BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037409
(603 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 319/535 (59%), Gaps = 6/535 (1%)
Query: 53 DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
+R +SG +I ++A+ F MI+ +P P + F+ + +A+ KQ++ V+ K+L N
Sbjct: 58 ERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117
Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
G+ +++ LN++INC C+ T A+ VLG++++ + P+T TFN LI GL EG++ EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
L ++ C P+VVT+N+++NG+CR+ +T +AL L +M K DV TY++I
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN---VKADVFTYSTI 234
Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
ID LC+DG +D A L +M+ + I +V+TYNSL+ G C W + L +M+ +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
P+V+TFN +++ K+GK+ + N L + MI RG++P+ +TYN+LMDG+C+ R+S A
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
+ MV C D+ ++ LI C ++V+D + ++R + + + +TY+ L+ G
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
Q G + A +L +M + V+PD T+ +DGLC NG + +A+++F+ ++ K +L I
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
Y +I G+CK G+++ A LF L KG P+V+T + MI LCK+G + +AN LL M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 531 EAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
E P++ T+ TL+R +++ + L+ +M + +D S V+D+L
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF-SADASSIKMVIDML 588
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 156/352 (44%), Gaps = 38/352 (10%)
Query: 253 RNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDK 312
R I P+++ SL C + C E + + V F + D K D
Sbjct: 15 RLIQPHLLKTGSLRTDLLCTISSFFSSC---ERDFSSISNGNVCFRERLRSGIVDIKKDD 71
Query: 313 VNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILIN 372
L + MI+ P V ++ + + + + G H++Y+ NI+IN
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 373 ANCK-----------------------------------DQKVEDAVCLYREMLSERIRP 397
C+ + KV +AV L M+ +P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
V+TYN++++G+ + G+ AL L+ KM+ +V D FT++T ID LC++G + A+ +F
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 458 QAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKE 517
+ + + + TYN L+ GLCK G+ L + + +P+V+T + ++ KE
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 518 GQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK 569
G++ +AN+L +M + P+ +T+ TL+ G+ N+ S+ +L M K
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 212/595 (35%), Positives = 324/595 (54%), Gaps = 40/595 (6%)
Query: 40 HFKDGTSIAKFLNDRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQY 97
H+ T +R ++G +I N+A+ F+ MI+ +P P F L + +A+ KQY
Sbjct: 27 HYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY 86
Query: 98 DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFL 157
D V+ K + NG+ D++ + ++INC C+ AF VLGR + + P+T+TF+ L
Sbjct: 87 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 146
Query: 158 INGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFG 217
+NG C EGR+ EA L ++ P++VT +TLINGLC AL L + MV E+G
Sbjct: 147 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV-EYG 205
Query: 218 -------------AICK--------------------PDVVTYNSIIDGLCKDGFVDKAK 244
+CK VV Y+ +ID LCKDG D A
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
L +M+ + I +V+TY+SLI G C W + + EM+ + PDVVTF+A+I+
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
K+GK+ + L MI RG+ PDT+TYNSL+DGFC + A ++F MVSKGC D+
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
+Y+ILIN+ CK ++V+D + L+RE+ S+ + P+ ITYNTL+ G Q G L A +L +
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
M V P T+ +DGLC NG + +A+++F+ ++ + L I YN +I+G+C +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
+ A LF L KG PDVVT + MI LCK+G + +A+ L M+ C P + T+
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
L+R + + V L+ +M +D S V+D+LS DK + + L+
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGF-SADSSTIKMVIDMLSDRRLDKSFLDMLS 619
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 200/572 (34%), Positives = 318/572 (55%), Gaps = 42/572 (7%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
+EAV F M+K +P P + F+ LL+ +AK K++D V+S +++ G+ +L+ N++
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
INCLC+ S A +LG++++ + P+ VT N L+NG C RI EA L ++
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG---- 238
P+ VTF TL++GL + A+ L E MV + C+PD+VTY ++I+GLCK G
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG---CQPDLVTYGAVINGLCKRGEPDL 223
Query: 239 -------------------------------FVDKAKELLLQMKDRNINPNVITYNSLIC 267
VD A L +M ++ I P+V TY+SLI
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
C W +A L +M++ + P+VVTFN++I+ K+GK+ + +L + MIQR ++P
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
+ VTYNSL++GFC+ R+ A+++F MVSK C DV +YN LIN CK +KV D + L+
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
R+M + + +TY TL+ G FQ + +A + +M + V P+ T+ T +DGLCKN
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
G + +A+ VF+ ++ K E I TYN + G+CK G+++ LF L KG PDV+
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
+TMI CK+G ++A L + M+ +P T+ TL+R +++ K+ L+ +M +
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Query: 568 EKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
+ D S V D+L DK + E L+
Sbjct: 584 CRF-AGDASTYGLVTDMLHDGRLDKGFLEVLS 614
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 230/436 (52%), Gaps = 4/436 (0%)
Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
++ EA LF ++ P++V F+ L++ + + + + + E+M E + ++
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM--EILGVSH-NLY 101
Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEM 285
TYN +I+ LC+ + A +L +M P+++T NSL+ GFC + EA L +M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 286 MDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRI 345
++ G QPD VTF +++ + K + L+E M+ +G PD VTY ++++G C G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 346 SRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTL 405
A L M DV Y+ +I++ CK + V+DA+ L+ EM ++ IRP V TY++L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 406 LSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKC 465
+S L G DA +L+ M + P+ TF + ID K G ++EA ++F +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 466 ELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAND 525
+ I TYN LING C RL A ++F + K +PDVVT +T+I+ CK ++ +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 526 LLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLL 585
L DM + V + VT+ TL+ GF Q + ++ +M ++ V ++ + ++D L
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGL 460
Query: 586 SKDKKYRECLNQFRHL 601
K+ K + + F +L
Sbjct: 461 CKNGKLEKAMVVFEYL 476
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 354 bits (909), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 316/574 (55%), Gaps = 41/574 (7%)
Query: 53 DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
+R +SG +I +++A+ F MI +P P + F+ L + +AK KQYD V++L K++
Sbjct: 58 ERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK 117
Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
G+ +L+ L+++INC C+ AF +G+I++ + PNT+TF+ LINGLC EGR+ EA
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS- 229
L ++ P+++T NTL+NGLC + A+ L ++MV E+G C+P+ VTY
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-EYG--CQPNAVTYGPV 234
Query: 230 ----------------------------------IIDGLCKDGFVDKAKELLLQMKDRNI 255
IIDGLCK G +D A L +M+ + I
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
N+ITYN LI GFC W + L +M+ + P+VVTF+ +I+ K+GK+ +
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
L + MI RG+ PDT+TY SL+DGFC + +A ++ MVSKGC ++ ++NILIN C
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
K +++D + L+R+M + +TYNTL+ G ++G L A +L +M V P+
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
T+ +DGLC NG +A+++F+ I K EL I YN +I+G+C ++ A LF L
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
KG P V T + MI LCK+G + +A L ME P T+ L+R + +
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 594
Query: 556 SKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
+K V L+ ++ V D S V+D+LS +
Sbjct: 595 TKSVKLIEELKRCGFSV-DASTIKMVIDMLSDGR 627
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 1/296 (0%)
Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
D K D L MI P + ++ L + L M KG H++Y+
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
+I+IN C+ +K+ A +++ P+ IT++TL++GL G + +AL+L+D+M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
PD T T ++GLC +G EA+ + + C+ TY ++N +CK G+
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
A +L +++ + D V S +I LCK G +D A +L +ME K + +T+ L+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
GF + LL M K+ + ++ S ++D K+ K RE + ++
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV-LIDSFVKEGKLREAEELHKEMI 360
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
SY + + D K +DA+ L+R+M+ R P+VI ++ L S + + L L +M
Sbjct: 55 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114
Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
+L + + +T + I+ C+ + A I E T++ LINGLC GR+
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174
Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
A +L R+ G PD++T +T+++ LC G+ +A L+ M C P+ VT+ +
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
L ++ + + + LL KM E+ + D S ++D L K N F +
Sbjct: 235 LNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
N A F M+ K P + ++ ILL L N + + + +F+++ + + D+ + N++
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I+ +C A+ + + P T+N +I GLC +G + EA LF+K+
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGAICKPDVVTYNSIIDGLCKDGFVD 241
P+ T+N LI + ++KL EE+ F + + + DG K F+D
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLD 634
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 352 bits (903), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 205/607 (33%), Positives = 333/607 (54%), Gaps = 42/607 (6%)
Query: 28 RPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTIL 87
R +P L +F + + R+ ++ ++AV F M++ +P P + F L
Sbjct: 27 RKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKL 86
Query: 88 LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
L+ +AK ++D V+SL +R+ + + DL+ N+LINC C+ A VLG++++ +
Sbjct: 87 LSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY 146
Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
P+ VT + L+NG C RI EA L ++ V PN VTFNTLI+GL A+
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL-------------------- 247
L + MV C+PD+ TY ++++GLCK G +D A LL
Sbjct: 207 LIDRMVARG---CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 248 ---------------LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQP 292
+M ++ I PNV+TYNSLI C W +A L +M++ + P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
+VVTF+A+I+ K+GK+ + +L + MI+R ++PD TY+SL++GFC+ R+ A+ +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
M+SK C +V +YN LI CK ++VE+ + L+REM + + +TYNTL+ GLFQ
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
G+ A K+ KM + V PD T++ +DGLCK G + +A+ VF+ ++ K E I TY
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
N +I G+CK G+++ LF L KG P+V+ +TMI C++G ++A+ L +M+
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DK 589
+P+ T+ TL+R +++ K+ L+ +M + V D S S V+++L +K
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF-VGDASTISMVINMLHDGRLEK 622
Query: 590 KYRECLN 596
Y E L+
Sbjct: 623 SYLEMLS 629
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 217/442 (49%), Gaps = 41/442 (9%)
Query: 199 TRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
+RN L+ LKL ++ V+ FG + + P +V +N ++ + K D L +M++
Sbjct: 52 SRNVLLDLKL-DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110
Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
I+ ++ +YN LI FC A + +MM G +PD+VT ++++N C ++ +
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
L++ M P+TVT+N+L+ G L + S A L MV++GC+ D+++Y ++N
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 375 CKD-----------------------------------QKVEDAVCLYREMLSERIRPSV 399
CK + V DA+ L+ EM ++ IRP+V
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
+TYN+L+ L G DA +L+ M + P+ TF+ ID K G ++EA +++
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
+ + I TY+ LING C RL A +F + K P+VVT +T+I CK +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
+++ +L +M + V + VT+ TL++G Q + KM ++ V D+ S
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYS 469
Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
++D L K K + L F +L
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYL 491
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 351 bits (901), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 205/587 (34%), Positives = 324/587 (55%), Gaps = 38/587 (6%)
Query: 53 DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
D+ SG I +++AV F MI+ +P P + F L + +AK KQY+ V++L K++ S
Sbjct: 58 DKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESK 117
Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
G+ ++ L+++INC C+ S AF +G+I++ + P+TV FN L+NGLC E R+ EA
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV------NE--FGAI--- 219
L ++ P ++T NTL+NGLC A+ L + MV NE +G +
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 220 -CKP--------------------DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
CK D V Y+ IIDGLCKDG +D A L +M+ + +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
+ITYN+LI GFC W + L +M+ + P+VVTF+ +I+ K+GK+ + ++LL+
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
M+QRG+ P+T+TYNSL+DGFC R+ A ++ M+SKGC D+ ++NILIN CK
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
+++D + L+REM + + +TYNTL+ G Q G L A KL +M V PD ++
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
+DGLC NG + +A+++F I K EL I Y +I+G+C ++ A LF L K
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
G D + MI LC++ + KA+ L M + P E+T+ L+R + ++ +
Sbjct: 538 GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTA 597
Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYRECLNQFRHLL 602
L+ +M + +D+S V+++LS DK + + L+ R L
Sbjct: 598 AELIEEMKSSGF-PADVSTVKMVINMLSSGELDKSFLDMLSTTRASL 643
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 1/236 (0%)
Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
SY +++ K +DAV L+R+M+ R P+VI +N L S + + L L +M
Sbjct: 55 SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114
Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
+ + +T + I+ C+ + A I E +N L+NGLC R+
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
A +L R+ G P ++T +T+++ LC G++ A L+ M P+EVT+ +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
L ++ + + + LL KM E+ + D S ++D L KD N F +
Sbjct: 235 LNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 348 bits (893), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 204/568 (35%), Positives = 313/568 (55%), Gaps = 35/568 (6%)
Query: 53 DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
+R +SG +I ++AV F M + +P P + F+ L +++A+ KQYD V+ L K++
Sbjct: 42 ERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK 101
Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
G+ +L+ L+++INC C+ S AF +G+I++ + P+TVTF+ LINGLC EGR+ EA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV------NE--FGAI--- 219
L ++ P ++T N L+NGLC A+ L + MV NE +G +
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 220 -CKP--------------------DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
CK D V Y+ IIDGLCKDG +D A L +M+ + +
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
+I Y +LI GFC W + L +M+ + PDVV F+A+I+ K+GK+ + L +
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
MIQRG++PDTVTY SL+DGFC ++ +A + MVSKGC ++ ++NILIN CK
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
++D + L+R+M + +TYNTL+ G ++G L A +L +M V PD ++
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
+DGLC NG +A+++F+ I K EL I YN +I+G+C ++ A LF L K
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
G PDV T + MI LCK+G + +A+ L ME P+ T+ L+R + +K
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
L+ ++ V D S VVD+LS
Sbjct: 582 AKLIEEIKRCGFSV-DASTVKMVVDMLS 608
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 7/311 (2%)
Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR---AREL 351
V++ + D K D L + M + P + ++ L F +V R + +L
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRL---FSVVARTKQYDLVLDL 94
Query: 352 FVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ 411
M KG H++Y+ +I+IN C+ +K+ A +++ P +T++TL++GL
Sbjct: 95 CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCL 154
Query: 412 VGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIET 471
G + +AL+L+D+M P T ++GLC NG V +AV + + + T
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
Query: 472 YNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
Y ++ +CK G+ A +L +++ + D V S +I LCK+G +D A +L +ME
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 532 AKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKY 591
K + + TL+RGF + LL M K + D+ S ++D K+ K
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK-ITPDVVAFSALIDCFVKEGKL 333
Query: 592 RECLNQFRHLL 602
RE + ++
Sbjct: 334 REAEELHKEMI 344
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Query: 65 AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
A F M+ + P + S+ ILL L N + + + +F+++ + + D+ + N++I+
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
+C A+ + + P+ T+N +I GLC +G + EA LF+K+ P
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVN-EFGAICKPDVVTYNSIIDGLCKDGFVD 241
N T+N LI + + KL EE+ F + + + DG K F+D
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLD 618
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 190/538 (35%), Positives = 307/538 (57%), Gaps = 38/538 (7%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
++AV F M+K +P P + F+ LL+ +AK ++D V+SL +++ + G+ + + ++L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
INC C+ A VLG++++ + PN VT + L+NG C RI EA L ++ V
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 183 DPNVVTFNTLI-----------------------------------NGLCRTRNTLVALK 207
PN VTFNTLI NGLC+ +T +A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
L +M E G + +P V+ YN+IIDGLCK +D A L +M+ + I PNV+TY+SLI
Sbjct: 243 LLNKM--EQGKL-EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
C W +A L +M++ + PDV TF+A+I+ K+GK+ + +L + M++R ++P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
VTY+SL++GFC+ R+ A+++F MVSK C DV +YN LI CK ++VE+ + ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
REM + + +TYN L+ GLFQ G+ A ++ +M + V P+ T+ T +DGLCKN
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
G + +A+ VF+ ++ K E I TYN +I G+CK G+++ LF L KG PDVV
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
+TMI C++G ++A+ L +M+ +P+ + TL+R +++ + L+ +M
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 207/367 (56%), Gaps = 3/367 (0%)
Query: 72 MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
M + K PG+ + ++ L K K D ++LFK + + G+ P++ + LI+CLC G
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
S A +L ++ P+ TF+ LI+ EG+++EA +L+ ++ + DP++VT+++
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
LING C A ++FE MV++ C PDVVTYN++I G CK V++ E+ +M
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
R + N +TYN LI G D A+ +F EM+ +GV P+++T+N +++ CK+GK++
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 483
Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
K + E + + + P TYN +++G C G++ +LF ++ KG + DV +YN +I
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
+ C+ E+A L++EM + P+ YNTL+ + G+ + +LI +M+
Sbjct: 544 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
Query: 432 PDSFTFA 438
D+ T
Sbjct: 604 GDASTIG 610
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 224/436 (51%), Gaps = 3/436 (0%)
Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
A + G +++S P+ + F+ L++ + + L +++ N T++ LIN
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
CR +AL + +M+ + G +P++VT +S+++G C + +A L+ QM
Sbjct: 125 CFCRRSQLPLALAVLGKMM-KLGY--EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
PN +T+N+LI G + EA L M+ G QPD+VT+ ++N CK G D
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
LL M Q + P + YN+++DG C + A LF M +KG R +V +Y+ LI+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
C + DA L +M+ +I P V T++ L+ + G L +A KL D+M + P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
T+++ I+G C + + EA Q+F+ + + C + TYN LI G CK R++ ++F
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
+ +G + + VT + +I L + G D A ++ +M + P+ +T+ TLL G +N K
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 555 KSKVVVLLHKMAAEKL 570
K +V+ + K+
Sbjct: 482 LEKAMVVFEYLQRSKM 497
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 212/402 (52%), Gaps = 3/402 (0%)
Query: 62 SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
++EA+ D M+ P + ++ +++ L K D +L ++ L P + + N
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
+I+ LCK A + + PN VT++ LI+ LC GR +A+RL +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
+P+V TF+ LI+ + + A KL++EMV P +VTY+S+I+G C +D
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR---SIDPSIVTYSSLINGFCMHDRLD 378
Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
+AK++ M ++ P+V+TYN+LI GFC +E +F EM G+ + VT+N +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
+ G D + + M+ GV P+ +TYN+L+DG C G++ +A +F +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
+Y+YNI+I CK KVED L+ + + ++P V+ YNT++SG + G+ +A L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
+M+ + +P+S + T I ++G + ++ + +R+C
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 219/442 (49%), Gaps = 41/442 (9%)
Query: 199 TRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
+RN L LKL ++ V FG + K P ++ ++ ++ + K D L QM++
Sbjct: 53 SRNGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
I N TY+ LI FC A + +MM G +P++VT ++++N C ++ +
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
L++ M G P+TVT+N+L+ G L + S A L MV+KGC+ D+ +Y +++N
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 375 CKD-----------------------------------QKVEDAVCLYREMLSERIRPSV 399
CK + ++DA+ L++EM ++ IRP+V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 400 ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQA 459
+TY++L+S L G DA +L+ M + PD FTF+ ID K G ++EA +++
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 460 IRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQ 519
+ + I TY+ LING C RL A ++F + K PDVVT +T+I CK +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 520 MDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
+++ ++ +M + V + VT+ L++G Q + +M ++ V ++ +
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYN 470
Query: 580 KVVDLLSKDKKYRECLNQFRHL 601
++D L K+ K + + F +L
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYL 492
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/572 (34%), Positives = 315/572 (55%), Gaps = 42/572 (7%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
++A+ F M+K +P P + F LL+ +AK K++D V+SL +++ + L+ N+L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM-------------- 168
INC C+ S A +LG++++ + P+ VT + L+NG C RI
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 169 ---------------------EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
EA L ++ C PN+VT+ ++NGLC+ +T +AL
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 208 LFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLIC 267
L +M A + DVV +N+IID LCK VD A L +M+ + I PNV+TY+SLI
Sbjct: 247 LLNKME---AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
C W +A L +M++ + P++VTFNA+I+ K+GK + +L + MI+R ++P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
D TYNSL++GFC+ R+ +A+++F MVSK C DV +YN LI CK ++VED L+
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
REM + +TY TL+ GLF G+ +A K+ +M + V PD T++ +DGLC N
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
G + +A++VF ++ + +L I Y +I G+CK G++ LF L KG P+VVT
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
+TMI LC + + +A LL M+ +P+ T+ TL+R +++ K+ L+ +M +
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Query: 568 EKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
+ V D S V ++L DK + + L+
Sbjct: 604 CRF-VGDASTIGLVANMLHDGRLDKSFLDMLS 634
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 220/403 (54%), Gaps = 3/403 (0%)
Query: 62 SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
++EAV D M++ P + ++ +++ L K D ++L ++ + + D+ + N
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
+I+ LCK A + + PN VT++ LI+ LC+ GR +A++L +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
+PN+VTFN LI+ + + A KL+++M+ PD+ TYNS+++G C +D
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS---IDPDIFTYNSLVNGFCMHDRLD 382
Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
KAK++ M ++ P+V+TYN+LI GFC ++ LF EM G+ D VT+ +I
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
DG D ++ + M+ GV PD +TY+ L+DG C G++ +A E+F M +
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
D+Y Y +I CK KV+D L+ + + ++P+V+TYNT++SGL L +A L
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
+ KM+ + +P+S T+ T I ++G + ++ + +R+C+
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 210/441 (47%), Gaps = 41/441 (9%)
Query: 200 RNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
RN L +KL ++ + FG + K P +V +N ++ + K D L +M+ I
Sbjct: 58 RNGLHDMKL-DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI 116
Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
+ TYN LI FC A L +MM G +P +VT ++++N C ++
Sbjct: 117 VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR-------------- 361
L++ M++ G PDT+T+ +L+ G L + S A L MV +GC+
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 362 ---------------------HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
DV +N +I++ CK + V+DA+ L++EM ++ IRP+V+
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
TY++L+S L G DA +L+ M + P+ TF ID K G +EA +++ +
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
+ I TYN L+NG C RL A ++F + K PDVVT +T+I CK ++
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
+ +L +M + V VT+ TL++G + + +M ++ V D+ S
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSI 475
Query: 581 VVDLLSKDKKYRECLNQFRHL 601
++D L + K + L F ++
Sbjct: 476 LLDGLCNNGKLEKALEVFDYM 496
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 155/343 (45%), Gaps = 23/343 (6%)
Query: 256 NPNVITYNSLICGFCCVDDWKEA----KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
NP + + +CG C W A + E++ NG+ D K+D
Sbjct: 26 NPRIAPSSIDLCGMCY---WGRAFSSGSGDYREILRNGLH---------------DMKLD 67
Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
L M++ P V +N L+ + + L M H +Y+YNILI
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
N C+ ++ A+ L +M+ PS++T ++LL+G + DA+ L+D+M
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
PD+ TF T I GL + EAV + + C+ + TY ++NGLCK G A L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
++++ DVV +T+I LCK +D A +L +ME K P+ VT+ +L+
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 552 NNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
+ S LL M EK + +L + ++D K+ K+ E
Sbjct: 308 YGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKEGKFVEA 349
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 313/558 (56%), Gaps = 39/558 (6%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
++AV F M+K +P P + F+ LL+ +AK ++D V+SL +++ + G+ +L+ ++L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
INC C+ S A VL ++++ + P+ VT N L+NG C RI +A L ++
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
P+ TFNTLI+GL R A+ L + MV + C+PD+VTY +++GLCK G +D
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG---CQPDLVTYGIVVNGLCKRGDIDL 239
Query: 243 AKELL-----------------------------------LQMKDRNINPNVITYNSLIC 267
A LL +M ++ I PNV+TYNSLI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
C W +A L +M++ + P+VVTF+A+I+ K+GK+ + +L + MI+R ++P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
D TY+SL++GFC+ R+ A+ +F M+SK C +V +YN LI CK ++V++ + L+
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
REM + + +TY TL+ G FQ +A + +M + V+PD T++ +DGLC N
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
G V A+ VF+ ++ K E I TYN +I G+CK G+++ LF L KG P+VVT
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
+TM+ C++G ++A+ L +M+ + +P T+ TL+R +++ K+ L+ +M +
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Query: 568 EKLVVSDLSLSSKVVDLL 585
+ V D S V ++L
Sbjct: 600 CRF-VGDASTIGLVTNML 616
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 309/563 (54%), Gaps = 42/563 (7%)
Query: 72 MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
M+K +P P + F LL+ +AK K++D V+SL +++ G+ +L+ N+LINC C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIM----------------------- 168
S A +LG++++ + P+ VT + L+NG C RI
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 169 ------------EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
EA L ++ C PN+VT+ ++NGLC+ + +A L +M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME--- 177
Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
A + DVV +N+IID LCK VD A L +M+ + I PNV+TY+SLI C W
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
+A L +M++ + P++VTFNA+I+ K+GK + +L + MI+R ++PD TYNSL+
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
+GFC+ R+ +A+++F MVSK C D+ +YN LI CK ++VED L+REM +
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
+TY TL+ GLF G+ +A K+ +M + V PD T++ +DGLC NG + +A++V
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
F ++ + +L I Y +I G+CK G++ LF L KG P+VVT +TMI LC
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
+ + +A LL M+ +P T+ TL+R +++ K+ L+ +M + + V D S
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF-VGDAS 536
Query: 577 LSSKVVDLLSK---DKKYRECLN 596
V ++L DK + + L+
Sbjct: 537 TIGLVANMLHDGRLDKSFLDMLS 559
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 240/468 (51%), Gaps = 7/468 (1%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
++AV D M++M P +FT L+ L + + V+L R+ G P+L ++
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
+N LCK G AF +L ++ + + V FN +I+ LC + +A LFK++
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
PNVVT+++LI+ LC A +L +M+ + P++VT+N++ID K+G +
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK---KINPNLVTFNALIDAFVKEGKFVE 273
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
A++L M R+I+P++ TYNSLI GFC D +AK +F M+ PD+ T+N +I
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
CK +++ L M RG+ DTVTY +L+ G G A+++F MVS G
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
D+ +Y+IL++ C + K+E A+ ++ M I+ + Y T++ G+ + G + D L
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
+ L V P+ T+ T I GLC + EA + + ++ TYN LI +
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513
Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
G + +L ++ + D T + + L +G++DK+ LDM
Sbjct: 514 GDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS---FLDM 557
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 217/403 (53%), Gaps = 3/403 (0%)
Query: 62 SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
++EAV D M++ P + ++ +++ L K D +L ++ + + D+ + N
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
+I+ LCK A + + PN VT++ LI+ LC+ GR +A++L +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
+PN+VTFN LI+ + + A KL ++M+ PD+ TYNS+I+G C +D
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS---IDPDIFTYNSLINGFCMHDRLD 307
Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
KAK++ M ++ P++ TYN+LI GFC ++ LF EM G+ D VT+ +I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
DG D ++ + M+ GV PD +TY+ L+DG C G++ +A E+F M +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
