   K + V  NS+I+G CK G V+KA E+L+ MKD N+ P+   YN+L+ GFC  
Sbjct: 385 DAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQ 444

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
           +D+ +A  L  EM + GV   VVT+N ++      G ++    +  LM +RGV P+ VTY
Sbjct: 445 EDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTY 504

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
            +L+D F  VG   RA  ++   +SKG    +  YN +I   CK +K+  A  ++ +M  
Sbjct: 505 CTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
               P  ITY TL+ G  +VGNL +ALKL D  + + +   +  + + I G+ ++  + +
Sbjct: 565 LGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQK 624

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
              +   ++N +    + TY  LI G C  G +  A   + ++  KG  P+++  S ++ 
Sbjct: 625 LNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVS 684

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
            L + G++D+AN +L  +   + + +      L +  +++ +  K+V
Sbjct: 685 SLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIV 731



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 153/588 (26%), Positives = 256/588 (43%), Gaps = 108/588 (18%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++T+L+    K  Q +    L   +    LF D  V  +LI+  C  G    A  +   +
Sbjct: 328 TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAM 387

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L+     NTV  N LING C  G + +AA +   +  +   P+   +NTL++G C+  + 
Sbjct: 388 LKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDF 447

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           + A KL +EM N+        VVTYN+++  L   G V+ A  +   M  R + PN +TY
Sbjct: 448 IKAFKLCDEMHNKG---VNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTY 504

Query: 263 -----------------------------------NSLICGFCCVDDWKEAKCLFIEMMD 287
                                              N++ICGFC ++   +A+ +F++M +
Sbjct: 505 CTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564

Query: 288 NGVQPDVVTFNAMINYNCKDG-----------------------------------KMDK 312
            G  PD +T+  +I+  CK G                                   ++ K
Sbjct: 565 LGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQK 624

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
           +N LL  M  R ++P+ VTY SL+ G+C  G + +A   +  M+ KG   ++   + +++
Sbjct: 625 LNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVS 684

Query: 373 ANCKDQKVEDAVCLY-----------------------REMLSERIRPSV---------- 399
           +  +  K+++A  +                        R + +++I  S           
Sbjct: 685 SLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPIS 744

Query: 400 --ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
             I YN  ++GL +  N+ D  +++  + L    PD++T+ + I      G V EA  + 
Sbjct: 745 NNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLR 804

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
             + N      I  YN LINGLCK G L  A +LF++L  KG  P VVT +T+I   CK 
Sbjct: 805 DDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKG 864

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           G+  +A +L   M  +   PS +T+ TL+ G     K  + V LL++M
Sbjct: 865 GRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 248/548 (45%), Gaps = 74/548 (13%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           T F ++L + A+       + +F  +   G  P L   N L++ L + G    A +V  +
Sbjct: 187 TVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQ 246

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           ++     P+  ++  ++N  C EGR+ EA    K++    C+PNVVT+N+LI+G      
Sbjct: 247 MIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYV---- 302

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
                          G +C                      AK++L  M ++ I  N  T
Sbjct: 303 -------------SLGDVC---------------------GAKKVLALMSEKGIPENSRT 328

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y  LI G+C     ++A+ L   MM+  +  D   +  +I+  C  G++D   R+ + M+
Sbjct: 329 YTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAML 388

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           + G+  +TV  NSL++G+C +G +++A E+ VSM     + D Y YN L++  CK +   
Sbjct: 389 KVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFI 448

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A  L  EM ++ +  +V+TYNTLL  LF VG++  AL + + M    V P+  T+ T +
Sbjct: 449 KAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLL 508

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           D   K G    A+ +++   +      I  YN +I G CKM +L  A ++F +++  G  
Sbjct: 509 DAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFP 568

Query: 502 PDVVTCSTMIHWLCKEG-----------------------------------QMDKANDL 526
           PD +T  T+I   CK G                                   ++ K N L
Sbjct: 569 PDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGL 628

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           L +M+ +   P+ VT+ +L+ G+       K      KM  +K +  ++ + SK+V  L 
Sbjct: 629 LAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKM-IDKGIAPNIIIGSKIVSSLY 687

Query: 587 KDKKYREC 594
           +  K  E 
Sbjct: 688 RHGKIDEA 695



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 226/477 (47%), Gaps = 41/477 (8%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++  LL  L      +  + ++  ++  G+ P+      L++   K+G    A ++  
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
             L   FT +   +N +I G C   ++++A  +F K+      P+ +T+ TLI+G C+  
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG 585

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           N + ALKL ++M    G     ++  YNS+I G+ +   + K   LL +MK+R ++PNV+
Sbjct: 586 NLVEALKL-KDMSERDGISSSTEM--YNSLITGVFRSEELQKLNGLLAEMKNRELSPNVV 642

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE-- 318
           TY SLI G+C      +A   + +M+D G+ P+++  + +++   + GK+D+ N +L   
Sbjct: 643 TYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQI 702

Query: 319 ----------------------LMIQRGVNP-----------DTVTYNSLMDGFCLVGRI 345
                                 L  Q+ V+            + + YN  + G C    I
Sbjct: 703 ADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNI 762

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
              R +   ++ KG   D Y+Y  LI+A     KV +A CL  +M++  + P+++ YN L
Sbjct: 763 DDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNAL 822

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           ++GL + GNL  A +L +K+    + P   T+ T IDG CK G   EA+++   +R    
Sbjct: 823 INGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGI 882

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG---PIPDVVTCSTMIHWLCKEGQ 519
                TY+ LI+GL   G+ + +  L + +   G    + D +     + W  K+ +
Sbjct: 883 CPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGSSVMDPLVARAYVKWRDKQSE 939



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 197/386 (51%), Gaps = 5/386 (1%)

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
           F+  P V  F+ ++        T  AL +F+ M  + G +  P + + NS++  L ++G 
Sbjct: 182 FSFSPTV--FDMILKVFAEKGMTKFALCVFDNM-GKCGRV--PSLRSCNSLLSNLVQNGE 236

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
             KA  +  QM    I P++ +Y  ++  +C      EA     EM  +  +P+VVT+N+
Sbjct: 237 AFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNS 296

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           +I+     G +    ++L LM ++G+  ++ TY  L+ G+C  G++ +A +L   M+ K 
Sbjct: 297 LIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKN 356

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              D + Y +LI+A C   +V+DA+ +   ML   ++ + +  N+L++G  ++G++  A 
Sbjct: 357 LFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAA 416

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +++  M+  ++ PDS+ + T +DG CK    ++A ++   + N      + TYN L+  L
Sbjct: 417 EVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNL 476

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
             +G ++ A  +++ +  +G  P+ VT  T++    K G  D+A  +  D  +K    S 
Sbjct: 477 FHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSI 536

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKM 565
             + T++ GF +  K  +   +  KM
Sbjct: 537 TLYNTMICGFCKMEKLVQAQEIFLKM 562



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 175/374 (46%), Gaps = 48/374 (12%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K GN+   EA+   D   +   S     +  L+T + ++++   +  L   + +  L P+
Sbjct: 583 KVGNLV--EALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPN 640

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +     LI   C  G+   A+    +++     PN +  + +++ L   G+I EA  +  
Sbjct: 641 VVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILH 700

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG----AICKPDVVTYNSII 231
           +  +   DP     +++       ++ L  L+  +++V+ FG    +I   + + YN  I
Sbjct: 701 Q--IADIDPIAAHAHSVE----LPKSDLRHLET-QKIVDSFGKKAMSIPISNNIVYNIAI 753

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
            GLCK   +D  + +L  +  +   P+  TY SLI     V    EA CL  +M++ G+ 
Sbjct: 754 TGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLV 813

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           P++V +NA+IN  CK G +D+  RL   + ++G++P  VTYN+L+DG+C  GR + A EL
Sbjct: 814 PNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALEL 873

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
                                   KD+  E+ +C           PS ITY+TL+ GL+ 
Sbjct: 874 ------------------------KDKMREEGIC-----------PSSITYSTLIHGLYM 898

Query: 412 VGNLGDALKLIDKM 425
            G    ++ L+++M
Sbjct: 899 EGKSEQSVGLLNEM 912


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 248/504 (49%), Gaps = 14/504 (2%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
           Y+ D   +    P    +  +L +L+K K       + + +   G+         ++   
Sbjct: 188 YWADRQWRYSHHP--VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSY 245

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
            + G    A  VL  + ++   P+    N  I  L   G++ +A +  +++ V    P++
Sbjct: 246 SRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDI 305

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           VT+N+LI G C       AL+L   + ++    C PD V+Y +++  LCK+  +++ K L
Sbjct: 306 VTYNSLIKGYCDLNRIEDALELIAGLPSKG---CPPDKVSYYTVMGFLCKEKKIEEVKCL 362

Query: 247 LLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           + +M  + N+ P+ +TYN+LI          +A     E  D G   D V ++A+++  C
Sbjct: 363 MEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFC 422

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           + G+MD+   L+  M  RG NPD VTY +++DGFC +GRI  A+++   M   GC+ +  
Sbjct: 423 QKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTV 482

Query: 366 SYNILINANCKDQKVEDAVCLYREML--SER--IRPSVITYNTLLSGLFQVGNLGDALKL 421
           SY  L+N  C   K  +A    REM+  SE     P+ ITY  ++ GL + G L +A  L
Sbjct: 483 SYTALLNGLCHSGKSLEA----REMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDL 538

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
             +M      P        I  LC+N  V+EA +  +   N  C + +  +  +I+G C+
Sbjct: 539 TREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQ 598

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
           +G ++ A  +   +   G  PD VT + +   L K+G++D+A +L++ M +K   P+ VT
Sbjct: 599 IGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVT 658

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
           + +++  + Q  +   ++ LL KM
Sbjct: 659 YRSVIHRYSQWGRVDDMLNLLEKM 682



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 260/537 (48%), Gaps = 15/537 (2%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+     M K    P ++     + +L K  + +  +   +R+   G+ PD+   N LI 
Sbjct: 254 ALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIK 313

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD- 183
             C +     A  ++  +      P+ V++  ++  LC E +I E   L +K+ V+  + 
Sbjct: 314 GYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKM-VWNSNL 372

Query: 184 -PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+ VT+NTLI+ L +  +   AL   +E  ++   I   D V Y++I+   C+ G +D+
Sbjct: 373 IPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHI---DKVGYSAIVHSFCQKGRMDE 429

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK L++ M  R  NP+V+TY +++ GFC +    EAK +  +M  +G +P+ V++ A++N
Sbjct: 430 AKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLN 489

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C  GK  +   ++ +  +    P+ +TY ++M G    G++S A +L   MV KG   
Sbjct: 490 GLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFP 549

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
                N+LI + C++QKV +A     E L++    +V+ + T++ G  Q+G++  AL ++
Sbjct: 550 TPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVL 609

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D M L+   PD+ T+    D L K G + EA ++   + +   +    TY  +I+   + 
Sbjct: 610 DDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQW 669

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           GR+     L  ++  + P   V   + +I  LC  G +++A  LL  +  +     +   
Sbjct: 670 GRVDDMLNLLEKMLKRQPFRTVY--NQVIEKLCDFGNLEEAEKLLGKV-LRTASKVDANT 726

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKL---VVSDLSLSSKVVDLLSKDKKYRECLN 596
           C +L   +++  K  V +  +K+A       +  DL L  KV   L  D K  E  N
Sbjct: 727 CHVL---MESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADN 780



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 224/502 (44%), Gaps = 41/502 (8%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG----------- 111
            +A+ F + M      P + ++  L+       + +  + L   L S G           
Sbjct: 287 EKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTV 346

Query: 112 -------------------------LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
                                    L PD    N LI+ L K G    A   L       
Sbjct: 347 MGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKG 406

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F  + V ++ +++  C +GR+ EA  L   +    C+P+VVT+  +++G CR      A 
Sbjct: 407 FHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAK 466

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           K+ ++M   +   CKP+ V+Y ++++GLC  G   +A+E++   ++    PN ITY +++
Sbjct: 467 KILQQM---YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVM 523

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G        EA  L  EM++ G  P  V  N +I   C++ K+ +  + LE  + +G  
Sbjct: 524 HGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCA 583

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            + V + +++ GFC +G +  A  +   M   G   D  +Y  L +A  K  ++++A  L
Sbjct: 584 INVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAEL 643

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
             +MLS+ + P+ +TY +++    Q G + D L L++KM      P    +   I+ LC 
Sbjct: 644 IVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQ--PFRTVYNQVIEKLCD 701

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G + EA ++   +     ++   T + L+    K G   +A K+  R+  +   PD+  
Sbjct: 702 FGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKL 761

Query: 507 CSTMIHWLCKEGQMDKANDLLL 528
           C  +   L  +G++ +A++L+L
Sbjct: 762 CEKVSKKLVLDGKLVEADNLML 783



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 108/261 (41%), Gaps = 36/261 (13%)

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           V Y +++D          AR +   M  +G      ++  ++ +  +  K+ +A+ +   
Sbjct: 201 VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTL 260

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    + PS+   NT +  L + G L  ALK +++MQ+  + PD                
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPD---------------- 304

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
                              I TYN LI G C + R++ A +L   L  KG  PD V+  T
Sbjct: 305 -------------------IVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYT 345

Query: 510 MIHWLCKEGQMDKANDLLLDM-EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           ++ +LCKE ++++   L+  M    N +P +VT+ TL+    ++      +  L +   +
Sbjct: 346 VMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDK 405

Query: 569 KLVVSDLSLSSKVVDLLSKDK 589
              +  +  S+ V     K +
Sbjct: 406 GFHIDKVGYSAIVHSFCQKGR 426


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 148/555 (26%), Positives = 269/555 (48%), Gaps = 70/555 (12%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV     M +    P + S+  LL+   K  ++   + L   +   G+  D+   N+ I
Sbjct: 193 KAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFI 252

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC+   ++  ++VL ++     TPN V++N LING   EG+I  A R+F ++      
Sbjct: 253 DSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLS 312

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEM---------------VNEFGAICKPDV---- 224
           PN++T+N LING C   N   AL++ + M               +N      K DV    
Sbjct: 313 PNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNI 372

Query: 225 -------------VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
                        +++  +IDGLC++G +D+A +LL++M    ++P++IT++ LI GFC 
Sbjct: 373 LERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCK 432

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN--------------------------- 304
           V +  +AK +  ++   G  P+ V F+ +I YN                           
Sbjct: 433 VGNINKAKEVMSKIYREGFVPNNVIFSTLI-YNSCKVGNVYEAMKFYAAMNLNGQNADNF 491

Query: 305 ---------CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
                    C++GK+ +    L  + + G+ P++VT++ +++G+  VG  S A  +F  M
Sbjct: 492 TCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRM 551

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +S G     ++Y  L+   CK Q   +A  L +++    +    I+YNTL+  + + GNL
Sbjct: 552 ISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNL 611

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG-FVLEAVQVFQAIRNCKCELRIETYNC 474
            +A++L ++M  N+++PDS+T+   + GL + G  V   + + + ++     L    Y C
Sbjct: 612 LEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTC 671

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
            I+GL K G+ K A  LF  ++ KG   D++  +++     + G++  A+ L+     KN
Sbjct: 672 FIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKN 731

Query: 535 CVPSEVTFCTLLRGF 549
            +P+  TF  LL G+
Sbjct: 732 VIPNLTTFNILLHGY 746



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/573 (24%), Positives = 272/573 (47%), Gaps = 38/573 (6%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            AV  F  M+     P + +  +++  + KN +   V S FK++ ++ + P++   N+LI
Sbjct: 123 HAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILI 182

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LC  G    A  +L  + R+ + P  V++N L++  C +GR   A  L   +      
Sbjct: 183 SVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQ 242

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            +V T+N  I+ LCR   +     + ++M N+   +  P+ V+YN++I+G  K+G +  A
Sbjct: 243 ADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK---MITPNEVSYNTLINGFVKEGKIGVA 299

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +  +M + N++PN+ITYN LI G+C   +++EA  +   M  N V+P+ VT   ++N 
Sbjct: 300 TRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNG 359

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K  K D    +LE       + + +++  ++DG C  G +  A +L + M   G   D
Sbjct: 360 LYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPD 419

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + ++++LIN  CK   +  A  +  ++  E   P+ + ++TL+    +VGN+ +A+K   
Sbjct: 420 IITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYA 479

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M LN    D+FT  + +  LC+NG ++EA +    I          T++C+ING   +G
Sbjct: 480 AMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVG 539

Query: 484 RLKTACKLFHRL----QHKGP----------------------------IP---DVVTCS 508
               A  +F R+     H  P                            IP   D ++ +
Sbjct: 540 DGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYN 599

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
           T+I  + K G + +A  L  +M   N +P   T+  +L G ++  +     + L ++  +
Sbjct: 600 TLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQK 659

Query: 569 KLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +++  +  + +  +D L K  + +  L  F+ +
Sbjct: 660 EILTLNSIVYTCFIDGLFKAGQSKAALYLFKEM 692



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 264/592 (44%), Gaps = 58/592 (9%)

Query: 65  AVYFFDCMIK---MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-----NSNGLFPDL 116
           A+ F   +IK   ++P+       I   +L K + Y    S+ K L      SN LF  L
Sbjct: 35  ALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGVL 94

Query: 117 F-----------VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
                       V +LLI    + G+   A      +L   F P+  T N ++  +    
Sbjct: 95  MDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNC 154

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLC------------------------RTRN 201
           R       FK++      PNV +FN LI+ LC                         + N
Sbjct: 155 RAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYN 214

Query: 202 TLV-----------ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           TL+           AL L   M  E   I + DV TYN  ID LC++    +   +L +M
Sbjct: 215 TLLSWCCKKGRFKFALVLIHHM--ECKGI-QADVCTYNMFIDSLCRNSRSAQGYLVLKKM 271

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
           +++ I PN ++YN+LI GF        A  +F EM++  + P+++T+N +IN  C +G  
Sbjct: 272 RNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNF 331

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
           ++  R+L++M    V P+ VT  +L++G     +   AR +           +  S+ ++
Sbjct: 332 EEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVM 391

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+  C++  +++A  L  EM  + + P +IT++ L++G  +VGN+  A +++ K+     
Sbjct: 392 IDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGF 451

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           VP++  F+T I   CK G V EA++ + A+          T N L+  LC+ G+L  A +
Sbjct: 452 VPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEE 511

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
             H +   G +P+ VT   +I+     G    A  +   M +    PS  T+ +LL+   
Sbjct: 512 FLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLC 571

Query: 551 QNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +     +   LL K+    L V  +S ++ +V+ +SK     E +  F  ++
Sbjct: 572 KGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE-ISKSGNLLEAVRLFEEMI 622



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 142/624 (22%), Positives = 260/624 (41%), Gaps = 81/624 (12%)

Query: 46  SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           +I   LN  +KS        +    C+   + S    S T+++  L +N   D    L  
Sbjct: 352 TIGTLLNGLYKSAKFDVARNILERYCI--NRTSLNCISHTVMIDGLCRNGLLDEAFQLLI 409

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            +  +G+ PD+   ++LIN  CK+G  + A  V+ +I R  F PN V F+ LI   C  G
Sbjct: 410 EMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVG 469

Query: 166 RIMEAARLFKKLNV-------FACD----------------------------PNVVTFN 190
            + EA + +  +N+       F C+                            PN VTF+
Sbjct: 470 NVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFD 529

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAIC--KPDVVTYNSIIDGLCKDGFVDKAKELLL 248
            +ING     +   A  +F+ M++     C   P   TY S++  LCK     +A++LL 
Sbjct: 530 CIINGYANVGDGSGAFSVFDRMIS-----CGHHPSPFTYGSLLKVLCKGQNFWEARKLLK 584

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           ++    +  + I+YN+LI       +  EA  LF EM+ N + PD  T+  +++   ++G
Sbjct: 585 KLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREG 644

Query: 309 KMDKVNRLLELMIQRGV-NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           ++      L  ++Q+ +   +++ Y   +DG    G+   A  LF  M  KG   D+ + 
Sbjct: 645 RLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIAL 704

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N + +   +  KV  A  L  +  ++ + P++ T+N LL G  +  ++    KL + M+ 
Sbjct: 705 NSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRR 764

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
           +   P+  T+ + I GLC +G +   +++ +        +   T+N LI   C++  L  
Sbjct: 765 SGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDK 824

Query: 488 ACKLFHRLQ-----------------------------------HKGPIPDVVTCSTMIH 512
              L H ++                                    KG IP      TM+ 
Sbjct: 825 VIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMK 884

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
            +C+ G +  A  L   M A      +   C ++RG     K  + + +L +M   K + 
Sbjct: 885 RMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIP 944

Query: 573 SDLSLSSKVVDLLSKDKKYRECLN 596
           +  + ++ ++ +  K   ++E  N
Sbjct: 945 TTSTFTT-LMHVFCKKDNFKEAHN 967



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 136/593 (22%), Positives = 247/593 (41%), Gaps = 70/593 (11%)

Query: 56   KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
            K GN+   EA+ F+  M     +    +   L+  L +N +          ++  GL P+
Sbjct: 467  KVGNVY--EAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPN 524

Query: 116  LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                + +IN    +G  SGAF V  R++     P+  T+  L+  LC      EA +L K
Sbjct: 525  SVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLK 584

Query: 176  KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-------------------- 215
            KL+      + +++NTLI  + ++ N L A++LFEEM+                      
Sbjct: 585  KLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREG 644

Query: 216  --------FGAICKPDVVTYNSI-----IDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
                     G + + +++T NSI     IDGL K G    A  L  +M+++ ++ ++I  
Sbjct: 645  RLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIAL 704

Query: 263  NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            NS+  G+  +     A  L  +  +  V P++ TFN +++   +   +    +L  LM +
Sbjct: 705  NSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRR 764

Query: 323  RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK------ 376
             G  P+ +TY+SL+ G C  G +    ++    +++    D  ++N+LI   C+      
Sbjct: 765  SGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDK 824

Query: 377  ---------------DQKVEDAV--------------CLYREMLSERIRPSVITYNTLLS 407
                           D+  + AV                  EML +   P+   Y T++ 
Sbjct: 825  VIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMK 884

Query: 408  GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
             + +VG++  A KL D+M    +  D       + GL   G + EA+ + Q +   K   
Sbjct: 885  RMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIP 944

Query: 468  RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
               T+  L++  CK    K A  L   ++H     D+V  + +I   C  G +  A D  
Sbjct: 945  TTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFY 1004

Query: 528  LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
             +++ K  +P+  T+  L+      +  S+  ++L  +    LV   L   S+
Sbjct: 1005 EEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGKSQ 1057


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 221/424 (52%), Gaps = 3/424 (0%)

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           G++    R F+++     +  V +   +++GLC+  +  +  KL +E+  +     K +V
Sbjct: 204 GQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKG---VKANV 260

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           VTYN+ I+G  K   +    E+L  M+   +  NV+TY  LI GF  +   +EA+ LF E
Sbjct: 261 VTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEE 320

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M + G++ DV  + ++I+ NC+ G + +   L + M  +G+ P   TY +L+ G C  G+
Sbjct: 321 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQ 380

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +  A+ L   M  KG   +   +N LI+  C+   V++A+ L   M  + +   V  YN+
Sbjct: 381 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 440

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           + SGL ++    +A  L+  M    V P++ +F T ID  CK G  +EA +VF+ +    
Sbjct: 441 IASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 500

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I TYN LI+G  K G +K A KL   L+++G IPDV TC+++IH  C +G++D A 
Sbjct: 501 NVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMAL 560

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
            L  +M  +  VP+ VT+  ++ G  ++ +  +   L  +M    L   D   SS V  L
Sbjct: 561 KLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620

Query: 585 LSKD 588
            S +
Sbjct: 621 HSAE 624



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 203/409 (49%), Gaps = 32/409 (7%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF  M+ +     + S TI+L  L K    +    L   + + G+  ++   N  I    
Sbjct: 212 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF 271

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K     G   +L  + +     N VT+  LI+G    G+I EA RLF+++     + +V 
Sbjct: 272 KRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 331

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNE--------FGA----ICKP------------- 222
            + ++I+  CR+ N   AL LF+EM ++        +GA    +CK              
Sbjct: 332 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 391

Query: 223 -------DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                  + V +N++IDG C+ G VD+A  L + M+ + +  +V  YNS+  G C ++  
Sbjct: 392 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 451

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            EAK L   M++ GV P+ ++F  +I+  CK+G   +  R+   M ++G  P+ +TYN L
Sbjct: 452 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 511

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +DG+   G +  A +L   + ++G   DVY+   LI+  C D KV+ A+ L+ EM    +
Sbjct: 512 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 571

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            P+V+TY  ++SGL + G   +A KL D+M+   + PD   +++ +  L
Sbjct: 572 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 176/345 (51%), Gaps = 3/345 (0%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL+ FE M  +   I +   + Y   +  L + G VD       +M + ++   V +   
Sbjct: 174 ALEAFEHMEKKGFHIDERSCLVY---LLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 230

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           ++ G C   D +  + L  E+   GV+ +VVT+NA I    K   +  V  +L LM + G
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           V  + VTY  L+ GF  +G+I  A+ LF  M  KG   DVY Y  +I+ NC+   V+ A+
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+ EM  + + PS  TY  L+ G+ + G +  A  L+++MQ   +  +   F T IDG 
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C++G V EA+++   +     E  +  YN + +GLCK+ R   A  L   +  +G  P+ 
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 470

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
           ++ +T+I   CKEG   +A  +  +ME K  VP+ +T+  L+ G+
Sbjct: 471 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY 515



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 187/425 (44%), Gaps = 20/425 (4%)

Query: 184 PNVVTFNTLINGLCRTRNT--LVALKLFEEMVNEFGAICKPD-----VVTYNSIIDGLCK 236
           P++  + TLI  L R+R +  L   + F E+ + F      D     V    S++D  C 
Sbjct: 85  PDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACN 144

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +   ++AK    + K  ++   V   N +         + EA   F  M   G   D  +
Sbjct: 145 ESKCNRAK---FKEKFFDLLFRVYADNKM---------FGEALEAFEHMEKKGFHIDERS 192

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
               +    + G++D   R    M+   V     +   ++DG C  G +   R+L   + 
Sbjct: 193 CLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVA 252

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           +KG + +V +YN  I    K   +     +   M  E +  +V+TY  L+ G   +G + 
Sbjct: 253 AKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIE 312

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +L ++M+   +  D + + + I   C++G V  A+ +F  + +        TY  LI
Sbjct: 313 EAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALI 372

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G+CK G+++ A  L + +Q KG   + V  +T+I   C+ G +D+A  L + ME K   
Sbjct: 373 HGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLE 432

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
                + ++  G  + N+K +   LL  M    +  + +S ++ ++D+  K+  + E   
Sbjct: 433 SDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT-LIDIYCKEGNFVEAKR 491

Query: 597 QFRHL 601
            FR +
Sbjct: 492 VFREM 496



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 3/172 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA      M++   SP   SFT L+ +  K   +     +F+ +   G  P++   N+L
Sbjct: 452 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 511

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K G    A  +   +      P+  T   LI+G C +G++  A +LF ++     
Sbjct: 512 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 571

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            PNVVT+  +I+GL +   +  A KL++EM  E G    PD   Y+S++  L
Sbjct: 572 VPNVVTYTAMISGLSKDGRSEEAFKLYDEM-KETG--LTPDDTVYSSLVGSL 620


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 237/497 (47%), Gaps = 33/497 (6%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           T+  IL + L K +Q+     LF ++  +G+  D +V    I   C+     GA  ++ R
Sbjct: 188 TASQILFS-LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVR 246

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +       + V +N L+ GLC   R+ EA  +   +       + VT+ TL+ G CR   
Sbjct: 247 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 306

Query: 202 TLVALKLFEEMV-------------------------NEFGAICK-------PDVVTYNS 229
             +AL++  +M+                           F   CK       P+V  YN+
Sbjct: 307 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 366

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +ID LCK+   D A  L  +M  R + PN +TY  LI   C     ++A CLF +M D G
Sbjct: 367 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 426

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++  V  +N++IN  CK G +D+   LL  M++ G+ P   +Y+ L+ G C  G +S   
Sbjct: 427 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 486

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           EL   M  +G   + Y++  LIN  CKD+K+++A  L+ +M+   + P+ +T+N ++ G 
Sbjct: 487 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 546

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
             VGN+  A +L D+M    + PD++T+ + I GLC    V +A +    + N    L  
Sbjct: 547 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 606

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            +   L+ G  + GR      L+  +  +G   D+V+ + +++   K+   +K+  L  +
Sbjct: 607 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 666

Query: 530 MEAKNCVPSEVTFCTLL 546
           M+ +   P ++ +  ++
Sbjct: 667 MKEQGVKPDDIFYTCMI 683



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 240/503 (47%), Gaps = 37/503 (7%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  L+  L KN+++D    LFK +   GL P+     +LI+ LCK G+   A  +
Sbjct: 359 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 418

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             ++           +N LING C +G +  A  L   +      P   +++ LI GLCR
Sbjct: 419 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 478

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             +    ++L  EM     A    +  T+ ++I+G CKD  +D+A  L  +M D N+ PN
Sbjct: 479 NGDLSSCMELHREMAERGIAW---NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 535

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +T+N +I G+C V + ++A  L+ +M++ G++PD  T+ ++I+  C    + K N  + 
Sbjct: 536 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 595

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            +       +  +  +L+ GF   GR +    L+  M  +G + D+ S+ I++ A  K  
Sbjct: 596 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 655

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
             E +  L+REM  + ++P  I Y  ++  L +  N+  AL   D+M ++   P++ T  
Sbjct: 656 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 715

Query: 439 TYIDGLCKNGFVLEA-----------VQVFQAIRNCKCEL-------------------- 467
             I+ LCK+G++  A           V   +   NC  +                     
Sbjct: 716 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 775

Query: 468 ---RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
               I ++N LI GLCK G+++ A  L  ++   G  PD ++ ST+IH LCK G ++KA 
Sbjct: 776 HLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAF 835

Query: 525 DLLLDMEAKNCVPSEVTFCTLLR 547
           +L  +M  K   P  V +   +R
Sbjct: 836 ELWNEMLYKGLKPDVVAYNIFIR 858



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 237/500 (47%), Gaps = 3/500 (0%)

Query: 59  NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
           N+   EAV   + M+ +  +    ++  L+    + ++ +  + +   +   G  P    
Sbjct: 269 NMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 328

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            + +I+ L K  +   AF +  ++      PN   +N LI+ LC   R  +A RLFK++ 
Sbjct: 329 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 388

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
               +PN VT+  LI+ LC+      AL LF++M ++     K  V  YNS+I+G CK G
Sbjct: 389 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG---IKVTVYPYNSLINGYCKQG 445

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +D+A+ LL  M    + P   +Y+ LI G C   D      L  EM + G+  +  TF 
Sbjct: 446 SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFT 505

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           A+IN  CKD KMD+  RL + MI   V P+ VT+N +++G+CLVG I +A +L+  MV  
Sbjct: 506 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM 565

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G + D Y+Y  LI+  C    V  A     ++ +     +  +   LL G F+ G   + 
Sbjct: 566 GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTET 625

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L D+M +  V  D  +F   +    K     ++  +F+ ++    +     Y C+I+ 
Sbjct: 626 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 685

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L K   +  A   + ++   G  P+ VT + +I+ LCK G +  A  L  +M A N +P+
Sbjct: 686 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 745

Query: 539 EVTFCTLLRGFVQNNKKSKV 558
           + T+   L  F       K 
Sbjct: 746 KFTYNCFLDYFATEGDMEKA 765



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 237/534 (44%), Gaps = 39/534 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A   F  M      P   ++ IL+  L K    +  + LF ++   G+   ++  N L
Sbjct: 378 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSL 437

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTP--------------------------------- 149
           IN  CK G    A  +L  +++   TP                                 
Sbjct: 438 INGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGI 497

Query: 150 --NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
             N  TF  LING C + ++ EAARLF K+      PN VTFN +I G C   N   A +
Sbjct: 498 AWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQ 557

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L+++MV E G   KPD  TY S+I GLC    V KA E +  +++     N  +  +L+ 
Sbjct: 558 LYDQMV-EMG--LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 614

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GF     + E   L+ EM   GV+ D+V+F  ++    K    +K   L   M ++GV P
Sbjct: 615 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 674

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D + Y  ++D       + +A   +  MV  G   +  ++ +LIN  CK   +  A  L 
Sbjct: 675 DDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLC 734

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           +EML+  + P+  TYN  L      G++  A  L   M L   +    +F   I GLCK 
Sbjct: 735 KEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKA 793

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + EA+ +   I          +Y+ +I+ LCKMG +  A +L++ + +KG  PDVV  
Sbjct: 794 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 853

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           +  I W    G+ DKA  +  +M      P+  T+  LL G      K + ++L
Sbjct: 854 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQALLL 907



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 233/499 (46%), Gaps = 39/499 (7%)

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           VLG  L S  T N  T + ++  L    +   A  LF K+       +   +   I   C
Sbjct: 173 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 232

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
            +RN   A  L   M +E     K   V YN ++ GLCK+  V +A E+   M +  +  
Sbjct: 233 ESRNLDGARGLVVRMESEG---VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTA 289

Query: 258 NVITYNSLICGFCCVDDWK-----------------EAKCLFI----------------- 283
           + +TY +L+ GFC +++ +                 EA C F+                 
Sbjct: 290 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 349

Query: 284 -EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            ++ D G+ P+V  +NA+I+  CK+ + D  +RL + M  RG+ P+ VTY  L+   C  
Sbjct: 350 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 409

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           G I  A  LF  M  KG +  VY YN LIN  CK   ++ A  L   M+ E + P+  +Y
Sbjct: 410 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 469

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           + L++GL + G+L   ++L  +M    +  +++TF   I+G CK+  + EA ++F  + +
Sbjct: 470 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 529

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                   T+N +I G C +G ++ A +L+ ++   G  PD  T  ++I  LC    + K
Sbjct: 530 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 589

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           AN+ + D+E    V +  +   LL GF +  + ++   L  +MA   + +  +S +  V 
Sbjct: 590 ANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 649

Query: 583 DLLSKDKKYRECLNQFRHL 601
             L +  K + C+  FR +
Sbjct: 650 AALKQHDKEKSCV-LFREM 667



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 166/349 (47%), Gaps = 1/349 (0%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I  N  T + ++     +  +  A+ LF +M+ +GV  D   + A I   C+   +D  
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
             L+  M   GV    V YN LM G C   R+  A E+   MV+ G   D  +Y  L+  
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C+ +++E A+ +  +M+     PS    + ++  L +   + +A  L  K+    +VP+
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            F +   ID LCKN    +A ++F+ +     E    TY  LI+ LCK G ++ A  LF 
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 420

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           +++ KG    V   +++I+  CK+G +D+A  LL  M  +   P+  ++  L+ G  +N 
Sbjct: 421 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 480

Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             S  + L  +MA   +  ++ + ++ +++   KDKK  E    F  ++
Sbjct: 481 DLSSCMELHREMAERGIAWNNYTFTA-LINGFCKDKKMDEAARLFDKMI 528


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 243/473 (51%), Gaps = 3/473 (0%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
            ++  +L    K  ++   + + + +  + +  D++  N++I+ LC++  ++ AF++L R
Sbjct: 190 ATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKR 249

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           + +   TP+  T+N LING   EG+I  A  +F  +      P+V T+ T+I+G CR R 
Sbjct: 250 MRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRR 309

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              AL +  EM  E   +  P  +TY+++++G CK   +  A +L++ +K R I  N   
Sbjct: 310 IDKALSVLSEM--EITGV-MPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTM 366

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
              LI GFC V +  +AK +   M+++G+ PDVVT++A+IN  C+  KM +   +L  M 
Sbjct: 367 CTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQ 426

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
           + G+ P+ V Y +L+  +C  G +  A + FV +  +G   +   +N L+ A  ++  + 
Sbjct: 427 KSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMIT 486

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           +A    + M    I  + +++N ++      G + +A  + D M      P+  T+   +
Sbjct: 487 EAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLL 546

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
            GLC+ G +++A Q    + +    +  +T+N L+ G+CK G L  A  +  ++     +
Sbjct: 547 RGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCL 606

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           PD+ T + ++   C++G++  A  +L  M  K  VP  V +  LL G +   +
Sbjct: 607 PDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQ 659



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 138/573 (24%), Positives = 268/573 (46%), Gaps = 40/573 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A      M++    P + +++ L+  + +  +      +  R+  +G+ P+  +   L
Sbjct: 381 SKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 440

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   CK G    A      I R     N V  N L+     EG I EA    + ++    
Sbjct: 441 ICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNI 500

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V+FN +I+  C     + A  ++++MV  +G    P+V TY +++ GLC+ G + +
Sbjct: 501 SFNSVSFNCIIDSYCHRGKIVEAFSVYDDMV-RYGH--SPNVCTYQNLLRGLCQGGHLVQ 557

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK+ +  + D     +  T+N+L+ G C      EA  +  +M+ N   PD+ T+  +++
Sbjct: 558 AKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLS 617

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS-------- 354
             C+ GK+     +L++M+++GV PDTV Y  L++G    G++  A  +F          
Sbjct: 618 GFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLY 677

Query: 355 ------------------------MVSKGCRHDVY----SYNILINANCKDQKVEDAVCL 386
                                   M+S   +++VY    SYNIL++   K  +   ++ L
Sbjct: 678 ADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYL 737

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           Y+ M+ + IRP  +TY  L+ GL + G +  A+K ++KM L  + PD   F   I    +
Sbjct: 738 YKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSE 797

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
              +  A+++F  ++        +T++ +INGL +   L  + ++ H +   G  P+   
Sbjct: 798 KSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTH 857

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
              +++  C+ G++D+A  L  +M+A   VP+EV   +++RG  +  K  + V++   M 
Sbjct: 858 YIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMM 917

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
              +V +  + ++ ++  L K+ K  + L+  R
Sbjct: 918 RSGMVPTVATFTT-LMHSLCKESKIADALHLKR 949



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 245/484 (50%), Gaps = 13/484 (2%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR-LFKKLN 178
           N +I+  C  G    AF V   ++R   +PN  T+  L+ GLC  G +++A + +F  L+
Sbjct: 508 NCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLD 567

Query: 179 VFACDPNVV---TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +    P+ V   TFN L+ G+C+      AL + E+MV      C PD+ TY  ++ G C
Sbjct: 568 I----PSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNN---CLPDIHTYTILLSGFC 620

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM-DNGVQPDV 294
           + G +  A  +L  M ++ + P+ + Y  L+ G       K A  +F E++   G+  D 
Sbjct: 621 RKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADC 680

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           + +N+++N   K G ++ + R++  M Q  V P++ +YN LM G+   G+ S++  L+  
Sbjct: 681 IAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKY 740

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           MV KG R D  +Y +LI    +   ++ AV    +M+ E I P  + ++ L++   +   
Sbjct: 741 MVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSK 800

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           + +AL+L + M+   + P S TF+  I+GL +  ++ ++ +V   +     +     Y  
Sbjct: 801 MHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIA 860

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L+N  C++G +  A +L   ++  G +P  V  S++I  LC+ G++++A  +  +M    
Sbjct: 861 LVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSG 920

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
            VP+  TF TL+    + +K +  + L   M   +L V  +S +  +   L KDK   + 
Sbjct: 921 MVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITG-LCKDKHISDA 979

Query: 595 LNQF 598
           L+ +
Sbjct: 980 LDLY 983



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 236/480 (49%), Gaps = 12/480 (2%)

Query: 64   EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
            +A  F  C++ +  +    +F  LL  + K    D  + + +++  N   PD+    +L+
Sbjct: 557  QAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILL 616

Query: 124  NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----NV 179
            +  C+ G    A V+L  +L     P+TV +  L+NGL  EG++  A+ +F+++     +
Sbjct: 617  SGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGL 676

Query: 180  FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDG 238
            +A   + + +N+L+NG  +  N     ++  +M  NE      P+  +YN ++ G  K G
Sbjct: 677  YA---DCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEV----YPNSASYNILMHGYVKRG 729

Query: 239  FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
               K+  L   M  + I P+ +TY  LI G         A     +M+  G+ PD + F+
Sbjct: 730  QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFD 789

Query: 299  AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
             +I    +  KM    RL   M    ++P + T++++++G      + ++ E+   M+  
Sbjct: 790  ILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQV 849

Query: 359  GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
            G + +   Y  L+NA C+  +++ A  L  EM +  I P+ +  ++++ GL + G L +A
Sbjct: 850  GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEA 909

Query: 419  LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            + +   M  + +VP   TF T +  LCK   + +A+ + + +  C+ ++ + +YN LI G
Sbjct: 910  VIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITG 969

Query: 479  LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
            LCK   +  A  L+  ++ KG  P+V T  T+   +   G+M    +LL D+E +  +P+
Sbjct: 970  LCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPA 1029



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 210/443 (47%), Gaps = 4/443 (0%)

Query: 61   TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
            T +EA+   + M+K    P + ++TILL+   +  +    + + + +   G+ PD     
Sbjct: 589  TLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYT 648

Query: 121  LLINCLCKMGITSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
             L+N L   G    A  V   I+ +     + + +N L+NG    G +    R+   +  
Sbjct: 649  CLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQ 708

Query: 180  FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
                PN  ++N L++G  +      +L L++ MV +     +PD VTY  +I GL + G 
Sbjct: 709  NEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG---IRPDNVTYRLLILGLSECGL 765

Query: 240  VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
            +D A + L +M    I P+ + ++ LI  F        A  LF  M    + P   TF+A
Sbjct: 766  IDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSA 825

Query: 300  MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
            MIN   +   +D+ + +L  M+Q G+ P+   Y +L++  C VG I RA  L   M + G
Sbjct: 826  MINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIG 885

Query: 360  CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
                  + + +I   C+  K+E+AV ++  M+   + P+V T+ TL+  L +   + DAL
Sbjct: 886  IVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADAL 945

Query: 420  KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
             L   M+L  +  D  ++   I GLCK+  + +A+ ++  +++      + TY  L   +
Sbjct: 946  HLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAM 1005

Query: 480  CKMGRLKTACKLFHRLQHKGPIP 502
               GR++   +L   ++ +G IP
Sbjct: 1006 YSTGRMQNGEELLEDIEERGLIP 1028



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 124/534 (23%), Positives = 217/534 (40%), Gaps = 112/534 (20%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP-NVVTFNTLINGLCRTRNTLVA 205
           F  + V  N ++  L  EG   +   LF + ++    P +V T N L+N LC    T   
Sbjct: 116 FKASPVACNSILKALVEEGE-SKYVWLFLRESLARKFPLDVTTCNILLNSLC----TNGE 170

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
            +  E+M+ +  + C  +  TYN+I+    K G    A  +L  M+  +I  ++ TYN +
Sbjct: 171 FRKAEDMLQKMKSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIM 230

Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGV 325
           I   C +     A  L   M  + + PD  T+N +IN    +GK++    +   M+++ +
Sbjct: 231 IDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTL 290

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK--------D 377
            P   TY +++DG+C   RI +A  +   M   G      +Y+ L+N  CK        D
Sbjct: 291 VPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALD 350

Query: 378 QKVE-----------------DAVC----------LYREMLSERIRPSVITYNTLLSGLF 410
             V+                 D  C          + + ML + I P V+TY+ L++G+ 
Sbjct: 351 LMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMC 410

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF------------- 457
           ++  + +  +++ +MQ + ++P+   + T I   CK G+V  A++ F             
Sbjct: 411 RMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPV 470

Query: 458 ------------------QAIRNCKCELRIE----TYNCLINGLCKMGRLKTACKLFHRL 495
                             +  R     + I     ++NC+I+  C  G++  A  ++  +
Sbjct: 471 IHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDM 530

Query: 496 QHKGPIPDVVTCSTMIHWLC-----------------------------------KEGQM 520
              G  P+V T   ++  LC                                   K G +
Sbjct: 531 VRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTL 590

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           D+A D+   M   NC+P   T+  LL GF +  K    +V+L +M  EK VV D
Sbjct: 591 DEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVML-QMMLEKGVVPD 643



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 158/351 (45%), Gaps = 1/351 (0%)

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           V +  +I    K+  V  A   +  M D     + +  NS++       + K       E
Sbjct: 86  VVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFLRE 145

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
            +      DV T N ++N  C +G+  K   +L+ M +     ++ TYN+++  +   GR
Sbjct: 146 SLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KSCCLSNSATYNTILHWYVKKGR 204

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
              A  +   M     + D+Y+YNI+I+  C+ ++   A  L + M  + + P   TYNT
Sbjct: 205 FKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNT 264

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
           L++G F  G +  A  + + M    +VP   T+ T IDG C+N  + +A+ V   +    
Sbjct: 265 LINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITG 324

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                 TY+ L+NG CK+  L  A  L   L+ +G   +   C+ +I   C+ G++ KA 
Sbjct: 325 VMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAK 384

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
            +L  M      P  VT+  L+ G  +  K  +   +L +M    ++ +D+
Sbjct: 385 QILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDV 435



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 147/319 (46%), Gaps = 1/319 (0%)

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           LL++  R  + N + +  LI  +       +A      M D G +   V  N+++    +
Sbjct: 73  LLRIISRFDSTNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVE 132

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G+   V   L   + R    D  T N L++  C  G   +A ++   M S  C  +  +
Sbjct: 133 EGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKS-CCLSNSAT 191

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN +++   K  + + A+C+  +M  + I+  + TYN ++  L ++     A  L+ +M+
Sbjct: 192 YNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMR 251

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            +D+ PD  T+ T I+G    G +  A  VF  +        + TY  +I+G C+  R+ 
Sbjct: 252 KDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRID 311

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A  +   ++  G +P  +T S +++  CK   +  A DL++D++++    ++     L+
Sbjct: 312 KALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILI 371

Query: 547 RGFVQNNKKSKVVVLLHKM 565
            GF Q  + SK   +L  M
Sbjct: 372 DGFCQVGEISKAKQILKSM 390



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 1/192 (0%)

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           RE L+ +    V T N LL+ L   G    A  ++ KM+ +  + +S T+ T +    K 
Sbjct: 144 RESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMK-SCCLSNSATYNTILHWYVKK 202

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G    A+ V + +     +  I TYN +I+ LC++ R   A  L  R++     PD  T 
Sbjct: 203 GRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTY 262

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +T+I+    EG+++ A  +   M  +  VPS  T+ T++ G+ +N +  K + +L +M  
Sbjct: 263 NTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEI 322

Query: 568 EKLVVSDLSLSS 579
             ++ S+L+ S+
Sbjct: 323 TGVMPSELTYSA 334



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
           K  L + T N L+N LC  G  + A  +  +++    + +  T +T++HW  K+G+   A
Sbjct: 150 KFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMK-SCCLSNSATYNTILHWYVKKGRFKAA 208

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             +L DME  +      T+  ++    +  + ++  +LL +M  + L   + + ++ +  
Sbjct: 209 LCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLING 268

Query: 584 LLSKDK-KYRECLNQFRHLL 602
              + K  +  C+  F H+L
Sbjct: 269 FFGEGKINHARCV--FNHML 286


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 267/521 (51%), Gaps = 7/521 (1%)

Query: 84  FTILLTMLA--KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           +T+ + M A  K  +++ V   FK     GL  D    ++L+  +C+    + A  +L  
Sbjct: 221 YTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKE 280

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           +    + P+  T+  +I     +G  +EA RL  ++       NV+   +L+ G C   +
Sbjct: 281 MREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGD 340

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
             +AL+LF+E+V E G +  PDVV ++ +I+G  K G ++KA EL  +MK   I PNV  
Sbjct: 341 VNLALQLFDEVV-EGGVV--PDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFI 397

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
            NSL+ GF   +  + A  LF E +++G+  +VVT+N ++ +  + GK+++   L E M+
Sbjct: 398 VNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMV 456

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            +G+ P  V+YN+L+ G C  G + +A  +  S++ +G + +  +Y +LI+   K    E
Sbjct: 457 SKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSE 516

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
            A  ++ +M++  I P+  T+NT+++GL + G + +    ++       V  S T+ + I
Sbjct: 517 RAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSII 576

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DG  K G V  A+  ++ +        + TY  LI+GLCK  ++  A ++   +++KG  
Sbjct: 577 DGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMK 636

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            DVV  S +I   CK   M+ A+    ++      P+ V + +++ GF+  N     + L
Sbjct: 637 LDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNL 696

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
             +M   K V  DL + + ++  L K+ K    L+ +  +L
Sbjct: 697 HQEMIKNK-VPCDLQVYTSIIGGLLKEGKLSLALDLYSEML 736



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 239/486 (49%), Gaps = 4/486 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N A+  FD +++    P +  F++L+   +K    +    L+ R+   G+ P++F++N L
Sbjct: 342 NLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSL 401

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +    +  +   A+ +    +    T N VT+N L+  L   G++ EA  L++K+     
Sbjct: 402 LEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGI 460

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++V++N LI G C+      A  + + ++ E G   KP+ VTY  +IDG  K G  ++
Sbjct: 461 TPSLVSYNNLILGHCKKGCMDKAYSMLKSIL-ERG--LKPNAVTYTLLIDGFFKKGDSER 517

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +  QM   NI P   T+N++I G        E +      +  G     +T+N++I+
Sbjct: 518 AFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIID 577

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+G +D        M + G++PD +TY SL+DG C   +I  A E+   M  KG + 
Sbjct: 578 GFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKL 637

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV +Y+ LI+  CK   +E A   + E+L   + P+ + YN+++SG   + N+  AL L 
Sbjct: 638 DVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLH 697

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M  N V  D   + + I GL K G +  A+ ++  + +      I  Y  LINGL   
Sbjct: 698 QEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNN 757

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G+L+ A K+   +      P V+  + +I    +EG + +A  L  +M  K  VP + T+
Sbjct: 758 GQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTY 817

Query: 543 CTLLRG 548
             L+ G
Sbjct: 818 DILVNG 823



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 233/474 (49%), Gaps = 4/474 (0%)

Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
           + LF  +   G+ PD+ + ++LIN   K+G    A+ +  R+      PN    N L+ G
Sbjct: 345 LQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEG 404

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
              +  +  A  LF +  V     NVVT+N L+  L        A  L+E+MV++     
Sbjct: 405 FHEQNLLEHAYGLFDEA-VEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKG---I 460

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            P +V+YN++I G CK G +DKA  +L  + +R + PN +TY  LI GF    D + A  
Sbjct: 461 TPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFV 520

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +F +MM   + P   TFN +IN   K G++ +    L   I++G    ++TYNS++DGF 
Sbjct: 521 VFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFF 580

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G +  A   +  M   G   DV +Y  LI+  CK  K+  A+ ++ +M  + ++  V+
Sbjct: 581 KEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVV 640

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y+ L+ G  ++ ++  A K   ++    + P++  + + I G      +  A+ + Q +
Sbjct: 641 AYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEM 700

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
              K    ++ Y  +I GL K G+L  A  L+  +  K  +PD+V  + +I+ L   GQ+
Sbjct: 701 IKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQL 760

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           + A+ +L +M+  N  PS + +  L+ G  +     +   L  +M  + LV  D
Sbjct: 761 ENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDD 814



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 130/387 (33%), Positives = 203/387 (52%), Gaps = 9/387 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           NEA   ++ M+    +P + S+  L+    K    D   S+ K +   GL P+     LL
Sbjct: 446 NEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLL 505

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K G +  AFVV  +++ +   P   TFN +INGL   GR+ E      KLN F  
Sbjct: 506 IDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQ---DKLNNFIK 562

Query: 183 DPNV---VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
              V   +T+N++I+G  +      AL  + EM  E G    PDV+TY S+IDGLCK   
Sbjct: 563 QGFVSTSITYNSIIDGFFKEGAVDSALLAYREMC-ESG--ISPDVITYTSLIDGLCKSNK 619

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +  A E+   MK + +  +V+ Y++LI GFC + D + A   F E++D G+ P+ V +N+
Sbjct: 620 IGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNS 679

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           MI+       M+    L + MI+  V  D   Y S++ G    G++S A +L+  M+SK 
Sbjct: 680 MISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKD 739

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              D+  Y +LIN    + ++E+A  + +EM    I PSV+ YN L++G F+ GNL +A 
Sbjct: 740 IVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAF 799

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCK 446
           +L D+M    +VPD  T+   ++G  K
Sbjct: 800 RLHDEMLDKGLVPDDTTYDILVNGKLK 826



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 210/462 (45%), Gaps = 46/462 (9%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R  F  ++  FN+L+       +I +A   F+ +      P V   N L+  + R     
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVC 202

Query: 204 VALKLFEEMVNE--FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
            A +L++EMV    +G     D  T + ++    K+G  ++ ++   + K R +  +   
Sbjct: 203 DARQLYDEMVERGIYG-----DCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAA 257

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y+ L+   C   D   A  L  EM + G  P   T+ A+I    K G   +  RL + M+
Sbjct: 258 YSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMV 317

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             G+  + +   SLM G+C++G ++ A +LF                        D+ VE
Sbjct: 318 SVGLPMNVIVTRSLMKGYCVLGDVNLALQLF------------------------DEVVE 353

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
             V            P V+ ++ L++G  +VG++  A +L  +M+L  + P+ F   + +
Sbjct: 354 GGVV-----------PDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLL 402

Query: 442 DGLCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           +G  +   +  A  +F +A+ +      + TYN L+  L ++G++  AC L+ ++  KG 
Sbjct: 403 EGFHEQNLLEHAYGLFDEAVEHGIT--NVVTYNILLKWLGELGKVNEACNLWEKMVSKGI 460

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P +V+ + +I   CK+G MDKA  +L  +  +   P+ VT+  L+ GF +     +  V
Sbjct: 461 TPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFV 520

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +  +M A  +  +D + ++ V++ L K  +  E  ++  + +
Sbjct: 521 VFEQMMAANIAPTDHTFNT-VINGLGKTGRVSETQDKLNNFI 561



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 64/132 (48%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MIK K    +  +T ++  L K  +    + L+  + S  + PD+ +  +LIN L   G 
Sbjct: 700 MIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQ 759

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L  +  +  TP+ + +N LI G   EG + EA RL  ++      P+  T++ 
Sbjct: 760 LENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDI 819

Query: 192 LINGLCRTRNTL 203
           L+NG  +  +TL
Sbjct: 820 LVNGKLKVSHTL 831


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 250/496 (50%), Gaps = 25/496 (5%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           +L T+L +N+    +  +++ +  +G  P++F  N+L+  LCK     GA  +L  +   
Sbjct: 151 VLDTLLGENR-IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 209

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
              PN V++  +I+ +C  G + E  +L ++      +P V  +N LINGLC+ R+    
Sbjct: 210 GCCPNAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNALINGLCKERDYKGG 264

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSL 265
           ++L  EMV +      P+V++Y+++I+ L   G ++ A  LL QM  R  +PN+ T +SL
Sbjct: 265 VELMSEMVEKG---ISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSL 321

Query: 266 ICG-------FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           + G       F  +D W +    F      G+QP+VV +N ++   C  G +DK   +  
Sbjct: 322 VKGCFVRGTTFDALDMWNQMIRGF------GLQPNVVAYNTLVQGFCSHGNIDKAVSVFL 375

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M + G +P+  TY SL++GF   G +  A  ++  M++ GC  +V  Y  ++ A C+  
Sbjct: 376 HMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHS 435

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTF 437
           K ++A  L   M  E   PSV T+N  + GL   G L  A K+  +M Q     P+  T+
Sbjct: 436 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTY 495

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              +DGL K   + EA  + + I     E    TYN L++G C  G    A +L  ++  
Sbjct: 496 NELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMV 555

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDL--LLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
            G  PD +T + +I   CK+G+ ++A  +  L+    +   P  +++  ++ G  ++N +
Sbjct: 556 NGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCR 615

Query: 556 SKVVVLLHKMAAEKLV 571
              V+L  +M +E+++
Sbjct: 616 EDGVILFERMISERII 631



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 225/453 (49%), Gaps = 18/453 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   S+T +++ + +         L +R       P + V N LIN LCK     G   +
Sbjct: 213 PNAVSYTTVISSMCEVGMVKEGRQLAERFE-----PVVSVYNALINGLCKERDYKGGVEL 267

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           +  ++    +PN ++++ LIN L   G+I  A  L  ++    C PN+ T ++L+ G   
Sbjct: 268 MSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFV 327

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
              T  AL ++ +M+  FG   +P+VV YN+++ G C  G +DKA  + L M++   +PN
Sbjct: 328 RGTTFDALDMWNQMIRGFG--LQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPN 385

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           + TY SLI GF      + A  ++ +M+ +G  P+VV + +M+   C+  K  +   L+E
Sbjct: 386 IRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIE 445

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-GCRHDVYSYNILINANCKD 377
           +M +    P   T+N+ + G C  GR+  A ++F  M  +  C  ++ +YN L++   K 
Sbjct: 446 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKA 505

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            ++E+A  L RE+    +  S  TYNTLL G    G  G AL+L+ KM +N   PD  T 
Sbjct: 506 NRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITM 565

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELR--IETYNCLINGLCKMGRLKTACKLFHRL 495
              I   CK G    AVQ+   +   + + R  + +Y  +I GLC+    +    LF R+
Sbjct: 566 NMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERM 625

Query: 496 QHKGPIPDVVTCSTMIHWLCKE-GQMDKANDLL 527
             +  IP       ++  +C+E  +M   ND+L
Sbjct: 626 ISERIIP-------ILRSVCQEAARMTIPNDVL 651



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 251/540 (46%), Gaps = 54/540 (10%)

Query: 65  AVYFFDCMIK---MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF--PDLFVL 119
           A++FF  +      K +P   +F +++  LA + Q D+V  L +++   G     DLF+ 
Sbjct: 58  ALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS 115

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
             +I+   ++G+   A  +  RI      P+   +N +++ L  E RI     +++ +  
Sbjct: 116 --VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR 173

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
              +PNV T+N L+  LC+      A KL  EM N+    C P+ V+Y ++I  +C+ G 
Sbjct: 174 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG---CCPNAVSYTTVISSMCEVGM 230

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           V + ++L          P V  YN+LI G C   D+K    L  EM++ G+ P+V++++ 
Sbjct: 231 VKEGRQL-----AERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYST 285

Query: 300 MINYNCKDGKMDKVNRLLELMIQR------------------------------------ 323
           +IN     G+++    LL  M++R                                    
Sbjct: 286 LINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGF 345

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P+ V YN+L+ GFC  G I +A  +F+ M   GC  ++ +Y  LIN   K   +E A
Sbjct: 346 GLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGA 405

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           V ++ +ML+    P+V+ Y +++  L +     +A  LI+ M   +  P   TF  +I G
Sbjct: 406 VYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 465

Query: 444 LCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
           LC  G +  A +VF Q  +  +C   I TYN L++GL K  R++ A  L   +  +G   
Sbjct: 466 LCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 525

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
              T +T++H  C  G    A  L+  M      P E+T   ++  + +  K  + V +L
Sbjct: 526 STSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQML 585



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 213/460 (46%), Gaps = 13/460 (2%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFK--KLNVFACDPNVVTFNTLINGLCRTRNTLV 204
           F    +TF  +I  L  +G++     L +  KL  F C  ++  F ++I+   +      
Sbjct: 71  FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL--FISVISVYRQVGLAER 128

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A+++F   + EFG  C P V  YN ++D L  +  +     +   MK     PNV TYN 
Sbjct: 129 AVEMFYR-IKEFG--CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 185

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+   C  +    AK L +EM + G  P+ V++  +I+  C+ G + +  +L E      
Sbjct: 186 LLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF---- 241

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             P    YN+L++G C         EL   MV KG   +V SY+ LIN      ++E A 
Sbjct: 242 -EPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAF 300

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN-DVVPDSFTFATYIDG 443
            L  +ML     P++ T ++L+ G F  G   DAL + ++M     + P+   + T + G
Sbjct: 301 SLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQG 360

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C +G + +AV VF  +    C   I TY  LING  K G L+ A  +++++   G  P+
Sbjct: 361 FCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPN 420

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           VV  ++M+  LC+  +  +A  L+  M  +NC PS  TF   ++G     +      +  
Sbjct: 421 VVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 480

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
           +M  +     ++   ++++D L+K  +  E     R +  
Sbjct: 481 QMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 520


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 244/495 (49%), Gaps = 28/495 (5%)

Query: 68  FFDCMIKMKPSPGMTSFTI--LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           FFD + + + S  +  F    LL +LA+++ +  +  + + +    + P    ++++I  
Sbjct: 79  FFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQA 138

Query: 126 LCKMGITSGAFVVLGRILRS-CFTPNTVTFNFLIN--------------------GLCAE 164
               G+   A  +   +L++  + P+ +  N L+N                    GLC E
Sbjct: 139 YSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKE 198

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPD 223
           G++ E  +L +      C PN++ +NTLI+G C+  +  +A  LF E+ +  F     P 
Sbjct: 199 GKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGF----LPT 254

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V TY +II+G CK G       LL++M  R +  NV  YN++I          +A     
Sbjct: 255 VETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIE 314

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
            M++ G +PD+VT+N +I+ +C+DGK+ + ++LLE  + +G+ P+  +Y  L+  +C  G
Sbjct: 315 GMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 374

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
              RA    + M  +G + D+ +Y  L++      +V+ A+ +  +ML   + P    YN
Sbjct: 375 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYN 434

Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
            L+SGL +   L  A  L+ +M    V+PD+F +AT +DG  +NG + EA ++F+     
Sbjct: 435 ILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK 494

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                I  YN +I G CK G +K A    +R++ +   PD  T ST+I    K+  +D A
Sbjct: 495 GMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGA 554

Query: 524 NDLLLDMEAKNCVPS 538
             +  +M    C P+
Sbjct: 555 QKMFREMVKMKCKPN 569



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 216/490 (44%), Gaps = 47/490 (9%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFK-RLNSNGLFPDLFVLNLLINCLCKMG------ 130
           SP   + +I++   + +   +  + L+   L +   FPD+   N L+N L K+G      
Sbjct: 126 SPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIAR 185

Query: 131 ---------------ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
                          +  G  ++  R  + C  PN + +N LI+G C +G +  A  LF 
Sbjct: 186 KFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCI-PNIIFYNTLIDGYCKKGDMEMANGLFI 244

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +L +    P V T+  +ING C+  +     +L  EM N  G     +V  YN+IID   
Sbjct: 245 ELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEM-NSRGLTV--NVQVYNTIIDARY 301

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G + KA E +  M +    P+++TYN+LI G C      EA  L  + +  G+ P+  
Sbjct: 302 KHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKF 361

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           ++  +I+  CK G  D+ +  L  M +RG  PD VTY +L+ G  + G +  A  +   M
Sbjct: 362 SYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKM 421

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           + +G   D   YNIL++  CK  K+  A  L  EML + + P    Y TL+ G  + GNL
Sbjct: 422 LERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNL 481

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A KL +      + P    +   I G CK G + +A+     ++         TY+ +
Sbjct: 482 DEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTV 541

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+G  K   L  A K+F                 M+   CK   MD    LLL       
Sbjct: 542 IDGYVKQHDLDGAQKMFRE---------------MVKMKCKPNVMDGLQGLLL------I 580

Query: 536 VPSEVTFCTL 545
           +PS   F  +
Sbjct: 581 IPSLFAFANM 590



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 178/372 (47%), Gaps = 19/372 (5%)

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKP-DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           L R R+  + LK F+ +    G    P +   Y+S++  L +     + + +L  M+   
Sbjct: 67  LDRIRDVELGLKFFDWVSR--GQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEE 124

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ-PDVVTFNAMINYNCKDGKMDKV 313
           ++P     + +I  +      ++A  L+  ++      PDV+  N+++N   K G+++  
Sbjct: 125 MSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIA 184

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
            +   +M++               G C  G++   R+L      +GC  ++  YN LI+ 
Sbjct: 185 RKFTCIMVK---------------GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDG 229

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            CK   +E A  L+ E+  +   P+V TY  +++G  + G+     +L+ +M    +  +
Sbjct: 230 YCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVN 289

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
              + T ID   K+G +++AV+  + +  C C+  I TYN LI+G C+ G++  A +L  
Sbjct: 290 VQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLE 349

Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           +   KG +P+  + + +IH  CK+G  D+A++ L++M  +   P  VT+  L+ G V   
Sbjct: 350 QALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAG 409

Query: 554 KKSKVVVLLHKM 565
           +    + +  KM
Sbjct: 410 EVDVALTIREKM 421



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 137/290 (47%), Gaps = 11/290 (3%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            ++ R+K G+I   +AV   + MI+    P + ++  L++   ++ +      L ++   
Sbjct: 296 IIDARYKHGHIV--KAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALG 353

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            GL P+ F    LI+  CK G    A   L  +      P+ VT+  L++GL   G +  
Sbjct: 354 KGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDV 413

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  + +K+      P+   +N L++GLC+      A  L  EM+++      PD   Y +
Sbjct: 414 ALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQS---VLPDAFVYAT 470

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ++DG  ++G +D+A++L     ++ +NP ++ YN++I G+C     K+A      M    
Sbjct: 471 LVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRH 530

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
           + PD  T++ +I+   K   +D   ++   M++    P+      +MDG 
Sbjct: 531 LAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN------VMDGL 574


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 158/599 (26%), Positives = 249/599 (41%), Gaps = 116/599 (19%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+     M++   S  + ++T+L+  L K  +      + + +   G+ P ++  N +I
Sbjct: 178 EALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMI 237

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  CK G    A  +   + R+   P+  T+N LI GLC E +  EA  L     V    
Sbjct: 238 DGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFT 296

Query: 184 PNVVTFNTLINGLCRTRNTLVALKL-------------------------------FEEM 212
           P V+TF  +ING C+      AL++                                +E 
Sbjct: 297 PTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKET 356

Query: 213 VNE-FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           V+E F     P+VV Y SIIDG CK G V  A E+   M+     PN  TY+SLI G   
Sbjct: 357 VSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQ 416

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT-- 329
                +A  L  +M ++G+ P V+T+  +I   CK  + D   RL E+M Q G+ PD   
Sbjct: 417 DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 476

Query: 330 ------------------------------VTYNSLMDGFCLVGRISRARELFVSMVSKG 359
                                         VTY SL+DGF   G    A  L   MV++G
Sbjct: 477 YNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 536

Query: 360 CRHDVYSYNILINANCKDQKVEDAVC---------------------------------- 385
           C+ D Y+Y++L+ A CK +K+ +A+                                   
Sbjct: 537 CKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAK 596

Query: 386 -LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            ++ EM+S   +PS  TY   +S   ++G + +A  LI +M+ + V PD  T+  +I+G 
Sbjct: 597 SMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGC 656

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG----------------RLKTA 488
              G++  A    + + +  CE    TY  L+    KM                  L T 
Sbjct: 657 GHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTV 716

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
            +L  R+   G  P  VT S++I   CK  ++++A  L   M  K+  P+E  +  L++
Sbjct: 717 WQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIK 775



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 226/449 (50%), Gaps = 7/449 (1%)

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           +   +LI  LC+      A V+L  +++   + N  T+  LI GLC EGRI  A R+ ++
Sbjct: 161 YSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEE 220

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           + +    P+V T+N +I+G C++     AL + + ++   G  C PD  TYN +I GLC 
Sbjct: 221 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMERNG--CNPDDWTYNILIYGLCG 277

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
           +   D+A+ELL     R   P VIT+ ++I G+C  +   +A  +   M+ +  + D+  
Sbjct: 278 EK-PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQA 336

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  +IN   K  +  +    +  M   G+ P+ V Y S++DG+C VG++  A E+F  M 
Sbjct: 337 YGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLME 396

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +GCR + ++Y+ LI    +DQK+  A+ L  +M  + I P VITY TL+ G  +     
Sbjct: 397 HEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 456

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           +A +L + M+ N + PD   +      LCK+G   EA      +R      ++ TY  L+
Sbjct: 457 NAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL--VRKGVVLTKV-TYTSLV 513

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           +G  K G    A  L  ++ ++G   D  T S ++  LCK+ ++++A  +L  M      
Sbjct: 514 DGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVK 573

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            + V +  ++   ++  K      + ++M
Sbjct: 574 CNIVAYTIIISEMIKEGKHDHAKSMFNEM 602



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 227/501 (45%), Gaps = 42/501 (8%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+TIL+  L + +     + L   +  +G   +L    LLI  LCK G   GA  VL  +
Sbjct: 162 SYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEM 221

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P+  T+N +I+G C  GR+ +A  +   +    C+P+  T+N LI GLC  +  
Sbjct: 222 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPD 281

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD--------------------- 241
                L + +V  F     P V+T+ +II+G CK   +D                     
Sbjct: 282 EAEELLNDAIVRGF----TPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAY 337

Query: 242 --------------KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
                         +AKE + +M    + PNV+ Y S+I G+C V     A  +F  M  
Sbjct: 338 GVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEH 397

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G +P+  T++++I    +D K+ K   L+  M + G+ P  +TY +L+ G C       
Sbjct: 398 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 457

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A  LF  M   G   D  +YN+L +A CK  + E+A   Y  ++ + +  + +TY +L+ 
Sbjct: 458 AFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVD 514

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G  + GN   A  LI+KM       DS+T++  +  LCK   + EA+ +   +     + 
Sbjct: 515 GFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKC 574

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            I  Y  +I+ + K G+   A  +F+ +   G  P   T +  I   CK GQ+++A  L+
Sbjct: 575 NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLI 634

