Query 037410
Match_columns 161
No_of_seqs 138 out of 1720
Neff 11.0
Searched_HMMs 29240
Date Mon Mar 25 20:32:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037410.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037410hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 1.9E-31 6.5E-36 171.4 14.5 135 2-156 21-158 (169)
2 4b93_B Ankyrin repeat domain-c 100.0 2.2E-31 7.6E-36 182.7 8.6 141 4-145 71-226 (269)
3 3v30_A DNA-binding protein rfx 100.0 3.5E-29 1.2E-33 161.0 14.7 137 1-156 18-157 (172)
4 3f6q_A Integrin-linked protein 100.0 4E-29 1.4E-33 161.8 14.8 137 1-156 21-160 (179)
5 3twr_A Tankyrase-2; ankyrin re 100.0 5.1E-29 1.8E-33 159.2 12.2 135 2-155 25-161 (165)
6 3c5r_A BARD-1, BRCA1-associate 100.0 5.7E-29 1.9E-33 154.6 11.5 122 14-154 5-126 (137)
7 1d9s_A Cyclin-dependent kinase 100.0 7.4E-29 2.5E-33 153.9 11.8 127 9-155 2-132 (136)
8 3v31_A Ankyrin repeat family A 100.0 3.4E-28 1.2E-32 155.7 14.5 135 2-156 20-157 (167)
9 3hra_A Ankyrin repeat family p 100.0 2.8E-28 9.6E-33 160.2 13.6 155 1-155 21-199 (201)
10 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.2E-28 1.8E-32 155.2 14.4 132 5-155 33-167 (169)
11 3aaa_C Myotrophin, protein V-1 100.0 1.6E-28 5.5E-33 149.9 10.7 119 16-153 4-122 (123)
12 1awc_B Protein (GA binding pro 100.0 4.2E-28 1.4E-32 153.3 12.7 125 2-147 19-143 (153)
13 4gpm_A Engineered protein OR26 100.0 3.1E-28 1.1E-32 156.3 11.9 111 4-133 55-165 (169)
14 1bd8_A P19INK4D CDK4/6 inhibit 100.0 5.6E-28 1.9E-32 153.0 12.4 133 2-155 19-154 (156)
15 2rfa_A Transient receptor pote 100.0 9.4E-28 3.2E-32 161.0 13.7 130 2-145 20-162 (232)
16 2rfm_A Putative ankyrin repeat 100.0 6.7E-28 2.3E-32 157.6 12.6 148 8-156 24-189 (192)
17 4hbd_A KN motif and ankyrin re 100.0 1.5E-27 5.1E-32 164.2 13.8 147 11-158 103-274 (276)
18 3aji_A 26S proteasome non-ATPa 100.0 3.2E-27 1.1E-31 158.2 15.1 145 9-154 63-225 (231)
19 1yyh_A HN1;, notch 1, ankyrin 100.0 6.6E-28 2.3E-32 163.9 11.6 153 4-157 75-246 (253)
20 1sw6_A Regulatory protein SWI6 100.0 5.2E-28 1.8E-32 170.1 10.2 143 3-145 114-324 (327)
21 1oy3_D Transcription factor in 100.0 3.7E-27 1.3E-31 161.9 14.1 145 11-156 37-247 (282)
22 3aji_A 26S proteasome non-ATPa 99.9 7.3E-27 2.5E-31 156.5 14.8 155 1-156 22-194 (231)
23 1ihb_A P18-INK4C(INK6), cyclin 99.9 3E-27 1E-31 150.4 12.2 132 3-155 23-158 (162)
24 1yyh_A HN1;, notch 1, ankyrin 99.9 3E-27 1E-31 160.6 12.6 154 2-156 40-212 (253)
25 2rfm_A Putative ankyrin repeat 99.9 2.2E-27 7.6E-32 155.1 11.3 93 63-156 61-156 (192)
26 2f8y_A Notch homolog 1, transl 99.9 6.1E-27 2.1E-31 156.1 13.5 129 15-144 21-165 (223)
27 2dzn_A Probable 26S proteasome 99.9 3.2E-27 1.1E-31 157.9 12.0 147 10-156 62-227 (228)
28 2f8y_A Notch homolog 1, transl 99.9 1.2E-26 4.1E-31 154.6 14.2 152 5-157 44-214 (223)
29 2jab_A H10-2-G3; HER2, darpin, 99.9 3.4E-27 1.2E-31 146.4 10.5 122 15-155 10-134 (136)
30 2vge_A RELA-associated inhibit 99.9 5.6E-27 1.9E-31 157.4 11.9 137 1-156 1-145 (229)
31 3b7b_A Euchromatic histone-lys 99.9 6.2E-27 2.1E-31 157.4 12.0 140 5-145 63-218 (237)
32 2dzn_A Probable 26S proteasome 99.9 2.8E-26 9.6E-31 153.3 14.7 153 1-154 18-194 (228)
33 2etb_A Transient receptor pote 99.9 1.4E-26 4.7E-31 157.5 13.1 132 7-146 27-181 (256)
34 1oy3_D Transcription factor in 99.9 6.8E-27 2.3E-31 160.6 11.4 122 8-148 147-269 (282)
35 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.3E-26 1.5E-30 139.1 13.8 119 18-155 1-122 (126)
36 3ehr_A Osteoclast-stimulating 99.9 2.8E-27 9.7E-32 157.9 9.0 126 13-157 67-193 (222)
37 1k1a_A B-cell lymphoma 3-encod 99.9 6.3E-26 2.1E-30 152.6 15.7 148 7-155 34-204 (241)
38 1ikn_D Protein (I-kappa-B-alph 99.9 1.1E-26 3.9E-31 156.2 11.7 146 11-157 37-207 (236)
39 1s70_B 130 kDa myosin-binding 99.9 1E-26 3.5E-31 161.2 11.7 139 5-144 92-272 (299)
40 1k1a_A B-cell lymphoma 3-encod 99.9 1E-26 3.6E-31 156.5 11.4 153 4-157 64-236 (241)
41 2pnn_A Transient receptor pote 99.9 1.2E-25 4.1E-30 154.2 16.1 121 14-146 49-193 (273)
42 1bi7_B P16INK4A, MTS1, multipl 99.9 1E-26 3.6E-31 147.4 9.8 114 12-145 5-119 (156)
43 3d9h_A CDNA FLJ77766, highly s 99.9 3.1E-26 1E-30 158.3 12.8 95 63-159 183-278 (285)
44 3t8k_A Uncharacterized protein 99.9 3.4E-27 1.2E-31 153.7 6.6 126 12-156 30-176 (186)
45 2rfa_A Transient receptor pote 99.9 9E-26 3.1E-30 151.3 13.5 139 13-157 69-220 (232)
46 3kea_A K1L; tropism, ANK repea 99.9 4.6E-26 1.6E-30 157.4 11.9 120 2-144 16-136 (285)
47 2xai_A ASB-9, ankyrin repeat a 99.9 2.6E-25 8.9E-30 151.8 15.5 151 3-156 21-188 (261)
48 3jxi_A Vanilloid receptor-rela 99.9 9E-26 3.1E-30 153.7 13.1 131 7-145 30-184 (260)
49 1n0q_A 3ANK, 3 ankyrin repeats 99.9 8.2E-26 2.8E-30 131.4 10.7 93 18-129 1-93 (93)
50 3deo_A Signal recognition part 99.9 2.1E-26 7.1E-31 149.6 8.7 111 16-146 41-152 (183)
51 2xai_A ASB-9, ankyrin repeat a 99.9 3.5E-25 1.2E-29 151.1 15.2 152 4-158 54-221 (261)
52 3utm_A Tankyrase-1; tankyrase, 99.9 1.1E-25 3.9E-30 158.6 13.0 128 2-148 41-168 (351)
53 2etb_A Transient receptor pote 99.9 5.1E-26 1.8E-30 154.7 10.8 136 15-156 86-243 (256)
54 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.1E-26 1E-30 154.6 9.4 129 7-155 26-160 (239)
55 1bi7_B P16INK4A, MTS1, multipl 99.9 9.3E-27 3.2E-31 147.6 6.2 121 3-144 30-151 (156)
56 2l6b_A NR1C; ankyrin, consensu 99.9 2.3E-26 7.8E-31 138.7 7.4 109 14-141 4-112 (115)
57 3jxi_A Vanilloid receptor-rela 99.9 3.8E-26 1.3E-30 155.6 9.3 140 12-156 86-247 (260)
58 1ikn_D Protein (I-kappa-B-alph 99.9 3.8E-26 1.3E-30 153.6 8.9 144 13-156 2-173 (236)
59 1n11_A Ankyrin; clathrin, BAND 99.9 3.4E-25 1.2E-29 160.9 14.5 152 4-156 230-399 (437)
60 2pnn_A Transient receptor pote 99.9 8.3E-26 2.8E-30 155.0 10.6 138 15-157 97-256 (273)
61 3utm_A Tankyrase-1; tankyrase, 99.9 3.7E-25 1.3E-29 156.0 13.9 80 64-144 241-320 (351)
62 1s70_B 130 kDa myosin-binding 99.9 4.1E-25 1.4E-29 153.1 13.9 135 2-156 57-254 (299)
63 3ui2_A Signal recognition part 99.9 8.5E-26 2.9E-30 152.9 10.0 110 16-145 42-152 (244)
64 3v31_A Ankyrin repeat family A 99.9 4.6E-25 1.6E-29 141.0 12.5 120 18-156 2-124 (167)
65 3d9h_A CDNA FLJ77766, highly s 99.9 7.4E-25 2.5E-29 151.4 14.4 148 7-156 80-244 (285)
66 3b7b_A Euchromatic histone-lys 99.9 8.6E-25 3E-29 146.9 14.4 151 5-156 30-199 (237)
67 2fo1_E LIN-12 protein; beta-ba 99.9 8E-25 2.7E-29 156.4 14.9 138 7-144 154-353 (373)
68 2fo1_E LIN-12 protein; beta-ba 99.9 1E-24 3.4E-29 155.9 13.8 120 10-130 226-372 (373)
69 3ljn_A Hypothetical protein; a 99.9 4.2E-25 1.4E-29 157.1 11.7 124 15-156 134-266 (364)
70 1wdy_A 2-5A-dependent ribonucl 99.9 3.4E-24 1.2E-28 147.1 15.2 135 2-156 22-170 (285)
71 3kea_A K1L; tropism, ANK repea 99.9 6.4E-25 2.2E-29 151.7 11.6 136 19-156 62-217 (285)
72 3ljn_A Hypothetical protein; a 99.9 1.9E-24 6.5E-29 153.7 14.1 151 2-156 37-233 (364)
73 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.1E-24 3.7E-29 139.7 11.3 123 15-156 10-135 (169)
74 1n11_A Ankyrin; clathrin, BAND 99.9 2.5E-24 8.5E-29 156.4 14.6 152 4-156 197-366 (437)
75 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.8E-24 6.1E-29 137.6 12.1 108 4-129 55-162 (162)
76 3v30_A DNA-binding protein rfx 99.9 3.4E-25 1.2E-29 142.3 8.7 118 3-140 54-171 (172)
77 2vge_A RELA-associated inhibit 99.9 8.4E-26 2.9E-30 151.6 6.0 122 2-143 38-162 (229)
78 2jab_A H10-2-G3; HER2, darpin, 99.9 2.1E-24 7.2E-29 133.8 11.8 104 5-127 33-136 (136)
79 1wdy_A 2-5A-dependent ribonucl 99.9 8E-24 2.7E-28 145.2 15.8 90 65-155 177-274 (285)
80 1d9s_A Cyclin-dependent kinase 99.9 2.9E-25 1E-29 137.6 7.7 106 3-129 30-136 (136)
81 1awc_B Protein (GA binding pro 99.9 1.8E-24 6.1E-29 136.5 10.0 118 19-156 2-122 (153)
82 3f6q_A Integrin-linked protein 99.9 8.3E-24 2.8E-28 136.7 13.1 122 17-156 3-127 (179)
83 3twr_A Tankyrase-2; ankyrin re 99.9 4.1E-24 1.4E-28 136.4 10.7 125 14-156 3-130 (165)
84 4g8k_A 2-5A-dependent ribonucl 99.9 1.7E-23 5.9E-28 147.4 14.7 140 2-143 42-208 (337)
85 3eu9_A Huntingtin-interacting 99.9 2E-23 6.9E-28 140.0 14.0 123 3-144 27-149 (240)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.3E-23 4.3E-28 128.1 11.6 108 2-129 19-126 (126)
87 4b93_B Ankyrin repeat domain-c 99.9 2.8E-24 9.6E-29 147.4 9.1 144 12-156 45-207 (269)
88 2b0o_E UPLC1; arfgap, structur 99.9 1.5E-24 5.3E-29 150.8 7.8 118 3-146 169-295 (301)
89 3eu9_A Huntingtin-interacting 99.9 1.7E-23 5.8E-28 140.4 12.2 154 2-156 59-232 (240)
90 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.7E-23 5.7E-28 132.3 11.4 118 19-155 2-122 (156)
91 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.9E-24 2E-28 143.4 7.8 113 5-136 56-171 (239)
92 3lvq_E ARF-GAP with SH3 domain 99.9 2.8E-23 9.7E-28 153.3 12.0 119 3-141 150-277 (497)
93 3hra_A Ankyrin repeat family p 99.9 2.2E-22 7.6E-27 132.0 14.5 141 16-156 2-167 (201)
94 1dcq_A PYK2-associated protein 99.9 7.2E-23 2.5E-27 141.0 12.3 100 12-130 162-264 (278)
95 3jue_A Arfgap with coiled-coil 99.9 8.9E-23 3.1E-27 145.3 10.6 121 16-155 196-322 (368)
96 4g8k_A 2-5A-dependent ribonucl 99.9 3.6E-22 1.2E-26 140.7 13.6 143 10-157 159-324 (337)
97 1dcq_A PYK2-associated protein 99.9 2.4E-22 8.4E-27 138.3 11.6 127 19-158 130-262 (278)
98 3t8k_A Uncharacterized protein 99.9 3.5E-23 1.2E-27 134.8 6.1 113 3-134 59-184 (186)
99 3ehr_A Osteoclast-stimulating 99.9 3.1E-23 1.1E-27 138.2 5.8 116 3-138 91-207 (222)
100 3jue_A Arfgap with coiled-coil 99.9 3.8E-22 1.3E-26 142.0 11.5 120 6-144 220-344 (368)
101 3lvq_E ARF-GAP with SH3 domain 99.9 6E-22 2E-26 146.3 12.4 125 19-156 132-262 (497)
102 4hbd_A KN motif and ankyrin re 99.9 3.9E-22 1.3E-26 137.2 10.5 101 8-127 172-273 (276)
103 2b0o_E UPLC1; arfgap, structur 99.9 1.4E-21 4.9E-26 135.9 13.3 124 19-155 151-280 (301)
104 2zgd_A 3 repeat synthetic anky 99.9 3.5E-22 1.2E-26 119.5 8.5 97 8-123 13-109 (110)
105 3deo_A Signal recognition part 99.9 1.2E-21 4.1E-26 127.0 10.4 111 2-150 61-172 (183)
106 3ui2_A Signal recognition part 99.9 4.7E-22 1.6E-26 134.5 7.6 91 2-113 62-153 (244)
107 3aaa_C Myotrophin, protein V-1 99.9 5.1E-22 1.7E-26 120.9 6.7 92 2-113 24-115 (123)
108 3c5r_A BARD-1, BRCA1-associate 99.9 1.5E-22 5.2E-27 125.4 4.5 104 5-127 29-132 (137)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.9E-20 6.5E-25 108.5 9.7 86 69-155 1-89 (93)
110 1sw6_A Regulatory protein SWI6 99.8 6.3E-21 2.2E-25 134.0 6.7 136 4-145 37-209 (327)
111 2aja_A Ankyrin repeat family p 99.8 9.9E-22 3.4E-26 140.3 1.3 115 15-145 88-206 (376)
112 2aja_A Ankyrin repeat family p 99.8 2.5E-21 8.6E-26 138.2 -0.2 107 14-144 123-232 (376)
113 2zgd_A 3 repeat synthetic anky 99.8 5.8E-19 2E-23 105.4 8.8 86 63-149 17-102 (110)
114 2l6b_A NR1C; ankyrin, consensu 99.8 1.2E-18 4E-23 104.7 7.8 90 65-155 4-96 (115)
115 1gp8_A Protein (scaffolding pr 49.8 17 0.00058 16.5 2.3 20 22-41 16-35 (40)
116 2cmy_B Beta trypsin, veronica 48.1 7.3 0.00025 16.4 0.9 29 15-43 2-30 (34)
117 2plx_B Peptide inhibitor; heli 33.2 28 0.00095 13.7 1.9 21 22-42 4-24 (26)
118 3zrh_A Ubiquitin thioesterase 29.7 59 0.002 23.7 3.6 27 17-43 67-93 (454)
119 3zrh_A Ubiquitin thioesterase 23.9 2.2E+02 0.0074 20.9 6.2 46 79-125 31-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.98 E-value=1.9e-31 Score=171.35 Aligned_cols=135 Identities=24% Similarity=0.344 Sum_probs=122.0
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
+.|| ..+++++.+|..|+||||+|+..++.+++++|++.|++++. ++..|.||||+|+..|
T Consensus 21 ~~Ll-~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~------------------~d~~g~TpLh~A~~~g 81 (169)
T 4gpm_A 21 KDLI-ENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA------------------KDSDGRTPLHHAAENG 81 (169)
T ss_dssp HHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTT
T ss_pred HHHH-HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh------------------hccCCCCHHHHHHHcC
Confidence 4444 56789999999999999999999999999999999988654 7889999999999999
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY 156 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~ 156 (161)
+.+++++|++.|++ ++.+|..|+||||+|++.|+.+++++|+++|++++.+|..|+||+++|. ...+.+.|.++
T Consensus 82 ~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 158 (169)
T 4gpm_A 82 HKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQ 158 (169)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred CHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 99999999999998 8899999999999999999999999999999999999999999999964 45566666554
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.2e-31 Score=182.72 Aligned_cols=141 Identities=20% Similarity=0.196 Sum_probs=124.7
Q ss_pred HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcC
Q 037410 4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANN 68 (161)
Q Consensus 4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 68 (161)
+|...+++++.+|.+|+||||+|+..|+.+++++|++.|++++..+..+.+++... +..++.++.