D+Y Y +I CK KV+D L+ + + ++P+V+TYNT++SGL L +A L
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
+ KM+ + +PDS T+ T I ++G + ++ + +R+C+
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 335 bits (860), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 205/632 (32%), Positives = 333/632 (52%), Gaps = 49/632 (7%)
Query: 7 HRSFSLASKAGYRCNFWCSFGRPPNPKTDLS-------SHHFKDGTSIAKFLNDRHKSGN 59
RS SL +K + G PP + + F + + + S
Sbjct: 2 QRSISLTAKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDI 61
Query: 60 ITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
I ++AV F M+K +P P + F LL+ +AK +++ V+SL +++ + G+ DL+
Sbjct: 62 IKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-- 177
++ INC C+ S A VL ++++ + P+ VT + L+NG C RI +A L ++
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 178 -----NVF----------------------------ACDPNVVTFNTLINGLCRTRNTLV 204
+ F C P++VT+ T++NGLC+ + +
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
AL L +M A K +VV +N+IID LCK V+ A +L +M+ + I PNV+TYNS
Sbjct: 242 ALNLLNKME---AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
LI C W +A L M++ + P+VVTFNA+I+ K+GK+ + +L E MIQR
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
++PDT+TYN L++GFC+ R+ A+++F MVSK C ++ +YN LIN CK ++VED V
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
L+REM + + +TY T++ G FQ G+ A + +M N V D T++ + GL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
C G + A+ +F+ ++ + EL I YN +I G+CK G++ A LF L K PDV
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDV 535
Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
VT +TMI LC + + +A+DL M+ +P+ T+ TL+R +++ ++ L+ +
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595
Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
M + V D S S V ++L + + LN
Sbjct: 596 MRSSGF-VGDASTISLVTNMLHDGRLDKSFLN 626
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 306/541 (56%), Gaps = 38/541 (7%)
Query: 60 ITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVL 119
I ++AV F M+K +P P + F LL+ +AK +++ V+SL +++ + G+ DL+
Sbjct: 62 IKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-- 177
++ INC C+ S A VL ++++ + P+ VT + L+NG C RI +A L ++
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 178 -----NVF----------------------------ACDPNVVTFNTLINGLCRTRNTLV 204
+ F C P++VT+ T++NGLC+ + +
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
AL L ++M E G I + DVV YN+IIDGLCK +D A L +M ++ I P+V TY+S
Sbjct: 242 ALSLLKKM--EKGKI-EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
LI C W +A L +M++ + P+VVTF+A+I+ K+GK+ + +L + MI+R
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
++PD TY+SL++GFC+ R+ A+ +F M+SK C +V +Y+ LI CK ++VE+ +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
L+REM + + +TY TL+ G FQ + +A + +M V P+ T+ +DGL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
CKNG + +A+ VF+ ++ E I TYN +I G+CK G+++ +LF L KG P+V
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
+ +TMI C++G ++A+ LL M+ +P+ T+ TL+R +++ + L+ +
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 565 M 565
M
Sbjct: 599 M 599
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 216/402 (53%), Gaps = 3/402 (0%)
Query: 62 SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
++EAV D M++ P + ++ ++ L K D +SL K++ + D+ + N
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
+I+ LCK A + + P+ T++ LI+ LC GR +A+RL +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
+PNVVTF+ LI+ + + A KL++EM+ PD+ TY+S+I+G C +D
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR---SIDPDIFTYSSLINGFCMHDRLD 380
Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
+AK + M ++ PNV+TY++LI GFC +E LF EM G+ + VT+ +I
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
+ + D + + M+ GV+P+ +TYN L+DG C G++++A +F +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
D+Y+YNI+I CK KVED L+ + + + P+VI YNT++SG + G+ +A L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
+ KM+ + +P+S T+ T I ++G + ++ + +R+C
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 211/383 (55%), Gaps = 5/383 (1%)
Query: 56 KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
K G+I + A+ M K K + + ++ L K K D ++LF +++ G+ PD
Sbjct: 235 KRGDI--DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
+F + LI+CLC G S A +L ++ PN VTF+ LI+ EG+++EA +L+
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
++ + DP++ T+++LING C A +FE M+++ C P+VVTY+++I G C
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK---DCFPNVVTYSTLIKGFC 409
Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
K V++ EL +M R + N +TY +LI GF D A+ +F +M+ GV P+++
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
T+N +++ CK+GK+ K + E + + + PD TYN +++G C G++ ELF ++
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
KG +V +YN +I+ C+ E+A L ++M + P+ TYNTL+ + G+
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589
Query: 416 GDALKLIDKMQLNDVVPDSFTFA 438
+ +LI +M+ D+ T
Sbjct: 590 EASAELIKEMRSCGFAGDASTIG 612
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 197/376 (52%), Gaps = 4/376 (1%)
Query: 200 RNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
RN L + ++ V+ FG + K P +V +N ++ + K + L QM+ I
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
+ ++ TY+ I FC A + +MM G +PD+VT ++++N C ++
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
L++ M++ G PDT T+ +L+ G L + S A L MV +GC+ D+ +Y ++N C
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
K ++ A+ L ++M +I V+ YNT++ GL + ++ DAL L +M + PD F
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
T+++ I LC G +A ++ + K + T++ LI+ K G+L A KL+ +
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKK 555
+ PD+ T S++I+ C ++D+A + M +K+C P+ VT+ TL++GF + +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 556 SKVVVLLHKMAAEKLV 571
+ + L +M+ LV
Sbjct: 415 EEGMELFREMSQRGLV 430
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 326 bits (835), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/514 (34%), Positives = 289/514 (56%), Gaps = 38/514 (7%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
++A+ F M+K +P P + F LL+ +AK K++D V+SL +++ G+ +L+ N+L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
INC C+ S A +LG++++ + P+ VT + L+NG C RI +A L ++
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
P+ +TF TLI+GL A+ L + MV C+P++VTY +++GLCK G +D
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG---CQPNLVTYGVVVNGLCKRGDIDL 243
Query: 243 AKELL-----------------------------------LQMKDRNINPNVITYNSLIC 267
A LL +M+++ + PNVITY+SLI
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 268 GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
C + W +A L +M++ + P+VVTFNA+I+ K+GK+ + +L + MI+R ++P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
D TY+SL++GFC+ R+ A+ +F M+SK C +V +YN LIN CK +++++ V L+
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
REM + + +TY TL+ G FQ + +A + +M + V P+ T+ T +DGLCKN
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
G + +A+ VF+ ++ K E I TYN +I G+CK G+++ LF L KG PDV+
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
+TMI C++G ++A+ L M +P T
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 215 bits (547), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 222/436 (50%), Gaps = 3/436 (0%)
Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
A + G +++S P+ FN L++ + + L +K+ N+ T+N LIN
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
CR +AL L +M+ + G +P +VT +S+++G C + A L+ QM +
Sbjct: 129 CFCRRSQISLALALLGKMM-KLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
P+ IT+ +LI G + EA L M+ G QP++VT+ ++N CK G +D
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
LL M + + V Y++++D C A LF M +KG R +V +Y+ LI+
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
C ++ DA L +M+ +I P+V+T+N L+ + G L +A KL D+M + PD
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
FT+++ I+G C + + EA +F+ + + C + TYN LING CK R+ +LF
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
+ +G + + VT +T+IH + D A + M + P+ +T+ TLL G +N K
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 555 KSKVVVLLHKMAAEKL 570
K +V+ + K+
Sbjct: 486 LEKAMVVFEYLQRSKM 501
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 215/441 (48%), Gaps = 41/441 (9%)
Query: 200 RNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
RN L ++KL ++ + FG + K P + +N ++ + K D L +M+ I
Sbjct: 58 RNGLHSMKL-DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
+ N+ TYN LI FC A L +MM G +P +VT ++++N C ++
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
L++ M++ G PDT+T+ +L+ G L + S A L MV +GC+ ++ +Y +++N C
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 376 KDQKVE-------------------------DAVCLYR----------EMLSERIRPSVI 400
K ++ D++C YR EM ++ +RP+VI
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
TY++L+S L DA +L+ M + P+ TF ID K G ++EA +++ +
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
+ I TY+ LING C RL A +F + K P+VVT +T+I+ CK ++
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSK 580
D+ +L +M + V + VT+ TL+ GF Q ++ +M ++ V ++ +
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPNIMTYNT 475
Query: 581 VVDLLSKDKKYRECLNQFRHL 601
++D L K+ K + + F +L
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYL 496
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 1/235 (0%)
Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
Y ++ K++DA+ L+ M+ R PS+ +N LLS + ++ + L +KMQ
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
+ + +T+ I+ C+ + A+ + + E I T + L+NG C R+
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
A L ++ G PD +T +T+IH L + +A L+ M + C P+ VT+ ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
G + LL+KM A K + +++ + S V+D L K + + LN F +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 293/504 (58%), Gaps = 4/504 (0%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
++A+ F M+K +P P + F+ LL+ +AK ++D V+SL +++ + G+ +L+ ++
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
IN C+ S A +LG++++ + P+ VT N L+NG C RI EA L ++
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
P+ VTF TL++GL + A+ L E MV + C+PD+VTY ++I+GLCK G D
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG---CQPDLVTYGAVINGLCKRGEPDL 233
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
A LL +M+ I +V+ YN++I G C +A LF +M G++PDV T+N +I+
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGCR 361
C G+ +RLL M+++ +NPD V +N+L+D F G++ A +L+ MV SK C
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
DV +YN LI CK ++VE+ + ++REM + + +TY TL+ G FQ + +A +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
+M + V PD T+ +DGLC NG V A+ VF+ ++ +L I TY +I LCK
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
G+++ LF L KG P+VVT +TM+ C++G ++A+ L ++M+ +P+ T
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
+ TL+R +++ ++ L+ +M
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEM 557
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 199/377 (52%), Gaps = 2/377 (0%)
Query: 62 SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
++EAV + M+ P + ++ ++ L K + D ++L ++ + D+ + N
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
+I+ LCK AF + ++ P+ T+N LI+ LC GR +A+RL +
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
+P++V FN LI+ + + A KL++EMV C PDVV YN++I G CK V+
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS--KHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
+ E+ +M R + N +TY +LI GF D A+ +F +M+ +GV PD++T+N ++
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
+ C +G ++ + E M +R + D VTY ++++ C G++ +LF S+ KG +
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
+V +Y +++ C+ E+A L+ EM + P+ TYNTL+ + G+ + +L
Sbjct: 494 PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAEL 553
Query: 422 IDKMQLNDVVPDSFTFA 438
I +M+ D+ TF
Sbjct: 554 IKEMRSCGFAGDASTFG 570
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 206/416 (49%), Gaps = 5/416 (1%)
Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
P++V F+ L++ + + + + L E+M N G ++ TY+ I+ C+ + A
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQN-LG--ISHNLYTYSIFINYFCRRSQLSLA 129
Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
+L +M P+++T NSL+ GFC + EA L +M++ G QPD VTF +++
Sbjct: 130 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 189
Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
+ K + L+E M+ +G PD VTY ++++G C G A L M D
Sbjct: 190 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 249
Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
V YN +I+ CK + ++DA L+ +M ++ I+P V TYN L+S L G DA +L+
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCELRIETYNCLINGLCKM 482
M ++ PD F ID K G ++EA +++ + +++ C + YN LI G CK
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
R++ ++F + +G + + VT +T+IH + D A + M + P +T+
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
LL G N +V+ M + + D+ + +++ L K K + + F
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKL-DIVTYTTMIEALCKAGKVEDGWDLF 484
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 162/325 (49%)
Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
+A LF +M+ + P +V F+ +++ K K D V L E M G++ + TY+ +
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
+ FC ++S A + M+ G + + N L+N C ++ +AV L +M+ +
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
P +T+ TL+ GLFQ +A+ L+++M + PD T+ I+GLCK G A+ +
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
+ K E + YN +I+GLCK + A LF++++ KG PDV T + +I LC
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
G+ A+ LL DM KN P V F L+ FV+ K + L +M K D+
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 577 LSSKVVDLLSKDKKYRECLNQFRHL 601
+ ++ K K+ E + FR +
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREM 382
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 1/289 (0%)
Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
+D K+D L M++ P V ++ L+ + + L M + G H++Y
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
+Y+I IN C+ ++ A+ + +M+ PS++T N+LL+G + +A+ L+D+M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
PD+ TF T + GL ++ EAV + + + C+ + TY +INGLCK G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
A L ++++ DVV +T+I LCK MD A DL ME K P T+ L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
+ + S LL M EK + DL + ++D K+ K E
Sbjct: 292 ISCLCNYGRWSDASRLLSDM-LEKNINPDLVFFNALIDAFVKEGKLVEA 339
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 266/482 (55%), Gaps = 41/482 (8%)
Query: 56 KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
K ++ E + F MI+ +P P + F+ +L+ +AK+K YD V+SLF + G+ D
Sbjct: 44 KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD 103
Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
L+ N++INC LC R + A +
Sbjct: 104 LYSYNIVINC-----------------------------------LCRCSRFVIALSVVG 128
Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
K+ F +P+VVT ++LING C+ A+ L +M E G +PDVV YN+IIDG C
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM-EEMGF--RPDVVIYNTIIDGSC 185
Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
K G V+ A EL +M+ + + +TYNSL+ G CC W +A L +M+ + P+V+
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
TF A+I+ K+GK + +L E M +R V+PD TYNSL++G C+ GR+ A+++ M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
V+KGC DV +YN LIN CK ++V++ L+REM + ITYNT++ G FQ G
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
A ++ +M D P+ T++ + GLC N V +A+ +F+ ++ + EL I TYN +
Sbjct: 366 DAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 476 INGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNC 535
I+G+CK+G ++ A LF L KG PDVV+ +TMI C++ Q DK++ L M+
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Query: 536 VP 537
+P
Sbjct: 483 LP 484
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 230/431 (53%), Gaps = 6/431 (1%)
Query: 141 RILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTR 200
++++S P+ V F+ +++ + LF + V ++ ++N +IN LCR
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 201 NTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVI 260
++AL + +M+ +FG +PDVVT +S+I+G C+ V A +L+ +M++ P+V+
Sbjct: 119 RFVIALSVVGKMM-KFGY--EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 261 TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELM 320
YN++I G C + +A LF M +GV+ D VT+N+++ C G+ RL+ M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 321 IQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV 380
+ R + P+ +T+ +++D F G+ S A +L+ M + DV++YN LIN C +V
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 381 EDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATY 440
++A + M+++ P V+TYNTL++G + + + KL +M +V D+ T+ T
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 441 IDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGP 500
I G + G A ++F + + I TY+ L+ GLC R++ A LF +Q
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 501 IPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVV 560
D+ T + +IH +CK G ++ A DL + K P V++ T++ GF + + K +
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472
Query: 561 LLHKMAAEKLV 571
L KM + L+
Sbjct: 473 LYRKMQEDGLL 483
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 212/423 (50%), Gaps = 10/423 (2%)
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDG 238
+P +V F + G RT +T + EE ++ F + + P +V ++ ++ + K
Sbjct: 26 NPVIVPFISRFWG--RTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSK 83
Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
D L M+ I ++ +YN +I C + A + +MM G +PDVVT +
Sbjct: 84 NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVS 143
Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
++IN C+ ++ L+ M + G PD V YN+++DG C +G ++ A ELF M
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203
Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
G R D +YN L+ C + DA L R+M+ I P+VIT+ ++ + G +A
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
+KL ++M V PD FT+ + I+GLC +G V EA Q+ + C + TYN LING
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
CK R+ KLF + +G + D +T +T+I + G+ D A ++ M+++ P+
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PN 380
Query: 539 EVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
T+ LL G N + K +VL M ++ + D++ + V+ + K + + F
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL-DITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 599 RHL 601
R L
Sbjct: 440 RSL 442
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 270/490 (55%), Gaps = 41/490 (8%)
Query: 59 NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
+I N+A+ F M+K +P P + F LL+ + K K+YD V+SL K++ G+ DL+
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY- 121
Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
TFN +IN C ++ A + K+
Sbjct: 122 ----------------------------------TFNIVINCFCCCFQVSLALSILGKML 147
Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
+P+ VT +L+NG CR A+ L ++MV E G KPD+V YN+IID LCK
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-EIGY--KPDIVAYNAIIDSLCKTK 204
Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
V+ A + +++ + I PNV+TY +L+ G C W +A L +M+ + P+V+T++
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
A+++ K+GK+ + L E M++ ++PD VTY+SL++G CL RI A ++F MVSK
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
GC DV SYN LIN CK ++VED + L+REM + + +TYNTL+ G FQ G++ A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLING 478
+ +M + PD +T+ + GLC NG + +A+ +F+ ++ + +L I TY +I G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 479 LCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPS 538
+CK G+++ A LF L KG PD+VT +TM+ LC +G + + L M+ + + +
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Query: 539 EVTFCTLLRG 548
+ CTL G
Sbjct: 505 D---CTLSDG 511
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 227/436 (52%), Gaps = 3/436 (0%)
Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
P+ V FN L++ + + L KK+ V ++ TFN +IN C +AL +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
+M+ + G +PD VT S+++G C+ V A L+ +M + P+++ YN++I
Sbjct: 143 LGKML-KLGY--EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
C +A F E+ G++P+VVT+ A++N C + RLL MI++ + P+
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
+TY++L+D F G++ A+ELF MV D+ +Y+ LIN C ++++A ++
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
M+S+ V++YNTL++G + + D +KL +M +V ++ T+ T I G + G
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
V +A + F + I TYN L+ GLC G L+ A +F +Q + D+VT +
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
T+I +CK G++++A L + K P VT+ T++ G +V L KM E
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Query: 569 KLVVSDLSLSSKVVDL 584
L+ +D +LS + L
Sbjct: 500 GLMKNDCTLSDGDITL 515
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 200/394 (50%), Gaps = 4/394 (1%)
Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
A+ LF +MV P +V +N ++ + K D L +M+ I ++ T+N
Sbjct: 69 AIDLFSDMVKSRPF---PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
+I FCC A + +M+ G +PD VT +++N C+ ++ L++ M++ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
PD V YN+++D C R++ A + F + KG R +V +Y L+N C + DA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
L +M+ ++I P+VITY+ LL + G + +A +L ++M + PD T+++ I+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
C + + EA Q+F + + C + +YN LING CK R++ KLF + +G + +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
VT +T+I + G +DKA + M+ P T+ LL G N + K +V+
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQF 598
M ++ + D+ + V+ + K K E + F
Sbjct: 426 MQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 139/296 (46%), Gaps = 1/296 (0%)
Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
+D K++ L M++ P V +N L+ + + L M G R+D+Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
++NI+IN C +V A+ + +ML P +T +L++G + + DA+ L+DKM
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
PD + ID LCK V +A F+ I + TY L+NGLC R
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
A +L + K P+V+T S ++ K G++ +A +L +M + P VT+ +L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
+ G +++ + + M + K ++D+ + +++ K K+ + + FR +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVS-KGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 299 bits (766), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 285/532 (53%), Gaps = 26/532 (4%)
Query: 83 SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
SF IL+ + +S F +L G PD+ N L++ LC S A + G +
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 143 LRSCF---------------TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
+ + F TP +TFN LINGLC EGR++EAA L K+ +VV
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
T+ T++NG+C+ +T AL L +M KPDVV Y++IID LCKDG A+ L
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETH---IKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
+M ++ I PNV TYN +I GFC W +A+ L +M++ + PDV+TFNA+I+ + K+
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
GK+ + +L + M+ R + PDTVTYNS++ GFC R A+ +F M S DV ++
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTF 435
Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
N +I+ C+ ++V++ + L RE+ + + TYNTL+ G +V NL A L +M
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
+ V PD+ T + G C+N + EA+++F+ I+ K +L YN +I+G+CK ++
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
A LF L G PDV T + MI C + + AN L M+ P T+ TL+R
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSK---DKKYRECLN 596
G ++ + K + L+ +M + ++ V DL++ DK + + L+
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKSFSDMLS 666
Score = 232 bits (591), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 141/465 (30%), Positives = 250/465 (53%), Gaps = 9/465 (1%)
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
EAV FD M+++ +P + +F L+ L + +L ++ GL D+ ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
N +CKMG T A +L ++ + P+ V ++ +I+ LC +G +A LF ++
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
PNV T+N +I+G C A +L +M+ PDV+T+N++I K+G + +A
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE---INPDVLTFNALISASVKEGKLFEA 385
Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
++L +M R I P+ +TYNS+I GFC + + +AK +F D PDVVTFN +I+
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDV 441
Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
C+ ++D+ +LL + +RG+ +T TYN+L+ GFC V ++ A++LF M+S G D
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
+ NIL+ C+++K+E+A+ L+ + +I + YN ++ G+ + + +A L
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
+ ++ V PD T+ I G C + +A +F +++ E TYN LI G K G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA-NDLL 527
+ + +L ++ G D T M+ L +G++DK+ +D+L
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSFSDML 665
Score = 228 bits (582), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 168/552 (30%), Positives = 256/552 (46%), Gaps = 90/552 (16%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
++A+ FFD M++ +P T + NK V+ +F R+N PD+
Sbjct: 88 DDAIDFFDYMVRSRP---------FYTAVDCNK----VIGVFVRMNR----PDV-----A 125
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I+ KM I RI N +FN LI C ++ + F KL
Sbjct: 126 ISLYRKMEIR--------RI-----PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF 172
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVN--------------EFGAICKPDVVTYN 228
P+VVTFNTL++GLC AL LF MV E G P V+T+N
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIG--LTPVVITFN 230
Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN 288
++I+GLC +G V +A L+ +M + ++ +V+TY +++ G C + D K A L +M +
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 289 GVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRA 348
++PDVV ++A+I+ CKDG L M+++G+ P+ TYN ++DGFC GR S A
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
+ L M+ + DV ++N LI+A+ K+ K+ +A L EML I P +TYN+++ G
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
+ DA + D M PD TF T ID C+ V E +Q+ + I
Sbjct: 411 FCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTM------------------ 510
TYN LI+G C++ L A LF + G PD +TC+ +
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 511 -----------------IHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
IH +CK ++D+A DL + P T+ ++ GF +
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 554 KKSKVVVLLHKM 565
S VL HKM
Sbjct: 587 AISDANVLFHKM 598
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 206/400 (51%), Gaps = 9/400 (2%)
Query: 43 DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
D + +N K G+ S A+ M + P + ++ ++ L K+ +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKS--ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
LF + G+ P++F N +I+ C G S A +L ++ P+ +TFN LI+
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
EG++ EA +L ++ P+ VT+N++I G C+ F++ + F + P
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR-------FDDAKHMFDLMASP 430
Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
DVVT+N+IID C+ VD+ +LL ++ R + N TYN+LI GFC VD+ A+ LF
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
EM+ +GV PD +T N ++ C++ K+++ L E++ ++ DTV YN ++ G C
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
++ A +LF S+ G DV +YN++I+ C + DA L+ +M P TY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 403 NTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
NTL+ G + G + +++LI +M+ N D+FT D
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 20/354 (5%)
Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
N +I F ++ A L+ +M + ++ +FN +I C K+ + +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV---------------YSY 367
G PD VT+N+L+ G CL RIS A LF MV G V ++
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
N LIN C + +V +A L +M+ + + V+TY T+++G+ ++G+ AL L+ KM+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
+ PD ++ ID LCK+G +A +F + + TYNC+I+G C GR
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
A +L + + PDV+T + +I KEG++ +A L +M + P VT+ +++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
GF ++N+ + MA+ +V + ++D+ + K+ E + R +
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTFN-----TIIDVYCRAKRVDEGMQLLREI 458
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 292 bits (747), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 161/508 (31%), Positives = 267/508 (52%), Gaps = 41/508 (8%)
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
E F + M+ P + T L+ + + + + L +G PD+ N++I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
+ CK G + A VL R+ +P+ VT+N ++ LC G++ +A + ++ C
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
P+V+T+ LI CR A+KL +EM + C PDVVTYN +++G+CK+G +D+A
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRG---CTPDVVTYNVLVNGICKEGRLDEA 293
Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
+ L M PNVIT+N ++ C W +A+ L +M+ G P VVTFN +IN+
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
C+ G + + +LE M Q G P++++YN L+ GFC ++ RA E MVS+GC D
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
+ +YN ++ A CKD KVEDAV + ++ S+ P +ITYNT++ GL + G G A+KL+D
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
+M+ D+ PD+ T+++ + GL + G V EA++ F
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE------------------------ 509
Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
F R+ G P+ VT ++++ LCK Q D+A D L+ M + C P+E ++
Sbjct: 510 --------FERM---GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYT 558
Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
L+ G + + LL+++ + L+
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 226/420 (53%), Gaps = 6/420 (1%)
Query: 145 SCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLV 204
S F V N + + G + E + + + P+++ TLI G CR T
Sbjct: 96 SSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRK 155
Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
A K+ E ++ GA+ PDV+TYN +I G CK G ++ A +L +M +++P+V+TYN+
Sbjct: 156 AAKILE-ILEGSGAV--PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNT 209
Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
++ C K+A + M+ PDV+T+ +I C+D + +LL+ M RG
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
PD VTYN L++G C GR+ A + M S GC+ +V ++NI++ + C + DA
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
L +ML + PSV+T+N L++ L + G LG A+ +++KM + P+S ++ + G
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
CK + A++ + + + C I TYN ++ LCK G+++ A ++ ++L KG P +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
+T +T+I L K G+ KA LL +M AK+ P +T+ +L+ G + K + + H+
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 214/414 (51%), Gaps = 7/414 (1%)
Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
V N + + RT K E MV PD++ ++I G C+ G KA ++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNV---PDIIPCTTLIRGFCRLGKTRKAAKI 159
Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
L ++ P+VITYN +I G+C + A + M V PDVVT+N ++ C
Sbjct: 160 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCD 216
Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
GK+ + +L+ M+QR PD +TY L++ C + A +L M +GC DV +
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
YN+L+N CK+ ++++A+ +M S +P+VIT+N +L + G DA KL+ M
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
P TF I+ LC+ G + A+ + + + C+ +YN L++G CK ++
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
A + R+ +G PD+VT +TM+ LCK+G+++ A ++L + +K C P +T+ T++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRH 600
G + K K + LL +M A+ L ++ SS +V LS++ K E + F
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS-LVGGLSREGKVDEAIKFFHE 509
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 207/407 (50%), Gaps = 8/407 (1%)
Query: 56 KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