Query: 528 LDMEAKNCVPSEVTFCTLLRG 548
            +ME     P  VT+   + G
Sbjct: 635 GEMERDGVAPDVVTYNVFING 655



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 233/526 (44%), Gaps = 64/526 (12%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++ +L+ +L K  ++         + +NGL P++ +   +I+  CK+G    A  V  
Sbjct: 334 LQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFR 393

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            +      PN  T++ LI GL  + ++ +A  L  K+      P V+T+ TLI G C+  
Sbjct: 394 LMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 453

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               A +LFE M+ + G    PD   YN +   LCK G  ++A   L++   + +    +
Sbjct: 454 EFDNAFRLFE-MMEQNG--LTPDEQAYNVLTHALCKSGRAEEAYSFLVR---KGVVLTKV 507

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY SL+ GF    +   A  L  +M++ G + D  T++ ++   CK  K+++   +L+ M
Sbjct: 508 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM 567

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
              GV  + V Y  ++      G+   A+ +F  M+S G +    +Y + I++ CK  ++
Sbjct: 568 TLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQI 627

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF--- 437
           E+A  L  EM  + + P V+TYN  ++G   +G +  A   + +M      P+ +T+   
Sbjct: 628 EEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWIL 687

Query: 438 -----------ATYID--GLCKNGFVLEAV-QVFQAIRNCKCELRIETYNCLINGLCKMG 483
                      A Y+D  G+  N   L+ V Q+ + +          TY+ +I G CK  
Sbjct: 688 LKHFLKMSLVDAHYVDTSGMW-NWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKAT 746

Query: 484 RLKTACKLFHRLQHK-----------------------------------GPIPDVVTCS 508
           RL+ AC LF  ++ K                                   G  P + +  
Sbjct: 747 RLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYH 806

Query: 509 TMIHWLCKEGQMDKANDL---LLDMEAKNCVPSEVTFCTLLRGFVQ 551
            +I  LC EG  DKA  L   LL ME  N   +EV +  L  G ++
Sbjct: 807 YLIVGLCDEGDYDKAKSLFCDLLGMEDYN--HNEVAWKILNDGLLK 850



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 197/454 (43%), Gaps = 58/454 (12%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +PG+ ++T L+    K  ++D    LF+ +  NGL PD    N+L + LCK G    A+ 
Sbjct: 436 TPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYS 495

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            L   +R       VT+  L++G    G    AA L +K+    C  +  T++ L+  LC
Sbjct: 496 FL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALC 552

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           + +    AL + ++M    G  C  ++V Y  II  + K+G  D AK +  +M      P
Sbjct: 553 KQKKLNEALSILDQMTLS-GVKC--NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKP 609

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK----- 312
           +  TY   I  +C +   +EA+ L  EM  +GV PDVVT+N  IN     G MD+     
Sbjct: 610 SATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTL 669

Query: 313 ----------------------------------------------VNRLLELMIQRGVN 326
                                                         V +LLE M++ G+N
Sbjct: 670 KRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLN 729

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           P  VTY+S++ GFC   R+  A  LF  M  K    +   Y +LI   C  +    AV  
Sbjct: 730 PTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSF 789

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI-DKMQLNDVVPDSFTFATYIDGLC 445
             +M+    +P + +Y+ L+ GL   G+   A  L  D + + D   +   +    DGL 
Sbjct: 790 VTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLL 849

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           K G V    Q+  A+ N  C++  ETY+ + + +
Sbjct: 850 KAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNI 883



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 194/411 (47%), Gaps = 38/411 (9%)

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C+ +  +Y  +I GLC+   V +A  LL+ M     + N+ TY  LI G C       A+
Sbjct: 156 CRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGAR 215

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN------ 333
            +  EM   GV P V T+NAMI+  CK G+M     +  LM + G NPD  TYN      
Sbjct: 216 RVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGL 275

Query: 334 ----------------------------SLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
                                       ++++G+C   RI  A  +  SM+S  C+ D+ 
Sbjct: 276 CGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQ 335

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y +LIN   K  + ++A     EM +  + P+V+ Y +++ G  +VG +G AL++   M
Sbjct: 336 AYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLM 395

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +     P+++T+++ I GL ++  + +A+ +   ++       + TY  LI G CK    
Sbjct: 396 EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 455

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A +LF  ++  G  PD    + + H LCK G+ ++A   L+    K  V ++VT+ +L
Sbjct: 456 DNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLV---RKGVVLTKVTYTSL 512

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           + GF +        VL+ KM  E    +D    S ++  L K KK  E L+
Sbjct: 513 VDGFSKAGNTDFAAVLIEKMVNEG-CKADSYTYSVLLQALCKQKKLNEALS 562


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 164/556 (29%), Positives = 275/556 (49%), Gaps = 39/556 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+   D M+K+     +     L+    KN Q      L   +    L PD +    L
Sbjct: 189 GDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTL 248

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  C+ G++S AF V  ++LR    P  VT+N L+ GLC  G   +A RL+  +     
Sbjct: 249 VDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGV 308

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN V + TL++GL +  +   AL L+++++     I K  +  +N++I+GLCK G +D 
Sbjct: 309 TPNEVGYCTLLDGLFKMGDFSRALTLWDDILAR--GINKS-IYAFNTMINGLCKMGEMDG 365

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AKE   +M++    P+ ITY +L  G+C V + +EA  +  +M    + P +  +N++I 
Sbjct: 366 AKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIV 425

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                 K+ K+  LL  M  RG++P+ VTY +L+ G+C  GR+ +A   +  M+ KG   
Sbjct: 426 GLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAP 485

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREM------LSER---------IR----------- 396
           +V   + ++++  +  ++++A  L ++M      L  R         IR           
Sbjct: 486 NVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTL 545

Query: 397 ---------PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
                    P+ + YN  ++GL + G + DA +    +      PD+FT+ T I G    
Sbjct: 546 DESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAA 605

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G+V EA  +   + N      I TYN L+NGLCK G L  A +LF +L  KG IP+VVT 
Sbjct: 606 GYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTY 665

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + +I   CK G   +A DL   M  +   PS +T+ +L+ GF + +   + + LL++M A
Sbjct: 666 NILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKA 725

Query: 568 EKLVVSDLSLSSKVVD 583
              V   ++  SK+V+
Sbjct: 726 SN-VDQTIATFSKLVE 740



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 140/508 (27%), Positives = 242/508 (47%), Gaps = 2/508 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A++ FD M K    P + S   LL+ L K  +  + V ++ ++    + PD+F   +++N
Sbjct: 15  ALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVN 74

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G    A   +  + +  F  N V++N L++G  + G I  A  + K ++      
Sbjct: 75  AYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMR 134

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N VT   LI G C+      A K+  EM  E G +   D   Y ++IDG CK G +  A 
Sbjct: 135 NKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVV--DEYAYGALIDGYCKVGKMGDAI 192

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            +  +M    +  N+   NSLI G+C      E + L + M    ++PD  ++  +++  
Sbjct: 193 RVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGY 252

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C+DG   K   + + M+++G+ P  VTYN+L+ G C  G    A  L+  M+ +G   + 
Sbjct: 253 CRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNE 312

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
             Y  L++   K      A+ L+ ++L+  I  S+  +NT+++GL ++G +  A +   +
Sbjct: 313 VGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKR 372

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+     PD  T+ T  DG CK G V EA ++ + +   +    IE YN LI GL    +
Sbjct: 373 MEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKK 432

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +     L   +  +G  P+VVT   +I   C +G++DKA     +M  K   P+ +    
Sbjct: 433 ISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSK 492

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
           ++    +  +  +  +LL KM    LV+
Sbjct: 493 IVSSLYRLGRIDEANMLLQKMVDFDLVL 520



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 254/503 (50%), Gaps = 5/503 (0%)

Query: 86  ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           ++L + A+       + +F  +   G  P L   N L++ L K G +  A +V  ++ R 
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
              P+  T   ++N  C  G++  A    +++     + N V++N+L++G     +   A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNS 264
             + + M +E G +   + VT   +I G CK   V++A+++L +M K+  +  +   Y +
Sbjct: 121 KGVLKFM-SEKGVM--RNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGA 177

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI G+C V    +A  +  EM+  G++ ++   N++IN  CK+G++ +  RLL  M +  
Sbjct: 178 LIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLD 237

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           + PD+ +Y +L+DG+C  G  S+A  +   M+ KG    V +YN L+   C+    +DA+
Sbjct: 238 LKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDAL 297

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+  ML   + P+ + Y TLL GLF++G+   AL L D +    +    + F T I+GL
Sbjct: 298 RLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGL 357

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           CK G +  A + F+ +    C+    TY  L +G CK+G ++ A K+  +++ +   P +
Sbjct: 358 CKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSI 417

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
              +++I  L    ++ K  DLL +M+ +   P+ VT+  L+ G+    +  K      +
Sbjct: 418 EMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFE 477

Query: 565 MAAEKLVVSDLSLSSKVVDLLSK 587
           M   K    ++ + SK+V  L +
Sbjct: 478 MIG-KGFAPNVIICSKIVSSLYR 499



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 219/482 (45%), Gaps = 38/482 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  +  M++   +P    +  LL  L K   +   ++L+  + + G+   ++  N +I
Sbjct: 295 DALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMI 354

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N LCKMG   GA     R+      P+ +T+  L +G C  G + EA ++ +K+      
Sbjct: 355 NGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIF 414

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++  +N+LI GL  ++     + L  EM         P+VVTY ++I G C  G +DKA
Sbjct: 415 PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRG---LSPNVVTYGALIAGWCDQGRLDKA 471

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD---------------- 287
                +M  +   PNVI  + ++     +    EA  L  +M+D                
Sbjct: 472 FSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNA 531

Query: 288 ----------------NGVQ---PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
                           + ++   P+ V +N  +   CK GK++   R    +      PD
Sbjct: 532 DIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPD 591

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
             TY +L+ GF   G ++ A  L   MV+KG   ++ +YN L+N  CK   ++ A  L+ 
Sbjct: 592 NFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFD 651

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           ++  + + P+V+TYN L+ G  + G+  +AL L  KM    + P   T+++ I+G CK  
Sbjct: 652 KLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQS 711

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            V EA+++   ++    +  I T++ L+ G  + G +K   KL + +    P   + +  
Sbjct: 712 DVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMACPSAGITSHK 771

Query: 509 TM 510
            M
Sbjct: 772 QM 773


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 236/492 (47%), Gaps = 8/492 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG+  +  LL  L +      VV ++  +   G+ P+++  NLLI  LC+      A  +
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  + R    P+ V+   +++G+C  GR+ E AR F    V    P   ++N +++ LC 
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRV-EEARGFLAETV----PVQASYNAVVHALCG 181

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                    +  EMV       +P+VVTY +I+D  CK   +  A  +L +M      PN
Sbjct: 182 EFRMWEVFSVVNEMVQRG---LQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 238

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+T+ +L+ GF       +A  ++  M+D G  P  +++N +I   C  G +        
Sbjct: 239 VLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 298

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M +  + P+  TY++L+DGF   G +  A  ++  M S GC+ +V  Y  +I+  CK  
Sbjct: 299 SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 358

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
             + A  L  +ML +   P+ +T+NTL+  L   G +G AL +   M+ N   P+  T+ 
Sbjct: 359 MFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 418

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             + GL + G   +A  +   + N   EL + TYN +IN LC+M   K A  L  R+  +
Sbjct: 419 ELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ 478

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PD  T + +IH  CKEG++  A  LL  M A NC  + V +  L+       K S  
Sbjct: 479 GIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNA 538

Query: 559 VVLLHKMAAEKL 570
           +V L KM  E +
Sbjct: 539 MVYLLKMLYEGI 550



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 223/481 (46%), Gaps = 43/481 (8%)

Query: 66  VYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           V  +D M K    P + ++ +L+  L +N + D    +   ++  G  PD      +++ 
Sbjct: 89  VPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSG 148

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           +CK+G    A   L   +     P   ++N +++ LC E R+ E   +  ++      PN
Sbjct: 149 MCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPN 203

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           VVT+ T+++  C+ R   +A  +   MV+     C P+V+T+ +++ G  +DG V  A  
Sbjct: 204 VVTYTTIVDAFCKARELRMACAILARMVSMG---CTPNVLTFTALVKGFFEDGKVHDALS 260

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWK----------------------------- 276
           +   M D    P+ I+YN LI G CC+ D K                             
Sbjct: 261 MWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFS 320

Query: 277 ------EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                  A  ++ EM  +G +P+VV +  MI+  CK    D+   L++ M+     P+TV
Sbjct: 321 NAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTV 380

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           T+N+L+   C  GR+ RA  +F  M   GC  +  +YN L++   ++   +DA  +  EM
Sbjct: 381 TFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEM 440

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           L+     S++TYNT+++ L Q+     A+ L+ +M +  + PD+FTF   I   CK G V
Sbjct: 441 LNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKV 500

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             A  +   +    C   +  Y  LI+ LC  G+L  A     ++ ++G  P+  T + +
Sbjct: 501 SIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVL 560

Query: 511 I 511
           +
Sbjct: 561 V 561



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 189/389 (48%), Gaps = 3/389 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P + ++T ++    K ++     ++  R+ S G  P++     L+    + G 
Sbjct: 195 MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGK 254

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   ++   + P+T+++N LI GLC  G +  A   F  +   A  PN  T++T
Sbjct: 255 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYST 314

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++G     +   A+ ++ EM +     CKP+VV Y ++ID LCK    D+A+ L+ +M 
Sbjct: 315 LVDGFSNAGDLDGAMLIWNEMKSSG---CKPNVVVYTNMIDVLCKKMMFDQAESLIDKML 371

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             N  PN +T+N+LI   C       A  +F  M  NG  P+  T+N +++   ++G   
Sbjct: 372 MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 431

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               ++  M+  G     VTYN++++  C +     A  L   M+ +G + D +++N +I
Sbjct: 432 DAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAII 491

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +A CK+ KV  A CL  +M +     +V+ Y  L+S L   G L +A+  + KM    + 
Sbjct: 492 HAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGIC 551

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           P+  T+   +  +  N   +  + +F+ I
Sbjct: 552 PNEATWNVLVRAIFTNIGTIGPIHLFKYI 580



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 160/355 (45%), Gaps = 39/355 (10%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  +  M+    +P   S+ +L+  L         +  F  +  N L P+    + L
Sbjct: 256 HDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTL 315

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++     G   GA ++   +  S   PN V +  +I+ LC +    +A  L  K+ +  C
Sbjct: 316 VDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNC 375

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VTFNTLI  LC       AL +F  M       C P+  TYN ++ GL ++G    
Sbjct: 376 PPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG---CHPNDRTYNELLHGLFREGNHKD 432

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  ++++M +     +++TYN++I   C +   K A  L   MM  G+QPD  TFNA+I+
Sbjct: 433 AFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIH 492

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+                             CL+G+          M +  C  
Sbjct: 493 AYCKEGKVSIAA-------------------------CLLGQ----------MNAVNCPR 517

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF-QVGNLG 416
           +V +Y ILI+  C   K+ +A+    +ML E I P+  T+N L+  +F  +G +G
Sbjct: 518 NVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIG 572



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 123/270 (45%), Gaps = 6/270 (2%)

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH-DVYS 366
           G +D V   L+ M  RGV        + +  F   G   RA + F      GCR   V  
Sbjct: 12  GDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRV 71

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN L++A  ++  V   V +Y  M    + P+V TYN L+  L Q   +  A K++D+M 
Sbjct: 72  YNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMS 131

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                PD  +  T + G+CK G V EA          +      +YN +++ LC   R+ 
Sbjct: 132 RKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQ-----ASYNAVVHALCGEFRMW 186

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
               + + +  +G  P+VVT +T++   CK  ++  A  +L  M +  C P+ +TF  L+
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 246

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +GF ++ K    + + H M  E    S +S
Sbjct: 247 KGFFEDGKVHDALSMWHWMVDEGWAPSTIS 276



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L  R+   G+ PD F  N +I+  CK G  S A  +LG++       N V +  LI+ LC
Sbjct: 471 LLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELC 530

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
            +G++  A     K+      PN  T+N L+  +     T+  + LF+ +V + 
Sbjct: 531 NQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFKYIVEDL 584


>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
          Length = 348

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 115/295 (38%), Positives = 178/295 (60%), Gaps = 5/295 (1%)

Query: 53  DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
           +R  SG  +I  ++AV  F  MI+ +P P +  F+ L + +AK KQY+ V+SL K++   
Sbjct: 51  ERLSSGIADIKKDDAVDLFQSMIRSRPLPSIIDFSRLFSAVAKTKQYELVLSLCKQMELQ 110

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+   ++ L+++INC C+      AF VLG+IL+  + P+TVTF+ L+NGLC EGR+ EA
Sbjct: 111 GIAHSIYTLSIVINCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSEA 170

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
             +  ++      PN+VT NTL+NGLC       A  L + MV E G  C+PD  TY  I
Sbjct: 171 VVIVDRMVEMKVRPNLVTLNTLVNGLCLKDQVSEAEALVDRMV-EHG--CQPDQFTYGPI 227

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ++ +CK G    A +LL +M+D+ + P V+TYN +I   C   ++ EA  LF EM   G+
Sbjct: 228 LNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGI 287

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           + DV+T+N++I   C  G+ D   +LL  MI R + P+ VT+++L+D F   G++
Sbjct: 288 KADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALIDCFVKEGKL 342



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 144/274 (52%), Gaps = 3/274 (1%)

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           ++RS   P+ + F+ L + +    +      L K++ +     ++ T + +IN  CR R 
Sbjct: 72  MIRSRPLPSIIDFSRLFSAVAKTKQYELVLSLCKQMELQGIAHSIYTLSIVINCFCRRRK 131

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
              A  +  +++ + G   +PD VT++++++GLC +G V +A  ++ +M +  + PN++T
Sbjct: 132 LGFAFSVLGKIL-KLGY--EPDTVTFSTLVNGLCLEGRVSEAVVIVDRMVEMKVRPNLVT 188

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
            N+L+ G C  D   EA+ L   M+++G QPD  T+  ++N  CK G       LL  M 
Sbjct: 189 LNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYGPILNRICKSGNTVSALDLLRKME 248

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
            + V P  VTYN ++D  C  G    A  LF  M  +G + DV +YN LI   C   + +
Sbjct: 249 DKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFCNAGRWD 308

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           D   L R+M++  I P+V+T++ L+    + G L
Sbjct: 309 DGAQLLRDMITRNITPNVVTFSALIDCFVKEGKL 342



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 149/278 (53%)

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  LF  M+ +   P ++ F+ + +   K  + + V  L + M  +G+     T + ++
Sbjct: 64  DAVDLFQSMIRSRPLPSIIDFSRLFSAVAKTKQYELVLSLCKQMELQGIAHSIYTLSIVI 123

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           + FC   ++  A  +   ++  G   D  +++ L+N  C + +V +AV +   M+  ++R
Sbjct: 124 NCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSEAVVIVDRMVEMKVR 183

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P+++T NTL++GL     + +A  L+D+M  +   PD FT+   ++ +CK+G  + A+ +
Sbjct: 184 PNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYGPILNRICKSGNTVSALDL 243

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
            + + + K + ++ TYN +I+ LCK G    A  LF+ ++ +G   DV+T +++I   C 
Sbjct: 244 LRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFCN 303

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            G+ D    LL DM  +N  P+ VTF  L+  FV+  K
Sbjct: 304 AGRWDDGAQLLRDMITRNITPNVVTFSALIDCFVKEGK 341



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 136/280 (48%)

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D A +L   M      P++I ++ L         ++    L  +M   G+   + T + +
Sbjct: 63  DDAVDLFQSMIRSRPLPSIIDFSRLFSAVAKTKQYELVLSLCKQMELQGIAHSIYTLSIV 122

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           IN  C+  K+     +L  +++ G  PDTVT+++L++G CL GR+S A  +   MV    
Sbjct: 123 INCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSEAVVIVDRMVEMKV 182

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
           R ++ + N L+N  C   +V +A  L   M+    +P   TY  +L+ + + GN   AL 
Sbjct: 183 RPNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYGPILNRICKSGNTVSALD 242

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L+ KM+   V P   T+   ID LCKNG   EA+ +F  +     +  + TYN LI G C
Sbjct: 243 LLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFC 302

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
             GR     +L   +  +   P+VVT S +I    KEG++
Sbjct: 303 NAGRWDDGAQLLRDMITRNITPNVVTFSALIDCFVKEGKL 342



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 143/280 (51%), Gaps = 3/280 (1%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A  LF+ +      P+++ F+ L + + +T+   + L L ++M  E   I    + T +
Sbjct: 64  DAVDLFQSMIRSRPLPSIIDFSRLFSAVAKTKQYELVLSLCKQM--ELQGIAH-SIYTLS 120

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
            +I+  C+   +  A  +L ++      P+ +T+++L+ G C      EA  +   M++ 
Sbjct: 121 IVINCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSEAVVIVDRMVEM 180

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
            V+P++VT N ++N  C   ++ +   L++ M++ G  PD  TY  +++  C  G    A
Sbjct: 181 KVRPNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYGPILNRICKSGNTVSA 240

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            +L   M  K  +  V +YN++I++ CK+   ++A+ L+ EM  E I+  VITYN+L+ G
Sbjct: 241 LDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGG 300

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
               G   D  +L+  M   ++ P+  TF+  ID   K G
Sbjct: 301 FCNAGRWDDGAQLLRDMITRNITPNVVTFSALIDCFVKEG 340



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 2/130 (1%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    LN   KSGN  S  A+     M   K  P + ++ +++  L KN  YD  +S
Sbjct: 220 DQFTYGPILNRICKSGNTVS--ALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALS 277

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF  +   G+  D+   N LI   C  G       +L  ++    TPN VTF+ LI+   
Sbjct: 278 LFNEMEREGIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALIDCFV 337

Query: 163 AEGRIMEAAR 172
            EG+++   R
Sbjct: 338 KEGKLINEHR 347


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 236/492 (47%), Gaps = 8/492 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           PG+  +  LL  L +      VV ++  +   G+ P+++  NLLI  LC+      A  +
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  + R    P+ V+   +++G+C  GR+ E AR F    V    P   ++N +++ LC 
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRV-EEARGFLAETV----PVQASYNAVVHALCG 234

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                    +  EMV       +P+VVTY +I+D  CK   +  A  +L +M      PN
Sbjct: 235 EFRMWEVFSVVNEMVQRG---LQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 291

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+T+ +L+ GF       +A  ++  M+D G  P  +++N +I   C  G +        
Sbjct: 292 VLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 351

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M +  + P+  TY++L+DGF   G +  A  ++  M S GC+ +V  Y  +I+  CK  
Sbjct: 352 SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 411

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
             + A  L  +ML +   P+ +T+NTL+  L   G +G AL +   M+ N   P+  T+ 
Sbjct: 412 MFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 471

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             + GL + G   +A  +   + N   EL + TYN +IN LC+M   K A  L  R+  +
Sbjct: 472 ELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ 531

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G  PD  T + +IH  CKEG++  A  LL  M A NC  + V +  L+       K S  
Sbjct: 532 GIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNA 591

Query: 559 VVLLHKMAAEKL 570
           +V L KM  E +
Sbjct: 592 MVYLLKMLYEGI 603



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 223/481 (46%), Gaps = 43/481 (8%)

Query: 66  VYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           V  +D M K    P + ++ +L+  L +N + D    +   ++  G  PD      +++ 
Sbjct: 142 VPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSG 201

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           +CK+G    A   L   +     P   ++N +++ LC E R+ E   +  ++      PN
Sbjct: 202 MCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPN 256

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           VVT+ T+++  C+ R   +A  +   MV+     C P+V+T+ +++ G  +DG V  A  
Sbjct: 257 VVTYTTIVDAFCKARELRMACAILARMVSMG---CTPNVLTFTALVKGFFEDGKVHDALS 313

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWK----------------------------- 276
           +   M D    P+ I+YN LI G CC+ D K                             
Sbjct: 314 MWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFS 373

Query: 277 ------EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                  A  ++ EM  +G +P+VV +  MI+  CK    D+   L++ M+     P+TV
Sbjct: 374 NAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTV 433

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           T+N+L+   C  GR+ RA  +F  M   GC  +  +YN L++   ++   +DA  +  EM
Sbjct: 434 TFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEM 493

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           L+     S++TYNT+++ L Q+     A+ L+ +M +  + PD+FTF   I   CK G V
Sbjct: 494 LNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKV 553

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             A  +   +    C   +  Y  LI+ LC  G+L  A     ++ ++G  P+  T + +
Sbjct: 554 SIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVL 613

Query: 511 I 511
           +
Sbjct: 614 V 614



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 189/389 (48%), Gaps = 3/389 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P + ++T ++    K ++     ++  R+ S G  P++     L+    + G 
Sbjct: 248 MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGK 307

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   ++   + P+T+++N LI GLC  G +  A   F  +   A  PN  T++T
Sbjct: 308 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYST 367

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L++G     +   A+ ++ EM +     CKP+VV Y ++ID LCK    D+A+ L+ +M 
Sbjct: 368 LVDGFSNAGDLDGAMLIWNEMKSSG---CKPNVVVYTNMIDVLCKKMMFDQAESLIDKML 424

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
             N  PN +T+N+LI   C       A  +F  M  NG  P+  T+N +++   ++G   
Sbjct: 425 MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 484

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               ++  M+  G     VTYN++++  C +     A  L   M+ +G + D +++N +I
Sbjct: 485 DAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAII 544

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           +A CK+ KV  A CL  +M +     +V+ Y  L+S L   G L +A+  + KM    + 
Sbjct: 545 HAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGIC 604

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           P+  T+   +  +  N   +  + +F+ I
Sbjct: 605 PNEATWNVLVRAIFTNIGTIGPIHLFKYI 633



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 160/355 (45%), Gaps = 39/355 (10%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+  +  M+    +P   S+ +L+  L         +  F  +  N L P+    + L
Sbjct: 309 HDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTL 368

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++     G   GA ++   +  S   PN V +  +I+ LC +    +A  L  K+ +  C
Sbjct: 369 VDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNC 428

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN VTFNTLI  LC       AL +F  M       C P+  TYN ++ GL ++G    
Sbjct: 429 PPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG---CHPNDRTYNELLHGLFREGNHKD 485

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  ++++M +     +++TYN++I   C +   K A  L   MM  G+QPD  TFNA+I+
Sbjct: 486 AFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIH 545

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+GK+                             CL+G+          M +  C  
Sbjct: 546 AYCKEGKVSI-------------------------AACLLGQ----------MNAVNCPR 570

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF-QVGNLG 416
           +V +Y ILI+  C   K+ +A+    +ML E I P+  T+N L+  +F  +G +G
Sbjct: 571 NVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIG 625



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 123/270 (45%), Gaps = 6/270 (2%)

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH-DVYS 366
           G +D V   L+ M  RGV        + +  F   G   RA + F      GCR   V  
Sbjct: 65  GDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRV 124

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN L++A  ++  V   V +Y  M    + P+V TYN L+  L Q   +  A K++D+M 
Sbjct: 125 YNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMS 184

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                PD  +  T + G+CK G V EA          +      +YN +++ LC   R+ 
Sbjct: 185 RKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQ-----ASYNAVVHALCGEFRMW 239

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
               + + +  +G  P+VVT +T++   CK  ++  A  +L  M +  C P+ +TF  L+
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 299

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
           +GF ++ K    + + H M  E    S +S
Sbjct: 300 KGFFEDGKVHDALSMWHWMVDEGWAPSTIS 329



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L  R+   G+ PD F  N +I+  CK G  S A  +LG++       N V +  LI+ LC
Sbjct: 524 LLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELC 583

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
            +G++  A     K+      PN  T+N L+  +     T+  + LF+ +V + 
Sbjct: 584 NQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFKYIVEDL 637


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 222/434 (51%), Gaps = 3/434 (0%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
            L  L ++   +  V   +++  +G+   +     +++ LCK G    A  ++  ++   
Sbjct: 159 FLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKG 218

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F P+ +T+N L+NG      +     +   +     D NV T+  LI    R+     A 
Sbjct: 219 FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAE 278

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           KLF+EM+ +     +PDV  Y SII+  CK G + +A  L  +M +R + PN  TY +LI
Sbjct: 279 KLFDEMLKKG---IEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALI 335

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C   + K A+ +  +M   GV  + V FN +++  CK G +D+  RL  +M Q+G  
Sbjct: 336 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 395

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            D  T N +  GFC   R   A+ L ++M  +G   +V S++ILI+  CK+Q   +A  L
Sbjct: 396 IDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRL 455

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           ++ M  +   PSV+TYN  +    + G + +A KLI++MQ   ++PD++T+ + IDG   
Sbjct: 456 FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERA 515

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           +G V  A+++F  +        + TY  +I+GL K GR   A KL+  +  +G +PD   
Sbjct: 516 SGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGI 575

Query: 507 CSTMIHWLCKEGQM 520
            S++I  L K G +
Sbjct: 576 YSSLIASLHKVGPL 589



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 188/347 (54%), Gaps = 4/347 (1%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           +T++T+L+   +++ + +    LF  +   G+ PD+++   +IN  CK G    AFV+  
Sbjct: 258 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 317

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            +      PN  T+  LING C  G +  A  +   +     D N V FNTL++G C+  
Sbjct: 318 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 377

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               AL+L   M  +   I   D  T N I  G C+    ++AK LLL M++R + PNV+
Sbjct: 378 MIDEALRLQNIMQQKGFEI---DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 434

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           +++ LI  +C   ++ EA+ LF  M   G  P VVT+NA I   CK GKM++  +L+  M
Sbjct: 435 SFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEM 494

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            +RG+ PDT TY SL+DG    G + RA ELF  M   G   +V +Y ++I+   KD + 
Sbjct: 495 QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRA 554

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK-LIDKMQ 426
           ++A  LY EM  E I P    Y++L++ L +VG L   L+ ++D+++
Sbjct: 555 DEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRIE 601



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 215/444 (48%), Gaps = 17/444 (3%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           RSCF        FL+  L   G +       +++     +  V ++  +++GLC+    +
Sbjct: 154 RSCF-------EFLL-ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVV 205

Query: 204 VALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            A  L +E+V      CK   P V+TYN++++G  +   V    E+L  M+   ++ NV 
Sbjct: 206 RAKALMDELV------CKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVT 259

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY  LI  +      +EA+ LF EM+  G++PDV  + ++IN+NCK G M +   L + M
Sbjct: 260 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 319

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            +R + P+  TY +L++G C  G +  A  +   M SKG   +   +N L++  CK   +
Sbjct: 320 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMI 379

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A+ L   M  +       T N + SG  +     +A +L+  M+   V P+  +F+  
Sbjct: 380 DEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 439

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           ID  CK     EA ++F+ +        + TYN  I   CK G+++ A KL + +Q +G 
Sbjct: 440 IDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 499

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           +PD  T +++I      G +D+A +L  +M       + VT+  ++ G  ++ +  +   
Sbjct: 500 MPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFK 559

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDL 584
           L  +M  E +V  D   SS +  L
Sbjct: 560 LYDEMNKEGIVPDDGIYSSLIASL 583



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 209/445 (46%), Gaps = 34/445 (7%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S  +FL    +SGN+     V F   M+       + S+T ++  L K  +     +
Sbjct: 152 DERSCFEFLLALKRSGNMEL--CVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKA 209

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L   L   G  P +   N L+N   ++    G   +L  + ++    N  T+  LI    
Sbjct: 210 LMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYS 269

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------- 215
              +I EA +LF ++     +P+V  + ++IN  C+  N   A  LF+EM          
Sbjct: 270 RSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAY 329

Query: 216 -FGAI----CKP------------------DV--VTYNSIIDGLCKDGFVDKAKELLLQM 250
            +GA+    CK                   DV  V +N+++DG CK G +D+A  L   M
Sbjct: 330 TYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 389

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
           + +    +  T N +  GFC  +  +EAK L + M + GV P+VV+F+ +I+  CK+   
Sbjct: 390 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 449

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
            +  RL ++M ++G  P  VTYN+ ++ +C  G++  A +L   M  +G   D Y+Y  L
Sbjct: 450 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSL 509

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+       V+ A+ L+ EM    +  +V+TY  ++SGL + G   +A KL D+M    +
Sbjct: 510 IDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGI 569

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQ 455
           VPD   +++ I  L K G ++  ++
Sbjct: 570 VPDDGIYSSLIASLHKVGPLVSGLE 594



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 12/235 (5%)

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           E+F     KG   D  S    + A  +   +E  V   R+M+   I   V ++  ++ GL
Sbjct: 139 EVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGL 198

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            + G +  A  L+D++      P   T+ T ++G  +   V    ++   +     +  +
Sbjct: 199 CKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNV 258

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY  LI    +  +++ A KLF  +  KG  PDV   +++I+W CK G M +A  L  +
Sbjct: 259 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 318

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           M  +  VP+  T+  L+ G  +            +M A +++V+D  + SK VD+
Sbjct: 319 MTERRLVPNAYTYGALINGACKAG----------EMKAAEMMVND--MQSKGVDV 361


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 222/434 (51%), Gaps = 3/434 (0%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
            L  L ++   +  V   +++  +G+   +     +++ LCK G    A  ++  ++   
Sbjct: 163 FLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKG 222

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           F P+ +T+N L+NG      +     +   +     D NV T+  LI    R+     A 
Sbjct: 223 FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAE 282

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
           KLF+EM+ +     +PDV  Y SII+  CK G + +A  L  +M +R + PN  TY +LI
Sbjct: 283 KLFDEMLKKG---IEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALI 339

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
            G C   + K A+ +  +M   GV  + V FN +++  CK G +D+  RL  +M Q+G  
Sbjct: 340 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 399

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
            D  T N +  GFC   R   A+ L ++M  +G   +V S++ILI+  CK+Q   +A  L
Sbjct: 400 IDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRL 459

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           ++ M  +   PSV+TYN  +    + G + +A KLI++MQ   ++PD++T+ + IDG   
Sbjct: 460 FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERA 519

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
           +G V  A+++F  +        + TY  +I+GL K GR   A KL+  +  +G +PD   
Sbjct: 520 SGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGI 579

Query: 507 CSTMIHWLCKEGQM 520
            S++I  L K G +
Sbjct: 580 YSSLIASLHKVGPL 593



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 188/347 (54%), Gaps = 4/347 (1%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           +T++T+L+   +++ + +    LF  +   G+ PD+++   +IN  CK G    AFV+  
Sbjct: 262 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 321

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            +      PN  T+  LING C  G +  A  +   +     D N V FNTL++G C+  
Sbjct: 322 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 381

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
               AL+L   M  +   I   D  T N I  G C+    ++AK LLL M++R + PNV+
Sbjct: 382 MIDEALRLQNIMQQKGFEI---DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 438

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           +++ LI  +C   ++ EA+ LF  M   G  P VVT+NA I   CK GKM++  +L+  M
Sbjct: 439 SFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEM 498

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            +RG+ PDT TY SL+DG    G + RA ELF  M   G   +V +Y ++I+   KD + 
Sbjct: 499 QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRA 558

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK-LIDKMQ 426
           ++A  LY EM  E I P    Y++L++ L +VG L   L+ ++D+++
Sbjct: 559 DEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRIE 605



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 215/444 (48%), Gaps = 17/444 (3%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           RSCF        FL+  L   G +       +++     +  V ++  +++GLC+    +
Sbjct: 158 RSCF-------EFLL-ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVV 209

Query: 204 VALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
            A  L +E+V      CK   P V+TYN++++G  +   V    E+L  M+   ++ NV 
Sbjct: 210 RAKALMDELV------CKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVT 263

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           TY  LI  +      +EA+ LF EM+  G++PDV  + ++IN+NCK G M +   L + M
Sbjct: 264 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 323

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            +R + P+  TY +L++G C  G +  A  +   M SKG   +   +N L++  CK   +
Sbjct: 324 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMI 383

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           ++A+ L   M  +       T N + SG  +     +A +L+  M+   V P+  +F+  
Sbjct: 384 DEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 443

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           ID  CK     EA ++F+ +        + TYN  I   CK G+++ A KL + +Q +G 
Sbjct: 444 IDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 503

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
           +PD  T +++I      G +D+A +L  +M       + VT+  ++ G  ++ +  +   
Sbjct: 504 MPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFK 563

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDL 584
           L  +M  E +V  D   SS +  L
Sbjct: 564 LYDEMNKEGIVPDDGIYSSLIASL 587



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 209/445 (46%), Gaps = 34/445 (7%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S  +FL    +SGN+     V F   M+       + S+T ++  L K  +     +
Sbjct: 156 DERSCFEFLLALKRSGNMEL--CVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKA 213

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L   L   G  P +   N L+N   ++    G   +L  + ++    N  T+  LI    
Sbjct: 214 LMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYS 273

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------- 215
              +I EA +LF ++     +P+V  + ++IN  C+  N   A  LF+EM          
Sbjct: 274 RSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAY 333

Query: 216 -FGAI----CKP------------------DV--VTYNSIIDGLCKDGFVDKAKELLLQM 250
            +GA+    CK                   DV  V +N+++DG CK G +D+A  L   M
Sbjct: 334 TYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 393

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
           + +    +  T N +  GFC  +  +EAK L + M + GV P+VV+F+ +I+  CK+   
Sbjct: 394 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 453

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNIL 370
            +  RL ++M ++G  P  VTYN+ ++ +C  G++  A +L   M  +G   D Y+Y  L
Sbjct: 454 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSL 513

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           I+       V+ A+ L+ EM    +  +V+TY  ++SGL + G   +A KL D+M    +
Sbjct: 514 IDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGI 573

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQ 455
           VPD   +++ I  L K G ++  ++
Sbjct: 574 VPDDGIYSSLIASLHKVGPLVSGLE 598



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 12/235 (5%)

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           E+F     KG   D  S    + A  +   +E  V   R+M+   I   V ++  ++ GL
Sbjct: 143 EVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGL 202

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            + G +  A  L+D++      P   T+ T ++G  +   V    ++   +     +  +
Sbjct: 203 CKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNV 262

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY  LI    +  +++ A KLF  +  KG  PDV   +++I+W CK G M +A  L  +
Sbjct: 263 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 322

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           M  +  VP+  T+  L+ G  +            +M A +++V+D  + SK VD+
Sbjct: 323 MTERRLVPNAYTYGALINGACKAG----------EMKAAEMMVND--MQSKGVDV 365


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 248/487 (50%), Gaps = 1/487 (0%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
            + K+L   G +  +   N  ++ L K+      ++V   ++   +  N  TFN +++ L
Sbjct: 189 EVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHAL 248

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C + ++ EA  +F ++      PNVVTFN +++G C+  +  +ALKL  +M        K
Sbjct: 249 CKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIK 308

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+ VTYNS+IDG CK G +  A+EL  +M   +I PNV TY ++I G+      +EA  L
Sbjct: 309 PNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRL 368

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
             EM++ G+ P+ V +N+++++   +G +D  + +   M  + +  D  T + L  G C 
Sbjct: 369 CDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCR 428

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G I+ A +    ++      D +S+NILIN  CK      A  L   M    + P V+T
Sbjct: 429 NGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVT 488

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           + TL+ G  + GN+  A+++ DKM   +  P+   + + I+GLCK+G V  A  +   ++
Sbjct: 489 FGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQ 548

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                  I TYN LING    G+   A KL   +Q+ G +    T +T+I +LCK G + 
Sbjct: 549 RMGLVDTI-TYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQ 607

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A +L+  M     +P  +T+ TL+    +N    +V+ L   M  + +V   L+  + V
Sbjct: 608 EAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIV 667

Query: 582 VDLLSKD 588
             LL ++
Sbjct: 668 SPLLQEE 674



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 243/473 (51%), Gaps = 9/473 (1%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L+ L K  +      ++K + S G   ++   N++++ LCK      A  V  RIL+S  
Sbjct: 210 LSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGI 269

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC---DPNVVTFNTLINGLCRTRNTLV 204
            PN VTFN +++G C  G +  A +L +K+ + +     PN VT+N+LI+G C+     V
Sbjct: 270 WPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITV 329

Query: 205 ALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           A    EE+ NE   I  +P+V TY ++I+G  + G +++A  L  +M +R + PN + YN
Sbjct: 330 A----EELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYN 385

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S++       D   A  +F +M D  +  D  T + +    C++G +    + L  +++ 
Sbjct: 386 SIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLEN 445

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            +  D  ++N L++  C     + AR+L   M  +G   DV ++  LI+ +CK+  +E A
Sbjct: 446 NLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESA 505

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           V +Y +M+    +P+++ YN++++GL + G +  A  L+D +Q   +V D+ T+ T I+G
Sbjct: 506 VQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLV-DTITYNTLING 564

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
               G   +A ++   ++N        TYN +I  LCK G ++ A +L   +   G +PD
Sbjct: 565 YFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPD 624

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
            +T  T++  + K    ++  +L   M  K  VP ++T+  ++   +Q    +
Sbjct: 625 NITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPLLQEESAT 677



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 248/517 (47%), Gaps = 61/517 (11%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNS-NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
           ++ +L  +++YD  +SL   L + NGL P L VL  L N     GI      V   ++R+
Sbjct: 122 VIHVLVNSRRYDDALSLMGNLMTVNGLSP-LEVLEALNN---SYGICESNHAVFDALVRA 177

Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
           C                  G  + A  + KKL +  C   +  +N  ++ L +       
Sbjct: 178 CTQI---------------GATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRF 222

Query: 206 LKLFEEM--------VNEFG----AICK--------------------PDVVTYNSIIDG 233
             +++EM        VN F     A+CK                    P+VVT+N ++DG
Sbjct: 223 WIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDG 282

Query: 234 LCKDGFVDKAKELLLQMK---DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
            CK G +D A +L+ +M+     +I PN +TYNSLI GFC +     A+ L  EMM   +
Sbjct: 283 ACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDI 342

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
           +P+V T+  MI    + G +++  RL + M++RG+ P++V YNS+M    + G +  A  
Sbjct: 343 EPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASL 402

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +F  M  K    D ++ +IL    C++  +  A+    ++L   +     ++N L++ L 
Sbjct: 403 VFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLC 462

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           +  N   A +L+ +M +  +VPD  TF T IDG CK G +  AVQV+  +   + +  + 
Sbjct: 463 KSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLL 522

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
            YN +INGLCK G +  A  L   LQ  G + D +T +T+I+     G+ DKA  L   M
Sbjct: 523 VYNSIINGLCKDGLVDVARSLVDVLQRMGLV-DTITYNTLINGYFNCGKFDKAFKLSTLM 581

Query: 531 EAKNCVPSEVTFCTLLR-----GFVQNNKKSKVVVLL 562
           +    + S  T+ T+++     G VQ  K+   +++L
Sbjct: 582 QNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVL 618



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 219/449 (48%), Gaps = 7/449 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M+       + +F +++  L K+ +    +S+F R+  +G++P++   N++++  CKMG 
Sbjct: 229 MVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGD 288

Query: 132 TSGAFVVLGR---ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
              A  ++ +   +      PN+VT+N LI+G C  G I  A  L  ++     +PNV T
Sbjct: 289 MDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRT 348

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           + T+I G  R      AL+L +EMV E G +  P+ V YNSI+  L  +G VD A  +  
Sbjct: 349 YATMIEGYSRAGCLEEALRLCDEMV-ERGLL--PNSVVYNSIMHWLYMEGDVDGASLVFT 405

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
            M D+ I  +  T + L  G C       A     ++++N +  D  + N +IN+ CK  
Sbjct: 406 DMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSN 465

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
                 +LL  M  RG+ PD VT+ +L+DG C  G I  A +++  MV    + ++  YN
Sbjct: 466 NFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYN 525

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            +IN  CKD  V+ A  L  ++L        ITYNTL++G F  G    A KL   MQ  
Sbjct: 526 SIINGLCKDGLVDVARSLV-DVLQRMGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNA 584

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            ++  S T+ T I  LCK G V EA ++   +          TY  L+  + K    +  
Sbjct: 585 GILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEV 644

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
            +L   +  KG +PD +T   ++  L +E
Sbjct: 645 IELHDYMVLKGVVPDKLTYENIVSPLLQE 673



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 184/371 (49%), Gaps = 4/371 (1%)

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
           T N L  L++ E + N +G IC+ +   +++++    + G    A E++ +++       
Sbjct: 144 TVNGLSPLEVLEALNNSYG-ICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVT 202

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           +  +N+ +     V++      ++ EM+  G   +V TFN +++  CKD K+ +   +  
Sbjct: 203 IHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFY 262

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM--VSKGC-RHDVYSYNILINANC 375
            +++ G+ P+ VT+N ++DG C +G +  A +L   M  +S G  + +  +YN LI+  C
Sbjct: 263 RILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFC 322

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K   +  A  L  EM+   I P+V TY T++ G  + G L +AL+L D+M    ++P+S 
Sbjct: 323 KIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSV 382

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
            + + +  L   G V  A  VF  + + +  L   T + L  GLC+ G + TA K  +++
Sbjct: 383 VYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQV 442

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
                I D  + + +I++LCK      A  LL  M  +  VP  VTF TL+ G  +    
Sbjct: 443 LENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNI 502

Query: 556 SKVVVLLHKMA 566
              V +  KM 
Sbjct: 503 ESAVQVYDKMV 513



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 39/348 (11%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+   D M++    P    +  ++  L      D    +F  ++   +  D F  ++L 
Sbjct: 364 EALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILT 423

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC+ G  + A   L ++L +    +  + N LIN LC       A +L  ++ V    
Sbjct: 424 RGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLV 483

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+VVTF TLI+G C+  N   A++++++MV       KP+++ YNSII+GLCKDG VD A
Sbjct: 484 PDVVTFGTLIDGHCKEGNIESAVQVYDKMVK---GEEKPNLLVYNSIINGLCKDGLVDVA 540

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           + L+  ++   +  + ITYN+LI G+     + +A  L   M + G+     T+N +I +
Sbjct: 541 RSLVDVLQRMGL-VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKF 599

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G + +   L+ +M+  GV PD +TY +L+                           
Sbjct: 600 LCKFGCVQEAKELMTMMVLWGVLPDNITYRTLV--------------------------- 632

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
                I IN NC     E+ + L+  M+ + + P  +TY  ++S L Q
Sbjct: 633 -----ININKNC---SAEEVIELHDYMVLKGVVPDKLTYENIVSPLLQ 672


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 240/474 (50%), Gaps = 7/474 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P +     LL  LA+++ +  + SL  R+ +     +L     LIN  C  G    A 
Sbjct: 37  PLPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAK 92

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
             L  +L +   P++  +   + G C  G +  A R+F  + +  C     T+  L++GL
Sbjct: 93  QHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGL 152

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
                   A+ +F  M  +    C PD   Y +++ GLC+ G  ++A+ LL +       
Sbjct: 153 LGAGMVREAMAVFVGMRADS---CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE 209

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN++ YN+LI G+C   + + A  +F  M  N   P+V T+  +I+  CK GK+++   L
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M++ G+ P+ VTY +L+ G C  G +  A  L   M + G   + +++++LI+A CK
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
            +KVE+A      ++ + ++ + + Y +L+ GL + G +  A +L+ KM     VPD+ +
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +++ IDGLC+   + +A  + + +     +    TY  +I+ L +    +   K+F ++ 
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
             G  PD+VT +  +   C+EG+M+ A  +++ M  +   P+ VT+ TL+RG+ 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 228/487 (46%), Gaps = 11/487 (2%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA- 135
           P+  + ++T L+                  L   GL PD +     +   C+ G+ + A 
Sbjct: 68  PARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHAC 127

Query: 136 --FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
             FV++   LR C      T+  L++GL   G + EA  +F  +   +C P+   + T++
Sbjct: 128 RVFVLMP--LRGCLR-TAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMV 184

Query: 194 NGLCRT-RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           +GLC   R     + L E M N F    +P++V YN++IDG C  G ++ A ++   M  
Sbjct: 185 HGLCEAGRTEEAEVLLEEAMSNGF----EPNIVVYNALIDGYCNAGEMEHALKVFEGMDG 240

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
              +PNV TY  LI G C     + A  LF  M++ G++P+VVT+ A+I   C +G +  
Sbjct: 241 NRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQC 300

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             RLL LM   G+ P+  T++ L+D  C   ++  A+    S+V KG + +   Y  LI+
Sbjct: 301 AFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             CK  K++ A  L ++M+SE   P   +Y++L+ GL +   L  A  +++ M    +  
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
              T+   ID L +        ++F  +        I TY   +   C+ GR++ A  + 
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            ++  +G  P++VT +T+I      G + +A      M  K   P+E ++  LLR  V+ 
Sbjct: 481 VQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540

Query: 553 NKKSKVV 559
           +     V
Sbjct: 541 SSSDNSV 547



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 229/461 (49%), Gaps = 10/461 (2%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++T LL  L         +++F  + ++   PD  V   +++ LC+ G T  A V+L   
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           + + F PN V +N LI+G C  G +  A ++F+ ++   C PNV T+  LI+GLC++   
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A+ LF  MV    A  +P+VVTY ++I G C +G +  A  LL  M+   + PN  T+
Sbjct: 264 ERAMVLFSRMVE---AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTF 320

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + LI   C  +  +EA+     ++  GV+ + V + ++I+  CK GK+D  + L++ MI 
Sbjct: 321 SVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G  PD  +Y+SL+DG C   ++S+A  +   M+ KG +    +Y I+I+   ++   E 
Sbjct: 381 EGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEG 440

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
              ++ +M++  I P ++TY   +    + G + DA  +I +M    V P+  T+ T I 
Sbjct: 441 PKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIR 500

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF-----HRLQH 497
           G    G V +A   F+ +     +   ++Y  L+  + K      +  ++       LQ 
Sbjct: 501 GYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQE 560

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
                D +    +I+ L ++G + + + LL  M+     PS
Sbjct: 561 SN--YDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 599



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 196/399 (49%), Gaps = 6/399 (1%)

Query: 172 RLFKKLNVFAC---DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           R+F  +   A      N+ T+ TLIN  C   +   A +    +++   A   PD   Y 
Sbjct: 55  RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLH---AGLAPDSYAYT 111

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
           S + G C+ G +  A  + + M  R       TY +L+ G       +EA  +F+ M  +
Sbjct: 112 SFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRAD 171

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
              PD   +  M++  C+ G+ ++   LLE  +  G  P+ V YN+L+DG+C  G +  A
Sbjct: 172 SCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHA 231

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            ++F  M    C  +V +Y  LI+  CK  KVE A+ L+  M+   + P+V+TY  L+ G
Sbjct: 232 LKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQG 291

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
               G+L  A +L+  M+ N +VP+ +TF+  ID LCK   V EA     ++     ++ 
Sbjct: 292 QCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVN 351

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
              Y  LI+GLCK G++  A +L  ++  +G +PD  + S++I  LC++ ++ +A  +L 
Sbjct: 352 EVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLE 411

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           DM  K    S VT+  ++   V+         +  KM A
Sbjct: 412 DMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIA 450



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 193/373 (51%), Gaps = 6/373 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
             A+  F+ M   + SP + ++T L+  L K+ + +  + LF R+   GL P++     L
Sbjct: 229 EHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTAL 288

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C  G    AF +L  +  +   PN  TF+ LI+ LC   ++ EA      L     
Sbjct: 289 IQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGV 348

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V + +LI+GLC+T     A +L ++M++E G +  PD  +Y+S+IDGLC+   + +
Sbjct: 349 KVNEVVYTSLIDGLCKTGKIDAADELMQKMISE-GFV--PDAHSYSSLIDGLCRQKKLSQ 405

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +L  M ++ I  + +TY  +I         +  K +F +M+  G+ PD+VT+   + 
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C++G+M+    ++  M+ RGV P+ VTYN+L+ G+  +G +S+A   F  MV KG + 
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP 525

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS---VITYNTLLSGLFQVGNLGDAL 419
           +  SY +L+    K    +++V +++    + ++ S    I +  L+ GL Q G++ +  
Sbjct: 526 NEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFS 585

Query: 420 KLIDKMQLNDVVP 432
            L+  M+ +   P
Sbjct: 586 SLLSVMKEHGYQP 598



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 180/405 (44%), Gaps = 36/405 (8%)

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
           SNG  P++ V N LI+  C  G    A  V   +  +  +PN  T+  LI+GLC  G++ 
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE------------------ 210
            A  LF ++     +PNVVT+  LI G C   +   A +L                    
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324

Query: 211 ------EMVNE----FGAICKPDV----VTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
                 E V E     G++ K  V    V Y S+IDGLCK G +D A EL+ +M      
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+  +Y+SLI G C      +A  +  +MM+ G+Q   VT+  +I+   ++   +   ++
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
            + MI  G+NPD VTY   +  +C  GR+  A  + V MV +G   ++ +YN LI     
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG---NLGDALKLIDKMQLNDVVPD 433
              V  A   +  M+ +  +P+  +Y  LL  + +     N  D  K+ D   L +   D
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYD 564

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
              +   I GL + G V E   +   ++    +    T N +I G
Sbjct: 565 EIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS-NTINAMITG 608



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 174/373 (46%), Gaps = 5/373 (1%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P +   N+++  L +       + L  +M  RN+     TY +LI  +C   D   AK  
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              ++  G+ PD   + + +   C+ G +    R+  LM  RG      TY +L+ G   
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G +  A  +FV M +  C  D + Y  +++  C+  + E+A  L  E +S    P+++ 
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN L+ G    G +  ALK+ + M  N   P+  T+   I GLCK+G V  A+ +F  + 
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               E  + TY  LI G C  G L+ A +L H ++  G +P+  T S +I  LCK  +++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A   L  +  K    +EV + +L+ G  +  K      L+ KM +E  V    S SS +
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS-L 393

Query: 582 VDLLSKDKKYREC 594
           +D L + KK  + 
Sbjct: 394 IDGLCRQKKLSQA 406



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 174/368 (47%), Gaps = 21/368 (5%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +    A+  F  M++    P + ++T L+              L   + +NGL P+
Sbjct: 259 KSGKV--ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPN 316

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +  ++LI+ LCK      A + LG +++     N V +  LI+GLC  G+I  A  L +
Sbjct: 317 DWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           K+      P+  ++++LI+GLCR +    A  + E+M+ E G    P  VTY  IID L 
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM-EKGIQASP--VTYTIIIDELV 433

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           ++   +  K++  +M    INP+++TY   +  +C     ++A+ + ++M+D GV P++V
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM---------DGFCLVGRIS 346
           T+N +I      G + +     E+M+ +G  P+  +Y  L+         D    + +I+
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIA 553

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
             ++L      +   +D   + ILI    +   V +   L   M     +PS  T N ++
Sbjct: 554 DMKDL------QESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSN-TINAMI 606

Query: 407 SGLFQVGN 414
           +G   V N
Sbjct: 607 TGEITVTN 614


>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
 gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
          Length = 319

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 110/299 (36%), Positives = 183/299 (61%), Gaps = 6/299 (2%)

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           + PD VTFN +++  CK GK+ +   +++ MI++GV P+TVTY+SLM+G+ L  R+  AR
Sbjct: 6   IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR 65

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           ++F +M+++GC  DV SYNILIN  CK Q++++A  ++ EM    + P+  TYNTLL G 
Sbjct: 66  KVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF 125

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
           ++       ++L   M      PD  T++ ++ GL K G++ +A+++F+ ++N      +
Sbjct: 126 WK-----QKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDL 180

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
             YN LI+ +CK G+L+ A +LF +L  KG +PDV + +++I  LC+EG +D+A      
Sbjct: 181 VIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQ 240

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
           ME   C P   ++  ++RGF+QNN  S+   L  +M  ++   +D    +   DLLSKD
Sbjct: 241 MERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEM-FDRGFSADALTRTLAADLLSKD 298



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 167/299 (55%), Gaps = 5/299 (1%)

Query: 219 ICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
           I  PD VT+N ++D LCK G + +A+ ++  M ++ + PN +TY+SL+ G+   +   EA
Sbjct: 5   IIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEA 64

Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
           + +F  M+  G  PDV+++N +IN  CK  ++D+  ++ + M  RG+ P+T TYN+L+ G
Sbjct: 65  RKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGG 124

Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
           F       +  +LF  M ++GC  D+ +Y+I ++   K   ++ A+ L+REM +  + P 
Sbjct: 125 FW-----KQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPD 179

Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
           ++ YN L+  + + G L DA +L  K+ +  ++PD  ++ + I GLC+ G + EA + F+
Sbjct: 180 LVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFR 239

Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
            +    C     +YN ++ G  +      A +LF  +  +G   D +T +     L K+
Sbjct: 240 QMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKD 298



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 151/293 (51%), Gaps = 27/293 (9%)

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
           + PD    N+L++ LCK G  S A  ++  ++     PNTVT++ L+NG   + R+ EA 
Sbjct: 6   IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR 65

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV------------------ 213
           ++F  +    C P+V+++N LING C+ +    A ++F+EM                   
Sbjct: 66  KVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF 125

Query: 214 ---------NEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
                    +     C PD+VTY+  + GL K G++D+A EL  +M++  +NP+++ YN 
Sbjct: 126 WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNI 185

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI   C     ++A+ LF+++   G+ PDV ++ ++I+  C++G +D+  +    M + G
Sbjct: 186 LIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDG 245

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             PD  +YN ++ GF      SRA +LF  M  +G   D  +  +  +   KD
Sbjct: 246 CPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKD 298



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 144/303 (47%), Gaps = 37/303 (12%)

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE--------------------- 215
           +  F   P+ VTFN L++ LC+      A  + + M+ +                     
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60

Query: 216 -------FGAI----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
                  F A+    C PDV++YN +I+G CK   +D+AK++  +M  R + PN  TYN+
Sbjct: 61  VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+ GF     WK+   LF +M   G  PD+VT++  ++   K G +D+   L   M    
Sbjct: 121 LLGGF-----WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNY 175

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           +NPD V YN L+D  C  G++  ARELF+ +  KG   DV S+  +I+  C++  +++A 
Sbjct: 176 LNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAY 235

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
             +R+M  +   P   +YN ++ G  Q      A +L  +M       D+ T     D L
Sbjct: 236 KAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLL 295

Query: 445 CKN 447
            K+
Sbjct: 296 SKD 298



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 12/277 (4%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLT-MLAKNKQYDTVVSLFKRLNSNGLFP 114
           K G I+  EA      MI+    P   +++ L+   L +N+ ++    +F  + + G  P
Sbjct: 22  KKGKIS--EAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR-KVFNAMITRGCIP 78

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D+   N+LIN  CK      A  +   +      PNT T+N L+ G        +  +LF
Sbjct: 79  DVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWK-----QKIQLF 133

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
           K ++   C P++VT++  ++GL +      AL+LF EM N +     PD+V YN +ID +
Sbjct: 134 KDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNY---LNPDLVIYNILIDAM 190

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK G ++ A+EL L++  + + P+V ++ S+I G C      EA   F +M  +G  PD 
Sbjct: 191 CKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDC 250

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
            ++N ++    ++    +  +L + M  RG + D +T
Sbjct: 251 CSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALT 287



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 6/212 (2%)

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M S  I P  +T+N L+  L + G + +A  ++  M    V P++ T+++ ++G      
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           V EA +VF A+    C   + +YN LING CK  R+  A ++F  +  +G IP+  T +T
Sbjct: 61  VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           ++    K+        L  DM A+ C P  VT+   L G  +     + + L  +M    
Sbjct: 121 LLGGFWKQ-----KIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNY 175

Query: 570 LVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L   DL + + ++D + K  K  +    F  L
Sbjct: 176 L-NPDLVIYNILIDAMCKSGKLEDARELFLKL 206


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 231/480 (48%), Gaps = 7/480 (1%)

Query: 88  LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
           L  LA+++    + S   R+ +     +L     LIN  C  G    +   L  +LR+ F
Sbjct: 48  LMALARHRMLADMESFASRMPAR----NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGF 103

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P++  +   + G C  G +  A RLF  + +  C     T+  L++GLC       A+ 
Sbjct: 104 APDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMS 163

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +F  M  +    C PD   Y +++ GLC  G   +A+ LL         PNV+ YN+LI 
Sbjct: 164 VFAGMQADG---CAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G+C V D + A  +F  M  NG  P+V T+  +I+  CK  K+D+   L   M+  G+ P
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + VTY +L+ G C  G++  A  L  SM + G   + ++ ++LI+A CK ++V +A  L 
Sbjct: 281 NVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLL 340

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
             ++ + I+ + I Y +L+ GL + G    A +L+  +     VPD+ T+++ IDGLC+ 
Sbjct: 341 GSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQ 400

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             + EA+ V   +     +    TY  +I+ L +      + K+  ++   G  PDV T 
Sbjct: 401 KELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTY 460

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           +  +   C EG+M+ A  ++L M      P+ VT+  L+ G+      S+       M A
Sbjct: 461 TIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVA 520



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 259/549 (47%), Gaps = 47/549 (8%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++T LL  L         +S+F  + ++G  PD  V   +++ LC  G T  A  +L   
Sbjct: 144 TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDA 203

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           +   F PN V +N LI+G C  G +  A  +F++++V  C PNV T+  LI+G C++R  
Sbjct: 204 MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKL 263

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A+ LF  MV+   A   P+VVTY ++I G C DG +D A  LL  M++  + PN  T 
Sbjct: 264 DRAMMLFSRMVD---AGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTC 320

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + LI   C  +   EA+ L   ++  G++ + + + ++I+  CK G+    +RL++ ++ 
Sbjct: 321 SVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVS 380

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +G  PD  TY+SL+DG C    +S A  +   M+ KG +    +Y I+I+   ++   + 
Sbjct: 381 QGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADG 440

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           +  +  +M++  I+P V TY   +      G + DA  ++  M  + V P+  T+   I 
Sbjct: 441 SKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALIC 500

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK-------------------MG 483
           G    G   +A   F+ +    C+   E+Y  L+  L K                   M 
Sbjct: 501 GYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMK 560

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            L    +   +LQ    I D+  C   +  LC+  ++D+A  LL++M++ N  PSE  + 
Sbjct: 561 YLHGLLEEMVKLQLPSEI-DIYNC--FLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYT 617

Query: 544 TLLR------------GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV-------DL 584
           +++              FV +  KS  +    ++ + + ++S L     +        D+
Sbjct: 618 SIIACCCRLKMLTEALTFVDSMVKSGYI---PQLESYRHIISSLCEEGSIQTAKQVFGDM 674

Query: 585 LSKDKKYRE 593
           LSK+  Y E
Sbjct: 675 LSKEYNYEE 683



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 266/556 (47%), Gaps = 25/556 (4%)

Query: 24  CSFGRPPNPKTDLS---SHHFKDGTSIAKFLNDRHKSGNITSNE-AVYFFDCMIKMKPSP 79
           C  GR    +T LS   +  F+    +   L D +   N+   E AV  F+ M     SP
Sbjct: 188 CGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGY--CNVGDLELAVDVFERMDVNGCSP 245

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
            + ++T L++   K+++ D  + LF R+   GL P++     LI   C  G    A+ +L
Sbjct: 246 NVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLL 305

Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
             +  S   PN  T + LI+ LC   R+ EA  L   L       N + + +LI+GLC+ 
Sbjct: 306 QSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKA 365

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
                A +L + +V++ G +  PD  TY+S+IDGLC+   + +A  +L  M ++ + P+ 
Sbjct: 366 GRFAAADRLMQTLVSQ-GFV--PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSP 422

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TY  +I           +K +  +M+  G++PDV T+   +   C +G+M+    ++  
Sbjct: 423 VTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLH 482

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M+  GV P+ VTYN+L+ G+  +G  S+A   F  MV+ GC+ +  SY +L+    K + 
Sbjct: 483 MVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKES 542

Query: 380 V----EDAVCLYR------------EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
                 ++V +++            EM+  ++   +  YN  L+ L +V  L +A  L+ 
Sbjct: 543 SNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLI 602

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +MQ  ++ P    + + I   C+   + EA+    ++       ++E+Y  +I+ LC+ G
Sbjct: 603 EMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEG 662

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            ++TA ++F  +  K    + +    +I  L ++G + + + LL  ME KN  PS+  + 
Sbjct: 663 SIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYA 722

Query: 544 TLLRGFVQNNKKSKVV 559
            L       N   ++ 
Sbjct: 723 RLTGKITDANDIQEIA 738



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 172/368 (46%), Gaps = 5/368 (1%)

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N+ +  L +   +   +    +M  RN+     TY +LI  +C   D   +K     ++ 
Sbjct: 45  NAFLMALARHRMLADMESFASRMPARNLR----TYTTLINAYCLAGDLPASKRHLSSLLR 100

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G  PD   + + +   C+ G +    RL  LM  RG      TY +L+ G C  G +  
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVRE 160

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A  +F  M + GC  D + Y  +++  C   +  +A  L  + ++E   P+V+ YN L+ 
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G   VG+L  A+ + ++M +N   P+  T+   I G CK+  +  A+ +F  + +     
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + TY  LI G C  G+L  A +L   +++ G +P+  TCS +I  LCK  ++ +A  LL
Sbjct: 281 NVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLL 340

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
             +  K    +E+ + +L+ G  +  + +    L+  + ++   V D    S ++D L +
Sbjct: 341 GSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGF-VPDAHTYSSLIDGLCR 399

Query: 588 DKKYRECL 595
            K+  E +
Sbjct: 400 QKELSEAM 407



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 166/363 (45%), Gaps = 1/363 (0%)

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
           TY ++I+  C  G +  +K  L  +      P+   Y S + G+C       A  LF+ M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
              G      T+ A+++  C  G + +   +   M   G  PD   Y +++ G C  GR 
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
             A  L    +++G   +V  YN LI+  C    +E AV ++  M      P+V TY  L
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           +SG  +   L  A+ L  +M    +VP+  T+   I G C +G +  A ++ Q++ N   
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                T + LI+ LCK  R+  A  L   L  KG   + +  +++I  LCK G+   A+ 
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           L+  + ++  VP   T+ +L+ G  +  + S+ +++L  M  EK V       + ++D L
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDM-MEKGVQPSPVTYTIIIDEL 432

Query: 586 SKD 588
            ++
Sbjct: 433 VRE 435


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 152/562 (27%), Positives = 265/562 (47%), Gaps = 33/562 (5%)

Query: 60  ITSNEAVYFFDCMIKMKPS--PGMTS-FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           ++S+     FD +   + +  P  +S F  L+   +   +    V  F R++     P  
Sbjct: 113 LSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTA 172

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
           FV N ++  L   G+   A  +  R++ +   PN  T+N L++GLC +G   +A ++F +
Sbjct: 173 FVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDE 232

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +      PNV  +  L++ LC       A++L   M ++    C PD VTYN+ + GLCK
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKG---CLPDEVTYNAFLSGLCK 289

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G V++A + L+ ++D      +  Y+ LI G      + E    +  M++  + PDVV 
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           +  MI    + G+++     L++M ++G  PDT  YN+++   C  G + RA  L   M+
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
                 D  +  I+I   CK   V++A+ ++ EM      P+V+TYN L+ G ++ G L 
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 417 DALKLIDKMQLN-------------DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           +A  L  KM++              + V DS +    +  +C++G VL+A ++ ++I + 
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                + TYN LINGLCK   L  A +LF  LQ KG  PD +T  T+I  L +  + + A
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL--------------HKMAAEK 569
             L  ++      PS   + +++R   +  K S+ + L                 +A   
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAH 649

Query: 570 LVVSDLSLSSKVVDLLSKDKKY 591
             + D SL   V +L+  D++Y
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEY 671



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 229/495 (46%), Gaps = 52/495 (10%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           ++  F  L+    + GR  +A + F +++ F   P    +NT++  L  +   L+AL L+
Sbjct: 136 SSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALY 195

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
             MV    A C P+  TYN ++DGLCK G    A ++  +M DR I PNV  Y  L+   
Sbjct: 196 NRMV---AAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C      EA  L   M D G  PD VT+NA ++  CK G++++  + L ++   G     
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
             Y+ L+DG     R       + +M+ +    DV  Y I+I    +  ++EDA+     
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M  +   P    YNT+L  L   G+L  A  L  +M  N++V DS T    I GLCK G 
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ------------- 496
           V EA+Q+F  +    C+  + TYN LI+G  + GRL+ A  LFH+++             
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 497 -----------------------------------HKGPIPDVVTCSTMIHWLCKEGQMD 521
                                                G +PDVVT +T+I+ LCK   +D
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
            A  L  +++ K   P E+T+ TL+ G ++ ++++  ++L   +       S LS+ + +
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS-LSIYNSM 611

Query: 582 VDLLSKDKKYRECLN 596
           +  L + KK  + +N
Sbjct: 612 MRSLCRMKKLSQAIN 626



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 242/548 (44%), Gaps = 46/548 (8%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV  F  M + +  P    +  +L  L  +      ++L+ R+ + G  P+    N+L+
Sbjct: 155 DAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLM 214

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G+   A  +   +L     PN   +  L++ LC  G+I EA +L   +    C 
Sbjct: 215 DGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL 274

Query: 184 PNVVTFNTLINGLCRTR----------------------------NTLVALKLFEEMVNE 215
           P+ VT+N  ++GLC+                              + L   + F+E    
Sbjct: 275 PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGY 334

Query: 216 FGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           +  + +    PDVV Y  +I G  + G ++ A   L  MK +   P+   YN+++   C 
Sbjct: 335 YKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD 394