T Consensus 71 ~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~ 150 (269)
T 4b93_B 71 KVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL 150 (269)
T ss_dssp ----CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCC
Confidence 34456788999999999999999999999999999999999988877776665332 233566788
Q ss_pred CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410 69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ 145 (161)
Q Consensus 69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~ 145 (161)
.|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|+|.
T Consensus 151 ~g~TpL~~A~~~g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 151 SGNTPLIYACSGGHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAE 226 (269)
T ss_dssp TCCCHHHHHHHTTCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 999999999999999999999999998 8899999999999999999999999999999999999999999999964
No 3
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=3.5e-29 Score=160.99 Aligned_cols=137 Identities=23% Similarity=0.237 Sum_probs=122.5
Q ss_pred ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc
Q 037410 1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH 80 (161)
Q Consensus 1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~ 80 (161)
++.+++..+..++.+|..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..
T Consensus 18 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 18 LKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI------------------LAKERESALSLASTG 79 (172)
T ss_dssp HHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC------------------CCTTCCCHHHHHHHT
T ss_pred HHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh------------------hcccCCCHHHHHHHC
Confidence 35677787777999999999999999999999999999999988554 688899999999999
Q ss_pred CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHhh
Q 037410 81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLTRY 156 (161)
Q Consensus 81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~~ 156 (161)
++.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||++++.. ..+.+.|.++
T Consensus 80 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (172)
T 3v30_A 80 GYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157 (172)
T ss_dssp TCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence 999999999999998 88899999999999999999999999999999999999999999999643 4455555443
No 4
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=4e-29 Score=161.80 Aligned_cols=137 Identities=19% Similarity=0.196 Sum_probs=122.8
Q ss_pred ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc
Q 037410 1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH 80 (161)
Q Consensus 1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~ 80 (161)
|+.+++..+..++.+|..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..
T Consensus 21 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 21 VRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV------------------MNRGDDTPLHLAASH 82 (179)
T ss_dssp HHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHT
T ss_pred HHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHc
Confidence 35677777888999999999999999999999999999999988654 688999999999999
Q ss_pred CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410 81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY 156 (161)
Q Consensus 81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~ 156 (161)
|+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||++++. ...+.+.|.++
T Consensus 83 ~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~ 160 (179)
T 3f6q_A 83 GHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKM 160 (179)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998 8899999999999999999999999999999999999999999999853 34445555443
No 5
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=5.1e-29 Score=159.22 Aligned_cols=135 Identities=22% Similarity=0.200 Sum_probs=119.9
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
+.+++..+...+..+..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..+
T Consensus 25 ~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~ 86 (165)
T 3twr_A 25 KKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA------------------KDKGGLVPLHNACSYG 86 (165)
T ss_dssp HHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTT
T ss_pred HHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc------------------cCCCCCCHHHHHHHcC
Confidence 4566667778888889999999999999999999999999987554 7889999999999999
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH--hHHHHHHHHh
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ--CTFILLSLTR 155 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~--~~~~~~~l~~ 155 (161)
+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||++++. ...+.+.|..
T Consensus 87 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~i~~~L~~ 161 (165)
T 3twr_A 87 HYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTDIQDLLRG 161 (165)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCTTCHHHHHHHHT
T ss_pred cHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhcCChHHHHHHhh
Confidence 99999999999998 8889999999999999999999999999999999999999999999853 3345555443
No 6
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.96 E-value=5.7e-29 Score=154.58 Aligned_cols=122 Identities=23% Similarity=0.183 Sum_probs=111.8
Q ss_pred ccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcC
Q 037410 14 NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQG 93 (161)
Q Consensus 14 ~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g 93 (161)
.+|..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..++.+++++|++.|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 66 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV------------------KDHAGWTPLHEACNHGHLKVVELLLQHK 66 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 6789999999999999999999999999887554 6889999999999999999999999999
Q ss_pred CCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHHHHHH
Q 037410 94 PDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLT 154 (161)
Q Consensus 94 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~l~ 154 (161)
++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||++++........+.
T Consensus 67 ~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~ 126 (137)
T 3c5r_A 67 AL-VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLL 126 (137)
T ss_dssp CC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHS
T ss_pred Cc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHh
Confidence 98 8889999999999999999999999999999999999999999999976655555443
No 7
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=7.4e-29 Score=153.95 Aligned_cols=127 Identities=17% Similarity=0.178 Sum_probs=114.6
Q ss_pred CccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHH
Q 037410 9 PSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKI 88 (161)
Q Consensus 9 ~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 88 (161)
+..++.+|..|.||||+|+..|+.+++++|++.|.+++. ++..|.||||+|+. ++.+++++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~-~~~~~v~~ 62 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNA------------------LNRFGRRPIQVMMM-GSAQVAEL 62 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCTTTTTSTT-SCHHHHHH
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCC------------------cCCCCCCHHHHHHc-CCHHHHHH
Confidence 457788999999999999999999999999999887554 68899999999999 99999999
Q ss_pred HHHcCCCCccccCCC-CCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410 89 LTKQGPDNPYSANNY-GKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTR 155 (161)
Q Consensus 89 L~~~g~~~~~~~~~~-~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~ 155 (161)
|++.|++ ++.++.. |.||||+|+..++.+++++|+++|++++.+|..|+||++++. ...+.+.|.+
T Consensus 63 Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~ 132 (136)
T 1d9s_A 63 LLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHA 132 (136)
T ss_dssp HHHHTCC-SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHCCCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999998 8889999 999999999999999999999999999999999999999974 3445555544
No 8
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=3.4e-28 Score=155.67 Aligned_cols=135 Identities=24% Similarity=0.267 Sum_probs=119.4
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
+.+++. +..++.+|..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..+
T Consensus 20 ~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 20 ATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL------------------LGKGRESALSLACSKG 80 (167)
T ss_dssp HHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHHT
T ss_pred HHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHcC
Confidence 445555 577899999999999999999999999999999887554 6888999999999999
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHhh
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLTRY 156 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~~ 156 (161)
+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.++..|+||++++.. ..+.+.|.++
T Consensus 81 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 81 YTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp CHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 99999999999998 88899999999999999999999999999999999999999999999644 4455555443
No 9
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=2.8e-28 Score=160.20 Aligned_cols=155 Identities=23% Similarity=0.237 Sum_probs=128.9
Q ss_pred ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh----------------hhhhh
Q 037410 1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD----------------RQMIR 64 (161)
Q Consensus 1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~----------------~~~~~ 64 (161)
++.++...+..++..|..|+||||+|+..|+.+++++|++.|.+++..+..+.+++... ....+
T Consensus 21 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~ 100 (201)
T 3hra_A 21 VKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLN 100 (201)
T ss_dssp HHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT
T ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccc
Confidence 35677777778999999999999999999999999999999999988877776665431 12345
Q ss_pred hhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCC-----hHHHHHHHhcCCCCCCCCCcccc
Q 037410 65 MANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY-----SEMVIELLETAHQCPMKAPTERQ 139 (161)
Q Consensus 65 ~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~-----~~~~~~Ll~~g~~~~~~~~~~~t 139 (161)
..+..|.||||+|+..|+.+++++|++.|+.+++..+..|.||||+|+..+. .+++++|+++|++++.+|..|+|
T Consensus 101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 180 (201)
T 3hra_A 101 KHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRT 180 (201)
T ss_dssp CCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCC
Confidence 5677899999999999999999999999944488889999999999999887 89999999999999999999999
Q ss_pred hHHHHHh---HHHHHHHHh
Q 037410 140 LCMLQQC---TFILLSLTR 155 (161)
Q Consensus 140 ~l~~~~~---~~~~~~l~~ 155 (161)
|++++.. ..+.+.|.+
T Consensus 181 ~l~~A~~~~~~~~~~~Ll~ 199 (201)
T 3hra_A 181 AMDYANQKGYTEISKILAQ 199 (201)
T ss_dssp HHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHHHcCCHhHHHHHHh
Confidence 9998643 445554443
No 10
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=5.2e-28 Score=155.22 Aligned_cols=132 Identities=26% Similarity=0.256 Sum_probs=117.8
Q ss_pred HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410 5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH 84 (161)
Q Consensus 5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 84 (161)
|...+.+++.+|..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..|+.+
T Consensus 33 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~ 94 (169)
T 2y1l_E 33 LMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA------------------VDHAGMTPLRLAALFGHLE 94 (169)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHH
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHH
Confidence 3445788899999999999999999999999999999887554 6888999999999999999
Q ss_pred HHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHh
Q 037410 85 VVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLTR 155 (161)
Q Consensus 85 ~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~ 155 (161)
++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||++++.. ..+.+.|.+
T Consensus 95 ~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 95 IVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 99999999998 88899999999999999999999999999999999999999999999643 444444443
No 11
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.96 E-value=1.6e-28 Score=149.90 Aligned_cols=119 Identities=21% Similarity=0.157 Sum_probs=108.0
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCC
Q 037410 16 NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD 95 (161)
Q Consensus 16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~ 95 (161)
+..|.||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..++.+++++|++.|++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 65 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNR------------------TLEGGRKPLHYAADCGQLEILEFLLLKGAD 65 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTS------------------CCTTSSCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCc------------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 56789999999999999999999999887554 788999999999999999999999999988
Q ss_pred CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHHHHH
Q 037410 96 NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSL 153 (161)
Q Consensus 96 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~l 153 (161)
++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+||++++....+..+|
T Consensus 66 -~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ll 122 (123)
T 3aaa_C 66 -INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALL 122 (123)
T ss_dssp -TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHHH
T ss_pred -CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHHh
Confidence 889999999999999999999999999999999999999999999998776666654
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=4.2e-28 Score=153.28 Aligned_cols=125 Identities=20% Similarity=0.261 Sum_probs=111.9
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
+.+++... ..+ .|..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..|
T Consensus 19 ~~Ll~~g~-~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 19 RILMANGA-PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA------------------RTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHTC-CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC------------------CCTTCCCHHHHHHHHT
T ss_pred HHHHHcCC-CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcC
Confidence 45565543 333 688899999999999999999999999887554 6888999999999999
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhH
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCT 147 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~ 147 (161)
+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||++++...
T Consensus 79 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 143 (153)
T 1awc_B 79 HANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDN 143 (153)
T ss_dssp CHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred hHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 99999999999998 889999999999999999999999999999999999999999999997543
No 13
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=3.1e-28 Score=156.33 Aligned_cols=111 Identities=27% Similarity=0.366 Sum_probs=97.8
Q ss_pred HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcH
Q 037410 4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV 83 (161)
Q Consensus 4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~ 83 (161)
++...+++++.+|..|+||||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.
T Consensus 55 ~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~------------------~d~~G~TpLh~A~~~g~~ 116 (169)
T 4gpm_A 55 LLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNA------------------KDSDGRTPLHHAAENGHK 116 (169)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCH
T ss_pred HHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCC------------------CCCCCCCHHHHHHHcCCH
Confidence 44466889999999999999999999999999999999988665 788999999999999999
Q ss_pred HHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCC
Q 037410 84 HVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMK 133 (161)
Q Consensus 84 ~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 133 (161)
+++++|++.|++ ++.+|..|.|||++|++.|+.+++++|+++|++++..
T Consensus 117 ~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 117 EVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEHH 165 (169)
T ss_dssp HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-------
T ss_pred HHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCCC
Confidence 999999999998 8899999999999999999999999999999998753
No 14
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=5.6e-28 Score=153.01 Aligned_cols=133 Identities=18% Similarity=0.205 Sum_probs=118.4
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
+.+++..+..++..|..|+||||+ +..|+.+++++|++.|.+++. ++..|.||||+|+..|
T Consensus 19 ~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 19 RRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNV------------------QDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTT
T ss_pred HHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC------------------cCCCCCCHHHHHHHcC
Confidence 556766566889999999999999 999999999999999988654 7889999999999999
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTR 155 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~ 155 (161)
+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++ ++++.+|..|+||+++|. ...+.+.|.+
T Consensus 80 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 80 FLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp CHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred cHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 99999999999988 889999999999999999999999999999 999999999999999974 3445555544
No 15
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=9.4e-28 Score=160.98 Aligned_cols=130 Identities=25% Similarity=0.286 Sum_probs=115.3
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
+.+++..+.+++.+|..|+||||+|+..|+.+++++|++.|.+..... .+..+..|.||||+|+..|
T Consensus 20 ~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-------------~~~~~~~g~t~L~~A~~~~ 86 (232)
T 2rfa_A 20 SKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEP-------------MTSELYEGQTALHIAVINQ 86 (232)
T ss_dssp HHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCC-------------CCSTTTTTCCHHHHHHHTT
T ss_pred HHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccc-------------ccccCCCCcCHHHHHHHcC
Confidence 566766689999999999999999999999999999999998753311 1335778999999999999
Q ss_pred cHHHHHHHHHcCCCCccccCC-------------CCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410 82 NVHVVKILTKQGPDNPYSANN-------------YGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ 145 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~-------------~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~ 145 (161)
+.+++++|++.|++ ++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|+||+|++.
T Consensus 87 ~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~ 162 (232)
T 2rfa_A 87 NVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILI 162 (232)
T ss_dssp CHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999988 666554 7999999999999999999999999999999999999999964
No 16
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=6.7e-28 Score=157.60 Aligned_cols=148 Identities=21% Similarity=0.174 Sum_probs=115.8
Q ss_pred CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcCCCcc
Q 037410 8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANNEKNT 72 (161)
Q Consensus 8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t 72 (161)
.+..++.+|..|+||||+|+..|+.+++++|++.|.+++..+..+.++++.. ...++..+..|.|
T Consensus 24 ~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 103 (192)
T 2rfm_A 24 LDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT 103 (192)
T ss_dssp HHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred hHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Confidence 3445667777778888888887777777777777777666665555554321 1224556788999
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHH
Q 037410 73 ALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFI 149 (161)
Q Consensus 73 ~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~ 149 (161)
|||+|+..++.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||+++|. ...+
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 182 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEV 182 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHH
Confidence 99999999999999999999988 7888999999999999999999999999999999999999999999863 4455
Q ss_pred HHHHHhh
Q 037410 150 LLSLTRY 156 (161)
Q Consensus 150 ~~~l~~~ 156 (161)
.+.|.++
T Consensus 183 v~~Ll~~ 189 (192)
T 2rfm_A 183 IKIFTEV 189 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 5555544
No 17
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=164.22 Aligned_cols=147 Identities=21% Similarity=0.179 Sum_probs=126.5
Q ss_pred cccccCCCCCcHHHHHHHhCCHHHHHHHHHhhH-hhhcCCCCCCCccchhh--------------------hhhhhhcCC
Q 037410 11 LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAK-IAQHGDGEPESGIGADR--------------------QMIRMANNE 69 (161)
Q Consensus 11 ~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~ 69 (161)
.++.+|..|+||||+|+..|+.+++++|++.|. +++..+..+.+++...- ......+..