K+G I N A+ D +M SP + ++ +L L + + + + R+ +PD
Sbjct: 184 KAGEI--NNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD 238
Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
+ +LI C+ A +L + TP+ VT+N L+NG+C EGR+ EA +
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
+ C PNV+T N ++ +C T + A KL +M+ + + P VVT+N +I+ LC
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS---PSVVTFNILINFLC 355
Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
+ G + +A ++L +M PN ++YN L+ GFC A M+ G PD+V
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
T+N M+ CKDGK++ +L + +G +P +TYN+++DG G+ +A +L M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
+K + D +Y+ L+ ++ KV++A+ + E IRP+ +T+N+++ GL +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN 462
A+ + M P+ ++ I+GL G EA+++ + N
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 31/264 (11%)
Query: 330 VTYNSLMDGFCLVGRI----SRARELFVSMVSKGCRHDVYSYN-------ILINA----- 373
V+ +S +GFCL+ + R +L VS + G +L++A
Sbjct: 5 VSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVE 64
Query: 374 ----NCKDQKVEDAVCLYREMLSERIRPSV--------ITYNTLLSGLFQVGNLGDALKL 421
N + QK E Y SV + N L + + G L + K
Sbjct: 65 SSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKF 124
Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
++ M + VPD T I G C+ G +A ++ + + + TYN +I+G CK
Sbjct: 125 LENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK 184
Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
G + A + R+ PDVVT +T++ LC G++ +A ++L M ++C P +T
Sbjct: 185 AGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 542 FCTLLRGFVQNNKKSKVVVLLHKM 565
+ L+ +++ + LL +M
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEM 265
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/472 (35%), Positives = 267/472 (56%), Gaps = 6/472 (1%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
NEA+ F M++ +P P + FT LL ++AK K++D V++L L G+ DL+ NLL
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
+NC C+ A LG++++ F P+ VTF LING C R+ EA + ++
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
P+VV + T+I+ LC+ + AL LF++M N +G +PDVV Y S+++GLC G
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-YG--IRPDVVMYTSLVNGLCNSGRWRD 230
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
A LL M R I P+VIT+N+LI F + +A+ L+ EM+ + P++ T+ ++IN
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
C +G +D+ ++ LM +G PD V Y SL++GFC ++ A ++F M KG
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
+ +Y LI + K A ++ M+S + P++ TYN LL L G + AL +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 423 DKMQ---LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
+ MQ ++ V P+ +T+ + GLC NG + +A+ VF+ +R + ++ I TY +I G+
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDME 531
CK G++K A LF L KG P+VVT +TMI L +EG +A+ L M+
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 231/458 (50%), Gaps = 12/458 (2%)
Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
P+ + F L+N + + L L + ++ T N L+N C++ +A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
+M+ + G +PD+VT+ S+I+G C +++A ++ QM + I P+V+ Y ++I
Sbjct: 130 LGKMM-KLGF--EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186
Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
C A LF +M + G++PDVV + +++N C G+ + LL M +R + PD
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
+T+N+L+D F G+ A EL+ M+ ++++Y LIN C + V++A ++
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
M ++ P V+ Y +L++G + + DA+K+ +M + ++ T+ T I G + G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK---GPIPDVV 505
A +VF + + I TYN L++ LC G++K A +F +Q + G P++
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
T + ++H LC G+++KA + DM + +T+ +++G + K V L +
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486
Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLLF 603
++ + + ++ ++ + L +RE L H+LF
Sbjct: 487 PSKGVKPNVVTYTTMISGL------FREGLKHEAHVLF 518
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 179/366 (48%), Gaps = 3/366 (0%)
Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
AL LF MV P ++ + +++ + K D L ++ ++ ++ T N
Sbjct: 56 ALDLFTHMVESRPL---PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
L+ FC A +MM G +PD+VTF ++IN C +M++ ++ M++ G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
+ PD V Y +++D C G ++ A LF M + G R DV Y L+N C + DA
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
L R M +I+P VIT+N L+ + G DA +L ++M + P+ FT+ + I+G
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
C G V EA Q+F + C + Y LING CK ++ A K+F+ + KG +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
+T +T+I + G+ + A ++ M ++ P+ T+ LL N K K +++
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 565 MAAEKL 570
M ++
Sbjct: 413 MQKREM 418
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 157/306 (51%)
Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
+ EA LF M+++ P ++ F ++N K K D V L + + GV+ D T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
LM+ FC + A M+ G D+ ++ LIN C ++E+A+ + +M+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
I+P V+ Y T++ L + G++ AL L D+M+ + PD + + ++GLC +G +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
+ + + K + + T+N LI+ K G+ A +L++ + P++ T +++I+
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
C EG +D+A + ME K C P V + +L+ GF + K + + ++M+ + L +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 574 DLSLSS 579
++ ++
Sbjct: 352 TITYTT 357
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 56 KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
K G E +Y + MI+M +P + ++T L+ D +F + + G FPD
Sbjct: 259 KEGKFLDAEELY--NEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
+ LIN CK A + + + T NT+T+ LI G G+ A +F
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
+ PN+ T+N L++ LC AL +FE+M P++ TYN ++ GLC
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
+G ++KA + M+ R ++ +ITY +I G C K A LF + GV+P+VV
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
T+ MI+ ++G + + L M + GV+
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 258/474 (54%), Gaps = 38/474 (8%)
Query: 54 RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
R +I ++A+ F M + +P P + F+ LL+ +AK ++D V+S +++ G+
Sbjct: 51 RTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGIS 110
Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
+L+ N+LINC C+ S A +LG++++ + P+ VT N L+NG C RI +A L
Sbjct: 111 HNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVAL 170
Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
++ P+ VTF TLI+GL A+ L + MV C+PD+VTY ++++G
Sbjct: 171 VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG---CQPDLVTYGAVVNG 227
Query: 234 LCKDGFVDKAKELL-----------------------------------LQMKDRNINPN 258
LCK G D A LL +M+++ + PN
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
VITY+SLI C W +A L +M++ + P++VTF+A+I+ K GK+ K +L E
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
MI+R ++P+ TY+SL++GFC++ R+ A+++ M+ K C +V +YN LIN CK +
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407
Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
+V+ + L+REM + + +TY TL+ G FQ + +A + +M V P+ T+
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 467
Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLF 492
+DGLCKNG + +A+ VF+ ++ E I TYN +I G+CK G+ K F
Sbjct: 468 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 202/368 (54%), Gaps = 3/368 (0%)
Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
P+++ F+ L++ + + + + E+M E I ++ TYN +I+ C+ + A
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKM--EILGISH-NLYTYNILINCFCRCSRLSLA 132
Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
LL +M P+++T NSL+ GFC + +A L +M++ G +PD VTF +I+
Sbjct: 133 LALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG 192
Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
K + L++ M+QRG PD VTY ++++G C G A L M + +
Sbjct: 193 LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252
Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
V Y+ +I++ CK + +DA+ L+ EM ++ +RP+VITY++L+S L G DA +L+
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
M + P+ TF+ ID K G +++A ++++ + + I TY+ LING C +
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
RL A ++ + K +P+VVT +T+I+ CK ++DK +L +M + V + VT+
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYT 432
Query: 544 TLLRGFVQ 551
TL+ GF Q
Sbjct: 433 TLIHGFFQ 440
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 163/294 (55%), Gaps = 3/294 (1%)
Query: 65 AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
A+ + M K + ++ ++ L K + D ++LF + + G+ P++ + LI+
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
CLC G S A +L ++ PN VTF+ LI+ +G++++A +L++++ + DP
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
N+ T+++LING C A ++ E M+ + C P+VVTYN++I+G CK VDK
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRK---DCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
EL +M R + N +TY +LI GF D A+ +F +M+ GV P+++T+N +++
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
CK+GK+ K + E + + + PD TYN +++G C G+ FV+ K
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVASALK 527
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 146/292 (50%)
Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
+ +A LF M + P ++ F+ +++ K K D V E M G++ + TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
L++ FC R+S A L M+ G D+ + N L+N C ++ DAV L +M+
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
+P +T+ TL+ GLF +A+ LID+M PD T+ ++GLCK G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
+ + + K E + Y+ +I+ LCK A LF +++KG P+V+T S++I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
LC G+ A+ LL DM + P+ VTF L+ FV+ K K L +M
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
Y Y ++ D +++DA+ L+ M R PS+I ++ LLS + ++ + +K
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
M++ + + +T+ I+ C+ + A+ + + E I T N L+NG C R
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
+ A L ++ G PD VT +T+IH L + +A L+ M + C P VT+
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 545 LLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
++ G + + LL+KM A K + +++ + S V+D L K + + LN F +
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/489 (32%), Positives = 263/489 (53%), Gaps = 38/489 (7%)
Query: 54 RHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLF 113
R+ N+ N+A+ F M+ +P P + FT LL+++AK +YD V+SLF+++ G+
Sbjct: 56 RNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIP 115
Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
P L N++++C+C A LG++++ F
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGF-------------------------- 149
Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
+P++VTF +L+NG C A+ LF++++ G KP+VVTY ++I
Sbjct: 150 ---------EPDLVTFTSLLNGYCHWNRIEDAIALFDQIL---GMGFKPNVVTYTTLIRC 197
Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
LCK+ ++ A EL QM PNV+TYN+L+ G C + W +A L +MM ++P+
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257
Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
V+TF A+I+ K GK+ + L +MIQ V PD TY SL++G C+ G + AR++F
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
M GC + Y LI+ CK ++VED + ++ EM + + + ITY L+ G VG
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
A ++ ++M PD T+ +DGLC NG V +A+ +F+ +R + ++ I TY
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
+I G+CK+G+++ A LF L KG P+V+T +TMI C+ G + +A+ L M+
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 534 NCVPSEVTF 542
+P+E +
Sbjct: 498 GFLPNESVY 506
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 224/440 (50%), Gaps = 3/440 (0%)
Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
A + R++ S P+ + F L++ + R LF+++ + P + T N +++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
+C + A +M+ + G +PD+VT+ S+++G C ++ A L Q+
Sbjct: 127 CVCLSSQPCRASCFLGKMM-KLGF--EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
PNV+TY +LI C A LF +M NG +P+VVT+NA++ C+ G+
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
LL M++R + P+ +T+ +L+D F VG++ A+EL+ M+ DV++Y LIN
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
C +++A ++ M P+ + Y TL+ G + + D +K+ +M VV ++
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
T+ I G C G A +VF + + + I TYN L++GLC G+++ A +F
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
++ + ++VT + +I +CK G+++ A DL + +K P+ +T+ T++ GF +
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 555 KSKVVVLLHKMAAEKLVVSD 574
+ L KM + + ++
Sbjct: 484 IHEADSLFKKMKEDGFLPNE 503
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 165/326 (50%), Gaps = 2/326 (0%)
Query: 274 DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
+ +A LF M+ + P ++ F +++ K + D V L E M G+ P T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
+M CL + RA M+ G D+ ++ L+N C ++EDA+ L+ ++L
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
+P+V+TY TL+ L + +L A++L ++M N P+ T+ + GLC+ G +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
+ + + + E + T+ LI+ K+G+L A +L++ + PDV T ++I+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
LC G +D+A + ME C P+EV + TL+ GF ++ + + + ++M+ + +V +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 574 DLSLSSKVVD--LLSKDKKYRECLNQ 597
++ + + L+ + +E NQ
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQ 388
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 279 bits (714), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 266/504 (52%), Gaps = 40/504 (7%)
Query: 36 LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNK 95
S + +G+ + L + + + + ++F M++ +P P + F+ LL+ ++K K
Sbjct: 38 FSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFH--MVQCRPLPSIADFSRLLSAISKMK 95
Query: 96 QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
+YD V+ L++++ G+ +L N+L+NC C+ S A LG
Sbjct: 96 KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLG--------------- 140
Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
K+ +P++VTF +L+NG CR AL +F++MV
Sbjct: 141 --------------------KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV-- 178
Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
G KP+VV YN+IIDGLCK VD A +LL +M+ I P+V+TYNSLI G C W
Sbjct: 179 -GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
+A + M + PDV TFNA+I+ K+G++ + E MI+R ++PD VTY+ L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 336 MDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERI 395
+ G C+ R+ A E+F MVSKGC DV +Y+ILIN CK +KVE + L+ EM +
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQ 455
+ +TY L+ G + G L A ++ +M V P+ T+ + GLC NG + +A+
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 456 VFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLC 515
+ ++ + I TYN +I G+CK G + A ++ L +G +PD+ T +TM+ L
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 516 KEGQMDKANDLLLDMEAKNCVPSE 539
K+G +A+ L M+ +P+E
Sbjct: 478 KKGLRREADALFRKMKEDGILPNE 501
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 217/423 (51%), Gaps = 3/423 (0%)
Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
P+ F+ L++ + + L++++ + N+ T N L+N CR +AL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
+M+ + G +P +VT+ S+++G C+ V A + QM PNV+ YN++I G
Sbjct: 139 LGKMI-KLGH--EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDG 195
Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
C A L M +G+ PDVVT+N++I+ C G+ R++ M +R + PD
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
T+N+L+D GR+S A E + M+ + D+ +Y++LI C ++++A ++
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
M+S+ P V+TY+ L++G + + +KL +M VV ++ T+ I G C+ G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
+ A ++F+ + C I TYN L++GLC G+++ A + +Q G D+VT +
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
+I +CK G++ A D+ + + +P T+ T++ G + + + L KM +
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Query: 569 KLV 571
++
Sbjct: 496 GIL 498
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 167/327 (51%)
Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
+D + +L M P++ ++ L+ + + L+ +M G+ ++ T N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
++N C+ ++ L MI+ G P VT+ SL++GFC R+ A +F MV G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
+ +V YN +I+ CK ++V++A+ L M + I P V+TYN+L+SGL G DA
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 420 KLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGL 479
+++ M ++ PD FTF ID K G V EA + ++ + + I TY+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
C RL A ++F + KG PDVVT S +I+ CK +++ L +M + V +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMA 566
VT+ L++G+ + K + + +M
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMV 388
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 160/326 (49%), Gaps = 20/326 (6%)
Query: 266 ICGFCCVDDWKEAKCLFIEMMDNGVQ--------------------PDVVTFNAMINYNC 305
ICGFC + EM+ NG++ P + F+ +++
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
K K D V L E M G+ + T N L++ FC ++S A M+ G +
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
++ L+N C+ +V DA+ ++ +M+ +P+V+ YNT++ GL + + +AL L+++M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRL 485
+ + + PD T+ + I GLC +G +A ++ + + + T+N LI+ K GR+
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 486 KTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
A + + + + PD+VT S +I+ LC ++D+A ++ M +K C P VT+ L
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 546 LRGFVQNNKKSKVVVLLHKMAAEKLV 571
+ G+ ++ K + L +M+ +V
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVV 358
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/586 (29%), Positives = 293/586 (50%), Gaps = 42/586 (7%)
Query: 43 DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
D S +N K G+ S++A + M+ P + ++ ++ L K + D +
Sbjct: 195 DVVSYTTVINGFFKEGD--SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAME 252
Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
+ + NG+ PD N +++ C G A L ++ P+ VT++ L++ LC
Sbjct: 253 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC 312
Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGA---- 218
GR MEA ++F + P + T+ TL+ G T+ LV + +++ G
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPDH 371
Query: 219 ------ICK-----------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
IC P+ VTY ++I LCK G V+ A Q
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
M D ++P I YNSLI G C + W+ A+ L +EM+D G+ + + FN++I+ +CK+G+
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
+ + +L ELM++ GV P+ +TYN+L++G+CL G++ A +L MVS G + + +Y+
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
LIN CK ++EDA+ L++EM S + P +ITYN +L GLFQ A +L ++ +
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE--TYNCLINGLCKMGRLKT 487
+ T+ + GLCKN +A+Q+FQ + C +L++E T+N +I+ L K+GR
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNL--CLMDLKLEARTFNIMIDALLKVGRNDE 669
Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
A LF G +P+ T M + +G +++ + L L ME C ++R
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 729
Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
+Q + ++ L M EK + S +S +DLLS KY+E
Sbjct: 730 ELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLS-GGKYQE 773
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 171/613 (27%), Positives = 284/613 (46%), Gaps = 76/613 (12%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNG---LFPDLFVL 119
+A + FD +++ + L +A++ VS + R+ G + PDL
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTY 90
Query: 120 NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL-FKKLN 178
+LI C C+ G F LG +++ F + + F L+ GLCA+ R +A + +++
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
C PNV ++N L+ GLC + AL+L M ++ G PDVV+Y ++I+G K+G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLIC------------------------------- 267
DKA +M DR I P+V+TYNS+I
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 268 ----GFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
G+C KEA +M +GV+PDVVT++ +++Y CK+G+ + ++ + M +R
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKV--- 380
G+ P+ TY +L+ G+ G + L MV G D Y ++ILI A K KV
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 381 --------------------------------EDAVCLYREMLSERIRPSVITYNTLLSG 408
EDA+ + +M+ E + P I YN+L+ G
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
L A +LI +M + ++ F + ID CK G V+E+ ++F+ + +
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510
Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
+ TYN LING C G++ A KL + G P+ VT ST+I+ CK +M+ A L
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
+ME+ P +T+ +L+G Q +++ L+ E +LS + ++ L K+
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQ-TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Query: 589 KKYRECLNQFRHL 601
K + L F++L
Sbjct: 630 KLTDDALQMFQNL 642
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 273 bits (697), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 284/543 (52%), Gaps = 54/543 (9%)
Query: 13 ASKAGYRCNFWCSFGRPPNPKTDLS--------SHHFKDGTSIAKFLNDRHKSGNITSNE 64
+S G+ + R NP+T LS HH+++ + N+ H I ++
Sbjct: 11 SSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRE-----RLRNELH---CIKFDD 62
Query: 65 AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
A F M++ +P P + FT +LT++AK ++D V+ L+ ++ + G+ DL+ +LI+
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
C C+ S A +LG++++ F P+
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPS---------------------------------- 148
Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
+VT +L+NG C+ A+ L + M + FG + P+VV YN++I+GLCK+ ++ A
Sbjct: 149 -IVTLGSLLNGFCQGNRFQEAVSLVDSM-DGFGFV--PNVVIYNTVINGLCKNRDLNNAL 204
Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYN 304
E+ M+ + I + +TYN+LI G W +A L +M+ + P+V+ F A+I+
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 305 CKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDV 364
K+G + + L + MI+R V P+ TYNSL++GFC+ G + A+ +F MVSKGC DV
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 365 YSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDK 424
+YN LI CK ++VED + L+ EM + + TYNTL+ G Q G L A K+ ++
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 425 MQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGR 484
M V PD T+ +D LC NG + +A+ + + ++ + ++ I TYN +I GLC+ +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 485 LKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCT 544
LK A LF L KG PD + TMI LC++G +A+ L M+ +PSE +
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Query: 545 LLR 547
LR
Sbjct: 505 TLR 507
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 220/440 (50%), Gaps = 3/440 (0%)
Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
AF + +L+S P+ V F ++ + + L+ K+ ++ +F LI+
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
CR +AL L +M+ + G +P +VT S+++G C+ +A L+ M
Sbjct: 123 CFCRCSRLSLALALLGKMM-KLGF--RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
PNV+ YN++I G C D A +F M G++ D VT+N +I+ G+
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
RLL M++R ++P+ + + +L+D F G + AR L+ M+ + +V++YN LIN
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
C + DA ++ M+S+ P V+TYNTL++G + + D +KL +M +V D+
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
FT+ T I G C+ G + A +VF + +C I TYN L++ LC G+++ A +
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
LQ D++T + +I LC+ ++ +A L + K P + + T++ G +
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 555 KSKVVVLLHKMAAEKLVVSD 574
+ + L +M + + S+
Sbjct: 480 QREADKLCRRMKEDGFMPSE 499
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 203/408 (49%), Gaps = 6/408 (1%)
Query: 198 RTRNTLVALKLFEEMVNEFGAICK----PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDR 253
R RN L +K F++ + F + + P +V + ++ + K D L +M++
Sbjct: 50 RLRNELHCIK-FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL 108
Query: 254 NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKV 313
I+ ++ ++ LI FC A L +MM G +P +VT +++N C+ + +
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168
Query: 314 NRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
L++ M G P+ V YN++++G C ++ A E+F M KG R D +YN LI+
Sbjct: 169 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
+ DA L R+M+ +I P+VI + L+ + GNL +A L +M VVP+
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
FT+ + I+G C +G + +A +F + + C + TYN LI G CK R++ KLF
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
+ ++G + D T +T+IH C+ G+++ A + M P VT+ LL N
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408
Query: 554 KKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
K K +V++ + ++ V D+ + ++ L + K +E FR L
Sbjct: 409 KIEKALVMVEDLQKSEMDV-DIITYNIIIQGLCRTDKLKEAWCLFRSL 455
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 259/484 (53%), Gaps = 40/484 (8%)
Query: 53 DRHKSG--NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN 110
+R +SG +I N+A+ F M + P P + F+ LL +AK +Y+ V+SLF+ L
Sbjct: 49 ERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEML 108
Query: 111 GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA 170
G+ DL+ LI+C C+ S A LG++++ F
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGF----------------------- 145
Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
+P++VTF +L+NG C A+ L +++V G +P+VV YN+I
Sbjct: 146 ------------EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV---GLGYEPNVVIYNTI 190
Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
ID LC+ G V+ A ++L MK I P+V+TYNSLI W + + +MM G+
Sbjct: 191 IDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGI 250
Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
PDV+TF+A+I+ K+G++ + + MIQR VNP+ VTYNSL++G C+ G + A++
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310
Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLF 410
+ +VSKG + +YN LIN CK ++V+D + + M + + TYNTL G
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370
Query: 411 QVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIE 470
Q G A K++ +M V PD +TF +DGLC +G + +A+ + ++ K + I
Sbjct: 371 QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII 430
Query: 471 TYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM 530
TYN +I GLCK +++ A LF L KG PDV+T TM+ L ++ +A++L M
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Query: 531 EAKN 534
+ ++
Sbjct: 491 QKED 494
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 213/418 (50%), Gaps = 4/418 (0%)
Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
P++V F+ L+ + + + LF + E I D+ ++ ++ID C+ + A
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHL--EMLGISH-DLYSFTTLIDCFCRCARLSLA 133
Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
L +M P+++T+ SL+ GFC V+ + EA L +++ G +P+VV +N +I+
Sbjct: 134 LSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDS 193
Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
C+ G+++ +L+ M + G+ PD VTYNSL+ G + + M+ G D
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253
Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
V +++ LI+ K+ ++ +A Y EM+ + P+++TYN+L++GL G L +A K+++
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
+ P++ T+ T I+G CK V + +++ + + TYN L G C+ G
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
+ A K+ R+ G PD+ T + ++ LC G++ KA L D++ V +T+
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433
Query: 544 TLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
+++G + +K L +A + + ++ + ++ L K + +RE +R +
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK-RLWREAHELYRKM 490
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 163/327 (49%)
Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
+ A L M + + P+++ ++ L+ ++ ++ LF + G+ D+ +F +
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
I+ C+ ++ L M++ G P VT+ SL++GFC V R A L +V G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
+V YN +I++ C+ +V A+ + + M IRP V+TYN+L++ LF G G + +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
++ M + PD TF+ ID K G +LEA + + + I TYN LINGLC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
G L A K+ + L KG P+ VT +T+I+ CK ++D +L M
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAA 567
T+ TL +G+ Q K S +L +M +
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 176/385 (45%), Gaps = 3/385 (0%)
Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
AL LF +M P +V ++ ++ + K + L ++ I+ ++ ++ +
Sbjct: 63 ALTLFCDMAESHPL---PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
LI FC A +MM G +P +VTF +++N C + + L++ ++ G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
P+ V YN+++D C G+++ A ++ M G R DV +YN LI +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
+ +M+ I P VIT++ L+ + G L +A K ++M V P+ T+ + I+GL
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
C +G + EA +V + + TYN LING CK R+ K+ + G D
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
T +T+ C+ G+ A +L M + P TF LL G + K K +V L
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDK 589
+ K VV ++ + + L DK
Sbjct: 420 LQKSKTVVGIITYNIIIKGLCKADK 444
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 96 QYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFN 155
++ + R+ S G+ PD++ N+L++ LC G A V L + +S +T+N
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433
Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
+I GLC ++ +A LF L + P+V+T+ T++ GL R R A +L+ +M E
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Query: 216 FG 217
G
Sbjct: 494 DG 495
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 87/233 (37%), Gaps = 37/233 (15%)
Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
L SGL + DAL L M + +P F+ + + K + +F+ +
Sbjct: 51 LRSGLHSI-KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLG 109
Query: 465 CELRIETYNCLINGLCKMGRLK-----------------------------------TAC 489
+ ++ LI+ C+ RL A
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
L ++ G P+VV +T+I LC++GQ++ A D+L M+ P VT+ +L+
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
+ +L M + D+ S ++D+ K+ + E Q+ ++
Sbjct: 230 FHSGTWGVSARILSDMMRMG-ISPDVITFSALIDVYGKEGQLLEAKKQYNEMI 281
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 160/509 (31%), Positives = 271/509 (53%), Gaps = 8/509 (1%)
Query: 41 FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
F+D T + K + +SGN E+++ + M++ +P + T L+ +
Sbjct: 87 FRD-TQMLKIFHRSCRSGNYI--ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA 143
Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
V + + L G PD+F N LIN CKM A VL R+ F+P+TVT+N +I
Sbjct: 144 VRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202
Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
LC+ G++ A ++ +L C P V+T+ LI ALKL +EM++
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG---L 259
Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
KPD+ TYN+II G+CK+G VD+A E++ ++ + P+VI+YN L+ W+E +
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
L +M P+VVT++ +I C+DGK+++ LL+LM ++G+ PD +Y+ L+ FC
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
GR+ A E +M+S GC D+ +YN ++ CK+ K + A+ ++ ++ P+
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
+YNT+ S L+ G+ AL +I +M N + PD T+ + I LC+ G V EA ++ +
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
R+C+ + TYN ++ G CK R++ A + + G P+ T + +I + G
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559
Query: 521 DKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
+A +L D+ + + SE +F L R F
Sbjct: 560 AEAMELANDLVRIDAI-SEYSFKRLHRTF 587
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 224/441 (50%), Gaps = 4/441 (0%)
Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
C+ G + +L ++R + P+ + LI G I +A R+ + L F P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 187 VTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKEL 246