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
             D + A  L  EM+ N +  D  T   MI   CK G +D+  ++ + M + G +P  +T
Sbjct: 395 HGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMT 454

Query: 332 YNSLMDGFCLVGRISRARELFVSM-----------VSKGCRH--DVYSYNILINANCKDQ 378
           YN+L+DGF   GR+  AR LF  M           ++ G     D  S   L++  C+  
Sbjct: 455 YNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSG 514

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +V  A  L R ++   + P V+TYNTL++GL +  NL  A++L  ++QL  + PD  T+ 
Sbjct: 515 QVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYG 574

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF-HRLQH 497
           T IDGL +     +A+ +FQ I        +  YN ++  LC+M +L  A  L+   L  
Sbjct: 575 TLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK 634

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           K   P         H   ++G +D     L+ ++ +    S   +   L G  Q  +   
Sbjct: 635 KYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDD 694

Query: 558 VVVLLHKM 565
            + + H +
Sbjct: 695 ALRIFHTL 702



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 241/536 (44%), Gaps = 54/536 (10%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A+  FD M+     P +  +T+LL+ L    + D  V L   +   G  PD    N 
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
            ++ LCK+G  + AF  L  +    F      ++ LI+GL    R  E    +K +    
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+VV +  +I G         AL  F +++ + G +  PD   YN+++  LC  G ++
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALS-FLDVMKKKGFV--PDTFCYNTVLKVLCDHGDLE 399

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A  L  +M   N+  +  T   +ICG C      EA  +F EM ++G  P V+T+NA+I
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNP--------------DTVTYNSLMDGFCLVGRISR 347
           +   ++G++++   L   M + G NP              D+ +   L+   C  G++ +
Sbjct: 460 DGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLK 518

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A +L  S++  G   DV +YN LIN  CK + ++ AV L++E+  + I P  ITY TL+ 
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF---------- 457
           GL +     DA+ L   +  +   P    + + +  LC+   + +A+ ++          
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNF 638

Query: 458 ----QAIRNCKCELRIET----------------------YNCLINGLCKMGRLKTACKL 491
               + + N   E+   +                      Y   + GLC++ R   A ++
Sbjct: 639 PVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRI 698

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           FH LQ  G       C+ +I++LC +  ++ A D++L   +K+ + S+     LLR
Sbjct: 699 FHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLR 754



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 206/454 (45%), Gaps = 13/454 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E   ++  M++   SP +  +TI++   A+  + +  +S    +   G  PD F  N +
Sbjct: 329 DEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTV 388

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC  G    A  +   +L++    ++ T   +I GLC  G + EA ++F ++    C
Sbjct: 389 LKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGC 448

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFE--EMVNE--------FGAICKPDVVTYNSIID 232
           DP V+T+N LI+G  R      A  LF   EM N          GA    D  +   ++ 
Sbjct: 449 DPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVH 508

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
            +C+ G V KA +LL  + D  + P+V+TYN+LI G C   +   A  LF E+   G+ P
Sbjct: 509 DMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D +T+  +I+   +  + +    L + ++Q G +P    YNS+M   C + ++S+A  L+
Sbjct: 569 DEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628

Query: 353 VSMVSKGCRHDVYSYNILINAN--CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +  + K     V S  +L NA+   +D  ++D V    ++  E    S   Y   L GL 
Sbjct: 629 LDYLPKKYNFPVES-EVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLC 687

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           QV    DAL++   +Q   +       A  I+ LC +  +  AV +     +    L   
Sbjct: 688 QVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQP 747

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
             N L+  LC   R + A  L  R+   G   DV
Sbjct: 748 VGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDV 781



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 141/353 (39%), Gaps = 54/353 (15%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV---- 118
           +EA+  FD M +    P + ++  L+    +  + +    LF ++   G  P LF+    
Sbjct: 434 DEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSLFLRLTL 492

Query: 119 ----------LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
                     L  L++ +C+ G    A+ +L  I+ S   P+ VT+N LINGLC    + 
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
            A RLFK+L +    P+ +T+ TLI+GL R      A+ LF+ ++    +   P +  YN
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS---PSLSIYN 609

Query: 229 SIIDGLCK------------------------------------DGFVDKAKELLLQMKD 252
           S++  LC+                                    DG +D     L+++  
Sbjct: 610 SMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQ 669

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
                +   Y   + G C V    +A  +F  + + G+         +INY C D  ++ 
Sbjct: 670 EYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNA 729

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
              ++   + + +       N L+   C+  R   A+ L   M   G   DVY
Sbjct: 730 AVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDVY 782


>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 139/430 (32%), Positives = 222/430 (51%), Gaps = 9/430 (2%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
             +  NLL   LCK G+   A  +   +     +PN     FL++    +G++  A  L 
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
             L  F  +   +  N+L+N L +      A+KLF+E +  F + C  D  T+N +I GL
Sbjct: 162 --LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHL-RFQS-CN-DTKTFNILIRGL 216

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV-QPD 293
           C  G  +KA ELL  M      P+++TYN+LI GFC  ++  +A  +F ++    V  PD
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VVT+ +MI+  CK GKM + + LL+ M++ G+ P  VT+N L+DG+   G +  A E+  
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+S GC  DV ++  LI+  C+  +V     L+ EM +  + P+  TY+ L++ L    
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L  A +L+ ++   D++P  F +   IDG CK G V EA  + + +   KC+    T+ 
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA---NDLLLDM 530
            LI G C  GR+  A  +FH++   G  PD +T S+++  L K G   +A   N +    
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKG 516

Query: 531 EAKNCVPSEV 540
           ++ N VP E 
Sbjct: 517 QSNNVVPPET 526



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 202/398 (50%), Gaps = 6/398 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLA-KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           A   F+CM     SP       L++  A K K +     L +     G      V+N L+
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC---CMVVNSLL 178

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N L K+     A  +    LR     +T TFN LI GLC  G+  +A  L   ++ F C+
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++VT+NTLI G C++     A ++F+++ +  G++C PDVVTY S+I G CK G + +A
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKS--GSVCSPDVVTYTSMISGYCKAGKMREA 296

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL  M    I P  +T+N L+ G+    +   A+ +  +M+  G  PDVVTF ++I+ 
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G++ +  RL E M  RG+ P+  TY+ L++  C   R+ +AREL   + SK     
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            + YN +I+  CK  KV +A  +  EM  ++ +P  IT+  L+ G    G + +A+ +  
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           KM      PD  T ++ +  L K G   EA  + Q  R
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 205/421 (48%), Gaps = 26/421 (6%)

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           R  E +R   KLN+     +  T+N L   LC+     +A ++FE M        K D V
Sbjct: 88  RFWEFSRF--KLNI---RHSFWTYNLLTRSLCKAGLHDLAGQMFECM--------KSDGV 134

Query: 226 TYNSIIDGLCKDGFVDKAK-----ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           + N+ + G     F +K K      LLLQ  +  +    +  NSL+     +D  ++A  
Sbjct: 135 SPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMK 192

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF E +      D  TFN +I   C  GK +K   LL +M   G  PD VTYN+L+ GFC
Sbjct: 193 LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFC 252

Query: 341 LVGRISRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
               +++A E+F  + S   C  DV +Y  +I+  CK  K+ +A  L  +ML   I P+ 
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTN 312

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +T+N L+ G  + G +  A ++  KM      PD  TF + IDG C+ G V +  ++++ 
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +          TY+ LIN LC   RL  A +L  +L  K  IP     + +I   CK G+
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA-----EKLVVSD 574
           +++AN ++ +ME K C P ++TF  L+ G     +  + V + HKM A     +K+ VS 
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492

Query: 575 L 575
           L
Sbjct: 493 L 493



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  FD  ++ +      +F IL+  L    + +  + L   ++  G  PD+   N LI
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248

Query: 124 NCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
              CK    + A  +   +   S  +P+ VT+  +I+G C  G++ EA+ L   +     
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P  VTFN L++G  +    L A ++  +M++ FG  C PDVVT+ S+IDG C+ G V +
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-FG--CFPDVVTFTSLIDGYCRVGQVSQ 365

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              L  +M  R + PN  TY+ LI   C  +   +A+ L  ++    + P    +N +I+
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK GK+++ N ++E M ++   PD +T+  L+ G C+ GR+  A  +F  MV+ GC  
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485

Query: 363 DVYSYNILINANCKDQKVEDAVCL 386
           D  + + L++   K    ++A  L
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHL 509



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 7/242 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D M+++   P   +F +L+   AK  +  T   +  ++ S G FPD+     LI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +  C++G  S  F +   +      PN  T++ LIN LC E R+++A  L  +L      
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P    +N +I+G C+      A  + EEM  +    CKPD +T+  +I G C  G + +A
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK---KCKPDKITFTILIIGHCMKGRMFEA 471

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL----FIEMMDNGVQPDVVTFNA 299
             +  +M     +P+ IT +SL+         KEA  L         +N V P+  T NA
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPPETKTANA 531

Query: 300 MI 301
            +
Sbjct: 532 TL 533



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 2/199 (1%)

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           IR S  TYN L   L + G    A ++ + M+ + V P++      +    + G +  A 
Sbjct: 99  IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +   +++ + E      N L+N L K+ R++ A KLF          D  T + +I  L
Sbjct: 159 ALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C  G+ +KA +LL  M    C P  VT+ TL++GF ++N+ +K   +   + +  +   D
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276

Query: 575 LSLSSKVVDLLSKDKKYRE 593
           +   + ++    K  K RE
Sbjct: 277 VVTYTSMISGYCKAGKMRE 295


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 248/500 (49%), Gaps = 36/500 (7%)

Query: 59  NITSNEAVY-----FFDCMIK----MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           N+  NE +Y     F+D ++     M  SP   SF +++  L K +  D  + +F+ +  
Sbjct: 156 NVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPE 215

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
               PD +    L++ LCK      A ++L  +     +P+ V +N LI+GLC +G +  
Sbjct: 216 RKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTR 275

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
             +L   + +  C PN VT+NTLI+GLC       A+ L E MV+   + C P+ VTY +
Sbjct: 276 VTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS---SKCIPNDVTYGT 332

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+GL K      A  LL  M++R  + N   Y+ LI G       +EA  L+ +M + G
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
            +P++V ++ +++  C++GK ++   +L  MI  G  P+  TY+SLM GF   G    A 
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +++  M   GC  + + Y++LI+  C   +V++A+ ++ +ML+  I+P  + Y++++ GL
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512

Query: 410 FQVGNLGDALKLIDKMQLND---VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
             +G++  ALKL  +M   +     PD  T+   +DGLC    +  AV +  ++ +  C+
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCD 572

Query: 467 LRIETYNCLINGL------CKMG---------------RLKTACKLFHRLQHKGPIPDVV 505
             + T N  +N L      C  G               R+  AC +   +  K   P   
Sbjct: 573 PDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTS 632

Query: 506 TCSTMIHWLCKEGQMDKAND 525
           T + ++  +CK  +++ A D
Sbjct: 633 TWAMIVREICKPKKINAAID 652



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 254/510 (49%), Gaps = 28/510 (5%)

Query: 76  KPSPGMTSFTI-------LLTMLAKNKQYDTVVSLFKR--LNSNGLFPDLFVLNLLINCL 126
           K +P M SF +       ++   A +  +D+V  L  R  L +  +    F++  +    
Sbjct: 65  KSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIV--VFRAY 122

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTV-TFNFLINGLCAEGRIMEAARLFK-------KLN 178
            K  +   A  +  R++       +V +FN ++N +  EG        +         +N
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182

Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
           +    PN ++FN +I  LC+ R    A+++F  M       C PD  TY +++DGLCK+ 
Sbjct: 183 I---SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPER---KCLPDGYTYCTLMDGLCKEE 236

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            +D+A  LL +M+    +P+ + YN LI G C   D      L   M   G  P+ VT+N
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I+  C  GK+DK   LLE M+     P+ VTY +L++G     R + A  L  SM  +
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G   + + Y++LI+   K+ K E+A+ L+R+M  +  +P+++ Y+ L+ GL + G   +A
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
            +++++M  +  +P+++T+++ + G  K G   EAVQV++ +    C      Y+ LI+G
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM---EAKNC 535
           LC +GR+K A  ++ ++   G  PD V  S++I  LC  G MD A  L  +M   E    
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            P  VT+  LL G       S+ V LL+ M
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSM 566



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 253/536 (47%), Gaps = 26/536 (4%)

Query: 31  NP-KTDLSSHHFKDGTSIAKF-LNDRHKSGNITSNEAVYFFDCMIKMKPSPGMT------ 82
           NP +  +S   FK    +  F L D   S  I S      FD + K+     +       
Sbjct: 53  NPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIE 112

Query: 83  -SFTILLTMLAKNKQYDTVVSLFKRL-------NSNGLFPDLFVLNLLIN-CLCKMGITS 133
            SF ++     K    D  V LF R+        S   F    VLN++IN  L   G+  
Sbjct: 113 RSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNS--VLNVIINEGLYHRGLEF 170

Query: 134 GAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
             +VV    +    +PN ++FN +I  LC    +  A  +F+ +    C P+  T+ TL+
Sbjct: 171 YDYVVNSN-MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLM 229

Query: 194 NGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
           +GLC+      A+ L +EM +E    C P  V YN +IDGLCK G + +  +L+  M  +
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEG---CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
              PN +TYN+LI G C      +A  L   M+ +   P+ VT+  +IN   K  +    
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
            RLL  M +RG + +   Y+ L+ G    G+   A  L+  M  KGC+ ++  Y++L++ 
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C++ K  +A  +   M++    P+  TY++L+ G F+ G   +A+++  +M       +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
            F ++  IDGLC  G V EA+ V+  +     +     Y+ +I GLC +G +  A KL+H
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526

Query: 494 RL---QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            +   +     PDVVT + ++  LC +  + +A DLL  M  + C P  +T  T L
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 119/230 (51%), Gaps = 7/230 (3%)

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLID- 423
           S+ ++  A  K    + AV L+  M+ E R + SV ++N++L+ +   G     L+  D 
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 424 ----KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
                M +N + P+  +F   I  LCK  FV  A++VF+ +   KC     TY  L++GL
Sbjct: 174 VVNSNMNMN-ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGL 232

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK  R+  A  L   +Q +G  P  V  + +I  LCK+G + +   L+ +M  K CVP+E
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           VT+ TL+ G     K  K V LL +M + K + +D++  + +  L+ + +
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 247/498 (49%), Gaps = 36/498 (7%)

Query: 59  NITSNEAVY-----FFDCMIK----MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
           N+  NE +Y     F+D ++     M  SP   SF +++  L K    D  + +F+ +  
Sbjct: 156 NVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPE 215

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
               PD +    L++ LCK      A ++L  +     +P+ V +N LI+GLC +G +  
Sbjct: 216 KKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSR 275

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
             +L   + +  C PN VT+NTLI+GLC       A+ L E MV+   + C P+ VTY +
Sbjct: 276 VTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS---SKCIPNDVTYGT 332

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +I+GL K         LL+ M++R    N   Y+ LI G       +EA  L+ +M + G
Sbjct: 333 LINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKG 392

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
            +P++V ++A+I+  C++GK ++   +L  MI  G  P+  TY+SLM GF   G    A 
Sbjct: 393 CRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAI 452

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +++  M   GC  + + Y++LI+  C   +V++A+ ++ +ML+  I+P  + Y++++ GL
Sbjct: 453 QVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGL 512

Query: 410 FQVGNLGDALKLIDKMQLND---VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
             +G++  ALKL  +M   +     PD  T+   +DGLC    V  AV +   + +  C+
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCD 572

Query: 467 LRIETYNCLINGL------CKMG---------------RLKTACKLFHRLQHKGPIPDVV 505
             + T N  +N L      C+ G               R+  ACK+   +  K   P   
Sbjct: 573 PDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTS 632

Query: 506 TCSTMIHWLCKEGQMDKA 523
           T + ++  +CK  +++ A
Sbjct: 633 TWAMIVPEICKPKKINAA 650



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 206/385 (53%), Gaps = 6/385 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN ++FN +I  LC+      A+++F  M  +    C PD  TY +++DGLCK+  +D+A
Sbjct: 185 PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEK---KCLPDGYTYCTLMDGLCKEERIDEA 241

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL +M+    +P+ + YN LI G C   D      L   M   G  P+ VT+N +I+ 
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHG 301

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C  GK+DK   LLE M+     P+ VTY +L++G     R      L +SM  +G R +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLN 361

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            + Y++LI+   K+ K E+A+ L+++M  +  RP+++ Y+ ++ GL + G   +A ++++
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILN 421

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M  +  +P+ +T+++ + G  K G   EA+QV++ +    C      Y+ LI+GLC +G
Sbjct: 422 GMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVG 481

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM---EAKNCVPSEV 540
           R+K A  ++ ++   G  PD V  S+MI  LC  G MD A  L  +M   E     P  V
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
           T+  LL G       S+ V LL+ M
Sbjct: 542 TYNILLDGLCMQKDVSRAVDLLNCM 566



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 250/515 (48%), Gaps = 18/515 (3%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRL-------NSNGLFPDLFVLNLLIN-CLCKMGITSG 134
           SF ++     K    +  V LF R+        S   F    VLN++IN  L   G+   
Sbjct: 114 SFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNS--VLNVIINEGLYHRGLEFY 171

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
            +VV    +    +PN ++FN +I  LC  G +  A  +F+ +    C P+  T+ TL++
Sbjct: 172 DYVVNSN-MNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMD 230

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           GLC+      A+ L +EM +E    C P  V YN +IDGLCK G + +  +L+  M  + 
Sbjct: 231 GLCKEERIDEAVLLLDEMQSEG---CSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKG 287

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             PN +TYN+LI G C      +A  L   M+ +   P+ VT+  +IN   K  +     
Sbjct: 288 CFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGA 347

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           RLL  M +RG   +   Y+ L+ G    G+   A  L+  M  KGCR ++  Y+ +I+  
Sbjct: 348 RLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGL 407

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C++ K  +A  +   M+S    P+V TY++L+ G F+ G   +A+++  +M       + 
Sbjct: 408 CREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNE 467

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
           F ++  IDGLC  G V EA+ V+  +     +     Y+ +I GLC +G +  A KL+H 
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHE 527

Query: 495 L---QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
           +   +     PDVVT + ++  LC +  + +A DLL  M  + C P  +T  T L    +
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSE 587

Query: 552 NNKK-SKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
            +    +    L ++ A  L    +S + K+V+++
Sbjct: 588 KSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVM 622



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 124/243 (51%), Gaps = 11/243 (4%)

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLID- 423
           S+ ++  A  K    E AV L+  M+ E R + SV ++N++L+ +   G     L+  D 
Sbjct: 114 SFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 424 ----KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
                M +N + P+  +F   I  LCK GFV  A++VF+ +   KC     TY  L++GL
Sbjct: 174 VVNSNMNMN-ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGL 232

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           CK  R+  A  L   +Q +G  P  V  + +I  LCK+G + +   L+ +M  K C P+E
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNE 292

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFR 599
           VT+ TL+ G     K  K V LL +M + K + +D++  + +  L+    K R  ++  R
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV----KQRRAMDGAR 348

Query: 600 HLL 602
            L+
Sbjct: 349 LLI 351


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 216/410 (52%), Gaps = 4/410 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++ +L+  L K    D+   +F  + S+G+ PD  +L LL++   +MG    A   L  +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                  +   +N L+N L  +  + EA  LF++       P+V +FN LI GLCR    
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ-MKDRNINPNVIT 261
             A + F+ M N FG  C PD+V+YN++I+G C+   + K  +LL + M  + ++P+VIT
Sbjct: 231 DKAFEFFQNMGN-FG--CFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y S+I G+C + D K A  LF EM+ +G++P+  TFN +I+   K G M     + E M+
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             G  PD VT+ SL+DG+C  G +++  +L+  M  +    +VY+Y +LINA CK+ ++ 
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIR 407

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           +A    R + S  + P    YN ++ G  + G + +A  ++ +MQ     PD  TF   I
Sbjct: 408 EARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            G C  G ++EA+  F  +    C     T N LI+ L K G    A ++
Sbjct: 468 IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 213/408 (52%), Gaps = 4/408 (0%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           +LL+  LCK+G+   A +V   +      P++     L++     G++  A     +++ 
Sbjct: 113 DLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHC 172

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
           +    +   +N L+N L +      A+ LF E +  +     PDV ++N +I GLC+ G 
Sbjct: 173 YGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV---PDVYSFNILIRGLCRIGE 229

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE-MMDNGVQPDVVTFN 298
           +DKA E    M +    P++++YN+LI GFC V++  +   L  E M+  GV PDV+T+ 
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++I+  CK G M   + L + M+  G+ P+  T+N L+DGF  VG +  A  ++  M+  
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  DV ++  LI+  C++ +V   + L+ EM    + P+V TY  L++ L +   + +A
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 409

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
              +  ++ ++VVP  F +   IDG CK G V EA  +   ++  KC     T+  LI G
Sbjct: 410 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 469

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
            C  GR+  A   F+++     +PD +T +++I  L K G  ++A+ +
Sbjct: 470 NCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 202/398 (50%), Gaps = 2/398 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++ A   FDCM      P  +   +L++  A+  + D+  +    ++  G+    FV N 
Sbjct: 125 NDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNN 184

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N L K  +   A ++    L   F P+  +FN LI GLC  G I +A   F+ +  F 
Sbjct: 185 LLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFG 244

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P++V++NTLING CR         L +E +   G    PDV+TY SII G CK G + 
Sbjct: 245 CFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGV--SPDVITYTSIISGYCKLGDMK 302

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A EL  +M    I PN  T+N LI GF  V + + A  ++ +M+  G  PDVVTF ++I
Sbjct: 303 AASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLI 362

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C++G++++  +L E M  R ++P+  TY  L++  C   RI  AR     + S    
Sbjct: 363 DGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVV 422

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
              + YN +I+  CK  KV++A  +  EM  ++ RP  IT+  L+ G    G + +A+  
Sbjct: 423 PKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAIST 482

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
             KM   + VPD  T  + I  L K G   EA Q+ QA
Sbjct: 483 FYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQA 520



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 210/395 (53%), Gaps = 4/395 (1%)

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T++ L+  LC  G    A  +F  +      P+      L++   R    L + K F   
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARM-GKLDSAKNFLNE 169

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           V+ +G    P V  YN++++ L K   VD+A  L  +  +    P+V ++N LI G C +
Sbjct: 170 VHCYGIKVSPFV--YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRI 227

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL-ELMIQRGVNPDTVT 331
            +  +A   F  M + G  PD+V++N +IN  C+  ++ K + LL E M+ +GV+PD +T
Sbjct: 228 GEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y S++ G+C +G +  A ELF  MVS G + + +++N+LI+   K   +  A+ +Y +ML
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
                P V+T+ +L+ G  + G +   LKL ++M++ ++ P+ +T+A  I+ LCK   + 
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIR 407

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           EA    + +++ +   +   YN +I+G CK G++  A  +   +Q K   PD +T + +I
Sbjct: 408 EARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
              C +G+M +A      M   NCVP E+T  +L+
Sbjct: 468 IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLI 502



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 207/399 (51%), Gaps = 4/399 (1%)

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T++ L+  LC+      A  +F+ M ++ G +  PD      ++    + G +D AK  L
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSD-GIL--PDSSILELLVSSYARMGKLDSAKNFL 167

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            ++    I  +   YN+L+      +   EA  LF E ++    PDV +FN +I   C+ 
Sbjct: 168 NEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRI 227

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS-MVSKGCRHDVYS 366
           G++DK     + M   G  PD V+YN+L++GFC V  IS+  +L    M+ KG   DV +
Sbjct: 228 GEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y  +I+  CK   ++ A  L+ EM+S  I+P+  T+N L+ G  +VGN+  A+ + +KM 
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
           L   +PD  TF + IDG C+ G V + +++++ ++       + TY  LIN LCK  R++
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIR 407

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A      L+    +P     + +I   CK G++D+AN ++ +M+ K C P ++TF  L+
Sbjct: 408 EARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
            G     +  + +   +KM     V  +++++S +  LL
Sbjct: 468 IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLL 506


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 216/410 (52%), Gaps = 4/410 (0%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++ +L+  L K    D+   +F  + S+G+ PD  +L LL++   +MG    A   L  +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                  +   +N L+N L  +  + EA  LF++       P+V +FN LI GLCR    
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ-MKDRNINPNVIT 261
             A + F+ M N FG  C PD+V+YN++I+G C+   + K  +LL + M  + ++P+VIT
Sbjct: 231 DKAFEFFQNMGN-FG--CFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           Y S+I G+C + D K A  LF EM+ +G++P+  TFN +I+   K G M     + E M+
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
             G  PD VT+ SL+DG+C  G +++  +L+  M  +    +VY+Y +LINA CK+ ++ 
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIR 407

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           +A    R + S  + P    YN ++ G  + G + +A  ++ +MQ     PD  TF   I
Sbjct: 408 EARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
            G C  G ++EA+  F  +    C     T N LI+ L K G    A ++
Sbjct: 468 IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 213/408 (52%), Gaps = 4/408 (0%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           +LL+  LCK+G+   A +V   +      P++     L++     G++  A     +++ 
Sbjct: 113 DLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHC 172

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
           +    +   +N L+N L +      A+ LF E +  +     PDV ++N +I GLC+ G 
Sbjct: 173 YGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV---PDVYSFNILIRGLCRIGE 229

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE-MMDNGVQPDVVTFN 298
           +DKA E    M +    P++++YN+LI GFC V++  +   L  E M+  GV PDV+T+ 
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++I+  CK G M   + L + M+  G+ P+  T+N L+DGF  VG +  A  ++  M+  
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  DV ++  LI+  C++ +V   + L+ EM    + P+V TY  L++ L +   + +A
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 409

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
              +  ++ ++VVP  F +   IDG CK G V EA  +   ++  KC     T+  LI G
Sbjct: 410 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 469

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
            C  GR+  A   F+++     +PD +T +++I  L K G  ++A+ +
Sbjct: 470 NCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 202/398 (50%), Gaps = 2/398 (0%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++ A   FDCM      P  +   +L++  A+  + D+  +    ++  G+    FV N 
Sbjct: 125 NDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNN 184

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+N L K  +   A ++    L   F P+  +FN LI GLC  G I +A   F+ +  F 
Sbjct: 185 LLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFG 244

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C P++V++NTLING CR         L +E +   G    PDV+TY SII G CK G + 
Sbjct: 245 CFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGV--SPDVITYTSIISGYCKLGDMK 302

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A EL  +M    I PN  T+N LI GF  V + + A  ++ +M+  G  PDVVTF ++I
Sbjct: 303 AASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLI 362

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +  C++G++++  +L E M  R ++P+  TY  L++  C   RI  AR     + S    
Sbjct: 363 DGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVV 422

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
              + YN +I+  CK  KV++A  +  EM  ++ RP  IT+  L+ G    G + +A+  
Sbjct: 423 PKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAIST 482

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
             KM   + VPD  T  + I  L K G   EA Q+ QA
Sbjct: 483 FYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQA 520



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 210/395 (53%), Gaps = 4/395 (1%)

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T++ L+  LC  G    A  +F  +      P+      L++   R    L + K F   
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARM-GKLDSAKNFLNE 169

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           V+ +G    P V  YN++++ L K   VD+A  L  +  +    P+V ++N LI G C +
Sbjct: 170 VHCYGIKVSPFV--YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRI 227

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL-ELMIQRGVNPDTVT 331
            +  +A   F  M + G  PD+V++N +IN  C+  ++ K + LL E M+ +GV+PD +T
Sbjct: 228 GEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           Y S++ G+C +G +  A ELF  MVS G + + +++N+LI+   K   +  A+ +Y +ML
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
                P V+T+ +L+ G  + G +   LKL ++M++ ++ P+ +T+A  I+ LCK   + 
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIR 407

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
           EA    + +++ +   +   YN +I+G CK G++  A  +   +Q K   PD +T + +I
Sbjct: 408 EARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467

Query: 512 HWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
              C +G+M +A      M   NCVP E+T  +L+
Sbjct: 468 IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLI 502



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 207/399 (51%), Gaps = 4/399 (1%)

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           T++ L+  LC+      A  +F+ M ++ G +  PD      ++    + G +D AK  L
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSD-GIL--PDSSILELLVSSYARMGKLDSAKNFL 167

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            ++    I  +   YN+L+      +   EA  LF E ++    PDV +FN +I   C+ 
Sbjct: 168 NEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRI 227

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS-MVSKGCRHDVYS 366
           G++DK     + M   G  PD V+YN+L++GFC V  IS+  +L    M+ KG   DV +
Sbjct: 228 GEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y  +I+  CK   ++ A  L+ EM+S  I+P+  T+N L+ G  +VGN+  A+ + +KM 
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
           L   +PD  TF + IDG C+ G V + +++++ ++       + TY  LIN LCK  R++
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIR 407

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A      L+    +P     + +I   CK G++D+AN ++ +M+ K C P ++TF  L+
Sbjct: 408 EARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
            G     +  + +   +KM     V  +++++S +  LL
Sbjct: 468 IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLL 506


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 240/474 (50%), Gaps = 7/474 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P +     LL  LA+++ +  + SL  R+ +     +L     LIN  C  G    A 
Sbjct: 37  PLPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAK 92

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
             L  +L +   P++  +   + G C  G +  A R+F  + +  C     T+  L++GL
Sbjct: 93  QHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGL 152

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
                   A+ +F  M  +    C PD   Y +++ GLC+ G  ++A+ LL +       
Sbjct: 153 LGAGMVREAMAVFVGMRADS---CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE 209

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN++ YN+LI G+C   + + A  +F  M  N   P+V T+  +I+  CK GK+++   L
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M++ G+ P+ VTY +L+ G C  G +  A  L   M + G   + +++++LI+A CK
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
            +KVE+A      ++ + ++ + + Y +L+ GL + G +  A +L+ KM     VPD+ +
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +++ IDGLC+   + +A  + + +     +    TY  +I+ L +    +   K+F ++ 
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
             G  PD+VT +  +   C+EG+M+ A  +++ M  +   P+ VT+ TL+RG+ 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/576 (26%), Positives = 272/576 (47%), Gaps = 45/576 (7%)

Query: 5   SSHRSF----SLASKAGYR--------CNFWCSFGRPPNPKTDLSS--HH--FKDGTSIA 48
           + HR F    SLAS+   R         N +C  G  P  K  L+S  H     D  +  
Sbjct: 52  ARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYT 111

Query: 49  KFLNDRHKSGNITSNEAVYFFDCMIKMKPSPG----MTSFTILLTMLAKNKQYDTVVSLF 104
            F+    ++G +T    V+       + P  G      ++T LL  L         +++F
Sbjct: 112 SFVLGYCRAGMLTHACRVFV------LMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVF 165

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
             + ++   PD  V   +++ LC+ G T  A V+L   + + F PN V +N LI+G C  
Sbjct: 166 VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           G +  A ++F+ ++   C PNV T+  LI+GLC++     A+ LF  MV    A  +P+V
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVE---AGLEPNV 282

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           VTY ++I G C +G +  A  LL  M+   + PN  T++ LI   C  +  +EA+     
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           ++  GV+ + V + ++I+  CK GK+D  + L++ MI  G  PD  +Y+SL+DG C   +
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKK 402

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +S+A  +   M+ KG +    +Y I+I+   ++   E    ++ +M++  I P ++TY  
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTV 462

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            +    + G + DA  +I +M    V P+  T+ T I G    G V +A   F+ +    
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKG 522

Query: 465 CELRIETYNCLIN------------GLCKMGRLKTACKLFHRLQHKG-PI-PDVVTCSTM 510
            +   ++Y  L+              + K+  +K    L   +  +  P+  D+ +C   
Sbjct: 523 WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSC--F 580

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           I  LC+  ++++A    + M+  N  PSE  + +++
Sbjct: 581 IRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 243/488 (49%), Gaps = 15/488 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
             A+  F+ M   + SP + ++T L+  L K+ + +  + LF R+   GL P++     L
Sbjct: 229 EHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTAL 288

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C  G    AF +L  +  +   PN  TF+ LI+ LC   ++ EA      L     
Sbjct: 289 IQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGV 348

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V + +LI+GLC+T     A +L ++M++E G +  PD  +Y+S+IDGLC+   + +
Sbjct: 349 KVNEVVYTSLIDGLCKTGKIDAADELMQKMISE-GFV--PDAHSYSSLIDGLCRQKKLSQ 405

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +L  M ++ I  + +TY  +I         +  K +F +M+  G+ PD+VT+   + 
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C++G+M+    ++  M+ RGV P+ VTYN+L+ G+  +G +S+A   F  MV KG + 
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP 525

Query: 363 DVYSYNILINANCKDQKVEDAVCLYR-----------EMLSERIRP-SVITYNTLLSGLF 410
           +  SY +L+    K    +++V +++           E ++ER  P +   Y+  +  L 
Sbjct: 526 NEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLC 585

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           +V  L +A      MQ  ++ P    + + ID  C+   + +A+ +  ++        +E
Sbjct: 586 RVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLE 645

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           +Y  +I+ LC+ G  +TA ++F  L  K    D +    +I+ L ++G + + + LL  M
Sbjct: 646 SYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVM 705

Query: 531 EAKNCVPS 538
           +     PS
Sbjct: 706 KEHGYQPS 713



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 222/501 (44%), Gaps = 44/501 (8%)

Query: 109 SNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
           SNG  P++ V N LI+  C  G    A  V   +  +  +PN  T+  LI+GLC  G++ 
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE------------------ 210
            A  LF ++     +PNVVT+  LI G C   +   A +L                    
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324

Query: 211 ------EMVNE----FGAICKPDV----VTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
                 E V E     G++ K  V    V Y S+IDGLCK G +D A EL+ +M      
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           P+  +Y+SLI G C      +A  +  +MM+ G+Q   VT+  +I+   ++   +   ++
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
            + MI  G+NPD VTY   +  +C  GR+  A  + V MV +G   ++ +YN LI     
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLS------------GLFQVGNLGDALKLIDK 424
              V  A   +  M+ +  +P+  +Y  LL              ++++ ++ D   L++ 
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLED 564

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           +    +   +  ++ +I  LC+   + EA   F  ++N       + Y  +I+  C++  
Sbjct: 565 ITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKI 624

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           L  A  L   +   G +P + +   +I  LC+ G    A ++  D+  K     E+ +  
Sbjct: 625 LTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKI 684

Query: 545 LLRGFVQNNKKSKVVVLLHKM 565
           L+ G +Q    ++   LL  M
Sbjct: 685 LIYGLLQKGSVAEFSSLLSVM 705



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 174/373 (46%), Gaps = 5/373 (1%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P +   N+++  L +       + L  +M  RN+     TY +LI  +C   D   AK  
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              ++  G+ PD   + + +   C+ G +    R+  LM  RG      TY +L+ G   
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G +  A  +FV M +  C  D + Y  +++  C+  + E+A  L  E +S    P+++ 
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN L+ G    G +  ALK+ + M  N   P+  T+   I GLCK+G V  A+ +F  + 
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               E  + TY  LI G C  G L+ A +L H ++  G +P+  T S +I  LCK  +++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A   L  +  K    +EV + +L+ G  +  K      L+ KM +E  V    S SS +
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS-L 393

Query: 582 VDLLSKDKKYREC 594
           +D L + KK  + 
Sbjct: 394 IDGLCRQKKLSQA 406



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/456 (23%), Positives = 189/456 (41%), Gaps = 81/456 (17%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           KSG +    A+  F  M++    P + ++T L+              L   + +NGL P+
Sbjct: 259 KSGKV--ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPN 316

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            +  ++LI+ LCK      A + LG +++     N V +  LI+GLC  G+I  A  L +
Sbjct: 317 DWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFE-------------------EMVNEF 216
           K+      P+  ++++LI+GLCR +    A  + E                   E+V E 
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436

Query: 217 GAI-------------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           G+                PD+VTY   +   C++G ++ A+ +++QM DR + PN++TYN
Sbjct: 437 GSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYN 496

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD------------ 311
           +LI G+  +    +A   F  M+  G +P+  ++  ++    K    D            
Sbjct: 497 TLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK 556

Query: 312 -----------------------------KVNRLLEL------MIQRGVNPDTVTYNSLM 336
                                        +V+RL E       M    + P    Y S++
Sbjct: 557 DLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           D  C +  ++ A  L  SM   G    + SY I+I++ C+      A  ++ ++L +   
Sbjct: 617 DCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESN 676

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
              I +  L+ GL Q G++ +   L+  M+ +   P
Sbjct: 677 YDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQP 712


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 224/462 (48%), Gaps = 33/462 (7%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           LL   +       V  L       GL PD   L LL     + GI+  A V  G + R  
Sbjct: 109 LLPAASPGDPAPLVSELAAAYADEGLLPDACSLVLLA---LRRGISLPAPVCSGLMSRLP 165

Query: 147 FTPNTVTF--NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
            TP   TF    L  G+  E R+                     FN L+    R    + 
Sbjct: 166 STPEAYTFYLQLLDAGMAPETRL---------------------FNVLMRDFVRLGELVS 204

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A K+F+EM        +P VVT+N++I G+C+   +D    L  +M D  + P+V TY +
Sbjct: 205 ARKVFDEMRRS----VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGA 260

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           LI GFC     + A  +F EM D GV P+ V F  +I+ +CK+G ++    L + M  RG
Sbjct: 261 LIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRG 320

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
           V PD V YN+L++G C    +  A  +   M + G + D  +Y  LI+  CKD K++ A+
Sbjct: 321 VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAM 380

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            + ++M  + +    +TY  L+SGL + G   DA +++ +M    + PD+ T+   ID  
Sbjct: 381 DIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAF 440

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C+ G V    ++ + ++N   +  + TYN ++NGLCK+G++K A  L H + + G  PD 
Sbjct: 441 CRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDD 500

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           +T + ++   CK G++  + +L     +K  VP    + +L+
Sbjct: 501 ITYNILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYTSLI 539



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 190/362 (52%), Gaps = 9/362 (2%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            + D  + G + S   V  FD M +    P + +F  L++ + + +  D V  L+K ++ 
Sbjct: 192 LMRDFVRLGELVSARKV--FDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSD 248

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ PD++    LI   C+ G    A  +   +  +   PN V F  LI+  C EG +  
Sbjct: 249 VGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNA 308

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
              L++ + V    P++V +N L+NGLCR RN   A  + EEM N   A  KPD VTY +
Sbjct: 309 GMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKN---AGLKPDKVTYTT 365

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           +IDG CKDG +D A ++  +M ++ ++ + +TY +LI G        +A+ +  EMM+  
Sbjct: 366 LIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAA 425

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           ++PD  T+  +I+  C+ G +    +LL+ M  +G  P  VTYN +M+G C +G++  A 
Sbjct: 426 LEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNAD 485

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
            L  +M++ G   D  +YNIL++  CK  KV ++  L     S+ + P    Y +L+S L
Sbjct: 486 MLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELES---SKGMVPDFAVYTSLISEL 542

Query: 410 FQ 411
            +
Sbjct: 543 AK 544


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 251/532 (47%), Gaps = 39/532 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP +  FT  +    K  + +  + LF ++   G+ P++   N +I+ L   G    AF+
Sbjct: 249 SPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFM 308

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
              +++     P  +T++ L+ GL    RI +A  + K++      PNV+ +N LI+ L 
Sbjct: 309 FKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLI 368

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
              +   A+++ + MV++  ++      TYN++I G CK G  D A+ LL +M     N 
Sbjct: 369 EAGSLNKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKSGQADIAERLLKEMLSIGFNV 425

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N  ++ S+IC  C    +  A     EM+   + P       +I+  CK GK  K   L 
Sbjct: 426 NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELW 485

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
              + +G   DT T N+L+ G C  G++     +   ++ +G   D  SYN LI+  C +
Sbjct: 486 LKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGN 545

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           +K+++A     EM+ + ++P   TY+ L+ GL  +  + +A++     + N ++PD +T+
Sbjct: 546 KKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTY 605

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
           +  IDG CK     E  ++F  + +   +     YN LI   C+ GRL  A +L   ++H
Sbjct: 606 SVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKH 665

Query: 498 KGPIPDVVTCSTMI-----------------------------HWLC------KEGQMDK 522
           KG  P+  T +++I                             H+        K GQM K
Sbjct: 666 KGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 725

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
              LL +M +KN  P+++T+  ++ G+ ++   ++   LLH+M  EK +V D
Sbjct: 726 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEM-REKGIVPD 776



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 243/491 (49%), Gaps = 3/491 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA  F + M++    P + +++IL+  L K K+      + K +   G  P++ V N L
Sbjct: 304 DEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNL 363

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L + G  + A  +   ++    +  + T+N LI G C  G+   A RL K++     
Sbjct: 364 IDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGF 423

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           + N  +F ++I  LC       AL+   EM+        P      ++I GLCK G   K
Sbjct: 424 NVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRN---MSPGGGLLTTLISGLCKHGKHSK 480

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A EL L+  ++    +  T N+L+ G C     +E   +  E++  G   D V++N +I+
Sbjct: 481 AVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLIS 540

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C + K+D+    ++ M+++G+ PD  TY+ L+ G   + ++  A + +      G   
Sbjct: 541 GCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIP 600

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DVY+Y+++I+  CK ++ E+   L+ EM+S  ++P+ + YN L+    + G L  AL+L 
Sbjct: 601 DVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELR 660

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           + M+   + P+S T+ + I G+     V EA  + + +R    E  +  Y  LI+G  K+
Sbjct: 661 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKL 720

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G++     L   +  K   P+ +T + MI    ++G + +A+ LL +M  K  VP  +T+
Sbjct: 721 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITY 780

Query: 543 CTLLRGFVQNN 553
              + G+++  
Sbjct: 781 KEFIYGYLKQG 791



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 206/394 (52%), Gaps = 6/394 (1%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           SFT ++ +L  +  +D+ +     +    + P   +L  LI+ LCK G  S A  +  + 
Sbjct: 429 SFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKF 488

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L   F  +T T N L++GLC  G++ E  R+ K++       + V++NTLI+G C  +  
Sbjct: 489 LNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKL 548

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
             A    +EMV +     KPD  TY+ +I GL     V++A +     K   + P+V TY
Sbjct: 549 DEAFMFMDEMVKKG---LKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTY 605

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           + +I G C  +  +E + LF EMM N +QP+ V +N +I   C+ G++     L E M  
Sbjct: 606 SVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKH 665

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +G++P++ TY SL+ G  ++ R+  A+ L   M  +G   +V+ Y  LI+   K  ++  
Sbjct: 666 KGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 725

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
             CL REM S+ + P+ ITY  ++ G  + GN+ +A +L+ +M+   +VPDS T+  +I 
Sbjct: 726 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIY 785

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
           G  K G VL+A   F+          IE +N LI
Sbjct: 786 GYLKQGGVLQA---FKGSDEENYAAIIEGWNKLI 816



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 172/367 (46%), Gaps = 13/367 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ F   M+    SPG    T L++ L K+ ++   V L+ +  + G   D    N L
Sbjct: 444 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNAL 503

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LC+ G     F +   IL   F  + V++N LI+G C   ++ EA     ++     
Sbjct: 504 LHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGL 563

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK-----PDVVTYNSIIDGLCKD 237
            P+  T++ LI GL       + +   EE + +F   CK     PDV TY+ +IDG CK 
Sbjct: 564 KPDNYTYSILIRGL-------LNMNKVEEAI-QFWGDCKRNGMIPDVYTYSVMIDGCCKA 615

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
              ++ ++L  +M   N+ PN + YN LI  +C       A  L  +M   G+ P+  T+
Sbjct: 616 ERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATY 675

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
            ++I       ++++   LLE M   G+ P+   Y +L+DG+  +G++ +   L   M S
Sbjct: 676 TSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 735

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
           K    +  +Y ++I    +D  V +A  L  EM  + I P  ITY   + G  + G +  
Sbjct: 736 KNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQ 795

Query: 418 ALKLIDK 424
           A K  D+
Sbjct: 796 AFKGSDE 802



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 176/375 (46%), Gaps = 36/375 (9%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           + ++ + P+  T N L+       ++++  C    ++  GV PDV  F   IN  CK GK
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKC-CEAFHVVCKGVSPDVYLFTTAINAFCKGGK 267

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           +++   L   M + GV P+ VTYN+++DG  + GR   A      MV +G    + +Y+I
Sbjct: 268 VEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSI 327

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
           L+    K +++ DA C+ +EM  +   P+VI YN L+  L + G+L  A+++ D M    
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKG 387

Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC--------------- 474
           +   S T+ T I G CK+G    A ++ + + +    +   ++                 
Sbjct: 388 LSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSAL 447

Query: 475 --------------------LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
                               LI+GLCK G+   A +L+ +  +KG + D  T + ++H L
Sbjct: 448 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGL 507

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C+ G++++   +  ++  +  V   V++ TL+ G   N K  +  + + +M  + L   +
Sbjct: 508 CEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDN 567

Query: 575 LSLSSKVVDLLSKDK 589
            + S  +  LL+ +K
Sbjct: 568 YTYSILIRGLLNMNK 582



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 1/271 (0%)

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +GV+PD   + + ++ FC  G++  A ELF  M   G   +V +YN +I+      + ++
Sbjct: 246 KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDE 305

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A     +M+   + P++ITY+ L+ GL +   +GDA  ++ +M      P+   +   ID
Sbjct: 306 AFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLID 365

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
            L + G + +A+++   + +    L   TYN LI G CK G+   A +L   +   G   
Sbjct: 366 SLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNV 425

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           +  + +++I  LC     D A   + +M  +N  P      TL+ G  ++ K SK V L 
Sbjct: 426 NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELW 485

Query: 563 HKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
            K   +  +V D   S+ ++  L +  K  E
Sbjct: 486 LKFLNKGFLV-DTKTSNALLHGLCEAGKLEE 515


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 240/474 (50%), Gaps = 7/474 (1%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
           P P +     LL  LA+++ +  + SL  R+ +     +L     LIN  C  G    A 
Sbjct: 37  PLPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAK 92

Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
             L  +L +   P++  +   + G C  G +  A R+F  + +  C     T+  L++GL
Sbjct: 93  QHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGL 152

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
                   A+ +F  M  +    C PD   Y +++ GLC+ G  ++A+ LL +       
Sbjct: 153 LGAGMVREAMTVFVGMRADS---CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE 209

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN++ YN+LI G+C   + + A  +F  M  N   P+V T+  +I+  CK GK+++   L
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
              M++ G+ P+ VTY +L+ G C  G +  A  L   M + G   + +++++LI+A CK
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
            +KVE+A      ++ + ++ + + Y +L+ GL + G +  A +L+ KM     VPD+ +
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           +++ IDGLC+   + +A  + + +     +    TY  +I+ L +    +   K+F ++ 
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
             G  PD+VT +  +   C+EG+M+ A  +++ M  +   P+ VT+ TL+RG+ 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/576 (26%), Positives = 272/576 (47%), Gaps = 45/576 (7%)

Query: 5   SSHRSF----SLASKAGYR--------CNFWCSFGRPPNPKTDLSS--HH--FKDGTSIA 48
           + HR F    SLAS+   R         N +C  G  P  K  L+S  H     D  +  
Sbjct: 52  ARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYT 111

Query: 49  KFLNDRHKSGNITSNEAVYFFDCMIKMKPSPG----MTSFTILLTMLAKNKQYDTVVSLF 104
            F+    ++G +T    V+       + P  G      ++T LL  L         +++F
Sbjct: 112 SFVLGYCRAGMLTHACRVFV------LMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVF 165

Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
             + ++   PD  V   +++ LC+ G T  A V+L   + + F PN V +N LI+G C  
Sbjct: 166 VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDV 224
           G +  A ++F+ ++   C PNV T+  LI+GLC++     A+ LF  MV    A  +P+V
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVE---AGLEPNV 282

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           VTY ++I G C +G +  A  LL  M+   + PN  T++ LI   C  +  +EA+     
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           ++  GV+ + V + ++I+  CK GK+D  + L++ MI  G  PD  +Y+SL+DG C   +
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKK 402

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           +S+A  +   M+ KG +    +Y I+I+   ++   E    ++ +M++  I P ++TY  
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTV 462

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            +    + G + DA  +I +M    V P+  T+ T I G    G V +A   F+ +    
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKG 522

Query: 465 CELRIETYNCLIN------------GLCKMGRLKTACKLFHRLQHKG-PI-PDVVTCSTM 510
            +   ++Y  L+              + K+  +K    L   +  +  P+  D+ +C   
Sbjct: 523 WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSC--F 580

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           I  LC+  ++++A    + M+  N  PSE  + +++
Sbjct: 581 IRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 228/487 (46%), Gaps = 11/487 (2%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGA- 135
           P+  + ++T L+                  L   GL PD +     +   C+ G+ + A 
Sbjct: 68  PARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHAC 127

Query: 136 --FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLI 193
             FV++   LR C      T+  L++GL   G + EA  +F  +   +C P+   + T++
Sbjct: 128 RVFVLMP--LRGCLR-TAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMV 184

Query: 194 NGLCRT-RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           +GLC   R     + L E M N F    +P++V YN++IDG C  G ++ A ++   M  
Sbjct: 185 HGLCEAGRTEEAEVLLEEAMSNGF----EPNIVVYNALIDGYCNAGEMEHALKVFEGMDG 240

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
              +PNV TY  LI G C     + A  LF  M++ G++P+VVT+ A+I   C +G +  
Sbjct: 241 NRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQC 300

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             RLL LM   G+ P+  T++ L+D  C   ++  A+    S+V KG + +   Y  LI+
Sbjct: 301 AFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             CK  K++ A  L ++M+SE   P   +Y++L+ GL +   L  A  +++ M    +  
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
              T+   ID L +        ++F  +        I TY   +   C+ GR++ A  + 
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            ++  +G  P++VT +T+I      G + +A      M  K   P+E ++  LLR  V+ 
Sbjct: 481 VQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540

Query: 553 NKKSKVV 559
           +     V
Sbjct: 541 SSSDNSV 547



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 191/383 (49%), Gaps = 3/383 (0%)

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N+ T+ TLIN  C   +   A +    +++   A   PD   Y S + G C+ G +  A 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLH---AGLAPDSYAYTSFVLGYCRAGMLTHAC 127

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            + + M  R       TY +L+ G       +EA  +F+ M  +   PD   +  M++  
Sbjct: 128 RVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGL 187

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C+ G+ ++   LLE  +  G  P+ V YN+L+DG+C  G +  A ++F  M    C  +V
Sbjct: 188 CEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNV 247

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y  LI+  CK  KVE A+ L+  M+   + P+V+TY  L+ G    G+L  A +L+  
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL 307

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+ N +VP+ +TF+  ID LCK   V EA     ++     ++    Y  LI+GLCK G+
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +  A +L  ++  +G +PD  + S++I  LC++ ++ +A  +L DM  K    S VT+  
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427

Query: 545 LLRGFVQNNKKSKVVVLLHKMAA 567
           ++   V+         +  KM A
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIA 450



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 197/392 (50%), Gaps = 15/392 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
             A+  F+ M   + SP + ++T L+  L K+ + +  + LF R+   GL P++     L
Sbjct: 229 EHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTAL 288

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C  G    AF +L  +  +   PN  TF+ LI+ LC   ++ EA      L     
Sbjct: 289 IQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGV 348

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N V + +LI+GLC+T     A +L ++M++E G +  PD  +Y+S+IDGLC+   + +
Sbjct: 349 KVNEVVYTSLIDGLCKTGKIDAADELMQKMISE-GFV--PDAHSYSSLIDGLCRQKKLSQ 405

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  +L  M ++ I  + +TY  +I         +  K +F +M+  G+ PD+VT+   + 
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C++G+M+    ++  M+ RGV P+ VTYN+L+ G+  +G +S+A   F  MV KG + 
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP 525

Query: 363 DVYSYNILINANCKDQKVEDAVCLYR-----------EMLSERIRP-SVITYNTLLSGLF 410
           +  SY +L+    K    +++V +++           E ++ER  P +   Y+  +  L 
Sbjct: 526 NEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLC 585

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           +V  L +A      MQ  ++ P    + + ID
Sbjct: 586 RVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 174/372 (46%), Gaps = 5/372 (1%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P +   N+++  L +       + L  +M  RN+     TY +LI  +C   D   AK  
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
              ++  G+ PD   + + +   C+ G +    R+  LM  RG      TY +L+ G   
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G +  A  +FV M +  C  D + Y  +++  C+  + E+A  L  E +S    P+++ 
Sbjct: 155 AGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN L+ G    G +  ALK+ + M  N   P+  T+   I GLCK+G V  A+ +F  + 
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
               E  + TY  LI G C  G L+ A +L H ++  G +P+  T S +I  LCK  +++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
           +A   L  +  K    +EV + +L+ G  +  K      L+ KM +E  V    S SS +
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS-L 393

Query: 582 VDLLSKDKKYRE 593
           +D L + KK  +
Sbjct: 394 IDGLCRQKKLSQ 405


>gi|414865591|tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
          Length = 838

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 260/563 (46%), Gaps = 63/563 (11%)

Query: 23  WCSFGRPPNPKTDL---SSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSP 79
           +C+ GRP +    L   S   + D   +   +    K G +   +AV     M  +   P
Sbjct: 218 YCNAGRPEDASAVLQRMSKRAWVDEHVLTMLIVAYSKWGKV--EDAVELLGRMEALDMRP 275

Query: 80  GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
              + ++L+  LA+  + D  +++F ++ S G   DL + ++LI  LC       A  + 
Sbjct: 276 NEKTLSVLVHGLARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLF 335

Query: 140 GRILRSCFTPNT------------------------------------VTFNFLINGLCA 163
             + R   TP+                                     + +N +++GL  
Sbjct: 336 EDMKRDRITPDVRLLKKIIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILDGLIN 395

Query: 164 EGRIMEAARLFKKL---------------NVFA----CDPNVVTFNTLINGLCRTRNTLV 204
            G +  A +L   +               ++F       PN  +FN ++ GLC+ +   +
Sbjct: 396 HGEVEAAYQLLSSMVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDL 455

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL L ++MV   G  CK  ++ +N +I  LC  G +D+A E+  QMKD  + P+  TYNS
Sbjct: 456 ALALTKDMV---GLGCKGKLLMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNS 512

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+ G C   D   A  L  EM  N  +P +     M+   C  G++ +  + L+ M++ G
Sbjct: 513 LLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELG 572

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD VTY++ M+G C VG I  A  LF+ + SK    DV ++NILIN   K  K ++A 
Sbjct: 573 FLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQ 632

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            +  EMLS+ + PSV+TYN ++    + G++  A+  + KM   +  P   T+ + +DGL
Sbjct: 633 EIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPTVVTYTSLLDGL 692

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C  G   EA+ ++  +R   C      Y  L+NGLCK GR++TA   +  ++ KG   D+
Sbjct: 693 CNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEMKTKGFDLDI 752

Query: 505 VTCSTMIHWLCKEGQMDKANDLL 527
            +   + + L  +GQ  K  +LL
Sbjct: 753 FSLLNLTNLLIAQGQASKGCELL 775



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 151/595 (25%), Positives = 261/595 (43%), Gaps = 91/595 (15%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           + T LL       + +   ++ +R++    + D  VL +LI    K G    A  +LGR+
Sbjct: 210 TLTSLLQCYCNAGRPEDASAVLQRMSKRA-WVDEHVLTMLIVAYSKWGKVEDAVELLGRM 268

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 PN  T + L++GL  +GR+  A  +F K+  +    ++  ++ LI GLC     
Sbjct: 269 EALDMRPNEKTLSVLVHGLARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEM 328

Query: 203 LVALKLFEEM-------------------------------VNEFGAICKPD--VVTYNS 229
             A+KLFE+M                               +NE     KP   V+ YN 
Sbjct: 329 GKAVKLFEDMKRDRITPDVRLLKKIIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNV 388

Query: 230 IIDGLCKDGFVDKAKELLLQMK-------------------DRNINPNVITYNSLICGFC 270
           I+DGL   G V+ A +LL  M                      ++ PN  ++N ++CG C
Sbjct: 389 ILDGLINHGEVEAAYQLLSSMVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLC 448

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
            V     A  L  +M+  G +  ++ FN +I   C  GK+D+   +   M   G+ P   
Sbjct: 449 KVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEF 508

Query: 331 TYNSLMDG-----------------------------------FCLVGRISRARELFVSM 355
           TYNSL+ G                                    CL GRI+ A +    M
Sbjct: 509 TYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGM 568

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +  G   D+ +Y+  +N  CK   +E+A+ L+ ++ S+   P V+ +N L++G  + G  
Sbjct: 569 LELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGKF 628

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A +++++M    ++P   T+   ID  CK+G + +A+     + + +    + TY  L
Sbjct: 629 DEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPTVVTYTSL 688

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           ++GLC  GR   A  L+ +++ KG  P+ +  + +++ LCK G+M+ A +   +M+ K  
Sbjct: 689 LDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEMKTKGF 748

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
                +   L    +   + SK   LL K+  +K VV +  L  K+VDL++K  K
Sbjct: 749 DLDIFSLLNLTNLLIAQGQASKGCELL-KVVLQKDVVHNNHL--KMVDLVNKAAK 800



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/542 (22%), Positives = 227/542 (41%), Gaps = 91/542 (16%)

Query: 118 VLNLLINCLCKMGITSGAFVVL--GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
            L  L+  L   G+   A  V    +   SC  PN+ T+N L++ L   GR  +A    +
Sbjct: 137 ALGFLLRRLGAAGLPDTAARVFDAAKTTLSC-APNSYTYNCLLDALAKAGRAEDAEARLQ 195

Query: 176 KLNVFACDPNV--VTFNTLINGLCRTRNTLVALKLFEEM-----------------VNEF 216
           ++ V   D +V   T  +L+   C       A  + + M                  +++
Sbjct: 196 EMVVTCGDESVDRYTLTSLLQCYCNAGRPEDASAVLQRMSKRAWVDEHVLTMLIVAYSKW 255

Query: 217 GAI--------------CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
           G +               +P+  T + ++ GL + G VD A  +  +M     + ++  Y
Sbjct: 256 GKVEDAVELLGRMEALDMRPNEKTLSVLVHGLARQGRVDVAMNMFGKMASYGFSVDLAMY 315

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV--------- 313
           + LI G C  ++  +A  LF +M  + + PDV     +I   C+ G    V         
Sbjct: 316 SVLIEGLCHGNEMGKAVKLFEDMKRDRITPDVRLLKKIIEAFCRQGDFSTVGPFINENAV 375

Query: 314 -----------NRLLELMIQRG-----------------------------------VNP 327
                      N +L+ +I  G                                   V P
Sbjct: 376 HLKPGSAVLLYNVILDGLINHGEVEAAYQLLSSMVRGDQRVSDDDTVGVHIFVITEDVKP 435

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           ++ ++N ++ G C V ++  A  L   MV  GC+  +  +N LI   C   K+++A  ++
Sbjct: 436 NSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSGKLDEAYEIF 495

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            +M    ++PS  TYN+LL G+ +  +   A  L+ +M+ N   P        +  LC +
Sbjct: 496 NQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLCLS 555

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G + EA+Q    +        I TY+  +NG+CK+G ++ A  LF  +  K  +PDVV  
Sbjct: 556 GRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDVVAH 615

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + +I+   K G+ D+A +++ +M +K  +PS VT+  ++  + ++    K +  ++KM  
Sbjct: 616 NILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMID 675

Query: 568 EK 569
           E+
Sbjct: 676 EE 677



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 3/301 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F+ M  +   P   ++  LL  + + K       L + + +N   P +     +
Sbjct: 489 DEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDM 548

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LC  G  + A   L  +L   F P+ VT++  +NG+C  G I  A  LF  ++    
Sbjct: 549 VQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCY 608

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+VV  N LING  +      A ++ EEM+++ G +  P VVTYN +ID  CK G +DK
Sbjct: 609 LPDVVAHNILINGFRKAGKFDEAQEIMEEMLSK-GML--PSVVTYNLMIDIWCKSGSIDK 665

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A   + +M D    P V+TY SL+ G C      EA  L+ +M + G  P+ + + A++N
Sbjct: 666 AITCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVN 725

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G+M+      E M  +G + D  +  +L +     G+ S+  EL   ++ K   H
Sbjct: 726 GLCKCGRMETAVNYYEEMKTKGFDLDIFSLLNLTNLLIAQGQASKGCELLKVVLQKDVVH 785

Query: 363 D 363
           +
Sbjct: 786 N 786


>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
 gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
          Length = 363

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/351 (35%), Positives = 187/351 (53%), Gaps = 18/351 (5%)

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           + ++  +PN+VT+N+LI+G C T      L L EEM       C PD+ TYN++IDGLCK
Sbjct: 1   MTIWGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMT---ATGCLPDINTYNTLIDGLCK 57

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G V +   L  +MK +  NP+VITY+ LI GFC +D    A  LF +M+     PDVVT
Sbjct: 58  TGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVT 117

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           F  ++   C  G +D   RLLE ++    +PD  TY SL+DGFC V R+  A  +   M 
Sbjct: 118 FPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMA 177

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
              C+ +V  Y  LI+A C   K   A  L  EM+   ++P+ ITY +L+ G    G+L 
Sbjct: 178 KGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLE 237

Query: 417 DALKLIDKMQLND-VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
           +A K++++++ N+    D F +   +DGLC+ G +  A+++ +AI+      R + Y  L
Sbjct: 238 EAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVAL 297

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
           I G   + R             KG  P+      +I  L +EG+ +KAN L
Sbjct: 298 IRGEMTLSR-------------KGR-PNAKVYEAVIQELAREGRHEKANAL 334



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 163/307 (53%), Gaps = 4/307 (1%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+ P++   N LI+  C         +++  +  +   P+  T+N LI+GLC  GR+ E 
Sbjct: 5   GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
            RLF ++    C+P+V+T++ LI G C+     +A  LF++M+ +      PDVVT+ ++
Sbjct: 65  NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAAL---PDVVTFPTL 121

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ++G C  G VD A+ LL ++   + +P+V TY SL+ GFC V    EA  +   M     
Sbjct: 122 VEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGEC 181

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
           QP+VV + A+I+  C  GK     +LLE M+  GV P+ +TY SL+ GFC  G +  A +
Sbjct: 182 QPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHK 241

Query: 351 LFVSMV-SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           +   +  ++ C+ D+++Y ++++  C+  ++  A+ L   +      P    Y  L+ G 
Sbjct: 242 MLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGE 301

Query: 410 FQVGNLG 416
             +   G
Sbjct: 302 MTLSRKG 308



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 171/366 (46%), Gaps = 28/366 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P M ++  L+         D+ + L + + + G  PD+   N LI+ LCK G       
Sbjct: 7   EPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNR 66

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           + G +      P+ +T++ LI G C   RI  A  LF  +   A  P+VVTF TL+ G C
Sbjct: 67  LFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYC 126

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
                  A +L EE+V    + C PDV TY S++DG CK   + +A  +L +M      P
Sbjct: 127 NAGLVDDAERLLEEIV---ASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQP 183

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV+ Y +LI  FC       A  L  EM+ NGVQP+ +T+ ++I   C  G +++ +++L
Sbjct: 184 NVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKML 243

Query: 318 ELMIQRGVN--PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC--RHDVYSYNILINA 373
           E  ++R  N   D   Y  +MDG C  GR+S A EL  ++   G   RHD+Y        
Sbjct: 244 E-RLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIY-------- 294

Query: 374 NCKDQKVEDAVCLYR-EM-LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
                     V L R EM LS + RP+   Y  ++  L + G    A  L D++  N   
Sbjct: 295 ----------VALIRGEMTLSRKGRPNAKVYEAVIQELAREGRHEKANALSDELLGNKAS 344

Query: 432 PDSFTF 437
              F  
Sbjct: 345 KTRFVI 350



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 160/319 (50%), Gaps = 1/319 (0%)

Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
            I PN++TYNSLI GFC  +       L  EM   G  PD+ T+N +I+  CK G++ +V
Sbjct: 5   GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64

Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
           NRL   M  +  NPD +TY+ L+ GFC + RI+ A  LF  M+ +    DV ++  L+  
Sbjct: 65  NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEG 124

Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
            C    V+DA  L  E+++    P V TY +L+ G  +V  + +A +++ +M   +  P+
Sbjct: 125 YCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPN 184

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
              +   ID  C  G    A ++ + +     +    TY  LI G C  G L+ A K+  
Sbjct: 185 VVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLE 244

Query: 494 RLQ-HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           RL+ ++    D+     M+  LC+ G+M  A +LL  ++     P    +  L+RG +  
Sbjct: 245 RLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGEMTL 304

Query: 553 NKKSKVVVLLHKMAAEKLV 571
           ++K +    +++   ++L 
Sbjct: 305 SRKGRPNAKVYEAVIQELA 323



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 133/273 (48%)

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P+ VTYNSL+ GFC+   +     L   M + GC  D+ +YN LI+  CK  +V + 
Sbjct: 5   GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L+ EM ++   P VITY+ L+ G  ++  +  A  L D M     +PD  TF T ++G
Sbjct: 65  NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEG 124

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C  G V +A ++ + I    C   + TY  L++G CK+ R+  A ++  R+      P+
Sbjct: 125 YCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPN 184

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           VV  + +I   C  G+   A  LL +M      P+ +T+ +L+ GF       +   +L 
Sbjct: 185 VVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLE 244

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
           ++   +   +D+     ++D L +  +    L 
Sbjct: 245 RLERNENCKADMFAYRVMMDGLCRTGRMSAALE 277



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 18/255 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N A   FD M+K    P + +F  L+         D    L + + ++   PD++    L
Sbjct: 97  NMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSL 156

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK+     A  VL R+ +    PN V +  LI+  C+ G+   A +L +++     
Sbjct: 157 VDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGV 216

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +T+ +LI G C T +   A K+ E +  E    CK D+  Y  ++DGLC+ G +  
Sbjct: 217 QPNAITYRSLIGGFCGTGDLEEAHKMLERL--ERNENCKADMFAYRVMMDGLCRTGRMSA 274

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM-MDNGVQPDVVTFNAMI 301
           A ELL  +K     P    Y +LI G               EM +    +P+   + A+I
Sbjct: 275 ALELLEAIKQSGTPPRHDIYVALIRG---------------EMTLSRKGRPNAKVYEAVI 319

Query: 302 NYNCKDGKMDKVNRL 316
               ++G+ +K N L
Sbjct: 320 QELAREGRHEKANAL 334



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 1/169 (0%)

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M +  + P+  T+ + I G C    V   + + + +    C   I TYN LI+GLCK GR
Sbjct: 1   MTIWGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGR 60

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +    +LF  ++ K   PDV+T S +I   CK  +++ A  L  DM  +  +P  VTF T
Sbjct: 61  VPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPT 120

Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           L+ G+           LL ++ A      D+   + +VD   K K+  E
Sbjct: 121 LVEGYCNAGLVDDAERLLEEIVASD-CSPDVYTYTSLVDGFCKVKRMVE 168


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 224/450 (49%), Gaps = 27/450 (6%)

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
           I   C+ P+ + FN L++  C  G    A +L KK+ +    P  V +N LI G+C T +
Sbjct: 3   ITEGCY-PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 202 TL------VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
                   +A + + EM+     + K +V  +      LC  G  +KA  ++ +M  +  
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRC---LCCIGKFEKAYNVIREMMSKGF 118

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            P+  TY+ +I   C     ++A  LF EM  NG+ PDV T+  +++  CK G +++   
Sbjct: 119 IPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARN 178

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
             + M Q G  P+ VTY +L+  +    ++SRA E+F  M+S GC  ++ +Y  LI+ +C
Sbjct: 179 WFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHC 238

Query: 376 KDQKVEDAVCLYREMLSERI-----------------RPSVITYNTLLSGLFQVGNLGDA 418
           K  + E A  +Y  M ++++                  P+V+TY  L+ GL +   + +A
Sbjct: 239 KAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEA 298

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L++ M L    P+   +   IDG CK G + EA +VF  +    C   + TY+ LI+ 
Sbjct: 299 RDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDK 358

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
           L K  RL  A K+  ++      P+VV  + M+  LCK G+ D+A  L+L ME K C P+
Sbjct: 359 LFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPN 418

Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            VT+  ++ GF +  +  + + LL  M ++
Sbjct: 419 VVTYTAMIDGFGKAGRVDRCLELLQLMTSK 448



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 226/478 (47%), Gaps = 28/478 (5%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC------KMG 130
           PSP +  F  L+    ++  Y     L K++   G  P   V N+LI  +C       M 
Sbjct: 9   PSPMI--FNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSME 66

Query: 131 ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
           +   A      +L      N V        LC  G+  +A  + +++      P+  T++
Sbjct: 67  VIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYS 126

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
            +I  LC       A +LF+EM         PDV TY +++D  CK G +++A+    +M
Sbjct: 127 KVIGYLCNASKVEKAFQLFQEMKRNG---ITPDVYTYTTLLDRFCKVGLIEQARNWFDEM 183

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
           +     PNV+TY +LI  +        A  +F  M+ NG  P++VT+ A+I+ +CK G+ 
Sbjct: 184 QQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGET 243

Query: 311 DKVNRLLELMIQRGVN-----------------PDTVTYNSLMDGFCLVGRISRARELFV 353
           +K  ++   M    V+                 P+ VTY +L+DG C   ++  AR+L  
Sbjct: 244 EKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLE 303