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 182 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQA 182 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTT
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCC
Confidence 478899999999999999999999999999998 88877777766654221 123345677
Q ss_pred CccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHh-cCCCCCCCCCcccchHHHHH---
Q 037410 70 KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE-TAHQCPMKAPTERQLCMLQQ--- 145 (161)
Q Consensus 70 g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~l~~~~--- 145 (161)
|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|+||+++|.
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g 261 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAG 261 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcC
Confidence 99999999999999999999999998 88999999999999999999999999999 89999999999999999964
Q ss_pred hHHHHHHHHhhhC
Q 037410 146 CTFILLSLTRYSG 158 (161)
Q Consensus 146 ~~~~~~~l~~~~~ 158 (161)
...+.+.|.+..+
T Consensus 262 ~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 262 QSEIASMLYSRMN 274 (276)
T ss_dssp CHHHHHHHHHHCC
T ss_pred CHHHHHHHHhccC
Confidence 4466666666554
No 18
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=3.2e-27 Score=158.19 Aligned_cols=145 Identities=18% Similarity=0.169 Sum_probs=91.1
Q ss_pred CccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcCCCccH
Q 037410 9 PSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANNEKNTA 73 (161)
Q Consensus 9 ~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~ 73 (161)
+..++.+|..|+||||+|+..|+.+++++|++.|.+++..+..+.+++... ...++..+..|.||
T Consensus 63 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 142 (231)
T 3aji_A 63 GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATA 142 (231)
T ss_dssp TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 445555555555555555555555555555555555555444444443211 11233455667777
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHH
Q 037410 74 LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFIL 150 (161)
Q Consensus 74 l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~ 150 (161)
||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||++++ +...+.
T Consensus 143 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~ 221 (231)
T 3aji_A 143 MHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILK 221 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHH
Confidence 7777777777777777777776 666777777777777777777777777777777777777777777775 333444
Q ss_pred HHHH
Q 037410 151 LSLT 154 (161)
Q Consensus 151 ~~l~ 154 (161)
..|.
T Consensus 222 ~lL~ 225 (231)
T 3aji_A 222 RLAE 225 (231)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 4443
No 19
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=6.6e-28 Score=163.92 Aligned_cols=153 Identities=20% Similarity=0.160 Sum_probs=126.9
Q ss_pred HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhH-hhhcCCCCCCCccchh---------------hhhhhhhc
Q 037410 4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAK-IAQHGDGEPESGIGAD---------------RQMIRMAN 67 (161)
Q Consensus 4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~ 67 (161)
+|...++.++.+|..|+||||+|+..|+.+++++|++.+. .++..+..+.+++... ...++..+
T Consensus 75 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d 154 (253)
T 1yyh_A 75 RLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD 154 (253)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBC
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcC
Confidence 3445678889999999999999999999999999999987 6666666666655321 23356678
Q ss_pred CCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh-
Q 037410 68 NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC- 146 (161)
Q Consensus 68 ~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~- 146 (161)
..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|++.++.+++++|+++|++++.+|..|+||+++|..
T Consensus 155 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 233 (253)
T 1yyh_A 155 DLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQER 233 (253)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHc
Confidence 8899999999999999999999999998 88899999999999999999999999999999999999999999999644
Q ss_pred --HHHHHHHHhhh
Q 037410 147 --TFILLSLTRYS 157 (161)
Q Consensus 147 --~~~~~~l~~~~ 157 (161)
..+...|..+.
T Consensus 234 g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 234 MHHDIVRLLDLEH 246 (253)
T ss_dssp TCHHHHHHHHC--
T ss_pred CCHHHHHHHHHHh
Confidence 44455544443
No 20
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=5.2e-28 Score=170.13 Aligned_cols=143 Identities=18% Similarity=0.143 Sum_probs=123.7
Q ss_pred hHHHhCCccccc-cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh-------------------hh
Q 037410 3 EILELCPSLLLN-VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR-------------------QM 62 (161)
Q Consensus 3 ~ll~~~~~~~~~-~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~-------------------~~ 62 (161)
+++...+.+++. +|..|+||||+|+..|+.+++++|+++|++++..+..+.++++..- ..
T Consensus 114 ~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~ 193 (327)
T 1sw6_A 114 DAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC 193 (327)
T ss_dssp HHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG
T ss_pred HHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc
Confidence 344566788898 8999999999999999999999999999999998888877764321 23
Q ss_pred hhhhcCCCccHHHHHHh----cCcHHHHHHHHHcCC--------------------C-----------------------
Q 037410 63 IRMANNEKNTALHEAVC----HGNVHVVKILTKQGP--------------------D----------------------- 95 (161)
Q Consensus 63 ~~~~~~~g~t~l~~a~~----~~~~~~~~~L~~~g~--------------------~----------------------- 95 (161)
++.++..|.||||+|+. .|+.+++++|++.+. +
T Consensus 194 ~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~ 273 (327)
T 1sw6_A 194 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIA 273 (327)
T ss_dssp GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHH
Confidence 56778899999999998 899999999987742 0
Q ss_pred -CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410 96 -NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ 145 (161)
Q Consensus 96 -~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~ 145 (161)
.++.+|..|.||||+|++.|+.+++++|+++|++++.+|..|+||+|+|.
T Consensus 274 ~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 324 (327)
T 1sw6_A 274 NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324 (327)
T ss_dssp HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred hCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 16778899999999999999999999999999999999999999999863
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=3.7e-27 Score=161.94 Aligned_cols=145 Identities=21% Similarity=0.241 Sum_probs=121.3
Q ss_pred cccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh-------------------------------
Q 037410 11 LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD------------------------------- 59 (161)
Q Consensus 11 ~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~------------------------------- 59 (161)
.++.+|..|+||||+|+..|+.+++++|+++|++++..+..+.++++..
T Consensus 37 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 37 YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------
T ss_pred cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcc
Confidence 3788889999999999999999999999999998888776666555321
Q ss_pred -------------------------------hhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCC-CCCcH
Q 037410 60 -------------------------------RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANN-YGKTP 107 (161)
Q Consensus 60 -------------------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~-~~~t~ 107 (161)
...++..+..|.||||+|+..|+.+++++|++.|++ ++..+. .|.||
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tp 195 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTP 195 (282)
T ss_dssp ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCH
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCH
Confidence 012445677899999999999999999999999998 666664 59999
Q ss_pred HHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHHHHHHhh
Q 037410 108 LYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFILLSLTRY 156 (161)
Q Consensus 108 l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~~~l~~~ 156 (161)
||+|++.++.+++++|+++|++++.+|..|+||+|+| +...+.+.|.++
T Consensus 196 L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 247 (282)
T 1oy3_D 196 LHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHc
Confidence 9999999999999999999999999999999999996 455566666654
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=7.3e-27 Score=156.47 Aligned_cols=155 Identities=21% Similarity=0.171 Sum_probs=130.7
Q ss_pred ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhh
Q 037410 1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRM 65 (161)
Q Consensus 1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 65 (161)
|+.+++..+...+.+|..|+||||+|+..|+.+++++|++.|.+++..+..+.++++.. ...++.
T Consensus 22 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 101 (231)
T 3aji_A 22 LKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA 101 (231)
T ss_dssp HHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCC
Confidence 35678888888899999999999999999999999999999999888777776666432 123455
Q ss_pred hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410 66 ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ 145 (161)
Q Consensus 66 ~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~ 145 (161)
.+..|.||||+|+..++.+++++|++.|.+ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++.
T Consensus 102 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 180 (231)
T 3aji_A 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLAC 180 (231)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHH
Confidence 677899999999999999999999999988 7888889999999999999999999999999999999999999999863
Q ss_pred ---hHHHHHHHHhh
Q 037410 146 ---CTFILLSLTRY 156 (161)
Q Consensus 146 ---~~~~~~~l~~~ 156 (161)
...+.+.|.++
T Consensus 181 ~~~~~~~v~~Ll~~ 194 (231)
T 3aji_A 181 DEERVEEAKFLVTQ 194 (231)
T ss_dssp HTTCHHHHHHHHHT
T ss_pred HCCCHHHHHHHHHC
Confidence 34455555544
No 23
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=3e-27 Score=150.42 Aligned_cols=132 Identities=19% Similarity=0.202 Sum_probs=116.3
Q ss_pred hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc
Q 037410 3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN 82 (161)
Q Consensus 3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~ 82 (161)
.++ ..+..++.+|..|+||||+|+. |+.+++++|++.|.+++. .+..|.||||+|+..|+
T Consensus 23 ~Ll-~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 23 SLL-QNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL------------------KDRTGFAVIHDAARAGF 82 (162)
T ss_dssp HHT-TSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTC
T ss_pred HHH-hCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCC
Confidence 344 4567888999999999999999 999999999999887554 68899999999999999
Q ss_pred HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC-CCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410 83 VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ-CPMKAPTERQLCMLQQ---CTFILLSLTR 155 (161)
Q Consensus 83 ~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~t~l~~~~---~~~~~~~l~~ 155 (161)
.+++++|++.|++ ++.++..|.||||+|++.++.+++++|+++|++ ++.++..|+||++++. ...+.+.|.+
T Consensus 83 ~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 83 LDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 9999999999988 889999999999999999999999999999998 6999999999999964 3445555544
No 24
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=3e-27 Score=160.65 Aligned_cols=154 Identities=19% Similarity=0.164 Sum_probs=122.6
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh----------------hhhhh
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR----------------QMIRM 65 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~----------------~~~~~ 65 (161)
+.+++......+..|..|+||||+|+..|+.+++++|++.|.+++..+..+.++++..- ..++.
T Consensus 40 ~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 119 (253)
T 1yyh_A 40 SDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA 119 (253)
T ss_dssp ------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC
T ss_pred HHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 44555554444566899999999999999999999999999999988877777764321 13455
Q ss_pred hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH-
Q 037410 66 ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ- 144 (161)
Q Consensus 66 ~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~- 144 (161)
.+..|.||||+|+..++.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||+|+|
T Consensus 120 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 198 (253)
T 1yyh_A 120 RMHDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAA 198 (253)
T ss_dssp CCTTCCCHHHHHHHHTCSSHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCCcHHHHHHHcChHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 677899999999999999999999999988 888999999999999999999999999999999999999999999996
Q ss_pred --HhHHHHHHHHhh
Q 037410 145 --QCTFILLSLTRY 156 (161)
Q Consensus 145 --~~~~~~~~l~~~ 156 (161)
+...+.+.|.++
T Consensus 199 ~~~~~~~v~~Ll~~ 212 (253)
T 1yyh_A 199 REGSYETAKVLLDH 212 (253)
T ss_dssp HHTCHHHHHHHHHT
T ss_pred HCCCHHHHHHHHHc
Confidence 445566666554
No 25
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=2.2e-27 Score=155.11 Aligned_cols=93 Identities=24% Similarity=0.209 Sum_probs=82.2
Q ss_pred hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHH
Q 037410 63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCM 142 (161)
Q Consensus 63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 142 (161)
++..+..|.||||+|+..++.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 139 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLI 139 (192)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHH
T ss_pred cccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 556678899999999999999999999999988 7889999999999999999999999999999999999999999999
Q ss_pred HHHh---HHHHHHHHhh
Q 037410 143 LQQC---TFILLSLTRY 156 (161)
Q Consensus 143 ~~~~---~~~~~~l~~~ 156 (161)
+|.. ..+.+.|..+
T Consensus 140 ~A~~~~~~~~v~~Ll~~ 156 (192)
T 2rfm_A 140 VASKYGRSEIVKKLLEL 156 (192)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHC
Confidence 9643 4455555544
No 26
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=6.1e-27 Score=156.07 Aligned_cols=129 Identities=20% Similarity=0.217 Sum_probs=70.0
Q ss_pred cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh----------------hhhhhhcCCCccHHHHHH
Q 037410 15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR----------------QMIRMANNEKNTALHEAV 78 (161)
Q Consensus 15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~g~t~l~~a~ 78 (161)
.|..|+||||+|+..|+.+++++|++.|.+++..+..+.+++...- ...+..+..|.||||+|+
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 100 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 100 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHH
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHH
Confidence 3566666666666666666666666666665555544444432110 012233444555555555
Q ss_pred hcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410 79 CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ 144 (161)
Q Consensus 79 ~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~ 144 (161)
..++.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++
T Consensus 101 ~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 165 (223)
T 2f8y_A 101 RLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLA 165 (223)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred HhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHH
Confidence 55555555555555554 445555555555555555555555555555555555555555555553
No 27
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=3.2e-27 Score=157.86 Aligned_cols=147 Identities=14% Similarity=0.172 Sum_probs=113.6
Q ss_pred ccccc-cCCCCCcHHHHHHHhCCHHHHHHHHHhh--HhhhcCCCCCCCccchh---------------hhhhhhhcCCCc
Q 037410 10 SLLLN-VNAKGDTPLRVAAKFGHSDIVSVLVQTA--KIAQHGDGEPESGIGAD---------------RQMIRMANNEKN 71 (161)
Q Consensus 10 ~~~~~-~~~~g~t~lh~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~ 71 (161)
..++. .|..|+||||+|+..|+.+++++|++.| .+++..+..+.++++.. +..++.++..|.
T Consensus 62 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 141 (228)
T 2dzn_A 62 VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQ 141 (228)
T ss_dssp CCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCC
Confidence 33444 6777888888888888888888888887 66666555555554321 122455677889
Q ss_pred cHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHH-hcCCCCCCCCCcccchHHHHHhHHHH
Q 037410 72 TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL-ETAHQCPMKAPTERQLCMLQQCTFIL 150 (161)
Q Consensus 72 t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~~~t~l~~~~~~~~~ 150 (161)
||||+|+..|+.+++++|++.|..+++.++..|.||||+|+..++.+++++|+ ++|++++.+|..|+||++++....+.
T Consensus 142 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~~ 221 (228)
T 2dzn_A 142 IPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVK 221 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTTHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999984337888889999999999999999999999 88999999999999999988776666
Q ss_pred HHHHhh
Q 037410 151 LSLTRY 156 (161)
Q Consensus 151 ~~l~~~ 156 (161)
+.|.++
T Consensus 222 ~~l~~~ 227 (228)
T 2dzn_A 222 KFFLNN 227 (228)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 666553
No 28
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=1.2e-26 Score=154.63 Aligned_cols=152 Identities=20% Similarity=0.201 Sum_probs=125.4
Q ss_pred HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhH-hhhcCCCCCCCccchh---------------hhhhhhhcC
Q 037410 5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAK-IAQHGDGEPESGIGAD---------------RQMIRMANN 68 (161)
Q Consensus 5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 68 (161)
|...+..++.+|..|+||||+|+..|+.+++++|++.+. .++..+..+.+++... ...++..+.
T Consensus 44 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 123 (223)
T 2f8y_A 44 LLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD 123 (223)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC
Confidence 334567788888889999999999999999999998877 5666555555554321 123456688
Q ss_pred CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---
Q 037410 69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ--- 145 (161)
Q Consensus 69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~--- 145 (161)
.|.||||+|+..++.+++++|++.|++ ++.++..|.||||+|++.++.+++++|+++|++++.+|..|+||++++.
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 202 (223)
T 2f8y_A 124 LGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERM 202 (223)
T ss_dssp TSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhc
Confidence 899999999999999999999999988 8889999999999999999999999999999999999999999999964
Q ss_pred hHHHHHHHHhhh
Q 037410 146 CTFILLSLTRYS 157 (161)
Q Consensus 146 ~~~~~~~l~~~~ 157 (161)
...+.+.|.++.