+N LING C+ A ++ + M ++ + PD VTYN +I LC G +D A ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFS---PDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 247 LLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCK 306
L Q+ N P VITY LI EA L EM+ G++PD+ T+N +I CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 307 DGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYS 366
+G +D+ ++ + +G PD ++YN L+ G+ +L M S+ C +V +
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
Y+ILI C+D K+E+A+ L + M + + P +Y+ L++ + G L A++ ++ M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
+ +PD + T + LCKNG +A+++F + C +YN + + L G
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
A + + G PD +T ++MI LC+EG +D+A +LL+DM + PS VT+ +L
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 547 RGFVQNNKKSKVVVLLHKMAA 567
GF + ++ + +L M
Sbjct: 516 LGFCKAHRIEDAINVLESMVG 536
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 192/385 (49%), Gaps = 4/385 (1%)
Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
CR+ N + +L L E MV + PDV+ +I G + KA ++ ++ ++
Sbjct: 100 CRSGNYIESLHLLETMVRKG---YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQ 155
Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
P+V YN+LI GFC ++ +A + M PD VT+N MI C GK+D ++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
L ++ P +TY L++ L G + A +L M+S+G + D+++YN +I CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
+ V+ A + R + + P VI+YN LL L G + KL+ KM P+ T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
++ I LC++G + EA+ + + ++ +Y+ LI C+ GRL A + +
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
G +PD+V +T++ LCK G+ D+A ++ + C P+ ++ T+ + K
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKV 581
+ + ++ +M + + +++ +S +
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMI 480
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 263 bits (671), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 257/488 (52%), Gaps = 6/488 (1%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
+ A+ M K P + L+ L+K + + + L + + G PD N +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I LCK + A ++ R+L F P+ +T+ +L+NGLC GR+ A LF ++
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP---- 349
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
P +V FNTLI+G A + +MV +G + PDV TYNS+I G K+G V
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV--PDVCTYNSLIYGYWKEGLVGL 407
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
A E+L M+++ PNV +Y L+ GFC + EA + EM +G++P+ V FN +I+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
CK+ ++ + + M ++G PD T+NSL+ G C V I A L M+S+G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
+ +YN LINA + ++++A L EM+ + ITYN+L+ GL + G + A L
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
+KM + P + + I+GLC++G V EAV+ + + I T+N LINGLC+
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
GR++ +F +LQ +G PD VT +T++ WLCK G + A LL + VP+ T+
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 543 CTLLRGFV 550
LL+ +
Sbjct: 708 SILLQSII 715
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 266/519 (51%), Gaps = 8/519 (1%)
Query: 78 SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
P S+ ++L +L + ++F + S + P LF +++ C + A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
+L + + PN+V + LI+ L R+ EA +L +++ + C P+ TFN +I GLC
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
+ A K+ M+ A PD +TY +++GLCK G VD AK+L ++ P
Sbjct: 299 KFDRINEAAKMVNRMLIRGFA---PDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KP 351
Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMINYNCKDGKMDKVNRL 316
++ +N+LI GF +AK + +M+ + G+ PDV T+N++I K+G + +
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
L M +G P+ +Y L+DGFC +G+I A + M + G + + +N LI+A CK
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
+ ++ +AV ++REM + +P V T+N+L+SGL +V + AL L+ M VV ++ T
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
+ T I+ + G + EA ++ + L TYN LI GLC+ G + A LF ++
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
G P ++C+ +I+ LC+ G +++A + +M + P VTF +L+ G + +
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECL 595
+ + K+ AE + ++ ++ + L Y CL
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/461 (32%), Positives = 238/461 (51%), Gaps = 8/461 (1%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
NEA+ + M M P +F ++ L K + + + R+ G PD L
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA-ARLFKKLNVFA 181
+N LCK+G A + RI + P V FN LI+G GR+ +A A L + +
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
P+V T+N+LI G + +AL++ +M N+ CKP+V +Y ++DG CK G +D
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG---CKPNVYSYTILVDGFCKLGKID 441
Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
+A +L +M + PN + +N LI FC EA +F EM G +PDV TFN++I
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
+ C+ ++ LL MI GV +TVTYN+L++ F G I AR+L MV +G
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
D +YN LI C+ +V+ A L+ +ML + PS I+ N L++GL + G + +A++
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF 621
Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
+M L PD TF + I+GLC+ G + + + +F+ ++ T+N L++ LCK
Sbjct: 622 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
G + AC L G +P+ T S ++ + + +D+
Sbjct: 682 GGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 242/502 (48%), Gaps = 23/502 (4%)
Query: 84 FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC---KMGITSGA--FVV 138
+ +L+ L N ++ T+ L ++ G+ +F +L I+ + K G ++
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGI---VFKESLFISIMRDYDKAGFPGQTTRLML 170
Query: 139 LGRILRSC---FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLING 195
R + SC F V L++G C + AA +F + P + TF ++
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKA 226
Query: 196 LCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNI 255
C AL L +M C P+ V Y ++I L K V++A +LL +M
Sbjct: 227 FCAVNEIDSALSLLRDMTKHG---CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 256 NPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNR 315
P+ T+N +I G C D EA + M+ G PD +T+ ++N CK G++D
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV-SKGCRHDVYSYNILINAN 374
L R P+ V +N+L+ GF GR+ A+ + MV S G DV +YN LI
Sbjct: 344 LF----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
K+ V A+ + +M ++ +P+V +Y L+ G ++G + +A ++++M + + P++
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
F I CK + EAV++F+ + C+ + T+N LI+GLC++ +K A L
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
+ +G + + VT +T+I+ + G++ +A L+ +M + E+T+ +L++G + +
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 555 KSKVVVLLHKMAAEKLVVSDLS 576
K L KM + S++S
Sbjct: 580 VDKARSLFEKMLRDGHAPSNIS 601
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 217/451 (48%), Gaps = 17/451 (3%)
Query: 154 FNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL----VALKLF 209
+ LI L A G RL ++ D +V +L + R + +L
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMK----DEGIVFKESLFISIMRDYDKAGFPGQTTRLM 169
Query: 210 EEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGF 269
EM N + C+P +YN +++ L A + M R I P + T+ ++ F
Sbjct: 170 LEMRNVYS--CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAF 227
Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDT 329
C V++ A L +M +G P+ V + +I+ K ++++ +LLE M G PD
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
Query: 330 VTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYRE 389
T+N ++ G C RI+ A ++ M+ +G D +Y L+N CK +V+ A ++
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KD 343
Query: 390 MLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN-DVVPDSFTFATYIDGLCKNG 448
+ +P ++ +NTL+ G G L DA ++ M + +VPD T+ + I G K G
Sbjct: 344 LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
V A++V +RN C+ + +Y L++G CK+G++ A + + + G P+ V +
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
+I CKE ++ +A ++ +M K C P TF +L+ G + ++ + LL M +E
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 569 KLVVSDLSLSSKVVDLLSKD--KKYRECLNQ 597
+V + ++ ++ + L + K+ R+ +N+
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 141/272 (51%), Gaps = 5/272 (1%)
Query: 79 PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
P F L++ K + V +F+ + G PD++ N LI+ LC++ A +
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 516
Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP-NVVTFNTLINGLC 197
L ++ NTVT+N LIN G I EA +L ++ VF P + +T+N+LI GLC
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM-VFQGSPLDEITYNSLIKGLC 575
Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
R A LFE+M+ + A P ++ N +I+GLC+ G V++A E +M R P
Sbjct: 576 RAGEVDKARSLFEKMLRDGHA---PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
+++T+NSLI G C ++ +F ++ G+ PD VTFN ++++ CK G + LL
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
+ I+ G P+ T++ L+ + R R
Sbjct: 693 DEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 261 bits (667), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/479 (32%), Positives = 254/479 (53%), Gaps = 40/479 (8%)
Query: 59 NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
+I +A F M+ +P P + FT LLT A ++Y+TV+ +++ G+ DL+
Sbjct: 49 SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108
Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
+LI+C C+ S A VLG++++ + P+ VTF L++G C RI +A L +
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE-FGAICKPDVVTYNSIIDGLCKD 237
+PNVV +NTLI+GLC+ +AL+L EM + GA DVVTYN+++ GLC
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA----DVVTYNTLLTGLCYS 224
Query: 238 GFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTF 297
G A +L M R+INP+V+T+ +LI F + EA+ L+ EM+ + V P+ VT+
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 298 NAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVS 357
N++IN C G++ + +LM +G P+ VTYN+L+ GFC + +LF M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 358 KGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGD 417
+G D+++YN LI+ C+ K+ A+ ++ M+S R+ P +IT+ LL G
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG--------- 395
Query: 418 ALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLIN 477
LC NG + A+ F +R + + I YN +I+
Sbjct: 396 --------------------------LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIH 429
Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
GLCK +++ A +LF RL +G PD T + MI LCK G +A++L+ M+ + +
Sbjct: 430 GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 215/437 (49%), Gaps = 3/437 (0%)
Query: 135 AFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLIN 194
AF + ++ S P+ V F L+ R +K+ ++ ++ +F LI+
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 195 GLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN 254
CR AL + +M+ + G +P +VT+ S++ G C + A L++ M
Sbjct: 115 CFCRCSRLSFALSVLGKMM-KLGY--EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 255 INPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
PNV+ YN+LI G C + A L EM G+ DVVT+N ++ C G+
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
R+L M++R +NPD VT+ +L+D F G + A+EL+ M+ + +YN +IN
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
C ++ DA + M S+ P+V+TYNTL+SG + + + +KL +M D
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
FT+ T I G C+ G + A+ +F + + + I T+ L++GLC G +++A F
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
++ +V + MIH LCK +++KA +L + + P T+ ++ G +N
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471
Query: 555 KSKVVVLLHKMAAEKLV 571
+ + L+ +M E ++
Sbjct: 472 RREADELIRRMKEEGII 488
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 189/385 (49%), Gaps = 3/385 (0%)
Query: 205 ALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNS 264
A LF EMV+ + P +V + ++ + +M+ I+ ++ ++
Sbjct: 55 AFALFFEMVH---SQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 265 LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRG 324
LI FC A + +MM G +P +VTF ++++ C ++ L+ LM++ G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 325 VNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAV 384
P+ V YN+L+DG C G ++ A EL M KG DV +YN L+ C + DA
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 385 CLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL 444
+ R+M+ I P V+T+ L+ + GNL +A +L +M + V P++ T+ + I+GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 445 CKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDV 504
C +G + +A + F + + C + TYN LI+G CK + KLF R+ +G D+
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 505 VTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
T +T+IH C+ G++ A D+ M ++ P +T C LL G N + +V
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 565 MAAEKLVVSDLSLSSKVVDLLSKDK 589
M + + ++ + + L DK
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADK 436
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 155/327 (47%), Gaps = 11/327 (3%)
Query: 253 RNINPNVITYNS-----------LICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
R +NPN++ + L GF +++A LF EM+ + P +V F ++
Sbjct: 19 RVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLL 78
Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
+ + V + M G++ D ++ L+ FC R+S A + M+ G
Sbjct: 79 TATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYE 138
Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
+ ++ L++ C ++ DA L M+ P+V+ YNTL+ GL + G L AL+L
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
+++M+ + D T+ T + GLC +G +A ++ + + + T+ LI+ K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
G L A +L+ + P+ VT +++I+ LC G++ A M +K C P+ VT
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAE 568
+ TL+ GF + + + L +M+ E
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCE 345
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 261 bits (667), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/522 (31%), Positives = 264/522 (50%), Gaps = 23/522 (4%)
Query: 59 NITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFV 118
NI+ E V F M++ + SP + ++ IL+ D ++LF ++ + G P++
Sbjct: 185 NISFAENV--FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 119 LNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLN 178
N LI+ CK+ F +L + PN +++N +INGLC EGR+ E + + ++N
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 179 VFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDG 238
+ VT+NTLI G C+ N AL + EM+ P V+TY S+I +CK G
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG---LTPSVITYTSLIHSMCKAG 359
Query: 239 FVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFN 298
+++A E L QM+ R + PN TY +L+ GF EA + EM DNG P VVT+N
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 299 AMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK 358
A+IN +C GKM+ +LE M ++G++PD V+Y++++ GFC + A + MV K
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
G + D +Y+ LI C+ ++ ++A LY EML + P TY L++ G+L A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA----------------VQVFQAIRN 462
L+L ++M V+PD T++ I+GL K EA V I N
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 463 CKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDK 522
C + ++ LI G C G + A ++F + K PD + MIH C+ G + K
Sbjct: 600 C-SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 523 ANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV-VVLLH 563
A L +M + VT L++ + K +++ V++H
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVH 700
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/556 (27%), Positives = 266/556 (47%), Gaps = 55/556 (9%)
Query: 98 DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGIT-SGAFVVLGRILRSCFTPNTVTFNF 156
D +S+ ++G P + N +++ + S A V +L S +PN T+N
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210
Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
LI G C G I A LF K+ C PNVVT+NTLI+G C+ R KL M +
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
+P++++YN +I+GLC++G + + +L +M R + + +TYN+LI G+C ++
Sbjct: 271 ---LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
+A + EM+ +G+ P V+T+ ++I+ CK G M++ L+ M RG+ P+ TY +L+
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
DGF G ++ A + M G V +YN LIN +C K+EDA+ + +M + +
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
P V++Y+T+LSG + ++ +AL++ +M + PD+ T+++ I G C+ EA +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWL-- 514
++ + TY LIN C G L+ A +L + + KG +PDVVT S +I+ L
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 515 ------------------------------------------------CKEGQMDKANDL 526
C +G M +A+ +
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 527 LLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLS 586
M KN P + ++ G + K L +M ++ +++ + +V L
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA-LVKALH 686
Query: 587 KDKKYRECLNQFRHLL 602
K+ K E + H+L
Sbjct: 687 KEGKVNELNSVIVHVL 702
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 236/460 (51%), Gaps = 4/460 (0%)
Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR-IMEAARLFKK 176
V +L++ ++ + A ++ F P +++N +++ R I A +FK+
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 177 LNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCK 236
+ PNV T+N LI G C N VAL LF++M + C P+VVTYN++IDG CK
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG---CLPNVVTYNTLIDGYCK 252
Query: 237 DGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVT 296
+D +LL M + + PN+I+YN +I G C KE + EM G D VT
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 297 FNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV 356
+N +I CK+G + + M++ G+ P +TY SL+ C G ++RA E M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 357 SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLG 416
+G + +Y L++ + + +A + REM PSV+TYN L++G G +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 417 DALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLI 476
DA+ +++ M+ + PD +++T + G C++ V EA++V + + + TY+ LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 477 NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCV 536
G C+ R K AC L+ + G PD T + +I+ C EG ++KA L +M K +
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 537 PSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
P VT+ L+ G + ++ + LL K+ E+ V SD++
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 174/393 (44%), Gaps = 49/393 (12%)
Query: 56 KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
K+GN+ N A+ F D M P ++T L+ ++ + + + +N NG P
Sbjct: 357 KAGNM--NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
+ N LIN C G A VL + +P+ V+++ +++G C + EA R+ +
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV------NEF------GAICK-- 221
++ P+ +T+++LI G C R T A L+EEM+ +EF A C
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 222 ------------------PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
PDVVTY+ +I+GL K +AK LLL++ P+ +TY+
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594
Query: 264 ---------------SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
SLI GFC EA +F M+ +PD +N MI+ +C+ G
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
+ K L + M++ G TVT +L+ G+++ + V ++ +
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAK 714
Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
+L+ N ++ ++ + + EM + P+ I+
Sbjct: 715 VLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 258 bits (659), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 247/473 (52%), Gaps = 5/473 (1%)
Query: 79 PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
P +++F +L+ L + Q + + + + S GL PD ++ + G GA +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL-NVFACDPNVVTFNTLINGLC 197
+++ + + V+ N +++G C EGR+ +A +++ N P+ TFNTL+NGLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
+ + A+++ + M+ E PDV TYNS+I GLCK G V +A E+L QM R+ +P
Sbjct: 307 KAGHVKHAIEIMDVMLQEG---YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
N +TYN+LI C + +EA L + G+ PDV TFN++I C L
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
E M +G PD TYN L+D C G++ A + M GC V +YN LI+ CK
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
K +A ++ EM + + +TYNTL+ GL + + DA +L+D+M + PD +T+
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
+ + C+ G + +A + QA+ + CE I TY LI+GLCK GR++ A KL +Q
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDM-EAKNCVPSEVTFCTLLRGF 549
KG + +I L ++ + +A +L +M E P V++ + RG
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 226/423 (53%), Gaps = 5/423 (1%)
Query: 79 PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
P +F L+ L K + + + G PD++ N +I+ LCK+G A V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
L +++ +PNTVT+N LI+ LC E ++ EA L + L P+V TFN+LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
TRN VA++LFEEM ++ C+PD TYN +ID LC G +D+A +L QM+ +
Sbjct: 413 TRNHRVAMELFEEMRSKG---CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
VITYN+LI GFC + +EA+ +F EM +GV + VT+N +I+ CK +++ +L++
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
MI G PD TYNSL+ FC G I +A ++ +M S GC D+ +Y LI+ CK
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM-QLNDVVPDSFTF 437
+VE A L R + + I + YN ++ GLF+ +A+ L +M + N+ PD+ ++
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Query: 438 ATYIDGLCKNGF-VLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
GLC G + EAV + + L GL + +T KL + +
Sbjct: 650 RIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVM 709
Query: 497 HKG 499
K
Sbjct: 710 QKA 712
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 175/586 (29%), Positives = 288/586 (49%), Gaps = 36/586 (6%)
Query: 43 DGTSIAKFLNDRHKSGNITSNEAVY-----------FFDCMIK----MKPSP---GMTSF 84
D ++ + N K N + A+Y FD M K MK S G ++F
Sbjct: 62 DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTF 121
Query: 85 TILLTMLAKNKQYDTVVSLFK-RLNSNGLFPDLF----VLNLLI--NCLCKMGITSGAFV 137
IL+ A+ + D ++S+ ++ GL PD +LNLL+ N L + I+
Sbjct: 122 LILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMS 181
Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
V G P+ TFN LI LC ++ A + + + + P+ TF T++ G
Sbjct: 182 VWG------IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI 235
Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN-IN 256
+ AL++ E+MV EFG C V+ N I+ G CK+G V+ A + +M +++
Sbjct: 236 EEGDLDGALRIREQMV-EFG--CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
P+ T+N+L+ G C K A + M+ G PDV T+N++I+ CK G++ + +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
L+ MI R +P+TVTYN+L+ C ++ A EL + SKG DV ++N LI C
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
+ A+ L+ EM S+ P TYN L+ L G L +AL ++ +M+L+ T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
+ T IDG CK EA ++F + TYN LI+GLCK R++ A +L ++
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
+G PD T ++++ C+ G + KA D++ M + C P VT+ TL+ G + +
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 557 KVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
LL + + + ++ + + V+ L + +K E +N FR +L
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNP-VIQGLFRKRKTTEAINLFREML 637
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 186/393 (47%), Gaps = 42/393 (10%)
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
EAV D MI SP ++ L++ L K Q + L + L S G+ PD+ N LI
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
LC A + + P+ T+N LI+ LC++G++ EA + K++ + C
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
+V+T+NTLI+G C+ T A ++F+EM E + + + VTYN++IDGLCK V+ A
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEM--EVHGVSR-NSVTYNTLIDGLCKSRRVEDA 524
Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
+L+ QM P+ TYNSL+ FC D K+A + M NG +PD+VT+ +I+
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 304 NCKDGKMDKVNRLLELMIQRGVN------------------------------------P 327
CK G+++ ++LL + +G+N P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 328 DTVTYNSLMDGFC-LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
D V+Y + G C G I A + V ++ KG + S +L +E+ +
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG-LLTLSMEETLVK 703
Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDAL 419
M+ ++ R S +++ GL ++ DAL
Sbjct: 704 LVNMVMQKARFSEEEV-SMVKGLLKIRKFQDAL 735
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Query: 62 SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
+ EA FD M S ++ L+ L K+++ + L ++ G PD + N
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 122 LINCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
L+ C+ G I A +V C P+ VT+ LI+GLC GR+ A++L + + +
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGC-EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGF- 239
+ +N +I GL R R T A+ LF EM+ + A PD V+Y + GLC G
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA--PPDAVSYRIVFRGLCNGGGP 662
Query: 240 VDKAKELLLQMKDRNINPN 258
+ +A + L+++ ++ P
Sbjct: 663 IREAVDFLVELLEKGFVPE 681
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/541 (29%), Positives = 274/541 (50%), Gaps = 38/541 (7%)
Query: 46 SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPS-PGMTSFTILLTMLAKNKQYDTVVSLF 104
+++ L+ +SG+++ +AV +D ++++ S P + + LL++L K+++ ++
Sbjct: 136 ALSHVLHAYAESGSLS--KAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVY 193
Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMG-ITSGAFVVLGRILRSCFTPNTVTFNFLINGLCA 163
+ G D + +L+ +C G + G ++ GR + C PN V +N +I G C
Sbjct: 194 DEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCK 252
Query: 164 EGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM----------- 212
G I A +FK+L + P + TF T+ING C+ + + + +L E+
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 213 -----------------VNEFGAI----CKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
G I CKPDV TYN +I+ LCK+G + A L +
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
+ + PN ++Y LI +C ++ A L ++M + G +PD+VT+ +I+ G MD
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILI 371
+ +I RGV+PD YN LM G C GR A+ LF M+ + D Y Y LI
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 372 NANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVV 431
+ + ++A ++ + + ++ V+ +N ++ G + G L +AL +++M +V
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552
Query: 432 PDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKL 491
PD FT++T IDG K + A+++F+ + KC+ + TY LING C G K A +
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612
Query: 492 FHRLQHKGPIPDVVTCSTMIHWLCKEGQ-MDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
F +Q + +P+VVT +T+I L KE ++KA M CVP+EVTF LL+GFV
Sbjct: 613 FKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFV 672
Query: 551 Q 551
+
Sbjct: 673 K 673
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 235/496 (47%), Gaps = 20/496 (4%)
Query: 79 PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
P + +F ++ K + L + GL ++ LN +I+ + G
Sbjct: 273 PTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAES 332
Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
+G I+ + P+ T+N LIN LC EG+ A + + PN +++ LI C+
Sbjct: 333 IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392
Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
++ +A KL +M E G CKPD+VTY +I GL G +D A + +++ DR ++P+
Sbjct: 393 SKEYDIASKLLLQMA-ERG--CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
YN L+ G C + AK LF EM+D + PD + +I+ + G D+ ++
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
L +++GV D V +N+++ GFC G + A M + D ++Y+ +I+ K Q
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
+ A+ ++R M + +P+V+TY +L++G G+ A + +MQL D+VP+ T+
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYT 629
Query: 439 TYIDGLCKNGFVLE-AVQVFQAIRNCKCELRIETYNCLINGLCK--------------MG 483
T I L K LE AV ++ + KC T+NCL+ G K G
Sbjct: 630 TLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHG 689
Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
+ + FHR++ G ++ + LC G + A M K P V+F
Sbjct: 690 QSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFA 749
Query: 544 TLLRGF--VQNNKKSK 557
+L GF V N+K+ +
Sbjct: 750 AILHGFCVVGNSKQWR 765
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 173/400 (43%), Gaps = 53/400 (13%)
Query: 65 AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
AV F D K P S+ L+ K+K+YD L ++ G PD+ +LI+
Sbjct: 364 AVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH 423
Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
L G A + +++ +P+ +N L++GLC GR + A LF ++ P
Sbjct: 424 GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILP 483
Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
+ + TLI+G R+ + A K+F V E G K DVV +N++I G C+ G +D+A
Sbjct: 484 DAYVYATLIDGFIRSGDFDEARKVFSLSV-EKGV--KVDVVHHNAMIKGFCRSGMLDEAL 540
Query: 245 ELLLQMKDRNI-----------------------------------NPNVITYNSLICGF 269
+ +M + ++ PNV+TY SLI GF
Sbjct: 541 ACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
Query: 270 CCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK-MDKVNRLLELMIQRGVNPD 328
CC D+K A+ F EM + P+VVT+ +I K+ ++K ELM+ P+
Sbjct: 601 CCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN 660
Query: 329 TVTYNSLMDGFCLV--------------GRISRARELFVSMVSKGCRHDVYSYNILINAN 374
VT+N L+ GF G+ S E F M S G +YN +
Sbjct: 661 EVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCL 720
Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGN 414
C V+ A +M+ + P +++ +L G VGN
Sbjct: 721 CVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 172/356 (48%), Gaps = 5/356 (1%)
Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
R ++ + +KLF+ + +E + +S + L + ++ +++L +++ N+
Sbjct: 73 RIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKL 132
Query: 258 NVITYNSLICGFCCVDDWKEAKCLF---IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
+ ++ + +A ++ +E+ D+ PDV+ N++++ K ++
Sbjct: 133 THEALSHVLHAYAESGSLSKAVEIYDYVVELYDS--VPDVIACNSLLSLLVKSRRLGDAR 190
Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
++ + M RG + D + L+ G C G++ R+L KGC ++ YN +I
Sbjct: 191 KVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGY 250
Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
CK +E+A +++E+ + P++ T+ T+++G + G+ + +L+ +++ +
Sbjct: 251 CKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSV 310
Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
+ ID ++G+ ++ + I C+ + TYN LIN LCK G+ + A
Sbjct: 311 WFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDE 370
Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
KG IP+ ++ + +I CK + D A+ LLL M + C P VT+ L+ G V
Sbjct: 371 ASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 19/311 (6%)
Query: 65 AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
A F M+ P + L+ ++ +D +F G+ D+ N +I
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
C+ G+ A + R+ P+ T++ +I+G + + A ++F+ + C P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD-GFVDKA 243
NVVT+ +LING C + +A + F+EM + + P+VVTY ++I L K+ ++KA
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEM--QLRDLV-PNVVTYTTLIRSLAKESSTLEKA 645
Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWK----------EAKCLFIE----MMDNG 289
M PN +T+N L+ GF K LF E M +G
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705
Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
+N+ + C G + + M+++G +PD V++ +++ GFC+VG + R
Sbjct: 706 WSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWR 765
Query: 350 EL-FVSMVSKG 359
+ F ++ KG
Sbjct: 766 NMDFCNLGEKG 776
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 275/526 (52%), Gaps = 48/526 (9%)
Query: 11 SLASKAGYRCNFWCSFGRPPNPKTDLS-SHHFK------DGTSIAKFLNDRHKSGNITSN 63
++AS A + F + NP LS S F+ GT+I R NI +
Sbjct: 8 AIASTAKGFLHLHHHFLKNSNPGIVLSPSLRFRFWVRAFSGTTIDYREVLRSGLHNIKFD 67