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
           +M  +GC  +   Y+ LI+  CK  K+++A  ++ +ML     P+V TY++L+  LF+  
Sbjct: 304 TMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDK 363

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L  ALK++ KM  N   P+   +   +DGLCK G   EA ++   +    C   + TY 
Sbjct: 364 RLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYT 423

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
            +I+G  K GR+    +L   +  KG  P+ +T   +I+  C  G +D A+ LL +M+
Sbjct: 424 AMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMK 481



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 241/497 (48%), Gaps = 17/497 (3%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  ++++ ++  L    + +    LF+ +  NG+ PD++    L++  CK+G+   A   
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              + +    PN VT+  LI+      ++  A  +F+ +    C PN+VT+  LI+G C+
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239

Query: 199 TRNTLVALKLFEEMVNEF--------------GAICKPDVVTYNSIIDGLCKDGFVDKAK 244
              T  A +++  M N+                 + +P+VVTY +++DGLCK   V +A+
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           +LL  M      PN I Y++LI GFC V    EA+ +F +M+ +G  P+V T++++I+  
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            KD ++D   ++L  M++    P+ V Y  ++DG C VG+   A  L + M  KGC  +V
Sbjct: 360 FKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNV 419

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            +Y  +I+   K  +V+  + L + M S+   P+ ITY  L++     G L DA KL+++
Sbjct: 420 VTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEE 479

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+          +   I+G   + FV     + +   +    + +  Y  LI+   K GR
Sbjct: 480 MKQTYWPKHIGMYRKVIEGF-SHEFVASLGLLAELSEDGSVPI-LPVYKLLIDNFIKAGR 537

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           L+ A +L   L          T  ++I  L    ++DKA  L  DM  +  VP       
Sbjct: 538 LEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVC 596

Query: 545 LLRGFVQNNKKSKVVVL 561
           L++G ++  K  + + L
Sbjct: 597 LIKGLLRVGKWEEALQL 613



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 240/518 (46%), Gaps = 24/518 (4%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           +++   ++ + + S G  PD    + +I  LC       AF +   + R+  TP+  T+ 
Sbjct: 102 KFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYT 161

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            L++  C  G I +A   F ++    C PNVVT+  LI+   +TR    A ++FE M++ 
Sbjct: 162 TLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSN 221

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN-----------------PN 258
               C P++VTY ++IDG CK G  +KA ++  +MK+  ++                 PN
Sbjct: 222 G---CVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPN 278

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           V+TY +L+ G C     KEA+ L   M   G +P+ + ++A+I+  CK GK+D+   +  
Sbjct: 279 VVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFT 338

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+  G +P+  TY+SL+D      R+  A ++   M+   C  +V  Y  +++  CK  
Sbjct: 339 KMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVG 398

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           K ++A  L   M  +   P+V+TY  ++ G  + G +   L+L+  M      P+  T+ 
Sbjct: 399 KTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYR 458

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I+  C  G + +A ++ + ++       I  Y  +I G         +  L   L   
Sbjct: 459 VLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSH--EFVASLGLLAELSED 516

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           G +P +     +I    K G+++ A +L  ++ + +    + T+ +L+       K  K 
Sbjct: 517 GSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFS-AAYQNTYVSLIESLTLACKVDKA 575

Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
             L   M   +  V +LS+   ++  L +  K+ E L 
Sbjct: 576 FKLYSDM-TRRGFVPELSMLVCLIKGLLRVGKWEEALQ 612



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 228/483 (47%), Gaps = 27/483 (5%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A   F  M +   +P + ++T LL    K    +   + F  +  +G  P++     L
Sbjct: 139 EKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTAL 198

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K    S A  +   +L +   PN VT+  LI+G C  G   +A +++ ++     
Sbjct: 199 IHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKV 258

Query: 183 D-----------------PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           D                 PNVVT+  L++GLC+      A  L E M  E    C+P+ +
Sbjct: 259 DIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEG---CEPNQI 315

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
            Y+++IDG CK G +D+A+E+  +M     +PNV TY+SLI           A  +  +M
Sbjct: 316 IYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKM 375

Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
           ++N   P+VV +  M++  CK GK D+  RL+ +M ++G  P+ VTY +++DGF   GR+
Sbjct: 376 LENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRV 435

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
            R  EL   M SKGC  +  +Y +LIN  C    ++DA  L  EM        +  Y  +
Sbjct: 436 DRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKV 495

Query: 406 LSGLFQ--VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
           + G     V +LG    L+ ++  +  VP    +   ID   K G +  A+++ + + + 
Sbjct: 496 IEGFSHEFVASLG----LLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSF 551

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
               +  TY  LI  L    ++  A KL+  +  +G +P++     +I  L + G+ ++A
Sbjct: 552 SAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEA 610

Query: 524 NDL 526
             L
Sbjct: 611 LQL 613



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 158/364 (43%), Gaps = 59/364 (16%)

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG------ 338
           M+  G  P  + FN++++  C+ G      +LL+ M+  G  P  V YN L+ G      
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 339 -----------------------------------FCLVGRISRARELFVSMVSKGCRHD 363
                                               C +G+  +A  +   M+SKG   D
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y+ +I   C   KVE A  L++EM    I P V TY TLL    +VG +  A    D
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +MQ +   P+  T+   I    K   +  A ++F+ + +  C   I TY  LI+G CK G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 484 RLKTACKLFHRLQH-KGPIPD----------------VVTCSTMIHWLCKEGQMDKANDL 526
             + AC+++ R+++ K  IPD                VVT   ++  LCK  ++ +A DL
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           L  M  + C P+++ +  L+ GF +  K  +   +  KM       +  + SS ++D L 
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSS-LIDKLF 360

Query: 587 KDKK 590
           KDK+
Sbjct: 361 KDKR 364



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 177/398 (44%), Gaps = 7/398 (1%)

Query: 34  TDLSSHHFKDG-TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLA 92
           T L   H K G T  A  +  R K+  +   +   +F  +      P + ++  L+  L 
Sbjct: 231 TALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLC 290

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           K  +      L + ++  G  P+  + + LI+  CK+G    A  V  ++L    +PN  
Sbjct: 291 KAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVY 350

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T++ LI+ L  + R+  A ++  K+   +C PNVV +  +++GLC+   T  A +L   M
Sbjct: 351 TYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLM-LM 409

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           + E G  C P+VVTY ++IDG  K G VD+  ELL  M  +   PN ITY  LI   CC 
Sbjct: 410 MEEKG--CYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLI-NHCCA 466

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
               +     +E M     P  +     +        +  +  L EL  + G  P    Y
Sbjct: 467 AGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELS-EDGSVPILPVY 525

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
             L+D F   GR+  A EL   + S    +   +Y  LI +     KV+ A  LY +M  
Sbjct: 526 KLLIDNFIKAGRLEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTR 584

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
               P +     L+ GL +VG   +AL+L D +   D+
Sbjct: 585 RGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMDI 622



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 6/271 (2%)

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           +MI  G  P  + +NSL+  +C  G    A +L   MV  G +     YNILI   C  +
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 379 KVED------AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
            +        A   Y EML   +  + +        L  +G    A  +I +M     +P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           DS T++  I  LC    V +A Q+FQ ++       + TY  L++  CK+G ++ A   F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +Q  G  P+VVT + +IH   K  ++ +AN++   M +  CVP+ VT+  L+ G  + 
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
            +  K   +  +M  +K+ + D+ +  ++VD
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIVD 271



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 134/305 (43%), Gaps = 14/305 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA   F  M+    SP + +++ L+  L K+K+ D  + +  ++  N   P++ +   +
Sbjct: 331 DEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEM 390

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LCK+G T  A+ ++  +      PN VT+  +I+G    GR+     L + +    C
Sbjct: 391 VDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGC 450

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +T+  LIN  C       A KL EEM   +       +  Y  +I+G   + FV  
Sbjct: 451 APNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWP---KHIGMYRKVIEGFSHE-FV-A 505

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM--MDNGVQPDVVTFNAM 300
           +  LL ++ +    P +  Y  LI  F      + A  L  E+       Q   V+    
Sbjct: 506 SLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIES 565

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +   C   K+DK  +L   M +RG  P+      L+ G   VG+   A +L  S+    C
Sbjct: 566 LTLAC---KVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSI----C 618

Query: 361 RHDVY 365
           + D++
Sbjct: 619 QMDIH 623


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/514 (29%), Positives = 247/514 (48%), Gaps = 4/514 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F  M + +  P   S    L  LAK  + D     F+ +   G+   +F  N++
Sbjct: 199 EEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIM 258

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I  +CK G    A  +  ++ +   TP+ VT+N LI+G    G + E+  LF+++    C
Sbjct: 259 IGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGC 318

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
           +P+V+T+N LIN  C+      A     EM N   +  KP+VVTY+++ID LCK+  + +
Sbjct: 319 EPDVITYNALINCFCKYEQMPKAFHFLHEMKN---SGLKPNVVTYSTLIDALCKEHMLQQ 375

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A + LL M+   ++PN  TY SLI   C      +A  L  EM+   V  +VVT+  +++
Sbjct: 376 AIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLD 435

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK+G+M +   L   MI+ GV P+  TY +L+ G     R+  A EL   +  K  + 
Sbjct: 436 GLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKP 495

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+  Y  +I   C   K+E+   +  EM +  IR + + Y   +   F+ G   +AL L+
Sbjct: 496 DLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLL 555

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL-RIETYNCLINGLCK 481
            +M    V     TF   IDGLCK G V EA+  F  + +   +   +     LI+GLCK
Sbjct: 556 QEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCK 615

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
              ++ A KLF  +Q K  +PD +  + +I    K     +A ++   M           
Sbjct: 616 NNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHA 675

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           + +L+ G  Q N   +  + L++M  + +V  ++
Sbjct: 676 YTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEI 709



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 245/489 (50%), Gaps = 39/489 (7%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P   V + L +   ++G+   A     R+ R    P   + N  +  L   G+   + + 
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           F+ +       +V T+N +I  +C+  + + A  LF +M  + G    PD+VTYNS+IDG
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQM-KQMG--LTPDIVTYNSLIDG 296

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
             K G +D++  L  +MKD    P+VITYN+LI  FC  +   +A     EM ++G++P+
Sbjct: 297 YGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPN 356

Query: 294 VVTFN-----------------------------------AMINYNCKDGKMDKVNRLLE 318
           VVT++                                   ++I+ NCK G +    +L +
Sbjct: 357 VVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLAD 416

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M+Q  V  + VTY +L+DG C  GR+  A +LF +M+  G   ++ +Y  L++ + K++
Sbjct: 417 EMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNK 476

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +VE+A+ L +E+  ++I+P ++ Y T++ GL     L +   ++ +M+   +  +S  + 
Sbjct: 477 RVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYT 536

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +D   K G  +EA+ + Q + +   E+ I T+  LI+GLCK G ++ A   F R+   
Sbjct: 537 IRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADF 596

Query: 499 GPIP-DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
              P +V  C+ +I  LCK   ++ A  L  +M+ KN VP ++ +  L+ G +++    +
Sbjct: 597 NLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQE 656

Query: 558 VVVLLHKMA 566
            + +  +M+
Sbjct: 657 ALNIRSRMS 665



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 223/489 (45%), Gaps = 40/489 (8%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R+   P    F+ L +     G + EA + F ++  F   P   + N  +  L +T    
Sbjct: 175 RNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGD 234

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           ++ K F +MV   GA     V TYN +I  +CK+G +  AK L  QMK   + P+++TYN
Sbjct: 235 LSNKFFRDMV---GAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYN 291

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           SLI G+  +    E+ CLF EM D G +PDV+T+NA+IN  CK  +M K    L  M   
Sbjct: 292 SLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNS 351

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ P+ VTY++L+D  C    + +A +  + M   G   + ++Y  LI+ANCK   + DA
Sbjct: 352 GLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDA 411

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV------------ 431
           + L  EML  ++  +V+TY TLL GL + G + +A  L   M    V             
Sbjct: 412 LKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHG 471

Query: 432 -----------------------PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
                                  PD   + T I GLC    + E   V   ++ C     
Sbjct: 472 HIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRAN 531

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
              Y   ++   K G+   A  L   +   G    +VT   +I  LCK+G +++A D   
Sbjct: 532 SVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFA 591

Query: 529 DMEAKNCVPSEVTFCT-LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            M   N  P+ V  CT L+ G  +NN       L  +M  + +V   ++ ++ ++D   K
Sbjct: 592 RMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTA-LIDGNLK 650

Query: 588 DKKYRECLN 596
            K ++E LN
Sbjct: 651 HKDFQEALN 659



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 253/532 (47%), Gaps = 27/532 (5%)

Query: 33  KTDLSSHHFKD--GTSIAK-------FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTS 83
           K DLS+  F+D  G  IA+        +    K G++ + +++  F  M +M  +P + +
Sbjct: 232 KGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSL--FHQMKQMGLTPDIVT 289

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  L+    K    D    LF+ +   G  PD+   N LINC CK      AF  L  + 
Sbjct: 290 YNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMK 349

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
            S   PN VT++ LI+ LC E  + +A +    +      PN  T+ +LI+  C+     
Sbjct: 350 NSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLS 409

Query: 204 VALKLFEEMVN-EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
            ALKL +EM+  + G     +VVTY +++DGLCK+G + +A++L   M    + PN+ TY
Sbjct: 410 DALKLADEMLQVQVGF----NVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTY 465

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            +L+ G       + A  L  E+ +  ++PD++ +  +I   C   K+++   ++  M  
Sbjct: 466 TALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKA 525

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            G+  ++V Y   MD +   G+   A  L   M   G    + ++ +LI+  CK   VE+
Sbjct: 526 CGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEE 585

Query: 383 AVCLYREMLSERIRP-SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           A+  +  M    ++P +V     L+ GL +   +  A KL D+MQ  ++VPD   +   I
Sbjct: 586 AIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALI 645

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DG  K+    EA+ +   +     EL +  Y  L+ GL +   ++ A    + +  KG +
Sbjct: 646 DGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIV 705

Query: 502 PDVVTCSTMIHWLCKEGQMDKA---NDLLLD-------MEAKNCVPSEVTFC 543
           PD + C  ++    + G +D+A   +D LL        +E +N +P ++  C
Sbjct: 706 PDEILCIRLLRKYYELGSIDEAIELHDELLKKVPLDELLEEQNLMPEKILRC 757


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 245/491 (49%), Gaps = 10/491 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++  +L    K  +Y     L  R+ S G+  D+   N+LI+ LCK   ++  +++
Sbjct: 8   PTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLL 67

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L ++ +    PN  T+N LINGL  E +I  A R+F ++ +    PN VT+N LI+G C 
Sbjct: 68  LKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCD 127

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
             N   AL+L + M  +     +PD V Y +++ GL K    D AK L+ +++   +   
Sbjct: 128 CGNFEQALRLLDVMEAKG---LRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVG 184

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
              Y ++I G C      E+  L   M  +G  PD++TF+ +IN  CK GK+     ++ 
Sbjct: 185 YRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVIC 244

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M + G+ P+ V Y +L+   C  G I+ A   + +M   G   D +  N+LI++ C+  
Sbjct: 245 KMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAG 304

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK---LIDKMQLNDVVPDSF 435
           +V +A    R M +  + P+ IT++ +++G    G LGDALK   + D+M      P  F
Sbjct: 305 RVAEAEDFMRHMSTIDLAPNSITFDCIING---YGILGDALKAFSMFDEMIKLGHCPSHF 361

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           T+ + + GLCK G + EA ++   + +    +    YN +++  CK G+L  A  LF  +
Sbjct: 362 TYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEM 421

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLRGFVQNNK 554
                +PD  T + ++  L ++G+M  A        A+  + P++V + +L  G  +  +
Sbjct: 422 VQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQ 481

Query: 555 KSKVVVLLHKM 565
            +    +  +M
Sbjct: 482 SNAASYIYEEM 492



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 229/482 (47%), Gaps = 5/482 (1%)

Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
           +  +G  P +   N ++N  CK G    A  ++ R+       +  T+N LI+ LC   R
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
             +   L KK+      PN  T+NTLINGL + R    A ++F EM+        P+ VT
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLM---LNLSPNRVT 117

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           YN +IDG C  G  ++A  LL  M+ + + P+ + Y +L+ G   +  +  AK L   + 
Sbjct: 118 YNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIR 177

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +G+      + AMI+  CK G +D+  +LL++M + G +PD +T++ L++GFC  G+I 
Sbjct: 178 MSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIK 237

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A+E+   M   G   +   Y  LI  +CK   + +A   Y  M            N L+
Sbjct: 238 NAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLI 297

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKC 465
           S L + G + +A   +  M   D+ P+S TF   I+G    G  L+A  +F + I+   C
Sbjct: 298 SSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHC 357

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
                TY  L+ GLCK G L+ A KL ++L H     D    +T++   CK G++  A  
Sbjct: 358 PSHF-TYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVA 416

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           L  +M   N +P   T+  +L G  +  K    ++   K  A   +  +  + + + D L
Sbjct: 417 LFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGL 476

Query: 586 SK 587
            K
Sbjct: 477 FK 478



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 240/501 (47%), Gaps = 4/501 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M      P   ++  LL+ L+K  ++D   SL +R+  +G+         +I
Sbjct: 133 QALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMI 192

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + LCK G+   +  +L  + +   +P+ +TF+ LING C  G+I  A  +  K+      
Sbjct: 193 DGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLA 252

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN V + TLI   C+  +   A + +  M      +   D    N +I  LC+ G V +A
Sbjct: 253 PNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDV---DYFICNVLISSLCRAGRVAEA 309

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           ++ +  M   ++ PN IT++ +I G+  + D  +A  +F EM+  G  P   T+ +++  
Sbjct: 310 EDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKG 369

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK G + +  +LL  +       DT  YN+++   C  G++S A  LF  MV      D
Sbjct: 370 LCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPD 429

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLI 422
            ++Y I++    +  K+  A+  + + L+   + P+ + Y +L  GLF+VG    A  + 
Sbjct: 430 SHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIY 489

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M+   + PD+      +DG  + G + +  ++F  +++      + TYN L++G  K 
Sbjct: 490 EEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKK 549

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
             L    K ++ +   G  PD +TC ++I  LCK G +D    +L  M  ++ +  ++T 
Sbjct: 550 KDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTL 609

Query: 543 CTLLRGFVQNNKKSKVVVLLH 563
             L+    + +K  K   LL+
Sbjct: 610 NMLITNSCETDKMGKAFDLLN 630



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 255/569 (44%), Gaps = 40/569 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E++   D M K   SP + +F++L+    K  +      +  ++   GL P+  +   L
Sbjct: 202 DESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATL 261

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   CK G  + AF     + R+    +    N LI+ LC  GR+ EA    + ++    
Sbjct: 262 IYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDL 321

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +TF+ +ING     + L A  +F+EM+ + G    P   TY S++ GLCK G + +
Sbjct: 322 APNSITFDCIINGYGILGDALKAFSMFDEMI-KLGHC--PSHFTYGSLLKGLCKGGNLRE 378

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           AK+LL ++       +   YN+++   C      +A  LF EM+   V PD  T+  ++ 
Sbjct: 379 AKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILA 438

Query: 303 YNCKDGKMDKVNRLLELMIQRG-VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
              + GKM       E  + RG ++P+ V Y SL DG   VG+ + A  ++  M  KG  
Sbjct: 439 GLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGIN 498

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  + N +++   +  K+E    L+ +M S  + PS+ TYN LL G  +  +L    K 
Sbjct: 499 PDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKF 558

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGF-----------VLEAVQVFQAIRNC----KCE 466
            + M    + PD  T  + I GLCK+G            ++E   V Q   N      CE
Sbjct: 559 YNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCE 618

Query: 467 LR--------------------IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
                                 + TYN +  GL +   L+ +  L H +  +G  P    
Sbjct: 619 TDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQ 678

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
             ++I+ +C+ G +  A  L  +MEA      +V    ++RG  Q  K  + +++L  M 
Sbjct: 679 YISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCML 738

Query: 567 AEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
            ++L+ +  + ++ ++ +L K  K  E L
Sbjct: 739 QKRLIPTVATFTT-LMHMLCKKAKLSEAL 766



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 236/505 (46%), Gaps = 43/505 (8%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           ++ +L+  L KN +      L K++    + P+ F  N LIN L K     GA  V   +
Sbjct: 47  TYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEM 106

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL---------- 192
           L    +PN VT+N LI+G C  G   +A RL   +      P+ V +  L          
Sbjct: 107 LMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKF 166

Query: 193 -------------------------INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
                                    I+GLC+      +L+L + M  + GA   PD++T+
Sbjct: 167 DIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKD-GA--SPDIITF 223

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           + +I+G CK G +  AKE++ +M    + PN + Y +LI   C   D  EA   +  M  
Sbjct: 224 SVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTR 283

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G   D    N +I+  C+ G++ +    +  M    + P+++T++ +++G+ ++G   +
Sbjct: 284 TGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALK 343

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT--YNTL 405
           A  +F  M+  G     ++Y  L+   CK   + +A  L  ++    I  +V T  YNT+
Sbjct: 344 AFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKL--HHIPAAVDTNIYNTI 401

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ-AIRNCK 464
           LS   + G L DA+ L  +M   +V+PDS T+A  + GL + G ++ A+  F+ A+    
Sbjct: 402 LSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGT 461

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
                  Y  L +GL K+G+   A  ++  ++HKG  PD +  + ++    + G+M+K  
Sbjct: 462 LSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVE 521

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGF 549
            L + M++ +  PS  T+  LL G+
Sbjct: 522 KLFIKMQSGSLTPSLATYNILLHGY 546



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 248/509 (48%), Gaps = 4/509 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   FD MIK+   P   ++  LL  L K         L  +L+      D  + N ++
Sbjct: 343 KAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTIL 402

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK-LNVFAC 182
           +  CK G  S A  + G +++    P++ T+  ++ GL  +G+++ A   F+K L     
Sbjct: 403 SETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTL 462

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN V + +L +GL +   +  A  ++EEM  E   I  PD +  N+++DG  + G ++K
Sbjct: 463 SPNKVMYTSLFDGLFKVGQSNAASYIYEEM--EHKGI-NPDTIAINAVLDGYSRMGKMEK 519

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
            ++L ++M+  ++ P++ TYN L+ G+    D  +    +  M   G+ PD +T +++I 
Sbjct: 520 VEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIIL 579

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G +D   ++L+ MI      D +T N L+   C   ++ +A +L       G   
Sbjct: 580 GLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIP 639

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV +YN +     +   + ++  L  +ML   I P+   Y +L++G+ ++G++  A +L 
Sbjct: 640 DVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLK 699

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+M+   V       +  + GL + G V EA+ V   +   +    + T+  L++ LCK 
Sbjct: 700 DEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKK 759

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            +L  A KL  ++   G   DVV  + +I  LC +G    A +L  +M+ +   P+  T+
Sbjct: 760 AKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTY 819

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           CTL+     N  + +  +L++    EKLV
Sbjct: 820 CTLIDAISTNEGEVEERLLVYLEQFEKLV 848



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 60/109 (55%), Gaps = 1/109 (0%)

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           ++  G +P +VT +T+++W CK+G+   A+DL+  ME+K       T+  L+    +NN+
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
            +K  +LL KM    +  ++ + ++ +++ L K++K       F  +L 
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNT-LINGLMKERKIGGATRVFNEMLM 108


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/334 (35%), Positives = 192/334 (57%), Gaps = 18/334 (5%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P  VT+N LI+GLC   R  EA  L +++    C P++ T+ TLI G C+++ +  AL++
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNSLIC 267
           FE++V       +PDVVTY+ +IDGLCK+G + +A +L  +M K  +  PN +TYNSLI 
Sbjct: 112 FEQLVARG---FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLIS 168

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GFC +    EA  L   M + G  PDVVT+  ++N  CK  ++D    LL  M ++G+ P
Sbjct: 169 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 228

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           + VT+ SLMDG C   R+S A  +   M  K C   VY+YN +++  C+  ++E+A    
Sbjct: 229 NVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA---- 284

Query: 388 REMLSERI--RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
           R+ + E +   P+V+++N ++ GL +V    +A++L+++ +     PD   + T ID LC
Sbjct: 285 RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLC 344

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +   V EA +V++ +        +E   CL N +
Sbjct: 345 REKKVDEACRVYRKM--------LEEPGCLPNSI 370



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 180/329 (54%), Gaps = 7/329 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  L++ L K ++      L + +  +G  PD+F    LI   CK   +  A  V
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLC 197
             +++   F P+ VT++ LI+GLC EGR+ EA  LF ++    +C PN VT+N+LI+G C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R      A+ L E M  E G+   PDVVTY ++++G CK   +D A +LL QM  + + P
Sbjct: 172 RMGKMDEAMNLLERMA-ETGS--SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 228

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           NV+T+ SL+ G C  +   +A  +  EM      P V T+N +++  C+  ++++  +  
Sbjct: 229 NVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF- 287

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
            ++ +    P+ V++N ++ G C V R S A EL      + C  DV  Y  +I+  C++
Sbjct: 288 -MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCRE 346

Query: 378 QKVEDAVCLYREMLSER-IRPSVITYNTL 405
           +KV++A  +YR+ML E    P+ ITY+T 
Sbjct: 347 KKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 170/320 (53%), Gaps = 3/320 (0%)

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
           ++D    P  +TYNSLI G C  +   EA  L  EM+ +G  PD+ T+  +I   CK  K
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-CRHDVYSYN 368
            D   R+ E ++ RG  PD VTY+ L+DG C  GR+  A +LF  M+  G C  +  +YN
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LI+  C+  K+++A+ L   M      P V+TY TL++G  ++  L DA  L+++M   
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            + P+  TF + +DGLC+   + +AV +   +R   C   + TYN +++G C++ +L+ A
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA 284

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            K    L+     P+VV+ + MI  LCK  +  +A +L+ +   + C P  V + T++  
Sbjct: 285 RKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342

Query: 549 FVQNNKKSKVVVLLHKMAAE 568
             +  K  +   +  KM  E
Sbjct: 343 LCREKKVDEACRVYRKMLEE 362



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 175/310 (56%), Gaps = 9/310 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           ++EA    + M+     P + ++T L+T   K+K+ D  + +F++L + G  PD+   + 
Sbjct: 70  ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 129

Query: 122 LINCLCKMGITSGAFVVLGRILR--SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           LI+ LCK G    A  + GR+++  SC  PNTVT+N LI+G C  G++ EA  L +++  
Sbjct: 130 LIDGLCKEGRLKEAIDLFGRMIKSGSCM-PNTVTYNSLISGFCRMGKMDEAMNLLERMAE 188

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+VVT+ TL+NG C+      A  L  +M  +      P+VVT+ S++DGLC++  
Sbjct: 189 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG---LTPNVVTFTSLMDGLCRENR 245

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +  A  +L +M+ ++ +P V TYN+++ G+C V+  +EA+   +E MD    P+VV+FN 
Sbjct: 246 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--CPPNVVSFNI 303

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK- 358
           MI   CK  +  +   L+E   +R  NPD V Y +++D  C   ++  A  ++  M+ + 
Sbjct: 304 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEP 363

Query: 359 GCRHDVYSYN 368
           GC  +  +Y+
Sbjct: 364 GCLPNSITYS 373



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 177/329 (53%), Gaps = 4/329 (1%)

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
           W   +     + D    P  VT+N++I+  CK  +  +   LLE M+  G  PD  TY +
Sbjct: 35  WPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 94

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML-SE 393
           L+ GFC   +   A  +F  +V++G R DV +Y+ LI+  CK+ ++++A+ L+  M+ S 
Sbjct: 95  LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 154

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
              P+ +TYN+L+SG  ++G + +A+ L+++M      PD  T+ T ++G CK   + +A
Sbjct: 155 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 214

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
             +   +        + T+  L++GLC+  RL  A  +   ++ K   P V T +T++  
Sbjct: 215 YDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 274

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
            C+  Q+++A   +L  E  +C P+ V+F  ++RG  + N+ S+ + L+ + A  +    
Sbjct: 275 YCRVNQLEEARKFML--EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEE-ARRRRCNP 331

Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           D+ + + V+D+L ++KK  E    +R +L
Sbjct: 332 DVVMYTTVIDVLCREKKVDEACRVYRKML 360



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 6/204 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+   + M +   SP + ++T L+    K  + D    L  ++   GL P++     L
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LC+    S A  +LG + R   +P   T+N +++G C   ++ EA +    L    C
Sbjct: 237 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDC 294

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNVV+FN +I GLC+   +  A++L EE        C PDVV Y ++ID LC++  VD+
Sbjct: 295 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR---CNPDVVMYTTVIDVLCREKKVDE 351

Query: 243 AKELLLQM-KDRNINPNVITYNSL 265
           A  +  +M ++    PN ITY++ 
Sbjct: 352 ACRVYRKMLEEPGCLPNSITYSTF 375


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 222/429 (51%), Gaps = 8/429 (1%)

Query: 130 GITSGAFVVLGRILRSCFTPNTVT---FNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           G    A  +LG+ + SC  P +VT    + +++G C  G + +A  L  +L       N 
Sbjct: 126 GQLPAAADLLGKAIASC--PASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNA 183

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
             +N+L++   R RN      L +EM N      +P V TY  ++DGL + G + K + +
Sbjct: 184 CCYNSLLDSYTRQRNDDAVAGLLKEMENRG---VEPTVGTYTILVDGLSRAGDISKVEAV 240

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
             +MK +N+  +V  Y+++I  +C   + + A  +F E + +GV+P+  T+ A+IN  CK
Sbjct: 241 YDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCK 300

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G+++    LL  M  RGV  + + +N+++DG+C  G + +A E+   M   G   D+Y+
Sbjct: 301 IGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYT 360

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN L    C+  ++EDA  L   M  + + P+ ++Y TL+S   + G++ +A +L   M+
Sbjct: 361 YNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDME 420

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                P   T+   IDG  KNG + EA +  + +        I TY  L++G C  G++ 
Sbjct: 421 GKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVD 480

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +LF  ++H+G  P+VV  + ++  L KEG+ ++A  L  DM A    P +  +  L+
Sbjct: 481 VALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540

Query: 547 RGFVQNNKK 555
                +++K
Sbjct: 541 GSLHTDSRK 549



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 207/402 (51%), Gaps = 3/402 (0%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           +++++  CK G    A  +L  + R     N   +N L++    +      A L K++  
Sbjct: 152 SVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMEN 211

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
              +P V T+  L++GL R  +      +++EM  +  A    DV  Y+++I+  C+ G 
Sbjct: 212 RGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVA---GDVYFYSAVINAYCRGGN 268

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           V +A E+  +     + PN  TY +LI GFC +   + A+ L  +M   GV  + + FN 
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           MI+  C+ G ++K   +  +M + G+  D  TYN+L  G C V R+  A++L   M  KG
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
              +  SY  LI+ + K+  + +A  L+R+M  +  RPSV+TYN ++ G  + G++ +A 
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAE 448

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +   +M+   +VPD +T+A  + G C NG V  A+++F+ +++   +  +  Y  L++GL
Sbjct: 449 RFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGL 508

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
            K GR + A +L+  +   G  PD    S ++  L  + + D
Sbjct: 509 AKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKD 550



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 180/361 (49%), Gaps = 3/361 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  LL    + +  D V  L K + + G+ P +    +L++ L + G  S    V   + 
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           R     +   ++ +IN  C  G +  A+ +F +      +PN  T+  LING C+     
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  L  +M  +   +    +V +N++IDG C+ G V+KA E+   M+   I  ++ TYN
Sbjct: 306 AAEMLLADM--QLRGVGHNQIV-FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYN 362

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           +L CG C V+  ++AK L   M + GV P+ V++  +I+ + K+G M +  RL   M  +
Sbjct: 363 TLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGK 422

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G  P  VTYN ++DG+   G I  A      M  KG   D+Y+Y  L++ +C + KV+ A
Sbjct: 423 GSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVA 482

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + L+ EM     +P+V+ Y  L+SGL + G   +A +L D M    + PD   ++  +  
Sbjct: 483 LRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGS 542

Query: 444 L 444
           L
Sbjct: 543 L 543



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 210/431 (48%), Gaps = 13/431 (3%)

Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNT--LINGLCRTRNTLVALKLFEEMVNE---FGAI 219
           G++  AA L  K  + +C  +V   +   +++G C++ +   A  L +E+        A 
Sbjct: 126 GQLPAAADLLGKA-IASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNAC 184

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C      YNS++D   +    D    LL +M++R + P V TY  L+ G     D  + +
Sbjct: 185 C------YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVE 238

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            ++ EM    V  DV  ++A+IN  C+ G + + + + +  +  GV P+  TY +L++GF
Sbjct: 239 AVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGF 298

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C +G+I  A  L   M  +G  H+   +N +I+  C+   VE A+ +   M    I   +
Sbjct: 299 CKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDI 358

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            TYNTL  GL +V  + DA KL+  M    V P+  ++ T I    K G ++EA ++F+ 
Sbjct: 359 YTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRD 418

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +        + TYN +I+G  K G ++ A +    ++ KG +PD+ T + ++H  C  G+
Sbjct: 419 MEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGK 478

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           +D A  L  +M+ +   P+ V +  L+ G  +  +  +   L   M A  L   D +L S
Sbjct: 479 VDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDD-TLYS 537

Query: 580 KVVDLLSKDKK 590
            +V  L  D +
Sbjct: 538 VLVGSLHTDSR 548



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 171/334 (51%), Gaps = 9/334 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + ++TIL+  L++      V +++  +    +  D++  + +IN  C+ G    A  V
Sbjct: 216 PTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEV 275

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
               +     PN  T+  LING C  G+I  A  L   + +     N + FNT+I+G CR
Sbjct: 276 FDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCR 335

Query: 199 TRNTLVALKL---FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
                 AL++    E+M  E       D+ TYN++  GLC+   ++ AK+LL  M ++ +
Sbjct: 336 HGMVEKALEIKAVMEKMGIEL------DIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
            PN ++Y +LI       D  EA+ LF +M   G +P VVT+N MI+   K+G + +  R
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
             + M ++G+ PD  TY  L+ G C+ G++  A  LF  M  +G + +V +Y  L++   
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA 509

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           K+ + E+A  LY +ML+  + P    Y+ L+  L
Sbjct: 510 KEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 135/281 (48%), Gaps = 5/281 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           + GN+    A   FD  +     P   ++  L+    K  Q +    L   +   G+  +
Sbjct: 265 RGGNV--RRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHN 322

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
             V N +I+  C+ G+   A  +   + +     +  T+N L  GLC   R+ +A +L  
Sbjct: 323 QIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLH 382

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
            +      PN V++ TLI+   +  + + A +LF +M    G   +P VVTYN +IDG  
Sbjct: 383 IMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDME---GKGSRPSVVTYNVMIDGYI 439

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G + +A+    +M+ + + P++ TY  L+ G C       A  LF EM   G +P+VV
Sbjct: 440 KNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVV 499

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
            + A+++   K+G+ ++  +L + M+  G+ PD   Y+ L+
Sbjct: 500 AYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 3/205 (1%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G+  D++  N L   LC++     A  +L  +      PN V++  LI+    EG ++EA
Sbjct: 353 GIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEA 412

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
            RLF+ +      P+VVT+N +I+G  +  +   A +  +EM  + G +  PD+ TY  +
Sbjct: 413 RRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKK-GLV--PDIYTYAGL 469

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           + G C +G VD A  L  +MK R   PNV+ Y +L+ G       +EA  L+ +M+  G+
Sbjct: 470 VHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGL 529

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNR 315
            PD   ++ ++     D + D + R
Sbjct: 530 TPDDTLYSVLVGSLHTDSRKDPLPR 554


>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
 gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
 gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/430 (32%), Positives = 222/430 (51%), Gaps = 9/430 (2%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
             +  NLL   LCK G+   A  +   +     +PN     FL++    +G++  A  L 
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
             L  F  +   +  N+L+N L +      A+KLF+E +  F + C  D  T+N +I GL
Sbjct: 162 --LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHL-RFQS-CN-DTKTFNILIRGL 216

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV-QPD 293
           C  G  +KA ELL  M      P+++TYN+LI GFC  ++  +A  +F ++    V  PD
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VVT+ +MI+  CK GKM + + LL+ M++ G+ P  VT+N L+DG+   G +  A E+  
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+S GC  DV ++  LI+  C+  +V     L+ EM +  + P+  TY+ L++ L    
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
            L  A +L+ ++   D++P  F +   IDG CK G V EA  + + +   KC+    T+ 
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA---NDLLLDM 530
            LI G C  GR+  A  +FH++   G  PD +T S+++  L K G   +A   N +    
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKG 516

Query: 531 EAKNCVPSEV 540
           ++ N VP E 
Sbjct: 517 QSNNVVPLET 526



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 202/398 (50%), Gaps = 6/398 (1%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLA-KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           A   F+CM     SP       L++  A K K +     L +     G      V+N L+
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC---CMVVNSLL 178

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N L K+     A  +    LR     +T TFN LI GLC  G+  +A  L   ++ F C+
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++VT+NTLI G C++     A ++F+++ +  G++C PDVVTY S+I G CK G + +A
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKS--GSVCSPDVVTYTSMISGYCKAGKMREA 296

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL  M    I P  +T+N L+ G+    +   A+ +  +M+  G  PDVVTF ++I+ 
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G++ +  RL E M  RG+ P+  TY+ L++  C   R+ +AREL   + SK     
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            + YN +I+  CK  KV +A  +  EM  ++ +P  IT+  L+ G    G + +A+ +  
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           KM      PD  T ++ +  L K G   EA  + Q  R
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 205/421 (48%), Gaps = 26/421 (6%)

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
           R  E +R   KLN+     +  T+N L   LC+     +A ++FE M        K D V
Sbjct: 88  RFWEFSRF--KLNI---RHSFWTYNLLTRSLCKAGLHDLAGQMFECM--------KSDGV 134

Query: 226 TYNSIIDGLCKDGFVDKAK-----ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           + N+ + G     F +K K      LLLQ  +  +    +  NSL+     +D  ++A  
Sbjct: 135 SPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMK 192

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           LF E +      D  TFN +I   C  GK +K   LL +M   G  PD VTYN+L+ GFC
Sbjct: 193 LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFC 252

Query: 341 LVGRISRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
               +++A E+F  + S   C  DV +Y  +I+  CK  K+ +A  L  +ML   I P+ 
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTN 312

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +T+N L+ G  + G +  A ++  KM      PD  TF + IDG C+ G V +  ++++ 
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +          TY+ LIN LC   RL  A +L  +L  K  IP     + +I   CK G+
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA-----EKLVVSD 574
           +++AN ++ +ME K C P ++TF  L+ G     +  + V + HKM A     +K+ VS 
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492

Query: 575 L 575
           L
Sbjct: 493 L 493



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  FD  ++ +      +F IL+  L    + +  + L   ++  G  PD+   N LI
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248

Query: 124 NCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
              CK    + A  +   +   S  +P+ VT+  +I+G C  G++ EA+ L   +     
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P  VTFN L++G  +    L A ++  +M++ FG  C PDVVT+ S+IDG C+ G V +
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-FG--CFPDVVTFTSLIDGYCRVGQVSQ 365

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
              L  +M  R + PN  TY+ LI   C  +   +A+ L  ++    + P    +N +I+
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK GK+++ N ++E M ++   PD +T+  L+ G C+ GR+  A  +F  MV+ GC  
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485

Query: 363 DVYSYNILINANCKDQKVEDAVCL 386
           D  + + L++   K    ++A  L
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHL 509



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 2/199 (1%)

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           IR S  TYN L   L + G    A ++ + M+ + V P++      +    + G +  A 
Sbjct: 99  IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
            +   +++ + E      N L+N L K+ R++ A KLF          D  T + +I  L
Sbjct: 159 ALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSD 574
           C  G+ +KA +LL  M    C P  VT+ TL++GF ++N+ +K   +   + +  +   D
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276

Query: 575 LSLSSKVVDLLSKDKKYRE 593
           +   + ++    K  K RE
Sbjct: 277 VVTYTSMISGYCKAGKMRE 295


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 245/491 (49%), Gaps = 12/491 (2%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           +  +L +L+K +       + + +   G+       + ++    + G+   A  +L  + 
Sbjct: 200 YYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQ 259

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           ++   P+    N  I  L    ++ +A R  +++ V   +P++V++N LI G C      
Sbjct: 260 KAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRID 319

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITY 262
            AL+L  EM   F   C PD V+Y +++  LCKD  V++ K L+  M ++ N+ P+ +TY
Sbjct: 320 DALELIAEM--PFKG-CPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTY 376

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           N+LI          +A     E  + G   D V ++A+++  CK+  +DK   L+  M  
Sbjct: 377 NTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYS 436

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
           +G NPD VTY +++DGFC VG+I  A+++   M   GC+ +  +Y +L+N  C + K  +
Sbjct: 437 KGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLE 496

Query: 383 AVCLYREML--SER--IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           A    REM+  SE     P+ ITY+ ++ GL + G L +A  L  +M     +P+     
Sbjct: 497 A----REMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDIN 552

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             I  LC+N  V+ A +  +   +  C + +  +  +I G C++G L  A  +   +   
Sbjct: 553 LLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLS 612

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
              PD +T +T+   L K+ ++D+A++L++ M  K   P+ VT+  ++  F Q  +   +
Sbjct: 613 NKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDM 672

Query: 559 VVLLHKMAAEK 569
           + LL KM A +
Sbjct: 673 MKLLEKMIARQ 683



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 226/480 (47%), Gaps = 39/480 (8%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           +F+ ++   ++       + +   +   G+ PDL + N  I  L K      A   L R+
Sbjct: 234 AFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERM 293

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
             +   P+ V++N LI G C   RI +A  L  ++    C P+ V++ T++  LC+ R  
Sbjct: 294 KVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKV 353

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSII------------------------------- 231
               +L E MV     I  PD VTYN++I                               
Sbjct: 354 EEVKRLMENMVQNSNLI--PDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGY 411

Query: 232 ----DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
               D  CK+  +DKAK L++ M  +  NP+V+TY ++I GFC V    EAK +  +M  
Sbjct: 412 SAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYK 471

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           +G +P+ VT+  ++N  C +GK  +   ++ +  +    P+ +TY+++M G    G++S 
Sbjct: 472 HGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSE 531

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           A +L   M+ KG   +    N+LI + C++Q V  A     E L +    +V+ + +++ 
Sbjct: 532 ACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIY 591

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G  Q+G+L  AL +++ M L++  PD+ T+ T  D L K   + EA ++   +     + 
Sbjct: 592 GFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDP 651

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
              TY  +I+  C+ GR+    KL  ++  + P   V   + +I  LC  G  ++A  LL
Sbjct: 652 TPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTVY--NQVIEKLCYFGNREEAEKLL 709



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 219/458 (47%), Gaps = 20/458 (4%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG-LFPDLFVLNLLINCLCKMGITSGAFV 137
           P   S+  ++  L K+++ + V  L + +  N  L PD    N LI  L K G    A V
Sbjct: 335 PDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALV 394

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
            L       F  + V ++ +++  C    I +A  L   +    C+P+VVT+  +I+G C
Sbjct: 395 FLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFC 454

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           R      A K+ ++M   +   CKP+ VTY  +++GLC +G   +A+E++   ++    P
Sbjct: 455 RVGKIDEAKKMLQQM---YKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTP 511

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           N ITY++++ G        EA  L  EM++ G  P+ V  N +I   C++  +    + L
Sbjct: 512 NAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYL 571

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           E  + +G   + V + S++ GFC +G +  A  +   M       D  +Y  L +A  K 
Sbjct: 572 EECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKK 631

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            ++++A  L  +ML + I P+ +TY  ++    Q G + D +KL++KM      P    +
Sbjct: 632 SRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ--PFKTVY 689

Query: 438 ATYIDGLCKNGFVLEAVQVF-QAIRNCK------CELRIETYNCLINGLCKMGRLKTACK 490
              I+ LC  G   EA ++  + +R         C + IE+Y  LI+G   +   K AC+
Sbjct: 690 NQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESY--LIDG-NALSAYKVACQ 746

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           +F R      IPD+  C  +   L  +G   +A+DL+L
Sbjct: 747 MFRR----NLIPDLKLCEKVTKKLVLDGMPAEADDLML 780



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 170/346 (49%), Gaps = 1/346 (0%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           + D + Y +++D L K      A+ +L  M  R I  +   ++ ++  +      + A  
Sbjct: 194 RHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALR 253

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +   M   GV+PD+   N  I    K  K++K  R LE M   G+ PD V+YN L+ G+C
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYC 313

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML-SERIRPSV 399
            V RI  A EL   M  KGC  D  SY  ++   CKD+KVE+   L   M+ +  + P  
Sbjct: 314 DVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQ 373

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +TYNTL+  L + G+  DAL  + + +      D   ++  +D  CKN  + +A  +   
Sbjct: 374 VTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVID 433

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           + +  C   + TY  +I+G C++G++  A K+  ++   G  P+ VT + +++ LC  G+
Sbjct: 434 MYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGK 493

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             +A +++   E     P+ +T+  ++ G  +  K S+   L  +M
Sbjct: 494 SLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREM 539



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/347 (21%), Positives = 143/347 (41%), Gaps = 65/347 (18%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P + ++T ++    +  + D    + +++  +G  P+     +L+N LC  G +  A  
Sbjct: 440 NPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEARE 499

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           ++       +TPN +T++ +++GL  EG++ EA  L +++      PN V  N LI  LC
Sbjct: 500 MINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLC 559

Query: 198 RTRNTLVALKLFEEMVNEFGAI------------CK--------------------PDVV 225
           R +N + A K  EE +++  A+            C+                    PD +
Sbjct: 560 RNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAI 619

Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY----------------------- 262
           TY ++ D L K   +D+A EL+++M  + I+P  +TY                       
Sbjct: 620 TYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKM 679

Query: 263 ----------NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
                     N +I   C   + +EA+ L  +++    + D  T + +I     DG    
Sbjct: 680 IARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALS 739

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             ++   M +R + PD      +     L G  + A +L +  V +G
Sbjct: 740 AYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERG 786



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 2/230 (0%)

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
           RHD   Y  +++   K +  + A  + R M    I  S   ++ ++    + G L +AL+
Sbjct: 194 RHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALR 253

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           ++  MQ   V PD     T I  L K   + +A++  + ++    E  I +YNCLI G C
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYC 313

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM-EAKNCVPSE 539
            + R+  A +L   +  KG  PD V+  T++ +LCK+ ++++   L+ +M +  N +P +
Sbjct: 314 DVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQ 373

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           VT+ TL+    ++      +V L + A EK    D    S VVD   K+K
Sbjct: 374 VTYNTLIYALSKHGHADDALVFLRE-AEEKGFHIDKVGYSAVVDSFCKNK 422



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 87/194 (44%)

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
           R R   I Y T+L  L +      A +++  M    +      F+  +    + G +  A
Sbjct: 192 RYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNA 251

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           +++   ++    E  +   N  I  L K  +L+ A +   R++  G  PD+V+ + +I  
Sbjct: 252 LRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKG 311

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
            C   ++D A +L+ +M  K C P +V++ T++    ++ K  +V  L+  M     ++ 
Sbjct: 312 YCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIP 371

Query: 574 DLSLSSKVVDLLSK 587
           D    + ++  LSK
Sbjct: 372 DQVTYNTLIYALSK 385



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 76/194 (39%), Gaps = 5/194 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+   + M      P   ++T L   L K  + D    L  ++   G+ P       +
Sbjct: 600 DAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAV 659

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  C+ G       +L +++     P    +N +I  LC  G   EA +L  K+   A 
Sbjct: 660 IHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTAS 717

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +  T + LI       N L A K+  +M   F     PD+     +   L  DG   +
Sbjct: 718 KLDAKTCHILIESYLIDGNALSAYKVACQM---FRRNLIPDLKLCEKVTKKLVLDGMPAE 774

Query: 243 AKELLLQMKDRNIN 256
           A +L+L+  +R I 
Sbjct: 775 ADDLMLRFVERGIQ 788


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 251/534 (47%), Gaps = 50/534 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +  ++ FD M+          +   + +L KN  +D V   +      G     F  +  
Sbjct: 178 DSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVALDKGFCLTSFTYSRW 237

Query: 123 INCLCKMGITSGAFVVLGRILR-----SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           I+ LC+    S    ++ R+L       CF P+    N  ++ LC   R+ +A +  + +
Sbjct: 238 ISALCQ----SERIELVERLLADMDKFGCF-PDIWACNIYVDCLCKHNRLHDALKTLENM 292

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
            +   +P+VVT+ T++  LC  +    A++L+EEMV       KPD+V    +I GLCK 
Sbjct: 293 WIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRG---LKPDIVACGVLIFGLCKS 349

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             VD+A EL L+M   N+  NV  YN+LI GF       +A  +   M  NG +PDVVT+
Sbjct: 350 DKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTY 409

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRG-VNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           N  +N+ C  G + +  +L+E M   G VNPD  +YN ++ G C   ++ RA       +
Sbjct: 410 NIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHM 469

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
             G   D+ S NILI+A CK +KV                                    
Sbjct: 470 EVGGFCDIVSCNILIDAFCKAKKV-----------------------------------S 494

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
            ALKL  +M    +  D+ T+ T I+GL   G+   A ++F+ +   +    +  YN ++
Sbjct: 495 SALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIML 554

Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           + LCK G+ + A K+F ++  K   PD++T +T+I+WL K  +  +A DL  DM A+   
Sbjct: 555 HNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIE 614

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           P  +TF  L+ G ++  K ++   +   M  E  ++ D  +S +++ +   + K
Sbjct: 615 PDSLTFRYLISGLLEEGKATQAYEVWEYM-LENGIILDRDVSDRLISMFKSNNK 667



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 166/361 (45%), Gaps = 4/361 (1%)

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           +  L++G  R       +  F+EMV    + C+   V YN  I  L K+   D  ++   
Sbjct: 164 YRILLSGYVRAGKFDSVIHTFDEMVT---SGCREFGVDYNRFIGVLVKNCCFDLVEKYYS 220

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
              D+       TY+  I   C  +  +  + L  +M   G  PD+   N  ++  CK  
Sbjct: 221 VALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHN 280

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           ++    + LE M  RG NPD VTY +++   C   + + A EL+  MV +G + D+ +  
Sbjct: 281 RLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACG 340

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
           +LI   CK  KV++A  L   MLS  +  +V  YN L+SG  + G++  A K+I  M+ N
Sbjct: 341 VLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTN 400

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR-NCKCELRIETYNCLINGLCKMGRLKT 487
              PD  T+   ++  C  G + EA ++ + +  +        +YN ++ GLCK  +L  
Sbjct: 401 GCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDR 460

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
           A          G   D+V+C+ +I   CK  ++  A  L  +M  K      VT+ TL+ 
Sbjct: 461 AFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLIN 520

Query: 548 G 548
           G
Sbjct: 521 G 521



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 158/358 (44%), Gaps = 2/358 (0%)

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           E L +++ + +  +   Y  L+ G+     +      F EM+ +G +   V +N  I   
Sbjct: 147 EFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVL 206

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
            K+   D V +   + + +G    + TY+  +   C   RI     L   M   GC  D+
Sbjct: 207 VKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDI 266

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           ++ NI ++  CK  ++ DA+     M      P V+TY T++  L       +A++L ++
Sbjct: 267 WACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEE 326

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M    + PD       I GLCK+  V EA ++   + +   EL +  YN LI+G  + G 
Sbjct: 327 MVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGS 386

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFC 543
           +  A K+   ++  G  PDVVT +  ++  C  G + +A  L+ +ME    V P   ++ 
Sbjct: 387 INKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYN 446

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            +L+G  + ++  +    +     E     D+   + ++D   K KK    L  F+ +
Sbjct: 447 QMLKGLCKAHQLDRAFGFVSD-HMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEM 503



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 3/264 (1%)

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
           ++  LE +  +GV      Y  L+ G+   G+       F  MV+ GCR     YN  I 
Sbjct: 145 LSEFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIG 204

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
              K+   +     Y   L +    +  TY+  +S L Q   +    +L+  M      P
Sbjct: 205 VLVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFP 264

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D +    Y+D LCK+  + +A++  + +        + TY  ++  LC   +   A +L+
Sbjct: 265 DIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELW 324

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +  +G  PD+V C  +I  LCK  ++D+A +L L M + N   +   +  L+ GF+++
Sbjct: 325 EEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRS 384

Query: 553 ---NKKSKVVVLLHKMAAEKLVVS 573
              NK  K++ ++     E  VV+
Sbjct: 385 GSINKAFKIISVMRTNGCEPDVVT 408


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 233/484 (48%), Gaps = 46/484 (9%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P +   N+LI  LC     + A  VL   L++    + V+ N L+ G C +G + +A R+
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVL-EALKTSGAADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            +         NVVT+  LI+G CR+     AL+L   M         PD  TYN+++ G
Sbjct: 176 LEAARASGA-ANVVTYTALIDGYCRSGRLTDALRLIASMP------VAPDTYTYNTVLKG 228

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LC     ++A+EL+ +M   N +PN +T+ + I  FC       A  L  +M   G  PD
Sbjct: 229 LCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPD 288

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VV ++ ++N   + G++D   +LL  M+ R   P+TV YN+ + G C+ GR     EL  
Sbjct: 289 VVIYSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIA 345

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            MV K C  +  +++ LIN+ C+++  E A+ +  +M      P V++YNT++S   +  
Sbjct: 346 EMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQA 405

Query: 414 NLGDALKLID--------------------------------KMQLNDVVPDSFTFATYI 441
              DALKL++                                KM   D   +  TF   I
Sbjct: 406 CADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILI 465

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           D LC+NG V +A+++F+ +   +C   I TY+ LING  + G  K A  LF  +  +   
Sbjct: 466 DSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRA-- 523

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
            D+ + +  +  LC   + D A +L+ DM  K+C+P+EVTF  L+    Q    ++ + +
Sbjct: 524 -DIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEV 582

Query: 562 LHKM 565
             +M
Sbjct: 583 YEQM 586



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 226/444 (50%), Gaps = 15/444 (3%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA      MI+    P   +F   +    +N   D  V L +++   G  PD+ + + L
Sbjct: 236 EEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTL 295

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N   + G    A  +L  +L     PNTV +N  + GLC  GR  E   L  ++    C
Sbjct: 296 VNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDC 352

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN  TF+TLIN LC+ R    A+++ E+M  ++G +  PDVV+YN+II    +    D 
Sbjct: 353 PPNDATFSTLINSLCQNRLAEYAIEVLEQM-QKYGYM--PDVVSYNTIISCFSEQACADD 409

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL  M      P+ I++N+++   C  + W +A  L  +M+      + +TFN +I+
Sbjct: 410 ALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILID 466

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C++G++     + ELM +    PD VTY+SL++GF   G    A +LF SM    CR 
Sbjct: 467 SLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSM---PCRA 523

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D++SYN  +   C   + +DA  L  +M+++   P+ +T+N L++ L Q G +  A+++ 
Sbjct: 524 DIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVY 583

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M    + PD FT+   I+G  + G + +A++    +    CE    +YN ++ GLC+ 
Sbjct: 584 EQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTM---PCEPDTISYNSILKGLCRA 640

Query: 483 GRLKTACKLFHRLQHKGPIPDVVT 506
            R K A KL   +  K   P+ VT
Sbjct: 641 ERWKDAEKLVTEMLRKNCTPNEVT 664



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 227/471 (48%), Gaps = 44/471 (9%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
            + + S  + PD +  N ++  LC       A  ++  ++R+   PN VTF   I   C 
Sbjct: 207 LRLIASMPVAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQ 266

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
            G +  A  L +++  + C P+VV ++TL+NG         ALKL   M      +C+P+
Sbjct: 267 NGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTM------LCRPN 320

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
            V YN+ + GLC  G  D+  EL+ +M  ++  PN  T+++LI   C     + A  +  
Sbjct: 321 TVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLE 380

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
           +M   G  PDVV++N +I+   +    D   +LL  M+     PDT+++N+++   C   
Sbjct: 381 QMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAE 437

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
           R   A EL   M+ + C  +  ++NILI++ C++ +V+DA+ ++  M   R  P ++TY+
Sbjct: 438 RWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYS 497

Query: 404 TLLSGLFQVG--------------------------------NLGDALKLIDKMQLNDVV 431
           +L++G  + G                                   DA +LI  M   D +
Sbjct: 498 SLINGFSEQGLDKVAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCL 557

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           P+  TF   I+ LC+ G V  A++V++ +        I TYN LING  + G L  A K 
Sbjct: 558 PNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKF 617

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
              +  +   PD ++ ++++  LC+  +   A  L+ +M  KNC P+EVTF
Sbjct: 618 LSTMPCE---PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 223/452 (49%), Gaps = 15/452 (3%)

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           LI+  C+ G  + A  ++  +      P+T T+N ++ GLC   +  EA  L +++    
Sbjct: 193 LIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNN 249

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
           C PN VTF T I   C+      A++L E+M  ++G  C PDVV Y+++++G  + G VD
Sbjct: 250 CHPNEVTFATQIRAFCQNGLLDRAVELLEQM-PKYG--CMPDVVIYSTLVNGFSEHGRVD 306

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
            A +LL  M  R   PN + YN+ + G C    W E   L  EM+     P+  TF+ +I
Sbjct: 307 DALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLI 363

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           N  C++   +    +LE M + G  PD V+YN+++  F        A +L  SM+   C+
Sbjct: 364 NSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CK 420

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D  S+N ++   C+ ++  DA  L  +ML E    + +T+N L+  L Q G + DA+++
Sbjct: 421 PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEM 480

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
            + M      PD  T+++ I+G  + G    A  +F   R+  C   I +YN  + GLC 
Sbjct: 481 FELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLF---RSMPCRADIFSYNATLKGLCM 537

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
             R   A +L   +  K  +P+ VT + +I+ LC++G +++A ++   M      P   T
Sbjct: 538 AARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFT 597

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           +  L+ G+ +       +  L  M  E   +S
Sbjct: 598 YNALINGYSEQGCLDDALKFLSTMPCEPDTIS 629



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 200/418 (47%), Gaps = 15/418 (3%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P V+T N LI  LC  R    A ++ E +     A    D V++N+++ G C+DG +  A
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGAA----DAVSHNTLVAGYCRDGSLWDA 172

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            E +L+    +   NV+TY +LI G+C      +A  L   M    V PD  T+N ++  
Sbjct: 173 -ERVLEAARASGAANVVTYTALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTVLKG 228

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C   + ++   L+  MI+   +P+ VT+ + +  FC  G + RA EL   M   GC  D
Sbjct: 229 LCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPD 288

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           V  Y+ L+N   +  +V+DA+ L   ML    RP+ + YN  L GL   G   +  +LI 
Sbjct: 289 VVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIA 345

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M   D  P+  TF+T I+ LC+N     A++V + ++       + +YN +I+   +  
Sbjct: 346 EMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQA 405

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
               A KL + +  K   PD ++ + ++  LC+  +   A +L+  M  ++C  +E+TF 
Sbjct: 406 CADDALKLLNSMLCK---PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFN 462

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            L+    QN +    + +   M   +    D+   S +++  S+    +   + FR +
Sbjct: 463 ILIDSLCQNGQVKDAIEMFELMPKYR-CTPDIVTYSSLINGFSEQGLDKVAFDLFRSM 519


>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 566

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 242/484 (50%), Gaps = 7/484 (1%)

Query: 54  RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
             KS  +   +A +  + M++    P +   T LL  L K  +    + + + +  +G+ 
Sbjct: 70  EQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGII 129

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD      L++ LC+ G    A  ++ ++    +  NTVT+N L+ GLC  G + ++ +L
Sbjct: 130 PDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQL 189

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
             +L      PN  T++ L+    + R    A KL +E++ + G   +P++V+YN ++ G
Sbjct: 190 LDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG---EPNLVSYNVLLTG 246

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LCK+G  + A  L  ++  +  +PNV++YN L+   C    W+EA  L  EM  +   P 
Sbjct: 247 LCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPS 306

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            VT+N +I      G+ +    +LE MI+    P   +YN ++   C  G++    +   
Sbjct: 307 TVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLD 366

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+ + C  +  +YN  I   C++  V++A  + + + +++   +   Y  +++ L + G
Sbjct: 367 QMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKG 425

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI-RNCKCELRIETY 472
           N   A +L+ +M      PDSFT+++ I GLC  G + EA+++F  +  N K +   E Y
Sbjct: 426 NTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPD--TENY 483

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI G CK  R   A  +F  +  KG +P+  T + ++  +  E +MD A  +L +++ 
Sbjct: 484 NSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQL 543

Query: 533 KNCV 536
           ++ +
Sbjct: 544 RDVI 547



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 218/447 (48%), Gaps = 9/447 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   + MI     P  +S+T L++ L +       + L  ++   G   +    N L+
Sbjct: 115 KAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLV 174

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC  G  + +  +L R+++    PN  T++FL+     E    EA++L  ++     +
Sbjct: 175 RGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGE 234

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN+V++N L+ GLC+   T  A++LF E+ ++  +   P+VV+YN ++  LC +G  ++A
Sbjct: 235 PNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFS---PNVVSYNILLRSLCNEGRWEEA 291

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL +M     +P+ +TYN LI         + A  +  EM+    +P   ++N +I +
Sbjct: 292 NVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAH 351

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CKDGK+D V + L+ M+ R  NP+  TYN++    C  G +  A  +  S+ +K     
Sbjct: 352 LCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHSST 410

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              Y I+I + C+      A  L  EM      P   TY++L+ GL   G L +A+++  
Sbjct: 411 QEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFS 470

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M+ N+  PD+  + + I G CK+     A+ VF+ +          TY  L+ G+    
Sbjct: 471 VMEENN-KPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEK 529

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTM 510
            +  A K+   LQ +    DV++ ST+
Sbjct: 530 EMDLATKVLRELQLR----DVISQSTL 552



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 189/378 (50%), Gaps = 9/378 (2%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN+T  +++   D +I+    P   +++ LL    K +  D    L   + + G  P+L 
Sbjct: 181 GNLT--QSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLV 238

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N+L+  LCK G T  A  +   +    F+PN V++N L+  LC EGR  EA  L  ++
Sbjct: 239 SYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM 298

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           N     P+ VT+N LI  L     T  AL++ EEM+    A  KP   +YN II  LCKD
Sbjct: 299 NGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIR---ARFKPTASSYNPIIAHLCKD 355

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G +D   + L QM  R+ NPN  TYN++     C +   +     I+ + N        F
Sbjct: 356 GKLDLVVKCLDQMMYRHCNPNEGTYNAIAT--LCEEGMVQEAFSIIQSLGNKQHSSTQEF 413

Query: 298 -NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
              +I   C+ G      +LL  M + G  PD+ TY+SL+ G C+ G ++ A E+F S++
Sbjct: 414 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF-SVM 472

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +  + D  +YN LI   CK ++ + A+ ++  M+ +   P+  TY  L+ G+     + 
Sbjct: 473 EENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMD 532

Query: 417 DALKLIDKMQLNDVVPDS 434
            A K++ ++QL DV+  S
Sbjct: 533 LATKVLRELQLRDVISQS 550



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 215/465 (46%), Gaps = 38/465 (8%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           AF  L  ++     P+      L+  LC   ++ +A ++ + +      P+  ++  L++
Sbjct: 81  AFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVS 140

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
            LCR  N   A++L ++M  E+G     + VTYNS++ GLC  G + ++ +LL ++  + 
Sbjct: 141 SLCRKGNVGYAMQLVDKM-EEYGY--PTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PN  TY+ L+          EA  L  E++  G +P++V++N ++   CK+G+ +   
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAI 257

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           RL   +  +G +P+ V+YN L+   C  GR   A  L   M          +YNILI + 
Sbjct: 258 RLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSL 317

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
               + E A+ +  EM+  R +P+  +YN +++ L + G L   +K +D+M      P+ 
Sbjct: 318 ALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNE 377

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   I  LC+ G V EA  + Q++ N +     E Y  +I  LC+ G    A +L + 
Sbjct: 378 GTYNA-IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYE 436

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKA------------------------------N 524
           +   G  PD  T S++I  LC EG +++A                               
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDTENYNSLILGCCKSRRT 496

Query: 525 DLLLD----MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           DL LD    M  K  +P+E T+  L+ G +   +      +L ++
Sbjct: 497 DLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLREL 541



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 176/364 (48%), Gaps = 1/364 (0%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           KPDV     ++  LCK   + KA +++  M    I P+  +Y  L+   C   +   A  
Sbjct: 94  KPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQ 153

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L  +M + G   + VT+N+++   C  G + +  +LL+ +IQ+G+ P+  TY+ L++   
Sbjct: 154 LVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAY 213

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                  A +L   +++KG   ++ SYN+L+   CK+ + EDA+ L+RE+ S+   P+V+
Sbjct: 214 KERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVV 273

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YN LL  L   G   +A  L+ +M  ++  P + T+   I  L  +G    A++V + +
Sbjct: 274 SYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEM 333

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
              + +    +YN +I  LCK G+L    K   ++ ++   P+  T +  I  LC+EG +
Sbjct: 334 IRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMV 392

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
            +A  ++  +  K    ++  +  ++    +         LL++M          + SS 
Sbjct: 393 QEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 452

Query: 581 VVDL 584
           +  L
Sbjct: 453 IRGL 456



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 157/311 (50%), Gaps = 15/311 (4%)

Query: 304 NCKDGKMDKVNR---------LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           N K GK+++ ++          LE M+++G  PD      L+   C   ++ +A ++   
Sbjct: 63  NWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEM 122

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M+  G   D  SY  L+++ C+   V  A+ L  +M       + +TYN+L+ GL   GN
Sbjct: 123 MIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGN 182

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L  +L+L+D++    +VP+++T++  ++   K     EA ++   I     E  + +YN 
Sbjct: 183 LTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNV 242

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L+ GLCK GR + A +LF  L  KG  P+VV+ + ++  LC EG+ ++AN LL +M    
Sbjct: 243 LLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDE 302

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR-- 592
             PS VT+  L+     + +    + +L +M   +   +  S +  ++  L KD K    
Sbjct: 303 RSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNP-IIAHLCKDGKLDLV 361

Query: 593 -ECLNQ--FRH 600
            +CL+Q  +RH
Sbjct: 362 VKCLDQMMYRH 372



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 159/316 (50%), Gaps = 9/316 (2%)

Query: 236 KDGFVD-KAKELLLQ--------MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           K G V+ K+KEL L         M ++   P+V     L+   C     ++A  +   M+
Sbjct: 65  KTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMI 124

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +G+ PD  ++  +++  C+ G +    +L++ M + G   +TVTYNSL+ G C+ G ++
Sbjct: 125 GSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLT 184

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
           ++ +L   ++ KG   + Y+Y+ L+ A  K++  ++A  L  E++++   P++++YN LL
Sbjct: 185 QSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLL 244

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           +GL + G   DA++L  ++      P+  ++   +  LC  G   EA  +   +   +  
Sbjct: 245 TGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERS 304

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
               TYN LI  L   GR + A ++   +      P   + + +I  LCK+G++D     
Sbjct: 305 PSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKC 364

Query: 527 LLDMEAKNCVPSEVTF 542
           L  M  ++C P+E T+
Sbjct: 365 LDQMMYRHCNPNEGTY 380


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 250/510 (49%), Gaps = 18/510 (3%)

Query: 67  YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG--LFPDLFVLNLLIN 124
           Y+ D   +    P +  +  LL +L+K K       + + +   G  L P+ F    ++ 
Sbjct: 184 YWADRQWRYSHHPLV--YYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAF--GCVMV 239

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
              + G    A  VL  + ++   PN    N  I  L    ++ +A R  +++ V    P
Sbjct: 240 SYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKP 299

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           ++VT+N+LI G C       AL+L   + ++    C PD V+Y +++  LCK+  +++ K
Sbjct: 300 DIVTYNSLIKGYCDLNRIEDALELIAGLPSKG---CPPDKVSYYTVMGFLCKEKKIEQVK 356

Query: 245 ELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            L+ +M +D N+ P+ +TYN+LI          +A     E  D G   D V ++A+++ 
Sbjct: 357 CLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHS 416

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G+MD+   L+  M  R  NPD VTY +++DGFC +GRI  A+++   M   GC+ +
Sbjct: 417 FCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPN 476

Query: 364 VYSYNILINANCKDQKVEDAVCLYREML--SER--IRPSVITYNTLLSGLFQVGNLGDAL 419
             SY  L+N  C   K  +A    REM+  SE     P+ ITY  ++ G  + G L +A 
Sbjct: 477 TVSYTALLNGLCHSGKSLEA----REMINVSEEHWWTPNAITYGVVMHGFRREGKLSEAC 532

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
            L  +M      P        I  LC+N  V+EA +  +   N  C + +  +  +I+G 
Sbjct: 533 DLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGF 592

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           C++G ++ A  +   +      PD VT + +   L K+G++D+A +L++ M +K   P+ 
Sbjct: 593 CQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTP 652

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
           VTF +++  + Q  +   ++ LL +M   K
Sbjct: 653 VTFRSVIHRYCQWGRVDDMLNLLDRMVKRK 682



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 235/467 (50%), Gaps = 12/467 (2%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+     M K    P ++     + +L K  + +  +   +R+   G+ PD+   N LI 
Sbjct: 250 ALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIK 309