T Consensus 203 ~~~i~~~L~~~g 214 (223)
T 2f8y_A 203 HHDIVRLLDEYN 214 (223)
T ss_dssp CHHHHHHHHHTT
T ss_pred chHHHHHHHHcC
Confidence 445666665543
No 29
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=3.4e-27 Score=146.42 Aligned_cols=122 Identities=22% Similarity=0.212 Sum_probs=108.5
Q ss_pred cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCC
Q 037410 15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGP 94 (161)
Q Consensus 15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~ 94 (161)
....+.||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..++.+++++|++.|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 71 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNA------------------KDEYGLTPLYLATAHGHLEIVEVLLKNGA 71 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 345688999999999999999999999887554 68899999999999999999999999998
Q ss_pred CCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410 95 DNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTR 155 (161)
Q Consensus 95 ~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~ 155 (161)
+ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+++|. ...+.+.|.+
T Consensus 72 ~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 72 D-VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp C-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred C-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 8 8889999999999999999999999999999999999999999999964 3445555544
No 30
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=5.6e-27 Score=157.38 Aligned_cols=137 Identities=22% Similarity=0.186 Sum_probs=113.2
Q ss_pred ChhHHHhCCc--cccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHH
Q 037410 1 MEEILELCPS--LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78 (161)
Q Consensus 1 ~~~ll~~~~~--~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~ 78 (161)
|+++|+.... ..+..+..+.||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~d~~g~tpLh~A~ 62 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQ------------------PNEEGITALHNAI 62 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTC------------------CCTTSCCHHHHHH
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCC------------------CCCCCCCHHHHHH
Confidence 4566665332 2344456788999999999999999999999987554 7889999999999
Q ss_pred hcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCC-CcccchHHHH-----HhHHHHHH
Q 037410 79 CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKA-PTERQLCMLQ-----QCTFILLS 152 (161)
Q Consensus 79 ~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~l~~~-----~~~~~~~~ 152 (161)
..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++..+ ..|+||++++ +...+.+.
T Consensus 63 ~~g~~~~v~~Ll~~ga~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~ 141 (229)
T 2vge_A 63 CGANYSIVDFLITAGAN-VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATY 141 (229)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHH
Confidence 99999999999999998 88999999999999999999999999999999999986 6999999998 66667776
Q ss_pred HHhh
Q 037410 153 LTRY 156 (161)
Q Consensus 153 l~~~ 156 (161)
|..+
T Consensus 142 Ll~~ 145 (229)
T 2vge_A 142 LADV 145 (229)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 6654
No 31
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=6.2e-27 Score=157.35 Aligned_cols=140 Identities=25% Similarity=0.255 Sum_probs=110.7
Q ss_pred HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhh-HhhhcCCCCCCCccchh---------------hhhhhhhcC
Q 037410 5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTA-KIAQHGDGEPESGIGAD---------------RQMIRMANN 68 (161)
Q Consensus 5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 68 (161)
|...+..++.++..|.||||+|+..|+.+++++|++.+ ..++..+..+.+++... ...++..+.
T Consensus 63 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 142 (237)
T 3b7b_A 63 LIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDN 142 (237)
T ss_dssp HHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCC
Confidence 33456666777777777777777777777777777776 45555554444443221 122345678
Q ss_pred CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410 69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ 145 (161)
Q Consensus 69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~ 145 (161)
.|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|++.++.+++++|+++|++++.+|..|+||++++.
T Consensus 143 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 218 (237)
T 3b7b_A 143 EENICLHWAAFSGCVDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCAS 218 (237)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 899999999999999999999999988 7888999999999999999999999999999999999999999999853
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=2.8e-26 Score=153.26 Aligned_cols=153 Identities=20% Similarity=0.182 Sum_probs=124.8
Q ss_pred ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhh--Hhhhc-CCCCCCCccchh---------------h--
Q 037410 1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTA--KIAQH-GDGEPESGIGAD---------------R-- 60 (161)
Q Consensus 1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~--~~~~~-~~~~~~~~~~~~---------------~-- 60 (161)
|+.+++..+...+.+|..|+||||+|+..|+.+++++|++.| .+++. .+..+.+++... .
T Consensus 18 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 97 (228)
T 2dzn_A 18 VQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLK 97 (228)
T ss_dssp HHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSC
T ss_pred HHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 356777877777779999999999999999999999999999 44444 444555554321 1
Q ss_pred hhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC-CCCCCCCCcccc
Q 037410 61 QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA-HQCPMKAPTERQ 139 (161)
Q Consensus 61 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t 139 (161)
..++..+..|.||||+|+..++.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++| ++++.+|..|+|
T Consensus 98 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t 176 (228)
T 2dzn_A 98 PDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT 176 (228)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCC
T ss_pred cccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCC
Confidence 33455577899999999999999999999999988 7888999999999999999999999999999 999999999999
Q ss_pred hHHHHH---hHHHHHHHH
Q 037410 140 LCMLQQ---CTFILLSLT 154 (161)
Q Consensus 140 ~l~~~~---~~~~~~~l~ 154 (161)
|+|++. ...+...|.
T Consensus 177 ~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 177 PLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHH
Confidence 999864 344555555
No 33
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=1.4e-26 Score=157.51 Aligned_cols=132 Identities=20% Similarity=0.146 Sum_probs=112.1
Q ss_pred hCCccccc----cCCCCCcHHHHHHHh---CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHh
Q 037410 7 LCPSLLLN----VNAKGDTPLRVAAKF---GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVC 79 (161)
Q Consensus 7 ~~~~~~~~----~~~~g~t~lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~ 79 (161)
..+..++. +|..|+||||+|+.. |+.+++++|++.|++.+..+.. ........+..|.||||+|+.
T Consensus 27 ~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~-------~~~~~~~~d~~g~t~L~~A~~ 99 (256)
T 2etb_A 27 WNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL-------VNAQCTDEFYQGHSALHIAIE 99 (256)
T ss_dssp HHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG-------GGCCCCSTTTTTCCHHHHHHH
T ss_pred HcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh-------cccccccccccCCCHHHHHHH
Confidence 45677787 899999999999999 9999999999999987642200 000011235679999999999
Q ss_pred cCcHHHHHHHHHcCCCCccccCCC-------------CCcHHHHHHhCCChHHHHHHHh---cCCCCCCCCCcccchHHH
Q 037410 80 HGNVHVVKILTKQGPDNPYSANNY-------------GKTPLYMAAKGRYSEMVIELLE---TAHQCPMKAPTERQLCML 143 (161)
Q Consensus 80 ~~~~~~~~~L~~~g~~~~~~~~~~-------------~~t~l~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~t~l~~ 143 (161)
.|+.+++++|++.|++ ++..+.. |.||||+|+..|+.+++++|++ +|++++.+|..|+||||+
T Consensus 100 ~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~ 178 (256)
T 2etb_A 100 KRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHA 178 (256)
T ss_dssp TTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHH
T ss_pred cCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHH
Confidence 9999999999999998 7777765 9999999999999999999999 999999999999999999
Q ss_pred HHh
Q 037410 144 QQC 146 (161)
Q Consensus 144 ~~~ 146 (161)
+..
T Consensus 179 A~~ 181 (256)
T 2etb_A 179 LVM 181 (256)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 34
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=6.8e-27 Score=160.62 Aligned_cols=122 Identities=24% Similarity=0.217 Sum_probs=100.3
Q ss_pred CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc-CCCccHHHHHHhcCcHHHH
Q 037410 8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN-NEKNTALHEAVCHGNVHVV 86 (161)
Q Consensus 8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~ 86 (161)
.+..++.+|..|+||||+|+..|+.+++++|++.|.+++. .+ ..|.||||+|+..|+.+++
T Consensus 147 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~~g~tpL~~A~~~~~~~~v 208 (282)
T 1oy3_D 147 WRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK------------------PEPTCGRTPLHLAVEAQAASVL 208 (282)
T ss_dssp GGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC------------------CCTTTCCCHHHHHHHTTCHHHH
T ss_pred hhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCcCHHHHHHHcCCHHHH
Confidence 3456788899999999999999999999999999988665 44 4599999999999999999
Q ss_pred HHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHH
Q 037410 87 KILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTF 148 (161)
Q Consensus 87 ~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~ 148 (161)
++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.++..|.||++++....
T Consensus 209 ~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 209 ELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC--------------
T ss_pred HHHHHcCCC-CcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence 999999998 8899999999999999999999999999999999999999999999876543
No 35
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=4.3e-26 Score=139.14 Aligned_cols=119 Identities=30% Similarity=0.417 Sum_probs=107.3
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCc
Q 037410 18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNP 97 (161)
Q Consensus 18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~ 97 (161)
+|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..++.+++++|++.|++ +
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~ 61 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGAD-V 61 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-T
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-C
Confidence 589999999999999999999999887554 678899999999999999999999999988 7
Q ss_pred cccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHh
Q 037410 98 YSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLTR 155 (161)
Q Consensus 98 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~ 155 (161)
+.++..|.||||+|+..++.+++++|+++|++++.+|..|+||++++.. ..+.+.|.+
T Consensus 62 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999743 445555444
No 36
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.94 E-value=2.8e-27 Score=157.89 Aligned_cols=126 Identities=21% Similarity=0.179 Sum_probs=111.6
Q ss_pred cccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHc
Q 037410 13 LNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQ 92 (161)
Q Consensus 13 ~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~ 92 (161)
+..+..|.||||+||..|+.+++++|++.|.+++. ++..|.||||+|+..|+.+++++|++.
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 128 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG------------------LDKAGSTALYWACHGGHKDIVEMLFTQ 128 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHTTS
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHHHcC
Confidence 34566789999999999999999999999887554 688999999999999999999999999
Q ss_pred -CCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHHHHHHhhh
Q 037410 93 -GPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLTRYS 157 (161)
Q Consensus 93 -g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~l~~~~ 157 (161)
|++ ++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|.......++....
T Consensus 129 ~g~~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~ 193 (222)
T 3ehr_A 129 PNIE-LNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQ 193 (222)
T ss_dssp TTCC-CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---
T ss_pred CCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHh
Confidence 776 8899999999999999999999999999999999999999999999976666666655543
No 37
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=6.3e-26 Score=152.64 Aligned_cols=148 Identities=22% Similarity=0.187 Sum_probs=114.8
Q ss_pred hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------h------h----hhhhhc
Q 037410 7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------R------Q----MIRMAN 67 (161)
Q Consensus 7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------~------~----~~~~~~ 67 (161)
..+..++.+|..|+||||+|+..|+.+++++|++.|.+++..+..+..++... . . .++..+
T Consensus 34 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 113 (241)
T 1k1a_A 34 QGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARN 113 (241)
T ss_dssp HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCC
T ss_pred hcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccC
Confidence 46778888899999999999999999999999999988888777666665321 0 0 344556
Q ss_pred CCCccHHHHHHhcCcHHHHHHHHHcCCCCccccC-CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH-
Q 037410 68 NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSAN-NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ- 145 (161)
Q Consensus 68 ~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~-~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~- 145 (161)
..|.||||+|+..++.+++++|++.|++ ++..+ ..|.||||+|++.++.+++++|+++|++++.++..|+||+|++.
T Consensus 114 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 192 (241)
T 1k1a_A 114 YDGLTALHVAVNTECQETVQLLLERGAD-IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASG 192 (241)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHcCCC-cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 7788888888888888888888888877 56666 67888888888888888888888888888888888888888853
Q ss_pred --hHHHHHHHHh
Q 037410 146 --CTFILLSLTR 155 (161)
Q Consensus 146 --~~~~~~~l~~ 155 (161)
...+.+.|.+
T Consensus 193 ~~~~~~v~~Ll~ 204 (241)
T 1k1a_A 193 RGLLPLVRTLVR 204 (241)
T ss_dssp HTCHHHHHHHHH
T ss_pred cCCHHHHHHHHh
Confidence 3344444444
No 38
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=1.1e-26 Score=156.19 Aligned_cols=146 Identities=21% Similarity=0.229 Sum_probs=120.6
Q ss_pred cccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh---------------------hhhhhhcCC
Q 037410 11 LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR---------------------QMIRMANNE 69 (161)
Q Consensus 11 ~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~ 69 (161)
.++.+|..|+||||+|+..|+.+++++|++.|.+++..+..+.++++..- ...+..+..
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN 116 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCC
Confidence 57777888888888888888888888888888887777766666653210 113556778
Q ss_pred CccHHHHHHhcCcHHHHHHHHHcCCCCccccCC-CCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---H
Q 037410 70 KNTALHEAVCHGNVHVVKILTKQGPDNPYSANN-YGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---Q 145 (161)
Q Consensus 70 g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~ 145 (161)
|.||||+|+..|+.+++++|++.|++ ++.++. .|.||||+|+..++.+++++|+++|++++.+|..|+||++++ +
T Consensus 117 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRP 195 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccC
Confidence 99999999999999999999999998 778887 999999999999999999999999999999999999999985 4
Q ss_pred hHHHHHHHHhhh
Q 037410 146 CTFILLSLTRYS 157 (161)
Q Consensus 146 ~~~~~~~l~~~~ 157 (161)
...+.+.|..+.
T Consensus 196 ~~~~~~~Ll~~g 207 (236)
T 1ikn_D 196 STRIQQQLGQLT 207 (236)
T ss_dssp CHHHHHHHHTTS
T ss_pred chHHHHHHHHcc
Confidence 556666666554
No 39
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=1e-26 Score=161.16 Aligned_cols=139 Identities=22% Similarity=0.177 Sum_probs=112.9
Q ss_pred HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh---------hhh------------
Q 037410 5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR---------QMI------------ 63 (161)
Q Consensus 5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~~------------ 63 (161)
|...+++++.+|..|+||||+|+..|+.+++++|+++|.+++..+..+.+++.... ..+
T Consensus 92 Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~ 171 (299)
T 1s70_B 92 LVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARK 171 (299)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhh
Confidence 33456777777777888888888888888888888877777766666655543210 000
Q ss_pred ---------------------hhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHH
Q 037410 64 ---------------------RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIE 122 (161)
Q Consensus 64 ---------------------~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ 122 (161)
...+..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++
T Consensus 172 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpL~~A~~~~~~~~v~~ 250 (299)
T 1s70_B 172 EEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRI 250 (299)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHhcCCHHHHHH
Confidence 01345799999999999999999999999988 88999999999999999999999999
Q ss_pred HHhcCCCCCCCCCcccchHHHH
Q 037410 123 LLETAHQCPMKAPTERQLCMLQ 144 (161)
Q Consensus 123 Ll~~g~~~~~~~~~~~t~l~~~ 144 (161)
|+++|++++.+|..|+||+++|
T Consensus 251 Ll~~gad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 251 LVENLCDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp HHHTTCCTTCCCTTSCCTTTSC
T ss_pred HHHcCCCCCCcCCCCCCHHHHH
Confidence 9999999999999999999986
No 40
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=1e-26 Score=156.46 Aligned_cols=153 Identities=14% Similarity=0.173 Sum_probs=125.1
Q ss_pred HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhH----hhhcCCCCCCCccchh---------------hhhhh
Q 037410 4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAK----IAQHGDGEPESGIGAD---------------RQMIR 64 (161)
Q Consensus 4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~~~~~~~~---------------~~~~~ 64 (161)
+|...+..++.+|..|+||||+|+..|+.+++++|++.+. .++..+..+..++... ...++
T Consensus 64 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 143 (241)
T 1k1a_A 64 LLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADID 143 (241)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 3445678888888899999999999999999999999887 5555555555554321 12233
Q ss_pred hhc-CCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410 65 MAN-NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCML 143 (161)
Q Consensus 65 ~~~-~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~ 143 (161)
..+ ..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||+++
T Consensus 144 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 222 (241)
T 1k1a_A 144 AVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMV 222 (241)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTT
T ss_pred cccccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHH
Confidence 445 6799999999999999999999999998 88999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhhh
Q 037410 144 QQCTFILLSLTRYS 157 (161)
Q Consensus 144 ~~~~~~~~~l~~~~ 157 (161)
|........+....