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRL-NSNGL--FPDLFVLN 120
+A + F M P P + F +LT +AK + YD V++L+KR+ N+ G+ PDL+ N
Sbjct: 68 DAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCN 127
Query: 121 LLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVF 180
+L+NC C+ CF P++ L G++M+
Sbjct: 128 ILVNCFCR-----------------CFQPSS--------ALSYLGKMMK----------L 152
Query: 181 ACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFV 240
+P++VT ++L+NG C + + A+ + +M + G K DVV +ID LCK+ V
Sbjct: 153 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM-EKMG--IKRDVVVDTILIDTLCKNRLV 209
Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAM 300
A E+L +MKDR I+PNV+TY+SLI G C +A+ EM + P+V+TF+A+
Sbjct: 210 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSAL 269
Query: 301 INYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGC 360
I+ K GK+ KV+ + ++MIQ ++P+ TY+SL+ G C+ R+ A ++ M+SKGC
Sbjct: 270 IDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 329
Query: 361 RHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK 420
+V +Y+ L N K +V+D + L +M + + ++ NTL+ G FQ G + AL
Sbjct: 330 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALG 389
Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
+ M N ++P+ ++ + GL NG V +A+ F+ ++ + +L I TY +I+G+C
Sbjct: 390 VFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMC 449
Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDL 526
K +K A LF++L+ K PD + MI L + G +A+ L
Sbjct: 450 KACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 495
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 180/369 (48%), Gaps = 14/369 (3%)
Query: 241 DKAKELLLQMKDRNINPNVITYNSLICGFC-------CVDDWKEAKCLFIEMMDN-GVQP 292
D A L + M P+++ +N ++ ++ WK IE + + P
Sbjct: 67 DDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKR-----IENAEGIEISP 121
Query: 293 DVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELF 352
D+ T N ++N C+ + L M++ G+ PD VT +SL++GFCL I A +
Sbjct: 122 DLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVA 181
Query: 353 VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQV 412
M G + DV ILI+ CK++ V A+ + + M I P+V+TY++L++GL +
Sbjct: 182 GQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKS 241
Query: 413 GNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETY 472
G L DA + + +M + P+ TF+ ID K G + + V++ + + + TY
Sbjct: 242 GRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTY 301
Query: 473 NCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEA 532
+ LI GLC R+ A K+ + KG P+VVT ST+ + K ++D LL DM
Sbjct: 302 SSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ 361
Query: 533 KNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
+ + V+ TL++G+ Q K + + M + L+ + S + + L + + +
Sbjct: 362 RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFA-NGEVE 420
Query: 593 ECLNQFRHL 601
+ L++F H+
Sbjct: 421 KALSRFEHM 429
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 163/347 (46%), Gaps = 3/347 (0%)
Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRN---INPNVITYNSLICGFCCVDDWKEA 278
P +V +N ++ + K D L ++++ I+P++ T N L+ FC A
Sbjct: 83 PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 142
Query: 279 KCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDG 338
+MM G++PD+VT ++++N C + + M + G+ D V L+D
Sbjct: 143 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 202
Query: 339 FCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPS 398
C + A E+ M +G +V +Y+ LI CK ++ DA EM S++I P+
Sbjct: 203 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 262
Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQ 458
VIT++ L+ + G L + M + P+ FT+++ I GLC + V EA+++
Sbjct: 263 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 322
Query: 459 AIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
+ + C + TY+ L NG K R+ KL + +G + V+C+T+I + G
Sbjct: 323 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 382
Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
++D A + M + +P+ ++ +L G N + K + M
Sbjct: 383 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 429
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 38/230 (16%)
Query: 367 YNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQ------VGNL----- 415
Y ++ + + K +DA L+ M PS++ +N +L+ + + V NL
Sbjct: 53 YREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIE 112
Query: 416 ---------------------------GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
AL + KM + PD T ++ ++G C +
Sbjct: 113 NAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSN 172
Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
+ +AV V + + + LI+ LCK + A ++ R++ +G P+VVT S
Sbjct: 173 SIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYS 232
Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
++I LCK G++ A L +M++K P+ +TF L+ + + K SKV
Sbjct: 233 SLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 282
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 154/509 (30%), Positives = 254/509 (49%), Gaps = 4/509 (0%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
EA+ F M + + P S LL AK + D V FK + G P +F N++
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIM 268
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I+C+CK G A + + P+TVT+N +I+G GR+ + F+++ C
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
+P+V+T+N LIN C+ + L+ + EM G KP+VV+Y++++D CK+G + +
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMK---GNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
A + + M+ + PN TY SLI C + + +A L EM+ GV+ +VVT+ A+I+
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
C +M + L M GV P+ +YN+L+ GF + RA EL + +G +
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
D+ Y I C +K+E A + EM I+ + + Y TL+ F+ GN + L L+
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN-CKCELRIETYNCLINGLCK 481
D+M+ D+ TF IDGLCKN V +AV F I N + + +I+GLCK
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
+++ A LF ++ KG +PD ++++ K+G + +A L M +
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685
Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
+ +L+ G N+ K L +M E +
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 252/507 (49%), Gaps = 4/507 (0%)
Query: 79 PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
PG F L ++L + + F ++ +FP N L++ K+G T
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
++ + P T+N +I+ +C EG + A LF+++ P+ VT+N++I+G +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
+ FEEM + C+PDV+TYN++I+ CK G + E +MK + PN
Sbjct: 310 VGRLDDTVCFFEEMKD---MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
V++Y++L+ FC ++A +++M G+ P+ T+ ++I+ NCK G + RL
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
M+Q GV + VTY +L+DG C R+ A ELF M + G ++ SYN LI+ K +
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
++ A+ L E+ I+P ++ Y T + GL + + A ++++M+ + +S +
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
T +D K+G E + + ++ E+ + T+ LI+GLCK + A F+R+ +
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606
Query: 499 -GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
G + + MI LCK+ Q++ A L M K VP + +L+ G + +
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666
Query: 558 VVVLLHKMAAEKLVVSDLSLSSKVVDL 584
+ L KMA + + L+ +S V L
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGL 693
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 233/459 (50%), Gaps = 3/459 (0%)
Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
R+ P F+ L + L G + EA + F K+ F P + N L++ + T
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
+ F++M+ GA +P V TYN +ID +CK+G V+ A+ L +MK R + P+ +TYN
Sbjct: 245 DVKRFFKDMI---GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 301
Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
S+I GF V + C F EM D +PDV+T+NA+IN CK GK+ M
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
G+ P+ V+Y++L+D FC G + +A + +V M G + Y+Y LI+ANCK + DA
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
L EML + +V+TY L+ GL + +A +L KM V+P+ ++ I G
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
K + A+++ ++ + + Y I GLC + +++ A + + ++ G +
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
+ +T++ K G + LL +M+ + + VTFC L+ G +N SK V +
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
Query: 564 KMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
+++ + + ++ ++ + ++D L KD + F ++
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV 640
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 177/379 (46%), Gaps = 39/379 (10%)
Query: 79 PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
P + S++ L+ K + + + GL P+ + LI+ CK+G S AF +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
+L+ N VT+ LI+GLC R+ EA LF K++ PN+ ++N LI+G +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
+N AL+L E+ G KPD++ Y + I GLC ++ AK ++ +MK+ I N
Sbjct: 485 AKNMDRALELLNELK---GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 259 VITYNSLI----------CGFCCVDDWKEAK--------CLFIEMM-------------- 286
+ Y +L+ G +D+ KE C+ I+ +
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
Query: 287 ----DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
D G+Q + F AMI+ CKD +++ L E M+Q+G+ PD Y SLMDG
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661
Query: 343 GRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITY 402
G + A L M G + D+ +Y L+ +++ A EM+ E I P +
Sbjct: 662 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLC 721
Query: 403 NTLLSGLFQVGNLGDALKL 421
++L +++G + +A++L
Sbjct: 722 ISVLKKHYELGCIDEAVEL 740
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 103/278 (37%), Gaps = 85/278 (30%)
Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR---------------PS 398
SM G +H V SY I+ + + DA + +EM+ + P
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191
Query: 399 VITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS------------------------ 434
++ L S L +G L +A++ KM+ V P +
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 435 -----------FTFATYIDGLCKNGFVLEA------------------------------ 453
FT+ ID +CK G V A
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 454 -----VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
V F+ +++ CE + TYN LIN CK G+L + + ++ G P+VV+ S
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 509 TMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
T++ CKEG M +A +DM VP+E T+ +L+
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 263/514 (51%), Gaps = 13/514 (2%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
+EA FD M K+ P +++IL+ M + + DT +S + GL ++ N L
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
IN CK G S A + ++ P VT+ L+ G C++G+I +A RL+ ++
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
P++ TF TL++GL R A+KLF EM E+ KP+ VTYN +I+G C++G + K
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNV--KPNRVTYNVMIEGYCEEGDMSK 560
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
A E L +M ++ I P+ +Y LI G C EAK + + + + + +++
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS----MVSK 358
C++GK+++ + + M+QRGV+ D V Y L+DG + R+LF M +
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG----SLKHKDRKLFFGLLKEMHDR 676
Query: 359 GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDA 418
G + D Y +I+A K ++A ++ M++E P+ +TY +++GL + G + +A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 419 LKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE-AVQVFQAIRNCKCELRIETYNCLIN 477
L KMQ VP+ T+ ++D L K ++ AV++ AI TYN LI
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA-NTATYNMLIR 795
Query: 478 GLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVP 537
G C+ GR++ A +L R+ G PD +T +TMI+ LC+ + KA +L M K P
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 538 SEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLV 571
V + TL+ G + K L ++M + L+
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/572 (27%), Positives = 264/572 (46%), Gaps = 72/572 (12%)
Query: 64 EAVYFFDCMI-KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
+ V F MI K+ P + + + LL L K + + + LF + S G+ PD+++ +
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I LC++ S A ++ + + N V +N LI+GLC + ++ EA + K L
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEM------------------------------ 212
P+VVT+ TL+ GLC+ + + L++ +EM
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALN 353
Query: 213 ----VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
V +FG P++ YN++ID LCK +A+ L +M + PN +TY+ LI
Sbjct: 354 LVKRVVDFGV--SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 269 FCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPD 328
FC A EM+D G++ V +N++IN +CK G + + MI + + P
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
VTY SLM G+C G+I++A L+ M KG +Y++ L++ + + DAV L+
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
EM ++P+ +TYN ++ G + G++ A + + +M +VPD++++ I GLC G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA---CK--------------- 490
EA + CEL Y L++G C+ G+L+ A C+
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 491 -----------------LFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
L + +G PD V ++MI K G +A + M +
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
CVP+EVT+ ++ G + ++ VL KM
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/510 (28%), Positives = 254/510 (49%), Gaps = 7/510 (1%)
Query: 84 FTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
F +L+ ++++ V +FK + + L P++ L+ L++ L K A + +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
+ P+ + +I LC + A + + CD N+V +N LI+GLC+ +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
A+ + +++ G KPDVVTY +++ GLCK + E++ +M +P+
Sbjct: 279 WEAVGIKKDLA---GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
+SL+ G +EA L ++D GV P++ +NA+I+ CK K + L + M +
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 323 RGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVED 382
G+ P+ VTY+ L+D FC G++ A MV G + VY YN LIN +CK +
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 383 AVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYID 442
A EM+++++ P+V+TY +L+ G G + AL+L +M + P +TF T +
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 443 GLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIP 502
GL + G + +AV++F + + TYN +I G C+ G + A + + KG +P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 503 DVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLL 562
D + +IH LC GQ +A + + NC +E+ + LL GF + K + + +
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 563 HKMAAEKLVVSDLSLSSKVVD--LLSKDKK 590
+M ++ V DL ++D L KD+K
Sbjct: 636 QEM-VQRGVDLDLVCYGVLIDGSLKHKDRK 664
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 149/501 (29%), Positives = 255/501 (50%), Gaps = 7/501 (1%)
Query: 70 DCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKM 129
D M+ ++ SP + + L+ L K + + ++L KR+ G+ P+LFV N LI+ LCK
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
A ++ R+ + PN VT++ LI+ C G++ A ++ +V +
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
N+LING C+ + A EM+N+ +P VVTY S++ G C G ++KA L +
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINK---KLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
M + I P++ T+ +L+ G ++A LF EM + V+P+ VT+N MI C++G
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-CRHDVYSYN 368
M K L+ M ++G+ PDT +Y L+ G CL G+ S A+ +FV + KG C + Y
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYT 616
Query: 369 ILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLN 428
L++ C++ K+E+A+ + +EM+ + ++ Y L+ G + + L+ +M
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 429 DVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTA 488
+ PD + + ID K G EA ++ + N C TY +INGLCK G + A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 489 CKLFHRLQHKGPIPDVVTCSTMIHWLCK-EGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
L ++Q +P+ VT + L K E M KA +L + K + + T+ L+R
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH-NAILKGLLANTATYNMLIR 795
Query: 548 GFVQNNKKSKVVVLLHKMAAE 568
GF + + + L+ +M +
Sbjct: 796 GFCRQGRIEEASELITRMIGD 816
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 189/412 (45%), Gaps = 38/412 (9%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
N+A+ + M +P + +FT LL+ L + V LF + + P+ N++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I C+ G S AF L + P+T ++ LI+GLC G+ EA L+ C
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
+ N + + L++G CR AL + +EMV + D+V Y +IDG K
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL---DLVCYGVLIDGSLKHKDRKL 665
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
LL +M DR + P+ + Y S+I D+KEA ++ M++ G P+ VT+ A+IN
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 303 YNCKDG----------KMDKVNRL-------------------------LELMIQRGVNP 327
CK G KM V+ + L I +G+
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
+T TYN L+ GFC GRI A EL M+ G D +Y +IN C+ V+ A+ L+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
M + IRP + YNTL+ G G +G A +L ++M ++P++ T T
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 178/386 (46%), Gaps = 52/386 (13%)
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
+AV F+ M + P ++ +++ + K + G+ PD + LI
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAAR----------- 172
+ LC G S A V + + + N + + L++G C EG++ EA
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 173 ------------------------LFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
L K+++ P+ V + ++I+ +T + A +
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
++ M+NE C P+ VTY ++I+GLCK GFV++A+ L +M+ + PN +TY
Sbjct: 705 WDLMINEG---CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG----- 756
Query: 269 FCCVD-------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMI 321
C +D D ++A L ++ G+ + T+N +I C+ G++++ + L+ MI
Sbjct: 757 -CFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 322 QRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVE 381
GV+PD +TY ++++ C + +A EL+ SM KG R D +YN LI+ C ++
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 382 DAVCLYREMLSERIRPSVITYNTLLS 407
A L EML + + P+ T T S
Sbjct: 875 KATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 124/292 (42%), Gaps = 54/292 (18%)
Query: 356 VSKGCRHDVYSYNILINA------------------------------------NCK--- 376
+ +G H S+ ILI+A CK
Sbjct: 96 LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSS 155
Query: 377 -------------DQKVEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLI 422
++V D V +++ M+++ + P V T + LL GL + + G A++L
Sbjct: 156 SSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215
Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
+ M + PD + + I LC+ + A ++ + C++ I YN LI+GLCK
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275
Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
++ A + L K PDVVT T+++ LCK + + +++ +M PSE
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYREC 594
+L+ G + K + + L+ K + V +L + + ++D L K +K+ E
Sbjct: 336 SSLVEGLRKRGKIEEALNLV-KRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 268/569 (47%), Gaps = 63/569 (11%)
Query: 45 TSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLF 104
T + F + K+ E F M+ S +++F LL +L K L
Sbjct: 186 TVVGGFYEENFKA------EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 105 KRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAE 164
++ G+ P+LF NL I LC+ G GA ++G ++ P+ +T+N LI GLC
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 165 GRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMV-NEFGAICKPD 223
+ EA K+ +P+ T+NTLI G C+ +A ++ + V N F PD
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF----VPD 355
Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
TY S+IDGLC +G ++A L + + I PNVI YN+LI G EA L
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 284 EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVG 343
EM + G+ P+V TFN ++N CK G + + L+++MI +G PD T+N L+ G+
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
++ A E+ M+ G DVY+YN L+N CK K ED + Y+ M+ + P++ T+N
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
LL L + L +AL L+++M+ V PD+ TF T IDG CKNG + A +F+ +
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 464 -KCELRIETYNCLI-----------------------------------NGLCKMGRLKT 487
K TYN +I +G CK G +
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655
Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV-TFCTLL 546
K + G IP + T +I+ LC E ++ +A ++ M K VP V T C +
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDV- 714
Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
+KK ++AA KLV+ DL
Sbjct: 715 ------DKK--------EVAAPKLVLEDL 729
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 160/572 (27%), Positives = 272/572 (47%), Gaps = 8/572 (1%)
Query: 3 FKSSHRSF-SLASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNIT 61
FK + ++ S+ K GY F + + ++ +H +G + N K
Sbjct: 36 FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHML-EGVYVGAMKNYGRKG---K 91
Query: 62 SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
EAV F+ M P + S+ ++++L + +D ++ R+ G+ PD++ +
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
+ CK A +L + N V + ++ G E E LF K+
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
+ TFN L+ LC+ + KL ++++ G + P++ TYN I GLC+ G +D
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR-GVL--PNLFTYNLFIQGLCQRGELD 268
Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
A ++ + ++ P+VITYN+LI G C ++EA+ +M++ G++PD T+N +I
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
CK G + R++ + G PD TY SL+DG C G +RA LF + KG +
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
+V YN LI + +A L EM + + P V T+N L++GL ++G + DA L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
+ M PD FTF I G + A+++ + + + + TYN L+NGLCK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
+ + + + + KG P++ T + ++ LC+ ++D+A LL +M+ K+ P VT
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
F TL+ GF +N L KM V S
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS 600
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 184/367 (50%), Gaps = 5/367 (1%)
Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
++ + AL++F M E G K + TY S+I+ L G + +E+L+ M++ N+ ++
Sbjct: 18 KDPMKALEMFNSMRKEVGF--KHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRE-NVGNHM 74
Query: 260 I--TYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
+ Y + + +EA +F M +P V ++NA+++ G D+ +++
Sbjct: 75 LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY 134
Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
M RG+ PD ++ M FC R A L +M S+GC +V +Y ++ ++
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
+ L+ +ML+ + + T+N LL L + G++ + KL+DK+ V+P+ FT+
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
+I GLC+ G + AV++ + + + TYN LI GLCK + + A ++ +
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
+G PD T +T+I CK G + A ++ D VP + T+ +L+ G + ++
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 558 VVVLLHK 564
+ L ++
Sbjct: 375 ALALFNE 381
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 6/202 (2%)
Query: 396 RPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGL---CKNGFVLE 452
+ ++ TY +++ L G +++ M+ N V + Y+ + + G V E
Sbjct: 37 KHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN--VGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
AV VF+ + CE + +YN +++ L G A K++ R++ +G PDV + + +
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
CK + A LL +M ++ C + V +CT++ GF + N K++ L KM A + +
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 573 SDLSLSSKVVDLLSKDKKYREC 594
LS +K++ +L K +EC
Sbjct: 215 C-LSTFNKLLRVLCKKGDVKEC 235
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 245 bits (626), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 164/535 (30%), Positives = 260/535 (48%), Gaps = 43/535 (8%)
Query: 87 LLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSC 146
L+ L +++ ++ S ++++ F + L+ L+ C +M T AF VL +L+
Sbjct: 78 LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137
Query: 147 FTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVAL 206
F N N L+ GLC +A L +++ + P+V ++NT+I G C + AL
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 207 KLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLI 266
+L EM G+ C +VT+ +ID CK G +D+A L +MK + +++ Y SLI
Sbjct: 198 ELANEMK---GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 267 CGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVN 326
GFC + K LF E+++ G P +T+N +I CK G++ + + + E MI+RGV
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
P+ TY L+DG C VG+ A +L M+ K + +YNI+IN CKD V DAV +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND---VVPDSFTFATYIDG 443
M R RP ITYN LL GL G+L +A KL+ + L D PD ++ I G
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL-YLMLKDSSYTDPDVISYNALIHG 433
Query: 444 LCKN-----------------------------------GFVLEAVQVFQAIRNCKCELR 468
LCK G V +A+++++ I + K
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
+TY +I+G CK G L A L +++ P V + ++ LCKEG +D+A L
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553
Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVD 583
+M+ N P V+F ++ G ++ LL M+ L DL SK+++
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL-SPDLFTYSKLIN 607
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 247/496 (49%), Gaps = 5/496 (1%)
Query: 72 MIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI 131
M+K + + + ILL L +N + VSL + + N L PD+F N +I C+
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 132 TSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNT 191
A + + S + + VT+ LI+ C G++ EA K++ + ++V + +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 192 LINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK 251
LI G C LF+E++ + C +TYN++I G CK G + +A E+ M
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPC---AITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 252 DRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD 311
+R + PNV TY LI G C V KEA L M++ +P+ VT+N +IN CKDG +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 312 KVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMV--SKGCRHDVYSYNI 369
++ELM +R PD +TYN L+ G C G + A +L M+ S DV SYN
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
LI+ CK+ ++ A+ +Y ++ + +T N LL+ + G++ A++L ++ +
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
+V +S T+ IDG CK G + A + +R + + + YNCL++ LCK G L A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
+LF +Q PDVV+ + MI K G + A LL+ M P T+ L+ F
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Query: 550 VQNNKKSKVVVLLHKM 565
++ + + KM
Sbjct: 610 LKLGYLDEAISFFDKM 625
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 237/471 (50%), Gaps = 5/471 (1%)
Query: 78 SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
S + ++ IL+ K + D + K + GL DL V LI C G
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
+ +L +P +T+N LI G C G++ EA+ +F+ + PNV T+ LI+GLC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
T AL+L M+ + +P+ VTYN II+ LCKDG V A E++ MK R P
Sbjct: 329 GVGKTKEALQLLNLMIEKDE---EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 258 NVITYNSLICGFCCVDDWKEA-KCLFIEMMDNG-VQPDVVTFNAMINYNCKDGKMDKVNR 315
+ ITYN L+ G C D EA K L++ + D+ PDV+++NA+I+ CK+ ++ +
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 316 LLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANC 375
+ +L++++ D VT N L++ G +++A EL+ + + +Y +I+ C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505
Query: 376 KDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSF 435
K + A L +M ++PSV YN LLS L + G+L A +L ++MQ ++ PD
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 436 TFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRL 495
+F IDG K G + A + + + TY+ LIN K+G L A F ++
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Query: 496 QHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
G PD C +++ + +G+ DK +L+ + K+ V + CT++
Sbjct: 626 VDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVM 676
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 195/384 (50%), Gaps = 5/384 (1%)
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
EA F+ MI+ P + ++T L+ L + + L + P+ N++I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359
Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL--NVFA 181
N LCK G+ + A ++ + + P+ +T+N L+ GLCA+G + EA++L + +
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419
Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
DP+V+++N LI+GLC+ AL +++ +V + GA D VT N +++ K G V+
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA---GDRVTTNILLNSTLKAGDVN 476
Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
KA EL Q+ D I N TY ++I GFC AK L +M + +QP V +N ++
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
+ CK+G +D+ RL E M + PD V++N ++DG G I A L V M G
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
D+++Y+ LIN K +++A+ + +M+ P +++L G +L
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTEL 656
Query: 422 IDKMQLNDVVPDSFTFATYIDGLC 445
+ K+ D+V D T +D +C
Sbjct: 657 VKKLVDKDIVLDKELTCTVMDYMC 680
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
Query: 344 RISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
++ A +F V G ++ N L+ + + E A YR+ML + ++ +
Sbjct: 53 QLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
LL Q+ G A ++ M + + + GLC+N +AV + + +R
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
+ +YN +I G C+ L+ A +L + ++ G +VT +I CK G+MD+A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGF 549
L +M+ V + +L+RGF
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGF 257
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850, chloroplastic
OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/569 (30%), Positives = 273/569 (47%), Gaps = 52/569 (9%)
Query: 46 SIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFK 105
S+AK DR EA F + + P ++ +++ +K + D + L
Sbjct: 477 SLAKAGRDR---------EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 527
Query: 106 RLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEG 165
+ NG PD+ V+N LIN L K A+ + R+ P VT+N L+ GL G
Sbjct: 528 EMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 587
Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVV 225
+I EA LF+ + C PN +TFNTL + LC+ +ALK+ +M++ C PDV
Sbjct: 588 KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD---MGCVPDVF 644
Query: 226 TYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG----------------- 268
TYN+II GL K+G V +A QMK + + P+ +T +L+ G
Sbjct: 645 TYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 269 -FCCVDD-----WKE--AKCLFIEMMDNGVQ-PDVVTFNAM-----------INYNCKDG 308
+ C D W++ L +DN V + + N + I Y+CK
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHN 763
Query: 309 KMDKVNRLLELMIQR-GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
+ L E + GV P TYN L+ G I A+++F+ + S GC DV +Y
Sbjct: 764 NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATY 823
Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI-DKMQ 426
N L++A K K+++ LY+EM + + IT+N ++SGL + GN+ DAL L D M
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLK 486
D P + T+ IDGL K+G + EA Q+F+ + + C YN LING K G
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 487 TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLL 546
AC LF R+ +G PD+ T S ++ LC G++D+ +++ P V + ++
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 547 RGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
G ++++ + +VL ++M + + DL
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 249/499 (49%), Gaps = 39/499 (7%)