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----NVF 180
             C +     A  ++  +      P+ V++  ++  LC E +I +   L +K+    N+ 
Sbjct: 310 GYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLI 369

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+ VT+NTLI+ L +  +   AL   +E  ++   I   D V Y++I+   C+ G +
Sbjct: 370 ---PDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHI---DKVGYSAIVHSFCQKGRM 423

Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
           D+AK L++ M  R+ NP+V+TY +++ GFC +    EAK +  +M  +G +P+ V++ A+
Sbjct: 424 DEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTAL 483

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
           +N  C  GK  +   ++ +  +    P+ +TY  +M GF   G++S A +L   MV KG 
Sbjct: 484 LNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGF 543

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
                  N+LI + C++QKV +A     E L++    +V+ + T++ G  Q+G++  AL 
Sbjct: 544 FPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALS 603

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           +++ M L++  PD+ T+    D L K G + EA ++   + +   +    T+  +I+  C
Sbjct: 604 VLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYC 663

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           + GR+     L  R+  + P   +   + +I  LC  G +++A  LL
Sbjct: 664 QWGRVDDMLNLLDRMVKRKPFRTIY--NHVIEKLCDFGNLEEAEKLL 708



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/476 (24%), Positives = 215/476 (45%), Gaps = 6/476 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A+ F + M      P + ++  L+       + +  + L   L S G  PD      +
Sbjct: 283 EKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTV 342

Query: 123 INCLCKMGITSGAFVVLGRILR-SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +  LCK         ++ ++++ S   P+ VT+N LI+ L   G   +A    K+     
Sbjct: 343 MGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKG 402

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
              + V ++ +++  C+      A  L  +M   +   C PDVVTY +I+DG C+ G +D
Sbjct: 403 FHIDKVGYSAIVHSFCQKGRMDEAKSLVIDM---YSRSCNPDVVTYTAIVDGFCRLGRID 459

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +AK++L QM      PN ++Y +L+ G C      EA+ +     ++   P+ +T+  ++
Sbjct: 460 EAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVM 519

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
           +   ++GK+ +   L   M+++G  P  V  N L+   C   ++  A++     ++KGC 
Sbjct: 520 HGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCA 579

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            +V ++  +I+  C+   +E A+ +  +M      P  +TY  L   L + G L +A +L
Sbjct: 580 INVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAEL 639

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           I KM    + P   TF + I   C+ G V + + +    R  K +     YN +I  LC 
Sbjct: 640 IVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLD--RMVKRKPFRTIYNHVIEKLCD 697

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
            G L+ A KL  ++       D  TC  ++    K+G    A  +   M  +N  P
Sbjct: 698 FGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTP 753



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 195/405 (48%), Gaps = 17/405 (4%)

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           VAL  F     ++     P  + Y +++D L K      A+ +L  M  R I  +   + 
Sbjct: 178 VALNFFYWADRQWRYSHHP--LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFG 235

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            ++  +      + A  +   M   GV+P++   N  I    K  K++K  R LE M   
Sbjct: 236 CVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVT 295

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD VTYNSL+ G+C + RI  A EL   + SKGC  D  SY  ++   CK++K+E  
Sbjct: 296 GIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQV 355

Query: 384 VCLYREMLSER-IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
            CL  +M+ +  + P  +TYNTL+  L + G+  DAL  + + +      D   ++  + 
Sbjct: 356 KCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVH 415

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
             C+ G + EA  +   + +  C   + TY  +++G C++GR+  A K+  ++   G  P
Sbjct: 416 SFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKP 475

Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           + V+ + +++ LC  G+  +A +++   E     P+ +T+  ++ GF +  K S+   L 
Sbjct: 476 NTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLT 535

Query: 563 HKMAAE---------KLVVSDLSLSSKVVDLLSKDKKY-RECLNQ 597
            +M  +          L++  L  + KVV+     KKY  ECLN+
Sbjct: 536 REMVEKGFFPTPVEINLLIQSLCQNQKVVEA----KKYLEECLNK 576



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/332 (20%), Positives = 127/332 (38%), Gaps = 71/332 (21%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA      M K    P   S+T LL  L  + +      +      +   P+     ++
Sbjct: 459 DEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVV 518

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++   + G  S A  +   ++   F P  V  N LI  LC   +++EA +  ++     C
Sbjct: 519 MHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGC 578

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             NVV F T+I+G C+  +   AL + E+M   + +   PD VTY ++ D L K G +D+
Sbjct: 579 AINVVNFTTVIHGFCQIGDMEAALSVLEDM---YLSNKHPDAVTYTALFDALGKKGRLDE 635

Query: 243 AKELLLQMKDRNINPNVIT---------------------------------YNSLICGF 269
           A EL+++M  + ++P  +T                                 YN +I   
Sbjct: 636 AAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTIYNHVIEKL 695

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK----------------------- 306
           C   + +EA+ L  +++    + D  T + ++    K                       
Sbjct: 696 CDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDL 755

Query: 307 ------------DGKMDKVNRLLELMIQRGVN 326
                       DG + + ++L+   ++RG+ 
Sbjct: 756 KLCEKVTKKLVLDGNLVEADKLMLRFVERGIQ 787


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 211/394 (53%), Gaps = 4/394 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M+    +P + ++ ILL    K + Y   + L   + + G  P+    N++I
Sbjct: 181 DALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVII 240

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + +C+ G    A  +L  +      PNTV +N ++ G C+  R ++A  +  ++    C 
Sbjct: 241 DAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCP 300

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN  T N +IN LCR +  L  + L+ E +++ G  C  +VVTYN++I G+C+ G VD A
Sbjct: 301 PNEATLNVIINTLCR-KGLLQKVTLYLEKMSKHG--CTANVVTYNAVISGMCEQGNVDSA 357

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ELL  M+     P+++TYN+++ G C  D W++A+ L I+M  N   PD  TFN +I++
Sbjct: 358 LELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISF 417

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C+ G + +   + + M ++G NP++ TY++++ G    G++ +A EL   M +KG   D
Sbjct: 418 WCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD 477

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              Y +L  +  K+ K+E+ V +  ++    I P  + YNT+L GL + G    A+ ++ 
Sbjct: 478 KM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLA 536

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            M     +PD  T+   I+GL   G+  EA ++ 
Sbjct: 537 DMVSCGCMPDESTYIILIEGLFYEGYSKEARELL 570



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 234/509 (45%), Gaps = 42/509 (8%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV-TFNFLING 160
           +  + + S+   PD+ + N L+  LC+ G  + A     R++ +C    T  T+  L++G
Sbjct: 82  AALRLVGSSPRPPDVPLANRLVRDLCRRGRPADA----ARVVEACGPEATAATYGALVDG 137

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
            C  G + +A R+   +       +    N LI+ LC       AL + + M+      C
Sbjct: 138 YCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRG---C 194

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PDVVTYN ++   CK     +A EL+  M+     PN +TYN +I   C   D  +A+ 
Sbjct: 195 APDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARE 254

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L   +   G +P+ V +N ++   C   +    + +L+ M++    P+  T N +++  C
Sbjct: 255 LLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLC 314

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
             G + +       M   GC  +V +YN +I+  C+   V+ A+ L   M S   +P ++
Sbjct: 315 RKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIV 374

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           TYNT+L GL       DA +L+ KM  ND +PD+ TF T I   C+ G +L+A +VF+ +
Sbjct: 375 TYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQM 434

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLF---------------------------- 492
               C     TY+ +I GL K G+++ A +L                             
Sbjct: 435 PEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIE 494

Query: 493 ------HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
                 H+LQ  G  P  V  +T++  LC+ G+ D A D+L DM +  C+P E T+  L+
Sbjct: 495 EVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILI 554

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
            G        +   LL ++ +  ++ + L
Sbjct: 555 EGLFYEGYSKEARELLSRLCSRDVLSNSL 583



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 179/372 (48%), Gaps = 4/372 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M      P   ++ +++  + +    D    L   L S G  P+    N ++
Sbjct: 216 QALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVL 275

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C +     A  +L  ++R    PN  T N +IN LC +G + +     +K++   C 
Sbjct: 276 KGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCT 335

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            NVVT+N +I+G+C   N   AL+L   M   FG  CKPD+VTYN+++ GLC     + A
Sbjct: 336 ANVVTYNAVISGMCEQGNVDSALELLSNM-QSFG--CKPDIVTYNTVLKGLCSADRWEDA 392

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           +EL+++M   +  P+  T+N++I  +C      +A  +F +M + G  P+  T++ +I  
Sbjct: 393 EELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGG 452

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K GKM++   LL  M  +G N D + Y  L +      +I    ++   +   G    
Sbjct: 453 LTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQ 511

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              YN ++   C++ K + A+ +  +M+S    P   TY  L+ GLF  G   +A +L+ 
Sbjct: 512 TVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLS 571

Query: 424 KMQLNDVVPDSF 435
           ++   DV+ +S 
Sbjct: 572 RLCSRDVLSNSL 583



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 3/216 (1%)

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV   N L+   C+  +  DA  +      E    +  TY  L+ G  + G L DA +++
Sbjct: 95  DVPLANRLVRDLCRRGRPADAARVVEACGPE---ATAATYGALVDGYCRAGLLEDARRVV 151

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
             M  +     ++     I  LC+ G V +A+ V   +    C   + TYN L+   CK 
Sbjct: 152 GGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKG 211

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
              + A +L   ++ +G  P+ VT + +I  +C+EG +D+A +LL  + ++ C P+ V +
Sbjct: 212 RGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNY 271

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            T+L+GF    +      +L +M  E    ++ +L+
Sbjct: 272 NTVLKGFCSIERWVDADEILDEMVRENCPPNEATLN 307



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 39/245 (15%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           + GN+ S  A+     M      P + ++  +L  L    +++    L  +++ N   PD
Sbjct: 350 EQGNVDS--ALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPD 407

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR--------- 166
               N +I+  C+ G+   AF V  ++      PN+ T++ +I GL   G+         
Sbjct: 408 NSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLN 467

Query: 167 -------------------------IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRN 201
                                    I E  ++  KL      P  V +NT++ GLCR   
Sbjct: 468 EMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGK 527

Query: 202 TLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
           T  A+ +  +MV+     C PD  TY  +I+GL  +G+  +A+ELL ++  R++  N + 
Sbjct: 528 TDYAIDVLADMVS---CGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLI 584

Query: 262 YNSLI 266
            N  +
Sbjct: 585 KNEAL 589


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 229/468 (48%), Gaps = 15/468 (3%)

Query: 75  MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSG 134
           M  +P   ++  +L  L   KQ++    L + +  N   P+       I   C+ G+   
Sbjct: 1   MPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDR 60

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           A  +L ++ +   TP+ + ++ L+NG    GR+ EA +L   LN   C PN V +N  + 
Sbjct: 61  AVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKL---LNTMLCRPNTVCYNAALK 117

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
           GLC         +L  EMV +    C P+  T++++I+ LC++  V+ A E+L QM+   
Sbjct: 118 GLCIAGRWEEVGELIAEMVRK---DCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYG 174

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             P+V++YN++I  F       +A  L   M+    +PD ++FNA++   CK  +     
Sbjct: 175 YMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAV 231

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            L+  M+++    + +T+N L+D  C  G++  A E+F  M    C  D+ +Y+ LIN  
Sbjct: 232 ELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGF 291

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            +    E A  L+R M     R  + +YN  L GL       DA +LI  M   D +P+ 
Sbjct: 292 SEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNE 348

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            TF   I  LC+ G V  A+ V++ +        I TYN LING  + GRL  A K    
Sbjct: 349 VTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLST 408

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           +  +   PD ++ ++++  LC+  +   A  L+ +M  KNC P+EVTF
Sbjct: 409 MPCE---PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 222/435 (51%), Gaps = 15/435 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI+    P   +F   +    +N   D  V L +++   G  PD+ + + L+N   + G 
Sbjct: 33  MIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGR 92

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L  +L     PNTV +N  + GLC  GR  E   L  ++    C PN  TF+T
Sbjct: 93  VDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFST 149

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LIN LC+ R    A+++ E+M  ++G +  PDVV+YN+II         D A +LL  M 
Sbjct: 150 LINSLCQNRLVEYAVEVLEQM-QKYGYM--PDVVSYNTIISCFSDQARADDALKLLKSML 206

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                P+ I++N+++   C    W +A  L  +M+    + + +TFN +I+  C++G++ 
Sbjct: 207 ---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVK 263

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
               + ELM +    PD VTY+SL++GF   G    A +LF SM    CR D++SYN  +
Sbjct: 264 DAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATL 320

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
              C   + +DA  L  +M++E   P+ +T+N L+S L Q G +  A+ + ++M    + 
Sbjct: 321 KGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGIT 380

Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           PD FT+   I+G  + G + +A++    +    CE    +YN ++ GLC+  R K A KL
Sbjct: 381 PDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKL 437

Query: 492 FHRLQHKGPIPDVVT 506
              +  K   P+ VT
Sbjct: 438 VTEMLRKNCTPNEVT 452



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 220/426 (51%), Gaps = 12/426 (2%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
            P+T T+N ++ GLC   +  +A  L +++   +C PN VTF T I   C+      A++
Sbjct: 4   APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 63

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           L E+M  ++G  C PDV+ Y+++++G  + G VD+A +LL  M  R   PN + YN+ + 
Sbjct: 64  LLEQM-PKYG--CTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALK 117

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           G C    W+E   L  EM+     P+  TF+ +IN  C++  ++    +LE M + G  P
Sbjct: 118 GLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMP 177

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           D V+YN+++  F    R   A +L  SM+   C+ D  S+N ++   CK ++  DAV L 
Sbjct: 178 DVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELV 234

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            +ML +  R + +T+N L+  L Q G + DA+++ + M     +PD  T+++ I+G  + 
Sbjct: 235 AKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQ 294

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
           G    A  +F   R+  C   I +YN  + GLC   R   A +L   +  +  +P+ VT 
Sbjct: 295 GLDEMAFDLF---RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTF 351

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
           + +I  LC++G +++A D+   M      P   T+  L+ G+ +  +    +  L  M  
Sbjct: 352 NILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPC 411

Query: 568 EKLVVS 573
           E   +S
Sbjct: 412 EPDTIS 417



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 226/452 (50%), Gaps = 15/452 (3%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           PD +  N ++  LC       A  ++  ++R+   PN VTF   I   C  G +  A  L
Sbjct: 5   PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVEL 64

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
            +++  + C P+V+ ++TL+NG         ALKL   M      +C+P+ V YN+ + G
Sbjct: 65  LEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTM------LCRPNTVCYNAALKG 118

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
           LC  G  ++  EL+ +M  ++  PN  T+++LI   C     + A  +  +M   G  PD
Sbjct: 119 LCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPD 178

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
           VV++N +I+      + D   +LL+ M+ +   PDT+++N+++   C   R   A EL  
Sbjct: 179 VVSYNTIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVA 235

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M+ K CR +  ++NILI++ C++ +V+DA+ ++  M   R  P ++TY++L++G  + G
Sbjct: 236 KMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQG 295

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
               A  L   M       D F++   + GLC      +A ++   +    C     T+N
Sbjct: 296 LDEMAFDLFRSMPCR---ADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFN 352

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            LI+ LC+ G +  A  ++ ++   G  PD+ T + +I+   ++G++D A   L  M   
Sbjct: 353 ILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP-- 410

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
            C P  +++ ++L+G  +  +      L+ +M
Sbjct: 411 -CEPDTISYNSILKGLCRAERWKDAEKLVTEM 441



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 171/375 (45%), Gaps = 67/375 (17%)

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + P+  TYN+++ G CC   W++A+ L  EM+ N   P+ VTF   I   C++G +D+  
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGF--------------------------------CLV 342
            LLE M + G  PD + Y++L++GF                                C+ 
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIA 122

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
           GR     EL   MV K C  +  +++ LIN+ C+++ VE AV +  +M      P V++Y
Sbjct: 123 GRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSY 182

Query: 403 NTLLSGLFQVGNLGDALK--------------------------------LIDKMQLNDV 430
           NT++S         DALK                                L+ KM   D 
Sbjct: 183 NTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDC 242

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
             +  TF   ID LC+NG V +A++VF+ +   +C   I TY+ LING  + G  + A  
Sbjct: 243 RINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFD 302

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           LF  +  +    D+ + +  +  LC   + D A +L+ DM  ++C+P+EVTF  L+    
Sbjct: 303 LFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLC 359

Query: 551 QNNKKSKVVVLLHKM 565
           Q    ++ + +  +M
Sbjct: 360 QKGLVNRAIDVYEQM 374



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 6/290 (2%)

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
           V PD  T+N ++   C   + ++   L+  MI+   +P+ VT+ + +  FC  G + RA 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           EL   M   GC  DV  Y+ L+N   +  +V++A+ L   ML    RP+ + YN  L GL
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLC---RPNTVCYNAALKGL 119

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
              G   +  +LI +M   D  P+  TF+T I+ LC+N  V  AV+V + ++       +
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            +YN +I+      R   A KL   +  K   PD ++ + ++  LCK  +   A +L+  
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAK 236

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
           M  K+C  +E+TF  L+    QN +    + +   M   + +   ++ SS
Sbjct: 237 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSS 286



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 9/234 (3%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +AV     M+K        +F IL+  L +N Q    + +F+ +      PD+   + LI
Sbjct: 229 DAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLI 288

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N   + G+   AF +   +   C   +  ++N  + GLC   R  +A  L   +    C 
Sbjct: 289 NGFSEQGLDEMAFDLFRSM--PC-RADIFSYNATLKGLCMAARWDDAGELIADMVTEDCL 345

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VTFN LI+ LC+      A+ ++E+M  ++G    PD+ TYN++I+G  + G +D A
Sbjct: 346 PNEVTFNILISSLCQKGLVNRAIDVYEQM-PKYGIT--PDIFTYNALINGYSEQGRLDDA 402

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
            + L  M      P+ I+YNS++ G C  + WK+A+ L  EM+     P+ VTF
Sbjct: 403 LKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 240/484 (49%), Gaps = 4/484 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   F  M      P   ++ IL+  L K    D  + +F R+   G+   ++  N LI
Sbjct: 353 EAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLI 412

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  C+      A  +L  ++     P+  +++ LI GLC +G +  A  L +++      
Sbjct: 413 NGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVS 472

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
            NV TF TLI+G C+  N   A +LF++M++   +   P+ VT+N +I+G C+ G V KA
Sbjct: 473 GNVYTFTTLISGFCKDGNMDEAARLFDKMID---SSVVPNEVTFNVMIEGYCRVGNVRKA 529

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +L  QM DR + P+  TY SLI   C      +AK    ++ +N V  +  +   ++  
Sbjct: 530 FQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYG 589

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK+G++ +   + + M  RGV  D +++  ++     +    +   LF  M  KG + D
Sbjct: 590 FCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPD 649

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              +  +I+ + K++ +  A+  + +M+++   P+V+TY  L++ L + G L  A  L +
Sbjct: 650 NVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCE 709

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M +   +P+SFT+  ++D L   G  LE  +V  A     C     T+N LI G CK G
Sbjct: 710 EMLVGRFLPNSFTYNCFLDFLANEG-ELEKAKVLHATILEGCLANTVTFNTLIKGFCKAG 768

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           +++ A  L       G  PD ++ ST+I+ LCK G ++KA  L  +M  K   P  V + 
Sbjct: 769 QIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYN 828

Query: 544 TLLR 547
            L+R
Sbjct: 829 ILIR 832



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 249/536 (46%), Gaps = 39/536 (7%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A+   D M+ +   P + S + ++  L K    D    L   L   G+ P+LF  N LI+
Sbjct: 284 ALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALID 343

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK      A  +   +      PN VT+  LI+ LC  G + +A  +F ++       
Sbjct: 344 KLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRV 403

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
            V  +N+LING C+  N   A  L  EMV +  A   P   +Y+ +I GLC+ G +  A 
Sbjct: 404 TVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLA---PSAASYSPLIAGLCRKGDLASAM 460

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
           EL  +M    ++ NV T+ +LI GFC   +  EA  LF +M+D+ V P+ VTFN MI   
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGY 520

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSL----------------------------- 335
           C+ G + K  +L + M+ RG+ PD  TY SL                             
Sbjct: 521 CRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNS 580

Query: 336 ------MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
                 M GFC  GR++    ++  M ++G + D+ S+ +++ A  K    E    L+RE
Sbjct: 581 FSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFRE 640

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M  + ++P  + +  ++    +  N+  AL   DKM  +   P+  T+   I+ LCK+G+
Sbjct: 641 MKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGY 700

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           +  A  + + +   +      TYNC ++ L   G L+ A K+ H    +G + + VT +T
Sbjct: 701 LSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNT 759

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +I   CK GQ+  A DL+ +       P  +++ T++    +    +K   L ++M
Sbjct: 760 LIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEM 815



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 228/482 (47%), Gaps = 3/482 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           + +L+  L +N +    V +   +   G+  D      L+   C+      A  +   +L
Sbjct: 233 YNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDML 292

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
              F P+  + +F+++GL   G I +A RL   L      PN+   N LI+ LC+ R   
Sbjct: 293 SLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFR 352

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A +LF  M N      +P+ VTY  +I  LCK G +D A  +  +M+++ I   V  YN
Sbjct: 353 EAERLFRGMANRG---LEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYN 409

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           SLI G+C  D++ +A+ L  EM++ G+ P   +++ +I   C+ G +     L   M + 
Sbjct: 410 SLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARN 469

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           GV+ +  T+ +L+ GFC  G +  A  LF  M+      +  ++N++I   C+   V  A
Sbjct: 470 GVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKA 529

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             LY +M+   + P   TY +L+S L        A + +D ++ N VV +SF+  T + G
Sbjct: 530 FQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYG 589

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            CK G + E   ++  +R    +L + ++  ++    K+   +    LF  ++ KG  PD
Sbjct: 590 FCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPD 649

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            V  + MI    KE  + +A +    M A  C P+ VT+  L+    ++   S   +L  
Sbjct: 650 NVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCE 709

Query: 564 KM 565
           +M
Sbjct: 710 EM 711



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 249/535 (46%), Gaps = 39/535 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EAV   + M++        ++  L+    + ++ +  + +   + S    P +   + ++
Sbjct: 248 EAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMV 307

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L K G    AF +   +      PN    N LI+ LC + R  EA RLF+ +     +
Sbjct: 308 DGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLE 367

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN VT+  LI+ LC+      AL +F+ M  E G   +  V  YNS+I+G C+     +A
Sbjct: 368 PNEVTYAILIHSLCKRGMMDDALCMFDRM-REKG--IRVTVYPYNSLINGYCQHDNFHQA 424

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           + LL +M ++ + P+  +Y+ LI G C   D   A  L  EM  NGV  +V TF  +I+ 
Sbjct: 425 RGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISG 484

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CKDG MD+  RL + MI   V P+ VT+N +++G+C VG + +A +L+  MV +G   D
Sbjct: 485 FCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPD 544

Query: 364 VYSYNILIN-----------------------------------ANCKDQKVEDAVCLYR 388
            Y+Y  LI+                                     CK+ ++ +   ++ 
Sbjct: 545 NYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWD 604

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           EM +  ++  +I++  ++    ++ +      L  +M+   V PD+      ID   K  
Sbjct: 605 EMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEE 664

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            +++A+  +  +    C   + TY  LIN LCK G L +A  L   +     +P+  T +
Sbjct: 665 NIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYN 724

Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
             + +L  EG+++KA  L   +  + C+ + VTF TL++GF +  +    + L+ 
Sbjct: 725 CFLDFLANEGELEKAKVLHATI-LEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQ 778



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 228/488 (46%), Gaps = 36/488 (7%)

Query: 87  LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
           +L  L K +Q+     LF  +       D +V    I   C++    GA  +L R+    
Sbjct: 166 ILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKG 225

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
              + V +N L+ GLC   R++EA  +   +       + VT+ TL+ G CRT    +AL
Sbjct: 226 VKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMAL 285

Query: 207 KLFEEMVN----------------------------------EFGAICKPDVVTYNSIID 232
           ++ ++M++                                  E G +  P++   N++ID
Sbjct: 286 EMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMV--PNLFACNALID 343

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
            LCKD    +A+ L   M +R + PN +TY  LI   C      +A C+F  M + G++ 
Sbjct: 344 KLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRV 403

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
            V  +N++IN  C+     +   LL  M+++G+ P   +Y+ L+ G C  G ++ A EL 
Sbjct: 404 TVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELH 463

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M   G   +VY++  LI+  CKD  +++A  L+ +M+   + P+ +T+N ++ G  +V
Sbjct: 464 REMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRV 523

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           GN+  A +L D+M    + PD++T+ + I  LC     ++A +    + N    L   + 
Sbjct: 524 GNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSL 583

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
             L+ G CK GRL     ++  ++ +G   D+++ + +++   K    +K + L  +M+ 
Sbjct: 584 TTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKE 643

Query: 533 KNCVPSEV 540
           K   P  V
Sbjct: 644 KGVKPDNV 651



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 203/438 (46%), Gaps = 48/438 (10%)

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
           F  D  V T    I   C  RN   A  L   M ++     K   V YN ++ GLC++  
Sbjct: 191 FPLDEYVYTAG--IRAYCEIRNLDGARGLLTRMESKG---VKGSAVPYNVLMYGLCRNNR 245

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN----------- 288
           V +A E+   M +R I  + +TY +L+ GFC  ++ + A    +EM D+           
Sbjct: 246 VLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMA----LEMTDDMLSLHFVPSVA 301

Query: 289 ----------------------------GVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
                                       G+ P++   NA+I+  CKD +  +  RL   M
Sbjct: 302 SCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGM 361

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
             RG+ P+ VTY  L+   C  G +  A  +F  M  KG R  VY YN LIN  C+    
Sbjct: 362 ANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNF 421

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
             A  L  EM+ + + PS  +Y+ L++GL + G+L  A++L  +M  N V  + +TF T 
Sbjct: 422 HQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTL 481

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I G CK+G + EA ++F  + +        T+N +I G C++G ++ A +L+ ++  +G 
Sbjct: 482 ISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGL 541

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            PD  T  ++I  LC      KA + + D+E    V +  +  TL+ GF +  + ++   
Sbjct: 542 TPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYH 601

Query: 561 LLHKMAAEKLVVSDLSLS 578
           +  +M A  + +  +S +
Sbjct: 602 IWDEMRARGVKLDLISFT 619



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 129/272 (47%)

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L + M+Q     D   Y + +  +C +  +  AR L   M SKG +     YN+L+   C
Sbjct: 182 LFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLC 241

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           ++ +V +AV +   M+   I    +TY TL+ G  +   L  AL++ D M     VP   
Sbjct: 242 RNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVA 301

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
           + +  +DGL K G + +A ++   +        +   N LI+ LCK  R + A +LF  +
Sbjct: 302 SCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGM 361

Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
            ++G  P+ VT + +IH LCK G MD A  +   M  K    +   + +L+ G+ Q++  
Sbjct: 362 ANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNF 421

Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            +   LL++M  + L  S  S S  +  L  K
Sbjct: 422 HQARGLLNEMVEKGLAPSAASYSPLIAGLCRK 453



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 6/276 (2%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S T L+    K  +      ++  + + G+  DL    +++    K+       V+   +
Sbjct: 582 SLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREM 641

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
                 P+ V    +I+    E  I++A   + K+    C PNVVT+  LIN LC++   
Sbjct: 642 KEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYL 701

Query: 203 LVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVIT 261
             A  L EEM V  F     P+  TYN  +D L  +G ++KAK L   + +  +  N +T
Sbjct: 702 SSAQILCEEMLVGRF----LPNSFTYNCFLDFLANEGELEKAKVLHATILEGCL-ANTVT 756

Query: 262 YNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
           +N+LI GFC     + A  L     ++G  PD ++++ +IN  CK G ++K  +L   M+
Sbjct: 757 FNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEML 816

Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
            +G+ PD V YN L+    + G   +   ++  MV+
Sbjct: 817 YKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVN 852



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 1/224 (0%)

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
           ++  DA  + R  LS  I     T + +L  L ++     A  L D+M       D + +
Sbjct: 139 RRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVY 198

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
              I   C+   +  A  +   + +   +     YN L+ GLC+  R+  A ++ + +  
Sbjct: 199 TAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVE 258

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +G + D VT  T+++  C+  +++ A ++  DM + + VPS  +   ++ G  +     K
Sbjct: 259 RGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDK 318

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              L   +  E  +V +L   + ++D L KD+++RE    FR +
Sbjct: 319 AFRLACHLG-ELGMVPNLFACNALIDKLCKDRRFREAERLFRGM 361


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 266/536 (49%), Gaps = 21/536 (3%)

Query: 65  AVYFFDCMIK---MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF--PDLFVL 119
           A++FF  +      K +P   +F +++  LA + Q D+V  L +++   G     DLF+ 
Sbjct: 59  ALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS 116

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
             +I+   ++G+   A  +  RI      P+   +N +++ L  E RI     +++ +  
Sbjct: 117 --VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR 174

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
              +PNV T+N L+  LC+      A KL  EM N+    C PD V+Y ++I  +C+ G 
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG---CCPDAVSYTTVISSMCEVGL 231

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           V + +EL          P V  YN+LI G C   D+K A  L  EM++ G+ P+V++++ 
Sbjct: 232 VKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK- 358
           +IN  C  G+++     L  M++RG +P+  T +SL+ G  L G    A +L+  M+   
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           G + +V +YN L+   C    +  AV ++  M      P++ TY +L++G  + G+L  A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           + + +KM  +   P+   +   ++ LC++    EA  + + +    C   + T+N  I G
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466

Query: 479 LCKMGRLKTACKLFHRL--QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
           LC  GRL  A K+F ++  QH+ P P++VT + ++  L K  ++++A  L  ++  +   
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCP-PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525

Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
            S  T+ TLL G          + L+ KM  +     +++++  ++    + K  R
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 255/527 (48%), Gaps = 24/527 (4%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           +  AV  F  + +    P +  +  +L  L    +   +  +++ +  +G  P++F  N+
Sbjct: 127 AERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 186

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           L+  LCK     GA  +L  +      P+ V++  +I+ +C  G + E   L ++     
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF---- 242

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            +P V  +N LINGLC+  +   A +L  EMV +      P+V++Y+++I+ LC  G ++
Sbjct: 243 -EPVVSVYNALINGLCKEHDYKGAFELMREMVEKG---ISPNVISYSTLINVLCNSGQIE 298

Query: 242 KAKELLLQMKDRNINPNVITYNSLICG-------FCCVDDWKEAKCLFIEMMDNGVQPDV 294
            A   L QM  R  +PN+ T +SL+ G       F  +D W +    F      G+QP+V
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF------GLQPNV 352

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           V +N ++   C  G + K   +   M + G +P+  TY SL++GF   G +  A  ++  
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M++ GC  +V  Y  ++ A C+  K ++A  L   M  E   PSV T+N  + GL   G 
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472

Query: 415 LGDALKLIDKM-QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
           L  A K+  +M Q +   P+  T+   +DGL K   + EA  + + I     E    TYN
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL--LLDME 531
            L++G C  G    A +L  ++   G  PD +T + +I   CK+G+ ++A  +  L+   
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCG 592

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +   P  +++  ++ G  ++N +   V+LL +M +  +V S  + S
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 221/468 (47%), Gaps = 35/468 (7%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD---------------------- 115
            P + ++ +LL  L KN + D    L   +++ G  PD                      
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237

Query: 116 --------LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRI 167
                   + V N LIN LCK     GAF ++  ++    +PN ++++ LIN LC  G+I
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297

Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
             A     ++    C PN+ T ++L+ G      T  AL L+ +M+  FG   +P+VV Y
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGL--QPNVVAY 355

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
           N+++ G C  G + KA  +   M++   +PN+ TY SLI GF        A  ++ +M+ 
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           +G  P+VV +  M+   C+  K  +   L+E+M +    P   T+N+ + G C  GR+  
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475

Query: 348 ARELFVSMVSKG-CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
           A ++F  M  +  C  ++ +YN L++   K  ++E+A  L RE+    +  S  TYNTLL
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            G    G  G AL+L+ KM ++   PD  T    I   CK G    A Q+   +   + +
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK 595

Query: 467 LR--IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
            R  + +Y  +I GLC+    +    L  R+   G +P + T S +I+
Sbjct: 596 WRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 212/459 (46%), Gaps = 13/459 (2%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFK--KLNVFACDPNVVTFNTLINGLCRTRNTLV 204
           F    +TF  +I  L  +G++     L +  KL  F C  ++  F ++I+   +      
Sbjct: 72  FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL--FISVISVYRQVGLAER 129

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           A+++F   + EFG  C P V  YN ++D L  +  +     +   MK     PNV TYN 
Sbjct: 130 AVEMFYR-IKEFG--CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 186

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+   C  +    AK L +EM + G  PD V++  +I+  C+ G + +   L E      
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF---- 242

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             P    YN+L++G C       A EL   MV KG   +V SY+ LIN  C   ++E A 
Sbjct: 243 -EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN-DVVPDSFTFATYIDG 443
               +ML     P++ T ++L+ G F  G   DAL L ++M     + P+   + T + G
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
            C +G +++AV VF  +    C   I TY  LING  K G L  A  +++++   G  P+
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           VV  + M+  LC+  +  +A  L+  M  +NC PS  TF   ++G     +      +  
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +M  +     ++   ++++D L+K  +  E     R + 
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 520



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 157/319 (49%), Gaps = 13/319 (4%)

Query: 61  TSNEAVYFFDCMIK-MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
           T+ +A+  ++ MI+     P + ++  L+     +      VS+F  +   G  P++   
Sbjct: 331 TTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTY 390

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
             LIN   K G   GA  +  ++L S   PN V +  ++  LC   +  EA  L + ++ 
Sbjct: 391 GSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK 450

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
             C P+V TFN  I GLC       A K+F +M  +    C P++VTYN ++DGL K   
Sbjct: 451 ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR--CPPNIVTYNELLDGLAKANR 508

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +++A  L  ++  R +  +  TYN+L+ G C       A  L  +MM +G  PD +T N 
Sbjct: 509 IEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNM 568

Query: 300 MINYNCKDGKMDKVNRLLELMI--QRGVNPDTVTYNSLMDGFCLVGRISRARE----LFV 353
           +I   CK GK ++  ++L+L+   +R   PD ++Y +++ G C     S  RE    L  
Sbjct: 569 IILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCR----SNCREDGVILLE 624

Query: 354 SMVSKGCRHDVYSYNILIN 372
            M+S G    + ++++LIN
Sbjct: 625 RMISAGIVPSIATWSVLIN 643


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 246/505 (48%), Gaps = 4/505 (0%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLA-KNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           EA+ FF+ M +  P P + ++ +++ +   K + ++ ++ LF+ + + G+ PD +  N  
Sbjct: 135 EALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTA 194

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I       +   A  +  ++  S  TP+ VT+N L++     G   EAA + K++    C
Sbjct: 195 ITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGC 254

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN+VT+N L++   R      A ++ + MV++     +PDV TY S++    + G V++
Sbjct: 255 LPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKG---IEPDVFTYTSLLSAYSRAGKVEQ 311

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E+  QM+  N  PN  T+N+LI       ++ E   +F +M   GV+PD+VT+N+++ 
Sbjct: 312 AMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLG 371

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              K+G   +V ++   M + G  PD  T+N L++ +   G   +A  ++  M+  GC  
Sbjct: 372 AFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTP 431

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           D+ ++N L+ A  ++ + E A  +  E+     +P+ I Y ++L      G L    +++
Sbjct: 432 DLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMV 491

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D +    V        T++    K   V EA   F A+R+        T+N +I+   K 
Sbjct: 492 DTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKK 551

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G +  A   F  L+  G  PDVVT + ++    +EG   K    L +  A    P  V++
Sbjct: 552 GMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSY 611

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAA 567
            T++  + ++ + S    + H+M +
Sbjct: 612 NTVIFSYSKHGQLSSATRIFHEMVS 636



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 222/449 (49%), Gaps = 7/449 (1%)

Query: 114 PDLFVLNLL--INCLCKMGITSGAFVVLGRILRSC-FTPNTVTFNFLINGLCAEGRIMEA 170
           P+L    LL  +  L + G  + A  V   + +S  F P+ VT   ++  L  E ++   
Sbjct: 42  PNLSSSELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTV 101

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
           +RLFK L       +V  + +LI+ L R R    AL  FE+M  E G   +P +VTYN I
Sbjct: 102 SRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQM-KEAGP--QPSLVTYNVI 158

Query: 231 IDGLCKDG-FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ID   K G   +   EL  +MK + I P+  TYN+ I         +EA  LF +M  + 
Sbjct: 159 IDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSN 218

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             PD VT+NA+++   K G  ++   +L+ M   G  P+ VTYN L+  F   G  + A 
Sbjct: 219 CTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAA 278

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           E+  SMVSKG   DV++Y  L++A  +  KVE A+ +Y +M +    P+  T+N L+   
Sbjct: 279 EMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMH 338

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            +  N  + + + + MQ   V PD  T+ + +    KNG   E ++VF+ ++    E   
Sbjct: 339 GKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDK 398

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            T+N LI    + G    A  ++  +   G  PD+ T +T++  L +EG+ + A  +L +
Sbjct: 399 ATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDE 458

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
           +   +  P+++ + ++L  +    +  K+
Sbjct: 459 LNRSSYKPNDIAYASMLHAYANGGELEKL 487



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 218/453 (48%), Gaps = 7/453 (1%)

Query: 79  PGMTSFTILLTM--LAKNKQYDTVVSLFKRLNSNGLF-PDLFVLNLLINCLCKMGITSGA 135
           P ++S  +L  M  L +  Q++  + +F  +  +  F PD   + +++  L +    +  
Sbjct: 42  PNLSSSELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTV 101

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
             +   +    +  +   +  LI+ L    +  EA   F+++      P++VT+N +I+ 
Sbjct: 102 SRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDL 161

Query: 196 LCRT-RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
             +  R+    L+LFEEM  +     +PD  TYN+ I         ++A EL  QMK  N
Sbjct: 162 YGKKGRSWENILELFEEMKAQG---IQPDEYTYNTAITACASGSLCEEATELFTQMKSSN 218

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
             P+ +TYN+L+  +     + EA  +  EM   G  P++VT+N +++   + G  +   
Sbjct: 219 CTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAA 278

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
            + + M+ +G+ PD  TY SL+  +   G++ +A E++  M +  C  + +++N LI  +
Sbjct: 279 EMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMH 338

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
            K++   + + ++ +M +  + P ++T+N+LL    + G   + LK+   M+     PD 
Sbjct: 339 GKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDK 398

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            TF   I+   + G   +A+ ++  +    C   + T+N L+  L + GR + A  +   
Sbjct: 399 ATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDE 458

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           L      P+ +  ++M+H     G+++K  +++
Sbjct: 459 LNRSSYKPNDIAYASMLHAYANGGELEKLKEMV 491



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 196/426 (46%), Gaps = 7/426 (1%)

Query: 157 LINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
           ++ GL  EG+  +A  +F  +       P+ VT   ++  L R        +LF+ +  E
Sbjct: 52  IMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREE 111

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVD-D 274
              +   DV  Y S+I  L ++    +A     QMK+    P+++TYN +I  +      
Sbjct: 112 GYPL---DVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRS 168

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM-DKVNRLLELMIQRGVNPDTVTYN 333
           W+    LF EM   G+QPD  T+N  I   C  G + ++   L   M      PD VTYN
Sbjct: 169 WENILELFEEMKAQGIQPDEYTYNTAIT-ACASGSLCEEATELFTQMKSSNCTPDRVTYN 227

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           +L+D +   G  + A  +   M S GC  ++ +YN L++A  +      A  +   M+S+
Sbjct: 228 ALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSK 287

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            I P V TY +LLS   + G +  A+++ ++M+ ++  P+SFTF   I    KN    E 
Sbjct: 288 GIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEM 347

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
           + +F+ ++ C  E  I T+N L+    K G      K+F  ++  G  PD  T + +I  
Sbjct: 348 MVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEA 407

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
             + G  D+A  +   M    C P   TF TLL    +  +     ++L ++       +
Sbjct: 408 YGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPN 467

Query: 574 DLSLSS 579
           D++ +S
Sbjct: 468 DIAYAS 473



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 189/413 (45%), Gaps = 5/413 (1%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
            L+   ++G +   +A+  ++ M     +P   +F  L+ M  KNK +  ++ +F+ + +
Sbjct: 299 LLSAYSRAGKV--EQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQA 356

Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
            G+ PD+   N L+    K G+ S    V   + ++ F P+  TFN LI      G   +
Sbjct: 357 CGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQ 416

Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           A  ++  +    C P++ TFNTL+  L R      A  + +E+     +  KP+ + Y S
Sbjct: 417 ALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNR---SSYKPNDIAYAS 473

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
           ++      G ++K KE++  +    +    I   + +  +       EA+  F+ M  +G
Sbjct: 474 MLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHG 533

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
              D  TFNAMI+   K G MDK      L+   G+ PD VTYN LM  +   G   +  
Sbjct: 534 YLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCE 593

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
                 ++ G   D+ SYN +I +  K  ++  A  ++ EM+S  I+P   TYNT +   
Sbjct: 594 ATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCY 653

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
              G   +AL ++  M      PD  T+ T +D  CK G   E  ++ + I++
Sbjct: 654 VNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKS 706



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/508 (20%), Positives = 210/508 (41%), Gaps = 73/508 (14%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            EA   F  M     +P   ++  LL +  K   Y+   ++ K + S G  P++   N L
Sbjct: 205 EEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNEL 264

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++   + G+ + A  +   ++     P+  T+  L++     G++ +A  ++ ++    C
Sbjct: 265 LSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNC 324

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN  TFN LI    + +N    + +FE+M        +PD+VT+NS++    K+G   +
Sbjct: 325 TPNSFTFNALIGMHGKNKNFSEMMVIFEDMQ---ACGVEPDIVTWNSLLGAFGKNGMYSE 381

Query: 243 AKELLLQMKDRNINPNVITYNSLI-----CGFC--------------CVDD--------- 274
             ++   MK     P+  T+N LI     CG                C  D         
Sbjct: 382 VLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLA 441

Query: 275 -------WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE--------- 318
                  W+ A+ +  E+  +  +P+ + + +M++     G+++K+  +++         
Sbjct: 442 ALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPF 501

Query: 319 --------------------------LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
                                      M   G   DT T+N+++  +   G + +A + F
Sbjct: 502 TKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTF 561

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             + S G   DV +YN L+    ++          RE ++    P +++YNT++    + 
Sbjct: 562 ALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKH 621

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G L  A ++  +M  N + PDSFT+ T++      G   EA+ V + +    C+    TY
Sbjct: 622 GQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTY 681

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGP 500
             L++  CK+G+ +   ++   ++   P
Sbjct: 682 RTLVDAYCKIGKFEEVERILKFIKSSDP 709



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 174/379 (45%), Gaps = 8/379 (2%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +E +  F+ M      P + ++  LL    KN  Y  V+ +F+ +   G  PD    N+L
Sbjct: 345 SEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNIL 404

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I    + G +  A  +   +L++  TP+  TFN L+  L  EGR   A  +  +LN  + 
Sbjct: 405 IEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSY 464

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP-DVVTYNSIIDGLCKDGFVD 241
            PN + + ++++           L+  +EMV+    I  P   +   + +    K   VD
Sbjct: 465 KPNDIAYASMLHAYANGGE----LEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVD 520

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A++  L M+      +  T+N++I  +       +A   F  +   G++PDVVT+N ++
Sbjct: 521 EAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLM 580

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
               ++G   K    L   +  G  PD V+YN+++  +   G++S A  +F  MVS G +
Sbjct: 581 GMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQ 640

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D ++YN  +          +A+ + + M     +P  +TY TL+    ++G   +  ++
Sbjct: 641 PDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERI 700

Query: 422 IDKMQLNDVVPDSFTFATY 440
           +  ++ +D    +F+ A Y
Sbjct: 701 LKFIKSSD---PNFSKAAY 716



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 159/340 (46%), Gaps = 3/340 (0%)

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
           S++ G      W +A  +F  M  +   +PD VT   M+    ++ ++  V+RL + + +
Sbjct: 51  SIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLRE 110

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN-ANCKDQKVE 381
            G   D   Y SL+       +   A   F  M   G +  + +YN++I+    K +  E
Sbjct: 111 EGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE 170

Query: 382 DAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYI 441
           + + L+ EM ++ I+P   TYNT ++         +A +L  +M+ ++  PD  T+   +
Sbjct: 171 NILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALL 230

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           D   K G+  EA  V + + +  C   I TYN L++   + G    A ++   +  KG  
Sbjct: 231 DVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIE 290

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           PDV T ++++    + G++++A ++   M   NC P+  TF  L+    +N   S+++V+
Sbjct: 291 PDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVI 350

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              M A   V  D+   + ++    K+  Y E L  FR +
Sbjct: 351 FEDMQACG-VEPDIVTWNSLLGAFGKNGMYSEVLKVFRGM 389



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 127/311 (40%), Gaps = 40/311 (12%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           +S++A+  +D M++   +P + +F  LL  LA+  +++    +   LN +   P+     
Sbjct: 413 SSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYA 472

Query: 121 LLINCLCKMG----------ITSGAFVVLGRILRSCFT---------------------- 148
            +++     G               +V   +IL   F                       
Sbjct: 473 SMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHH 532

Query: 149 ---PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
               +T TFN +I+    +G + +A   F  L     +P+VVT+N L+    R       
Sbjct: 533 GYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREG----M 588

Query: 206 LKLFEEMVNE-FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
            +  E  + E   A   PD+V+YN++I    K G +  A  +  +M    I P+  TYN+
Sbjct: 589 YRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNT 648

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
            +  +     + EA  +   M   G +PD VT+  +++  CK GK ++V R+L+ +    
Sbjct: 649 FVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSD 708

Query: 325 VNPDTVTYNSL 335
            N     Y  +
Sbjct: 709 PNFSKAAYRRI 719


>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 458

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/292 (38%), Positives = 178/292 (60%), Gaps = 9/292 (3%)

Query: 158 INGLCAEGRIMEAARLFKKLNVF-ACDPNVVTFNTLINGLCRTR-NTLVALKLFEEMVNE 215
           I G+C  G I  A     K+ V    D +  ++ TLINGLC+   +T  AL+L  +    
Sbjct: 111 IKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAALQLLRQAF-- 168

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                +PDVV Y ++ID +CKD FV+ A +L  +M    I+PNV+TY +LI GFC V   
Sbjct: 169 -----EPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKL 223

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           +EA  LF +M+   + P+V TFN +++  CK+GK+++   +L  M+++ +  D V Y+SL
Sbjct: 224 EEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSL 283

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           M+G+CLV  + +A+ +F +M  +   +DV SYNI+IN  CK + V++A+ L+ EM  ++I
Sbjct: 284 MNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQI 343

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
            P V+TY+TL+ GL + G L  A++L+D+M      P+  T+   +D LCKN
Sbjct: 344 FPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKN 395



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 159/275 (57%), Gaps = 6/275 (2%)

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
           +K + + G   D +    LIN LCK+G  + A +   ++LR  F P+ V +  +I+ +C 
Sbjct: 128 YKVVVARGFDVDHYSYGTLINGLCKVGGDTRAAL---QLLRQAFEPDVVMYTTVIDNMCK 184

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           +  + +A  L+ ++      PNVVT+  LI+G C       AL LF++M++E      P+
Sbjct: 185 DTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISEN---INPN 241

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           V T+N ++D  CK+G +++AK +L  M ++++  +V+ Y+SL+ G+C V++  +A+ +F 
Sbjct: 242 VYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFK 301

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
            M +  +  DV ++N MIN  CK   +D+  +L E M  + + PD VTY++L+DG C  G
Sbjct: 302 TMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSG 361

Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
           R+S A EL   M  +G   ++ +Y  +++  CK+ 
Sbjct: 362 RLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKNH 396



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 151/289 (52%), Gaps = 4/289 (1%)

Query: 266 ICGFCCVDDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           I G C   D + A     +++   G   D  ++  +IN  CK G      R    ++++ 
Sbjct: 111 IKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGD---TRAALQLLRQA 167

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD V Y +++D  C    ++ A +L+  MV+ G   +V +Y  LI+  C   K+E+A+
Sbjct: 168 FEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEAL 227

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L+++M+SE I P+V T+N L+    + G + +A  +++ M   D+  D   +++ ++G 
Sbjct: 228 GLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGY 287

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
           C    V +A  +F+ +   +    + +YN +IN  CKM  +  A KLF  +  K   PDV
Sbjct: 288 CLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDV 347

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
           VT  T+I  LCK G++  A +L+ +M+ +   P+ +T+C ++    +N+
Sbjct: 348 VTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKNH 396



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 3/208 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   +  M+    SP + ++T L+       + +  + LFK++ S  + P+++  N L
Sbjct: 189 NDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGL 248

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++  CK G    A  VL  ++      + V ++ L+NG C    + +A  +FK +     
Sbjct: 249 VDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAEREL 308

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             +V ++N +IN  C+ +    A+KLFEEM      I  PDVVTY+++IDGLCK G +  
Sbjct: 309 SYDVRSYNIMINEFCKMKMVDEAIKLFEEM--PLKQIF-PDVVTYHTLIDGLCKSGRLSY 365

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFC 270
           A EL+ +M DR   PN+ITY  ++   C
Sbjct: 366 AMELVDEMDDRGEPPNIITYCPIVDVLC 393



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 118/236 (50%), Gaps = 3/236 (1%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           +++    P +  +T ++  + K+   +    L+  + ++G+ P++     LI+  C +G 
Sbjct: 163 LLRQAFEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGK 222

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +  +++     PN  TFN L++  C EG+I EA  +   +       +VV +++
Sbjct: 223 LEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSS 282

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+NG C       A  +F+ M     +    DV +YN +I+  CK   VD+A +L  +M 
Sbjct: 283 LMNGYCLVNEVFKAQSIFKTMAERELSY---DVRSYNIMINEFCKMKMVDEAIKLFEEMP 339

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            + I P+V+TY++LI G C       A  L  EM D G  P+++T+  +++  CK+
Sbjct: 340 LKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKN 395



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 39/266 (14%)

Query: 336 MDGFCLVGRISRAREL-FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           + G C  G I RA    +  +V++G   D YSY  LIN  CK      A     ++L + 
Sbjct: 111 IKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAAL---QLLRQA 167

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
             P V+ Y T++  + +   + DA  L  +M  + + P+  T+   IDG C  G + EA+
Sbjct: 168 FEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEAL 227

Query: 455 QVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST----- 509
            +F+ + +      + T+N L++  CK G+++ A  + + +  K    DVV  S+     
Sbjct: 228 GLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGY 287

Query: 510 ------------------------------MIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
                                         MI+  CK   +D+A  L  +M  K   P  
Sbjct: 288 CLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDV 347

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKM 565
           VT+ TL+ G  ++ + S  + L+ +M
Sbjct: 348 VTYHTLIDGLCKSGRLSYAMELVDEM 373



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 12/228 (5%)

Query: 349 RELFVSMVSKGCRHDVYSYNIL--INANCKDQKVEDAVCL-YREMLSERIRPSVITYNTL 405
           R L  S V   C++ + +  +   I   C+   ++ A+   Y+ +++        +Y TL
Sbjct: 87  RVLLHSFVKIICQYYIIAPPLTTPIKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTL 146

Query: 406 LSGLFQVGNLGD---ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           ++GL +VG  GD   AL+L+ +       PD   + T ID +CK+ FV +A  ++  +  
Sbjct: 147 INGLCKVG--GDTRAALQLLRQA----FEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVA 200

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
                 + TY  LI+G C +G+L+ A  LF ++  +   P+V T + ++   CKEG++++
Sbjct: 201 SGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEE 260

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           A ++L  M  K+     V + +L+ G+   N+  K   +   MA  +L
Sbjct: 261 AKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAEREL 308



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 56/104 (53%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
           S+FK +    L  D+   N++IN  CKM +   A  +   +      P+ VT++ LI+GL
Sbjct: 298 SIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGL 357

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
           C  GR+  A  L  +++     PN++T+  +++ LC+  + +++
Sbjct: 358 CKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKNHDGVLS 401


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 234/494 (47%), Gaps = 9/494 (1%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           +P +++   LL +L +  +      +F  + + G  P L + N +I   C  G+      
Sbjct: 172 TPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLG 231

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
           +LG + R    P+  ++N LI G    G+  +A +L  ++    C P VVT+N L+N LC
Sbjct: 232 LLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLC 291

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
              N + A +LF+EMV       + + +T+N ++DG  K G +D+A     +MK R + P
Sbjct: 292 HDGNMVDARRLFDEMVK---VGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVP 348

Query: 258 NVITYNSLICG---FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           +  T+N L  G   F         +    EM  + +  D V  + ++   C DG++D   
Sbjct: 349 DCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSV--DMVVCRLCWDGRLDDAW 406

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           +L+   I++GV      +N+L+  +   G   +A E++  M   G      ++N LI   
Sbjct: 407 KLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGL 466

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
           C   +++DA  L   M+ +       ++   +   F+ GN+  ALK  D M    V PD 
Sbjct: 467 CNQGRLDDAQLLLEHMICKGYCVGT-SFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDF 525

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
             F+ YI GLC+   V EA Q F  +          TYN LI+  C++G +  A KL  +
Sbjct: 526 IAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKK 585

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           ++  G IPDV T + +I   CKEG++D  N   LDM      P  VT+ T++  +     
Sbjct: 586 MRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQD 645

Query: 555 KSKVVVLLHKMAAE 568
            S  ++ ++KM A+
Sbjct: 646 MSSAMIFMNKMLAD 659



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 183/359 (50%), Gaps = 9/359 (2%)

Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
            N L+    K G    A  V   + +    P++ TFN+LI GLC +GR+ +A  L + + 
Sbjct: 424 FNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHM- 482

Query: 179 VFACDPNVV--TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
              C    V  +F   ++   R+ N   ALK +++MV       +PD + +++ I GLC+
Sbjct: 483 --ICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVK---VGVQPDFIAFSAYISGLCR 537

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              V++A +  ++M  R   PN ITYNSLI  FC V    EA  L  +M  +G+ PDV T
Sbjct: 538 LDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFT 597

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
            N +I+  CK+G++D +N+    M   G+ PD VTYN++++ +C    +S A      M+
Sbjct: 598 SNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKML 657

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
           + GC  D+++YNI +++ C +  +  AV +  E+++    P+ +TYNTL+ G+     L 
Sbjct: 658 ADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICS-DVLD 716

Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            A+ L  K+      P++ T   +    CK GF   A+   + ++         T N L
Sbjct: 717 RAMILTGKLIKMAFQPNTVTVNVFFSHFCKQGFGKRALVWAEKLKEDSVAFDDATMNIL 775



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 216/514 (42%), Gaps = 68/514 (13%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M +    P   S+ IL+   +   Q      L   +  +G  P +   N+L+N LC  G 
Sbjct: 236 MWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGN 295

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   +++     NT+TFN L++G    GR+ EA    +++      P+  TFN 
Sbjct: 296 MVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNI 355

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPD---------------------------- 223
           L  G  +    +      +E+   FG+    D                            
Sbjct: 356 LSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQ 415

Query: 224 -----VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEA 278
                V  +N+++    K+GF ++A E+   M    + P+  T+N LI G C      +A
Sbjct: 416 GVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDA 475

Query: 279 KCLFIEM--------------MDN--------------------GVQPDVVTFNAMINYN 304
           + L   M              MD+                    GVQPD + F+A I+  
Sbjct: 476 QLLLEHMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGL 535

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C+   +++  +    M  RG  P+ +TYNSL+  FC VG +S A +L   M   G   DV
Sbjct: 536 CRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDV 595

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
           ++ NILI+  CK+ +++     + +M +  + P V+TYNT+++      ++  A+  ++K
Sbjct: 596 FTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNK 655

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M  +   PD FT+  ++  LC N  +  AV++   +    C     TYN L++G+C    
Sbjct: 656 MLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICS-DV 714

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
           L  A  L  +L      P+ VT +      CK+G
Sbjct: 715 LDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQG 748



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 218/476 (45%), Gaps = 10/476 (2%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
            L L ++     G+ S A VVL  I     TP+      L+  L   G +  A ++F ++
Sbjct: 142 ALRLALHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEM 201

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P++  FN +I G C      + L L   M   F  I  PD  +YN +I G    
Sbjct: 202 TARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMW-RFNVI--PDACSYNILIKGYSVF 258

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G    A +LL +M++    P V+TYN L+   C   +  +A+ LF EM+  G++ + +TF
Sbjct: 259 GQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITF 318

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR---ISRARELFVS 354
           N +++   K G+MD+       M  RG+ PD  T+N L  G    G+   ++  ++    
Sbjct: 319 NVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHE 378

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M   G R    S ++++   C D +++DA  L    + + +  SV  +N L++   + G 
Sbjct: 379 MF--GSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGF 436

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
              AL++   M    +VP S TF   I GLC  G  L+  Q+      CK      ++  
Sbjct: 437 DEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQG-RLDDAQLLLEHMICKGYCVGTSFTI 495

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
            ++   + G ++ A K +  +   G  PD +  S  I  LC+   +++A    ++M  + 
Sbjct: 496 YMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRG 555

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
            VP+ +T+ +L+  F +    S+ + L  KM    L + D+  S+ ++D   K+ +
Sbjct: 556 FVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGL-IPDVFTSNILIDGFCKEGR 610



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/532 (24%), Positives = 220/532 (41%), Gaps = 77/532 (14%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A    D M +    P + ++ IL+ +L  +        LF  +   G+  +    N+
Sbjct: 261 AGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNV 320

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING--------------------- 160
           L++   K G    A+     +      P+  TFN L  G                     
Sbjct: 321 LVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMF 380

Query: 161 ---------------LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
                          LC +GR+ +A +L           +V  FN L+    +      A
Sbjct: 381 GSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQA 440

Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM--------------- 250
           L+++  M N+ G +  P   T+N +I GLC  G +D A+ LL  M               
Sbjct: 441 LEVYSVM-NKIGLV--PSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGTSFTIYM 497

Query: 251 ----KDRN---------------INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
               +  N               + P+ I +++ I G C +D   EA   F+EM   G  
Sbjct: 498 DSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFV 557

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           P+ +T+N++I+  C+ G + +  +L + M Q G+ PD  T N L+DGFC  GR+    + 
Sbjct: 558 PNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKR 617

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F+ M + G   DV +YN +INA C  Q +  A+    +ML++   P + TYN  +  L  
Sbjct: 618 FLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCN 677

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-IRNCKCELRIE 470
              L  A+K++D++     +P+S T+ T +DG+C +  VL+   +    +     +    
Sbjct: 678 NHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSD--VLDRAMILTGKLIKMAFQPNTV 735

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
           T N   +  CK G  K A     +L+      D  T + ++ W  KE + D 
Sbjct: 736 TVNVFFSHFCKQGFGKRALVWAEKLKEDSVAFDDATMN-ILDWAYKEMEDDS 786



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 142/292 (48%), Gaps = 6/292 (2%)

Query: 44  GTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSL 103
           GTS   +++   +SGN+    A+  +D M+K+   P   +F+  ++ L +    +     
Sbjct: 490 GTSFTIYMDSYFRSGNVEG--ALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQA 547

Query: 104 FKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
           F  +   G  P+    N LI+  C++G  S A  +  ++ +S   P+  T N LI+G C 
Sbjct: 548 FVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCK 607

Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPD 223
           EGR+    + F  +      P+VVT+NT+IN  C  ++   A+    +M+ +    C+PD
Sbjct: 608 EGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADG---CEPD 664

Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
           + TYN  +  LC +  +++A ++L ++      PN +TYN+L+ G C  D    A  L  
Sbjct: 665 IFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICS-DVLDRAMILTG 723

Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           +++    QP+ VT N   ++ CK G   +     E + +  V  D  T N L
Sbjct: 724 KLIKMAFQPNTVTVNVFFSHFCKQGFGKRALVWAEKLKEDSVAFDDATMNIL 775


>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 241/482 (50%), Gaps = 5/482 (1%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
            KS  +  N+A +  + M++    P +   T LL  L K  +    + + + +  +G+ P
Sbjct: 71  QKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIP 130

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D      L++ LC+ G    A  ++ ++    +  NT T+N L+ GLC  G + ++ +L 
Sbjct: 131 DAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLL 190

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            +L      PN  T++ L+    + R    A KL +E++ + G   KP++V+YN ++ GL
Sbjct: 191 DRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG---KPNLVSYNVLLTGL 247

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK+G  + A +L  ++  +  +PNV++YN L+   C    W+EA  L  EM  +   P  
Sbjct: 248 CKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPST 307

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           VT+N +I      G+ +    +LE MI+    P   +YN ++   C   ++    +    
Sbjct: 308 VTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQ 367

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M+ + C  +  +YN  I   C++  V++A  + + + +++   +   Y  +++ L + GN
Sbjct: 368 MMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGN 426

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
              A +L+ +M      PDSFT+++ I GLC  G + EA+++F  +     +L  E YN 
Sbjct: 427 TYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNS 485

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI G CK  R   A  +F  +  KG + +  T + ++  +  E +MD A ++L +++ ++
Sbjct: 486 LILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRD 545

Query: 535 CV 536
            +
Sbjct: 546 VI 547



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 187/378 (49%), Gaps = 9/378 (2%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN+T  +++   D +I+    P   +++ LL    K +  D    L   + + G  P+L 
Sbjct: 181 GNLT--QSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLV 238

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N+L+  LCK G T  A  +   +    F+PN V++N L+  LC EGR  EA  L  ++
Sbjct: 239 SYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM 298

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           +     P+ VT+N LI  L     T  AL++ EEM+    A  KP   +YN II  LCKD
Sbjct: 299 DGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIR---ARFKPTASSYNPIIARLCKD 355

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             VD   + L QM  R+ NPN  TYN++     C +   +     I+ + N        F
Sbjct: 356 RKVDLVVKCLDQMMYRHCNPNEGTYNAIAT--LCEEGMVQEAFSIIQSLGNKQHFSTQEF 413

Query: 298 -NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
              +I   C+ G      +LL  M + G  PD+ TY+SL+ G C+ G ++ A E+F S++
Sbjct: 414 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF-SVM 472

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +  + D  +YN LI   CK ++ + A+ ++  M+ +    +  TY  L+ G+     + 
Sbjct: 473 EENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMD 532

Query: 417 DALKLIDKMQLNDVVPDS 434
            A +++ ++QL DV+  S
Sbjct: 533 LATEVLRELQLRDVINQS 550



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 175/364 (48%), Gaps = 1/364 (0%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           KPDV     ++  LCK   + KA +++  M    I P+  +Y  L+   C   +   A  
Sbjct: 94  KPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQ 153

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L  +M + G   +  T+N+++   C  G + +  +LL+ +IQ+G+ P+  TY+ L++   
Sbjct: 154 LVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAY 213

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                  A +L   +++KG + ++ SYN+L+   CK+ + EDA+ L+RE+ S+   P+V+
Sbjct: 214 KERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVV 273

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YN LL  L   G   +A  L+ +M  ++  P + T+   I  L  +G    A++V + +
Sbjct: 274 SYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEM 333

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
              + +    +YN +I  LCK  ++    K   ++ ++   P+  T +  I  LC+EG +
Sbjct: 334 IRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMV 392

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
            +A  ++  +  K    ++  +  ++    +         LL++M          + SS 
Sbjct: 393 QEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 452

Query: 581 VVDL 584
           +  L
Sbjct: 453 IRGL 456



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 154/310 (49%), Gaps = 8/310 (2%)

Query: 241 DKAKELLLQ--------MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
            K+KEL L         M ++   P+V     L+   C     ++A  +   M+ +G+ P
Sbjct: 71  QKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIP 130

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D  ++  +++  C+ G +    +L++ M + G   +T TYNSL+ G C+ G ++++ +L 
Sbjct: 131 DAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLL 190

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             ++ KG   + Y+Y+ L+ A  K++  ++A  L  E++++  +P++++YN LL+GL + 
Sbjct: 191 DRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKE 250

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G   DA++L  ++      P+  ++   +  LC  G   EA  +   +   +      TY
Sbjct: 251 GRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTY 310

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI  L   GR + A ++   +      P   + + +I  LCK+ ++D     L  M  
Sbjct: 311 NILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMY 370

Query: 533 KNCVPSEVTF 542
           ++C P+E T+
Sbjct: 371 RHCNPNEGTY 380



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 97/198 (48%)

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           ++   K+ ++ DA      M+ +  +P V     LL  L +   +  A+K+++ M  + +
Sbjct: 69  LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +PD+ ++   +  LC+ G V  A+Q+   +          TYN L+ GLC  G L  + +
Sbjct: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L  RL  KG +P+  T S ++    KE   D+A+ LL ++ AK   P+ V++  LL G  
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC 248

Query: 551 QNNKKSKVVVLLHKMAAE 568
           +  +    + L  ++ ++
Sbjct: 249 KEGRTEDAMQLFRELPSK 266


>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 241/482 (50%), Gaps = 5/482 (1%)

Query: 55  HKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFP 114
            KS  +  N+A +  + M++    P +   T LL  L K  +    + + + +  +G+ P
Sbjct: 71  QKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIP 130

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D      L++ LC+ G    A  ++ ++    +  NT T+N L+ GLC  G + ++ +L 
Sbjct: 131 DAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLL 190

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            +L      PN  T++ L+    + R    A KL +E++ + G   KP++V+YN ++ GL
Sbjct: 191 DRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG---KPNLVSYNVLLTGL 247

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK+G  + A +L  ++  +  +PNV++YN L+   C    W+EA  L  EM  +   P  
Sbjct: 248 CKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPST 307

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           VT+N +I      G+ +    +LE MI+    P   +YN ++   C   ++    +    
Sbjct: 308 VTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQ 367

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M+ + C  +  +YN  I   C++  V++A  + + + +++   +   Y  +++ L + GN
Sbjct: 368 MMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGN 426

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
              A +L+ +M      PDSFT+++ I GLC  G + EA+++F  +     +L  E YN 
Sbjct: 427 TYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNS 485

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           LI G CK  R   A  +F  +  KG + +  T + ++  +  E +MD A ++L +++ ++
Sbjct: 486 LILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRD 545

Query: 535 CV 536
            +
Sbjct: 546 VI 547



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 187/378 (49%), Gaps = 9/378 (2%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           GN+T  +++   D +I+    P   +++ LL    K +  D    L   + + G  P+L 
Sbjct: 181 GNLT--QSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLV 238

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
             N+L+  LCK G T  A  +   +    F+PN V++N L+  LC EGR  EA  L  ++
Sbjct: 239 SYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM 298

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
           +     P+ VT+N LI  L     T  AL++ EEM+    A  KP   +YN II  LCKD
Sbjct: 299 DGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIR---ARFKPTASSYNPIIARLCKD 355

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
             VD   + L QM  R+ NPN  TYN++     C +   +     I+ + N        F
Sbjct: 356 RKVDLVVKCLDQMMYRHCNPNEGTYNAIAT--LCEEGMVQEAFSIIQSLGNKQHFSTQEF 413

Query: 298 -NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
              +I   C+ G      +LL  M + G  PD+ TY+SL+ G C+ G ++ A E+F S++
Sbjct: 414 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF-SVM 472

Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
            +  + D  +YN LI   CK ++ + A+ ++  M+ +    +  TY  L+ G+     + 
Sbjct: 473 EENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMD 532

Query: 417 DALKLIDKMQLNDVVPDS 434
            A +++ ++QL DV+  S
Sbjct: 533 LATEVLRELQLRDVINQS 550



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 175/364 (48%), Gaps = 1/364 (0%)

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
           KPDV     ++  LCK   + KA +++  M    I P+  +Y  L+   C   +   A  
Sbjct: 94  KPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQ 153

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           L  +M + G   +  T+N+++   C  G + +  +LL+ +IQ+G+ P+  TY+ L++   
Sbjct: 154 LVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAY 213

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                  A +L   +++KG + ++ SYN+L+   CK+ + EDA+ L+RE+ S+   P+V+
Sbjct: 214 KERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVV 273

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           +YN LL  L   G   +A  L+ +M  ++  P + T+   I  L  +G    A++V + +
Sbjct: 274 SYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEM 333

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
              + +    +YN +I  LCK  ++    K   ++ ++   P+  T +  I  LC+EG +
Sbjct: 334 IRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMV 392

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
            +A  ++  +  K    ++  +  ++    +         LL++M          + SS 
Sbjct: 393 QEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 452

Query: 581 VVDL 584
           +  L
Sbjct: 453 IRGL 456



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 154/310 (49%), Gaps = 8/310 (2%)

Query: 241 DKAKELLLQ--------MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
            K+KEL L         M ++   P+V     L+   C     ++A  +   M+ +G+ P
Sbjct: 71  QKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIP 130

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           D  ++  +++  C+ G +    +L++ M + G   +T TYNSL+ G C+ G ++++ +L 
Sbjct: 131 DAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLL 190

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             ++ KG   + Y+Y+ L+ A  K++  ++A  L  E++++  +P++++YN LL+GL + 
Sbjct: 191 DRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKE 250

Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
           G   DA++L  ++      P+  ++   +  LC  G   EA  +   +   +      TY
Sbjct: 251 GRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTY 310