T Consensus 223 A~~~~~~~i~~~l~ 236 (241)
T 1k1a_A 223 ARSRRVIDILRGKA 236 (241)
T ss_dssp CSSHHHHHHHTC--
T ss_pred HHhcCcHHHHhhhc
Confidence 77766666655443
No 41
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=1.2e-25 Score=154.21 Aligned_cols=121 Identities=24% Similarity=0.289 Sum_probs=105.1
Q ss_pred ccCCCCCcHHHHHHHh---CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhh----hhhcCCCccHHHHHHhcCcHHHH
Q 037410 14 NVNAKGDTPLRVAAKF---GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI----RMANNEKNTALHEAVCHGNVHVV 86 (161)
Q Consensus 14 ~~~~~g~t~lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~t~l~~a~~~~~~~~~ 86 (161)
..|..|+||||+|+.. |+.+++++|++.|+..... ...+ ...+..|.||||+|+..|+.+++
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~-----------~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v 117 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL-----------KQFVNASYTDSYYKGQTALHIAIERRNMTLV 117 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH-----------HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHH
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch-----------hHHhhcccccccCCCCCHHHHHHHcCCHHHH
Confidence 4588999999999987 9999999999999864320 0011 12467899999999999999999
Q ss_pred HHHHHcCCCCccccCC--------------CCCcHHHHHHhCCChHHHHHHHh---cCCCCCCCCCcccchHHHHHh
Q 037410 87 KILTKQGPDNPYSANN--------------YGKTPLYMAAKGRYSEMVIELLE---TAHQCPMKAPTERQLCMLQQC 146 (161)
Q Consensus 87 ~~L~~~g~~~~~~~~~--------------~~~t~l~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~t~l~~~~~ 146 (161)
++|++.|++ ++..+. .|.||||+|+..|+.+++++|++ +|++++.+|..|+||||++..
T Consensus 118 ~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~ 193 (273)
T 2pnn_A 118 TLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVE 193 (273)
T ss_dssp HHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHH
Confidence 999999998 777776 79999999999999999999999 999999999999999999765
No 42
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=1e-26 Score=147.37 Aligned_cols=114 Identities=18% Similarity=0.198 Sum_probs=85.1
Q ss_pred ccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHH
Q 037410 12 LLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTK 91 (161)
Q Consensus 12 ~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~ 91 (161)
.+..+..|.||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+ .|+.+++++|++
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~-~~~~~~v~~Ll~ 65 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNA------------------PNSYGRRPIQVMM-MGSARVAELLLL 65 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTC------------------CCSSSCCTTTSSC-TTCHHHHHHHHT
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHH-cCCHHHHHHHHH
Confidence 345677899999999999999999999999887665 5667777777764 677777777777
Q ss_pred cCCCCccccCCCCCc-HHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410 92 QGPDNPYSANNYGKT-PLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ 145 (161)
Q Consensus 92 ~g~~~~~~~~~~~~t-~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~ 145 (161)
.|++ ++.++..|.| |||+|+..++.+++++|+++|++++.+|..|+||+|++.
T Consensus 66 ~g~~-~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 119 (156)
T 1bi7_B 66 HGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAE 119 (156)
T ss_dssp TTCC-CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHH
T ss_pred cCCC-CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 7766 6677777777 777777777777777777777777777777777777753
No 43
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=3.1e-26 Score=158.29 Aligned_cols=95 Identities=17% Similarity=0.117 Sum_probs=68.1
Q ss_pred hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHH
Q 037410 63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCM 142 (161)
Q Consensus 63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 142 (161)
++..+..|.||||+|+..|+.+++++|++.|++ ++ .+..|.||||+|++.++.+++++|+++|++++.+|..|+||++
T Consensus 183 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~ 260 (285)
T 3d9h_A 183 IDHKISHLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVE 260 (285)
T ss_dssp TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-TT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 345566777888888888888888888877776 44 3677778888888888888888888888888888888888887
Q ss_pred HHH-hHHHHHHHHhhhCC
Q 037410 143 LQQ-CTFILLSLTRYSGI 159 (161)
Q Consensus 143 ~~~-~~~~~~~l~~~~~~ 159 (161)
++. ...+...|.++.+.
T Consensus 261 ~A~~~~~~~~~Ll~~~~a 278 (285)
T 3d9h_A 261 LVPPESPLAQLFLEREGA 278 (285)
T ss_dssp GSCTTSHHHHHHHHHC--
T ss_pred HhcCccHHHHHHHHhhcc
Confidence 742 34555666655443
No 44
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=3.4e-27 Score=153.74 Aligned_cols=126 Identities=12% Similarity=0.034 Sum_probs=107.7
Q ss_pred ccccC-CCCCcHHHHHHHhCCH----HHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc----
Q 037410 12 LLNVN-AKGDTPLRVAAKFGHS----DIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN---- 82 (161)
Q Consensus 12 ~~~~~-~~g~t~lh~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~---- 82 (161)
.+.++ ..|+||||+|+..|+. +++++|++.|++++. ++..|.||||+|+..++
T Consensus 30 ~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~------------------~d~~g~TpLh~a~~~~~~~~~ 91 (186)
T 3t8k_A 30 YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS------------------RTKEGTTLFFPLFQGGGNDIT 91 (186)
T ss_dssp SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC------------------CCTTCCCTHHHHHHHCTTCHH
T ss_pred cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC------------------CCCCCCcHHHHHHHcCCcchh
Confidence 44555 6799999999999975 589999999999665 78999999999998886
Q ss_pred --HHHHHHHHHcCCCCccccCCCCC-cHHHHHHhCCC-----hHHHHHHHh-cCCCCCCCCCcccchHHHHH---hHHHH
Q 037410 83 --VHVVKILTKQGPDNPYSANNYGK-TPLYMAAKGRY-----SEMVIELLE-TAHQCPMKAPTERQLCMLQQ---CTFIL 150 (161)
Q Consensus 83 --~~~~~~L~~~g~~~~~~~~~~~~-t~l~~A~~~~~-----~~~~~~Ll~-~g~~~~~~~~~~~t~l~~~~---~~~~~ 150 (161)
.+++++|++.|++ ++.+|..|. ||||+|+..+. .+++++|++ +|++++.+|..|+||+|++. .....
T Consensus 92 ~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v 170 (186)
T 3t8k_A 92 GTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIAL 170 (186)
T ss_dssp HHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHH
T ss_pred hHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHH
Confidence 6889999999998 899999999 99999999654 458999999 99999999999999999963 34455
Q ss_pred HHHHhh
Q 037410 151 LSLTRY 156 (161)
Q Consensus 151 ~~l~~~ 156 (161)
+.|..|
T Consensus 171 ~~L~~~ 176 (186)
T 3t8k_A 171 KMMEDY 176 (186)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 45
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=9e-26 Score=151.30 Aligned_cols=139 Identities=15% Similarity=0.096 Sum_probs=115.4
Q ss_pred cccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHc
Q 037410 13 LNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQ 92 (161)
Q Consensus 13 ~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~ 92 (161)
+.+|..|+||||+|+..|+.+++++|++.|.+++..+...... ...+..+..|.||||+|+..|+.+++++|++.
T Consensus 69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 143 (232)
T 2rfa_A 69 TSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFH-----YRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH 143 (232)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS-----CCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT
T ss_pred cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCccee-----ecccccccCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 5667799999999999999999999999999877643221110 11233466899999999999999999999999
Q ss_pred CCCCccccCCCCCcHHHHHHhCCChHHH----HHHHhcCCCC------CCCCCcccchHHHHH---hHHHHHHHHhhh
Q 037410 93 GPDNPYSANNYGKTPLYMAAKGRYSEMV----IELLETAHQC------PMKAPTERQLCMLQQ---CTFILLSLTRYS 157 (161)
Q Consensus 93 g~~~~~~~~~~~~t~l~~A~~~~~~~~~----~~Ll~~g~~~------~~~~~~~~t~l~~~~---~~~~~~~l~~~~ 157 (161)
|++ ++.+|..|.||||+|+..++.+++ ++|+++|++. +.+|..|+||+++|. ...+.+.|.++.
T Consensus 144 ga~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 144 GAD-IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp TCC-TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCC-CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 998 889999999999999999999988 9999999988 589999999999964 455666666554
No 46
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=4.6e-26 Score=157.43 Aligned_cols=120 Identities=18% Similarity=0.201 Sum_probs=79.3
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
.++|... .++.+|..|+||||+|+..|+.+++++|++.|.+++.. +|.||||+|+..|
T Consensus 16 ~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--------------------~g~t~L~~A~~~g 73 (285)
T 3kea_A 16 KSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--------------------ENEFPLHQAATLE 73 (285)
T ss_dssp HHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--------------------TTCCHHHHHTTSS
T ss_pred HHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--------------------CCCCHHHHHHHcC
Confidence 4555544 57899999999999999999999999999999987653 2455555555555
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcc-cchHHHH
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTE-RQLCMLQ 144 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~-~t~l~~~ 144 (161)
+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|++++.++..| +||+|++
T Consensus 74 ~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A 136 (285)
T 3kea_A 74 DTKIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHA 136 (285)
T ss_dssp SCHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHH
T ss_pred CHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Confidence 55555555555554 44555555555555555555555555555555555555555 4555553
No 47
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=2.6e-25 Score=151.76 Aligned_cols=151 Identities=17% Similarity=0.175 Sum_probs=120.2
Q ss_pred hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh---------hhhh-----hhcC
Q 037410 3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR---------QMIR-----MANN 68 (161)
Q Consensus 3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~~~-----~~~~ 68 (161)
.++ ..+.+++.+|..|+||||+|+..|+.+++++|++.|.+++..+..+.+++...- .++. ..+.
T Consensus 21 ~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 99 (261)
T 2xai_A 21 NLI-SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES 99 (261)
T ss_dssp HHH-HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC
T ss_pred HHH-HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 344 457788999999999999999999999999999999998887777766654321 1111 1244
Q ss_pred CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---H
Q 037410 69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---Q 145 (161)
Q Consensus 69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~ 145 (161)
.|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++. +..|+||+|++ +
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~ 177 (261)
T 2xai_A 100 DLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTA 177 (261)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcC
Confidence 588999999999999999999999887 788888899999999999999999999999988885 78889999986 4
Q ss_pred hHHHHHHHHhh
Q 037410 146 CTFILLSLTRY 156 (161)
Q Consensus 146 ~~~~~~~l~~~ 156 (161)
...+.+.|.++
T Consensus 178 ~~~~v~~Ll~~ 188 (261)
T 2xai_A 178 SEELACLLMDF 188 (261)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHc
Confidence 44556666554
No 48
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=9e-26 Score=153.72 Aligned_cols=131 Identities=21% Similarity=0.208 Sum_probs=108.5
Q ss_pred hCCccccccC----CCCCcHHHHHH---HhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHh
Q 037410 7 LCPSLLLNVN----AKGDTPLRVAA---KFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVC 79 (161)
Q Consensus 7 ~~~~~~~~~~----~~g~t~lh~A~---~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~ 79 (161)
..+..++..+ ..|+||||+|+ ..|+.+++++|++.|....... ..........+..|.||||+|+.
T Consensus 30 ~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~-------~~~~~~~~~~d~~g~t~L~~A~~ 102 (260)
T 3jxi_A 30 THKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR-------EFINSPFRDVYYRGQTALHIAIE 102 (260)
T ss_dssp HHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH-------HHHTCCBCCSSEESBCHHHHHHH
T ss_pred hcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH-------hhhcccccccccCCCCHHHHHHH
Confidence 3455666555 77999999999 7899999999999998743200 00001122345689999999999
Q ss_pred cCcHHHHHHHHHcCCCCccccC--------------CCCCcHHHHHHhCCChHHHHHHHh---cCCCCCCCCCcccchHH
Q 037410 80 HGNVHVVKILTKQGPDNPYSAN--------------NYGKTPLYMAAKGRYSEMVIELLE---TAHQCPMKAPTERQLCM 142 (161)
Q Consensus 80 ~~~~~~~~~L~~~g~~~~~~~~--------------~~~~t~l~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~t~l~ 142 (161)
.|+.+++++|++.|++ ++..+ ..|.||||+|+..|+.+++++|++ +|++++.+|..|+||||
T Consensus 103 ~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh 181 (260)
T 3jxi_A 103 RRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLH 181 (260)
T ss_dssp TTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHH
T ss_pred cCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHH
Confidence 9999999999999998 77777 689999999999999999999999 99999999999999999
Q ss_pred HHH
Q 037410 143 LQQ 145 (161)
Q Consensus 143 ~~~ 145 (161)
++.
T Consensus 182 ~A~ 184 (260)
T 3jxi_A 182 ALV 184 (260)
T ss_dssp HHH
T ss_pred HHH
Confidence 976
No 49
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.94 E-value=8.2e-26 Score=131.42 Aligned_cols=93 Identities=34% Similarity=0.524 Sum_probs=86.3
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCc
Q 037410 18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNP 97 (161)
Q Consensus 18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~ 97 (161)
+|+||||+|+..|+.+++++|++.|.+++. ++..|.||||+|+..++.+++++|++.|++ +
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~ 61 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGAD-V 61 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-C
Confidence 489999999999999999999999988654 788999999999999999999999999998 8
Q ss_pred cccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410 98 YSANNYGKTPLYMAAKGRYSEMVIELLETAHQ 129 (161)
Q Consensus 98 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~ 129 (161)
+.+|..|.||||+|+..++.+++++|+++|++
T Consensus 62 ~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 89999999999999999999999999999974
No 50
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=2.1e-26 Score=149.59 Aligned_cols=111 Identities=23% Similarity=0.202 Sum_probs=102.2
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCC
Q 037410 16 NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD 95 (161)
Q Consensus 16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~ 95 (161)
+..|+||||+|+..|+.+++++|++ |.+++ .++..|.||||+|+..|+.+++++|++.|++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~------------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 101 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVD------------------AVDENGRTALLFVAGLGSDKCVRLLAEAGAD 101 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTT------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCC------------------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5578999999999999999999999 76644 3788999999999999999999999999998
Q ss_pred CccccC-CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh
Q 037410 96 NPYSAN-NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC 146 (161)
Q Consensus 96 ~~~~~~-~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~ 146 (161)
++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++..
T Consensus 102 -~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 102 -LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 152 (183)
T ss_dssp -TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred -CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHH
Confidence 77777 889999999999999999999999999999999999999998743
No 51
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=3.5e-25 Score=151.12 Aligned_cols=152 Identities=22% Similarity=0.139 Sum_probs=124.6
Q ss_pred HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccch---------------hhhhhhhhcC
Q 037410 4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA---------------DRQMIRMANN 68 (161)
Q Consensus 4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 68 (161)
+|...+++++.+|..|+||||+|+..|+.+++++|++.|.+++..+ .+.++++. ....++..+.
T Consensus 54 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 132 (261)
T 2xai_A 54 ILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKIS 132 (261)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBT
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCC
Confidence 3445578899999999999999999999999999999998877533 24444321 1233566788
Q ss_pred CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH-hH
Q 037410 69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ-CT 147 (161)
Q Consensus 69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~-~~ 147 (161)
.|.||||+|+..|+.+++++|++.|++ ++ .+..|.||||+|++.++.+++++|+++|++++.+|..|+||++++. ..
T Consensus 133 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~ 210 (261)
T 2xai_A 133 HLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES 210 (261)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHHTCC-TT-CCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCC-CC-CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc
Confidence 999999999999999999999999998 55 4889999999999999999999999999999999999999999953 33
Q ss_pred HHHHHHHhhhC
Q 037410 148 FILLSLTRYSG 158 (161)
Q Consensus 148 ~~~~~l~~~~~ 158 (161)
.+...|..+.+
T Consensus 211 ~~~~~ll~~~~ 221 (261)
T 2xai_A 211 PLAQLFLEREG 221 (261)
T ss_dssp THHHHHHHC-C
T ss_pred cHHHHHHhccC
Confidence 35555555433
No 52
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=1.1e-25 Score=158.63 Aligned_cols=128 Identities=20% Similarity=0.202 Sum_probs=117.6
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
+.++...+..++.+|..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..|
T Consensus 41 ~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~g 102 (351)
T 3utm_A 41 MALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHA------------------KDKGGLVPLHNACSYG 102 (351)
T ss_dssp HHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTT
T ss_pred HHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCcHHHHHHHCC
Confidence 4667777888999999999999999999999999999999988654 7889999999999999
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHH
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTF 148 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~ 148 (161)
+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++..+..|.+|++++....