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
EA+ + MI P + +++ L+ L K + D+V+ L K + + GL P+++ + I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
L + G + A+ +L R+ P+ VT+ LI+ LC ++ A +F+K+
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
P+ VT+ TL++ R+ L ++K F + + G + PDVVT+ ++D LCK G +A
Sbjct: 326 PDRVTYITLLDRFSDNRD-LDSVKQFWSEMEKDGHV--PDVVTFTILVDALCKAGNFGEA 382
Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
+ L M+D+ I PN+ TYN+LICG V +A LF M GV+P T+ I+Y
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 304 NCKDGKMDKVNRLLELMIQRGVNP-----------------------------------D 328
K G E M +G+ P D
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 329 TVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYR 388
+VTYN +M + VG I A +L M+ GC DV N LIN K +V++A ++
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 389 EMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNG 448
M +++P+V+TYNTLL+GL + G + +A++L + M P++ TF T D LCKN
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 449 FVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCS 508
V A+++ + + C + TYN +I GL K G++K A FH+++ K PD VT
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLC 681
Query: 509 TMIHWLCKEGQMDKANDLL 527
T++ + K ++ A ++
Sbjct: 682 TLLPGVVKASLIEDAYKII 700
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 173/621 (27%), Positives = 276/621 (44%), Gaps = 57/621 (9%)
Query: 4 KSSHRSFSL---ASKAGYRCNFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKSGNI 60
KSS S S+ +SK + + G P TD S +FK S+A LN H +
Sbjct: 65 KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFK---SVAGNLNLVHTTETC 121
Query: 61 TS-----------NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
E Y FD M K ++ + L+ +++
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIME 169
G + + N LI+ L K + A V R++ F P+ T++ L+ GL I
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 170 AARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNS 229
L K++ PNV TF I L R A ++ + M +E C PDVVTY
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG---CGPDVVTYTV 298
Query: 230 IIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG 289
+ID LC +D AKE+ +MK P+ +TY +L+ F D K + EM +G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 290 VQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRAR 349
PDVVTF +++ CK G + L++M +G+ P+ TYN+L+ G V R+ A
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSV---------- 399
ELF +M S G + Y+Y + I+ K A+ + +M ++ I P++
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 400 -------------------------ITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
+TYN ++ +VG + +A+KL+ +M N PD
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
+ I+ L K V EA ++F ++ K + + TYN L+ GL K G+++ A +LF
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
+ KG P+ +T +T+ LCK ++ A +L M CVP T+ T++ G V+N +
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 555 KSKVVVLLHKMAAEKLVVSDL 575
+ + H+M +KLV D
Sbjct: 659 VKEAMCFFHQM--KKLVYPDF 677
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 146/572 (25%), Positives = 256/572 (44%), Gaps = 77/572 (13%)
Query: 47 IAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKR 106
+ +N +K+ + +EA F M +MK P + ++ LL L KN + + LF+
Sbjct: 541 VNSLINTLYKADRV--DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 107 LNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGR 166
+ G P+ N L +CLCK + A +L +++ P+ T+N +I GL G+
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 167 IMEAARLFKKL-------------------------------------------NVFACD 183
+ EA F ++ N+F D
Sbjct: 659 VKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWED 718
Query: 184 -----------PNVVTFNT--LINGLCRTRNTLV---------------ALKLFEEMVNE 215
N V+F+ + NG+CR ++++ A LFE+ +
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDW 275
G +P + TYN +I GL + ++ A+++ LQ+K P+V TYN L+ +
Sbjct: 779 LGV--QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 276 KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMD-KVNRLLELMIQRGVNPDTVTYNS 334
E L+ EM + + + +T N +I+ K G +D ++ +LM R +P TY
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
L+DG GR+ A++LF M+ GCR + YNILIN K + + A L++ M+ E
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
+RP + TY+ L+ L VG + + L +++ + + PD + I+GL K+ + EA+
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 455 QVFQAIRNCK-CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
+F ++ + + TYN LI L G ++ A K+++ +Q G P+V T + +I
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTL 545
G+ + A + M P+ T+ L
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 189/384 (49%), Gaps = 7/384 (1%)
Query: 98 DTVVSLFKRLNSNGLFPDL-FVLNLLINCLCKMGITSGAFVVLGRILRSC-FTPNTVTFN 155
D VS +RL +NG+ D +L +I CK SGA + + + P T+N
Sbjct: 730 DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN 789
Query: 156 FLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE 215
LI GL I A +F ++ C P+V T+N L++ ++ +L++EM
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849
Query: 216 FGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ-MKDRNINPNVITYNSLICGFCCVDD 274
C+ + +T+N +I GL K G VD A +L M DR+ +P TY LI G
Sbjct: 850 E---CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
EAK LF M+D G +P+ +N +IN K G+ D L + M++ GV PD TY+
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
L+D C+VGR+ F + G DV YN++IN K ++E+A+ L+ EM + R
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 395 -IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
I P + TYN+L+ L G + +A K+ +++Q + P+ FTF I G +G A
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086
Query: 454 VQVFQAIRNCKCELRIETYNCLIN 477
V+Q + TY L N
Sbjct: 1087 YAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 159/611 (26%), Positives = 261/611 (42%), Gaps = 86/611 (14%)
Query: 56 KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
++G I NEA M P + ++T+L+ L ++ D +F+++ + PD
Sbjct: 270 RAGKI--NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
L++ + + P+ VTF L++ LC G EA
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
+ PN+ T+NTLI GL R AL+LF M G KP TY ID
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM-ESLGV--KPTAYTYIVFIDYYG 444
Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
K G A E +MK + I PN++ N+ + +EAK +F + D G+ PD V
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
T+N M+ K G++D+ +LL M++ G PD + NSL++ R+ A ++F+ M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
+ V +YN L+ K+ K+++A+ L+ M+ + P+ IT+NTL L + +
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRN------------- 462
ALK++ KM VPD FT+ T I GL KNG V EA+ F ++
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 684
Query: 463 ---CKCEL-----RIET---YNC--------------------------------LINGL 479
K L +I T YNC + NG+
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Query: 480 CKMGR------LKTACK---------LFHRLQHK-GPIPDVVTCSTMIHWLCKEGQMDKA 523
C+ G ++ +CK LF + G P + T + +I L + ++ A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEK---------LVVSD 574
D+ L +++ C+P T+ LL + ++ K ++ L +M+ + +V+S
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 575 LSLSSKVVDLL 585
L + V D L
Sbjct: 865 LVKAGNVDDAL 875
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 3/247 (1%)
Query: 56 KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
K+GN+ +Y+ D M SP ++ L+ L+K+ + LF+ + G P+
Sbjct: 867 KAGNVDDALDLYY-DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
+ N+LIN K G A + R+++ P+ T++ L++ LC GR+ E FK
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLC 235
+L +P+VV +N +INGL ++ AL LF EM G PD+ TYNS+I L
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG--ITPDLYTYNSLILNLG 1043
Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
G V++A ++ +++ + PNV T+N+LI G+ + A ++ M+ G P+
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Query: 296 TFNAMIN 302
T+ + N
Sbjct: 1104 TYEQLPN 1110
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 151/530 (28%), Positives = 263/530 (49%), Gaps = 10/530 (1%)
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKN-KQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
EA F+ M+ + S + LT L+K+ + T + +F+ G+ ++ N++
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I+ +C++G A +L + +TP+ ++++ ++NG C G + + +L + +
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
PN + ++I LCR A + F EM+ + G + PD V Y ++IDG CK G +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GIL--PDTVVYTTLIDGFCKRGDIRA 369
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
A + +M R+I P+V+TY ++I GFC + D EA LF EM G++PD VTF +IN
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
CK G M R+ MIQ G +P+ VTY +L+DG C G + A EL M G +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
++++YN ++N CK +E+AV L E + + +TY TL+ + G + A +++
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
+M + P TF ++G C +G + + ++ + T+N L+ C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
LK A ++ + +G PD T ++ CK M +A L +M+ K S T+
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 543 CTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
L++GF++ K + + +M E L+ ++ D S D KY+
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRRE-----GLAADKEIFDFFS-DTKYK 713
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/570 (27%), Positives = 278/570 (48%), Gaps = 10/570 (1%)
Query: 36 LSSHHFKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTS--FTILLTMLAK 93
++S K S+ +R K N+T + V FFD ++ G F + +L
Sbjct: 130 VASKDLKVAQSLISSFWERPKL-NVT-DSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVD 187
Query: 94 NKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGI-TSGAFVVLGRILRSCFTPNTV 152
+F+++ + GL + N+ + L K T+ A +V N
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 153 TFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM 212
++N +I+ +C GRI EA L + + P+V++++T++NG CR KL E M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 213 VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCV 272
+ KP+ Y SII LC+ + +A+E +M + I P+ + Y +LI GFC
Sbjct: 308 KRKG---LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 273 DDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTY 332
D + A F EM + PDV+T+ A+I+ C+ G M + +L M +G+ PD+VT+
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 333 NSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS 392
L++G+C G + A + M+ GC +V +Y LI+ CK+ ++ A L EM
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 393 ERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLE 452
++P++ TYN++++GL + GN+ +A+KL+ + + + D+ T+ T +D CK+G + +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 453 AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIH 512
A ++ + + + I T+N L+NG C G L+ KL + + KG P+ T ++++
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 513 WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVV 572
C + A + DM ++ P T+ L++G + + L +M + V
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 573 SDLSLSSKVVDLLSKDK--KYRECLNQFRH 600
S + S + L + K + RE +Q R
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 167/365 (45%), Gaps = 42/365 (11%)
Query: 56 KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
K G+I + A FF M +P + ++T +++ + LF + GL PD
Sbjct: 363 KRGDIRA--ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
LIN CK G AF V ++++ +PN VT+ LI+GLC EG + A L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAI-CKPDVVTYNSIIDGL 234
++ PN+ T+N+++NGLC++ N A+KL V EF A D VTY +++D
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----VGEFEAAGLNADTVTYTTLMDAY 536
Query: 235 CKDGFVDKAKELLLQMKDRN-----------------------------------INPNV 259
CK G +DKA+E+L +M + I PN
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
T+NSL+ +C ++ K A ++ +M GV PD T+ ++ +CK M + L +
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
M +G + TY+ L+ GF + ARE+F M +G D ++ + K ++
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Query: 380 VEDAV 384
+ V
Sbjct: 717 PDTIV 721
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 254/537 (47%), Gaps = 41/537 (7%)
Query: 50 FLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNS 109
LN + G + + VY M++ K P + ++ ++ K + ++
Sbjct: 189 LLNSLARFGLVDEMKQVYME--MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 110 NGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI-LRSCFTPNTVTFNFLINGLCAEGRIM 168
GL PD F LI C+ AF V + L+ C N V + LI+GLC RI
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC-RRNEVAYTHLIHGLCVARRID 305
Query: 169 EAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYN 228
EA LF K+ C P V T+ LI LC + AL L +EM E G KP++ TY
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-EETGI--KPNIHTYT 362
Query: 229 SIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFC------------------ 270
+ID LC +KA+ELL QM ++ + PNVITYN+LI G+C
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 271 ----------------CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
C + +A + +M++ V PDVVT+N++I+ C+ G D
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
RLL LM RG+ PD TY S++D C R+ A +LF S+ KG +V Y LI+
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
CK KV++A + +MLS+ P+ +T+N L+ GL G L +A L +KM + P
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
T I L K+G A FQ + + + TY I C+ GRL A + +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
++ G PD+ T S++I GQ + A D+L M C PS+ TF +L++ ++
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 256/516 (49%), Gaps = 29/516 (5%)
Query: 69 FDCMIKMKPS---PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINC 125
D +KMK P + ++T+L+ L +++ ++L K + G+ P++ +LI+
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 126 LCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPN 185
LC A +LG++L PN +T+N LING C G I +A + + + PN
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 186 VVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
T+N LI G C++ N A+ + +M+ PDVVTYNS+IDG C+ G D A
Sbjct: 428 TRTYNELIKGYCKS-NVHKAMGVLNKMLER---KVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 246 LLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNC 305
LL M DR + P+ TY S+I C +EA LF + GV P+VV + A+I+ C
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 306 KDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVY 365
K GK+D+ + +LE M+ + P+++T+N+L+ G C G++ A L MV G + V
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 366 SYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKM 425
+ ILI+ KD + A +++MLS +P TY T + + G L DA ++ KM
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Query: 426 QLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM--G 483
+ N V PD FT+++ I G G A V + +R+ CE T+ LI L +M G
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG 723
Query: 484 RLK----------------TACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
+ K T +L ++ P+ + +I +C+ G + A +
Sbjct: 724 KQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVF 783
Query: 528 LDMEAKNCV-PSEVTFCTLLR---GFVQNNKKSKVV 559
M+ + PSE+ F LL ++N+ +KVV
Sbjct: 784 DHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 252/523 (48%), Gaps = 45/523 (8%)
Query: 100 VVSLFKRLNSNGLFPDLFVL-----NLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTF 154
V+ L +++N + F + L N L+N L + G+ V +L PN T+
Sbjct: 162 VLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTY 221
Query: 155 NFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVN 214
N ++NG C G + EA + K+ DP+ T+ +LI G C+ ++ A K+F EM
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 215 EFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDD 274
+ C+ + V Y +I GLC +D+A +L ++MKD P V TY LI C +
Sbjct: 282 KG---CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 275 WKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNS 334
EA L EM + G++P++ T+ +I+ C K +K LL M+++G+ P+ +TYN+
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 335 LMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSER 394
L++G+C G I A ++ M S+ + +YN LI CK V A+ + +ML +
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERK 457
Query: 395 IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAV 454
+ P V+TYN+L+ G + GN A +L+ M +VPD +T+ + ID LCK+ V EA
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 455 QVFQAIRN-----------------CKC------ELRIE------------TYNCLINGL 479
+F ++ CK L +E T+N LI+GL
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 480 CKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
C G+LK A L ++ G P V T + +IH L K+G D A M + P
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVV 582
T+ T ++ + + + ++ KM E V DL S ++
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKM-RENGVSPDLFTYSSLI 679
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 227/449 (50%), Gaps = 40/449 (8%)
Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
+NTL+N L R +++ EM+ + +C P++ TYN +++G CK G V++A + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLED--KVC-PNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 249 QMKDRNINPNVITYNSLICGFCCVDDW--------------------------------- 275
++ + ++P+ TY SLI G+C D
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 276 --KEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYN 333
EA LF++M D+ P V T+ +I C + + L++ M + G+ P+ TY
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 334 SLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSE 393
L+D C + +AREL M+ KG +V +YN LIN CK +EDAV + M S
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 394 RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEA 453
++ P+ TYN L+ G + N+ A+ +++KM V+PD T+ + IDG C++G A
Sbjct: 423 KLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 454 VQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHW 513
++ + + TY +I+ LCK R++ AC LF L+ KG P+VV + +I
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 514 LCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVS 573
CK G++D+A+ +L M +KNC+P+ +TF L+ G + K + +L KM L +
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 574 DLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
+S + ++ L KD + ++F+ +L
Sbjct: 602 -VSTDTILIHRLLKDGDFDHAYSRFQQML 629
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 213/502 (42%), Gaps = 64/502 (12%)
Query: 41 FKDGTSIAKFLNDRHKSGNI-TSNE------------AVYFFDCMIKMKPSPGMTSFTIL 87
+D + + + R S N T NE A+ + M++ K P + ++ L
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 88 LTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCF 147
+ ++ +D+ L +N GL PD + +I+ LCK A + + +
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
PN V + LI+G C G++ EA + +K+ C PN +TFN LI+GLC A
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 208 LFEEMV--------------------------------NEFGAICKPDVVTYNSIIDGLC 235
L E+MV + KPD TY + I C
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
++G + A++++ +M++ ++P++ TY+SLI G+ + A + M D G +P
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 296 TFNAMINY--NCKDGKM----------------DKVNRLLELMIQRGVNPDTVTYNSLMD 337
TF ++I + K GK D V LLE M++ V P+ +Y L+
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Query: 338 GFCLVGRISRARELFVSMV-SKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
G C VG + A ++F M ++G +N L++ CK +K +A + +M+
Sbjct: 769 GICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL 828
Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
P + + L+ GL++ G + + D + IDG+ K G V ++
Sbjct: 829 PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888
Query: 457 FQAIRNCKCELRIETYNCLING 478
F + C+ +TY+ LI G
Sbjct: 889 FNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 242 bits (617), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 265/534 (49%), Gaps = 38/534 (7%)
Query: 77 PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMG------ 130
P+P + +F L+ K + D LFK + G+ PDL + LI+ K G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 131 -------------------------ITSG----AFVVLGRILRSCFTPNTVTFNFLINGL 161
+ SG A VV R+L +PN VT+ LI GL
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
C +GRI EA ++ ++ +P++VT+++LI+G C+ N L+E+M+ + G
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI-KMGY--P 458
Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
PDVV Y ++DGL K G + A ++M ++I NV+ +NSLI G+C ++ + EA +
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
F M G++PDV TF ++ + +G++++ L M + G+ PD + Y +L+D FC
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
+ + +LF M D+ N++I+ K ++EDA + ++ ++ P ++T
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
YNT++ G + L +A ++ + +++ P++ T I LCKN + A+++F +
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
+ TY CL++ K ++ + KLF +Q KG P +V+ S +I LCK G++D
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDL 575
+A ++ +P V + L+RG+ + + + +L M + DL
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 248/533 (46%), Gaps = 18/533 (3%)
Query: 83 SFTILLTMLAKNKQYDTVVSLFKRLNSN--------GLFPDLF----VLNLLINCLCKMG 130
SF + +L +N +D +F + +N G D V L+ C C+ G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160
Query: 131 ITSGAF-VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
+ A + + P + L N L R+ A F KL +P+ V+
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVSA 219
Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
+ + + + F +V E G + +V+ N ++ GL D ++ A LL
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERG--FRVGIVSCNKVLKGLSVDQ-IEVASRLLSL 276
Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
+ D PNV+T+ +LI GFC + A LF M G++PD++ ++ +I+ K G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
+ ++L + +GV D V ++S +D + G ++ A ++ M+ +G +V +Y I
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
LI C+D ++ +A +Y ++L + PS++TY++L+ G + GNL L + M
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
PD + +DGL K G +L A++ + L + +N LI+G C++ R A
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
K+F + G PDV T +T++ EG++++A L M P + +CTL+ F
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
++ K + + L M K + +D+++ + V+ LL K + + F +L+
Sbjct: 577 CKHMKPTIGLQLFDLMQRNK-ISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 173/374 (46%), Gaps = 34/374 (9%)
Query: 56 KSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPD 115
K GN+ S A+Y + MIKM P + + +L+ L+K + ++ + +
Sbjct: 438 KCGNLRSGFALY--EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 116 LFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFK 175
+ V N LI+ C++ A V + P+ TF ++ EGR+ EA LF
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 176 KLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM----VNEFGAIC----------- 220
++ +P+ + + TLI+ C+ + L+LF+ M ++ A+C
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 615
Query: 221 -----------------KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
+PD+VTYN++I G C +D+A+ + +K PN +T
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 675
Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
LI C +D A +F M + G +P+ VT+ ++++ K ++ +L E M ++
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735
Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
G++P V+Y+ ++DG C GR+ A +F + DV +Y ILI CK ++ +A
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 384 VCLYREMLSERIRP 397
LY ML ++P
Sbjct: 796 ALLYEHMLRNGVKP 809
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 3/273 (1%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
EA++ F M KM P ++ L+ K+ + + LF + N + D+ V N++
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I+ L K A ++ P+ VT+N +I G C+ R+ EA R+F+ L V
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
PN VT LI+ LC+ + A+++F M E G+ KP+ VTY ++D K ++
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EKGS--KPNAVTYGCLMDWFSKSVDIEG 724
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
+ +L +M+++ I+P++++Y+ +I G C EA +F + +D + PDVV + +I
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSL 335
CK G++ + L E M++ GV PD + +L
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 242 bits (617), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 261/506 (51%), Gaps = 10/506 (1%)
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
++ Y M K +P + ++ +L K ++ + L + S G+ D+ N+LI
Sbjct: 211 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 270
Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
+ LC+ + +++L + + PN VT+N LING EG+++ A++L ++ F
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330
Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
PN VTFN LI+G N ALK+F M + P V+Y ++DGLCK+ D A
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKG---LTPSEVSYGVLLDGLCKNAEFDLA 387
Query: 244 KELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINY 303
+ ++MK + ITY +I G C EA L EM +G+ PD+VT++A+IN
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
CK G+ ++ + + G++P+ + Y++L+ C +G + A ++ +M+ +G D
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALK--- 420
+++N+L+ + CK KV +A R M S+ I P+ ++++ L++G GN G+ LK
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING---YGNSGEGLKAFS 564
Query: 421 LIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLC 480
+ D+M P FT+ + + GLCK G + EA + +++ + YN L+ +C
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK-NCVPSE 539
K G L A LF + + +PD T +++I LC++G+ A + EA+ N +P++
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684
Query: 540 VTFCTLLRGFVQNNKKSKVVVLLHKM 565
V + + G + + + +M
Sbjct: 685 VMYTCFVDGMFKAGQWKAGIYFREQM 710
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/525 (27%), Positives = 263/525 (50%), Gaps = 3/525 (0%)
Query: 68 FFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLC 127
F M+K K P + +F IL+ +L ++ L +++ +G P + N +++ C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVV 187
K G A +L + + T+N LI+ LC RI + L + + PN V
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 188 TFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELL 247
T+NTLING L+A +L EM++ FG P+ VT+N++IDG +G +A ++
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLS-FG--LSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 248 LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKD 307
M+ + + P+ ++Y L+ G C ++ A+ ++ M NGV +T+ MI+ CK+
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 308 GKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSY 367
G +D+ LL M + G++PD VTY++L++GFC VGR A+E+ + G + Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476
Query: 368 NILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
+ LI C+ +++A+ +Y M+ E T+N L++ L + G + +A + + M
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
+ ++P++ +F I+G +G L+A VF + TY L+ GLCK G L+
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596
Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
A K L D V +T++ +CK G + KA L +M ++ +P T+ +L+
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656
Query: 548 GFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYR 592
G + K ++ + A V+ + + + VD + K +++
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 701
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 246/541 (45%), Gaps = 38/541 (7%)
Query: 84 FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
+ IL+ + + + +F+ + G P ++ N ++ + K G + L +L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
+ P+ TFN LIN LCAEG +++ L +K+ P +VT+NT+++ C+
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
A++L + M ++ DV TYN +I LC+ + K LL M+ R I+PN +TYN
Sbjct: 246 AAIELLDHMKSKG---VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
+LI GF A L EM+ G+ P+ VTFNA+I+ + +G + ++ +M +
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 362
Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
G+ P V+Y L+DG C AR ++ M G +Y +I+ CK+ +++A
Sbjct: 363 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422
Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGN----------------------------- 414
V L EM + I P ++TY+ L++G +VG
Sbjct: 423 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 482
Query: 415 ------LGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELR 468
L +A+++ + M L D FTF + LCK G V EA + + + +
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 542
Query: 469 IETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLL 528
+++CLING G A +F + G P T +++ LCK G + +A L
Sbjct: 543 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 602
Query: 529 DMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKD 588
+ A V + TLL ++ +K V L +M ++ + +S + L K
Sbjct: 603 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Query: 589 K 589
K
Sbjct: 663 K 663
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 230/447 (51%), Gaps = 4/447 (0%)
Query: 130 GITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTF 189
G +S F L R C N ++ LI EG I ++ +F+ + ++ +P+V T
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161
Query: 190 NTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQ 249
N ++ + ++ + +EM+ IC PDV T+N +I+ LC +G +K+ L+ +
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKR--KIC-PDVATFNILINVLCAEGSFEKSSYLMQK 218
Query: 250 MKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGK 309
M+ P ++TYN+++ +C +K A L M GV DV T+N +I+ C+ +
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 278
Query: 310 MDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNI 369
+ K LL M +R ++P+ VTYN+L++GF G++ A +L M+S G + ++N
Sbjct: 279 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 338
Query: 370 LINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLND 429
LI+ + + ++A+ ++ M ++ + PS ++Y LL GL + A +M+ N
Sbjct: 339 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398
Query: 430 VVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTAC 489
V T+ IDGLCKNGF+ EAV + + + I TY+ LING CK+GR KTA
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 458
Query: 490 KLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGF 549
++ R+ G P+ + ST+I+ C+ G + +A + M + TF L+
Sbjct: 459 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 518
Query: 550 VQNNKKSKVVVLLHKMAAEKLVVSDLS 576
+ K ++ + M ++ ++ + +S
Sbjct: 519 CKAGKVAEAEEFMRCMTSDGILPNTVS 545
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/575 (25%), Positives = 257/575 (44%), Gaps = 21/575 (3%)
Query: 21 NFWCSFGRPPNPKTDLSSHHFKDGTSIAKFLNDRHKS-GNITSNEAVYFFDCMIKMKPSP 79
N SFG PN T L D H S GN EA+ F M +P
Sbjct: 322 NEMLSFGLSPNHVT-------------FNALIDGHISEGNF--KEALKMFYMMEAKGLTP 366
Query: 80 GMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVL 139
S+ +LL L KN ++D + R+ NG+ +I+ LCK G A V+L
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 140 GRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRT 199
+ + P+ VT++ LING C GR A + ++ PN + ++TLI CR
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486
Query: 200 RNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNV 259
A++++E M+ E D T+N ++ LCK G V +A+E + M I PN
Sbjct: 487 GCLKEAIRIYEAMILEGHT---RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 260 ITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
++++ LI G+ + +A +F EM G P T+ +++ CK G + + + L+
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
+ DTV YN+L+ C G +++A LF MV + D Y+Y LI+ C+ K
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Query: 380 VEDAVCLYREMLSE-RIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
A+ +E + + P+ + Y + G+F+ G + ++M PD T
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723
Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
IDG + G + + + + N + TYN L++G K + T+ L+ +
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783
Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKV 558
G +PD +TC +++ +C+ ++ +L + TF L+ N + +