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N LI  L   GR + A ++   +      P   + + +I  LCK+ ++D     L  M  
Sbjct: 311 NILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMY 370

Query: 533 KNCVPSEVTF 542
           ++C P+E T+
Sbjct: 371 RHCNPNEGTY 380



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 97/198 (48%)

Query: 371 INANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDV 430
           ++   K+ ++ DA      M+ +  +P V     LL  L +   +  A+K+++ M  + +
Sbjct: 69  LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128

Query: 431 VPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACK 490
           +PD+ ++   +  LC+ G V  A+Q+   +          TYN L+ GLC  G L  + +
Sbjct: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188

Query: 491 LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           L  RL  KG +P+  T S ++    KE   D+A+ LL ++ AK   P+ V++  LL G  
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC 248

Query: 551 QNNKKSKVVVLLHKMAAE 568
           +  +    + L  ++ ++
Sbjct: 249 KEGRTEDAMQLFRELPSK 266


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 263/554 (47%), Gaps = 21/554 (3%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           L +H     + IA ++    K+G I  ++AV  FD M +         +   + +L  + 
Sbjct: 5   LGAHRLIYRSRIAGYV----KAGLI--DKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHS 58

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFT----PNT 151
           ++D     + ++ + G     F  +  I  LCK+      F  +  +L    T    P+ 
Sbjct: 59  RFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVK----NFTFIDELLHDMETLNCLPDI 114

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
             FN  ++ L  EGRI  A  +F+K+      P+VVT+  +I+G+C+ +    A++ + +
Sbjct: 115 WAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRD 174

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ-MKDRNINPNVITYNSLICGFC 270
           M+++  +   PD     +I+ GLC    VD A EL++  MK   +  + + YN+LI GFC
Sbjct: 175 MIHKGFS---PDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFC 231

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
                 +A+ +   M  NG +PD+VT+N  +NY C +  +D   +LL+LM + G+ PD  
Sbjct: 232 RAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVY 291

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           +YN L+ G C      +A  L  + +      DV SYN +I A CK      A  L+ EM
Sbjct: 292 SYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEM 351

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
             + I P V+T+   +      G+   A KL+D+M    + PD   + T ID LCK+G V
Sbjct: 352 GQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKV 411

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             A  +F  +        + ++N LING CK  R+  A  L+  +Q++G  PD VT   +
Sbjct: 412 EMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLI 471

Query: 511 IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG-FVQNNKKSKVVVL-LHKMAAE 568
           I  L +E ++  A  +   M  K          TL+RG  ++N   S+ +    H+  + 
Sbjct: 472 IGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRGNSIENASTSRCLDFKFHQNYSP 531

Query: 569 KL-VVSDLSLSSKV 581
              ++ D   S KV
Sbjct: 532 SFRIIKDFVFSRKV 545



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 217/463 (46%), Gaps = 25/463 (5%)

Query: 31  NPKTDLSSHHFKD----GTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS---PGMTS 83
           + + DL++H++      G S++ F   R  +G        +  + +  M+     P + +
Sbjct: 57  HSRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWA 116

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F I L +L    + D  + +F+++  NG  PD+    ++I+ +CK+     A      ++
Sbjct: 117 FNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMI 176

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAAR--LFKKLNVFACDPNVVTFNTLINGLCRTR- 200
              F+P+      ++ GLC +GR ++ A   +   +       + + +N LI+G CR   
Sbjct: 177 HKGFSPDNKACGAIVVGLC-DGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGR 235

Query: 201 -NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
            +   A+K F          C+PD+VTYN  ++  C +  +D AK+LL  M+   I P+V
Sbjct: 236 IDKAQAIKSFMRRNG-----CEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDV 290

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP----DVVTFNAMINYNCKDGKMDKVNR 315
            +YN L+ G C  +   +A  L    M N + P    DVV++N +I   CK G      +
Sbjct: 291 YSYNQLLKGICKGNCPDKAYLL----MTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYK 346

Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
           L E M Q+G+ PD VT+   +  F   G  + A++L   M   G   D   Y  +I+  C
Sbjct: 347 LFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLC 406

Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
           K  KVE A  ++ +M+ + I P VI++N L++G  +   + +A+ L ++MQ     PD  
Sbjct: 407 KSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEV 466

Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
           T+   I GL +   +  A  V+  + +    L       LI G
Sbjct: 467 TYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 178/405 (43%), Gaps = 5/405 (1%)

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           + + + I G  +      A+++F+EM     + C+   + YN  I  L      D A   
Sbjct: 10  LIYRSRIAGYVKAGLIDKAVQVFDEMSQ---SNCRVFSIDYNRFIGVLINHSRFDLANHY 66

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
             QM  R  + +  TY+  I G C V ++     L  +M      PD+  FN  ++    
Sbjct: 67  YSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFV 126

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
           +G++D    + E +++ G  PD VTY  ++ G C + +   A + +  M+ KG   D  +
Sbjct: 127 EGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKA 186

Query: 367 YNILINANCKDQKVEDAVCLYRE-MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
              ++   C  +KV+ A  L  + M S R++ S + YN L+SG  + G +  A  +   M
Sbjct: 187 CGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFM 246

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           + N   PD  T+  +++  C    + +A ++ + +     E  + +YN L+ G+CK    
Sbjct: 247 RRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCP 306

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A  L         + DVV+ +T+I   CK G    A  L  +M  K   P  VTF   
Sbjct: 307 DKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIF 366

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           ++ F+     +    LL +M  E  +  D    + ++D L K  K
Sbjct: 367 IKAFLGKGSFNIAKKLLDQM-TEMGLSPDCIFYTTIIDHLCKSGK 410



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 143/311 (45%), Gaps = 1/311 (0%)

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           +++  + + Y S I G+       +A  +F EM  +  +   + +N  I       + D 
Sbjct: 3   QSLGAHRLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDL 62

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
            N     M  RG +  + TY+  + G C V   +   EL   M +  C  D++++NI ++
Sbjct: 63  ANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLH 122

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
               + +++ A+ ++ +++    +P V+TY  ++ G+ ++     A++    M      P
Sbjct: 123 LLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSP 182

Query: 433 DSFTFATYIDGLCKNGFVLEAVQ-VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
           D+      + GLC    V  A + +   +++ + +L    YN LI+G C+ GR+  A  +
Sbjct: 183 DNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAI 242

Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
              ++  G  PD+VT +  +++ C E  +D A  LL  ME     P   ++  LL+G  +
Sbjct: 243 KSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICK 302

Query: 552 NNKKSKVVVLL 562
            N   K  +L+
Sbjct: 303 GNCPDKAYLLM 313


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 252/515 (48%), Gaps = 23/515 (4%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P  ++++ ++T L    + +    LF+ +   G+ PD++   +LI+  CK G+
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   +     +P  VT+  LI+      ++ +A  +F ++    C PN VT+  
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398

Query: 192 LINGLCRTRNTLVALKLFEEMV-------NEFGAICK------PDVVTYNSIIDGLCKDG 238
           L++GLC+  N   A +++ +++       ++F   C+      P+VVTY +++DGLCK  
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            VD A ELL  M      PN I Y++LI GFC       A+ +F++M   G  P V T+ 
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 518

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++I+   KDG++D   ++L  M++    P+ VTY +++DG C +G   +A +L   M  K
Sbjct: 519 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 578

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  +V +Y  LI+   K  K++ ++ L+ +M  +   P+ +TY  L++ L   G L  A
Sbjct: 579 GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA 638

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L+ +M+          +   I G  K+   + ++ + + + +         Y  LI+ 
Sbjct: 639 RLLLGEMKQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDC 696

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTC-----STMIHWLCKEGQMDKANDLLLDMEAK 533
             K GRL+ A +L   +     +P  V       +++I  LC   Q+++A  L  +M  +
Sbjct: 697 FSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 753

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
             VP    F  L++G V+  K  + + L + +  E
Sbjct: 754 GFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHE 788



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 259/580 (44%), Gaps = 64/580 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  L+ +L+   Q D    + K ++ +G   D F +    + LCK G  + A   
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA--- 94

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  I R  F  +TV    +I+GL       EA     ++   +C PNVVT+ TL++G  +
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +      ++   M+ E    C P+   +NS++   C +     A +LL +M      P 
Sbjct: 155 KKQLGWCKRIINMMMTEG---CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 259 VITYNSLI---CG--------------------------------------FCCVDDWKE 277
            + YN  I   CG                                       C V  + +
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  L  EMM  G  PD  T++ +I + C   K++K   L + M   GV PD  TY  L+D
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC  G I +A+ LF  M S GC   V +Y  LI+A  K ++V  A  ++  M+    RP
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKM----------------QLNDVVPDSFTFATYI 441
           + +TY  L+ GL + GN+  A ++  K+                  + + P+  T+   +
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 451

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCK   V  A ++  A+ +  CE     Y+ LI+G CK G++ +A ++F ++   G +
Sbjct: 452 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 511

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P V T +++I  + K+G++D A  +L  M   +C P+ VT+  ++ G  +  +  K + L
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L  M  EK    ++   + ++D L K  K    L+ F  +
Sbjct: 572 LSLM-EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 241/522 (46%), Gaps = 30/522 (5%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           ++D    L K +   G  PD    + +I  LC       AF++   +     TP+  T+ 
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+  C  G I +A  LF+++    C P VVT+  LI+   + +    A  +F  MV+ 
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD- 386

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM---------------KDRN-INPNV 259
             A C+P+ VTY +++DGLCK G + KA E+  ++               +DR+ + PNV
Sbjct: 387 --AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TY +L+ G C       A  L   M+ +G +P+ + ++A+I+  CK GK+D    +   
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M + G  P   TY SL+D     GR+  A ++   M+   C  +V +Y  +I+  C+  +
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            E A+ L   M  +   P+V+TY  L+ GL + G +  +L L  +M      P+  T+  
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+ LC  G + +A  +   ++       ++ Y C I G  K      +  +   ++  G
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYG 682

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT-----FCTLLRGFVQNNK 554
            +P       +I    K G+++ A +L  +M     VPS V      + +L++     ++
Sbjct: 683 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQ 739

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
             +   L  +M   +  V +LS+   ++  L + KK+ E L 
Sbjct: 740 VEEAFRLYSEM-TRRGFVPELSVFVCLIKGLVEVKKWDEALQ 780



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 235/482 (48%), Gaps = 23/482 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A   F  M  +  +P + ++TIL+    K    +    LF+ + S G  P +     L
Sbjct: 305 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTAL 364

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           I+   K      A  +  R++ +   PN VT+  L++GLC  G I +A  ++ KL     
Sbjct: 365 IHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSD 424

Query: 178 -----NVFACD------PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
                  F C+      PNVVT+  L++GLC+      A +L + M++   + C+P+ + 
Sbjct: 425 SADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS---SGCEPNHIV 481

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+++IDG CK G +D A+E+ LQM      P+V TY SLI           A  +  +M+
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +   P+VVT+ AMI+  C+ G+ +K  +LL LM ++G +P+ VTY +L+DG    G+I 
Sbjct: 542 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 601

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            + +LF  M  KGC  +  +Y +LIN  C    ++ A  L  EM        +  Y   +
Sbjct: 602 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAI 661

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            G  +  +   +L ++++M+    VP +  +   ID   K G +  A+++ + +      
Sbjct: 662 QGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSS 719

Query: 467 LRIET--YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           ++ +   Y  LI  LC   +++ A +L+  +  +G +P++     +I  L +  + D+A 
Sbjct: 720 VKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779

Query: 525 DL 526
            L
Sbjct: 780 QL 781



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 174/370 (47%), Gaps = 15/370 (4%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G   S ++ ++F C  +   +P + ++  L+  L K  + D    L   + S+G  P+  
Sbjct: 421 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 480

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V + LI+  CK G    A  V  ++ +  + P+  T+  LI+ +  +GR+  A ++  ++
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
              +C PNVVT+  +I+GLCR   +  ALKL   ++ E G  C P+VVTY ++IDGL K 
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLL-SLMEEKG--CSPNVVTYTALIDGLGKA 597

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G +D + +L  QM  +  +PN +TY  LI   C      +A+ L  EM      P  +  
Sbjct: 598 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT-YWPKYLQ- 655

Query: 298 NAMINYNCKDGKMDKVN----RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
                Y C      K       +LE M   G  P    Y  L+D F   GR+  A EL  
Sbjct: 656 ----GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHK 711

Query: 354 SM--VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
            M  V    + D   Y  LI A C   +VE+A  LY EM      P +  +  L+ GL +
Sbjct: 712 EMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 771

Query: 412 VGNLGDALKL 421
           V    +AL+L
Sbjct: 772 VKKWDEALQL 781



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 9/285 (3%)

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           D G +P  VT+NA++      G++D   R+ + M + G   D  T        C  GR +
Sbjct: 33  DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A ++   +  +  + D      +I+   +    ++A+     M      P+V+TY TLL
Sbjct: 93  DALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 149

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           SG  +   LG   ++I+ M      P+   F + +   C       A ++   +  C C 
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 209

Query: 467 LRIETYNCLINGLCKMGRLKT------ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                YN  I  +C   +L +      A K++  +     + + V  +     LC  G+ 
Sbjct: 210 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           DKA  L+ +M  K  VP   T+  ++       K  K  +L  +M
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 314


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 218/418 (52%), Gaps = 4/418 (0%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           P+  +F  L+ G C EGR  EA  L   +       +  T   ++   CR         L
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
           F  M +E G    P++V Y++ IDGLC+ G+V +A  +L +M  + + PNV T+ SLI G
Sbjct: 239 FRRM-SEMGT--PPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 269 FCCVDDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
            C +   + A  LF++++  +  +P+V T+  MI   CK+GK+ +   LL  M+++G+ P
Sbjct: 296 LCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
           +T TY +L+ G C  G   RA EL   M  +G   ++Y+YN +I   CK  K+++A  + 
Sbjct: 356 NTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVL 415

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
           R   S+ +    +TY  L++   + G++  AL L  +M      PD  T+ T I   C+ 
Sbjct: 416 RMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQ 475

Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
             + ++ Q+F    +       +TY  +I G C++G+L +A K+F R+   G +PD +T 
Sbjct: 476 RQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITY 535

Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
             +I  LCKE ++++A  L   M  K+ VP +VT  TL   + + +K +  V  L ++
Sbjct: 536 GALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRL 593



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 244/506 (48%), Gaps = 16/506 (3%)

Query: 54  RHKSGNITSNEAVYFFDCMIKMKPS--PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG 111
           RH      + EA   FD M +      P   SF  L+    +  +++   +L   + + G
Sbjct: 155 RHPGCFAHAREA---FDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQG 211

Query: 112 LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAA 171
              D     +++   C+ G       +  R+      PN V ++  I+GLC  G + +A 
Sbjct: 212 FCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAF 271

Query: 172 RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSII 231
            + +++      PNV T  +LI+GLC+      A +LF ++V    +  KP+V TY  +I
Sbjct: 272 HVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKS--SSYKPNVHTYTVMI 329

Query: 232 DGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQ 291
            G CK+G + +A+ LL +M ++ + PN  TY +LI G C    +  A  L  +M   G  
Sbjct: 330 GGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFL 389

Query: 292 PDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAREL 351
           P++ T+NA+I   CK GK+ +  ++L +   +G++ D VTY  L+   C  G I+ A +L
Sbjct: 390 PNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDL 449

Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
           F  M  K C  D+++Y  +I   C+ +++E +  L+ + LS  + P+  TY ++++G  +
Sbjct: 450 FKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCR 509

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN---CKCELR 468
           +G L  ALK+ ++M  +  +PDS T+   I  LCK   + EA  +F+ + +     C++ 
Sbjct: 510 LGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDV- 568

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
             T   L    C+  ++  A     RL  +       T   ++  L   G +D A+  L 
Sbjct: 569 --TRVTLAYEYCRRDKITIAVSFLDRLDKR---QQAHTADALVRKLSTVGNLDAASLFLK 623

Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNK 554
           ++  K+      T+ + +    ++N+
Sbjct: 624 NVLDKHYAVDHATYTSFINSCYESNR 649



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 7/324 (2%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++   +P   ++T L+    K   +D    L  ++   G  P+++  N +I   CK G 
Sbjct: 348 MVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGK 407

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A+ VL          + VT+  LI   C +G I  A  LFK++   +C P++ T+ T
Sbjct: 408 IQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTT 467

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I   C+ R    + +LF++ ++  G +  P   TY S+I G C+ G +  A ++  +M 
Sbjct: 468 IIAMYCQQRQMEQSQQLFDKCLS-IGLV--PTKQTYTSMIAGYCRLGKLTSALKVFERMV 524

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                P+ ITY +LI   C     +EA+ LF  M+D  + P  VT   +    C+  K+ 
Sbjct: 525 QHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKIT 584

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
                L+ + +R       T ++L+     VG +  A     +++ K    D  +Y   I
Sbjct: 585 IAVSFLDRLDKR---QQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFI 641

Query: 372 NANCKDQKVEDAVCLYREMLSERI 395
           N +C +           E +S+RI
Sbjct: 642 N-SCYESNRYALASEISEKISKRI 664



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 14/227 (6%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  +    + +  K G+IT   A+  F  M +    P + ++T ++ M  + +Q +    
Sbjct: 426 DKVTYTILITEHCKQGHITC--ALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQ 483

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           LF +  S GL P       +I   C++G  + A  V  R+++    P+++T+  LI+ LC
Sbjct: 484 LFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLC 543

Query: 163 AEGRIMEAARLFKKL---NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
            E R+ EA  LF+ +   ++  CD   VT  TL    CR     +A+   + +       
Sbjct: 544 KESRLEEARALFETMLDKHLVPCD---VTRVTLAYEYCRRDKITIAVSFLDRLDK----- 595

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            +    T ++++  L   G +D A   L  + D++   +  TY S I
Sbjct: 596 -RQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFI 641


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 249/508 (49%), Gaps = 23/508 (4%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  ++++ ++T L    + +    LF+ +   G+ PD++   +LI+  CK G+   A  +
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +     +P  VT+  LI+      ++ +A  +F ++    C PN VT+  L++GLC+
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 199 TRNTLVALKLFEEMV-------NEFGAICK------PDVVTYNSIIDGLCKDGFVDKAKE 245
             N   A +++ +++       ++F   C+      P+VVTY +++DGLCK   VD A E
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           LL  M      PN I Y++LI GFC       A+ +F++M   G  P V T+ ++I+   
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           KDG++D   ++L  M++    P+ VTY +++DG C +G   +A +L   M  KGC  +V 
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y  LI+   K  K++ ++ L+ +M  +   P+ +TY  L++ L   G L  A  L+ +M
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
           +          +   I G  K+   + ++ + + + +         Y  LI+   K GRL
Sbjct: 646 KQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRL 703

Query: 486 KTACKLFHRLQHKGPIPDVVTC-----STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           + A +L   +     +P  V       +++I  LC   Q+++A  L  +M  +  VP   
Sbjct: 704 EIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELS 760

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
            F  L++G V+  K  + + L + +  E
Sbjct: 761 VFVCLIKGLVEVKKWDEALQLCYGICHE 788



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 259/580 (44%), Gaps = 64/580 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  L+ +L+   Q D    + K ++ +G   D F +    + LCK G  + A   
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA--- 94

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L  I R  F  +TV    +I+GL       EA     ++   +C PNVVT+ TL++G  +
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            +      ++   M+ E    C P+   +NS++   C +     A +LL +M      P 
Sbjct: 155 KKQLGWCKRIINMMMTEG---CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 259 VITYNSLI---CG--------------------------------------FCCVDDWKE 277
            + YN  I   CG                                       C V  + +
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  L  EMM  G  PD  T++ +I + C   K++K   L + M   GV PD  TY  L+D
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC  G I +A+ LF  M S GC   V +Y  LI+A  K ++V  A  ++  M+    RP
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKM----------------QLNDVVPDSFTFATYI 441
           + +TY  L+ GL + GN+  A ++  K+                  + + P+  T+   +
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 451

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCK   V  A ++  A+ +  CE     Y+ LI+G CK G++ +A ++F ++   G +
Sbjct: 452 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 511

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P V T +++I  + K+G++D A  +L  M   +C P+ VT+  ++ G  +  +  K + L
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L  M  EK    ++   + ++D L K  K    L+ F  +
Sbjct: 572 LSLM-EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 241/522 (46%), Gaps = 30/522 (5%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           ++D    L K +   G  PD    + +I  LC       AF++   +     TP+  T+ 
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+  C  G I +A  LF+++    C P VVT+  LI+   + +    A  +F  MV+ 
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD- 386

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM---------------KDRN-INPNV 259
             A C+P+ VTY +++DGLCK G + KA E+  ++               +DR+ + PNV
Sbjct: 387 --AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TY +L+ G C       A  L   M+ +G +P+ + ++A+I+  CK GK+D    +   
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M + G  P   TY SL+D     GR+  A ++   M+   C  +V +Y  +I+  C+  +
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            E A+ L   M  +   P+V+TY  L+ GL + G +  +L L  +M      P+  T+  
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+ LC  G + +A  +   ++       ++ Y C I G  K      +  +   ++  G
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYG 682

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT-----FCTLLRGFVQNNK 554
            +P       +I    K G+++ A +L  +M     VPS V      + +L++     ++
Sbjct: 683 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQ 739

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
             +   L  +M   +  V +LS+   ++  L + KK+ E L 
Sbjct: 740 VEEAFRLYSEM-TRRGFVPELSVFVCLIKGLVEVKKWDEALQ 780



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 235/482 (48%), Gaps = 23/482 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A   F  M  +  +P + ++TIL+    K    +    LF+ + S G  P +     L
Sbjct: 305 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTAL 364

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           I+   K      A  +  R++ +   PN VT+  L++GLC  G I +A  ++ KL     
Sbjct: 365 IHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSD 424

Query: 178 -----NVFACD------PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
                  F C+      PNVVT+  L++GLC+      A +L + M++   + C+P+ + 
Sbjct: 425 SADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS---SGCEPNHIV 481

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+++IDG CK G +D A+E+ LQM      P+V TY SLI           A  +  +M+
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +   P+VVT+ AMI+  C+ G+ +K  +LL LM ++G +P+ VTY +L+DG    G+I 
Sbjct: 542 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 601

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            + +LF  M  KGC  +  +Y +LIN  C    ++ A  L  EM        +  Y   +
Sbjct: 602 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAI 661

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            G  +  +   +L ++++M+    VP +  +   ID   K G +  A+++ + +      
Sbjct: 662 QGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSS 719

Query: 467 LRIET--YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           ++ +   Y  LI  LC   +++ A +L+  +  +G +P++     +I  L +  + D+A 
Sbjct: 720 VKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779

Query: 525 DL 526
            L
Sbjct: 780 QL 781



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 174/370 (47%), Gaps = 15/370 (4%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G   S ++ ++F C  +   +P + ++  L+  L K  + D    L   + S+G  P+  
Sbjct: 421 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 480

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V + LI+  CK G    A  V  ++ +  + P+  T+  LI+ +  +GR+  A ++  ++
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
              +C PNVVT+  +I+GLCR   +  ALKL   ++ E G  C P+VVTY ++IDGL K 
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLL-SLMEEKG--CSPNVVTYTALIDGLGKA 597

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G +D + +L  QM  +  +PN +TY  LI   C      +A+ L  EM      P  +  
Sbjct: 598 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT-YWPKYLQ- 655

Query: 298 NAMINYNCKDGKMDKVN----RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
                Y C      K       +LE M   G  P    Y  L+D F   GR+  A EL  
Sbjct: 656 ----GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHK 711

Query: 354 SM--VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
            M  V    + D   Y  LI A C   +VE+A  LY EM      P +  +  L+ GL +
Sbjct: 712 EMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 771

Query: 412 VGNLGDALKL 421
           V    +AL+L
Sbjct: 772 VKKWDEALQL 781



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 9/285 (3%)

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           D G +P  VT+NA++      G++D   R+ + M + G   D  T        C  GR +
Sbjct: 33  DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A ++   +  +  + D      +I+   +    ++A+     M      P+V+TY TLL
Sbjct: 93  DALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 149

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
           SG  +   LG   ++I+ M      P+   F + +   C       A ++   +  C C 
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 209

Query: 467 LRIETYNCLINGLCKMGRLKT------ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                YN  I  +C   +L +      A K++  +     + + V  +     LC  G+ 
Sbjct: 210 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           DKA  L+ +M  K  VP   T+  ++       K  K  +L  +M
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 314



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 8/129 (6%)

Query: 94  NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVT 153
           +K +   + + + + S G  P   V  +LI+C  K G    A  +   ++     P++V 
Sbjct: 665 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVK 721

Query: 154 -----FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
                +  LI  LC   ++ EA RL+ ++      P +  F  LI GL   +    AL+L
Sbjct: 722 TDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781

Query: 209 FEEMVNEFG 217
              + +E G
Sbjct: 782 CYGICHEVG 790


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 230/446 (51%), Gaps = 16/446 (3%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N L+   C+ G  + A  VLG   R+    N VT+  LI+G C  GR+ +A RL   + V
Sbjct: 128 NTLVAGYCRDGRLADAERVLG-AARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPV 186

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+  T+NT++ GLC  +    A +L  EM+      C P+ VT+ + I   C++G 
Sbjct: 187 A---PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNR---CPPNEVTFATQIRSFCQNGL 240

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D+A +LL QM      P+V+ Y++LI GF       +A  L   M+    +P+ V +NA
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 297

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
            +   C   + + +  L+  M+++G +P+  T++ L+   C    +  A E+   M   G
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  D  +YNI+IN+  +  +V+DA+ L   M+    +P  + +N +L G  +     DA 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDAS 414

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +LI +M  +D      TF   ID LC+NG V  A QVF+ +   +C   I TY+ L+NG 
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
            + G ++ A +LF  +  K   PD+ + + ++  LC+  + + A +L+ +M  K+C P+E
Sbjct: 475 SEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKM 565
           VTF  L+    Q     + + +L +M
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQM 557



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 230/494 (46%), Gaps = 47/494 (9%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++T L+    ++ + D  + L   + S  + PD +  N ++  LC       A  ++ 
Sbjct: 158 VVTYTALIDGYCRSGRLDDALRL---IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMA 214

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            ++R+   PN VTF   I   C  G +  A +L  ++  + C P+VV ++TLING     
Sbjct: 215 EMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQG 274

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           +   AL L   M      +CKP+ V YN+ + GLC     +   EL+ +M  +  +PN  
Sbjct: 275 HVDQALDLLNTM------LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEA 328

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           T++ LI   C  +    A  +  +M   G +PD V +N +IN   + G++D   RLL  M
Sbjct: 329 TFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM 388

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           +     PD + +N+++ GFC   R   A EL   M    C     ++NILI+  C++  V
Sbjct: 389 V---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLV 445

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVG--------------------------- 413
             A  ++ +M   R  P ++TY++LL+G  + G                           
Sbjct: 446 NYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKG 505

Query: 414 -----NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
                   DA +LI +M   D  P+  TF   I+ LC+ G V  A++V + + N      
Sbjct: 506 LCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 565

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           I TYN LING  + GRL  A KL   +  K   PD ++ ++ +  LC+  +   A +L+ 
Sbjct: 566 IFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVA 622

Query: 529 DMEAKNCVPSEVTF 542
           +M    C P+EVTF
Sbjct: 623 EMLRNKCTPNEVTF 636



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 224/442 (50%), Gaps = 15/442 (3%)

Query: 73  IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
           I+ +  P   +F   +    +N   D  V L  ++   G  PD+ + + LIN   + G  
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 276

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
             A  +L  +L     PNTV +N  + GLC   R  +   L  ++    C PN  TF+ L
Sbjct: 277 DQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSML 333

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           I+ LC+      A+++ E+M  ++G  C+PD V YN II+ L + G VD A  LL  M  
Sbjct: 334 ISSLCQNNLVDSAVEVLEQM-EKYG--CEPDTVNYNIIINSLSERGRVDDALRLLNSMV- 389

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
               P+ + +N+++ GFC  + W +A  L  +M  +      +TFN +I+  C++G ++ 
Sbjct: 390 --CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNY 447

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             ++ E M +    PD VTY+SL++GF   G +  A +LF SM    C+ D++SYN ++ 
Sbjct: 448 ATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLK 504

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             C+  + EDA  L  EM+ +   P+ +T+N L++ L Q G +  A++++++M      P
Sbjct: 505 GLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTP 564

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D FT+   I+G  + G + +A+++   +    C+    +YN  + GLC+  R + A +L 
Sbjct: 565 DIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELV 621

Query: 493 HRLQHKGPIPDVVTCSTMIHWL 514
             +      P+ VT     H L
Sbjct: 622 AEMLRNKCTPNEVTFKYANHLL 643



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 175/331 (52%), Gaps = 12/331 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++   SP   +F++L++ L +N   D+ V + +++   G  PD    N++IN L + G 
Sbjct: 318 MVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGR 377

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L  ++     P+ + FN ++ G C   R  +A+ L  ++    C    +TFN 
Sbjct: 378 VDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNI 434

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+ LC+      A ++FE+M       C PD+VTY+S+++G  + G V+ A +L   M 
Sbjct: 435 LIDTLCQNGLVNYATQVFEQMPRYR---CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP 491

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                P++ +YN+++ G C    W++A  L  EM+     P+ VTFN +IN  C+ G +D
Sbjct: 492 ---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVD 548

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   +LE M   G  PD  TYN+L++GF   GR+  A +L  +M    C+ D  SYN  +
Sbjct: 549 RAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTL 605

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITY 402
              C+ ++ +DA  L  EML  +  P+ +T+
Sbjct: 606 KGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 184/369 (49%), Gaps = 12/369 (3%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
            D +  M   P    +   L  L   ++++ +  L   +   G  P+    ++LI+ LC+
Sbjct: 280 LDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQ 339

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
             +   A  VL ++ +    P+TV +N +IN L   GR+ +A RL   LN   C P+ + 
Sbjct: 340 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL---LNSMVCKPDALG 396

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FN ++ G CR      A +L  +M   F   C    +T+N +ID LC++G V+ A ++  
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQM---FRDDCPLIEMTFNILIDTLCQNGLVNYATQVFE 453

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           QM      P+++TY+SL+ GF      + A  LF  M     +PD+ ++NA++   C+  
Sbjct: 454 QMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAA 510

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           + +    L+  M+ +   P+ VT+N L++  C  G + RA E+   M + G   D+++YN
Sbjct: 511 RWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYN 570

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LIN   +  +++DA+ L   M     +P  I+YN+ L GL +     DA +L+ +M  N
Sbjct: 571 ALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRN 627

Query: 429 DVVPDSFTF 437
              P+  TF
Sbjct: 628 KCTPNEVTF 636



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 175/377 (46%), Gaps = 11/377 (2%)

Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
           V++N+++ G C+DG +  A+ +L   +      NV+TY +LI G+C      +A  L   
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATGA-ANVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           M    V PD  T+N ++   C   K ++   L+  MI+    P+ VT+ + +  FC  G 
Sbjct: 184 M---PVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
           + RA +L   M   GC  DV  Y+ LIN   +   V+ A+ L   ML    +P+ + YN 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 297

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
            L GL       D  +L+ +M      P+  TF+  I  LC+N  V  AV+V + +    
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           CE     YN +IN L + GR+  A +L + +  K   PD +  + ++   C+  +   A+
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDAS 414

Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
           +L+  M   +C   E+TF  L+    QN   +    +  +M   +    D+   S +++ 
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYR-CTPDIVTYSSLLNG 473

Query: 585 LSKDKKYRECLNQFRHL 601
            S+       +  FR +
Sbjct: 474 FSEQGLVEVAIQLFRSM 490


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 252/515 (48%), Gaps = 23/515 (4%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P  ++++ ++T L    + +    LF+ +   G+ PD++   +LI+  CK G+
Sbjct: 214 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 273

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +   +     +P  VT+  LI+      ++ +A  +F ++    C PN VT+  
Sbjct: 274 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 333

Query: 192 LINGLCRTRNTLVALKLFEEMV-------NEFGAICK------PDVVTYNSIIDGLCKDG 238
           L++GLC+  N   A +++ +++       ++F   C+      P+VVTY +++DGLCK  
Sbjct: 334 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 393

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            VD A ELL  M      PN I Y++LI GFC       A+ +F++M   G  P V T+ 
Sbjct: 394 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 453

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
           ++I+   KDG++D   ++L  M++    P+ VTY +++DG C +G   +A +L   M  K
Sbjct: 454 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 513

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  +V +Y  LI+   K  K++ ++ L+ +M  +   P+ +TY  L++ L   G L  A
Sbjct: 514 GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA 573

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
             L+ +M+          +   I G  K+   + ++ + + + +         Y  LI+ 
Sbjct: 574 RLLLGEMKQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDC 631

Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTC-----STMIHWLCKEGQMDKANDLLLDMEAK 533
             K GRL+ A +L   +     +P  V       +++I  LC   Q+++A  L  +M  +
Sbjct: 632 FSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 688

Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
             VP    F  L++G V+  K  + + L + +  E
Sbjct: 689 GFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHE 723



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 226/475 (47%), Gaps = 26/475 (5%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           PN VT+  L++G   + ++    R+   +    C+PN   FN+L++  C  ++   A KL
Sbjct: 75  PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 134

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKD------GFVDKAKELLLQMKDRNINPNVITY 262
              M       C P  V YN  I  +C          +D A+++  +M   N   N +  
Sbjct: 135 LNRMTT---CGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNV 191

Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            +     C V  + +A  L  EMM  G  PD  T++ +I + C   K++K   L + M  
Sbjct: 192 ANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 251

Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
            GV PD  TY  L+D FC  G I +A+ LF  M S GC   V +Y  LI+A  K ++V  
Sbjct: 252 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 311

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM----------------Q 426
           A  ++  M+    RP+ +TY  L+ GL + GN+  A ++  K+                 
Sbjct: 312 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 371

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
            + + P+  T+   +DGLCK   V  A ++  A+ +  CE     Y+ LI+G CK G++ 
Sbjct: 372 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 431

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
           +A ++F ++   G +P V T +++I  + K+G++D A  +L  M   +C P+ VT+  ++
Sbjct: 432 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 491

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
            G  +  +  K + LL  M  EK    ++   + ++D L K  K    L+ F  +
Sbjct: 492 DGLCRIGESEKALKLLSLM-EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 545



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 241/522 (46%), Gaps = 30/522 (5%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           ++D    L K +   G  PD    + +I  LC       AF++   +     TP+  T+ 
Sbjct: 203 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 262

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+  C  G I +A  LF+++    C P VVT+  LI+   + +    A  +F  MV+ 
Sbjct: 263 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD- 321

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM---------------KDRN-INPNV 259
             A C+P+ VTY +++DGLCK G + KA E+  ++               +DR+ + PNV
Sbjct: 322 --AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 379

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
           +TY +L+ G C       A  L   M+ +G +P+ + ++A+I+  CK GK+D    +   
Sbjct: 380 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 439

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
           M + G  P   TY SL+D     GR+  A ++   M+   C  +V +Y  +I+  C+  +
Sbjct: 440 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 499

Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
            E A+ L   M  +   P+V+TY  L+ GL + G +  +L L  +M      P+  T+  
Sbjct: 500 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 559

Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            I+ LC  G + +A  +   ++       ++ Y C I G  K      +  +   ++  G
Sbjct: 560 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYG 617

Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT-----FCTLLRGFVQNNK 554
            +P       +I    K G+++ A +L  +M     VPS V      + +L++     ++
Sbjct: 618 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQ 674

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
             +   L  +M   +  V +LS+   ++  L + KK+ E L 
Sbjct: 675 VEEAFRLYSEM-TRRGFVPELSVFVCLIKGLVEVKKWDEALQ 715



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 235/482 (48%), Gaps = 23/482 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            +A   F  M  +  +P + ++TIL+    K    +    LF+ + S G  P +     L
Sbjct: 240 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTAL 299

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL----- 177
           I+   K      A  +  R++ +   PN VT+  L++GLC  G I +A  ++ KL     
Sbjct: 300 IHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSD 359

Query: 178 -----NVFACD------PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
                  F C+      PNVVT+  L++GLC+      A +L + M++   + C+P+ + 
Sbjct: 360 SADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS---SGCEPNHIV 416

Query: 227 YNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
           Y+++IDG CK G +D A+E+ LQM      P+V TY SLI           A  +  +M+
Sbjct: 417 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 476

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
            +   P+VVT+ AMI+  C+ G+ +K  +LL LM ++G +P+ VTY +L+DG    G+I 
Sbjct: 477 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 536

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            + +LF  M  KGC  +  +Y +LIN  C    ++ A  L  EM        +  Y   +
Sbjct: 537 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAI 596

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            G  +  +   +L ++++M+    VP +  +   ID   K G +  A+++ + +      
Sbjct: 597 QGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSS 654

Query: 467 LRIET--YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
           ++ +   Y  LI  LC   +++ A +L+  +  +G +P++     +I  L +  + D+A 
Sbjct: 655 VKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 714

Query: 525 DL 526
            L
Sbjct: 715 QL 716



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 174/370 (47%), Gaps = 15/370 (4%)

Query: 58  GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
           G   S ++ ++F C  +   +P + ++  L+  L K  + D    L   + S+G  P+  
Sbjct: 356 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 415

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           V + LI+  CK G    A  V  ++ +  + P+  T+  LI+ +  +GR+  A ++  ++
Sbjct: 416 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 475

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
              +C PNVVT+  +I+GLCR   +  ALKL   ++ E G  C P+VVTY ++IDGL K 
Sbjct: 476 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLL-SLMEEKG--CSPNVVTYTALIDGLGKA 532

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G +D + +L  QM  +  +PN +TY  LI   C      +A+ L  EM      P  +  
Sbjct: 533 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT-YWPKYLQ- 590

Query: 298 NAMINYNCKDGKMDKVN----RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
                Y C      K       +LE M   G  P    Y  L+D F   GR+  A EL  
Sbjct: 591 ----GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHK 646

Query: 354 SM--VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
            M  V    + D   Y  LI A C   +VE+A  LY EM      P +  +  L+ GL +
Sbjct: 647 EMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 706

Query: 412 VGNLGDALKL 421
           V    +AL+L
Sbjct: 707 VKKWDEALQL 716



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 3/142 (2%)

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
           T       L + G   DAL +I++    D   D+      I GL +  +  EA+     +
Sbjct: 12  TVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 68

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
           R   C   + TY  L++G  K  +L    ++ + +  +G  P+    ++++H  C E   
Sbjct: 69  RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 128

Query: 521 DKANDLLLDMEAKNCVPSEVTF 542
             A  LL  M    C P  V +
Sbjct: 129 AYAYKLLNRMTTCGCPPGYVVY 150


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 231/503 (45%), Gaps = 38/503 (7%)

Query: 100 VVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLIN 159
            + +  R+   GL P    + +L   L ++G     + +L  ++     P    FN +I 
Sbjct: 98  ALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVIL 157

Query: 160 GLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
           G C +G +     L   +  F C P+V  +N LIN  C    T  AL     M++     
Sbjct: 158 GFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNG--- 214

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           C P +VT+ ++I+  C  G + +A+ L   MK+    PNV+ YN+L+ G+    D  +A 
Sbjct: 215 CTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQAN 274

Query: 280 CLFIEMMDNGVQPDVVTFNAMI-----------------------------NYN------ 304
            L+ EM    V PD  TFN ++                              YN      
Sbjct: 275 MLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGL 334

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C  G +D+  + LE M+++G+ P  V +NS++  +   G   +A + +  MV  G     
Sbjct: 335 CWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSS 394

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            + + LI    K  ++++A  L  EM+ E +  +   +  LL G F++G++  A  L ++
Sbjct: 395 LTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNE 454

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+   + PD+  F+ +I+GL   G V EA  VF  +           YN LI G C  GR
Sbjct: 455 MEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGR 514

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           L+ A  L   +  KG +PD+ T + +I+ LCKEG+M  A+D+  +M     +P  VT+ T
Sbjct: 515 LQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNT 574

Query: 545 LLRGFVQNNKKSKVVVLLHKMAA 567
           L+ G+ +         +++KM A
Sbjct: 575 LIDGYCKAFDTVSTDEVVNKMYA 597



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/545 (27%), Positives = 248/545 (45%), Gaps = 41/545 (7%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           MI   P P   +F  ++    +        SL   +      PD++  N+LIN  C  G 
Sbjct: 140 MIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQ 199

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
           T  A   +  ++ +  TP+ VTF  +IN  C +G +MEA  LF  +      PNVV +NT
Sbjct: 200 TFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNT 259

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+NG  + R+   A  L+EEM ++  A   PD  T+N ++ G  + G  +    LL  + 
Sbjct: 260 LMNGYVKARDIGQANMLYEEMKSKAVA---PDCTTFNILVAGHYRYGREEDRDRLLRDLS 316

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                     YN  + G C      EA     +M++ G+ P VV FN++I    + G  +
Sbjct: 317 QSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEE 376

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           K  +   +M++ G+ P ++T +SL+ G   + R+  AR+L   M+ +G   +  ++ +L+
Sbjct: 377 KAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLL 436

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVIT------------------------------ 401
           +   +   V  A  L+ EM    I P  +                               
Sbjct: 437 DGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFM 496

Query: 402 -----YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
                YN+L+ G    G L +AL L  +M    ++PD FT    I+GLCK G +  A  V
Sbjct: 497 PNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDV 556

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
           F+ + +      I TYN LI+G CK     +  ++ +++   G  PD+ T +  +H LC 
Sbjct: 557 FRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCT 616

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL--LHKMA-AEKLVVS 573
             +M +A  +L ++ +   VP  VT+ T++ G   +  +  ++V   L KMA    +V +
Sbjct: 617 GRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTDVLERAMIVTAKLLKMAFVPNVVTA 676

Query: 574 DLSLS 578
           +L LS
Sbjct: 677 NLLLS 681



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/529 (25%), Positives = 242/529 (45%), Gaps = 11/529 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+ +   MI    +P + +F  ++             +LF  +   G  P++   N L+
Sbjct: 202 DALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLM 261

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N   K      A ++   +      P+  TFN L+ G    GR  +  RL + L+     
Sbjct: 262 NGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSL 321

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
                +N  ++GLC       A+K  E+M+ +      P VV +NSII    + G  +KA
Sbjct: 322 SISSLYNICVSGLCWAGWLDEAMKFLEDMLEKG---ITPTVVAFNSIIAAYSRAGLEEKA 378

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +    M    + P+ +T +SLI G   +   +EA+ L  EM+  G+  +   F  +++ 
Sbjct: 379 YKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDG 438

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             + G +     L   M  RG++PD V +++ ++G  +VG +  A ++F+ M  KG   +
Sbjct: 439 YFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPN 498

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
            + YN LI   C   ++++A+ L REM  + + P + T N +++GL + G +  A  +  
Sbjct: 499 NFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFR 558

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
            M    ++PD  T+ T IDG CK    +   +V   +     +  I TYN  ++GLC   
Sbjct: 559 NMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGR 618

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
           ++  A  +   L   G +PD VT +T+++ +C +  +++A  +   +     VP+ VT  
Sbjct: 619 KMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTAN 677

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
            LL  F +     K +     M  +KL  +++S     + +   D+ YR
Sbjct: 678 LLLSHFCKQGMPEKTI-----MWGQKL--NEISFGFDEISIKLMDRAYR 719



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 208/499 (41%), Gaps = 76/499 (15%)

Query: 173 LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIID 232
           ++K+   F  D +V+  +TL+ G  +      AL++   M  E G   +P       +  
Sbjct: 68  MWKRHAEFESDFSVL--DTLMRGFLKVEMGCEALEIVGRM-REVG--LRPSSSAITILFK 122

Query: 233 GLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
            L + G      +LL  M  +   P    +N++I GFC     K  + L   M     QP
Sbjct: 123 LLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQP 182

Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
           DV  +N +IN  C  G+       +  MI  G  P  VT+ ++++ FC  G +  AR LF
Sbjct: 183 DVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLF 242

Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
             M   G   +V  YN L+N   K + +  A  LY EM S+ + P   T+N L++G ++ 
Sbjct: 243 DGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRY 302

Query: 413 GN-----------------------------------LGDALKLIDKMQLNDVVPDSFTF 437
           G                                    L +A+K ++ M    + P    F
Sbjct: 303 GREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAF 362

Query: 438 ATYIDGLCKNGFVLEAVQVF----------------------------QAIRNCKCELRI 469
            + I    + G   +A + +                            Q  R+   E+ +
Sbjct: 363 NSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIV 422

Query: 470 E-------TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
           E        +  L++G  +MG +  A  L++ ++ +G  PD V  S  I+ L   G +D+
Sbjct: 423 EGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDE 482

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
           A D+ L M  K  +P+   + +L+RGF  + +  + ++L  +MA + L + D+  ++ ++
Sbjct: 483 AYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGL-LPDIFTTNIII 541

Query: 583 DLLSKDKKYRECLNQFRHL 601
           + L K+ + +   + FR++
Sbjct: 542 NGLCKEGRMKSASDVFRNM 560



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 169/366 (46%), Gaps = 7/366 (1%)

Query: 240 VDKAKELLLQMKDRN--INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           VD+++E++  M  R+     +    ++L+ GF  V+   EA  +   M + G++P     
Sbjct: 58  VDRSREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAI 117

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
             +     + G    V +LL  MI +G  P    +N+++ GFC  G +     L   M  
Sbjct: 118 TILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQK 177

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
             C+ DVY+YNILINA C   +  DA+   R M+     PS++T+ T+++     GN+ +
Sbjct: 178 FKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMME 237

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A  L D M+    +P+   + T ++G  K   + +A  +++ +++        T+N L+ 
Sbjct: 238 ARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVA 297

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G  + GR +   +L   L   G +      +  +  LC  G +D+A   L DM  K   P
Sbjct: 298 GHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITP 357

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQ 597
           + V F +++  + +   + K       M    L  S L+ SS ++ L    K +R  L +
Sbjct: 358 TVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGL---SKLWR--LQE 412

Query: 598 FRHLLF 603
            R LL+
Sbjct: 413 ARDLLY 418



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 6/228 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  + + F+N     G +  +EA   F  M K    P    +  L+     + +    + 
Sbjct: 463 DAVAFSAFINGLSIVGLV--DEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALM 520

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L + +   GL PD+F  N++IN LCK G    A  V   +  +   P+ VT+N LI+G C
Sbjct: 521 LEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYC 580

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
                +    +  K+     DP++ T+N  ++GLC  R    A+ + EE+++   A   P
Sbjct: 581 KAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELIS---AGVVP 637

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           D VTYN++++G+C D  +++A  +  ++      PNV+T N L+  FC
Sbjct: 638 DTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFC 684


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 206/393 (52%), Gaps = 6/393 (1%)

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           N+ V +  F   + E+G    P V  YN +I+  CK+G +  AK +  +++ R + P  +
Sbjct: 202 NSPVTIWTFYSEILEYG--FPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTV 259

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           ++N+LI G C   +  E   L   M +N + PDV T++ +I+  CK+G++D   +L + M
Sbjct: 260 SFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM 319

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            QRG+ P+ +T+ +L+DG C   RI  A   +  M++ G + D+  YN L+N  CK   V
Sbjct: 320 QQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDV 379

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
             A  L  EM    ++P  ITY TL+ G  + G+L  A+++   M    VV D+  F   
Sbjct: 380 NKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAL 439

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           I G C++G V +A +  + +     +    TY  +I+G CK G +K   KL   +Q  G 
Sbjct: 440 ISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
            P V+T + +++ LCK+GQM  AN LL  M      P ++T+  LL G  +N K   ++ 
Sbjct: 500 KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL- 558

Query: 561 LLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
              K+  EK ++ D +  + +V   +K  K R+
Sbjct: 559 ---KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQ 588



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 214/445 (48%), Gaps = 35/445 (7%)

Query: 36  LSSHH-FKDGTSIAKFLNDRHKSGNITSNEAV-----------YFFDCMIKMKPSPGMTS 83
           LS+H  F++  SI +FL  R    +  S  A            + FD ++      G  S
Sbjct: 111 LSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVS 170

Query: 84  FTILLTMLAKNKQYD--------------------TVVSLFKRLNSNGLFPDLFVLNLLI 123
             I    L +N  +                     T+ + +  +   G  P +   N+LI
Sbjct: 171 DAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILI 230

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  CK G    A ++   I +    P TV+FN LINGLC    + E  RL K +      
Sbjct: 231 NKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIY 290

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V T++ LI+GLC+     VA +LF+EM        +P+ +T+ ++IDG C+   +D A
Sbjct: 291 PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG---LRPNGITFTALIDGQCRSRRIDSA 347

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
                QM    + P+++ YN+L+ G C V D  +A+ L  EM   G++PD +T+  +I+ 
Sbjct: 348 MNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDG 407

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            CK+G ++    + + M + GV  D V + +L+ GFC  GR+  A      MV  G + D
Sbjct: 408 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPD 467

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
             +Y ++I+  CK   V+    L +EM     +P VITYN L++GL + G + +A  L++
Sbjct: 468 DATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLE 527

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNG 448
            M    V PD  T+   ++G CKNG
Sbjct: 528 AMLNLGVTPDDITYNILLEGHCKNG 552



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 177/334 (52%), Gaps = 5/334 (1%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G+I   +A   F+ + K    P   SF  L+  L K++  D    L K +  N ++PD
Sbjct: 235 KEGSI--RDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPD 292

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +F  ++LI+ LCK G    A  +   + +    PN +TF  LI+G C   RI  A   + 
Sbjct: 293 VFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYH 352

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P++V +NTL+NGLC+  +   A KL +EM        KPD +TY ++IDG C
Sbjct: 353 QMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRM---VGMKPDKITYTTLIDGYC 409

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G ++ A E+   M +  +  + + + +LI GFC     ++A+    EM++ G++PD  
Sbjct: 410 KEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDA 469

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  +I+  CK G +    +LL+ M   G  P  +TYN LM+G C  G++  A  L  +M
Sbjct: 470 TYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAM 529

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           ++ G   D  +YNIL+  +CK+ K ED + L  E
Sbjct: 530 LNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 36/204 (17%)

Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL-------------------------- 467
           +F F   +     +GFV +A+Q F+ +RN   ++                          
Sbjct: 153 NFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYS 212

Query: 468 ---------RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
                    +++ YN LIN  CK G ++ A  +F+ ++ +G  P  V+ +T+I+ LCK  
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLS 578
            +D+   L   ME     P   T+  L+ G  +  +      L  +M    L  + ++ +
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332

Query: 579 SKVVDLLSKDKKYRECLNQFRHLL 602
           + ++D   + ++    +N +  +L
Sbjct: 333 A-LIDGQCRSRRIDSAMNTYHQML 355


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 206/390 (52%), Gaps = 3/390 (0%)

Query: 150 NTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
           +  +F  +I G C  G I ++  L  +L  F   PNVV + TLI+G C+      A  LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
            EM  +FG +   +  TY  +I GL K+G   +  E+  +M++  + PN+ TYN ++   
Sbjct: 222 FEM-GKFGLVA--NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQL 278

Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
           C     K+A  +F EM + GV  ++VT+N +I   C++ K ++ N +++ M   G+NP+ 
Sbjct: 279 CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNL 338

Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
           +TYN+L+DGFC V ++ +A  L   + S+G    + +YNIL++  CK      A  + +E
Sbjct: 339 ITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           M    I+PS +TY  L+    +  N+  A++L   M+   + PD  T++  I G C  G 
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGR 458

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           + EA ++F+++   K E     YN ++ G CK G    A +LF  ++ K   P+V +   
Sbjct: 459 MNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
           MI  LCKE +  +A  L+  M      PS+
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDSGIGPSD 548



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 235/472 (49%), Gaps = 9/472 (1%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
           +  ++IN   +      +      ++   F P +  FN L+  +       +    F + 
Sbjct: 96  LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES 155

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
            +     +V +F  +I G C       +  L  E+  EFG    P+VV Y ++IDG CK 
Sbjct: 156 KIKVV-LDVYSFGIVIKGCCEAGEIEKSFDLLVEL-REFG--FSPNVVIYTTLIDGCCKK 211

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G ++KAK+L  +M    +  N  TY  LI G       K+   ++ +M ++GV P++ T+
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTY 271

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
           N ++N  CKDG+     ++ + M +RGV+ + VTYN+L+ G C   + + A E+   M S
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKS 331

Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
            G   ++ +YN LI+  C  +K+  A+ L R++ S  + PS++TYN L+SG  + G+   
Sbjct: 332 DGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSG 391

Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
           A K++ +M+   + P   T+   ID   ++  + +A+Q+  ++        + TY+ LI+
Sbjct: 392 AGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIH 451

Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           G C  GR+  A +LF  +  K   P+ V  +TM+   CKEG   +A  L  +ME K   P
Sbjct: 452 GFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPP 511

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
           +  ++  ++    +  K  +   L+     EK++ S +  S  +++L+S+ K
Sbjct: 512 NVASYRYMIEVLCKERKSKEAEGLV-----EKMIDSGIGPSDSILNLISRAK 558



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 215/419 (51%), Gaps = 39/419 (9%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + ++Y+F+ M+     PG   F  LLT +  +  ++     F   +   +  D++   ++
Sbjct: 111 DSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIKVVLDVYSFGIV 169

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF-------- 174
           I   C+ G    +F +L  +    F+PN V +  LI+G C +G I +A  LF        
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL 229

Query: 175 ---------------------------KKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
                                      +K+      PN+ T+N ++N LC+   T  A K
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFK 289

Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
           +F+EM  E G  C  ++VTYN++I GLC++   ++A E++ QMK   INPN+ITYN+LI 
Sbjct: 290 VFDEM-RERGVSC--NIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLID 346

Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
           GFC V    +A  L  ++   G+ P +VT+N +++  CK G      ++++ M +RG+ P
Sbjct: 347 GFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP 406

Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
             VTY  L+D F     + +A +L  SM   G   DV++Y++LI+  C   ++ +A  L+
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLF 466

Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + M+ ++  P+ + YNT++ G  + G+   AL+L  +M+  ++ P+  ++   I+ LCK
Sbjct: 467 KSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 195/367 (53%), Gaps = 6/367 (1%)

Query: 69  FDCMIKMKP---SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
           FD +++++    SP +  +T L+    K  + +    LF  +   GL  + +   +LI+ 
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
           L K GI    F +  ++      PN  T+N ++N LC +GR  +A ++F ++       N
Sbjct: 243 LFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCN 302

Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
           +VT+NTLI GLCR      A ++ ++M ++      P+++TYN++IDG C    + KA  
Sbjct: 303 IVTYNTLIGGLCREMKANEANEVMDQMKSDG---INPNLITYNTLIDGFCGVRKLGKALS 359

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           L   +K R ++P+++TYN L+ GFC   D   A  +  EM + G++P  VT+  +I+   
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFA 419

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           +   M+K  +L   M + G+ PD  TY+ L+ GFC+ GR++ A  LF SMV K    +  
Sbjct: 420 RSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEV 479

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
            YN ++   CK+     A+ L+REM  + + P+V +Y  ++  L +     +A  L++KM
Sbjct: 480 IYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539

Query: 426 QLNDVVP 432
             + + P
Sbjct: 540 IDSGIGP 546



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 173/344 (50%), Gaps = 1/344 (0%)

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           +V ++  +I G C   + +++  L +E+ + G  P+VV +  +I+  CK G+++K   L 
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
             M + G+  +  TY  L+ G    G   +  E++  M   G   ++++YN ++N  CKD
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
            + +DA  ++ EM    +  +++TYNTL+ GL +     +A +++D+M+ + + P+  T+
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341

Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
            T IDG C    + +A+ + + +++      + TYN L++G CK G    A K+   ++ 
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
           +G  P  VT + +I    +   M+KA  L   ME     P   T+  L+ GF    + ++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNE 461

Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
              L   M  +K   +++  ++ V+    +   YR  L  FR +
Sbjct: 462 ASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYR-ALRLFREM 504



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 137/274 (50%), Gaps = 7/274 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + +A   FD M +   S  + ++  L+  L +  + +    +  ++ S+G+ P+L   N 
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343

Query: 122 LINCLCKMGITS-GAFVVLGRILRS-CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           LI+  C  G+   G  + L R L+S   +P+ VT+N L++G C +G    A ++ K++  
Sbjct: 344 LIDGFC--GVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+ VT+  LI+   R+ N   A++L   M  E G    PDV TY+ +I G C  G 
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRSSM-EELG--LTPDVHTYSVLIHGFCIKGR 458

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +++A  L   M ++   PN + YN+++ G+C       A  LF EM +  + P+V ++  
Sbjct: 459 MNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
           MI   CK+ K  +   L+E MI  G+ P     N
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILN 552


>gi|414591629|tpg|DAA42200.1| TPA: hypothetical protein ZEAMMB73_531547 [Zea mays]
          Length = 462

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/479 (30%), Positives = 232/479 (48%), Gaps = 29/479 (6%)

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LCK G       V   +      P+  ++  ++NG   +G +++   LF  +     
Sbjct: 1   MGSLCKYGKIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 60

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++ TFN LI           A+ +F EM +      KP VVTY ++I  LC+ G +D 
Sbjct: 61  APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG---VKPHVVTYMTVIAALCRIGKMDD 117

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A E   QM D+ + P+   Y+ LI GFC      +AK L  E+M+NG++ D+V F ++IN
Sbjct: 118 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 177

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             CK G++     + +L +  G++PD V YN LMDG+CLVG++ +A  +F +MVS G   
Sbjct: 178 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 237

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +V                        EML + I+PS I YN ++ GLF+ G    A    
Sbjct: 238 NVVG----------------------EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 275

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M  + +  +  T++  + GL KN    EA+ +F+ +R    ++ I T N +I G+ + 
Sbjct: 276 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 335

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
            R++ A  LF  +   G +P  VT S MI  L KEG +++A D+   M+   C P     
Sbjct: 336 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 395

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
             ++R  ++ N+  +    L K+      +  L+ +  +VDL S     RE   Q R L
Sbjct: 396 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT-AMLLVDLFSSKGTCRE---QIRFL 450



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 221/463 (47%), Gaps = 27/463 (5%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           K G I  +  V  FD M     +P + S+TI+L   A       +  LF  +  +G+ PD
Sbjct: 6   KYGKIKEDRDV--FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 63

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           ++  N+LI      G+   A ++   +      P+ VT+  +I  LC  G++ +A   F 
Sbjct: 64  IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFN 123

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           ++      P+   ++ LI G C   + L A +L  E++N      + D+V + SII+ LC
Sbjct: 124 QMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG---MRLDIVFFGSIINNLC 180

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K G V  A+ +     +  ++P+ + YN L+ G+C V   ++A  +F  M+  G++P+VV
Sbjct: 181 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 240

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
                       G+          M+Q+G+ P T+ YN ++DG    GR   A+  F  M
Sbjct: 241 ------------GE----------MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 278

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
              G   +  +Y+I++    K++  ++A+ L++E+ +  ++  +IT NT+++G+FQ   +
Sbjct: 279 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 338

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
            +A  L   +  + +VP + T++  I  L K G V EA  +F +++N  CE      N +
Sbjct: 339 EEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHV 398

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
           +  L K   +  A     ++  +    + +T   ++     +G
Sbjct: 399 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 441



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/405 (22%), Positives = 175/405 (43%), Gaps = 16/405 (3%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
            FD M+    +P + +F +L+   A     D  + +F  +  +G+ P +     +I  LC
Sbjct: 51  LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 110

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           ++G    A     +++     P+   ++ LI G C  G +++A  L  ++       ++V
Sbjct: 111 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIV 170

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA---- 243
            F ++IN LC+    + A  +F+  VN       PD V YN ++DG C  G ++KA    
Sbjct: 171 FFGSIINNLCKLGRVMDAQNIFDLTVN---VGLHPDAVVYNMLMDGYCLVGKMEKALRVF 227

Query: 244 ---------KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
                      ++ +M  + I P+ I YN +I G         AK  F EM ++G+  + 
Sbjct: 228 DAMVSAGIEPNVVGEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 287

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
            T++ ++    K+   D+   L + +    V  D +T N+++ G     R+  A++LF S
Sbjct: 288 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 347

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           +   G      +Y+I+I    K+  VE+A  ++  M +    P     N ++  L +   
Sbjct: 348 ISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 407

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
           +  A   + K+   +   +  T    +D     G   E ++   A
Sbjct: 408 IVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPA 452


>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
 gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 238/474 (50%), Gaps = 4/474 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A  + + MI     P     T L+  L K+ +      + + +  +G  PD      L
Sbjct: 79  NDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFL 138

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +N LCK G    A  ++ ++    +  NTVT+N L+ GLC  G + ++ ++  K      
Sbjct: 139 VNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGL 198

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PNV T++ L+    + R    A++L +E+V + G   KP++V+YN ++ GLCK+G  ++
Sbjct: 199 VPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGG---KPNLVSYNVLLTGLCKEGRTEE 255

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +    +  +  +PNV++YN L+   C    W++AK L  EM      P +VTFN +I 
Sbjct: 256 AMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIG 315

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
                G+ D+   +L+ M +        +YN ++   C  G++    +    M+ + C  
Sbjct: 316 SLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNP 375

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           +  +YN  I   C++ KV++A  + + + +++   +   Y  ++S L + GN   A +L+
Sbjct: 376 NEGTYNA-IAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLL 434

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M     VPDS+T+++ I GLC  G + EA+++F  +    C   ++ +N LI GLCK 
Sbjct: 435 YEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKC 494

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
            +   +  +F  +  KG +P+  T + ++  +  + +M+ A  +L ++  +  V
Sbjct: 495 RKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELYLRQAV 548



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 231/456 (50%), Gaps = 5/456 (1%)

Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
           AF+ L  ++     P+      L+  LC   ++ +A ++ + +      P+  +   L+N
Sbjct: 81  AFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVN 140

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
            LC+  N   A++L E+M  E+G     + VTYNS++ GLC  G + ++ ++L +   + 
Sbjct: 141 NLCKRGNVGYAMQLVEKM-EEYGY--PTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKG 197

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + PNV TY+ L+          EA  L  E++  G +P++V++N ++   CK+G+ ++  
Sbjct: 198 LVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAM 257

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           +    +  +G +P+ V+YN L+   C  GR  +A+EL   M        + ++NILI + 
Sbjct: 258 QFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSL 317

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
               + + A+ +  +M   R + +  +YN +++ L + G +   +K +D+M      P+ 
Sbjct: 318 ALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNE 377

Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
            T+   I  LC+ G V EA  + Q++ N +     + Y  +I+ LC+ G    A +L + 
Sbjct: 378 GTYNA-IAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYE 436

Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
           +   G +PD  T S++I  LC EG +D+A ++   ME   C P    F  L+ G  +  +
Sbjct: 437 MTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCK-CR 495

Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           K+ + +++ +M  +K  + + +  + +V+ ++  ++
Sbjct: 496 KTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEE 531



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 216/461 (46%), Gaps = 4/461 (0%)

Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
           G  PD      L+  LCK      A  V+  ++ S  TP+  +  FL+N LC  G +  A
Sbjct: 92  GHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYA 151

Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
            +L +K+  +    N VT+N+L+ GLC   N   +L++ ++ + + G +  P+V TY+ +
Sbjct: 152 MQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKK-GLV--PNVFTYSFL 208

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           ++   K+   D+A  LL ++  +   PN+++YN L+ G C     +EA   F ++   G 
Sbjct: 209 LEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGF 268

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
            P+VV++N ++   C +G+ +K   LL  M     +P  VT+N L+    L G+  +A E
Sbjct: 269 SPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALE 328

Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
           +   M     +    SYN +I   CK+ KV+  V    +M+  R  P+  TYN + + L 
Sbjct: 329 VLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAI-AVLC 387

Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
           + G + +A  +I  +           +   I  LC+ G    A Q+   +          
Sbjct: 388 EEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSY 447

Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
           TY+ LI GLC  G L  A ++F  ++     PDV   + +I  LCK  + D +  +   M
Sbjct: 448 TYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMM 507

Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
             K  +P+E T+  ++ G     +      +L ++   + V
Sbjct: 508 VKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELYLRQAV 548



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 149/309 (48%), Gaps = 13/309 (4%)

Query: 304 NCKDGKMDKVNR---------LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           N + GK D   R          LE MI +G  PD      LM   C   ++ +A ++   
Sbjct: 63  NWRSGKNDPRTRDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMEL 122

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           M+  G   D  S   L+N  CK   V  A+ L  +M       + +TYN+L+ GL   GN
Sbjct: 123 MIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGN 182

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           L  +L+++DK     +VP+ FT++  ++   K     EA+++   I     +  + +YN 
Sbjct: 183 LSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNV 242

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           L+ GLCK GR + A + F  L  KG  P+VV+ + ++  LC EG+ +KA +LL +M+   
Sbjct: 243 LLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGE 302

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR-- 592
             PS VTF  L+     + +  + + +L  M+  +   +  S +  ++  L K+ K    
Sbjct: 303 RSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNP-IIARLCKEGKVDLV 361

Query: 593 -ECLNQFRH 600
            +CL+Q  +
Sbjct: 362 VKCLDQMMY 370


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 254/553 (45%), Gaps = 43/553 (7%)

Query: 82  TSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGR 141
           TS+ I +   +  +Q+ T V L + + + G+ PD+   N  I    K G    A  +L +
Sbjct: 111 TSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQ 170

Query: 142 ILRSC--FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
           ++      TP+ VT+N  I      GR  EA  L +++      PN++T+N+ I    + 
Sbjct: 171 MVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKG 230

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
           R    A+ L EE++ +      P   TYN +ID   K G   +A +LL QM   +I  +V
Sbjct: 231 RRWEEAMDLLEEVIEQG---FPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADV 287

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA-------------------- 299
           I+Y+S+I        WKEA  L  +M   GV P+V+++N+                    
Sbjct: 288 ISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLRE 347

Query: 300 ---------MINYNCK------DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
                    +I+YN        +G+  +   LL+ M  +G+ P+T++YNS +D     G+
Sbjct: 348 MTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQ 407

Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
             +A +L   M + G   D+ S+N  I+A  + Q+ E AV L REM +  + P+VITYN+
Sbjct: 408 WEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNS 467

Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE-AVQVFQAIRNC 463
            +    +     +A+ L  +M    + P+  T+ + ID  C  G   E AVQ+   +   
Sbjct: 468 AIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDA-CAKGEQWELAVQLLTGMPAR 526

Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
                + +YN  I    K  + + A +L   +  +GP PD+++ ++ +    K G+  +A
Sbjct: 527 GVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREA 586

Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
             LL DM      P+ V++   +    +  +    V +L +M        +L   S  +D
Sbjct: 587 LGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHG-ATPNLITYSAAID 645

Query: 584 LLSKDKKYRECLN 596
             +K  +++E ++
Sbjct: 646 ACAKQGRWKEAVD 658



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 216/482 (44%), Gaps = 34/482 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+   + M+     P + ++   +   AK ++++  + L + +   G  P     N +I
Sbjct: 200 EAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVI 259

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR-IMEAARLFKKLNVFAC 182
           +   K G    A  +LG++L +    + ++++ +I   C  GR   EA  L +++     
Sbjct: 260 DACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVI-AACGRGRRWKEAMDLLEQMRTQGV 318

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMV-----------NEFGAICK---------- 221
            PNV+++N+ I+   +      AL L  EM            N   A C           
Sbjct: 319 SPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALE 378

Query: 222 -----------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
                      P+ ++YNS +D   K G  +KA +LL  M     +P++I++NS I    
Sbjct: 379 LLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACG 438

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
               W+ A  L  EM   G+ P+V+T+N+ I    +  +  +   L   M  RG++P+ V
Sbjct: 439 RGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVV 498

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TYNS++D      +   A +L   M ++G   DV SYN  I A  K ++ E A+ L + M
Sbjct: 499 TYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGM 558

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
            +   +P +I+YN+ ++   + G   +AL L+  M    + P++ ++   I    K    
Sbjct: 559 PTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQW 618

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
             AV++ + ++       + TY+  I+   K GR K A  L   L+ +G  PD  T  T+
Sbjct: 619 DVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTV 678

Query: 511 IH 512
           I 
Sbjct: 679 IS 680



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 216/489 (44%), Gaps = 41/489 (8%)

Query: 150 NTVTFNFLINGLCAEGRIMEAA-RLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
           +T ++N  I   C+ GR    A RL +++      P+VVT+N+ I    +      A+ L
Sbjct: 109 DTTSYNIAI-AACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDL 167

Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
             +MV     I  PDVVTYNS I      G   +A +LL QM  + + PN+ITYNS I  
Sbjct: 168 LTQMVAPTEGIT-PDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGA 226

Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK----MDKVNR--------- 315
                 W+EA  L  E+++ G  P   T+N +I+   K G+    MD + +         
Sbjct: 227 CAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPAD 286

Query: 316 ----------------------LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
                                 LLE M  +GV+P+ ++YNS +D      R   A +L  
Sbjct: 287 VISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLR 346

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M + G    V SYN    A   + +  +A+ L +EM ++ I P+ I+YN+ L    + G
Sbjct: 347 EMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGG 406

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE-AVQVFQAIRNCKCELRIETY 472
               A+KL+  M      PD  +F + ID  C  G   E AV++ + +        + TY
Sbjct: 407 QWEKAVKLLRGMSTVGSDPDIISFNSAIDA-CGRGQQWETAVELLREMPTAGLTPNVITY 465

Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
           N  I    +  R + A  LF  +  +G  P+VVT ++MI    K  Q + A  LL  M A
Sbjct: 466 NSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPA 525

Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
           +   P  +++ + +    +  +    + LL  M         +S +S V    +K  ++R
Sbjct: 526 RGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVT-ACAKSGRWR 584

Query: 593 ECLNQFRHL 601
           E L   + +
Sbjct: 585 EALGLLKDM 593



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 147/316 (46%), Gaps = 5/316 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+     M     +P   S+   L   AK  Q++  V L + +++ G  PD+   N  I
Sbjct: 375 EALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAI 434

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           +   +      A  +L  +  +  TPN +T+N  I       R  EA  LF+++      
Sbjct: 435 DACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLS 494

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNVVT+N++I+   +     +A++L   M     A   PDV++YNS I+   K    + A
Sbjct: 495 PNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVA---PDVISYNSAIEACGKGEQWELA 551

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +LL  M  R   P++I+YNS +        W+EA  L  +M   G+ P+ V++ A I+ 
Sbjct: 552 LQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHA 611

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K  + D   R+L+ M   G  P+ +TY++ +D     GR   A +L   +  +G   D
Sbjct: 612 CGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPD 671

Query: 364 VYSYNILINA--NCKD 377
             +Y  +I+A   C D
Sbjct: 672 AQTYLTVISAFQRCSD 687


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 238/503 (47%), Gaps = 46/503 (9%)

Query: 73  IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
           + + PSP   +   LL +            L ++  +  +FP  F+ +++I+  CK G  
Sbjct: 18  LHLPPSPD-AAHAQLLALHESGDANAAARFLREKTAAGSIFPG-FLSSVVIDRACKSGDL 75

Query: 133 SGAFVVLGRILRS-CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
            GA ++L  +L S    PN   F  LI+ L    R+ +AAR  + +      P+VVTF  
Sbjct: 76  RGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTV 135

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           +I G C+ R    A ++F+EM+      C+PD   Y  +IDG CK+  +D+A ELL +M+
Sbjct: 136 MIRGFCKNRMMERAWEIFQEMIKS--NRCQPDCFLYGVLIDGYCKELRMDRALELLREMR 193

Query: 252 -DRNINPNVITYNSLICGFCCVDDWKEA-KCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
            +R I P+V+ YNS++ G C  + + EA K L   M+  G  P VVT+ ++I   CK  K
Sbjct: 194 VERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKK 253

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           M    R+   M++R + P  V+Y+ ++DG    GR+  A  +   M + GC  +V  Y  
Sbjct: 254 MKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTT 313

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL----------------------- 406
           LI+  CK   ++DA  LYR M      P+  TY TL+                       
Sbjct: 314 LIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYC 373

Query: 407 -----------SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
                      SGL +   L DA  L  +M+L  V  D+  +   + G  ++    EA +
Sbjct: 374 PLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFR 433

Query: 456 VFQAI-RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL 514
           + + +  +  C   + TYN +I G C    L++   LF+ ++ +G  PD  T S +I  L
Sbjct: 434 ILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRL 489

Query: 515 CKEGQMDKANDLLLDMEAKNCVP 537
              G++ +A DL  +M A    P
Sbjct: 490 LGSGEIGRAFDLCEEMLASGLSP 512



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 219/432 (50%), Gaps = 10/432 (2%)

Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFK-KLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
           +P+      L   L   G    AAR  + K    +  P  ++ + +I+  C++ +   AL
Sbjct: 23  SPDAAHAQLL--ALHESGDANAAARFLREKTAAGSIFPGFLS-SVVIDRACKSGDLRGAL 79

Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
            +   M++       P+   + S+ID L K   +  A   L  M+D  I+P+V+T+  +I
Sbjct: 80  LILATMLHS--GTPPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMI 137

Query: 267 CGFCCVDDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLL-ELMIQRG 324
            GFC     + A  +F EM+  N  QPD   +  +I+  CK+ +MD+   LL E+ ++R 
Sbjct: 138 RGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERR 197

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELF-VSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           + PD V YNS++DG C   R   A +    +MV +GC   V +Y  LI   CK +K++ A
Sbjct: 198 IQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLA 257

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           V ++  ML  +I+P++++Y+ ++ GL + G + DA +++ +M+      +   + T IDG
Sbjct: 258 VRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDG 317

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LCK+GF+ +A  +++ ++         TY  LI+  C+  R +TA  LF  ++   P+ D
Sbjct: 318 LCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPL-D 376

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           V   + ++  LC+E ++D A  L  +M           +  LL G  ++ +  +   +L 
Sbjct: 377 VAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILE 436

Query: 564 KMAAEKLVVSDL 575
           ++  +   V++L
Sbjct: 437 ELGDDPGCVANL 448



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 15/284 (5%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           AV  ++ M++ K  P + S+++++  L+K  +      + + + + G   ++ +   LI+
Sbjct: 257 AVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLID 316

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
            LCK G    A+ +   + RS   PN  T+  LI+  C   R   A  LF  +  + C  
Sbjct: 317 GLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CPL 375

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           +V  +  +++GLCR R    A  LF EM     A    D   YN ++ G  +    ++A 
Sbjct: 376 DVAMYTAVVSGLCRERRLDDARALFREMRL---AGVSADTHAYNVLLHGAFRSERPEEAF 432

Query: 245 ELLLQMKDRNINP----NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
            +L ++ D   +P    N++TYN++I G CC++       LF EM   G+ PD  T++A+
Sbjct: 433 RILEELGD---DPGCVANLLTYNTVIAG-CCLE---SGMVLFYEMRQRGIAPDFATYSAL 485

Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
           I+     G++ +   L E M+  G++P +     ++   C   R
Sbjct: 486 IDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRR 529



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 5/238 (2%)

Query: 368 NILINANCKDQKVEDAVCLYREML-SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           +++I+  CK   +  A+ +   ML S    P+   + +L+  L +   L DA + ++ M+
Sbjct: 63  SVVIDRACKSGDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMR 122

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA-IRNCKCELRIETYNCLINGLCKMGRL 485
              + PD  TF   I G CKN  +  A ++FQ  I++ +C+     Y  LI+G CK  R+
Sbjct: 123 DAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRM 182

Query: 486 KTACKLFHRLQHKGPI-PDVVTCSTMIHWLCKEGQMDKANDLLLD-MEAKNCVPSEVTFC 543
             A +L   ++ +  I PDVV  ++++  LC+  +  +A   L + M  + C P+ VT+ 
Sbjct: 183 DRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYT 242

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           +L+RG  +  KK K+ V +     E+ +   +   S ++D LSK  +  +     R +
Sbjct: 243 SLIRGACK-AKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREM 299


>gi|357442909|ref|XP_003591732.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480780|gb|AES61983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 344

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/355 (35%), Positives = 194/355 (54%), Gaps = 22/355 (6%)

Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
           G +   DVV YN+IIDGLCKD  V+ A EL  +M    I+P+V T+NSLI GFC +   K
Sbjct: 10  GKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLK 69

Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
           +A  LF +M+   + P V TF  +++  CK+GKM +   ++ +M++ GV P+ VTY S+M
Sbjct: 70  DAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIM 129

Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
           +G+CLV  +++ + +F ++   G   +  SYNI+IN  CK + V +A+ L++EM    I 
Sbjct: 130 EGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIV 189

Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
           P  +TY++L+ GL +   LG  L     M  + + P +     YID LCK+  + +A+ +
Sbjct: 190 PITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLT---VLYIDALCKSNHLDKAIAL 246

Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
            + I++                    GRLK A  +F  L  KG   ++ T + MI+ LCK
Sbjct: 247 VKKIKD-------------------QGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCK 287

Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
           EG  D+A  LL  M+    +P  VT+ T +R     ++  K   L  KM A  L+
Sbjct: 288 EGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEKAEKLFRKMIARGLL 342



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 164/324 (50%), Gaps = 16/324 (4%)

Query: 115 DLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLF 174
           D+ + N +I+ LCK  + + A+ +   ++    +P+  TFN LI G C  G++ +A  LF
Sbjct: 16  DVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLF 75

Query: 175 KKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGL 234
            ++ +   +P+V TF  L++GLC+      A  +   M+ + G +  P+VVTY SI++G 
Sbjct: 76  SQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKD-GVL--PNVVTYTSIMEGY 132

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           C    V+K K +   +    + PN  +YN +I GFC +    EA  LF EM   G+ P  
Sbjct: 133 CLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPIT 192

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY-------NSLMDGFCLV----- 342
           VT++++I+  CK   +  +     LM+   + P TV Y       N L     LV     
Sbjct: 193 VTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLYIDALCKSNHLDKAIALVKKIKD 252

Query: 343 -GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            GR+  A+++F  ++ KG   ++ +YNI+IN  CK+   ++A  L  +M    I P  +T
Sbjct: 253 QGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPDAVT 312

Query: 402 YNTLLSGLFQVGNLGDALKLIDKM 425
           Y T +  LF       A KL  KM
Sbjct: 313 YETNIRALFHKDENEKAEKLFRKM 336



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 144/313 (46%), Gaps = 22/313 (7%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           N+A   +  MI  K SP + +F  L+       Q      LF ++    + P ++   +L
Sbjct: 34  NDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKNINPSVYTFTIL 93

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           ++ LCK G    A  V+  +++    PN VT+  ++ G C    + +   +F+ ++    
Sbjct: 94  VDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRMGV 153

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK---PDVVTYNSIIDGLCKDGF 239
            PN  ++N +ING C+ +    AL LF+EM       C+   P  VTY+S+IDGLCK   
Sbjct: 154 APNTQSYNIMINGFCKIKIVNEALILFKEMC------CRGIVPITVTYSSLIDGLCKSTM 207

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD-------------WKEAKCLFIEMM 286
           +       + M +  I P  + Y   +C    +D               K A+ +F +++
Sbjct: 208 LGSLLMRCMLMVNHLIYPLTVLYIDALCKSNHLDKAIALVKKIKDQGRLKNAQDVFQDLL 267

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
             G   ++ T+N MIN  CK+G  D+   LL  M   G+ PD VTY + +          
Sbjct: 268 IKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENE 327

Query: 347 RARELFVSMVSKG 359
           +A +LF  M+++G
Sbjct: 328 KAEKLFRKMIARG 340



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 40/245 (16%)

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV  YN +I+  CKD+ V DA  LY EM++E+I P V T+N+L+ G   +G L DA  L 
Sbjct: 16  DVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLF 75

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
            +M L ++ P  +TF                                     L++GLCK 
Sbjct: 76  SQMVLKNINPSVYTFTI-----------------------------------LVDGLCKE 100

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G++K A  +   +   G +P+VVT ++++   C   +++K   +   +      P+  ++
Sbjct: 101 GKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSY 160

Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKK----YRECLNQF 598
             ++ GF +    ++ ++L  +M    +V   ++ SS ++D L K          C+   
Sbjct: 161 NIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSS-LIDGLCKSTMLGSLLMRCMLMV 219

Query: 599 RHLLF 603
            HL++
Sbjct: 220 NHLIY 224



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 45/272 (16%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A   F  M+    +P + +FTIL+  L K  +     S+   +  +G+ P++     ++
Sbjct: 70  DAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIM 129

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
              C +   +    V   I R    PNT ++N +ING C    + EA  LFK++      
Sbjct: 130 EGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIV 189

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF---------GAICKPD----------- 223
           P  VT+++LI+GLC++      L     MVN            A+CK +           
Sbjct: 190 PITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLYIDALCKSNHLDKAIALVKK 249

Query: 224 -------------------------VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                                    + TYN +I+GLCK+G  D+A+ LL +M D  I P+
Sbjct: 250 IKDQGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPD 309

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
            +TY + I      D+ ++A+ LF +M+  G+
Sbjct: 310 AVTYETNIRALFHKDENEKAEKLFRKMIARGL 341



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 75/135 (55%)

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           D+++   V  D   + T IDGLCK+  V +A +++  +   K    + T+N LI G C +
Sbjct: 6   DQIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCII 65

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
           G+LK A  LF ++  K   P V T + ++  LCKEG+M +A  ++  M     +P+ VT+
Sbjct: 66  GQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTY 125

Query: 543 CTLLRGFVQNNKKSK 557
            +++ G+   N+ +K
Sbjct: 126 TSIMEGYCLVNEVNK 140


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 272/532 (51%), Gaps = 10/532 (1%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           S  +  NE V  F+     K SP  T F ++L +  +       + +F  +   G  P L
Sbjct: 129 SSLVVWNELVRVFE---DFKFSP--TVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSL 183

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
              N L++ L + G +S A +V   I R    P+  T + ++N  C +G +  A    K+
Sbjct: 184 RSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKE 243

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           ++    + NVVT+N+LI+G C +   +   ++  +++ E G +   + VT   +I G C+
Sbjct: 244 MDYLGFELNVVTYNSLIDG-CVSIGDMERAEMVLKLMGERGIL--RNKVTLTLLIKGYCR 300

Query: 237 DGFVDKAKELLLQM-KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
              +++A+++L +M +   +  +   Y  LI G+C V    +A  L  EM++ G++ ++ 
Sbjct: 301 QCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLF 360

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
             NA+IN  CK+G++ +  RLL  M+   + P++ +Y++LMDGFC  G +++A  ++  M
Sbjct: 361 ICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEM 420

Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
           +  G + +V ++N L+   C+    EDA+ ++  ML   + P  ++Y TLL  LF++G  
Sbjct: 421 LRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEF 480

Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
             AL L + +        ++ F T I+G CK   ++EA + F  ++    E    TY  L
Sbjct: 481 FRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTL 540

Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
           I+G CK+G ++ A K+  +++ +  +P +   +++I  L K  +  +  DLL +M  K  
Sbjct: 541 IDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGL 600

Query: 536 VPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK 587
            P+ VT+ TL+ G+    +  K       M  EK    ++ + SK+V  L +
Sbjct: 601 SPNVVTYGTLIAGWCDEGRLDKAFTAYFDM-IEKGFAPNVIICSKIVSSLYR 651



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 253/505 (50%), Gaps = 9/505 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+  ++ M+++     + +   LL  L +   ++  + ++  +   G+ PD      L+
Sbjct: 412 KAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLL 471

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + L KMG    A  +   IL   +  +T  FN +ING C   +++EA   F ++     +
Sbjct: 472 DLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFE 531

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+ TLI+G C+  N   A K+ E+M  E  AI  P +  YNS+I GL K     + 
Sbjct: 532 PDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKE--AIL-PSIELYNSLIGGLFKSKKTREV 588

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            +LL +M  + ++PNV+TY +LI G+C      +A   + +M++ G  P+V+  + +++ 
Sbjct: 589 MDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSS 648

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM---DGFCLVGRISRARELFVSMVSKGC 360
             + G++D+ N LL+ M+   V  D   ++ L    DG     +I  A  L  S  S   
Sbjct: 649 LYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKI--ADTLDESSKSFSL 706

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
            + V  YNI I   CK  KV+DA  ++  +L     P   TY TL+ G    GN+ DA  
Sbjct: 707 PNSVV-YNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFS 765

Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           L D+M    + P+  T+   I+GLCK+G +  A ++F  +        + +YN LI+G C
Sbjct: 766 LRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYC 825

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
           K G  + A  L +++  +G  P ++T S +I+  CK+G M KA +LL +M       +  
Sbjct: 826 KNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIA 885

Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKM 565
            F  L+ G V+  +  K+  L + M
Sbjct: 886 KFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 245/501 (48%), Gaps = 2/501 (0%)

Query: 65  AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
           A++ FD M K+   P + S   LL+ L +  +    + ++  +N  G+ PD+F  ++++N
Sbjct: 167 ALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVN 226

Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
             CK G  + A   +  +    F  N VT+N LI+G  + G +  A  + K +       
Sbjct: 227 AYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILR 286

Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
           N VT   LI G CR      A K+  EM    G +   D   Y  +IDG C+   +D A 
Sbjct: 287 NKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVL--DEYAYGVLIDGYCRVCKMDDAV 344

Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
            L  +M +  +  N+   N+LI G+C      EA+ L + M+D  ++P+  +++ +++  
Sbjct: 345 RLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGF 404

Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
           C++G + K   +   M++ G+  + VT+NSL+ G C VG    A  ++  M+ +G   D 
Sbjct: 405 CREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDE 464

Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
            SY  L++   K  +   A+ L+ ++L+     S   +NT+++G  ++  + +A +  ++
Sbjct: 465 VSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNR 524

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
           M+     PD  T+ T IDG CK G V EA +V + +        IE YN LI GL K  +
Sbjct: 525 MKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKK 584

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
            +    L   +  KG  P+VVT  T+I   C EG++DKA     DM  K   P+ +    
Sbjct: 585 TREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSK 644

Query: 545 LLRGFVQNNKKSKVVVLLHKM 565
           ++    +  +  +  +LL KM
Sbjct: 645 IVSSLYRLGRIDEANMLLQKM 665



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 225/482 (46%), Gaps = 38/482 (7%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A++ +  M+K   +P   S+  LL +L K  ++   ++L+  + + G     +  N +I
Sbjct: 447 DALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMI 506

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  CKM     A     R+    F P+ VT+  LI+G C  G + EA ++ +K+   A  
Sbjct: 507 NGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAIL 566

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++  +N+LI GL +++ T   + L  EM  +      P+VVTY ++I G C +G +DKA
Sbjct: 567 PSIELYNSLIGGLFKSKKTREVMDLLSEMCLKG---LSPNVVTYGTLIAGWCDEGRLDKA 623

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM------MDNGV------- 290
                 M ++   PNVI  + ++     +    EA  L  +M      +D+G        
Sbjct: 624 FTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKA 683

Query: 291 ----------------------QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
                                  P+ V +N  I   CK GK+D   ++   ++ RG +PD
Sbjct: 684 DDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPD 743

Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
             TY +L+ G+   G ++ A  L   M+ +G   ++ +YN LIN  CK   ++ A  L+ 
Sbjct: 744 NFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFD 803

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           ++  + + P+VI+YN L+ G  + GN  +AL L +KM    + P   T++  I G CK G
Sbjct: 804 KLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQG 863

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
            + +A  +   +R    +  I  +  L+ G  K G +K   KL + +    P   V++  
Sbjct: 864 DMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHITIPCAGVISHK 923

Query: 509 TM 510
            M
Sbjct: 924 QM 925



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 205/447 (45%), Gaps = 55/447 (12%)

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
           +S F PN       +N  C    I+  AR++        D      N L+     ++N  
Sbjct: 87  QSNFRPN-------VNSHCKLVHILSRARMY--------DETRSYLNELVTP---SKNNY 128

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            +L ++ E+V  F    K     ++ I+   C+ G +  A  +   M      P++ + N
Sbjct: 129 SSLVVWNELVRVFEDF-KFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCN 187

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            L+       +   A  ++  +   G+ PDV T + M+N  CKDG ++     ++ M   
Sbjct: 188 RLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYL 247

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG---------------CRH------ 362
           G   + VTYNSL+DG   +G + RA  +   M  +G               CR       
Sbjct: 248 GFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEA 307

Query: 363 ---------------DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
                          D Y+Y +LI+  C+  K++DAV L  EML+  +R ++   N L++
Sbjct: 308 EKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALIN 367

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
           G  + G + +A +L+ +M   D+ P+S++++T +DG C+ G V +A+ V+  +     + 
Sbjct: 368 GYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQS 427

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
            + T+N L+ GLC++G  + A  ++H +  +G  PD V+  T++  L K G+  +A  L 
Sbjct: 428 NVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALW 487

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            D+ A+    S   F T++ GF +  K
Sbjct: 488 NDILARGYGRSTYAFNTMINGFCKMEK 514



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 181/388 (46%), Gaps = 11/388 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           DG +    ++   K GN+   EA    + M K    P +  +  L+  L K+K+   V+ 
Sbjct: 533 DGVTYRTLIDGYCKLGNV--EEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMD 590

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           L   +   GL P++     LI   C  G    AF     ++   F PN +  + +++ L 
Sbjct: 591 LLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLY 650

Query: 163 AEGRIMEAARLFKK---LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI 219
             GRI EA  L +K   L+VF         +   +G       L + K+ + +     + 
Sbjct: 651 RLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDG------NLDSQKIADTLDESSKSF 704

Query: 220 CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
             P+ V YN  I GLCK G VD AK++   +  R  +P+  TY +LI G+    +  +A 
Sbjct: 705 SLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAF 764

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            L  EM+  G+ P+++T+NA+IN  CK G +D+  +L + +  +G+ P+ ++YN L+DG+
Sbjct: 765 SLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGY 824

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  G    A +L   M+ +G    + +Y+ LI   CK   +  A  L  EM       ++
Sbjct: 825 CKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNI 884

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             +  L+ G  + G +    KL + M +
Sbjct: 885 AKFVKLVEGHVKCGEVKKIAKLHNMMHI 912


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 243/499 (48%), Gaps = 8/499 (1%)

Query: 68  FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           FF  M+K        S+ ILL  L      D  +     +  +G+ PD+   N L     
Sbjct: 293 FFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFL 352

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
            +G+ SGA  V+ ++L     P+ VT+  LI G C  G I EA +L ++        NV+
Sbjct: 353 LLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVI 412

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
            +N L++ LC+      AL LF+EM        +PD + Y+ +I GLCK+GFV +A +L 
Sbjct: 413 FYNMLLSCLCKVGRIEEALTLFDEMET---LRLEPDFIVYSILIHGLCKEGFVQRAYQLY 469

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            QM+ +   P+     +++ G     +  EA+  F       +  DVV +N MI+   + 
Sbjct: 470 EQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRL 529

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
             + +  +L   MI+RG+ P  VT+N+L++GFC  G +  AR++   +  KG    V +Y
Sbjct: 530 DGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTY 589

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             L+NA C+   +++      EM +  + P+ +TY  L+ GL +   + ++L+L++ M  
Sbjct: 590 TTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYA 649

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
             ++PDS T+ T I   CK   + +A+Q++  +    C+    TY  LIN LC  G LK 
Sbjct: 650 KGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKD 709

Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL- 546
             ++   ++ +      VT  T+I   C +GQ+ KA      M AK  V S   +  ++ 
Sbjct: 710 VDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVIN 769

Query: 547 ----RGFVQNNKKSKVVVL 561
               RG +   K   V++L
Sbjct: 770 RLCKRGLITEAKYFFVMML 788



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 231/451 (51%), Gaps = 5/451 (1%)

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T + LI+GLC + ++ +A       N     P++V+ NT+++  C+     VA   F  M
Sbjct: 239 TTSILIHGLCEQSKLEDAISFLHDSNK-VVGPSIVSINTIMSKFCKVGLIDVARSFFCLM 297

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           V   G +   D  +YN ++ GLC  G +D+A      M+   + P+V+TYN+L  GF  +
Sbjct: 298 VKN-GLL--HDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLL 354

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                A+ +  +M+  G+ PD+VT+  +I  +C+ G +++  +L +  + RG   + + Y
Sbjct: 355 GLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFY 414

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N L+   C VGRI  A  LF  M +     D   Y+ILI+  CK+  V+ A  LY +M  
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRL 474

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           +R  P       +L GLF+ GN+ +A    D     D++ D   +   IDG  +   + E
Sbjct: 475 KRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAE 534

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A+Q++  +        + T+N LING C+ G L  A K+   ++ KG +P VVT +T+++
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMN 594

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             C+ G M +    L +MEA   VP+ VT+  L++G  + NK  + + LL  M A+ L+ 
Sbjct: 595 AYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLP 654

Query: 573 SDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
             ++ ++ ++    K K+  + L  +  +L 
Sbjct: 655 DSVTYNT-IIQCFCKGKEITKALQLYNMMLL 684



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 248/495 (50%), Gaps = 12/495 (2%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D ++  F+  +SNGL     V ++L     +  +   A  V+ ++    F  +  T+N L
Sbjct: 157 DLLLEKFRNWDSNGL-----VWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSL 211

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           ++ +     + +   ++ ++ V     +  T + LI+GLC       A+      +++  
Sbjct: 212 LHNMRHTDIMWD---VYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISF----LHDSN 264

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
            +  P +V+ N+I+   CK G +D A+     M    +  +  +YN L+ G C      E
Sbjct: 265 KVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDE 324

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A     +M  +GV+PDVVT+N +       G M    ++++ M+ +G+NPD VTY +L+ 
Sbjct: 325 ALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLIC 384

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C +G I  A +L    +S+G + +V  YN+L++  CK  ++E+A+ L+ EM + R+ P
Sbjct: 385 GHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
             I Y+ L+ GL + G +  A +L ++M+L    P  F     + GL KNG + EA   F
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYF 504

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
                      +  YN +I+G  ++  +  A +L++++  +G  P VVT +T+I+  C+ 
Sbjct: 505 DTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRR 564

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G + +A  +L  +  K  VPS VT+ TL+  + +     ++   LH+M A  +V + ++ 
Sbjct: 565 GDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTY 624

Query: 578 SSKVVDLLSKDKKYR 592
           +  +  L  ++K + 
Sbjct: 625 TVLIKGLCRQNKMHE 639



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 224/488 (45%), Gaps = 32/488 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+ F D M K    P + ++  L               + +++   GL PDL     L
Sbjct: 323 DEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTL 382

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+MG    A  +    L   F  N + +N L++ LC  GRI EA  LF ++     
Sbjct: 383 ICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRL 442

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMV----------------------------N 214
           +P+ + ++ LI+GLC+      A +L+E+M                             N
Sbjct: 443 EPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARN 502

Query: 215 EFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
            F    +     DVV YN +IDG  +   + +A +L  +M +R I P+V+T+N+LI GFC
Sbjct: 503 YFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFC 562

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
              D  EA+ +   +   G+ P VVT+  ++N  C+ G M ++   L  M    V P  V
Sbjct: 563 RRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHV 622

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TY  L+ G C   ++  + +L   M +KG   D  +YN +I   CK +++  A+ LY  M
Sbjct: 623 TYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMM 682

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           L     P+ +TY  L++ L   G+L D  +++  ++  ++     T+ T I   C  G V
Sbjct: 683 LLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQV 742

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            +A+  F  +      + I  Y+ +IN LCK G +  A   F  +  +G  PD   C T+
Sbjct: 743 SKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTV 802

Query: 511 IHWLCKEG 518
           ++   ++G
Sbjct: 803 LNAFHQQG 810



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 244/501 (48%), Gaps = 13/501 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + S   +++   K    D   S F  +  NGL  D F  N+L++ LC  G    A  
Sbjct: 268 GPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALG 327

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
               + +    P+ VT+N L  G    G +  A ++ +K+ +   +P++VT+ TLI G C
Sbjct: 328 FTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHC 387

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  N   ALKL +E ++      K +V+ YN ++  LCK G +++A  L  +M+   + P
Sbjct: 388 QMGNIEEALKLRQETLSRG---FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + I Y+ LI G C     + A  L+ +M      P      A++    K+G + +     
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYF 504

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           +   +  +  D V YN ++DG+  +  I+ A +L+  M+ +G    V ++N LIN  C+ 
Sbjct: 505 DTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRR 564

Query: 378 QKVEDAVCLYREMLSERIR-----PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             + +A    R+ML E IR     PSV+TY TL++   +VGN+ +    + +M+ N VVP
Sbjct: 565 GDLMEA----RKML-EVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVP 619

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
              T+   I GLC+   + E++Q+ + +          TYN +I   CK   +  A +L+
Sbjct: 620 THVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLY 679

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           + +      P  VT   +I+ LC  G +   + +++ +E +N    +VT+ T+++     
Sbjct: 680 NMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAK 739

Query: 553 NKKSKVVVLLHKMAAEKLVVS 573
            + SK +   ++M A+  V+S
Sbjct: 740 GQVSKALGYFNQMLAKGFVIS 760



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 3/296 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  MI+   +P + +F  L+    +         + + +   GL P +     L+
Sbjct: 534 EAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  C++G     F  L  +  +   P  VT+  LI GLC + ++ E+ +L + +      
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL 653

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+NT+I   C+ +    AL+L+  M+      C P  VTY  +I+ LC  G +   
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMMLLHN---CDPTQVTYKVLINALCIFGDLKDV 710

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +++ ++DRNI    +TY ++I   C      +A   F +M+  G    +  ++A+IN 
Sbjct: 711 DRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINR 770

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
            CK G + +      +M+  GV PD     ++++ F   G  S   E    +V  G
Sbjct: 771 LCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 230/446 (51%), Gaps = 16/446 (3%)

Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNV 179
           N L+   C+ G  + A  VLG   R+    N VT+  LI+G C  GR+ +A RL   + V
Sbjct: 128 NTLVAGYCRDGRLADAERVLG-AARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPV 186

Query: 180 FACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF 239
               P+  T+NT++ GLC  +    A +L  EM+      C P+ VT+ + I   C++G 
Sbjct: 187 A---PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNR---CPPNEVTFATQIRSFCQNGL 240

Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
           +D+A +LL QM      P+V+ Y++LI GF       +A  L   M+    +P+ V +NA
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 297

Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
            +   C   + + +  L+  M+++G +P+  T++ L+   C    +  A E+   M   G
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
           C  D  +YNI+IN+  +  +V+DA+ L   M+    +P  + +N +L G  +     DA 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDAS 414

Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
           +LI +M  +D      TF   ID LC+NG V  A QVF+ +   +C   I TY+ L+NG 
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
            + G ++ A +LF  +  K   PD+ + + ++  LC+  + + A +L+ +M  K+C P+E
Sbjct: 475 SEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKM 565
           VTF  L+    Q     + + +L +M
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQM 557



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 230/494 (46%), Gaps = 47/494 (9%)

Query: 81  MTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLG 140
           + ++T L+    ++ + D  + L   + S  + PD +  N ++  LC       A  ++ 
Sbjct: 158 VVTYTALIDGYCRSGRLDDALRL---IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMA 214

Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
            ++R+   PN VTF   I   C  G +  A +L  ++  + C P+VV ++TLING     
Sbjct: 215 EMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQG 274

Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
           +   AL L   M      +CKP+ V YN+ + GLC     +   EL+ +M  +  +PN  
Sbjct: 275 HVDQALDLLNTM------LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEA 328

Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
           T++ LI   C  +    A  +  +M   G +PD V +N +IN   + G++D   RLL  M
Sbjct: 329 TFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM 388

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
           +     PD + +N+++ GFC   R   A EL   M    C     ++NILI+  C++  V
Sbjct: 389 V---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLV 445

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVG--------------------------- 413
             A  ++ +M   R  P ++TY++LL+G  + G                           
Sbjct: 446 NYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKG 505

Query: 414 -----NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
                   DA +LI +M   D  P+  TF   I+ LC+ G V  A++V + + N      
Sbjct: 506 LCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 565

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
           I TYN LING  + GRL  A KL   +  K   PD ++ ++ +  LC+  +   A +L+ 
Sbjct: 566 IFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVA 622

Query: 529 DMEAKNCVPSEVTF 542
           +M    C P+EVTF
Sbjct: 623 EMLRNKCTPNEVTF 636



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 224/442 (50%), Gaps = 15/442 (3%)

Query: 73  IKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT 132
           I+ +  P   +F   +    +N   D  V L  ++   G  PD+ + + LIN   + G  
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 276

Query: 133 SGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTL 192
             A  +L  +L     PNTV +N  + GLC   R  +   L  ++    C PN  TF+ L
Sbjct: 277 DQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSML 333

Query: 193 INGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD 252
           I+ LC+      A+++ E+M  ++G  C+PD V YN II+ L + G VD A  LL  M  
Sbjct: 334 ISSLCQNNLVDSAVEVLEQM-EKYG--CEPDTVNYNIIINSLSERGRVDDALRLLNSMV- 389

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
               P+ + +N+++ GFC  + W +A  L  +M  +      +TFN +I+  C++G ++ 
Sbjct: 390 --CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNY 447

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             ++ E M +    PD VTY+SL++GF   G +  A +LF SM    C+ D++SYN ++ 
Sbjct: 448 ATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLK 504

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             C+  + EDA  L  EM+ +   P+ +T+N L++ L Q G +  A++++++M      P
Sbjct: 505 GLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTP 564

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D FT+   I+G  + G + +A+++   +    C+    +YN  + GLC+  R + A +L 
Sbjct: 565 DIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELV 621

Query: 493 HRLQHKGPIPDVVTCSTMIHWL 514
             +      P+ VT     H L
Sbjct: 622 AEMLRNKCTPNEVTFKYANHLL 643



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 175/331 (52%), Gaps = 12/331 (3%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++   SP   +F++L++ L +N   D+ V + +++   G  PD    N++IN L + G 
Sbjct: 318 MVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGR 377

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L  ++     P+ + FN ++ G C   R  +A+ L  ++    C    +TFN 
Sbjct: 378 VDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNI 434

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           LI+ LC+      A ++FE+M       C PD+VTY+S+++G  + G V+ A +L   M 
Sbjct: 435 LIDMLCQNGLVNYATQVFEQMPRYR---CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP 491

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
                P++ +YN+++ G C    W++A  L  EM+     P+ VTFN +IN  C+ G +D
Sbjct: 492 ---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVD 548

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
           +   +LE M   G  PD  TYN+L++GF   GR+  A +L  +M    C+ D  SYN  +
Sbjct: 549 RAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTL 605

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITY 402
              C+ ++ +DA  L  EML  +  P+ +T+
Sbjct: 606 KGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 184/369 (49%), Gaps = 12/369 (3%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
            D +  M   P    +   L  L   ++++ +  L   +   G  P+    ++LI+ LC+
Sbjct: 280 LDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQ 339

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
             +   A  VL ++ +    P+TV +N +IN L   GR+ +A RL   LN   C P+ + 
Sbjct: 340 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL---LNSMVCKPDALG 396

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           FN ++ G CR      A +L  +M   F   C    +T+N +ID LC++G V+ A ++  
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQM---FRDDCPLIEMTFNILIDMLCQNGLVNYATQVFE 453

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           QM      P+++TY+SL+ GF      + A  LF  M     +PD+ ++NA++   C+  
Sbjct: 454 QMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAA 510

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           + +    L+  M+ +   P+ VT+N L++  C  G + RA E+   M + G   D+++YN
Sbjct: 511 RWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYN 570

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            LIN   +  +++DA+ L   M     +P  I+YN+ L GL +     DA +L+ +M  N
Sbjct: 571 ALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRN 627

Query: 429 DVVPDSFTF 437
              P+  TF
Sbjct: 628 KCTPNEVTF 636



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 191/415 (46%), Gaps = 15/415 (3%)

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           ++ N LI  LC TR     L   E +++   A    D V++N+++ G C+DG +  A+ +
Sbjct: 91  ISCNILIKKLCATRR----LADAERVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERV 146

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           L   +      NV+TY +LI G+C      +A  L   M    V PD  T+N ++   C 
Sbjct: 147 LGAARATGA-ANVVTYTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLCI 202

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
             K ++   L+  MI+    P+ VT+ + +  FC  G + RA +L   M   GC  DV  
Sbjct: 203 AKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVI 262

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           Y+ LIN   +   V+ A+ L   ML    +P+ + YN  L GL       D  +L+ +M 
Sbjct: 263 YSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMV 319

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
                P+  TF+  I  LC+N  V  AV+V + +    CE     YN +IN L + GR+ 
Sbjct: 320 RKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVD 379

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A +L + +  K   PD +  + ++   C+  +   A++L+  M   +C   E+TF  L+
Sbjct: 380 DALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILI 436

Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
               QN   +    +  +M   +    D+   S +++  S+       +  FR +
Sbjct: 437 DMLCQNGLVNYATQVFEQMPRYR-CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM 490


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 242/463 (52%), Gaps = 7/463 (1%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           + D   +++  + ++G   ++   NL+I  LCK      A  V+  +L+    PN V+FN
Sbjct: 194 ETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFN 253

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFA---CDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
            +I+     G +  A +L +   V +     PN+VT+N +ING C+ R    A  +  EM
Sbjct: 254 MIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEM 313

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           + + G     +  TY  +IDG  + G +D A  L  +M +  + P+ + YNSLI      
Sbjct: 314 I-KLG--IDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIE 370

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
            + +EA  L  +M++  + PD  T++ +    C  G ++K  R+   +++R +  D  T+
Sbjct: 371 GELEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTH 430

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N L++       I+ A++L  SM+ +G + D+ +Y  L+  +CK+ K+E AV +Y + + 
Sbjct: 431 NILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVK 490

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
              + +++ YN++L GL + G++  A  L+DK+Q N  + DS T+ T + G C NG V +
Sbjct: 491 ADGKSNLVVYNSILDGLCKQGSIDAARLLVDKLQQNGFL-DSVTYNTLLHGFCVNGEVEK 549

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A  +F  + N    + I +YN +IN LCKMG ++ A +L   +  +G +PD++T +T+I 
Sbjct: 550 AFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLIT 609

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
              K    D   +L   M  K  VP   T+ +L+   +Q + +
Sbjct: 610 NFVKSYGSDNVIELHDYMVLKGAVPDRQTYQSLVSPCLQEHTE 652



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 252/491 (51%), Gaps = 2/491 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F  L+    + K  +    + ++L   G +  +   N  +N L K+G T   + +   ++
Sbjct: 147 FDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFWNMYMEMV 206

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
            S ++ N  TFN +I  LC E +++EA  +   +      PNVV+FN +I+   +     
Sbjct: 207 ASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGEMD 266

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
           +ALKL        G    P++VTYN II+G CK   ++ AK +L +M    I+ N  TY 
Sbjct: 267 LALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYA 326

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            LI G+        A  L  EM++  + PD V +N++I +   +G++++ + LL  MI R
Sbjct: 327 PLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINR 386

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
            + PD  TY+ L  G CL G +++A  +   +V +    D Y++NILIN   + + +  A
Sbjct: 387 RILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGA 446

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L   M+   I+P ++TY TL++G  + G +  A+++ DK    D   +   + + +DG
Sbjct: 447 KQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDG 506

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LCK G + +A ++          L   TYN L++G C  G ++ A  LF  + + G + +
Sbjct: 507 LCKQGSI-DAARLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVN 565

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +V+ + MI++LCK G + +A +L+  M ++  VP  +T+ TL+  FV+ +  S  V+ LH
Sbjct: 566 IVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVK-SYGSDNVIELH 624

Query: 564 KMAAEKLVVSD 574
                K  V D
Sbjct: 625 DYMVLKGAVPD 635



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 201/421 (47%), Gaps = 52/421 (12%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR---LNSNGLFPDLFVLN 120
           EA+     M+K++  P + SF +++   +K  + D  + L +    ++   + P++   N
Sbjct: 232 EAISVVYLMLKIEIWPNVVSFNMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYN 291

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
            +IN  CK+     A  VL  +++     N  T+  LI+G   +G +  A RL  ++   
Sbjct: 292 CIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVET 351

Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
              P+ V +N+LI  L        A  L  +M+N       PD  TY+ +  GLC  G +
Sbjct: 352 RLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRR---ILPDEFTYSILTKGLCLSGHL 408

Query: 241 DK-----------------------------------AKELLLQMKDRNINPNVITYNSL 265
           +K                                   AK+LL  M  R I P+++TY +L
Sbjct: 409 NKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTL 468

Query: 266 ICGFCCVDDWKEAKC-LFIEMMDNGVQPD----VVTFNAMINYNCKDGKMDKVNRLLELM 320
           + G C     KE K    +++ D  V+ D    +V +N++++  CK G +D    L++ +
Sbjct: 469 VAGHC-----KEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAARLLVDKL 523

Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            Q G   D+VTYN+L+ GFC+ G + +A  LF+ M++ G   ++ SYNI+IN  CK   +
Sbjct: 524 QQNGF-LDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLI 582

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           + A+ L R M S+ I P +ITY TL++   +     + ++L D M L   VPD  T+ + 
Sbjct: 583 QQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQTYQSL 642

Query: 441 I 441
           +
Sbjct: 643 V 643



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 156/312 (50%), Gaps = 5/312 (1%)

Query: 70  DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
           D M++ +  P    +  L+  L    + +    L   + +  + PD F  ++L   LC  
Sbjct: 346 DEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILTKGLCLS 405

Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
           G  + A  V   I+      +  T N LIN +     I  A +L   + V    P++VT+
Sbjct: 406 GHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTY 465

Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
            TL+ G C+      A++++++ V   G   K ++V YNSI+DGLCK G +D A+ LL+ 
Sbjct: 466 GTLVAGHCKEGKIEAAVQIYDKTVKADG---KSNLVVYNSILDGLCKQGSIDAAR-LLVD 521

Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
              +N   + +TYN+L+ GFC   + ++A  LF+EM++ G   ++V++N MIN+ CK G 
Sbjct: 522 KLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGL 581

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + +   L+  M  +G+ PD +TY +L+  F          EL   MV KG   D  +Y  
Sbjct: 582 IQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQTYQS 641

Query: 370 LINANCKDQKVE 381
           L++  C  +  E
Sbjct: 642 LVSP-CLQEHTE 652


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 203/363 (55%), Gaps = 18/363 (4%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-----CDPNVVTFNTLINGLCRTRNTL 203
           P+  ++N L+NGLC E R  EA  L   L++ A     C P+VV+++T+ING  +  +  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALEL---LHIMADDGGDCPPDVVSYSTVINGFFKEGD-- 103

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
                 ++M+++      P+VVTYNSII  LCK   VDKA E+L  M    + P+ +TYN
Sbjct: 104 -----LDKMLDQR---ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYN 155

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S++ GFC     KEA     +M  +GV+PDVVT+N++++Y CK+G+  +  ++ + M +R
Sbjct: 156 SIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR 215

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD  TY +L+ G+   G +     L   MV  G   + Y ++IL+ A  K +KVE+A
Sbjct: 216 GLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEA 275

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + ++ +M  + + P+ +TY T++  L + G + DA+   ++M    + PDS  + + I  
Sbjct: 276 MLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHS 335

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC      +A ++F  + +    L    +N +I+  CK GR+  + KLF  +   G  PD
Sbjct: 336 LCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395

Query: 504 VVT 506
           ++T
Sbjct: 396 IIT 398



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 247/528 (46%), Gaps = 25/528 (4%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
            D M+  + SP + ++  ++  L K +  D  + +   +  +G+ PD    N +++  C 
Sbjct: 104 LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A V L ++      P+ VT+N L++ LC  GR  EA ++F  +      P++ T
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223

Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
           + TL+ G   T+  LV +    +++   G    P+   ++ ++    K   V++A  +  
Sbjct: 224 YGTLLQGYA-TKGALVEMHGLLDLMVRNG--IHPNHYVFSILVCAYAKQEKVEEAMLVFS 280

Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
           +M+ + +NPN +TY ++I   C     ++A   F +M+D G++PD + +N++I+  C   
Sbjct: 281 KMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFD 340

Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
           K +K   L   M+ RG+   T+ +NS++D  C  GR+  + +LF  MV  G + D+ +  
Sbjct: 341 KWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG 400

Query: 369 ILINANCKDQKV-EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
             + +  +D  +  +   ++  M +   +      NT  +G     N             
Sbjct: 401 RFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNT--NGGNTASNSSGG--------- 449

Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE--TYNCLINGLCKMGRL 485
               P   T+   + GLCKN    +A+++FQ +  C  +L++E  T+N +I+ L K+GR 
Sbjct: 450 ----PFLGTYNIILHGLCKNKLTDDALRMFQNL--CLMDLKLEARTFNIMIDALLKVGRN 503

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
             A  LF      G +P+  T   M   +  +G +++ + L L ME   C         +
Sbjct: 504 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 563

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
           +R  +Q  + ++    L  M  EK    + S +S  +DLLS   KY+E
Sbjct: 564 VRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSG-GKYQE 609



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 237/502 (47%), Gaps = 34/502 (6%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG--LFPDLFVLNL 121
           +A + FD +++ +  P + S+ ILL  L    +    + L   +  +G    PD+   + 
Sbjct: 35  DARHVFDELLR-RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +IN   K G        L ++L    +PN VT+N +I  LC    + +A  +   +    
Sbjct: 94  VINGFFKEG-------DLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146

Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
             P+ +T+N++++G C +     A+   ++M ++     +PDVVTYNS++D LCK+G   
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG---VEPDVVTYNSLMDYLCKNGRCT 203

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
           +A+++   M  R + P++ TY +L+ G+       E   L   M+ NG+ P+   F+ ++
Sbjct: 204 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263

Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
               K  K+++   +   M Q+G+NP+ VTY +++D  C  GR+  A   F  M+ +G R
Sbjct: 264 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR 323

Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
            D   YN LI++ C   K E A  L+ EML   I  S I +N+++    + G + ++ KL
Sbjct: 324 PDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKL 383

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKN-GFVLEAVQVFQAIRNCKCELR------------ 468
            D M    V PD  T   ++    ++    +    +F  + N   + +            
Sbjct: 384 FDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTA 443

Query: 469 --------IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
                   + TYN +++GLCK      A ++F  L       +  T + MI  L K G+ 
Sbjct: 444 SNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 503

Query: 521 DKANDLLLDMEAKNCVPSEVTF 542
           D+A DL +   +   VP+  T+
Sbjct: 504 DEAKDLFVAFSSNGLVPNYWTY 525



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 176/327 (53%), Gaps = 9/327 (2%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN--PNVITYNSLICGFCCVDDWKEAK 279
           PDV +YN +++GLC +    +A ELL  M D   +  P+V++Y+++I GF     +KE  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF-----FKEGD 103

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
               +M+D  + P+VVT+N++I   CK   +DK   +L  M++ GV PD +TYNS++ GF
Sbjct: 104 --LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  G+   A      M S G   DV +YN L++  CK+ +  +A  ++  M    ++P +
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            TY TLL G    G L +   L+D M  N + P+ + F+  +    K   V EA+ VF  
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +R         TY  +I+ LCK GR++ A   F ++  +G  PD +  +++IH LC   +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLL 546
            +KA +L L+M  +    S + F +++
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSII 368



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 155/295 (52%), Gaps = 13/295 (4%)

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG--CRHDVYSYN 368
           +    + + +++RG+ PD  +YN L++G C   R   A EL   M   G  C  DV SY+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            +IN   K+  ++       +ML +RI P+V+TYN++++ L +   +  A++++  M  +
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V+PD  T+ + + G C +G   EA+   + +R+   E  + TYN L++ LCK GR   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLR 547
            K+F  +  +G  PD+ T  T++     +G + + +  LLD+  +N + P+   F  L+ 
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHG-LLDLMVRNGIHPNHYVFSILVC 264

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            + +  K  + +++  KM  + L  + ++  + V+D+L K  +  + +  F  ++
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT-VIDVLCKSGRVEDAMLYFEQMI 318



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 149/297 (50%), Gaps = 10/297 (3%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN--PDTVTYN 333
           ++A+ +F E++  G+ PDV ++N ++N  C + +  +   LL +M   G +  PD V+Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           ++++GF   G + +       M+ +    +V +YN +I A CK Q V+ A+ +   M+  
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            + P  +TYN+++ G    G   +A+  + KM+ + V PD  T+ + +D LCKNG   EA
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
            ++F ++     +  I TY  L+ G    G L     L   +   G  P+    S ++  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             K+ ++++A  +   M  +   P+ VT+ T++    ++ +    ++   +M  E L
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 142/356 (39%), Gaps = 84/356 (23%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  F  M +   +P   ++  ++ +L K+ + +  +  F+++   GL PD  V N LI
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG------------------ 165
           + LC       A  +   +L      +T+ FN +I+  C EG                  
Sbjct: 334 HSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVK 393

Query: 166 -------RIMEAARLFKKL--NVF-----------------------------ACDPNVV 187
                  R + +AR    L  N++                             +  P + 
Sbjct: 394 PDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLG 453

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC----KPDVVTYNSIIDGLCKDGFVDKA 243
           T+N +++GLC+ + T  AL++F+ +       C    K +  T+N +ID L K G  D+A
Sbjct: 454 TYNIILHGLCKNKLTDDALRMFQNL-------CLMDLKLEARTFNIMIDALLKVGRNDEA 506

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
           K+L +      + PN  TY  +          +E   LF+ M DNG   D    + M+N+
Sbjct: 507 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD----SGMLNF 562

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             ++            ++QRG      TY S++D        S A  LF+ ++S G
Sbjct: 563 IVRE------------LLQRGEITRAGTYLSMIDEKHFSLEASTA-SLFIDLLSGG 605


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/374 (33%), Positives = 194/374 (51%), Gaps = 17/374 (4%)

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
           +  N  ++ L R        +  E MV   G I  PD++   S+I G CK G   KA  +
Sbjct: 85  IESNNNLSKLVRNGELEEGFRFLESMVYR-GDI--PDIIPCTSLIRGFCKIGKTRKATRI 141

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
           +  ++D    P+VITYN LI G C    W +A+ L  +M+  G  P VVTFN +IN+ C+
Sbjct: 142 MEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCR 201

Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
            G + +   +LE M + G  P++++YN L+ GFC   ++ RA E    M S+GC  D+ +
Sbjct: 202 KGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVT 261

Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
           YN L+ A CKD KV+ AV L  ++ S+   P +ITYNT++ GL +VG    A KL+D+M+
Sbjct: 262 YNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMR 321

Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
              + PD  T+++ + GL + G V EA++ F  +     +    TYN ++ GLCK  +  
Sbjct: 322 AKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTD 381

Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
            A      +  +G  P   + + +I  L  EG   +A +LL ++               L
Sbjct: 382 RAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL--------------CL 427

Query: 547 RGFVQNNKKSKVVV 560
           RG V+ +   KV V
Sbjct: 428 RGVVKKSSAEKVAV 441



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 191/367 (52%), Gaps = 8/367 (2%)

Query: 73  IKMKPSPGMTSFTIL-----LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
           + + P   +T+F  +     L+ L +N + +      + +   G  PD+     LI   C
Sbjct: 71  VSLSPIHSLTNFEEIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFC 130

Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
           K+G T  A  ++  I  S   P+ +T+N LI+G+C+ GR M+A +L   +    C P+VV
Sbjct: 131 KIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVV 190

Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
           TFN LIN LCR      A+ + E+M       C P+ ++YN ++ G CK+  +++A E L
Sbjct: 191 TFNILINFLCRKGLLGRAIDVLEKMPKHG---CTPNSLSYNPLLHGFCKEKKMERAIEYL 247

Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
            +M  R   P+++TYN+L+   C       A  L  ++   G  P ++T+N +I+   K 
Sbjct: 248 GKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 307

Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
           GK D+  +LL+ M  +G+ PD +TY+SL+ G    G++  A + F  +   G + +  +Y
Sbjct: 308 GKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITY 367

Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
           N ++   CK +K + A+     M+    +P+  +Y  L+ GL   G   +AL+L++++ L
Sbjct: 368 NAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCL 427

Query: 428 NDVVPDS 434
             VV  S
Sbjct: 428 RGVVKKS 434



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 174/328 (53%), Gaps = 3/328 (0%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
            E   F + M+     P +   T L+    K  +      + + +  +G  PD+   N+L
Sbjct: 101 EEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVL 160

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ +C  G    A  +L  ++R   +P+ VTFN LIN LC +G +  A  + +K+    C
Sbjct: 161 ISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGC 220

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN +++N L++G C+ +    A++   +M +     C PD+VTYN+++  LCKDG VD 
Sbjct: 221 TPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRG---CYPDIVTYNTLLTALCKDGKVDA 277

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ELL Q+  +  +P +ITYN++I G   V    +A  L  EM   G++PD++T+++++ 
Sbjct: 278 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVG 337

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              ++GK+D+  +    +   GV P+ +TYN++M G C   +  RA +    MV +GC+ 
Sbjct: 338 GLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKP 397

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREM 390
              SY ILI     +   ++A+ L  E+
Sbjct: 398 TEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 209/412 (50%), Gaps = 20/412 (4%)

Query: 172 RLFKKLNVFACDPN--VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
           R  K+  +FA   N  + + + L NG     N  V+L     + N        + +  N+
Sbjct: 39  RKLKRSRIFAVSFNGKLQSLDKLPNG--HLGNGHVSLSPIHSLTNF-------EEIESNN 89

Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
            +  L ++G +++    L  M  R   P++I   SLI GFC +   ++A  +   + D+G
Sbjct: 90  NLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSG 149

Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
             PDV+T+N +I+  C  G+     +LL  M++RG +P  VT+N L++  C  G + RA 
Sbjct: 150 AVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAI 209

Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
           ++   M   GC  +  SYN L++  CK++K+E A+    +M S    P ++TYNTLL+ L
Sbjct: 210 DVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTAL 269

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
            + G +  A++L++++      P   T+ T IDGL K G   +A ++   +R    +  I
Sbjct: 270 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDI 329

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY+ L+ GL + G++  A K FH L+  G  P+ +T + ++  LCK  + D+A D L  
Sbjct: 330 ITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAY 389

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH---------KMAAEKLVV 572
           M  + C P+E ++  L+ G        + + LL+         K +AEK+ V
Sbjct: 390 MVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAEKVAV 441



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 36/296 (12%)

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           ++G++++  R LE M+ RG  PD +   SL+ GFC +G+  +A  +              
Sbjct: 96  RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIM------------- 142

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
                       + +ED+  +          P VITYN L+SG+   G   DA KL+  M
Sbjct: 143 ------------EIIEDSGAV----------PDVITYNVLISGMCSTGRWMDAEKLLADM 180

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
                 P   TF   I+ LC+ G +  A+ V + +    C     +YN L++G CK  ++
Sbjct: 181 VRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKM 240

Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
           + A +   ++  +G  PD+VT +T++  LCK+G++D A +LL  + +K C P  +T+ T+
Sbjct: 241 ERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTV 300

Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           + G  +  K  +   LL +M A+ L   D+   S +V  LS++ K  E +  F  L
Sbjct: 301 IDGLSKVGKTDQAAKLLDEMRAKGL-KPDIITYSSLVGGLSREGKVDEAIKFFHDL 355



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 40/289 (13%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++   SP + +F IL+  L +       + + +++  +G  P+    N L++  CK   
Sbjct: 180 MVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKK 239

Query: 132 TSGAFVVLGRIL-RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFN 190
              A   LG++  R C+ P+ VT+N L+  LC +G++  A  L  +L+   C P ++T+N
Sbjct: 240 MERAIEYLGKMTSRGCY-PDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYN 298

Query: 191 TLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM 250
           T+I+GL +   T  A KL +EM  +     KPD++TY+S++ GL ++G VD+A +    +
Sbjct: 299 TVIDGLSKVGKTDQAAKLLDEMRAKG---LKPDIITYSSLVGGLSREGKVDEAIKFFHDL 355

Query: 251 KDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKM 310
           +   + PN ITYN+++ G C                                   K  K 
Sbjct: 356 EVLGVKPNAITYNAIMLGLC-----------------------------------KARKT 380

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
           D+    L  M+QRG  P   +Y  L++G    G    A EL   +  +G
Sbjct: 381 DRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRG 429



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 3/228 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
             A+   + M K   +P   S+  LL    K K+ +  +    ++ S G +PD+   N L
Sbjct: 206 GRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTL 265

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           +  LCK G    A  +L ++     +P  +T+N +I+GL   G+  +AA+L  ++     
Sbjct: 266 LTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGL 325

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P+++T+++L+ GL R      A+K F ++  E   + KP+ +TYN+I+ GLCK    D+
Sbjct: 326 KPDIITYSSLVGGLSREGKVDEAIKFFHDL--EVLGV-KPNAITYNAIMLGLCKARKTDR 382

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           A + L  M  R   P   +Y  LI G       KEA  L  E+   GV
Sbjct: 383 AIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 193/340 (56%), Gaps = 3/340 (0%)

Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
           C+      A+KL +EM ++    C PD+VTYN +++G+C++G VD A E L  +      
Sbjct: 3   CKRSGYKQAMKLLDEMRDKG---CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCE 59

Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
           PN ++YN ++ G C  + W++A+ L  EM   G  P+VVTFN +I++ C+ G ++    +
Sbjct: 60  PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 119

Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
           LE + + G  P++++YN L+  FC   ++ +A      MVS+GC  D+ SYN L+ A C+
Sbjct: 120 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 179

Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
             +V+ AV L  ++  +   P +I+YNT++ GL + G   +AL+L+++M    + PD  T
Sbjct: 180 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 239

Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
           ++T   GLC+   + +A++ F  +++         YN +I GLCK     +A  LF  + 
Sbjct: 240 YSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMI 299

Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
             G +P+  T + +I  L  EG + +A DLL ++ ++  V
Sbjct: 300 GNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 174/328 (53%), Gaps = 5/328 (1%)

Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
           CK      A  +L  +     TP+ VT+N ++NG+C EGR+ +A    K L  + C+PN 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGLCKDGFVDKAKE 245
           V++N ++ GLC       A    EE++ E G   C P+VVT+N +I  LC+ G V+ A E
Sbjct: 63  VSYNIVLKGLCTAERWEDA----EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALE 118

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           +L Q+      PN ++YN L+  FC      +A      M+  G  PD+V++N ++   C
Sbjct: 119 VLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALC 178

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           + G++D    LL  +  +G  P  ++YN+++DG    G+   A EL   MVSKG + D+ 
Sbjct: 179 RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDII 238

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y+ +    C++ ++EDA+  + ++    IRP+ + YN ++ GL +      A+ L   M
Sbjct: 239 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 298

Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEA 453
             N  +P+  T+   I+GL   G + EA
Sbjct: 299 IGNGCMPNESTYTILIEGLAYEGLIKEA 326



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 171/343 (49%), Gaps = 3/343 (0%)

Query: 93  KNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTV 152
           K   Y   + L   +   G  PD+   N+++N +C+ G    A   L  +      PNTV
Sbjct: 4   KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           ++N ++ GLC   R  +A  L  ++    C PNVVTFN LI+ LCR      AL++ E+ 
Sbjct: 64  SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ- 122

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           + ++G  C P+ ++YN ++   CK   +DKA   L  M  R   P++++YN+L+   C  
Sbjct: 123 IPKYG--CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
            +   A  L  ++ D G  P ++++N +I+   K GK  +   LL  M+ +G+ PD +TY
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITY 240

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           +++  G C   RI  A   F  +   G R +   YN +I   CK ++   A+ L+  M+ 
Sbjct: 241 STIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIG 300

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
               P+  TY  L+ GL   G + +A  L+D++    VV  S 
Sbjct: 301 NGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSL 343



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 178/338 (52%), Gaps = 4/338 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A+   D M     +P + ++ +++  + +  + D  +   K L S G  P+    N+++
Sbjct: 10  QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 69

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
             LC       A  ++G + +    PN VTFN LI+ LC +G +  A  + +++  + C 
Sbjct: 70  KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 129

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PN +++N L++  C+ +    A+   + MV+     C PD+V+YN+++  LC+ G VD A
Sbjct: 130 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG---CYPDIVSYNTLLTALCRSGEVDVA 186

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
            ELL Q+KD+   P +I+YN++I G       KEA  L  EM+  G+QPD++T++ +   
Sbjct: 187 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 246

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C++ +++   R    +   G+ P+TV YN+++ G C       A +LF  M+  GC  +
Sbjct: 247 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 306

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSER-IRPSVI 400
             +Y ILI     +  +++A  L  E+ S   +R S+I
Sbjct: 307 ESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLI 344



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 160/297 (53%), Gaps = 3/297 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ F   +      P   S+ I+L  L   ++++    L   +   G  P++   N+L
Sbjct: 44  DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 103

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ LC+ G+   A  VL +I +   TPN++++N L++  C + ++ +A      +    C
Sbjct: 104 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 163

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            P++V++NTL+  LCR+    VA++L  ++ ++    C P +++YN++IDGL K G   +
Sbjct: 164 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG---CAPVLISYNTVIDGLTKAGKTKE 220

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A ELL +M  + + P++ITY+++  G C  D  ++A   F ++ D G++P+ V +NA+I 
Sbjct: 221 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 280

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
             CK  +      L   MI  G  P+  TY  L++G    G I  AR+L   + S+G
Sbjct: 281 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 173/341 (50%)

Query: 235 CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
           CK     +A +LL +M+D+   P+++TYN ++ G C      +A      +   G +P+ 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
           V++N ++   C   + +    L+  M Q+G  P+ VT+N L+   C  G +  A E+   
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 355 MVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
           +   GC  +  SYN L++A CK +K++ A+     M+S    P +++YNTLL+ L + G 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 415 LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC 474
           +  A++L+ +++     P   ++ T IDGL K G   EA+++   + +   +  I TY+ 
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 475 LINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKN 534
           +  GLC+  R++ A + F ++Q  G  P+ V  + +I  LCK  +   A DL   M    
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 535 CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           C+P+E T+  L+ G        +   LL ++ +  +V   L
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSL 343



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 129/243 (53%)

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
           +A +L   M  KGC  D+ +YN+++N  C++ +V+DA+   + + S    P+ ++YN +L
Sbjct: 10  QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 69

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            GL       DA +L+ +M      P+  TF   I  LC+ G V  A++V + I    C 
Sbjct: 70  KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 129

Query: 467 LRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
               +YN L++  CK  ++  A      +  +G  PD+V+ +T++  LC+ G++D A +L
Sbjct: 130 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 189

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           L  ++ K C P  +++ T++ G  +  K  + + LL++M ++ L    ++ S+    L  
Sbjct: 190 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 249

Query: 587 KDK 589
           +D+
Sbjct: 250 EDR 252



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 3/193 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+ F D M+     P + S+  LLT L ++ + D  V L  +L   G  P L   N +
Sbjct: 149 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 208

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+ L K G T  A  +L  ++     P+ +T++ +  GLC E RI +A R F K+     
Sbjct: 209 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 268

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN V +N +I GLC+ R T  A+ LF  M+   G  C P+  TY  +I+GL  +G + +
Sbjct: 269 RPNTVLYNAIILGLCKRRETHSAIDLFAYMI---GNGCMPNESTYTILIEGLAYEGLIKE 325

Query: 243 AKELLLQMKDRNI 255
           A++LL ++  R +
Sbjct: 326 ARDLLDELCSRGV 338



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 118/230 (51%), Gaps = 1/230 (0%)

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
           A CK    + A+ L  EM  +   P ++TYN +++G+ Q G + DA++ +  +      P
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           ++ ++   + GLC      +A ++   +    C   + T+N LI+ LC+ G ++ A ++ 
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
            ++   G  P+ ++ + ++H  CK+ +MDKA   L  M ++ C P  V++ TLL    ++
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180

Query: 553 NKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +    V LLH++  +      +S ++ V+D L+K  K +E L     ++
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNT-VIDGLTKAGKTKEALELLNEMV 229



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 4/137 (2%)

Query: 62  SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
           + EA+   + M+     P + +++ +   L +  + +  +  F ++   G+ P+  + N 
Sbjct: 218 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 277

Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
           +I  LCK   T  A  +   ++ +   PN  T+  LI GL  EG I EA  L  +L    
Sbjct: 278 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL---- 333

Query: 182 CDPNVVTFNTLINGLCR 198
           C   VV  + +  G  R
Sbjct: 334 CSRGVVRKSLINKGAIR 350


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 254/508 (50%), Gaps = 41/508 (8%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
           SP   ++  L+  +AK+      + +F  +   G+ PD+   N++I+   K G    A  
Sbjct: 180 SPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGE 239

Query: 138 VLGRILRSCFT-PNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFACDPNVVTFNTLIN 194
           +  R+LR     P+ V++N +I+GLC  GR  E   +++++  N   CD  + T++ LI+
Sbjct: 240 MWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCD--LFTYSALIH 297

Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKD-- 252
           GL    +   A K++EEMV   G   +PDVVT N++++GLCK G V++  EL  +M    
Sbjct: 298 GLSEAGDLGGARKVYEEMV---GRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCS 354

Query: 253 -RNI---------------------------NPNVITYNSLICGFCCVDDWKEAKCLF-- 282
            RN+                             +  TY  ++ G C       A  +   
Sbjct: 355 LRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEE 414

Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
            E  + G+  D   ++++IN  CK+G++D+ + ++ELM +RG   ++   N L+DGF   
Sbjct: 415 AEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKH 474

Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
            ++  A ++F  M  KGC   V SYNILIN   + ++  +A     EML +  +P +ITY
Sbjct: 475 SKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITY 534

Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
           +TL+ GL++   +  AL+L  +       PD   +   I  LC +G V +A+Q++  +R 
Sbjct: 535 STLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQ 594

Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
            KC + + T+N ++ G  K+G  + A K++  +      PD+++ +  +  LC  G++  
Sbjct: 595 KKC-VNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTD 653

Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
           A   L D   +  +P+ +T+  L+R  +
Sbjct: 654 AVGFLDDALVRGFLPTAITWNILVRAVI 681



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 262/539 (48%), Gaps = 24/539 (4%)

Query: 77  PSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGA 135
           P P     T LL   AK +  +  + +F+ + +  G  P +   N L+N   +    + A
Sbjct: 74  PCPEDVPLT-LLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARA 132

Query: 136 FVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
                    +  +PN  T+N L+  +C +G   +   L   +      P+ +T+ TLI G
Sbjct: 133 ENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGG 192

Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRN 254
           + ++ +   AL++F+EM  E G   +PDVV YN IIDG  K G   KA E+  ++ ++  
Sbjct: 193 VAKSGDLGFALEVFDEM-RERGV--EPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREEL 249

Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
           + P+V++YN +I G C    + E   ++  M  N  + D+ T++A+I+   + G +    
Sbjct: 250 VFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGAR 309

Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
           ++ E M+ RGV PD VT N++++G C  G +    EL+  M  K    +V SYNI +   
Sbjct: 310 KVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEM-GKCSLRNVRSYNIFLKGL 368

Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND--VVP 432
            ++ KV+DA+ L+  +L         TY  ++ GL   G +  AL+++++ +  +  +  
Sbjct: 369 FENGKVDDAMMLWDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDV 424

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D F +++ I+ LCK G + EA  V + +    C+      N LI+G  K  +L +A K+F
Sbjct: 425 DEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVF 484

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             +  KG    VV+ + +I+ L +  +  +A D + +M  K   P  +T+ TL+ G  ++
Sbjct: 485 REMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYES 544

Query: 553 NKKSKVVVLLHK---------MAAEKLVVSDLSLSSKVVDLLSKDKKYRE--CLNQFRH 600
           N     + L H+         +    +V+  L  S KV D L      R+  C+N   H
Sbjct: 545 NMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTH 603



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/494 (24%), Positives = 239/494 (48%), Gaps = 44/494 (8%)

Query: 142 ILRSCFTPNTVTFNFLINGLCAEGRIM--EAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
           + R  F+P++  F+ ++  + A+  ++   A R+   ++   C  +V    TL+    +T
Sbjct: 34  VRRPGFSPSSAVFHHILRRVAADPGLLLAHAPRIIAAIHC-PCPEDVPL--TLLKAYAKT 90

Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
           R    AL +F+ M + FG  C P + ++N++++   +     +A+      +   ++PNV
Sbjct: 91  RMPNEALHVFQTMPHVFG--CSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNV 148

Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
            TYN L+   C   ++++ + L   M   G+ PD +T+  +I    K G +     + + 
Sbjct: 149 ETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDE 208

Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH-DVYSYNILINANCKDQ 378
           M +RGV PD V YN ++DGF   G   +A E++  ++ +      V SYN++I+  CK  
Sbjct: 209 MRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCG 268

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
           +  + + ++  M     +  + TY+ L+ GL + G+LG A K+ ++M    V PD  T  
Sbjct: 269 RFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCN 328

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCK------------------------------CELR 468
             ++GLCK G V E  ++++ +  C                                E  
Sbjct: 329 AMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEAD 388

Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHK--GPIPDVVTCSTMIHWLCKEGQMDKANDL 526
             TY  +++GLC  G +  A ++    +H+  G   D    S++I+ LCKEG++D+A+ +
Sbjct: 389 SATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGV 448

Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
           +  M  + C  +      L+ GFV+++K    V +  +M+ +   ++ +S +  +  LL 
Sbjct: 449 VELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLL- 507

Query: 587 KDKKYRE---CLNQ 597
           + +++RE   C+N+
Sbjct: 508 RAERFREAYDCVNE 521


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 226/473 (47%), Gaps = 21/473 (4%)

Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLN-VFACDPNVVTFNTLINGLCRTRNTL-V 204
             P    F  LI    + GR  EA   F ++   F C P    +N ++  L  +   + +
Sbjct: 133 LQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPL 192

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL L+  MV    A C P+  TYN ++DGLCK G    A +L  +M  R I PNV T+  
Sbjct: 193 ALALYNRMV---AAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTI 249

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+   C     KEA+ L   M D G  PD VT+NA ++  CK G++D+    LE + + G
Sbjct: 250 LLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTG 309

Query: 325 VNPDTVT-YNSLMDGFCLVGRISRARELFVSMVSKG-CRHDVYSYNILINANCKDQKVED 382
                +  Y+ L+DG  L GR     + ++ ++ +     D+  Y I+I    +  +++D
Sbjct: 310 TFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDD 369

Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
           A   + EM  +R  P    YNTLL  L   G+L  A  L+ +M  N+VV D+ T    I 
Sbjct: 370 AFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIH 429

Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ------ 496
           GLCK   V EA+QVF  +    C   + TYN LI+GL +  RL+ A  LF++++      
Sbjct: 430 GLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPS 489

Query: 497 -------HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
                      + D  +   ++  +C+ GQ+ KA  LL  +     VP  VT+ TLL G 
Sbjct: 490 LFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGL 549

Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            +       + L  ++  +   + +++  + ++D L +  +Y + +  F+ +L
Sbjct: 550 CKVRNLDGALRLFRELQVKGFSLDEITYGT-LIDSLLRAHRYNDAMTLFQDIL 601