T Consensus 103 ~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~ 168 (351)
T 3utm_A 103 HYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPE 168 (351)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHH
T ss_pred CHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhh
Confidence 99999999999998 7889999999999999999999999999999999999999999999854433
No 53
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=5.1e-26 Score=154.68 Aligned_cols=136 Identities=16% Similarity=0.067 Sum_probs=111.0
Q ss_pred cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHH---
Q 037410 15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTK--- 91 (161)
Q Consensus 15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~--- 91 (161)
+|..|+||||+|+..|+.+++++|++.|++++..+...... ......+..|.||||+|+..|+.+++++|++
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~-----~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQ-----KHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS-----CCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccc-----ccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 34679999999999999999999999999877643221100 0011123349999999999999999999999
Q ss_pred cCCCCccccCCCCCcHHHHHHh--CCChH-------HHHHHHhcCCCC-------CCCCCcccchHHHHH---hHHHHHH
Q 037410 92 QGPDNPYSANNYGKTPLYMAAK--GRYSE-------MVIELLETAHQC-------PMKAPTERQLCMLQQ---CTFILLS 152 (161)
Q Consensus 92 ~g~~~~~~~~~~~~t~l~~A~~--~~~~~-------~~~~Ll~~g~~~-------~~~~~~~~t~l~~~~---~~~~~~~ 152 (161)
.|++ ++.+|..|.||||+|+. .++.+ ++++|+++|+++ +.+|..|+||+|+|. ...+.+.
T Consensus 161 ~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 239 (256)
T 2etb_A 161 QPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRH 239 (256)
T ss_dssp CCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHH
Confidence 8888 88999999999999999 78888 999999999999 899999999999964 4455666
Q ss_pred HHhh
Q 037410 153 LTRY 156 (161)
Q Consensus 153 l~~~ 156 (161)
|.++
T Consensus 240 Ll~~ 243 (256)
T 2etb_A 240 ILQR 243 (256)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 6554
No 54
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=3.1e-26 Score=154.60 Aligned_cols=129 Identities=23% Similarity=0.156 Sum_probs=106.4
Q ss_pred hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHH
Q 037410 7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVV 86 (161)
Q Consensus 7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 86 (161)
..++.++. +..|.||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..|+.+++
T Consensus 26 ~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~g~~~~v 86 (239)
T 1ycs_B 26 AHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL------------------PNDEGITALHNAVCAGHTEIV 86 (239)
T ss_dssp ------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCC------------------CCTTSCCHHHHHHHHTCHHHH
T ss_pred ccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHH
Confidence 44555554 47789999999999999999999999987554 788999999999999999999
Q ss_pred HHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCccc-chHHHH-----HhHHHHHHHHh
Q 037410 87 KILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTER-QLCMLQ-----QCTFILLSLTR 155 (161)
Q Consensus 87 ~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~-t~l~~~-----~~~~~~~~l~~ 155 (161)
++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++.++..|. ||+|++ +...+.+.|..
T Consensus 87 ~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 87 KFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp HHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred HHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence 999999998 889999999999999999999999999999999999998887 999986 33445555544
No 55
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=9.3e-27 Score=147.58 Aligned_cols=121 Identities=16% Similarity=0.190 Sum_probs=95.6
Q ss_pred hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCcc-HHHHHHhcC
Q 037410 3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNT-ALHEAVCHG 81 (161)
Q Consensus 3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t-~l~~a~~~~ 81 (161)
.|+ ..+..++.+|..|+||||+|+ .|+.+++++|++.|.+++. ++..|.| |||+|+..|
T Consensus 30 ~Ll-~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~------------------~d~~g~ttpL~~A~~~~ 89 (156)
T 1bi7_B 30 ALL-EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC------------------ADPATLTRPVHDAAREG 89 (156)
T ss_dssp HHH-TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC------------------CCTTTCCCHHHHHHHHT
T ss_pred HHH-HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHHCC
Confidence 344 457889999999999999985 9999999999999987554 7888998 999999999
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ 144 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~ 144 (161)
+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.++..|.||.+.+
T Consensus 90 ~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 90 FLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 99999999999998 889999999999999999999999999999999999999999998743
No 56
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.93 E-value=2.3e-26 Score=138.72 Aligned_cols=109 Identities=28% Similarity=0.322 Sum_probs=100.3
Q ss_pred ccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcC
Q 037410 14 NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQG 93 (161)
Q Consensus 14 ~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g 93 (161)
.+|.+|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..++.+++++|++.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~~~~~~~~~Ll~~g 65 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA------------------RSKDGNTPLHLAAKNGHAEIVKLLLAKG 65 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC------------------CCSSSCCTTHHHHTTTCHHHHHHHTTTT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 5788999999999999999999999999887554 7889999999999999999999999999
Q ss_pred CCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchH
Q 037410 94 PDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLC 141 (161)
Q Consensus 94 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l 141 (161)
++ ++.++..|.|||++|+..++.+++++|+++|++++.++..+.+|-
T Consensus 66 ~~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 66 AD-VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp CC-TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CC-CcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 98 888999999999999999999999999999999999999999875
No 57
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=3.8e-26 Score=155.59 Aligned_cols=140 Identities=18% Similarity=0.100 Sum_probs=111.0
Q ss_pred ccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHH
Q 037410 12 LLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTK 91 (161)
Q Consensus 12 ~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~ 91 (161)
.+..|..|+||||+|+..|+.+++++|++.|++++..+..... ........+..|.||||+|+..|+.+++++|++
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~----~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFF----QPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCC----SSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccccc----CcccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 4455668999999999999999999999999987763210000 000001112679999999999999999999999
Q ss_pred ---cCCCCccccCCCCCcHHHHHHhCCC---------hHHHHHHHhcCCCC-------CCCCCcccchHHHHH---hHHH
Q 037410 92 ---QGPDNPYSANNYGKTPLYMAAKGRY---------SEMVIELLETAHQC-------PMKAPTERQLCMLQQ---CTFI 149 (161)
Q Consensus 92 ---~g~~~~~~~~~~~~t~l~~A~~~~~---------~~~~~~Ll~~g~~~-------~~~~~~~~t~l~~~~---~~~~ 149 (161)
.|++ ++.+|..|.||||+|+..++ .+++++|+++|+++ +.+|..|+||||+|. ...+
T Consensus 162 ~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 162 NGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp CSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred ccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 8888 88999999999999998777 68999999999988 679999999999964 4455
Q ss_pred HHHHHhh
Q 037410 150 LLSLTRY 156 (161)
Q Consensus 150 ~~~l~~~ 156 (161)
.+.|.+.
T Consensus 241 v~~Ll~~ 247 (260)
T 3jxi_A 241 FQHIIRR 247 (260)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555543
No 58
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=3.8e-26 Score=153.61 Aligned_cols=144 Identities=18% Similarity=0.178 Sum_probs=113.0
Q ss_pred cccCCCCCcHHHHHHHhCCHHHHHHHHHhhH----hhhcCCCCCCCccchh---------------hhhhhhhcCCCccH
Q 037410 13 LNVNAKGDTPLRVAAKFGHSDIVSVLVQTAK----IAQHGDGEPESGIGAD---------------RQMIRMANNEKNTA 73 (161)
Q Consensus 13 ~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~ 73 (161)
+.+|.+|+||||+|+..|+.+++++|++.+. .++..+..+.++++.. +..++.++..|.||
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 81 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTP 81 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCH
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 3578999999999999999999999999876 4566666666665332 23355678889999
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCC-----ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCC-cccchHHHHH--
Q 037410 74 LHEAVCHGNVHVVKILTKQGPDN-----PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAP-TERQLCMLQQ-- 145 (161)
Q Consensus 74 l~~a~~~~~~~~~~~L~~~g~~~-----~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~~~t~l~~~~-- 145 (161)
||+|+..|+.+++++|++.++.. .+..+..|.||||+|+..|+.+++++|+++|++++.++. .|+||||++.
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 161 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL 161 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Confidence 99999999999999999998642 456788899999999999999999999999999999998 9999999964
Q ss_pred -hHHHHHHHHhh
Q 037410 146 -CTFILLSLTRY 156 (161)
Q Consensus 146 -~~~~~~~l~~~ 156 (161)
...+.+.|.++
T Consensus 162 ~~~~~v~~Ll~~ 173 (236)
T 1ikn_D 162 QNPDLVSLLLKC 173 (236)
T ss_dssp TCHHHHHHHHTT
T ss_pred CCHHHHHHHHHc
Confidence 35556665554
No 59
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=3.4e-25 Score=160.93 Aligned_cols=152 Identities=21% Similarity=0.220 Sum_probs=127.7
Q ss_pred HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcC
Q 037410 4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANN 68 (161)
Q Consensus 4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 68 (161)
+|...+..++..+..|.||||+|+..|+.+++++|++.+.+++..+..+.+++... ...++..+.
T Consensus 230 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 309 (437)
T 1n11_A 230 SLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR 309 (437)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCS
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCC
Confidence 34456677888888999999999999999999999999888887777776665432 223456788
Q ss_pred CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh--
Q 037410 69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC-- 146 (161)
Q Consensus 69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~-- 146 (161)
.|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||++++..
T Consensus 310 ~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 310 MGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp SCCCHHHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 899999999999999999999999998 88999999999999999999999999999999999999999999999643
Q ss_pred -HHHHHHHHhh
Q 037410 147 -TFILLSLTRY 156 (161)
Q Consensus 147 -~~~~~~l~~~ 156 (161)
..+...|...
T Consensus 389 ~~~~~~~l~~~ 399 (437)
T 1n11_A 389 YISVTDVLKVV 399 (437)
T ss_dssp CHHHHHHHHHH
T ss_pred cHHHHHHHHhc
Confidence 3455555443
No 60
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=8.3e-26 Score=155.01 Aligned_cols=138 Identities=19% Similarity=0.133 Sum_probs=112.0
Q ss_pred cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHH---
Q 037410 15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTK--- 91 (161)
Q Consensus 15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~--- 91 (161)
.|..|+||||+|+..|+.+++++|++.|++++..+..... ........+..|.||||+|+..|+.+++++|++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~----~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFF----KKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW 172 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGG----SSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccc----ccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 5678999999999999999999999999987764321100 000011223479999999999999999999999
Q ss_pred cCCCCccccCCCCCcHHHHHHhCCC---------hHHHHHHHhcCCCCC-------CCCCcccchHHHH---HhHHHHHH
Q 037410 92 QGPDNPYSANNYGKTPLYMAAKGRY---------SEMVIELLETAHQCP-------MKAPTERQLCMLQ---QCTFILLS 152 (161)
Q Consensus 92 ~g~~~~~~~~~~~~t~l~~A~~~~~---------~~~~~~Ll~~g~~~~-------~~~~~~~t~l~~~---~~~~~~~~ 152 (161)
.|++ ++.+|..|.||||+|+..++ .+++++|+++|++++ .+|..|+||||+| +...+.+.
T Consensus 173 ~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~ 251 (273)
T 2pnn_A 173 QPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAY 251 (273)
T ss_dssp CCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHH
Confidence 8888 88999999999999999888 799999999999986 4899999999996 45556666
Q ss_pred HHhhh
Q 037410 153 LTRYS 157 (161)
Q Consensus 153 l~~~~ 157 (161)
|.++.
T Consensus 252 Ll~~g 256 (273)
T 2pnn_A 252 ILQRE 256 (273)
T ss_dssp HHHHH
T ss_pred HHHCC
Confidence 66554
No 61
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=3.7e-25 Score=155.99 Aligned_cols=80 Identities=20% Similarity=0.167 Sum_probs=60.7
Q ss_pred hhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410 64 RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCML 143 (161)
Q Consensus 64 ~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~ 143 (161)
+.++..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++
T Consensus 241 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~ 319 (351)
T 3utm_A 241 NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQM 319 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhh
Confidence 34566677777777777777777777777776 67777777777777777777777777777777777777777777777
Q ss_pred H
Q 037410 144 Q 144 (161)
Q Consensus 144 ~ 144 (161)
+
T Consensus 320 a 320 (351)
T 3utm_A 320 G 320 (351)
T ss_dssp S
T ss_pred h
Confidence 5
No 62
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=4.1e-25 Score=153.10 Aligned_cols=135 Identities=22% Similarity=0.194 Sum_probs=111.0
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
+.+++. +.+++..|..|+||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|
T Consensus 57 ~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------------------~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 57 LRLLER-GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQ------------------PDNEGWIPLHAAASCG 117 (299)
T ss_dssp HHHHHH-CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHT
T ss_pred HHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCcHHHHHHHcC
Confidence 345544 577889999999999999999999999999999988665 5677888888888888
Q ss_pred cHHHHHHHHHcCCCCcccc------------------------------------------------------------C
Q 037410 82 NVHVVKILTKQGPDNPYSA------------------------------------------------------------N 101 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~------------------------------------------------------------~ 101 (161)
+.+++++|++.|++ ++.. +
T Consensus 118 ~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 196 (299)
T 1s70_B 118 YLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHA 196 (299)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCT
T ss_pred CHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhc
Confidence 88888888888765 3333 3
Q ss_pred CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410 102 NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY 156 (161)
Q Consensus 102 ~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~ 156 (161)
..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|. ...+...|..+
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 254 (299)
T 1s70_B 197 KSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN 254 (299)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHc
Confidence 45789999999999999999999999999999999999999963 44555555554
No 63
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=8.5e-26 Score=152.91 Aligned_cols=110 Identities=23% Similarity=0.213 Sum_probs=101.6
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCC
Q 037410 16 NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD 95 (161)
Q Consensus 16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~ 95 (161)
+..|.||||+|+..|+.+++++|++ |.+++. ++..|.||||+|+..|+.+++++|++.|++
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~------------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 102 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDA------------------VDENGRTALLFVAGLGSDKCVRLLAEAGAD 102 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTC------------------BCTTSCBHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCC------------------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 4578999999999999999999999 766544 788999999999999999999999999998
Q ss_pred CccccC-CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410 96 NPYSAN-NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ 145 (161)
Q Consensus 96 ~~~~~~-~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~ 145 (161)
++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|++.
T Consensus 103 -~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 103 -LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 152 (244)
T ss_dssp -TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred -CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 67777 78999999999999999999999999999999999999999874
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=4.6e-25 Score=141.04 Aligned_cols=120 Identities=18% Similarity=0.207 Sum_probs=108.1
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCc
Q 037410 18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNP 97 (161)
Q Consensus 18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~ 97 (161)
.|.||||+|+..|+.+++++|++.+..++. .+..|.||||+|+..|+.+++++|++.|++ +
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~ 62 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINH------------------TDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-P 62 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCC------------------CCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-C
Confidence 589999999999999999999999877544 788999999999999999999999999988 7
Q ss_pred cccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410 98 YSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY 156 (161)
Q Consensus 98 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~ 156 (161)
+..+..|.||||+|+..++.+++++|+++|++++.++..|+||+|++. ...+.+.|.++
T Consensus 63 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 124 (167)
T 3v31_A 63 QLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES 124 (167)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 889999999999999999999999999999999999999999999964 34455555543
No 65
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.93 E-value=7.4e-25 Score=151.35 Aligned_cols=148 Identities=18% Similarity=0.164 Sum_probs=114.5
Q ss_pred hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh---------hhhh-----hhcCCCcc
Q 037410 7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR---------QMIR-----MANNEKNT 72 (161)
Q Consensus 7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~~~-----~~~~~g~t 72 (161)
..+..++.+|..|+||||+|+..|+.+++++|++.|.+++..+..+.+++...- .++. ..+..|.|
T Consensus 80 ~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t 159 (285)
T 3d9h_A 80 SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLAS 159 (285)
T ss_dssp HTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSC
T ss_pred HCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCC
Confidence 456778888889999999999999999999999998888877777666654321 1111 12345788
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHH
Q 037410 73 ALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFI 149 (161)
Q Consensus 73 ~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~ 149 (161)
|||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++. +..|+||||++ +...+
T Consensus 160 ~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~ 237 (285)
T 3d9h_A 160 PIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEEL 237 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHH
Confidence 89999888899999999888887 778888888999999999999999999998888884 78888999886 34455
Q ss_pred HHHHHhh
Q 037410 150 LLSLTRY 156 (161)
Q Consensus 150 ~~~l~~~ 156 (161)
.+.|..+
T Consensus 238 v~~Ll~~ 244 (285)
T 3d9h_A 238 ACLLMDF 244 (285)
T ss_dssp HHHHHHT
T ss_pred HHHHHHC
Confidence 5555554
No 66
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=8.6e-25 Score=146.88 Aligned_cols=151 Identities=17% Similarity=0.091 Sum_probs=120.1
Q ss_pred HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------h-hhhhhhcC
Q 037410 5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------R-QMIRMANN 68 (161)
Q Consensus 5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~~~ 68 (161)
|...+..++..+..|+||||+|+..|+.+++++|++.|..++..+..+..++... . ...+..+.