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843
Query: 559 VVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRE 593
L+ M + + + D +V +L+++ +++E
Sbjct: 844 FDLVKVMTSLGISL-DKDTCDAMVSVLNRNHRFQE 877
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 230/469 (49%), Gaps = 8/469 (1%)
Query: 97 YDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNF 156
+ +++ ++ NSN P ++ ++LI + G+ + + + F P+ T N
Sbjct: 109 FGALMTTYRLCNSN---PSVY--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNA 163
Query: 157 LINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEF 216
++ + G + K++ P+V TFN LIN LC + + L ++M
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG 223
Query: 217 GAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWK 276
A P +VTYN+++ CK G A ELL MK + ++ +V TYN LI C +
Sbjct: 224 YA---PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280
Query: 277 EAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLM 336
+ L +M + P+ VT+N +IN +GK+ ++LL M+ G++P+ VT+N+L+
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Query: 337 DGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIR 396
DG G A ++F M +KG SY +L++ CK+ + + A Y M +
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400
Query: 397 PSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
ITY ++ GL + G L +A+ L+++M + + PD T++ I+G CK G A ++
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 457 FQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
I Y+ LI C+MG LK A +++ + +G D T + ++ LCK
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520
Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
G++ +A + + M + +P+ V+F L+ G+ + + K + +M
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 247/553 (44%), Gaps = 39/553 (7%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
+EAV + M K P + +++ L+ K ++ T + R+ GL P+ + + L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I C+MG A + ++ T + TFN L+ LC G++ EA + +
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
PN V+F+ LING + L A +F+EM + G P TY S++ GLCK G + +
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMT-KVGH--HPTFFTYGSLLKGLCKGGHLRE 596
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
A++ L + + + YN+L+ C + +A LF EM+ + PD T+ ++I+
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656
Query: 303 YNCKDGK------------------------------MDKVNR------LLELMIQRGVN 326
C+ GK M K + E M G
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 716
Query: 327 PDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCL 386
PD VT N+++DG+ +G+I + +L M ++ ++ +YNIL++ K + V + L
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
YR ++ I P +T ++L+ G+ + L LK++ V D +TF I C
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 447 NGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVT 506
NG + A + + + + L +T + +++ L + R + + + H + +G P+
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 896
Query: 507 CSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
+I+ LC+ G + A + +M A P V ++R + K + +LL M
Sbjct: 897 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956
Query: 567 AEKLVVSDLSLSS 579
KLV + S ++
Sbjct: 957 KMKLVPTIASFTT 969
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 142/544 (26%), Positives = 247/544 (45%), Gaps = 54/544 (9%)
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
+A FD M K+ P ++ LL L K K L++ D + N L+
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620
Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA-C 182
+CK G + A + G +++ P++ T+ LI+GLC +G+ + A K+
Sbjct: 621 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
PN V + ++G+ + + F E ++ G PD+VT N++IDG + G ++K
Sbjct: 681 LPNKVMYTCFVDGMFKAGQWKAGI-YFREQMDNLGHT--PDIVTTNAMIDGYSRMGKIEK 737
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
+LL +M ++N PN+ TYN L+ G+ D + L+ ++ NG+ PD +T ++++
Sbjct: 738 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 797
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR- 361
C+ ++ ++L+ I RGV D T+N L+ C G I+ A +L M S G
Sbjct: 798 GICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL 857
Query: 362 -------------------------HDVYSYNI---------LINANCKDQKVEDAVCLY 387
H++ I LIN C+ ++ A +
Sbjct: 858 DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 917
Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
EM++ +I P + + ++ L + G +A L+ M +VP +F T + CKN
Sbjct: 918 EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 977
Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
G V+EA+++ + NC +L + +YN LI GLC G + A +L+ ++ G + + T
Sbjct: 978 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1037
Query: 508 STMIH-WLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMA 566
+I L +E A+ +L D+ L RGF+ + S+ KMA
Sbjct: 1038 KALIRGLLARETAFSGADIILKDL--------------LARGFITSMSLSQDSHRNLKMA 1083
Query: 567 AEKL 570
EKL
Sbjct: 1084 MEKL 1087
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 142/566 (25%), Positives = 247/566 (43%), Gaps = 43/566 (7%)
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
EA+ ++ MI + +F +L+T L K + + + S+G+ P+ + LI
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
N G AF V + + P T+ L+ GLC G + EA + K L+
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610
Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
+ V +NTL+ +C++ N A+ LF EMV PD TY S+I GLC+ G A
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS---ILPDSYTYTSLISGLCRKGKTVIA 667
Query: 244 KELLLQMKDR-NINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDN-GVQPDVVTFNAMI 301
+ + R N+ PN + Y + G WK A F E MDN G PD+VT NAMI
Sbjct: 668 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK-AGIYFREQMDNLGHTPDIVTTNAMI 726
Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG-- 359
+ + GK++K N LL M + P+ TYN L+ G+ +S + L+ S++ G
Sbjct: 727 DGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 786
Query: 360 ------------------------------CRH---DVYSYNILINANCKDQKVEDAVCL 386
CR D Y++N+LI+ C + ++ A L
Sbjct: 787 PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Query: 387 YREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCK 446
+ M S I T + ++S L + ++ ++ +M + P+S + I+GLC+
Sbjct: 847 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 906
Query: 447 NGFVLEAVQVFQAIRNCK-CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVV 505
G + A V + + K C + + ++ L K G+ A L + +P +
Sbjct: 907 VGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965
Query: 506 TCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
+ +T++H CK G + +A +L + M V++ L+ G + L +M
Sbjct: 966 SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025
Query: 566 AAEKLVVSDLSLSSKVVDLLSKDKKY 591
+ + + + + + LL+++ +
Sbjct: 1026 KGDGFLANATTYKALIRGLLARETAF 1051
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%)
Query: 62 SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
++EA M+KMK P + SFT L+ + KN + L +++ GL DL N+
Sbjct: 945 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004
Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKK 176
LI LC G + AF + + F N T+ LI GL A A + K
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 240/486 (49%), Gaps = 3/486 (0%)
Query: 84 FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
F +L+ + ++ F L S G + N LI L ++G A+ V I
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 144 RSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTL 203
RS N T N ++N LC +G++ + ++ P++VT+NTLI+
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 204 VALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYN 263
A +L M G P V TYN++I+GLCK G ++AKE+ +M ++P+ TY
Sbjct: 288 EAFELMNAMP---GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 264 SLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQR 323
SL+ C D E + +F +M V PD+V F++M++ + G +DK + +
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 324 GVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDA 383
G+ PD V Y L+ G+C G IS A L M+ +GC DV +YN +++ CK + + +A
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 384 VCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDG 443
L+ EM + P T L+ G ++GNL +A++L KM+ + D T+ T +DG
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 444 LCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPD 503
K G + A +++ + + + +Y+ L+N LC G L A +++ + K P
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 504 VVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLH 563
V+ C++MI C+ G L M ++ VP +++ TL+ GFV+ SK L+
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 564 KMAAEK 569
KM E+
Sbjct: 645 KMEEEQ 650
Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 246/466 (52%), Gaps = 5/466 (1%)
Query: 102 SLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
+++ ++ +G+ +++ LN+++N LCK G L ++ P+ VT+N LI+
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
++G + EA L + P V T+NT+INGLC+ A ++F EM+ +
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR---SGLS 337
Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
PD TY S++ CK G V + +++ M+ R++ P+++ ++S++ F + +A
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
F + + G+ PD V + +I C+ G + L M+Q+G D VTYN+++ G C
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
+ A +LF M + D Y+ ILI+ +CK +++A+ L+++M +RIR V+T
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517
Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
YNTLL G +VG++ A ++ M +++P +++ ++ LC G + EA +V+ +
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
+ + + N +I G C+ G ++ +G +PD ++ +T+I+ +E M
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS 637
Query: 522 KANDLLLDMEAKN--CVPSEVTFCTLLRGFVQNNKKSKVVVLLHKM 565
KA L+ ME + VP T+ ++L GF + N+ + V+L KM
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 153/555 (27%), Positives = 273/555 (49%), Gaps = 24/555 (4%)
Query: 18 YRCNFWCSFGRPPNPKTDLSSHHFKDGT-SIAKFLNDRHKSGNITSNEAVYFFDCMIKMK 76
YRC + G+ + +FK + S++ ++ +SG ++ ++ C+++M
Sbjct: 86 YRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQS-----CLLRMI 140
Query: 77 PSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAF 136
G++ I+ +++ S F SN V +LLI + A
Sbjct: 141 RRSGVSRLEIV----------NSLDSTFSNCGSND-----SVFDLLIRTYVQARKLREAH 185
Query: 137 VVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGL 196
+ FT + N LI L G + A ++++++ NV T N ++N L
Sbjct: 186 EAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNAL 245
Query: 197 CRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNIN 256
C+ + + F V E G PD+VTYN++I G +++A EL+ M + +
Sbjct: 246 CKD-GKMEKVGTFLSQVQEKGVY--PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 302
Query: 257 PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL 316
P V TYN++I G C ++ AK +F EM+ +G+ PD T+ +++ CK G + + ++
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362
Query: 317 LELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCK 376
M R V PD V ++S+M F G + +A F S+ G D Y ILI C+
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 377 DQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFT 436
+ A+ L EML + V+TYNT+L GL + LG+A KL ++M + PDS+T
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 437 FATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQ 496
IDG CK G + A+++FQ ++ + L + TYN L++G K+G + TA +++ +
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKS 556
K +P ++ S +++ LC +G + +A + +M +KN P+ + ++++G+ ++ S
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 557 KVVVLLHKMAAEKLV 571
L KM +E V
Sbjct: 603 DGESFLEKMISEGFV 617
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 233/463 (50%), Gaps = 5/463 (1%)
Query: 79 PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
P + ++ L++ + + L + G P ++ N +IN LCK G A V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
+LRS +P++ T+ L+ C +G ++E ++F + P++V F+++++ R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
+ N AL F V E G I PD V Y +I G C+ G + A L +M + +
Sbjct: 388 SGNLDKALMYFNS-VKEAGLI--PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
V+TYN+++ G C EA LF EM + + PD T +I+ +CK G + L +
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
M ++ + D VTYN+L+DGF VG I A+E++ MVSK SY+IL+NA C
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
+ +A ++ EM+S+ I+P+V+ N+++ G + GN D ++KM VPD ++
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCEL--RIETYNCLINGLCKMGRLKTACKLFHRLQ 496
T I G + + +A + + + + L + TYN +++G C+ ++K A + ++
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 497 HKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSE 539
+G PD T + MI+ + + +A + +M + P +
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 198/393 (50%), Gaps = 7/393 (1%)
Query: 43 DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
D T+ L + K G++ E V F M P + F+ ++++ ++ D +
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKV--FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 103 LFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC 162
F + GL PD + +LI C+ G+ S A + +L+ + VT+N +++GLC
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Query: 163 AEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKP 222
+ EA +LF ++ A P+ T LI+G C+ N A++LF++M + +
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR---IRL 513
Query: 223 DVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLF 282
DVVTYN+++DG K G +D AKE+ M + I P I+Y+ L+ C EA ++
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 283 IEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLV 342
EM+ ++P V+ N+MI C+ G LE MI G PD ++YN+L+ GF
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 343 GRISRARELFVSMVSK--GCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
+S+A L M + G DV++YN +++ C+ ++++A + R+M+ + P
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693
Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
TY +++G NL +A ++ D+M PD
Sbjct: 694 TYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 191/390 (48%), Gaps = 5/390 (1%)
Query: 69 FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCK 128
F M++ SP T++ LL K +F + S + PDL + +++ +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 129 MGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVT 188
G A + + + P+ V + LI G C +G I A L ++ C +VVT
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 189 FNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLL 248
+NT+++GLC+ + A KLF EM PD T +IDG CK G + A EL
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTER---ALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 249 QMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDG 308
+MK++ I +V+TYN+L+ GF V D AK ++ +M+ + P ++++ ++N C G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 309 KMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYN 368
+ + R+ + MI + + P + NS++ G+C G S M+S+G D SYN
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 369 ILINANCKDQKVEDAVCLYREMLSER--IRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ 426
LI +++ + A L ++M E+ + P V TYN++L G + + +A ++ KM
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 427 LNDVVPDSFTFATYIDGLCKNGFVLEAVQV 456
V PD T+ I+G + EA ++
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Query: 41 FKDGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTV 100
F D ++ ++ K GN+ + A+ F M + + + ++ LL K DT
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQN--AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 101 VSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLING 160
++ + S + P ++L+N LC G + AF V ++ P + N +I G
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 161 LCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAIC 220
C G + +K+ P+ +++NTLI G R N A L ++M E G +
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 221 KPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKC 280
PDV TYNSI+ G C+ + +A+ +L +M +R +NP+ TY +I GF D+ EA
Sbjct: 655 -PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 281 LFIEMMDNGVQPD 293
+ EM+ G PD
Sbjct: 714 IHDEMLQRGFSPD 726
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 259/503 (51%), Gaps = 3/503 (0%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
+EA F + P S T+LL L K KQ+ +++F + + P F+
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I K+ + R+ P+ +N LI+GLC R+ +A +LF ++
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
P+++T+NTLI+G C+ N + K+ E M + +P ++T+N+++ GL K G V+
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH---IEPSLITFNTLLKGLFKAGMVED 302
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
A+ +L +MKD P+ T++ L G+ + + A ++ +D+GV+ + T + ++N
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
CK+GK++K +L + +G+ P+ V YN+++DG+C G + AR +M +G +
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
D +YN LI C+ ++E+A +M + + PSV TYN L+ G + ++
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482
Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
+M+ N +P+ ++ T I+ LCK +LEA V + + + ++ YN LI+G C
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542
Query: 483 GRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTF 542
G+++ A + + KG ++VT +T+I L G++ +A DLLL++ K P T+
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 543 CTLLRGFVQNNKKSKVVVLLHKM 565
+L+ G+ + + L +M
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEM 625
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 258/543 (47%), Gaps = 42/543 (7%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
+ + F+ M + P + + +L+ L K K+ + LF + + L P L N L
Sbjct: 196 GKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I+ CK G +F V R+ P+ +TFN L+ GL G + +A + K++
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
P+ TF+ L +G AL ++E V+ + K + T + +++ LCK+G ++K
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVD---SGVKMNAYTCSILLNALCKEGKIEK 372
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
A+E+L + + + PN + YN++I G+C D A+ M G++PD + +N +I
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGF----------------------- 339
C+ G+M+ + + M +GV+P TYN L+ G+
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 340 ------------CLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
C ++ A+ + M +G V YN+LI+ C K+EDA
Sbjct: 493 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS 552
Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
+EML + I +++TYNTL+ GL G L +A L+ ++ + PD FT+ + I G
Sbjct: 553 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
G V + +++ ++ + ++TY+ LI+ LC ++ +LF + K PD++
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLK---PDLLVY 668
Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
+ ++H G M+KA +L M K+ + T+ +L+ G ++ K +V L+ +M A
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNA 728
Query: 568 EKL 570
++
Sbjct: 729 REM 731
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 224/455 (49%), Gaps = 9/455 (1%)
Query: 81 MTSFT--ILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
M ++T ILL L K + + + R + GL P+ + N +I+ C+ G GA +
Sbjct: 352 MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMK 411
Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
+ + + P+ + +N LI C G + A + K+ + P+V T+N LI G R
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
+ +EM + G + P+VV+Y ++I+ LCK + +A+ + M+DR ++P
Sbjct: 472 KYEFDKCFDILKEMEDN-GTM--PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528
Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
V YN LI G C ++A EM+ G++ ++VT+N +I+ GK+ + LL
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQ 378
+ ++G+ PD TYNSL+ G+ G + R L+ M G + + +Y++LI+ C +
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-CTKE 647
Query: 379 KVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFA 438
+E L+ EM ++P ++ YN +L G++ A L +M + D T+
Sbjct: 648 GIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Query: 439 TYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHK 498
+ I G K G + E + + + E +TYN ++ G C++ +A + +Q K
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Query: 499 GPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
G + DV + ++ L +E + +A ++ +M +
Sbjct: 765 GFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 180/365 (49%), Gaps = 10/365 (2%)
Query: 78 SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
SP + ++ IL+ + ++D + K + NG P++ LINCLCK A +
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
V + +P +N LI+G C++G+I +A R K++ + N+VT+NTLI+GL
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
T A L E+ + KPDV TYNS+I G G V + L +MK I P
Sbjct: 576 MTGKLSEAEDLLLEISRKG---LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
+ TY+ LI C + + + LF EM ++PD++ +N +++ G M+K L
Sbjct: 633 TLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
+ MI++ + D TYNSL+ G VG++ R L M ++ + +YNI++ +C+
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQ---LNDVVPDS 434
+ A YREM + V N L+SGL + +A +I +M L DV D
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTVDE 808
Query: 435 FTFAT 439
AT
Sbjct: 809 DLSAT 813
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 127/246 (51%), Gaps = 1/246 (0%)
Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
IS A +LF ++ ++G S +L++ K ++ + ++ +L RPS Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
+ ++ ++G L+L ++M+ + + P F + IDGLCK + +A Q+F + +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
+ TYN LI+G CK G + + K+ R++ P ++T +T++ L K G ++ A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
++L +M+ VP TF L G+ +N+K++ + +++ A + V + S +++
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGY-SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 585 LSKDKK 590
L K+ K
Sbjct: 364 LCKEGK 369
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Query: 346 SRARELF--VSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYN 403
+ +ELF S+ S +HD +SY +L + + + +A L+ + +E I PS +
Sbjct: 90 ASPKELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLT 148
Query: 404 TLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNC 463
LL L + + + + +D P F + I K V + +++F +++
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 208
Query: 464 KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKA 523
+ + YN LI+GLCK R+ A +LF + + +P ++T +T+I CK G +K+
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 524 NDLLLDMEAKNCVPSEVTFCTLLRGFVQ 551
+ M+A + PS +TF TLL+G +
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFK 296
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 232 bits (591), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 148/542 (27%), Positives = 253/542 (46%), Gaps = 59/542 (10%)
Query: 67 YFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCL 126
+ + M+ +P +F +L+ L + D LF + G P+ F +L+
Sbjct: 133 WLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY 192
Query: 127 CKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNV 186
CK G+T +L + PN V +N +++ C EGR ++ ++ +K+ P++
Sbjct: 193 CKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDI 252
Query: 187 VTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKE 245
VTFN+ I+ LC+ L A ++F +M ++E+ + +P+ +TYN ++ G CK G ++ AK
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312
Query: 246 L-----------------------------------LLQMKDRNINPNVITYNSLICGFC 270
L L QM D+ I P++ +YN L+ G C
Sbjct: 313 LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372
Query: 271 CVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTV 330
+ +AK + M NGV PD VT+ +++ C GK+D LL+ M++ P+
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432
Query: 331 TYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREM 390
T N L+ +GRIS A EL M KG D + NI+++ C +++ A+ + + M
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Query: 391 -----------------------LSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQL 427
+ P +ITY+TLL+GL + G +A L +M
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552
Query: 428 NDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKT 487
+ PDS + +I CK G + A +V + + C +ETYN LI GL ++
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612
Query: 488 ACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLR 547
L ++ KG P++ T +T I +LC+ +++ A +LL +M KN P+ +F L+
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672
Query: 548 GF 549
F
Sbjct: 673 AF 674
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 262/553 (47%), Gaps = 35/553 (6%)
Query: 79 PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
P + + +LL K ++ + V L+K + G+ P + NLLI LC A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
+ PN TF L+ G C G + L + F PN V +NT+++ CR
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMK-DRNIN- 256
+ K+ E+M E G + PD+VT+NS I LCK+G V A + M+ D +
Sbjct: 230 EGRNDDSEKMVEKMREE-GLV--PDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 257 --PNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVN 314
PN ITYN ++ GFC V ++AK LF + +N + ++N + + GK +
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 315 RLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINAN 374
+L+ M +G+ P +YN LMDG C +G +S A+ + M G D +Y L++
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Query: 375 CKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDS 434
C KV+ A L +EM+ P+ T N LL L+++G + +A +L+ KM D+
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDT 466
Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIR-------------------------NCKCELRI 469
T +DGLC +G + +A+++ + +R NC +L
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI- 525
Query: 470 ETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLD 529
TY+ L+NGLCK GR A LF + + PD V + IH CK+G++ A +L D
Sbjct: 526 -TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 530 MEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDK 589
ME K C S T+ +L+ G N+ ++ L+ +M EK + ++ + + L + +
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM-KEKGISPNICTYNTAIQYLCEGE 643
Query: 590 KYRECLNQFRHLL 602
K + N ++
Sbjct: 644 KVEDATNLLDEMM 656
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 233/460 (50%), Gaps = 33/460 (7%)
Query: 141 RILRSCFT---PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
+++RS F P+ +N L+ E R+ + L+K + + P TFN LI LC
Sbjct: 99 QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALC 158
Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
+ A +LF+EM + CKP+ T+ ++ G CK G DK ELL M+ + P
Sbjct: 159 DSSCVDAARELFDEMPEKG---CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLP 215
Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRL- 316
N + YN+++ FC +++ + +M + G+ PD+VTFN+ I+ CK+GK+ +R+
Sbjct: 216 NKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIF 275
Query: 317 --LELMIQRGV-NPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINA 373
+EL G+ P+++TYN ++ GFC VG + A+ LF S+ + SYNI +
Sbjct: 276 SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQG 335
Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
+ K +A + ++M + I PS+ +YN L+ GL ++G L DA ++ M+ N V PD
Sbjct: 336 LVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPD 395
Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
+ T+ + G C G V A + Q + C T N L++ L KMGR+ A +L
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK-------------------- 533
++ KG D VTC+ ++ LC G++DKA +++ M
Sbjct: 456 KMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSL 515
Query: 534 ---NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
NC+P +T+ TLL G + + ++ L +M EKL
Sbjct: 516 IENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 250/503 (49%), Gaps = 30/503 (5%)
Query: 64 EAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLI 123
+A F+ + + + S+ I L L ++ ++ ++ K++ G+ P ++ N+L+
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 124 NCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACD 183
+ LCK+G+ S A ++G + R+ P+ VT+ L++G C+ G++ A L +++ C
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL 428
Query: 184 PNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKA 243
PN T N L++ L + A +L +M NE G D VT N I+DGLC G +DKA
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKM-NEKGYGL--DTVTCNIIVDGLCGSGELDKA 485
Query: 244 KELLLQMK-----------------------DRNINPNVITYNSLICGFCCVDDWKEAKC 280
E++ M+ + N P++ITY++L+ G C + EAK
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 281 LFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFC 340
LF EMM +QPD V +N I++ CK GK+ R+L+ M ++G + TYNSL+ G
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Query: 341 LVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVI 400
+ +I L M KG ++ +YN I C+ +KVEDA L EM+ + I P+V
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665
Query: 401 TYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAI 460
++ L+ +V + D + + + ++ ++ + L G +L+A ++ +A+
Sbjct: 666 SFKYLIEAFCKVPDF-DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAV 724
Query: 461 RNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQM 520
+ EL Y L+ LCK L+ A + H++ +G D +I L K G
Sbjct: 725 LDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNK 784
Query: 521 DKAN---DLLLDMEAKNCVPSEV 540
+AN D +++M + V ++V
Sbjct: 785 KEANSFADKMMEMASVGEVANKV 807
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 139/323 (43%), Gaps = 13/323 (4%)
Query: 58 GNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLF 117
GN+ ++ D +I+ P + +++ LL L K ++ +LF + L PD
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV 560
Query: 118 VLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKL 177
N+ I+ CK G S AF VL + + + T+N LI GL + +I E L ++
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620
Query: 178 NVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKD 237
PN+ T+NT I LC A L +EM+ + A P+V ++ +I+ CK
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA---PNVFSFKYLIEAFCKV 677
Query: 238 GFVDKAKELL---LQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDV 294
D A+E+ + + + + +N L+ + +A L ++D G +
Sbjct: 678 PDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLL----KATELLEAVLDRGFELGT 733
Query: 295 VTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVS 354
+ ++ CK +++ + +L MI RG D ++DG +G A
Sbjct: 734 FLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADK 793
Query: 355 MVSKGCRHDVYSYNILINANCKD 377
M+ +V + ++ N +D
Sbjct: 794 MMEMASVGEVANK---VDPNARD 813
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 250/489 (51%), Gaps = 5/489 (1%)
Query: 65 AVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLIN 124
A+ FD M K PSP +F++L+ KN + + + +K++ GL P +F ++ +I
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 125 CLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDP 184
K A + + N N +++ LC +G+ EA L K+ P
Sbjct: 418 GWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
NVV++N ++ G CR +N +A +F ++ E G KP+ TY+ +IDG ++ A
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNIL-EKG--LKPNNYTYSILIDGCFRNHDEQNAL 533
Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNG-VQPDVVTFNAMINY 303
E++ M NI N + Y ++I G C V +A+ L M++ + +++N++I+
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDG 593
Query: 304 NCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHD 363
K+G+MD E M G++P+ +TY SLM+G C R+ +A E+ M +KG + D
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Query: 364 VYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLID 423
+ +Y LI+ CK +E A L+ E+L E + PS YN+L+SG +GN+ AL L
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 424 KMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMG 483
KM + + D T+ T IDGL K+G ++ A +++ ++ Y ++NGL K G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 484 RLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFC 543
+ K+F ++ P+V+ + +I +EG +D+A L +M K +P TF