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 240/529 (45%), Gaps = 52/529 (9%)

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
            +L  ++A        ++L+ R+ + G  P+    N+L++ LCK G    A  +   +L+
Sbjct: 178 AVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQ 237

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC------- 197
              TPN  T   L++ +C  G++ EA  L   +    C P+ VT+N  ++GLC       
Sbjct: 238 RGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDE 297

Query: 198 ---------RTRNTLVALKLFEEMVN--------EFGAIC----------KPDVVTYNSI 230
                    RT   ++ LK +  +++        E G  C           PD+V Y  +
Sbjct: 298 AIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIM 357

Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
           I G  + G +D A     +MK++   P+   YN+L+   C   D   A+ L  EM  N V
Sbjct: 358 IRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNV 417

Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
             D  T   MI+  CK   +D+  ++ + M++ G +P  +TYN L+DG     R+  AR 
Sbjct: 418 VLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARM 477

Query: 351 LFVSM-----------VSKGCRH--DVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           LF  M           ++ G     D  S   L+++ C+  +V  A  L R ++   + P
Sbjct: 478 LFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVP 537

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            V+TYNTLL+GL +V NL  AL+L  ++Q+     D  T+ T ID L +     +A+ +F
Sbjct: 538 DVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLF 597

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF--HRL-QHKGPIPDVVTCSTMIHWL 514
           Q I +      +  YN ++  LC+M +L  A   +  H L ++     D V  S    + 
Sbjct: 598 QDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKKYNLSAQDEVIASARKKF- 656

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
            +EG +D+A   L+ ++ +    +   +   L G +Q  +    + + H
Sbjct: 657 -EEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDALKIFH 704



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 143/561 (25%), Positives = 237/561 (42%), Gaps = 64/561 (11%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           T+ +A+  FD M++   +P + + TILL+ +    Q     +L   +   G  PD    N
Sbjct: 224 TAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYN 283

Query: 121 LLINCLCKMGITSGAF-----------VVLGRILRSC----------------------- 146
             ++ LCK G    A             VLG    SC                       
Sbjct: 284 AFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLE 343

Query: 147 ---FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
              F+P+ V +  +I G    GRI +A   F ++      P+   +NTL+  LC + +  
Sbjct: 344 QADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLD 403

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A  L  EM      +   D  T+  +I GLCK   VD+A ++   M +   +P V+TYN
Sbjct: 404 GARSLMSEMAQNNVVL---DTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYN 460

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQP--------------DVVTFNAMINYNCKDGK 309
            LI G       +EA+ LF +M + G  P              D  +   +++  C+ G+
Sbjct: 461 VLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQ 519

Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
           + K  +LL  ++  GV PD VTYN+L++G C V  +  A  LF  +  KG   D  +Y  
Sbjct: 520 VLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGT 579

Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL-----KLIDK 424
           LI++  +  +  DA+ L++++L     PS+  YN+++  L ++  L  A+      L+ K
Sbjct: 580 LIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKK 639

Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
             L+    D    +       + G + EAV+    I      +    Y   + GL +  R
Sbjct: 640 YNLS--AQDEVIASARKK--FEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARR 695

Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
           +  A K+FH L+  G       C+ +  +LC E  +D A D++L    K  + S      
Sbjct: 696 IDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFIMSRHVGNR 755

Query: 545 LLRGFVQNNKKSKVVVLLHKM 565
           LL      +++     L  +M
Sbjct: 756 LLSSLCIRHRRKDAQALAWRM 776



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 206/471 (43%), Gaps = 37/471 (7%)

Query: 50  FLNDRHKSGNITSNEAVYFFDCMIKMKP----SPGMTSFTILLTMLAKNKQYDTVVSLFK 105
           FL  R++ G          F C +++      SP +  +TI++   A+  + D   + F 
Sbjct: 326 FLAGRYEEG----------FQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFD 375

Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
            +      PD F  N L+  LC  G   GA  ++  + ++    +T T   +I+GLC + 
Sbjct: 376 EMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQ 435

Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN----------E 215
            + EA ++F  +    C P V+T+N LI+GL R      A  LF +M             
Sbjct: 436 LVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLT 495

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
            GA    D  +   ++D +C+ G V KA +LL  + D  + P+V+TYN+L+ G C V + 
Sbjct: 496 LGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNL 555

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
             A  LF E+   G   D +T+  +I+   +  + +    L + ++  G  P    YNS+
Sbjct: 556 DGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSI 615

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK-------DQKVEDAVCLYR 388
           M   C + ++S+A   +   + K  ++++ + + +I +  K       D+ V + + + +
Sbjct: 616 MRSLCRMNKLSQAINFWFDHLLK--KYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQ 673

Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
           E  S    P    Y   L GL Q   + DALK+   ++ + +       A     LC   
Sbjct: 674 EYGSVNSCP----YTIWLIGLIQARRIDDALKIFHILEESGIDITPACCAHLSKYLCWEK 729

Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
            +  AV V     N +  +     N L++ LC   R K A  L  R+   G
Sbjct: 730 NLDSAVDVMLYTLNKRFIMSRHVGNRLLSSLCIRHRRKDAQALAWRMHLVG 780


>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
 gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
          Length = 440

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 194/360 (53%), Gaps = 5/360 (1%)

Query: 99  TVVSLFKRL--NSNG-LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
             VS F R+  +S+G + P L    +LI C C+ G     F  LG +++  +    + F 
Sbjct: 78  AAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFT 137

Query: 156 FLINGLCAEGRIMEAARL-FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
            L+  LCAE R   A  +  +++    C P+V ++N L+ GLC    +  AL+L   M +
Sbjct: 138 PLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMAD 197

Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
           + G  C PDVV+Y++IIDGL K+G  DKA     +M +R I P+V+TYN+++   C    
Sbjct: 198 D-GGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQA 256

Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
             +A  +   M+ NGV PD +T+N++++  C  G+  +   +LE M   GV PD VTY S
Sbjct: 257 MDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTS 316

Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
           LMD  C  GR   AR++  SM+ +G + +V +Y+ L++       + +   L   M+   
Sbjct: 317 LMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNG 376

Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
           I+P    ++ L+    +  N+  A+ +  KM+   + PD  T+ T IDGLCK+G V +A+
Sbjct: 377 IQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 190/382 (49%), Gaps = 17/382 (4%)

Query: 118 VLNLLINCLCKMGITSGAFVVLG--RILRS---CFTPNTVTFNFLINGLCAEGRI----M 168
           ++  L   L  +   S A  V G  R+ RS     TP   T+  LI   C  GR+     
Sbjct: 60  IIRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFA 119

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
               + KK   +  +P  + F  L+  LC  + T  A+ +    + E G  C P V +YN
Sbjct: 120 GLGNVIKK--GYRVEP--IIFTPLLKSLCAEKRTSNAMNIVLRRMTELG--CAPHVFSYN 173

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNIN--PNVITYNSLICGFCCVDDWKEAKCLFIEMM 286
            ++ GLC +    +A ELL  M D   +  P+V++Y+++I G     D  +A   + EM+
Sbjct: 174 ILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEML 233

Query: 287 DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRIS 346
           + G+ PDVVT+N ++   CK   MDK   +L  M++ GV PD +TYNS++ G+C  G+  
Sbjct: 234 ERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSK 293

Query: 347 RARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLL 406
            A  +   M S G   D  +Y  L++  CK+ +  +A  +   M+   ++P+VITY+TLL
Sbjct: 294 EAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLL 353

Query: 407 SGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCE 466
            G    G L +   L+D M  N + PD   F+  I    K+  V  A+ VF  +R  +  
Sbjct: 354 HGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLT 413

Query: 467 LRIETYNCLINGLCKMGRLKTA 488
             + TY  LI+GLCK GR+  A
Sbjct: 414 PDVVTYGTLIDGLCKSGRVDDA 435



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 160/354 (45%), Gaps = 3/354 (0%)

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            A+  F  M         P + TY  +I   C+ G +D     L  +  +      I + 
Sbjct: 78  AAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFT 137

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
            L+   C       A  + +  M   G  P V ++N ++   C + +  +   LL +M  
Sbjct: 138 PLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMAD 197

Query: 323 RGVN--PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
            G +  PD V+Y++++DG    G   +A   +  M+ +G   DV +YN ++ A CK Q +
Sbjct: 198 DGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAM 257

Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
           + A+ +   M+   + P  ITYN+++ G    G   +A+ +++KM  + V PD+ T+ + 
Sbjct: 258 DKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSL 317

Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
           +D LCKNG  +EA ++  ++     +  + TY+ L++G    G L     L   +   G 
Sbjct: 318 MDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGI 377

Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
            PD    S +I    K   +D A  +   M  +   P  VT+ TL+ G  ++ +
Sbjct: 378 QPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGR 431



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 169/354 (47%), Gaps = 8/354 (2%)

Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI-EMMDNGVQPDVVTFNAMINYNC 305
           + +  D  + P + TY  LI G CC     +     +  ++  G + + + F  ++   C
Sbjct: 86  MARSSDGAVTPTLHTYGILI-GCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLC 144

Query: 306 KDGKM-DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG--CRH 362
            + +  + +N +L  M + G  P   +YN L+ G C   R   A EL   M   G  C  
Sbjct: 145 AEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPP 204

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
           DV SY+ +I+   K+   + A   Y EML   I P V+TYNT+++ L +   +  A+ ++
Sbjct: 205 DVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVL 264

Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
           ++M  N V+PD  T+ + + G C +G   EA+ + + + +   E    TY  L++ LCK 
Sbjct: 265 NRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKN 324

Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVT 541
           GR   A K+   +  +G  P+V+T ST++H    +G + +  D LLD+  +N + P    
Sbjct: 325 GRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRD-LLDLMVRNGIQPDRHV 383

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
           F  L+    ++      + +  KM  ++L   D+     ++D L K  +  + +
Sbjct: 384 FSILICACTKHQNVDVAMFVFSKMRQQRL-TPDVVTYGTLIDGLCKSGRVDDAM 436



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 122/233 (52%), Gaps = 3/233 (1%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P + S++ ++  L K    D   S +  +   G+ PD+   N ++  LCK      A  V
Sbjct: 204 PDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDV 263

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
           L R++++   P+ +T+N +++G C+ G+  EA  + +K+     +P+ VT+ +L++ LC+
Sbjct: 264 LNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCK 323

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
               + A K+ + M+       KP+V+TY++++ G    G + + ++LL  M    I P+
Sbjct: 324 NGRCIEARKILDSMIKRG---LKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPD 380

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
              ++ LIC      +   A  +F +M    + PDVVT+  +I+  CK G++D
Sbjct: 381 RHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVD 433



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 115/228 (50%), Gaps = 5/228 (2%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S +  ++   K G+  S++A   +  M++    P + ++  ++  L K +  D  + 
Sbjct: 205 DVVSYSTIIDGLFKEGD--SDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMD 262

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +  R+  NG+ PD    N +++  C  G +  A  +L ++      P+ VT+  L++ LC
Sbjct: 263 VLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLC 322

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GR +EA ++   +      PNV+T++TL++G   T+  LV ++   +++   G   +P
Sbjct: 323 KNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYA-TKGALVEMRDLLDLMVRNG--IQP 379

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
           D   ++ +I    K   VD A  +  +M+ + + P+V+TY +LI G C
Sbjct: 380 DRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLC 427



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 50/107 (46%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA    D MIK    P + +++ LL   A       +  L   +  NG+ PD  V ++LI
Sbjct: 329 EARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILI 388

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
               K      A  V  ++ +   TP+ VT+  LI+GLC  GR+ +A
Sbjct: 389 CACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 74/172 (43%), Gaps = 35/172 (20%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           ++A+   + M+K    P   ++  ++     + Q    + + +++ S+G+ PD      L
Sbjct: 258 DKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSL 317

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME------------- 169
           ++ LCK G    A  +L  +++    PN +T++ L++G   +G ++E             
Sbjct: 318 MDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGI 377

Query: 170 ----------------------AARLFKKLNVFACDPNVVTFNTLINGLCRT 199
                                 A  +F K+      P+VVT+ TLI+GLC++
Sbjct: 378 QPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKS 429


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 241/492 (48%), Gaps = 17/492 (3%)

Query: 36  LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
           L  H       I+ ++    K+G I  ++A+  FD M K         +   + +L +  
Sbjct: 5   LGRHRLAYRAQISSYV----KAGLI--DQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQS 58

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL----RSCFTPNT 151
           ++D     + R+   G   + F  +  I+ LCK+      FV++ ++L    R  + P+ 
Sbjct: 59  RFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVK----NFVLIEKLLEDMDRLGYVPDI 114

Query: 152 VTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEE 211
             +N  +N LC E ++  A  + + +     +P++VT+  +INGLCR      A++++  
Sbjct: 115 WAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRN 174

Query: 212 MVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCC 271
           MV +  +   PD     +++ GLC DG VD A EL +      I  +   YNSLI GFC 
Sbjct: 175 MVRKGFS---PDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQ 231

Query: 272 VDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
                +A+ +   M  NG +PD+VT+N ++NY C +  +++   L++ M + GV PD  +
Sbjct: 232 AGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYS 291

Query: 332 YNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREML 391
           YN L+ G C   R+ +A  + V+ +      DV SYN +I A C     + A  L+ EM 
Sbjct: 292 YNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMG 351

Query: 392 SERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVL 451
            + I P V+T+  L+    + G+   A KL+D+M    ++PD   + T +D LCK G + 
Sbjct: 352 GKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMG 411

Query: 452 EAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI 511
            A  VF  +        + +YN LINGLC+  R+  A  L+  +   GP PD VT   +I
Sbjct: 412 MAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLII 471

Query: 512 HWLCKEGQMDKA 523
             L  E ++  A
Sbjct: 472 GGLIWEKKLSVA 483



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 186/376 (49%), Gaps = 3/376 (0%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M++    P + ++TI++  L +  ++D+ V +++ +   G  PD      L+  LC  G 
Sbjct: 140 MVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGK 199

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A+ +    +R     +   +N LING C  G I +A  +   +    C+P++VT+N 
Sbjct: 200 VDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNV 259

Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
           L+N  C       A  L ++M  E   + +PDV +YN ++ GLCK   +DKA  +++   
Sbjct: 260 LLNYCCDELLLEEAENLMKKM--ERSGV-EPDVYSYNELLKGLCKANRLDKAYMMMVNKM 316

Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
           +     +V++YN++I   C     K A  LF EM   G+ PDVVTF  +I    ++G  +
Sbjct: 317 EAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSN 376

Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
              +LL+ M   G+ PD V Y +++D  C  G++  A  +F  MV  G   DV SYN LI
Sbjct: 377 IAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALI 436

Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
           N  C+  +V +A+ LY +M +    P  +T+  ++ GL     L  A ++ D+M      
Sbjct: 437 NGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFT 496

Query: 432 PDSFTFATYIDGLCKN 447
            D     T ++ +  N
Sbjct: 497 LDGAVSETLVNAIHSN 512



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 212/444 (47%), Gaps = 5/444 (1%)

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+   K G+   A      + +S     ++ +N  I  L  + R   A + + ++     
Sbjct: 16  ISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGF 75

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
             N  T++  I+GLC+ +N ++  KL E+M +  G +  PD+  YN  ++ LC +  +D 
Sbjct: 76  SLNSFTYSRFISGLCKVKNFVLIEKLLEDM-DRLGYV--PDIWAYNIYLNLLCCENQLDV 132

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A  ++  M ++   P+++TY  +I G C    +  A  ++  M+  G  PD     A++ 
Sbjct: 133 ALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVL 192

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
             C DGK+D    L    ++  +      YNSL++GFC  G I +A+ +   M   GC  
Sbjct: 193 GLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEP 252

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA-LKL 421
           D+ +YN+L+N  C +  +E+A  L ++M    + P V +YN LL GL +   L  A + +
Sbjct: 253 DLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMM 312

Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
           ++KM+   +  D  ++ T I  LC       A ++F+ +        + T+  LI    +
Sbjct: 313 VNKMEAKGLC-DVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLR 371

Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
            G    A KL  ++   G +PD V  +T++  LCK G+M  A+ +  DM      P  V+
Sbjct: 372 EGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVS 431

Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
           +  L+ G  + ++ S+ + L   M
Sbjct: 432 YNALINGLCRASRVSEAMHLYEDM 455



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 189/387 (48%), Gaps = 6/387 (1%)

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           ALK F+EM     + C+   + YN  I  L +    D A++   +M  +  + N  TY+ 
Sbjct: 28  ALKTFDEMTK---SNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSR 84

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
            I G C V ++   + L  +M   G  PD+  +N  +N  C + ++D    +++ M+++G
Sbjct: 85  FISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKG 144

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             PD VTY  +++G C  GR   A E++ +MV KG   D  +   L+   C D KV+ A 
Sbjct: 145 REPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAY 204

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            L    +  RI+ S   YN+L++G  Q G +  A  +I  M+ N   PD  T+   ++  
Sbjct: 205 ELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYC 264

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL-KTACKLFHRLQHKGPIPD 503
           C    + EA  + + +     E  + +YN L+ GLCK  RL K    + ++++ KG + D
Sbjct: 265 CDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKG-LCD 323

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           VV+ +T+I  LC      +A  L  +M  K   P  VTF  L++ F++    +    LL 
Sbjct: 324 VVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLD 383

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKK 590
           +M    L + D  L + +VD L K  K
Sbjct: 384 QMTGLGL-LPDRVLYTTIVDHLCKTGK 409



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 152/319 (47%), Gaps = 1/319 (0%)

Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
           R++  + + Y + I  +       +A   F EM  +  +   + +N  I    +  + D 
Sbjct: 3   RSLGRHRLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDL 62

Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
             +  + MI +G + ++ TY+  + G C V       +L   M   G   D+++YNI +N
Sbjct: 63  AEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLN 122

Query: 373 ANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             C + +++ A+ + + M+ +   P ++TY  +++GL + G    A+++   M      P
Sbjct: 123 LLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSP 182

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
           D       + GLC +G V  A ++       + +     YN LING C+ G +  A  + 
Sbjct: 183 DEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSII 242

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
             ++  G  PD+VT + ++++ C E  +++A +L+  ME     P   ++  LL+G  + 
Sbjct: 243 SFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKA 302

Query: 553 NKKSKV-VVLLHKMAAEKL 570
           N+  K  +++++KM A+ L
Sbjct: 303 NRLDKAYMMMVNKMEAKGL 321



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 60/136 (44%)

Query: 61  TSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLN 120
           +SN A    D M  +   P    +T ++  L K  +     S+F  +  +G+ PD+   N
Sbjct: 374 SSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYN 433

Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
            LIN LC+    S A  +   +      P+ VTF  +I GL  E ++  A R++ ++   
Sbjct: 434 ALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEK 493

Query: 181 ACDPNVVTFNTLINGL 196
               +     TL+N +
Sbjct: 494 GFTLDGAVSETLVNAI 509


>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 401

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 203/363 (55%), Gaps = 18/363 (4%)

Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-----CDPNVVTFNTLINGLCRTRNTL 203
           P+  ++N L+NGLC E R  EA  L   L++ A     C P+VV+++T+ING  +  +  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALEL---LHIMADDGGDCPPDVVSYSTVINGFFKEGD-- 103

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
                 ++M+++      P+VVTYNSII  LCK   VDKA E+L  M    + P+ +TYN
Sbjct: 104 -----LDKMLDQR---ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYN 155

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
           S++ GFC     KEA     +M  +GV+PDVVT+N++++Y CK+G+  +  ++ + M +R
Sbjct: 156 SIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR 215

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           G+ PD  TY +L+ G+   G +     L   MV  G   + Y ++IL+ A  K +KVE+A
Sbjct: 216 GLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEA 275

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
           + ++ +M  + + P+ +TY T++  L + G + DA+   ++M    + PDS  + + I  
Sbjct: 276 MLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHS 335

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
           LC      +A ++F  + +    L    +N +I+  CK GR+  + KLF  +   G  PD
Sbjct: 336 LCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395

Query: 504 VVT 506
           ++T
Sbjct: 396 IIT 398



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 186/344 (54%), Gaps = 8/344 (2%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+V ++N L+NGLC    +  AL+L   M ++ G  C PDVV+Y+++I+G  K+G +DK 
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADD-GGDCPPDVVSYSTVINGFFKEGDLDK- 106

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
                 M D+ I+PNV+TYNS+I   C      +A  +   M+ +GV PD +T+N++++ 
Sbjct: 107 ------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
            C  G+  +    L+ M   GV PD VTYNSLMD  C  GR + AR++F SM  +G + D
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
           + +Y  L+        + +   L   M+   I P+   ++ L+    +   + +A+ +  
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 280

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           KM+   + P++ T+ T ID LCK+G V +A+  F+ + +         YN LI+ LC   
Sbjct: 281 KMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFD 340

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           + + A +LF  +  +G     +  +++I   CKEG++ ++  L 
Sbjct: 341 KWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 176/327 (53%), Gaps = 9/327 (2%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN--PNVITYNSLICGFCCVDDWKEAK 279
           PDV +YN +++GLC +    +A ELL  M D   +  P+V++Y+++I GF     +KE  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF-----FKEGD 103

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
               +M+D  + P+VVT+N++I   CK   +DK   +L  M++ GV PD +TYNS++ GF
Sbjct: 104 --LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 340 CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV 399
           C  G+   A      M S G   DV +YN L++  CK+ +  +A  ++  M    ++P +
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
            TY TLL G    G L +   L+D M  N + P+ + F+  +    K   V EA+ VF  
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281

Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
           +R         TY  +I+ LCK GR++ A   F ++  +G  PD +  +++IH LC   +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341

Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLL 546
            +KA +L L+M  +    S + F +++
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSII 368



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 184/357 (51%), Gaps = 13/357 (3%)

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF--TPNTVTFNFLING 160
           +F  L   G+ PD+F  N+L+N LC    +  A  +L  +        P+ V+++ +ING
Sbjct: 39  VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
              EG +        K+      PNVVT+N++I  LC+ +    A+++   MV   G + 
Sbjct: 98  FFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVM- 148

Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
            PD +TYNSI+ G C  G   +A   L +M+   + P+V+TYNSL+   C      EA+ 
Sbjct: 149 -PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207

Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
           +F  M   G++PD+ T+  ++      G + +++ LL+LM++ G++P+   ++ L+  + 
Sbjct: 208 IFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 267

Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
              ++  A  +F  M  +G   +  +Y  +I+  CK  +VEDA+  + +M+ E +RP  I
Sbjct: 268 KQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSI 327

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
            YN+L+  L        A +L  +M    +   +  F + ID  CK G V+E+ ++F
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 34/296 (11%)

Query: 69  FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
            D M+  + SP + ++  ++  L K +  D  + +   +  +G+ PD    N +++  C 
Sbjct: 104 LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163

Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
            G    A V L ++      P+ VT+N L++ LC  GR  EA ++F  +      P++ T
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223

Query: 189 FNTLINGLCRTRNTLVALKLF-------------------------EEMVNEFGAI---- 219
           + TL+ G   T+  LV +                            +E V E   +    
Sbjct: 224 YGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282

Query: 220 ----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
                 P+ VTY ++ID LCK G V+ A     QM D  + P+ I YNSLI   C  D W
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVT 331
           ++A+ LF+EM+D G+    + FN++I+ +CK+G++ +  +L +LM++ GV PD +T
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 155/295 (52%), Gaps = 13/295 (4%)

Query: 311 DKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG--CRHDVYSYN 368
           +    + + +++RG+ PD  +YN L++G C   R   A EL   M   G  C  DV SY+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
            +IN   K+  ++       +ML +RI P+V+TYN++++ L +   +  A++++  M  +
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
            V+PD  T+ + + G C +G   EA+   + +R+   E  + TYN L++ LCK GR   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV-PSEVTFCTLLR 547
            K+F  +  +G  PD+ T  T++     +G + + +  LLD+  +N + P+   F  L+ 
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHG-LLDLMVRNGIHPNHYVFSILVC 264

Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
            + +  K  + +++  KM  + L  + ++  + V+D+L K  +  + +  F  ++
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT-VIDVLCKSGRVEDAMLYFEQMI 318



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 149/297 (50%), Gaps = 10/297 (3%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN--PDTVTYN 333
           ++A+ +F E++  G+ PDV ++N ++N  C + +  +   LL +M   G +  PD V+Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
           ++++GF   G + +       M+ +    +V +YN +I A CK Q V+ A+ +   M+  
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
            + P  +TYN+++ G    G   +A+  + KM+ + V PD  T+ + +D LCKNG   EA
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
            ++F ++     +  I TY  L+ G    G L     L   +   G  P+    S ++  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
             K+ ++++A  +   M  +   P+ VT+ T++    ++ +    ++   +M  E L
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 247/522 (47%), Gaps = 32/522 (6%)

Query: 56  KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
           +SG + +  A   F+ M    P P + +F  +L              L   +  +G+ PD
Sbjct: 195 RSGEVRA--AWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPD 252

Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           +   N+LI   C  G +  AF +   + RS   P  VT+N L++ LC EGR+ EA RLF 
Sbjct: 253 VCSYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFD 312

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM------------------VNEFG 217
           ++       N +TFN LI+G  ++     A   + EM                   ++FG
Sbjct: 313 EMAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFG 372

Query: 218 AICK----PDVVTYNSIIDGL-------CKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
              +     D+ + +   DGL       C D  +D A ELLL   ++ +   V  +N+LI
Sbjct: 373 YAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALI 432

Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
             +      +EA  L+  M   G+ P   TFN +I   C  G++D+   LLE M+ +G  
Sbjct: 433 AAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYC 492

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
             T ++   +D +   G    A + +  M + G + D  +++  IN  C+   V +A   
Sbjct: 493 LST-SFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQA 551

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
           + EM S  I P+ ITYN+++S L + GN+ +ALKL+  M+ + +VPD +T    IDGLC+
Sbjct: 552 FAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCR 611

Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
            G +     +   + +        TYN +IN  C+   + +A    +++   G  PD+ T
Sbjct: 612 EGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFT 671

Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRG 548
            +  +H LC+   +++A  LL ++ A +C P+ VT+ TL+ G
Sbjct: 672 YNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDG 713



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 224/514 (43%), Gaps = 69/514 (13%)

Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
            L L ++     G+ + A  VL R+ RS  TP+    + L+  L   G +  A  +F+++
Sbjct: 150 ALRLALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEM 209

Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
                 P++ TFN ++ G C      VA  L   M     A   PDV +YN +I G C  
Sbjct: 210 TAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIA---PDVCSYNILIKGHCVF 266

Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
           G+   A ++   M      P V+TYN L+   C      EA+ LF EM   G+Q + +TF
Sbjct: 267 GWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITF 326

Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL---------------------- 335
           N +I+   K G+MD+ +     M  RG+ PD+ T+N +                      
Sbjct: 327 NVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSS 386

Query: 336 ---MDG-------FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
               DG        C   R+  A EL +  + +G    V  +N LI A  K+   E+A  
Sbjct: 387 HMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASE 446

Query: 386 LYREMLSERIRPSVITYNTLLSGL----------------------------------FQ 411
           LYR M    + PS  T+N L+ GL                                  F+
Sbjct: 447 LYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFR 506

Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
            GN   ALK  D M    +  D   F+ YI+GLC+   V EA Q F  + +        T
Sbjct: 507 DGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNIT 566

Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
           YN +I+ LCK G +  A KL   ++  G +PD+ T + +I  LC+EG++   ++LLLDM 
Sbjct: 567 YNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMC 626

Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +    P  VT+ T++  + +    +  +  ++KM
Sbjct: 627 SNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKM 660



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 206/463 (44%), Gaps = 68/463 (14%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA   FD M ++       +F +L+   AK+ Q D   + ++ + + GL PD    N++ 
Sbjct: 306 EARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIA 365

Query: 124 NCLCKMGITS---------------------------------GAFVVLGRILRSCFTPN 150
               K G  +                                    ++LG I +    P 
Sbjct: 366 ARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQG--VPL 423

Query: 151 TVT-FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLF 209
            VT FN LI     EG   EA+ L++ +N     P+  TFN LI GLC       A  L 
Sbjct: 424 RVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLL 483

Query: 210 EEMV---------------------NEFGAI----------CKPDVVTYNSIIDGLCKDG 238
           E MV                     N  GA+           + D + +++ I+GLC+  
Sbjct: 484 EHMVSKGYCLSTSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLD 543

Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
            V++A +   +M  R I PN ITYNS+I   C   +  EA  L   M  +G+ PD+ T N
Sbjct: 544 CVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSN 603

Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
            +I+  C++GK+  V+ LL  M   G+ PDTVTYN++++ +C    ++ A      M+  
Sbjct: 604 ILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVA 663

Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
           GC  D+++YNI +++ C++  +  A  L  E+++    P+ +TYNTL+ G+     L  A
Sbjct: 664 GCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGICS-DVLDRA 722

Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           + L  ++      P++ T   ++   CK GF   A+   + +R
Sbjct: 723 MILTGRLIKMAFKPNTITLNVFLSHFCKQGFGNRALMWAEKLR 765



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 3/298 (1%)

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
           + A  +F EM   G +P + TFNAM+   C  G +   + LL +M + G+ PD  +YN L
Sbjct: 200 RAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNIL 259

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           + G C+ G    A ++F  M   GC   V +YNIL++  C + ++ +A  L+ EM    I
Sbjct: 260 IKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGI 319

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
           + + IT+N L+ G  + G +  A     +MQ   +VPDS TF        K G+   A Q
Sbjct: 320 QVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGY---AAQ 376

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +          +  +  + L+  LC   RL  A +L      +G    V   + +I    
Sbjct: 377 LVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYS 436

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
           KEG  ++A++L   M      PS  TF  L+ G     +  +  +LL  M ++   +S
Sbjct: 437 KEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS 494


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 250/519 (48%), Gaps = 5/519 (0%)

Query: 84  FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
           F  L++   K   ++  V LF  +    + PD  V  L I  LCK+G    A  +L  + 
Sbjct: 195 FDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMK 254

Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
              F     T+  +++ L   GR+ EA R+  ++       +V+   TL+ G C  +   
Sbjct: 255 EVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVG 314

Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
            AL LF+E + + G +  P  V Y  +I G  + G   KA EL  QM  + + P+    +
Sbjct: 315 NALNLFKETLKD-GIV--PTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELS 371

Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
            ++ G      WK+A CLF EM D+G+ PDV T+N +I+++C+  K+ +   L + M + 
Sbjct: 372 LVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKA 430

Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
           GV P   TYNSL+ G+C  G +  A +L+  M  +G + +V +Y  L+      +  ++A
Sbjct: 431 GVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNA 490

Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
             L  EM    +  +  TYN L++G+  V  + +   ++        +P   T+ + I+G
Sbjct: 491 YALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIING 550

Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
             K G +  A  V+Q +R       I TY   I+G C+ G    A K+ + ++ +G  PD
Sbjct: 551 FVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPD 610

Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
           +V  + +I+  C+EG M  A  LL+ +      P+ V + +L+ G+ +N    K V   +
Sbjct: 611 IVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGY-KNLNMMKEVSKFY 669

Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
           +   +  +V+D S  + ++D  SKD      L  +  ++
Sbjct: 670 ESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMM 708



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 242/481 (50%), Gaps = 4/481 (0%)

Query: 85  TILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILR 144
           T L+      ++    ++LFK    +G+ P   +  +LI    ++G+T  A+ +  ++  
Sbjct: 301 TTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTG 360

Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
               P+T   + ++ GL  + R  +A  LF+++      P+V T+N LI+  C+      
Sbjct: 361 QGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLRE 419

Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
           AL LF+ M     A  KP + TYNS++ G CK G +D+A +L  +M      PNV+TY +
Sbjct: 420 ALNLFDRMKK---AGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYIT 476

Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
           L+ G+    D+  A  L  EM  NGV  +  T+N +IN  C   ++ +V+ +L+  +  G
Sbjct: 477 LMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEG 536

Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
             P  +TYNS+++GF   G +  A  ++  M  KG   ++ +Y   I+  C+    + A+
Sbjct: 537 FIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMAL 596

Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
            +  ++    ++P ++ YN L++G  Q GN+  AL+L+  +  + + P++  + + I G 
Sbjct: 597 KMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGY 656

Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
                + E  + ++++          TY  LI+G  K G +  A +L+  +  KG IPD 
Sbjct: 657 KNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDA 716

Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
            T + + H LC+ G +D A  LL +M   +  P+   +  L+ G++++ K  +   L  +
Sbjct: 717 FTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDE 776

Query: 565 M 565
           M
Sbjct: 777 M 777



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 220/433 (50%), Gaps = 4/433 (0%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P     +++L  L  ++++   V LF+ +  +GL PD+F  N LI+  C+      A  +
Sbjct: 365 PSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNL 423

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
             R+ ++   P+  T+N L+ G C +G + EA +L+ ++ +    PNVVT+ TL+ G   
Sbjct: 424 FDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIA 483

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
            ++   A  L +EM  + G  C  +  TYN +I+G+C    V +   +L         P 
Sbjct: 484 KKDFDNAYALLDEM-KQNGVSC--NDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPT 540

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
           ++TYNS+I GF        A  ++ +M + G+ P+++T+ + I+  C+ G  D   ++L 
Sbjct: 541 MMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLN 600

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            + +RG+ PD V YN+L++GFC  G +S A +L V ++  G   +   YN LI       
Sbjct: 601 DVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLN 660

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
            +++    Y  M+   I     TY TL+ G  + GN+  AL+L  +M     +PD+FTF 
Sbjct: 661 MMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFT 720

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
               GLC++G +  A ++ + +R       +  YN LING  +  +L+ A +L   + + 
Sbjct: 721 ALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNM 780

Query: 499 GPIPDVVTCSTMI 511
           G  PD  T   ++
Sbjct: 781 GIQPDDTTYDILV 793



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 220/445 (49%), Gaps = 4/445 (0%)

Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
            L +++   GL P  F L+L++  L        A  +   +  S   P+  T+N LI+  
Sbjct: 353 ELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWH 411

Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           C   ++ EA  LF ++      P++ T+N+L+ G C+      A+KL+ EM  E     K
Sbjct: 412 CQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEG---FK 468

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           P+VVTY +++ G       D A  LL +MK   ++ N  TYN LI G C VD   E   +
Sbjct: 469 PNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGM 528

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
               M  G  P ++T+N++IN   K G M     + + M ++G+ P+ +TY S +DG+C 
Sbjct: 529 LKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCR 588

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            G    A ++   +  +G + D+ +YN LIN  C++  +  A+ L   +L + + P+ + 
Sbjct: 589 TGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVV 648

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           YN+L++G   +  + +  K  + M    +V D+ T+ T IDG  K+G V  A++++  + 
Sbjct: 649 YNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMM 708

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
                    T+  L +GLC+ G +  A KL   ++     P+V   + +I+   ++ ++ 
Sbjct: 709 AKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQ 768

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLL 546
           +A  L  +M      P + T+  L+
Sbjct: 769 EAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 185/361 (51%), Gaps = 4/361 (1%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EAV  +  M      P + ++  L+      K +D   +L   +  NG+  + +  N+L
Sbjct: 453 DEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVL 512

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           IN +C +        +L   +   F P  +T+N +ING    G +  A  +++++     
Sbjct: 513 INGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGL 572

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
            PN++T+ + I+G CRT  + +ALK+  + V   G   +PD+V YN++I+G C++G +  
Sbjct: 573 PPNIITYTSFIDGYCRTGCSDMALKMLND-VRRRG--LQPDIVAYNALINGFCQEGNMSH 629

Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
           A +LL+ +    + PN + YNSLI G+  ++  KE    +  M+  G+  D  T+  +I+
Sbjct: 630 ALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLID 689

Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
              KDG +     L   M+ +G  PD  T+ +L  G C  G I  A++L   M     R 
Sbjct: 690 GFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRP 749

Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF-QVGNLGDALKL 421
           +V+ YN+LIN   +D K+++A  L+ EML+  I+P   TY+ L+S  F +  N  D L  
Sbjct: 750 NVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFLEADNCADVLNP 809

Query: 422 I 422
           I
Sbjct: 810 I 810



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 162/344 (47%), Gaps = 1/344 (0%)

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD+ +   ++    +      A  L ++M+ R    +   +++L+         ++A  L
Sbjct: 155 PDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRL 214

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
           F EM    + PD   +   I   CK G   +  R+L  M + G +    TY +++D    
Sbjct: 215 FDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVK 274

Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
            GR+  A  +   M   G + DV     L+   C  Q+V +A+ L++E L + I P+ + 
Sbjct: 275 TGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVM 334

Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
           Y  L+ G  QVG    A +L  +M    ++P +F  +  + GL  +    +AV +F+ + 
Sbjct: 335 YGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA 394

Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
           +      + TYN LI+  C+  +L+ A  LF R++  G  P + T ++++   CK+G MD
Sbjct: 395 DSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMD 453

Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +A  L  +M  +   P+ VT+ TL+RG++          LL +M
Sbjct: 454 EAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 205/502 (40%), Gaps = 79/502 (15%)

Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
           +A  LF ++       +   F+ L++   +      A++LF+EM    GA   PD   Y 
Sbjct: 175 DALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMP---GAEIDPDQRVYA 231

Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
             I  LCK G   +A  +L +MK+   +    TY +++         +EA  +  EM D 
Sbjct: 232 LAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDA 291

Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
           G + DV+    ++   C   ++     L +  ++ G+ P  V Y  L+ G   VG   +A
Sbjct: 292 GKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKA 351

Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
            EL   M  +G     +  ++++     D++ +DAVCL+ EM    + P V TYN L+  
Sbjct: 352 YELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHW 410

Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ---------- 458
             Q   L +AL L D+M+   V P   T+ + + G CK G + EAV+++           
Sbjct: 411 HCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPN 470

Query: 459 -------------------------AIRNCKCELRIETYNCLINGLC------------- 480
                                     ++         TYN LING+C             
Sbjct: 471 VVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLK 530

Query: 481 ----------------------KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
                                 K G + +A  ++ +++ KG  P+++T ++ I   C+ G
Sbjct: 531 SFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTG 590

Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK-----VVVLLHKMAAEKLVVS 573
             D A  +L D+  +   P  V +  L+ GF Q    S      V++L   +A   +V +
Sbjct: 591 CSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYN 650

Query: 574 DLSLSSKVVDLLSKDKKYRECL 595
            L    K ++++ +  K+ E +
Sbjct: 651 SLITGYKNLNMMKEVSKFYESM 672



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 177/396 (44%), Gaps = 4/396 (1%)

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P++ +   L+    R  +   AL LF EM    G   + D   +++++    K+G  + A
Sbjct: 155 PDIKSRTDLLIRTARGSSAKDALALFMEMR---GRGYRVDAWMFDALMSACLKEGMHEDA 211

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             L  +M    I+P+   Y   I   C + D   A  +  EM + G      T+  M++ 
Sbjct: 212 VRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDV 271

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
             K G+M++  R+ + M   G   D +   +LM G+CL   +  A  LF   +  G    
Sbjct: 272 LVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPT 331

Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              Y +LI    +    + A  L R+M  + + PS    + +L GL       DA+ L +
Sbjct: 332 KVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFE 391

Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
           +M  +  +PD FT+   I   C+   + EA+ +F  ++    +  I TYN L+ G CK G
Sbjct: 392 EMA-DSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKG 450

Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
            +  A KL+  +  +G  P+VVT  T++     +   D A  LL +M+      ++ T+ 
Sbjct: 451 CMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYN 510

Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
            L+ G    ++  +V  +L    +E  + + ++ +S
Sbjct: 511 VLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNS 546



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
           S A + +  MV++G   D+ S   L+    +    +DA+ L+ EM     R     ++ L
Sbjct: 139 SAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDAL 198

Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
           +S   + G   DA++L D+M   ++ PD   +A  I  LCK G    A+++ + ++    
Sbjct: 199 MSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGF 258

Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
           +    TY  +++ L K GR++ A ++   ++  G   DV+  +T++   C   ++  A +
Sbjct: 259 DTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALN 318

Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
           L  +      VP++V +  L+RG  Q     K   L  +M  + L+ S   LS  +  LL
Sbjct: 319 LFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLL 378

Query: 586 SKDKKYRECLNQFRHL 601
           + D+++++ +  F  +
Sbjct: 379 N-DRRWKDAVCLFEEM 393


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 231/451 (51%), Gaps = 5/451 (1%)

Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
           T + LI+GLC + ++ +A       N     P++V+ NT+++  C+     VA   F  M
Sbjct: 239 TTSILIHGLCEQSKLEDAISFLHDSNK-VVGPSIVSINTIMSKFCKVGLIDVARSXFCLM 297

Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
           V   G +   D  +YN ++ GLC  G +D+A      M+   + P+V+TYN+L  GF  +
Sbjct: 298 VKN-GLL--HDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLL 354

Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
                A+ +  +M+  G+ PD+VT+  +I  +C+ G +++  +L +  + RG   + + Y
Sbjct: 355 GLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFY 414

Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
           N L+   C VGRI  A  LF  M +     D   Y+ILI+  CK+  V+ A  LY +M  
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRL 474

Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
           +R  P       +L GLF+ GN+ +A    D     D++ D   +   IDG  +   + E
Sbjct: 475 KRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAE 534

Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
           A+Q++  +        + T+N LING C+ G L  A K+   ++ KG +P VVT +T+++
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMN 594

Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
             C+ G M +    L +MEA   VP+ VT+  L++G  + NK  + + LL  M A+ L+ 
Sbjct: 595 AYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLP 654

Query: 573 SDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
             ++ ++ ++    K K+  + L  +  +L 
Sbjct: 655 DSVTYNT-IIQCFCKGKEITKALQLYNMMLL 684



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 243/515 (47%), Gaps = 38/515 (7%)

Query: 83  SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
           S+ ILL  L      D  +     +  +G+ PD+   N L      +G+ SGA  V+ ++
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367

Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
           L     P+ VT+  LI G C  G I EA +L ++        NV+ +N L++ LC+    
Sbjct: 368 LLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRI 427

Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM------------ 250
             AL LF+EM        +PD + Y+ +I GLCK+GFV +A +L  QM            
Sbjct: 428 EEALTLFDEMET---LRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQ 484

Query: 251 --------KDRNIN---------------PNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
                   K+ NI+                +V+ YN +I G+  +D   EA  L+ +M++
Sbjct: 485 RAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIE 544

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
            G+ P VVTFN +IN  C+ G + +  ++LE++  +G+ P  VTY +LM+ +C VG +  
Sbjct: 545 RGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQE 604

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
                  M +        +Y +LI   C+  K+ +++ L   M ++ + P  +TYNT++ 
Sbjct: 605 MFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQ 664

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
              +   +  AL+L + M L++  P   T+   I+ LC  G + +  ++  +I +    L
Sbjct: 665 CFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITL 724

Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           +  TY  +I   C  G++  A   F+++  KG +  +   S +I+ LCK G + +A    
Sbjct: 725 KKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFF 784

Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
           + M ++   P      T+L  F Q    S V   L
Sbjct: 785 VMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFL 819



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 248/495 (50%), Gaps = 12/495 (2%)

Query: 98  DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
           D ++  F+  +SNGL     V ++L     +  +   A  V+ ++    F  +  T+N L
Sbjct: 157 DLLLEKFRNWDSNGL-----VWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSL 211

Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
           ++ +     + +   ++ ++ V     +  T + LI+GLC       A+      +++  
Sbjct: 212 LHNMRHTDIMWD---VYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISF----LHDSN 264

Query: 218 AICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
            +  P +V+ N+I+   CK G +D A+     M    +  +  +YN L+ G C      E
Sbjct: 265 KVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDE 324

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A     +M  +GV+PDVVT+N +       G M    ++++ M+ +G+NPD VTY +L+ 
Sbjct: 325 ALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLIC 384

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
           G C +G I  A +L    +S+G + +V  YN+L++  CK  ++E+A+ L+ EM + R+ P
Sbjct: 385 GHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
             I Y+ L+ GL + G +  A +L ++M+L    P  F     + GL KNG + EA   F
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYF 504

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
                      +  YN +I+G  ++  +  A +L++++  +G  P VVT +T+I+  C+ 
Sbjct: 505 DTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRR 564

Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
           G + +A  +L  +  K  VPS VT+ TL+  + +     ++   LH+M A  +V + ++ 
Sbjct: 565 GDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTY 624

Query: 578 SSKVVDLLSKDKKYR 592
           +  +  L  ++K + 
Sbjct: 625 TVLIKGLCRQNKMHE 639



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 224/488 (45%), Gaps = 32/488 (6%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+ F D M K    P + ++  L               + +++   GL PDL     L
Sbjct: 323 DEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTL 382

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I   C+MG    A  +    L   F  N + +N L++ LC  GRI EA  LF ++     
Sbjct: 383 ICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRL 442

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMV----------------------------N 214
           +P+ + ++ LI+GLC+      A +L+E+M                             N
Sbjct: 443 EPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARN 502

Query: 215 EFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC 270
            F    +     DVV YN +IDG  +   + +A +L  +M +R I P+V+T+N+LI GFC
Sbjct: 503 YFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFC 562

Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
              D  EA+ +   +   G+ P VVT+  ++N  C+ G M ++   L  M    V P  V
Sbjct: 563 RRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHV 622

Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
           TY  L+ G C   ++  + +L   M +KG   D  +YN +I   CK +++  A+ LY  M
Sbjct: 623 TYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMM 682

Query: 391 LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFV 450
           L     P+ +TY  L++ L   G+L D  +++  ++  ++     T+ T I   C  G V
Sbjct: 683 LLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQV 742

Query: 451 LEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM 510
            +A+  F  +      + I  Y+ +IN LCK G +  A   F  +  +G  PD   C T+
Sbjct: 743 SKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTV 802

Query: 511 IHWLCKEG 518
           ++   ++G
Sbjct: 803 LNAFHQQG 810



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 243/501 (48%), Gaps = 13/501 (2%)

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + S   +++   K    D   S F  +  NGL  D F  N+L++ LC  G    A  
Sbjct: 268 GPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALG 327

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
               + +    P+ VT+N L  G    G +  A ++ +K+ +   +P++VT+ TLI G C
Sbjct: 328 FTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHC 387

Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
           +  N   ALKL +E ++      K +V+ YN ++  LCK G +++A  L  +M+   + P
Sbjct: 388 QMGNIEEALKLRQETLSRG---FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444

Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
           + I Y+ LI G C     + A  L+ +M      P      A++    K+G + +     
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYF 504

Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
           +   +  +  D V YN ++DG+  +  I+ A +L+  M+ +G    V ++N LIN  C+ 
Sbjct: 505 DTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRR 564

Query: 378 QKVEDAVCLYREMLSERIR-----PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVP 432
             + +A    R+ML E IR     PSV+TY TL++   +VGN+ +    + +M+ N VVP
Sbjct: 565 GDLMEA----RKML-EVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVP 619

Query: 433 DSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
              T+   I GLC+   + E++Q+ + +          TYN +I   CK   +  A +L+
Sbjct: 620 THVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLY 679

Query: 493 HRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQN 552
           + +      P  VT   +I+ LC  G +   + +++ +E +N    + T+ T+++     
Sbjct: 680 NMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAK 739

Query: 553 NKKSKVVVLLHKMAAEKLVVS 573
            + SK +   ++M A+  V+S
Sbjct: 740 GQVSKALGYFNQMLAKGFVIS 760



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 134/296 (45%), Gaps = 3/296 (1%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           EA+  +  MI+   +P + +F  L+    +         + + +   GL P +     L+
Sbjct: 534 EAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           N  C++G     F  L  +  +   P  VT+  LI GLC + ++ E+ +L + +      
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL 653

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           P+ VT+NT+I   C+ +    AL+L+  M+      C P  VTY  +I+ LC  G +   
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMMLLHN---CDPTQVTYKVLINALCIFGDLKDV 710

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             +++ ++DRNI     TY ++I   C      +A   F +M+  G    +  ++A+IN 
Sbjct: 711 DRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINR 770

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
            CK G + +      +M+  GV PD     ++++ F   G  S   E    +V  G
Sbjct: 771 LCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 212/436 (48%), Gaps = 9/436 (2%)

Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
           P+      L+  LC+ G    A   +  + R    P+  T+N +I+ LC   RI  A   
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67

Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
           F+ +     +P+VVT+NTL+ GLC+      A  LF  M    GA   P  VTY ++ID 
Sbjct: 68  FETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSME---GAGITPSDVTYTTLIDV 120

Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
            CK    + A  LL  M  R  +P V +Y S+I G C      +A  LF EM   G +PD
Sbjct: 121 FCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPD 180

Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
            VT+N +I+  C   ++ +   LL +M++    PD +T+ +L++G C   RI  A  LF 
Sbjct: 181 RVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQ 240

Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
            M  +GC  D+ ++ +L++  C  +K+  A+ + R   +     +VI Y  +   L +  
Sbjct: 241 GMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPA--CPEAVILYTPIFRELGRRR 298

Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
               A +L+ KM    V P+  T+  +  GL      + A + F+ +     E  +  YN
Sbjct: 299 GFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYN 358

Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
            L++G CK  RL  A K+   +   G  P++VT +T++   C++G+++   +LL  M ++
Sbjct: 359 VLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSR 418

Query: 534 NCVPSEVTFCTLLRGF 549
              P   T+ TL+ G 
Sbjct: 419 GRQPDVATWSTLVAGL 434



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 211/449 (46%), Gaps = 9/449 (2%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   S+  L+  L +  + D   S    +    L PD+F  N++I+ LCK    S A   
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI-- 65

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
                 +   P+ VT+N L+ GLC  GR+ +A  LF  +      P+ VT+ TLI+  C+
Sbjct: 66  --EFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 123

Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
                 A  L + M +     C P V +Y SII+GLCK+  VD+A +L  +MK     P+
Sbjct: 124 MCQFETAYGLLQLMASR---KCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPD 180

Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
            +TYN+LI G C      EAK L   M++N  QPD +TF A+I   C   ++ +   L +
Sbjct: 181 RVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQ 240

Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
            M ++G  PD VT+  L+   C+  ++  A  L V      C   V  Y  +     + +
Sbjct: 241 GMAKQGCAPDLVTHTVLVSKLCIRRKLRPA--LSVVRNYPACPEAVILYTPIFRELGRRR 298

Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
             + A  L ++M    + P+V+TY     GL        A +   +M    + PD   + 
Sbjct: 299 GFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYN 358

Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
             +DG CK   +  A ++ + +        I TYN L+   C+ G+++   +L H +  +
Sbjct: 359 VLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSR 418

Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
           G  PDV T ST++  L + GQ+D A   L
Sbjct: 419 GRQPDVATWSTLVAGLFRVGQVDAAYSFL 447



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 189/397 (47%), Gaps = 46/397 (11%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           + A+ FF+ M    P P + ++  LL  L KN +     SLF  +   G+ P       L
Sbjct: 62  SRAIEFFETM----PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 117

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
           I+  CKM     A+ +L  +     +P   ++  +INGLC   ++ +A +LF+++ +  C
Sbjct: 118 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 177

Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPDVVTYNSIIDGLCKDGFVD 241
            P+ VT+NTLI+GLC  +    A  L   MV N F    +PD +T+ ++I+GLC    + 
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSF----QPDKITFTALIEGLCTTDRIK 233

Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFC-----------------CVD----------- 273
           +A  L   M  +   P+++T+  L+   C                 C +           
Sbjct: 234 EAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRE 293

Query: 274 -----DWKEAKCLFIEMMDNGVQPDVVTFNAMIN--YNCKDGKMDKVNRLLELMIQRGVN 326
                 +  A  L  +M   GV P+VVT+ A      + K+G   +  R    M+++G+ 
Sbjct: 294 LGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGM--RAYREFRRMLEQGIE 351

Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
           PD V YN L+DGFC   R+  A ++   M   G   ++ +YN L+  +C+  KVE    L
Sbjct: 352 PDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGEL 411

Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
              M+S   +P V T++TL++GLF+VG +  A   ++
Sbjct: 412 LHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLN 448



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 165/335 (49%), Gaps = 8/335 (2%)

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
           F   CKP+ ++Y  ++  LC+ G +DKA   + +M    + P+V TYN +I   C     
Sbjct: 2   FSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 61

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
             A    IE  +   +PDVVT+N ++   CK+G++ +   L   M   G+ P  VTY +L
Sbjct: 62  SRA----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 117

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +D FC + +   A  L   M S+ C   VYSY  +IN  CK++KV+ A  L+ EM     
Sbjct: 118 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 177

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
           +P  +TYNTL+ GL     L +A  L+  M  N   PD  TF   I+GLC    + EA  
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFV 237

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMI-HWL 514
           +FQ +    C   + T+  L++ LC   +L+ A  +   +++    P+ V   T I   L
Sbjct: 238 LFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSV---VRNYPACPEAVILYTPIFREL 294

Query: 515 CKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
            +    D+A  LL  M  +   P+ VT+    +G 
Sbjct: 295 GRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGL 329



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 34/320 (10%)

Query: 72  MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
           M   K SP + S+  ++  L KN++ D    LF+ +   G  PD    N LI+ LC    
Sbjct: 137 MASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQR 196

Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
              A  +L  ++ + F P+ +TF  LI GLC   RI EA  LF+ +    C P++VT   
Sbjct: 197 LHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTV 256

Query: 192 LINGLCRTRNTLVALK-------------LFEEMVNEFGAI-----------------CK 221
           L++ LC  R    AL              L+  +  E G                     
Sbjct: 257 LVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVA 316

Query: 222 PDVVTYNSIIDGL--CKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAK 279
           P+VVTY +   GL   K+G   +A     +M ++ I P+++ YN L+ GFC  +    A+
Sbjct: 317 PNVVTYTAFFKGLGDWKEGM--RAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAE 374

Query: 280 CLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF 339
            +   M  +G+ P++VT+N ++ ++C+ GK++ +  LL  M+ RG  PD  T+++L+ G 
Sbjct: 375 KMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 434

Query: 340 CLVGRISRARELFVSMVSKG 359
             VG++  A       +S+G
Sbjct: 435 FRVGQVDAAYSFLNLAMSQG 454



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 137/275 (49%), Gaps = 5/275 (1%)

Query: 326 NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVC 385
            P+ ++Y  L+   C  G+I +A      M  +    DV++YN++I+  CK +++  A+ 
Sbjct: 7   KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66

Query: 386 LYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLC 445
            +  M      P V+TYNTLL GL + G +  A  L   M+   + P   T+ T ID  C
Sbjct: 67  FFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122

Query: 446 KNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
           K      A  + Q + + KC   + +Y  +INGLCK  ++  A +LF  ++  G  PD V
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182

Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           T +T+IH LC + ++ +A DLL  M   +  P ++TF  L+ G    ++  +  VL   M
Sbjct: 183 TYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 242

Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRH 600
           A +     DL   + +V  L   +K R  L+  R+
Sbjct: 243 AKQG-CAPDLVTHTVLVSKLCIRRKLRPALSVVRN 276



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGF 449
           + S+  +P+ ++Y  L+  L + G +  A   I +M    +VPD FT+   ID LCK   
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 450 VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCST 509
           +  A++ F+ +     E  + TYN L+ GLCK GR+  AC LF  ++  G  P  VT +T
Sbjct: 61  ISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 510 MIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
           +I   CK  Q + A  LL  M ++ C P+  ++C+++ G  +N K  +   L  +M
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEM 172


>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
 gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
          Length = 438

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 209/411 (50%), Gaps = 5/411 (1%)

Query: 52  NDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG 111
            D  ++G   +  A +  D +        + SF   LT +A++      VSLF R+   G
Sbjct: 29  QDLGRAGGSGTEGARHVLDELPLRGWGASIYSFNRTLTDVARDSPA-AAVSLFNRMARAG 87

Query: 112 ---LFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM 168
              + PDL   ++LI C C+ G     F  LG +++  F    +TF  L+ GLCA+ R  
Sbjct: 88  ADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTS 147

Query: 169 EAARL-FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
           +A  +  +++   +C P+V +   L+ GLC    +  AL+L   M ++ G    PDVV+Y
Sbjct: 148 DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 207

Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
            ++I+G  K+G  DKA     +M DR I+PNV+TY+S+I   C      +A  +   M+ 
Sbjct: 208 TTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVK 267

Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
           NGV PD +T+N++++  C  G+  +    L+ M   GV P+ VTY SLM+  C  GR + 
Sbjct: 268 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTE 327

Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
           AR++F SM  +G   D+ +Y  L+        + +   L   M+   I+P    +N L+ 
Sbjct: 328 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 387

Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
              +   +  A+ +  KM+ + + P+   + T ID LCK+G V +A+  F+
Sbjct: 388 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 438



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 183/414 (44%), Gaps = 43/414 (10%)

Query: 163 AEGRIMEAAR-LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
           A G   E AR +  +L +     ++ +FN  +  + R  +   A+ LF  M         
Sbjct: 34  AGGSGTEGARHVLDELPLRGWGASIYSFNRTLTDVARD-SPAAAVSLFNRMARAGADEVT 92

Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
           PD+ TY+ +I   C+ G +D                          GF  + +       
Sbjct: 93  PDLCTYSILIGCCCRAGRLD-------------------------LGFAALGN------- 120

Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKM-DKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
              ++  G + + +TF  ++   C D +  D ++ +L  M +    PD  +   L+ G C
Sbjct: 121 ---VIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLC 177

Query: 341 LVGRISRARELFVSMV---SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
              R   A EL   M      G   DV SY  +IN   K+   + A   Y EML  RI P
Sbjct: 178 DENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISP 237

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
           +V+TY+++++ L +   +  A+++++ M  N V+PD  T+ + + G C +G   EA+   
Sbjct: 238 NVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 297

Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
           + +R+   E  + TY  L+N LCK GR   A K+F  +  +G  PD+ T  T++     +
Sbjct: 298 KKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATK 357

Query: 518 GQMDKANDLLLDMEAKNCV-PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
           G + + +  LLD+  +N + P    F  L+  + +  K  + +++  KM    L
Sbjct: 358 GALVEMH-ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 410



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 112/235 (47%), Gaps = 8/235 (3%)

Query: 43  DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
           D  S    +N   K G+  S++A   +  M+  + SP + +++ ++  L K +  D  + 
Sbjct: 203 DVVSYTTVINGFFKEGD--SDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAME 260

Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
           +   +  NG+ PD    N +++  C  G    A   L ++      PN VT+  L+N LC
Sbjct: 261 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLC 320

Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
             GR  EA ++F  +     +P++ T+ TL+ G   T+  LV +    +++   G   +P
Sbjct: 321 KNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYA-TKGALVEMHALLDLMVRNG--IQP 377

Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI---CGFCCVDD 274
           D   +N +I    K   VD+A  +  +M+   +NPNV+ Y ++I   C    VDD
Sbjct: 378 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDD 432



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 8/158 (5%)

Query: 23  WCSFGRPPNPKTDLSSHHFKDGT-----SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKP 77
           +CS G+P      L      DG      +    +N   K+G  T  EA   FD M K   
Sbjct: 284 YCSSGQPKEAIGTLKKMR-SDGVEPNVVTYRSLMNYLCKNGRCT--EARKIFDSMTKRGL 340

Query: 78  SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
            P + ++  LL   A       + +L   +  NG+ PD  V N+LI    K      A +
Sbjct: 341 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 400

Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
           V  ++ +    PN V +  +I+ LC  G + +A   F+
Sbjct: 401 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 438


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 252/511 (49%), Gaps = 28/511 (5%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P  ++++ ++T L +  + +    LF+ + S G+ PD++   +LI+  CK G+   A   
Sbjct: 286 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSW 345

Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
              +     + N VT+  L++      ++ +A+ +F ++    C PN +T++ L++GLC+
Sbjct: 346 FDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCK 405

Query: 199 TRNTLVALKLFEEMVNEFGAI-------------CKPDVVTYNSIIDGLCKDGFVDKAKE 245
                 A +++ +++     +               P+VVTY ++IDGLCK   V  A+E
Sbjct: 406 AGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 465

Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
           LL  M      PN I Y++LI GFC V     A+ +F+ M   G  P V T+ ++I+   
Sbjct: 466 LLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMF 525

Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
           KD ++D   ++L  M++    P+ VTY +++DG C +G   +A +L   M  KGC  +V 
Sbjct: 526 KDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVV 585

Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
           +Y  LI+   K  KV+ ++ L+ +M ++   P+ +TY  L++     G L +A  L+ +M
Sbjct: 586 TYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 645

Query: 426 QLNDVVPDSFTFATYIDGLCK--NGF---VLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
           +          +  Y+ G C    GF    + ++ + + + +         Y  LI+   
Sbjct: 646 KQT-------YWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFS 698

Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVT---CSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
           K GRL+ A +L   +       ++ +    +++I  LC   Q++KA +L  ++  K  VP
Sbjct: 699 KAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVP 758

Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
               F  L++G ++ NK ++ + L + +  E
Sbjct: 759 ELSVFVCLIKGLIKVNKWNEALQLCYSICDE 789



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 242/506 (47%), Gaps = 25/506 (4%)

Query: 63  NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
           +EA+ F   M      P + ++  LLT   K KQ      +   +   G  P+  + N L
Sbjct: 124 DEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSL 183

Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME------AARLFKK 176
           ++  C       A+ +L R+      P  V +N  I  +C    +        A +++++
Sbjct: 184 VHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEE 243

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +   +C  N V        LC      +A ++ + M+ + G +  PD  TY+ +I  LC+
Sbjct: 244 MLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGK-GFV--PDTSTYSKVITFLCE 300

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
              V+KA  L  +MK   +NP+V TY  LI  FC     ++A+  F EM   G   +VVT
Sbjct: 301 AMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVT 360

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           + A+++   K  ++ + + +   MI  G  P+T+TY++L+DG C  G I +A E++  ++
Sbjct: 361 YTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLI 420

Query: 357 S-----------KGCRHD-----VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
                       +G   D     V +Y  LI+  CK  KV DA  L   MLS    P+ I
Sbjct: 421 GTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHI 480

Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
            Y+ L+ G  +VG + +A ++  +M     +P   T+ + ID + K+  +  A++V   +
Sbjct: 481 IYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQM 540

Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
               C   + TY  +I+GLC++G  + A KL   ++ KG  P+VVT + +I  L K G++
Sbjct: 541 VESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKV 600

Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLL 546
           D +  L + M  K C P+ VT+  L+
Sbjct: 601 DLSLQLFIQMSTKGCAPNYVTYRVLI 626



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 152/580 (26%), Positives = 255/580 (43%), Gaps = 64/580 (11%)

Query: 79  PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
           P   ++  L+ +LA   Q D    + K ++ +G   D F +      LCK G  S A V+
Sbjct: 38  PSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM 97

Query: 139 L-----------------GRILRSCF---------------TPNTVTFNFLINGLCAEGR 166
           +                 G +  S F                PN VT+  L+ G   + +
Sbjct: 98  IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQ 157

Query: 167 IMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVT 226
           +    R+   +    C+PN   FN+L++  C  R+   A KL + M +     C P  V 
Sbjct: 158 LGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMAD---CGCPPGYVA 214

Query: 227 YNSIIDGLCKD---------GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKE 277
           YN  I  +C              +K  E +L         N   +   +CG   +  +  
Sbjct: 215 YNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCG---MGKFDM 271

Query: 278 AKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMD 337
           A  +   MM  G  PD  T++ +I + C+  K++K   L + M   GVNPD  TY  L+D
Sbjct: 272 AFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILID 331

Query: 338 GFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRP 397
            FC  G I +AR  F  M S GC  +V +Y  L++A  K +++  A  ++  M+     P
Sbjct: 332 SFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPP 391

Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKM----------------QLNDVVPDSFTFATYI 441
           + ITY+ L+ GL + G +  A ++  K+                  + + P+  T+   I
Sbjct: 392 NTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALI 451

Query: 442 DGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPI 501
           DGLCK   V++A ++  A+ +  CE     Y+ LI+G CK+G++  A ++F R+   G +
Sbjct: 452 DGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYL 511

Query: 502 PDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVL 561
           P V T +++I  + K+ ++D A  +L  M   +C P+ VT+  ++ G  +  +  K + L
Sbjct: 512 PTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKL 571

Query: 562 LHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
           L  M  EK    ++   + ++D L K  K    L  F  +
Sbjct: 572 L-SMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQM 610



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 234/485 (48%), Gaps = 27/485 (5%)

Query: 96  QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
           ++D    + K +   G  PD    + +I  LC+      AF++   +      P+  T+ 
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327

Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
            LI+  C  G I +A   F ++    C  NVVT+  L++   + +    A  +F  M++ 
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID- 386

Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
             A C P+ +TY++++DGLCK G + KA E+  ++   + N                D +
Sbjct: 387 --AGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGS-------------DFY 431

Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
            E K        + + P+VVT+ A+I+  CK  K+     LL+ M+  G  P+ + Y++L
Sbjct: 432 FEGK------HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDAL 485

Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
           +DGFC VG+I  A+E+F+ M   G    V++Y  LI+A  KD++++ A+ +  +M+    
Sbjct: 486 IDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSC 545

Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
            P+V+TY  ++ GL ++G    ALKL+  M+     P+  T+   IDGL K+G V  ++Q
Sbjct: 546 TPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQ 605

Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
           +F  +    C     TY  LIN  C  G L  A  L   ++       +    +++    
Sbjct: 606 LFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFS 665

Query: 516 KEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
           K  +   +  LL ++E+   VP    +  L+  F +  +  + +  LHK   E  + S L
Sbjct: 666 K--KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALE-LHKEMME--LSSSL 720

Query: 576 SLSSK 580
           +++SK
Sbjct: 721 NITSK 725



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 174/368 (47%), Gaps = 11/368 (2%)

Query: 57  SGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDL 116
           S N+ S+   ++F+       +P + ++  L+  L K  +      L   + SNG  P+ 
Sbjct: 423 SDNVGSD---FYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNH 479

Query: 117 FVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
            + + LI+  CK+G    A  V  R+ +  + P   T+  LI+ +  + R+  A ++  +
Sbjct: 480 IIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQ 539

Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
           +   +C PNVVT+  +I+GLCR      ALKL   M+ E G  C P+VVTY ++IDGL K
Sbjct: 540 MVESSCTPNVVTYTAMIDGLCRIGECQKALKLL-SMMEEKG--CSPNVVTYTALIDGLGK 596

Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
            G VD + +L +QM  +   PN +TY  LI   C      EA  L  EM        +  
Sbjct: 597 SGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQG 656

Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
           + +++    K  K      LLE +   G  P    Y  L+D F   GR+  A EL   M+
Sbjct: 657 YCSVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMM 714

Query: 357 SKGCRHDVYS---YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
                 ++ S   Y  LI A C   ++E A  LY E+  + + P +  +  L+ GL +V 
Sbjct: 715 ELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVN 774

Query: 414 NLGDALKL 421
              +AL+L
Sbjct: 775 KWNEALQL 782



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 183/420 (43%), Gaps = 13/420 (3%)

Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
           +L  F   P+  T+N L+  L       +  ++ +EM +E G  C  D  T       LC
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEM-SESG-FCM-DKFTVGCFAQALC 86

Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
           K+G   +  + L+ ++  +   + +    +I G      + EA      M  N   P+VV
Sbjct: 87  KEG---RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVV 143

Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
           T+  ++    K  ++    R++ +M++ G NP+   +NSL+  +C       A +L   M
Sbjct: 144 TYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRM 203

Query: 356 VSKGCRHDVYSYNILINANCKDQKVED------AVCLYREMLSERIRPSVITYNTLLSGL 409
              GC     +YNI I + C  +++        A  +Y EML+     + +        L
Sbjct: 204 ADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCL 263

Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRI 469
             +G    A ++I  M     VPD+ T++  I  LC+   V +A  +FQ +++      +
Sbjct: 264 CGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDV 323

Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
            TY  LI+  CK G ++ A   F  ++  G   +VVT + ++H   K  Q+ +A+D+   
Sbjct: 324 YTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383

Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM-AAEKLVVSDLSLSSKVVDLLSKD 588
           M    C P+ +T+  L+ G  +  +  K   +  K+      V SD     K  D ++ +
Sbjct: 384 MIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPN 443



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 156/335 (46%), Gaps = 8/335 (2%)

Query: 64  EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
           +A    D M+     P    +  L+    K  + D    +F R++  G  P +     LI
Sbjct: 462 DAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLI 521

Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
           + + K      A  VL +++ S  TPN VT+  +I+GLC  G   +A +L   +    C 
Sbjct: 522 DAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCS 581

Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
           PNVVT+  LI+GL ++    ++L+LF +M  +    C P+ VTY  +I+  C  G +D+A
Sbjct: 582 PNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG---CAPNYVTYRVLINHCCAAGLLDEA 638

Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
             LL +MK       +  Y S++ GF     +  +  L  E+  +G  P    +  +I+ 
Sbjct: 639 HSLLSEMKQTYWPKYLQGYCSVVQGFS--KKFIASLGLLEELESHGTVPIAPVYGLLIDN 696

Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVT---YNSLMDGFCLVGRISRARELFVSMVSKGC 360
             K G++++   L + M++   + +  +   Y SL+   CL  ++ +A EL+  +  KG 
Sbjct: 697 FSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGV 756

Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
             ++  +  LI    K  K  +A+ L   +  E +
Sbjct: 757 VPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.326    0.139    0.428 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,793,638,395
Number of Sequences: 23463169
Number of extensions: 347725511
Number of successful extensions: 1277777
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7879
Number of HSP's successfully gapped in prelim test: 4745
Number of HSP's that attempted gapping in prelim test: 949876
Number of HSP's gapped (non-prelim): 85934
length of query: 603
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 454
effective length of database: 8,863,183,186
effective search space: 4023885166444
effective search space used: 4023885166444
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)