T Consensus 30 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 109 (237)
T 3b7b_A 30 LVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD 109 (237)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT
T ss_pred HHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC
Confidence 3445778888889999999999999999999999999888877776666655321 0 22445567
Q ss_pred CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh--
Q 037410 69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC-- 146 (161)
Q Consensus 69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~-- 146 (161)
.|.||||+|+..++.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|++..
T Consensus 110 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 188 (237)
T 3b7b_A 110 GGWTPMIWATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAAREN 188 (237)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC
Confidence 788999999999999999999998887 77888889999999999999999999999999999999999999998643
Q ss_pred -HHHHHHHHhh
Q 037410 147 -TFILLSLTRY 156 (161)
Q Consensus 147 -~~~~~~l~~~ 156 (161)
..+...|.++
T Consensus 189 ~~~~v~~Ll~~ 199 (237)
T 3b7b_A 189 RYDCVVLFLSR 199 (237)
T ss_dssp CHHHHHHHHTT
T ss_pred CHhHHHHHHHc
Confidence 3444444443
No 67
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=8e-25 Score=156.38 Aligned_cols=138 Identities=21% Similarity=0.220 Sum_probs=86.6
Q ss_pred hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------h---hhhhhhc-
Q 037410 7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------R---QMIRMAN- 67 (161)
Q Consensus 7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~---~~~~~~~- 67 (161)
..+++++.+|..|+||||+|+..|+.+++++|++.|++++..+..+.+++... . ..++..+
T Consensus 154 ~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~ 233 (373)
T 2fo1_E 154 AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR 233 (373)
T ss_dssp HTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT
T ss_pred hcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCC
Confidence 56777788888888888888888888888888888877776655554443211 0 1122223
Q ss_pred -------------------------------------------CCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCC
Q 037410 68 -------------------------------------------NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYG 104 (161)
Q Consensus 68 -------------------------------------------~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~ 104 (161)
..|.||||+|+..|+.+++++|++.+..+++.+|..|
T Consensus 234 ~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g 313 (373)
T 2fo1_E 234 NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDG 313 (373)
T ss_dssp TSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTC
T ss_pred CCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCC
Confidence 3455666666666666666666655422255566666
Q ss_pred CcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410 105 KTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ 144 (161)
Q Consensus 105 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~ 144 (161)
.||||+|+..|+.+++++|+++|++++.+|..|+||+++|
T Consensus 314 ~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 314 KTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 353 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence 6666666666666666666666666666666666666664
No 68
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=1e-24 Score=155.86 Aligned_cols=120 Identities=14% Similarity=0.116 Sum_probs=91.5
Q ss_pred ccccccCCCCCcHHHHHHHhC---CHHHHHHHHHhhHhhhc--------CCCCCCCccchh----------------hhh
Q 037410 10 SLLLNVNAKGDTPLRVAAKFG---HSDIVSVLVQTAKIAQH--------GDGEPESGIGAD----------------RQM 62 (161)
Q Consensus 10 ~~~~~~~~~g~t~lh~A~~~g---~~~~v~~Ll~~~~~~~~--------~~~~~~~~~~~~----------------~~~ 62 (161)
..++..|..|+||||+|+..+ +.+++++|++.|.+++. .+..+.++++.. ...
T Consensus 226 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 305 (373)
T 2fo1_E 226 GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 305 (373)
T ss_dssp HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC
T ss_pred cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC
Confidence 455666667777777777766 66777777777766554 233344444221 134
Q ss_pred hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCC
Q 037410 63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQC 130 (161)
Q Consensus 63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 130 (161)
++.++..|.||||+|+..|+.+++++|++.|++ ++.+|..|.|||++|+..|+.+++++|++++++.
T Consensus 306 ~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 306 KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 556788999999999999999999999999998 8899999999999999999999999999998753
No 69
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=4.2e-25 Score=157.11 Aligned_cols=124 Identities=18% Similarity=0.237 Sum_probs=112.2
Q ss_pred cCCCCCcHHHHHHHhC--CHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHc
Q 037410 15 VNAKGDTPLRVAAKFG--HSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQ 92 (161)
Q Consensus 15 ~~~~g~t~lh~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~ 92 (161)
+|..|+||||+|+..| +.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~------------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 195 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA------------------KDKADETPLMRAMEFRNREALDLMMDT 195 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 7889999999999999 99999999999988654 788999999999999999999999999
Q ss_pred CCCC----ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHHHHHHhh
Q 037410 93 GPDN----PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFILLSLTRY 156 (161)
Q Consensus 93 g~~~----~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~~~l~~~ 156 (161)
|++. ++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++| +...+.+.|.+.
T Consensus 196 g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 196 VPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp CSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHH
T ss_pred ccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHc
Confidence 8763 577889999999999999999999999999999999999999999996 445566666655
No 70
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=3.4e-24 Score=147.08 Aligned_cols=135 Identities=20% Similarity=0.180 Sum_probs=115.1
Q ss_pred hhHHHhCCcccccc-CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc
Q 037410 2 EEILELCPSLLLNV-NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH 80 (161)
Q Consensus 2 ~~ll~~~~~~~~~~-~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~ 80 (161)
+.+++. +..++.. +..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..
T Consensus 22 ~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 22 QQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL------------------RKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHH
T ss_pred HHHHHc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHc
Confidence 445544 4566666 78899999999999999999999999887554 678899999999999
Q ss_pred CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCC----------CCcccchHHHHHh---H
Q 037410 81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMK----------APTERQLCMLQQC---T 147 (161)
Q Consensus 81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~t~l~~~~~---~ 147 (161)
|+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.. +..|.||+|++.. .
T Consensus 83 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 161 (285)
T 1wdy_A 83 GSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161 (285)
T ss_dssp TCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred CCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCH
Confidence 999999999999988 7888999999999999999999999999999999888 7889999998644 3
Q ss_pred HHHHHHHhh
Q 037410 148 FILLSLTRY 156 (161)
Q Consensus 148 ~~~~~l~~~ 156 (161)
.+.+.|...
T Consensus 162 ~~v~~Ll~~ 170 (285)
T 1wdy_A 162 EVLKILLDE 170 (285)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 455555543
No 71
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.92 E-value=6.4e-25 Score=151.70 Aligned_cols=136 Identities=17% Similarity=0.132 Sum_probs=94.8
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcCCC-ccHHHHHHhcCc
Q 037410 19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANNEK-NTALHEAVCHGN 82 (161)
Q Consensus 19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g-~t~l~~a~~~~~ 82 (161)
|+||||+|+..|+.+++++|++.|++++..+..+.++++.. ...++..+..| .||||+|+..|+
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~ 141 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND 141 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCC
Confidence 45555555555555555555555555444444443333211 12244577788 799999999999
Q ss_pred HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccch-HHHHH---hHHHHHHHHhh
Q 037410 83 VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQL-CMLQQ---CTFILLSLTRY 156 (161)
Q Consensus 83 ~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~-l~~~~---~~~~~~~l~~~ 156 (161)
.+++++|++.|++.. ....|.||||+|+..|+.+++++|+++|++++.++..|+|| +|+|. ...+.+.|.++
T Consensus 142 ~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~ 217 (285)
T 3kea_A 142 VSIVSYFLSEIPSTF--DLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217 (285)
T ss_dssp HHHHHHHHTTSCTTC--CCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS
T ss_pred HHHHHHHHhCCCccc--cccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHc
Confidence 999999999997732 12288999999999999999999999999999999999998 99864 34455555443
No 72
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=1.9e-24 Score=153.73 Aligned_cols=151 Identities=19% Similarity=0.194 Sum_probs=122.4
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------hhhhhh-------
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------RQMIRM------- 65 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------~~~~~~------- 65 (161)
+.|+ ..+.+++.+|..|+||||+|+..|+.+++++|++.|...+.. .+.+++... ..++..
T Consensus 37 ~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~ 113 (364)
T 3ljn_A 37 RRLI-ETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW--HGQKPIHLAVMANKTDLVVALVEGAKERGQM 113 (364)
T ss_dssp HHHH-HTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCB--TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCC
T ss_pred HHHH-HcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc--CCCCHHHHHHHcCCHHHHHHHHHhccccCCC
Confidence 3444 457889999999999999999999999999999999854432 233333211 111221
Q ss_pred --------------------hcCCCccHHHHHHhcC--cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHH
Q 037410 66 --------------------ANNEKNTALHEAVCHG--NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL 123 (161)
Q Consensus 66 --------------------~~~~g~t~l~~a~~~~--~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L 123 (161)
.+..|.||||+|+..| +.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~L 192 (364)
T 3ljn_A 114 PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLM 192 (364)
T ss_dssp HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 6778999999999999 99999999999998 889999999999999999999999999
Q ss_pred HhcCCC-----CCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410 124 LETAHQ-----CPMKAPTERQLCMLQQ---CTFILLSLTRY 156 (161)
Q Consensus 124 l~~g~~-----~~~~~~~~~t~l~~~~---~~~~~~~l~~~ 156 (161)
+++|++ ++..+..|+||||+|. ...+.+.|..+
T Consensus 193 l~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 233 (364)
T 3ljn_A 193 MDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM 233 (364)
T ss_dssp HHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT
T ss_pred HhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 999999 9999999999999964 44555555543
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.92 E-value=1.1e-24 Score=139.72 Aligned_cols=123 Identities=24% Similarity=0.243 Sum_probs=108.2
Q ss_pred cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCC
Q 037410 15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGP 94 (161)
Q Consensus 15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~ 94 (161)
....+.++|++|++.|+.+++++|++.|.+++. .+..|.||||+|+..|+.+++++|++.|+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 71 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNA------------------EDASGWTPLHLAAFNGHLEIVEVLLKNGA 71 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 455688999999999999999999999987554 68899999999999999999999999998
Q ss_pred CCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410 95 DNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY 156 (161)
Q Consensus 95 ~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~ 156 (161)
+ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++. ...+.+.|.++
T Consensus 72 ~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 135 (169)
T 2y1l_E 72 D-VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN 135 (169)
T ss_dssp C-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred C-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 8 7889999999999999999999999999999999999999999999964 34455555543
No 74
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=2.5e-24 Score=156.37 Aligned_cols=152 Identities=22% Similarity=0.157 Sum_probs=130.7
Q ss_pred HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcC
Q 037410 4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANN 68 (161)
Q Consensus 4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 68 (161)
+|...+...+.++..|+||||+|+..|+.+++++|++.|.+++..+..+.+++... ....+..+.
T Consensus 197 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 276 (437)
T 1n11_A 197 LLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNK 276 (437)
T ss_dssp HHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT
T ss_pred HHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCC
Confidence 34455677888899999999999999999999999999999888877776665432 122456678
Q ss_pred CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---H
Q 037410 69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---Q 145 (161)
Q Consensus 69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~ 145 (161)
.|.||||+|+..|+.+++++|++.|.+ ++.++..|.||||+|+..|+.+++++|+++|++++.++..|+||||+| +
T Consensus 277 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g 355 (437)
T 1n11_A 277 SGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQG 355 (437)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCC
Confidence 899999999999999999999999998 888999999999999999999999999999999999999999999996 3
Q ss_pred hHHHHHHHHhh
Q 037410 146 CTFILLSLTRY 156 (161)
Q Consensus 146 ~~~~~~~l~~~ 156 (161)
...+.+.|.++
T Consensus 356 ~~~iv~~Ll~~ 366 (437)
T 1n11_A 356 HTDIVTLLLKN 366 (437)
T ss_dssp CHHHHHHHHHT
T ss_pred hHHHHHHHHHC
Confidence 45566666654
No 75
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=1.8e-24 Score=137.57 Aligned_cols=108 Identities=24% Similarity=0.178 Sum_probs=97.8
Q ss_pred HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcH
Q 037410 4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV 83 (161)
Q Consensus 4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~ 83 (161)
+|...+.+++.+|..|+||||+|+..|+.+++++|++.|.+++. ++..|.||||+|+..|+.
T Consensus 55 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~ 116 (162)
T 1ihb_A 55 RLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNI------------------EDNEGNLPLHLAAKEGHL 116 (162)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCH
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCH
Confidence 34455788999999999999999999999999999999987554 788999999999999999
Q ss_pred HHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410 84 HVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ 129 (161)
Q Consensus 84 ~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~ 129 (161)
+++++|++.|++.++..+..|.|||++|+..++.+++++|+++|++
T Consensus 117 ~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 117 RVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999986688999999999999999999999999999975
No 76
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.92 E-value=3.4e-25 Score=142.32 Aligned_cols=118 Identities=19% Similarity=0.135 Sum_probs=102.7
Q ss_pred hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc
Q 037410 3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN 82 (161)
Q Consensus 3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~ 82 (161)
.|+ ..+.+++.+|..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..++
T Consensus 54 ~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~ 114 (172)
T 3v30_A 54 FLL-EWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINI------------------YDWNGGTPLLYAVRGNH 114 (172)
T ss_dssp HHH-HHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC------------------CCTTSCCHHHHHHHTTC
T ss_pred HHH-HcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCC
Confidence 344 45688899999999999999999999999999999887554 78899999999999999
Q ss_pred HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccch
Q 037410 83 VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQL 140 (161)
Q Consensus 83 ~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~ 140 (161)
.+++++|++.|++ ++.++..|.|||++|+..++.+++++|+++|++....+..+.||
T Consensus 115 ~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 115 VKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHHHHHHcCCC-ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999999998 88899999999999999999999999999999999999888887
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=8.4e-26 Score=151.64 Aligned_cols=122 Identities=15% Similarity=0.130 Sum_probs=109.3
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
+.|++ .+.+++.+|..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..|
T Consensus 38 ~~Ll~-~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~------------------~d~~g~tpLh~A~~~g 98 (229)
T 2vge_A 38 QQAVK-EMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNS------------------PDSHGWTPLHCAASCN 98 (229)
T ss_dssp HHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTT
T ss_pred HHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcC
Confidence 44554 4678899999999999999999999999999999988654 7889999999999999
Q ss_pred cHHHHHHHHHcCCCCccccC-CCCCcHHHHH--HhCCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410 82 NVHVVKILTKQGPDNPYSAN-NYGKTPLYMA--AKGRYSEMVIELLETAHQCPMKAPTERQLCML 143 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~-~~~~t~l~~A--~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~ 143 (161)
+.+++++|++.|++ ++..+ ..|.||||+| +..++.+++++|+++|++++.+|..+.||++.