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 833
Query: 544 TLLRGFVQN 552
L+ G V N
Sbjct: 834 ILVSGQVGN 842
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 249/492 (50%), Gaps = 13/492 (2%)
Query: 79 PGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVV 138
P ++T ++ K D + L + S+G+ ++ LI CK A V+
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 139 LGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCR 198
++ + +PN+VTF+ LI G + +A +KK+ V P+V +T+I G +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 199 TRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPN 258
+ ALKLF+E E G +V N+I+ LCK G D+A ELL +M+ R I PN
Sbjct: 422 GQKHEEALKLFDESF-ETGL---ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 259 VITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLE 318
V++YN+++ G C + A+ +F +++ G++P+ T++ +I+ ++ ++
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 319 LMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSK-----GCRHDVYSYNILINA 373
M + + V Y ++++G C VG+ S+AREL +M+ + C SYN +I+
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC----MSYNSIIDG 593
Query: 374 NCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPD 433
K+ +++ AV Y EM I P+VITY +L++GL + + AL++ D+M+ V D
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Query: 434 SFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFH 493
+ IDG CK + A +F + YN LI+G +G + A L+
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 494 RLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNN 553
++ G D+ T +T+I L K+G + A++L +M+A VP E+ + ++ G +
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 554 KKSKVVVLLHKM 565
+ KVV + +M
Sbjct: 774 QFVKVVKMFEEM 785
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 238/523 (45%), Gaps = 37/523 (7%)
Query: 83 SFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRI 142
+F LL +K++Q D V + ++ + P +N ++ L + + A + R+
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224
Query: 143 LRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNT 202
+ + VT L+ E + EA + + +P+ + ++ + C+T +
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284
Query: 203 LVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITY 262
+A L EM + +C P TY S+I K G +D A L +M I+ NV+
Sbjct: 285 AMANSLLREMKEK--KLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAA 342
Query: 263 NSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQ 322
SLI G C +D A LF +M G P+ VTF+ +I + K+G+M+K + M
Sbjct: 343 TSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV 402
Query: 323 RGVNPDTVTYNSLMDGF----------------------------------CLVGRISRA 348
G+ P ++++ G+ C G+ A
Sbjct: 403 LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEA 462
Query: 349 RELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSG 408
EL M S+G +V SYN ++ +C+ + ++ A ++ +L + ++P+ TY+ L+ G
Sbjct: 463 TELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
Query: 409 LFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF-QAIRNCKCEL 467
F+ + +AL++++ M +++ + + T I+GLCK G +A ++ I + +
Sbjct: 523 CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCV 582
Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
+YN +I+G K G + +A + + G P+V+T +++++ LCK +MD+A ++
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKL 570
+M+ K + L+ GF + + L ++ E L
Sbjct: 643 DEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 109/286 (38%), Gaps = 71/286 (24%)
Query: 350 ELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGL 409
+L S S G + ++N L+NA KD++ + AV + +ML + P N LS L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 410 FQVGNLGDALKLIDKM------------QL-----------------------NDVVPDS 434
Q +L +A +L +M QL PDS
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 435 FTFATYIDGLCKNGFVLEAVQVFQAIRNCK-CELRIETYNCLI----------------- 476
++ + CK + A + + ++ K C ETY +I
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 477 ------------------NGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEG 518
G CK L +A LF +++ +GP P+ VT S +I W K G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388
Query: 519 QMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
+M+KA + ME PS T+++G+++ K + + L +
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 434
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/532 (27%), Positives = 268/532 (50%), Gaps = 37/532 (6%)
Query: 78 SPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFV 137
P + S+ LL + KQ+ V SLF + G+ P+L N+LI CK A
Sbjct: 111 EPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170
Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
L + + F P+ +++ +IN L G++ +A LF +++ P+V +N LI+G
Sbjct: 171 FLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
Query: 198 RTRNTLVALKLFEEMVNE-------------FGAICK--------------------PDV 224
+ ++ A++L++ ++ + + K D+
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL 290
Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
TY+S+I GLC G VDKA+ + ++ +R + +V+TYN+++ GFC KE+ L+
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-R 349
Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
+M++ ++V++N +I ++GK+D+ + LM +G D TY + G C+ G
Sbjct: 350 IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
+++A + + S G DVY+Y +I+ CK +++E+A L +EM + + N
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
L+ GL + LG+A + +M N P ++ I GLCK G EA + +
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
+ ++TY+ L+ GLC+ ++ A +L+H+ G DV+ + +IH LC G++D A
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQ---NNKKSKVVVLLHKMAAEKLVVS 573
++ +ME +NC + VT+ TL+ GF + +N+ + + ++KM + ++S
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIIS 641
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 248/509 (48%), Gaps = 7/509 (1%)
Query: 43 DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVS 102
D S + +ND K+G + ++A+ FD M + +P +T + IL+ K K + T +
Sbjct: 183 DVFSYSTVINDLAKAGKL--DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME 240
Query: 103 LFKRL-NSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGL 161
L+ RL + ++P++ N++I+ L K G + R+ ++ + T++ LI+GL
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300
Query: 162 CAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICK 221
C G + +A +F +L+ +VVT+NT++ G CR +L+L+ M ++
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV--- 357
Query: 222 PDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCL 281
++V+YN +I GL ++G +D+A + M + + TY I G C +A +
Sbjct: 358 -NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 282 FIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
E+ +G DV + ++I+ CK ++++ + L++ M + GV ++ N+L+ G
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
R+ A M GCR V SYNILI CK K +A +EML +P + T
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
Y+ LL GL + + AL+L + + + D I GLC G + +A+ V +
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
+ C + TYN L+ G K+G A ++ + G PD+++ +T++ LC +
Sbjct: 597 HRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVS 656
Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFV 550
A + D P+ T+ L+R V
Sbjct: 657 YAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 223/455 (49%), Gaps = 6/455 (1%)
Query: 149 PNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKL 208
P ++N L+N + ++ LF PN+ T+N LI C+ + A
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 209 FEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICG 268
+ M E KPDV +Y+++I+ L K G +D A EL +M +R + P+V YN LI G
Sbjct: 172 LDWMWKEG---FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 269 FCCVDDWKEAKCLFIEMM-DNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
F D K A L+ ++ D+ V P+V T N MI+ K G++D ++ E M Q
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
D TY+SL+ G C G + +A +F + + DV +YN ++ C+ K+++++ L+
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
R ++ + ++++YN L+ GL + G + +A + M D T+ +I GLC N
Sbjct: 349 R-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
G+V +A+ V Q + + L + Y +I+ LCK RL+ A L + G + C
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAA 567
+ +I L ++ ++ +A+ L +M C P+ V++ L+ G + K + + +M
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM-L 526
Query: 568 EKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHLL 602
E DL S ++ L +D+K L + L
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 230/485 (47%), Gaps = 16/485 (3%)
Query: 87 LLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLCKMGITSGAFVVLGRILRS 145
++ KN D + +FKR+ G P + N L+N + + +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 146 CFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVA 205
PN T+N LI C + +A + P+V +++T+IN L + A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 206 LKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQM-KDRNINPNVITYNS 264
L+LF+EM +E G PDV YN +IDG K+ A EL ++ +D ++ PNV T+N
Sbjct: 204 LELFDEM-SERGV--APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 265 LICGFC-C--VDDWKEAKCLFI--EMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLEL 319
+I G C VDD CL I M N + D+ T++++I+ C G +DK +
Sbjct: 261 MISGLSKCGRVDD-----CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315
Query: 320 MIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQK 379
+ +R + D VTYN+++ GFC G+I + EL+ M K ++ SYNILI ++ K
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGK 374
Query: 380 VEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFAT 439
+++A ++R M ++ TY + GL G + AL ++ +++ + D + +A+
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434
Query: 440 YIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKG 499
ID LCK + EA + + + EL N LI GL + RL A + G
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 500 PIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVV 559
P VV+ + +I LCK G+ +A+ + +M P T+ LL G ++ K +
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554
Query: 560 VLLHK 564
L H+
Sbjct: 555 ELWHQ 559
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 93/206 (45%), Gaps = 2/206 (0%)
Query: 398 SVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVF 457
S + Y+ +L L + + ++++ ++ + D + I KN +A+ VF
Sbjct: 42 SAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVF 101
Query: 458 QAIRNC-KCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCK 516
+ +R CE I +YN L+N + + LF + G P++ T + +I CK
Sbjct: 102 KRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCK 161
Query: 517 EGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLS 576
+ + +KA L M + P ++ T++ + K + L +M +E+ V D++
Sbjct: 162 KKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM-SERGVAPDVT 220
Query: 577 LSSKVVDLLSKDKKYRECLNQFRHLL 602
+ ++D K+K ++ + + LL
Sbjct: 221 CYNILIDGFLKEKDHKTAMELWDRLL 246
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 257/537 (47%), Gaps = 39/537 (7%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
+EAV F+ + K + P ++ ++ ++D SL +R + G P + N +
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
+ CL KMG A V + + PN T+N LI+ LC G++ A L +
Sbjct: 350 LTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
PNV T N +++ LC+++ A +FEEM + +C PD +T+ S+IDGL K G VD
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK---VCTPDEITFCSLIDGLGKVGRVDD 465
Query: 243 AKELLLQMKDRNINPNVITYNSLICGF--------------------CCVD--------- 273
A ++ +M D + N I Y SLI F C D
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 274 ------DWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNP 327
+ ++ + +F E+ PD +++ +I+ K G ++ L M ++G
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 328 DTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLY 387
DT YN ++DGFC G++++A +L M +KG V +Y +I+ K ++++A L+
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 388 REMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN 447
E S+RI +V+ Y++L+ G +VG + +A +++++ + P+ +T+ + +D L K
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 448 GFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTC 507
+ EA+ FQ+++ KC TY LINGLCK+ + A + +Q +G P ++
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 508 STMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHK 564
+TMI L K G + +A L +A VP + ++ G N+ L +
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/540 (28%), Positives = 267/540 (49%), Gaps = 5/540 (0%)
Query: 62 SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
S+ + F M ++ P + FT L+ AK + D+ +SL + S+ L D+ + N+
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
I+ K+G A+ I + P+ VT+ +I LC R+ EA +F+ L
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVD 241
P +NT+I G A L E + G+I P V+ YN I+ L K G VD
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK-GSI--PSVIAYNCILTCLRKMGKVD 360
Query: 242 KAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMI 301
+A ++ +MK ++ PN+ TYN LI C A L M G+ P+V T N M+
Sbjct: 361 EALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 302 NYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCR 361
+ CK K+D+ + E M + PD +T+ SL+DG VGR+ A +++ M+ CR
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 362 HDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKL 421
+ Y LI + ED +Y++M+++ P + NT + +F+ G +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 422 IDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCK 481
++++ VPD+ +++ I GL K GF E ++F +++ C L YN +I+G CK
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 482 MGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVT 541
G++ A +L ++ KG P VVT ++I L K ++D+A L + ++K + V
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 542 FCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLNQFRHL 601
+ +L+ GF + + + ++L ++ +K + +L + ++D L K ++ E L F+ +
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEEL-MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 233/504 (46%), Gaps = 68/504 (13%)
Query: 63 NEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
+EA+ F+ M K +P ++++ IL+ ML + + DT L + GLFP++ +N++
Sbjct: 360 DEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 123 INCLCK-----------------------------------MGITSGAFVVLGRILRSCF 147
++ LCK +G A+ V ++L S
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 148 TPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALK 207
N++ + LI GR + +++K + C P++ NT ++ + +
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 208 LFEEM------------------------VNEFGAI--------CKPDVVTYNSIIDGLC 235
+FEE+ NE + C D YN +IDG C
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 236 KDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVV 295
K G V+KA +LL +MK + P V+TY S+I G +D EA LF E ++ +VV
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 296 TFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSM 355
++++I+ K G++D+ +LE ++Q+G+ P+ T+NSL+D I+ A F SM
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 356 VSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNL 415
C + +Y ILIN CK +K A ++EM + ++PS I+Y T++SGL + GN+
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778
Query: 416 GDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCL 475
+A L D+ + N VPDS + I+GL ++A +F+ R + +T L
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVL 838
Query: 476 INGLCKMGRLKTACKLFHRLQHKG 499
++ L K L+ A + L+ G
Sbjct: 839 LDTLHKNDCLEQAAIVGAVLRETG 862
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 209/439 (47%), Gaps = 14/439 (3%)
Query: 166 RIMEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEM-VNEFGAICKPDV 224
R +E R +++ P ++N+L+ + R RN ++ EM V FG P V
Sbjct: 80 RAIEYFRWYERRTELPHCPE--SYNSLLLVMARCRNFDALDQILGEMSVAGFG----PSV 133
Query: 225 VTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIE 284
T ++ G K + + +++ M+ P Y +LI F V+ LF +
Sbjct: 134 NTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQ 193
Query: 285 MMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGR 344
M + G +P V F +I K+G++D LL+ M ++ D V YN +D F VG+
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
Query: 345 ISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNT 404
+ A + F + + G + D +Y +I CK ++++AV ++ + R P YNT
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 405 LLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCK 464
++ G G +A L+++ + +P + + L K G V EA++VF+ ++
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-D 372
Query: 465 CELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKAN 524
+ TYN LI+ LC+ G+L TA +L +Q G P+V T + M+ LCK ++D+A
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 525 DLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKVVDL 584
+ +M+ K C P E+TFC+L+ G + + + KM + + +S + +
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 585 LSKDKK------YRECLNQ 597
+ +K Y++ +NQ
Sbjct: 493 FNHGRKEDGHKIYKDMINQ 511
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 209/441 (47%), Gaps = 4/441 (0%)
Query: 138 VLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFACDPNVVTFNTLINGLC 197
+LG + + F P+ T ++ G ++ E + + + F P + TLI
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179
Query: 198 RTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINP 257
++ + L LF++M E G +P V + ++I G K+G VD A LL +MK +++
Sbjct: 180 AVNHSDMMLTLFQQM-QELGY--EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA 236
Query: 258 NVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMINYNCKDGKMDKVNRLL 317
+++ YN I F V A F E+ NG++PD VT+ +MI CK ++D+ +
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 318 ELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRHDVYSYNILINANCKD 377
E + + P T YN+++ G+ G+ A L +KG V +YN ++ K
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356
Query: 378 QKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTF 437
KV++A+ ++ EM + P++ TYN L+ L + G L A +L D MQ + P+ T
Sbjct: 357 GKVDEALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415
Query: 438 ATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQH 497
+D LCK+ + EA +F+ + C T+ LI+GL K+GR+ A K++ ++
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 498 KGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSK 557
+ + +++I G+ + + + DM +NC P T + + + K
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 558 VVVLLHKMAAEKLVVSDLSLS 578
+ ++ A + V S S
Sbjct: 536 GRAMFEEIKARRFVPDARSYS 556
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 243/464 (52%), Gaps = 11/464 (2%)
Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARL 173
P+ ++LI+ LC++G AF + ++ P+T T+ LI LC G I +A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 174 FKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG 233
F ++ C PNV T+ LI+GLCR A + +MV + P V+TYN++I+G
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR---IFPSVITYNALING 380
Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
CKDG V A ELL M+ R PNV T+N L+ G C V +A L M+DNG+ PD
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
+V++N +I+ C++G M+ +LL M + PD +T+ ++++ FC G+ A
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLG 500
Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
M+ KG D + LI+ CK K DA+ + ++ RI + + N +L L +
Sbjct: 501 LMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGC 560
Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYN 473
+ + L ++ K+ +VP T+ T +DGL ++G + + ++ + ++ C + Y
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYT 620
Query: 474 CLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAK 533
+INGLC+ GR++ A KL +Q G P+ VT + M+ G++D+A + + M +
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Query: 534 NCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSL 577
++ + +LL+GFV + K +E+ VSD++L
Sbjct: 681 GYELNDRIYSSLLQGFVLSQKGID--------NSEESTVSDIAL 716
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/532 (28%), Positives = 254/532 (47%), Gaps = 39/532 (7%)
Query: 84 FTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITSGAFVVLGRIL 143
++ LL LAK ++R+ ++G + ++N LCK G T A + + +IL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 144 RSCF------------------------------------TPNTVTFNFLINGLCAEGRI 167
+ F PN+V+++ LI+GLC GR+
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 168 MEAARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTY 227
EA L ++ C P+ T+ LI LC A LF+EM+ CKP+V TY
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG---CKPNVHTY 339
Query: 228 NSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMD 287
+IDGLC+DG +++A + +M I P+VITYN+LI G+C A L M
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 288 NGVQPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISR 347
+P+V TFN ++ C+ GK K LL+ M+ G++PD V+YN L+DG C G ++
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 348 ARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLS 407
A +L SM D ++ +INA CK K + A ML + I +T TL+
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 408 GLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCEL 467
G+ +VG DAL +++ + ++ + +D L K V E + + I
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 468 RIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLL 527
+ TY L++GL + G + + ++ ++ G +P+V + +I+ LC+ G++++A LL
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 528 LDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSS 579
M+ P+ VT+ +++G+V N K + + + M ++D SS
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 244/464 (52%), Gaps = 5/464 (1%)
Query: 64 EAVYFFDCMIK-MKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNLL 122
+A+ FD M K + +P S++IL+ L + + + L ++ G P +L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 123 INCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFAC 182
I LC G+ AF + ++ PN T+ LI+GLC +G+I EA + +K+
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 183 DPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDK 242
P+V+T+N LING C+ + A +L M CKP+V T+N +++GLC+ G K
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKR---ACKPNVRTFNELMEGLCRVGKPYK 424
Query: 243 AKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNAMIN 302
A LL +M D ++P++++YN LI G C A L M ++PD +TF A+IN
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
CK GK D + L LM+++G++ D VT +L+DG C VG+ A + ++V
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
+S N++++ K KV++ + + ++ + PSV+TY TL+ GL + G++ + +++
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNCLINGLCKM 482
+ M+L+ +P+ + + I+GLC+ G V EA ++ A+++ TY ++ G
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 483 GRLKTACKLFHRLQHKG-PIPDVVTCSTMIHWLCKEGQMDKAND 525
G+L A + + +G + D + S + ++ + +D + +
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 207/372 (55%), Gaps = 4/372 (1%)
Query: 224 VVTYNSIIDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI 283
++ Y +I++ LCK+G+ + A+ + ++ + SL+ GFC + ++A +F
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF- 253
Query: 284 EMMDNGV--QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCL 341
++M V P+ V+++ +I+ C+ G++++ L + M ++G P T TY L+ C
Sbjct: 254 DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 342 VGRISRARELFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVIT 401
G I +A LF M+ +GC+ +V++Y +LI+ C+D K+E+A + R+M+ +RI PSVIT
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVIT 373
Query: 402 YNTLLSGLFQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR 461
YN L++G + G + A +L+ M+ P+ TF ++GLC+ G +AV + + +
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 462 NCKCELRIETYNCLINGLCKMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMD 521
+ I +YN LI+GLC+ G + TA KL + PD +T + +I+ CK+G+ D
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 522 KANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNKKSKVVVLLHKMAAEKLVVSDLSLSSKV 581
A+ L M K EVT TL+ G + K + +L + +++ + SL+ +
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV-I 552
Query: 582 VDLLSKDKKYRE 593
+D+LSK K +E
Sbjct: 553 LDMLSKGCKVKE 564
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 165/370 (44%), Gaps = 28/370 (7%)
Query: 62 SNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
+ +A++ + ++KM+ S ++L ML+K + +++ ++N GL P +
Sbjct: 527 TRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTT 586
Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
L++ L + G +G+F +L + S PN + +INGLC GR+ EA +L +
Sbjct: 587 LVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDG--LCKDGF 239
PN VT+ ++ G AL+ MV E G + Y+S++ G L + G
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMV-ERGYELNDRI--YSSLLQGFVLSQKGI 703
Query: 240 VDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPDVVTFNA 299
+ + + + R +P I N LI + C+F
Sbjct: 704 DNSEESTVSDIALRETDPECI--NELISVVEQLGGCISGLCIF----------------- 744
Query: 300 MINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKG 359
++ CK+G+ D+ N L++ +++RGV + + +M+ +C + ++ EL ++ G
Sbjct: 745 LVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSG 803
Query: 360 CRHDVYSYNILINANCKDQKVEDAVCLYREMLSER---IRPSVITYNTLLSGLFQVGNLG 416
S+ ++I K+ E A L E+L+ + V+TY L + G+
Sbjct: 804 FVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCS 863
Query: 417 DALKLIDKMQ 426
+ + L+D++
Sbjct: 864 EVIDLVDQLH 873
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 228 bits (582), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 153/508 (30%), Positives = 269/508 (52%), Gaps = 18/508 (3%)
Query: 69 FDCMIKMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSN-GLFPDLFVLNLLINCLC 127
FD M+K+ S + +F +L+ + + + + +R+ S + PD N ++ +
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS 251
Query: 128 KMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEA---ARLFKKLNVFACDP 184
K G S +L + ++ PN VT+N L+ G C G + EA L K+ NV P
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL---P 308
Query: 185 NVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSIIDGLCKDGFVDKAK 244
++ T+N LINGLC + L+L + M + +PDVVTYN++IDG + G +A+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKS---LKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 245 ELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFI-EMMD-NGVQPDVVTFNAMIN 302
+L+ QM++ + N +T+N + + C ++ +EA + E++D +G PD+VT++ +I
Sbjct: 366 KLMEQMENDGVKANQVTHN-ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 303 YNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFVSMVSKGCRH 362
K G + ++ M Q+G+ +T+T N+++D C ++ A L S +G
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 363 DVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVGNLGDALKLI 422
D +Y LI +++KVE A+ ++ EM +I P+V T+N+L+ GL G A++
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 423 DKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIRNCKCELRIETYNC--LINGLC 480
D++ + ++PD TF + I G CK G V +A + + + K + + Y C L+NGLC
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN--ESIKHSFKPDNYTCNILLNGLC 602
Query: 481 KMGRLKTACKLFHRLQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEV 540
K G + A F+ L + + D VT +TMI CK+ ++ +A DLL +ME K P
Sbjct: 603 KEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRF 661
Query: 541 TFCTLLRGFVQNNKKSKVVVLLHKMAAE 568
T+ + + +++ K S+ LL K + +
Sbjct: 662 TYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 247/522 (47%), Gaps = 43/522 (8%)
Query: 114 PDLFVLNLLINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLC---AEGRIMEA 170
P + ++ ++ G A + +++R PN +T N L+ GL + I A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 171 ARLFKKLNVFACDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNEFGAICKPDVVTYNSI 230
+F + NV TFN L+NG C AL + E MV+EF PD VTYN+I
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK--VNPDNVTYNTI 246
Query: 231 IDGLCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGV 290
+ + K G + KELLL MK + PN +TYN+L+ G+C + KEA + M V
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 291 QPDVVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARE 350
PD+ T+N +IN C G M + L++ M + PD VTYN+L+DG +G AR+
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366
Query: 351 LFVSMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLS-ERIRPSVITYNTLLSGL 409
L M + G + + ++NI + CK++K E +E++ P ++TY+TL+
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 410 FQVGNLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKN----------------GFVLE- 452
+VG+L AL+++ +M + ++ T T +D LCK GF+++
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 453 ------------------AVQVFQAIRNCKCELRIETYNCLINGLCKMGRLKTACKLFHR 494
A++++ ++ K + T+N LI GLC G+ + A + F
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 495 LQHKGPIPDVVTCSTMIHWLCKEGQMDKANDLLLDMEAKNCVPSEVTFCTLLRGFVQNNK 554
L G +PD T +++I CKEG+++KA + + + P T LL G +
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 555 KSKVVVLLHKMAAEKLVVSDLSLSSKVVDLLSKDKKYRECLN 596
K + + + E+ V D + ++ KDKK +E +
Sbjct: 607 TEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYD 646
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 233/522 (44%), Gaps = 93/522 (17%)
Query: 63 NEAVYFFDCMI-KMKPSPGMTSFTILLTMLAKNKQYDTVVSLFKRLNSNGLFPDLFVLNL 121
+A+ + M+ + K +P ++ +L ++K + + L + NGL P+ N
Sbjct: 221 EDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280
Query: 122 LINCLCKMGITSGAFVVLGRILRSCFTPNTVTFNFLINGLCAEGRIMEAARLFKKLNVFA 181
L+ CK+G AF ++ + ++ P+ T+N LINGLC G + E L +
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 182 CDPNVVTFNTLINGLCRTRNTLVALKLFEEMVNE------------FGAICK-------- 221
P+VVT+NTLI+G +L A KL E+M N+ +CK
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400
Query: 222 -------------PDVVTY-----------------------------------NSIIDG 233
PD+VTY N+I+D
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Query: 234 LCKDGFVDKAKELLLQMKDRNINPNVITYNSLICGFCCVDDWKEAKCLFIEMMDNGVQPD 293
LCK+ +D+A LL R + +TY +LI GF + ++A ++ EM + P
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520
Query: 294 VVTFNAMINYNCKDGKMDKVNRLLELMIQRGVNPDTVTYNSLMDGFCLVGRISRARELFV 353
V TFN++I C GK + + + + G+ PD T+NS++ G+C GR+ +A E +
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Query: 354 SMVSKGCRHDVYSYNILINANCKDQKVEDAVCLYREMLSERIRPSVITYNTLLSGLFQVG 413
+ + D Y+ NIL+N CK+ E A+ + ++ ER +TYNT++S +
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDK 639
Query: 414 NLGDALKLIDKMQLNDVVPDSFTFATYIDGLCKNGFVLEAVQVFQAIR----NCKCELRI 469
L +A L+ +M+ + PD FT+ ++I L ++G + E ++ + + K +L++
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQV 699
Query: 470 ET-------------------YNCLINGLCKMGRLKTACKLF 492
ET Y+ +I+ LC GRLK + +
Sbjct: 700 ETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSY 741
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 27/160 (16%)
Query: 39 HHFK-DGTSIAKFLNDRHKSGNITSNEAVYFFDCMIKMKPSPGMTSFTILLTMLAKNKQY 97
H FK D + LN K G + +A+ FF+ +I+ + +T + +++ K+K+
Sbjct: 585 HSFKPDNYTCNILLNGLCKEG--MTEKALNFFNTLIEEREVDTVT-YNTMISAFCKDKKL 641
Query: 98 DTVVSLFKRLNSNGLFPDLFVLNLLINCLCKMGITS----------GAFVVLGRILRSCF 147
L + GL PD F N I+ L + G S G F + R L+
Sbjct: 642 KEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVET 701
Query: 148 TPNTVT-------------FNFLINGLCAEGRIMEAARLF 174
N T ++ +I+ LC+ GR+ E +R +
Sbjct: 702 EKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSY 741
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 211,055,724
Number of Sequences: 539616
Number of extensions: 8459822
Number of successful extensions: 38515
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 23820
Number of HSP's gapped (non-prelim): 3128
length of query: 603
length of database: 191,569,459
effective HSP length: 123
effective length of query: 480
effective length of database: 125,196,691
effective search space: 60094411680
effective search space used: 60094411680
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)