T Consensus 99 ~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~ 162 (229)
T 2vge_A 99 DTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWD 162 (229)
T ss_dssp CHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSC
T ss_pred CHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHH
Confidence 99999999999998 66665 6999999999 99999999999999999998888888888763
No 78
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=2.1e-24 Score=133.75 Aligned_cols=104 Identities=24% Similarity=0.320 Sum_probs=95.4
Q ss_pred HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410 5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH 84 (161)
Q Consensus 5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 84 (161)
|...+.+++.+|..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..++.+
T Consensus 33 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~~~~~ 94 (136)
T 2jab_A 33 LMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA------------------VDAIGFTPLHLAAFIGHLE 94 (136)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHHTCHH
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------CCCCCCCHHHHHHHcCCHH
Confidence 3345788899999999999999999999999999999887554 6889999999999999999
Q ss_pred HHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC
Q 037410 85 VVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA 127 (161)
Q Consensus 85 ~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 127 (161)
++++|++.|++ ++.++..|.|||++|+..++.+++++|+++|
T Consensus 95 ~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 95 IAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999998 8889999999999999999999999999876
No 79
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=8e-24 Score=145.20 Aligned_cols=90 Identities=22% Similarity=0.252 Sum_probs=56.0
Q ss_pred hhcCCCccHHHHHHhcCc----HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHh-cCCCCCCCCCcccc
Q 037410 65 MANNEKNTALHEAVCHGN----VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE-TAHQCPMKAPTERQ 139 (161)
Q Consensus 65 ~~~~~g~t~l~~a~~~~~----~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t 139 (161)
..+..|.||||+|+..++ .+++++|++.|++ ++.++..|.||||+|++.++.+++++|++ .|++++.+|..|+|
T Consensus 177 ~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t 255 (285)
T 1wdy_A 177 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKT 255 (285)
T ss_dssp CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCC
T ss_pred ccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCc
Confidence 344556666666666665 5666666666665 55666666667776666666666666666 56666666666677
Q ss_pred hHHHHH---hHHHHHHHHh
Q 037410 140 LCMLQQ---CTFILLSLTR 155 (161)
Q Consensus 140 ~l~~~~---~~~~~~~l~~ 155 (161)
|+++|. ...+.+.|.+
T Consensus 256 ~l~~A~~~~~~~i~~~Ll~ 274 (285)
T 1wdy_A 256 ALLLAVELKLKKIAELLCK 274 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHH
Confidence 766643 2344444443
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=2.9e-25 Score=137.64 Aligned_cols=106 Identities=16% Similarity=0.272 Sum_probs=97.5
Q ss_pred hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCC-CccHHHHHHhcC
Q 037410 3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE-KNTALHEAVCHG 81 (161)
Q Consensus 3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~t~l~~a~~~~ 81 (161)
.|+ ..+..++.+|..|+||||+|+. |+.+++++|+++|.+++. ++.. |.||||+|+..|
T Consensus 30 ~Ll-~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~------------------~~~~~g~t~L~~A~~~~ 89 (136)
T 1d9s_A 30 QLL-EAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC------------------ADPATLTRPVHDAAREG 89 (136)
T ss_dssp HHH-HTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC------------------CBTTTTBCHHHHHHHHT
T ss_pred HHH-HcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC------------------cCCCCCCCHHHHHHHcC
Confidence 344 4578899999999999999999 999999999999988654 6778 999999999999
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ 129 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~ 129 (161)
+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++
T Consensus 90 ~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 90 FLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999998 889999999999999999999999999999975
No 81
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=1.8e-24 Score=136.54 Aligned_cols=118 Identities=21% Similarity=0.210 Sum_probs=105.6
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCcc
Q 037410 19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPY 98 (161)
Q Consensus 19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~ 98 (161)
..+|||.|+..|+.+++++|++.|...+ .+..|.||||+|+..|+.+++++|++.|++ ++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~ 61 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-------------------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RD 61 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-------------------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC
Confidence 4689999999999999999999987533 377899999999999999999999999988 78
Q ss_pred ccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410 99 SANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY 156 (161)
Q Consensus 99 ~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~ 156 (161)
..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++. ...+.+.|.++
T Consensus 62 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 122 (153)
T 1awc_B 62 ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122 (153)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 89999999999999999999999999999999999999999999964 34556666554
No 82
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=8.3e-24 Score=136.73 Aligned_cols=122 Identities=16% Similarity=0.129 Sum_probs=104.8
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCC
Q 037410 17 AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDN 96 (161)
Q Consensus 17 ~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~ 96 (161)
.++.++||.|+..|+.+++++|++.+... ++..+..|.||||+|+..|+.+++++|++.|++
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~- 64 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTEND-----------------LNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR- 64 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCccc-----------------ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-
Confidence 56889999999999999999999985431 334788999999999999999999999999988
Q ss_pred ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410 97 PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY 156 (161)
Q Consensus 97 ~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~ 156 (161)
++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++. ...+.+.|..+
T Consensus 65 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 127 (179)
T 3f6q_A 65 INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN 127 (179)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 8889999999999999999999999999999999999999999999964 44555555544
No 83
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=4.1e-24 Score=136.38 Aligned_cols=125 Identities=22% Similarity=0.131 Sum_probs=107.2
Q ss_pred ccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcC
Q 037410 14 NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQG 93 (161)
Q Consensus 14 ~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g 93 (161)
..|.+|.||||.|+..|+.+++++|++.+... ....+..|.||||+|+..|+.+++++|++.|
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 65 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVN-----------------CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG 65 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTT-----------------CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCC-----------------ccccccCCCCHHHHHHHcChHHHHHHHHhcC
Confidence 35778999999999999999999999864321 2235778899999999999999999999999
Q ss_pred CCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410 94 PDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY 156 (161)
Q Consensus 94 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~ 156 (161)
++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++. ...+.+.|.++
T Consensus 66 ~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 130 (165)
T 3twr_A 66 AD-VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH 130 (165)
T ss_dssp CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CC-CCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 98 8889999999999999999999999999999999999999999999964 34555555554
No 84
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=1.7e-23 Score=147.37 Aligned_cols=140 Identities=21% Similarity=0.176 Sum_probs=104.1
Q ss_pred hhHHHhCCccccccCC-CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhh
Q 037410 2 EEILELCPSLLLNVNA-KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRM 65 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~-~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 65 (161)
+.||+ .+++++.++. .|+||||+|+..|+.+++++|+++|+.++..+......+... ...++.
T Consensus 42 ~~LL~-~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (337)
T 4g8k_A 42 QQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNE 120 (337)
T ss_dssp HHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC
T ss_pred HHHHH-CCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhh
Confidence 45554 4688888876 499999999999999999999999999888766655444221 123455
Q ss_pred hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccc----------cCCCCCcHHHHHHhCCChHHHHHHHh-cCCCCCCCC
Q 037410 66 ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYS----------ANNYGKTPLYMAAKGRYSEMVIELLE-TAHQCPMKA 134 (161)
Q Consensus 66 ~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~----------~~~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~ 134 (161)
.+..|.||+|+|+..|+.+++++|++.|++ ++. .+..|.||||+|++.|+.+++++|++ .|++++.++
T Consensus 121 ~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~-~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d 199 (337)
T 4g8k_A 121 CDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD 199 (337)
T ss_dssp BCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCC
T ss_pred hccCCCCHHHHHHHcCcHHHHHHHHHcCCC-cchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccC
Confidence 677778888888888888888888877765 322 23457788888888888888887775 477777777
Q ss_pred CcccchHHH
Q 037410 135 PTERQLCML 143 (161)
Q Consensus 135 ~~~~t~l~~ 143 (161)
..|+|+++.
T Consensus 200 ~~g~t~l~~ 208 (337)
T 4g8k_A 200 NMGRNALIH 208 (337)
T ss_dssp TTSCCHHHH
T ss_pred CCCCcHHHH
Confidence 777777765
No 85
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=2e-23 Score=140.03 Aligned_cols=123 Identities=21% Similarity=0.196 Sum_probs=76.3
Q ss_pred hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc
Q 037410 3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN 82 (161)
Q Consensus 3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~ 82 (161)
.++ ..+.+++.+|..|.||||+|+..|+.+++++|++.|...+... +..|.||||+|+..|+
T Consensus 27 ~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-----------------~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 27 ELV-EAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG-----------------GDLNSTPLHWATRQGH 88 (240)
T ss_dssp HHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB-----------------TTTTBCHHHHHHHHTC
T ss_pred HHH-HcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc-----------------CCcCCChhHHHHHcCC
Confidence 344 4567788889999999999999999999999999988765432 2234455555555555
Q ss_pred HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410 83 VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ 144 (161)
Q Consensus 83 ~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~ 144 (161)
.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++..+..|+||++++
T Consensus 89 ~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a 149 (240)
T 3eu9_A 89 LSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWA 149 (240)
T ss_dssp HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHH
Confidence 5555555555544 444444555555555555555555555555555555555555555543
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.3e-23 Score=128.10 Aligned_cols=108 Identities=31% Similarity=0.462 Sum_probs=97.9
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
+.+++ .+..++..|..|.||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..+
T Consensus 19 ~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 19 KLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------------------KDKNGRTPLHLAARNG 79 (126)
T ss_dssp HHHHH-HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTT
T ss_pred HHHHH-cCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc------------------cCCCCCcHHHHHHHcC
Confidence 34444 4677888999999999999999999999999999887554 6888999999999999
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ 129 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~ 129 (161)
+.+++++|++.|++ ++.++..|.|||++|+..++.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999998 788999999999999999999999999999975
No 87
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.91 E-value=2.8e-24 Score=147.39 Aligned_cols=144 Identities=18% Similarity=0.164 Sum_probs=98.4
Q ss_pred ccccCCCCCcHHHHHHHhCCH-HHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcCCCccHHH
Q 037410 12 LLNVNAKGDTPLRVAAKFGHS-DIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANNEKNTALH 75 (161)
Q Consensus 12 ~~~~~~~g~t~lh~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~ 75 (161)
++..+..|.||||+|+..+.. .++++|++.|.+++..+..+.++++.. ....+..+..|.||++
T Consensus 45 ~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~ 124 (269)
T 4b93_B 45 VSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLH 124 (269)
T ss_dssp ------------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred ccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccc
Confidence 566778899999999998875 478999999999999888887776432 2234566788999999
Q ss_pred HHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHH
Q 037410 76 EAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLS 152 (161)
Q Consensus 76 ~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~ 152 (161)
+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|. ...+.+.
T Consensus 125 ~a~~~~~~~~~~~Ll~~g~~-~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~ 203 (269)
T 4b93_B 125 LACQQGHFQVVKCLLDSNAK-PNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVEL 203 (269)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred cccccChHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHH
Confidence 99999999999999999998 8899999999999999999999999999999999999999999999963 4456666
Q ss_pred HHhh
Q 037410 153 LTRY 156 (161)
Q Consensus 153 l~~~ 156 (161)
|..+
T Consensus 204 Ll~~ 207 (269)
T 4b93_B 204 LLLH 207 (269)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 6554
No 88
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=1.5e-24 Score=150.85 Aligned_cols=118 Identities=21% Similarity=0.127 Sum_probs=102.4
Q ss_pred hHHHhCCccccc------cCCCCCcHHHHHHHh---CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccH
Q 037410 3 EILELCPSLLLN------VNAKGDTPLRVAAKF---GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73 (161)
Q Consensus 3 ~ll~~~~~~~~~------~~~~g~t~lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 73 (161)
.++ ..+.+++. .+..|+||||+|+.. |+.+++++|+++|++++. +|..|.||
T Consensus 169 ~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~------------------~d~~G~Tp 229 (301)
T 2b0o_E 169 EAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA------------------KAADGNTA 229 (301)
T ss_dssp HHH-HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC------------------CCTTCCCH
T ss_pred HHH-hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC------------------CCCCCCCH
Confidence 344 44556666 688999999999997 899999999999988654 78899999
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh
Q 037410 74 LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC 146 (161)
Q Consensus 74 l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~ 146 (161)
||+|+..|+.+++++|++.|++ ++.+|..|.|||++|+..++.+++++|+++|++ .|.||+|+|..
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYS 295 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC----
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHh
Confidence 9999999999999999999998 889999999999999999999999999999976 57899998753
No 89
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=1.7e-23 Score=140.39 Aligned_cols=154 Identities=18% Similarity=0.114 Sum_probs=115.6
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhh
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMA 66 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 66 (161)
+.+++.........+..|+||||+|+..|+.+++++|++.|.+++..+..+..++... ...++..
T Consensus 59 ~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~ 138 (240)
T 3eu9_A 59 KYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMM 138 (240)
T ss_dssp HHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcccc
Confidence 3444444433334445588888888888888888888888887777666655554321 1224556
Q ss_pred cCCCccHHHHHHhcCc-HHHHHHHHHcCCCCccccCC-CCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410 67 NNEKNTALHEAVCHGN-VHVVKILTKQGPDNPYSANN-YGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ 144 (161)
Q Consensus 67 ~~~g~t~l~~a~~~~~-~~~~~~L~~~g~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~ 144 (161)
+..|.||||+|+..+. .+++++|++.+++ ++..+. .|.||||+|+..++.+++++|+++|++++.++..|+||+++|
T Consensus 139 ~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 217 (240)
T 3eu9_A 139 DQNGMTPLMWAAYRTHSVDPTRLLLTFNVS-VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLA 217 (240)
T ss_dssp CTTSCCHHHHHHHHCCSSTTHHHHHHTTCC-TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHH
T ss_pred CCCCCcHHHHHHHhCChHHHHHHHHhcCCC-cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 7888999999996655 7899999999988 666665 899999999999999999999999999999999999999996
Q ss_pred H---hHHHHHHHHhh
Q 037410 145 Q---CTFILLSLTRY 156 (161)
Q Consensus 145 ~---~~~~~~~l~~~ 156 (161)
. ...+.+.|.+.
T Consensus 218 ~~~~~~~~v~~L~~~ 232 (240)
T 3eu9_A 218 KQRKNVWMINHLQEA 232 (240)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHh
Confidence 4 34455555544
No 90
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.91 E-value=1.7e-23 Score=132.32 Aligned_cols=118 Identities=22% Similarity=0.223 Sum_probs=102.9
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCcc
Q 037410 19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPY 98 (161)
Q Consensus 19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~ 98 (161)
+.||||+|+..|+.+++++|++. ...+ .+..+..|.||||+ +..|+.+++++|++.|++ ++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~----------------~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~ 62 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVH----------------PDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PN 62 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCC----------------TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TT
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcC----------------ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CC
Confidence 56999999999999999999998 3111 33478889999999 999999999999999998 88
Q ss_pred ccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410 99 SANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTR 155 (161)
Q Consensus 99 ~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~ 155 (161)
.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|+|. ...+.+.|..
T Consensus 63 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 122 (156)
T 1bd8_A 63 VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA 122 (156)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999964 3444555443
No 91
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=5.9e-24 Score=143.38 Aligned_cols=113 Identities=23% Similarity=0.194 Sum_probs=101.1
Q ss_pred HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410 5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH 84 (161)
Q Consensus 5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 84 (161)
|...+.+++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+
T Consensus 56 Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------------------~d~~g~tpL~~A~~~~~~~ 117 (239)
T 1ycs_B 56 IIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA------------------ADSDGWTPLHCAASCNNVQ 117 (239)
T ss_dssp HTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC------------------CCTTCCCHHHHHHHTTCHH
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHH
Confidence 3345668999999999999999999999999999999988654 7889999999999999999
Q ss_pred HHHHHHHcCCCCccccCCCCC-cHHHHH--HhCCChHHHHHHHhcCCCCCCCCCc
Q 037410 85 VVKILTKQGPDNPYSANNYGK-TPLYMA--AKGRYSEMVIELLETAHQCPMKAPT 136 (161)
Q Consensus 85 ~~~~L~~~g~~~~~~~~~~~~-t~l~~A--~~~~~~~~~~~Ll~~g~~~~~~~~~ 136 (161)
++++|++.|++ ++..+..+. ||||+| +..|+.+++++|+++|++++..+..
T Consensus 118 ~v~~Ll~~ga~-~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~ 171 (239)
T 1ycs_B 118 VCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKG 171 (239)
T ss_dssp HHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGG
T ss_pred HHHHHHHcCCC-cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccc
Confidence 99999999998 777887776 999999 7889999999999999988877544
No 92
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=2.8e-23 Score=153.35 Aligned_cols=119 Identities=20% Similarity=0.091 Sum_probs=96.7
Q ss_pred hHHHhCCcccccc------CCCCCcHHHHHHH---hCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccH
Q 037410 3 EILELCPSLLLNV------NAKGDTPLRVAAK---FGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73 (161)
Q Consensus 3 ~ll~~~~~~~~~~------~~~g~t~lh~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 73 (161)
.+|+ .+++++.+ |..|+||||+|+. .|+.+++++|+++|++++. +|..|.||
T Consensus 150 ~ll~-~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~------------------~d~~g~Tp 210 (497)
T 3lvq_E 150 EAFA-NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA------------------KAADGNTA 210 (497)
T ss_dssp HHHH-TTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC------------------CCSSSCCH
T ss_pred HHHh-hcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCc------------------cCCCCCcH
Confidence 3443 45777766 8899999999966 9999999999999998665 78899999
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchH
Q 037410 74 LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLC 141 (161)
Q Consensus 74 l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l 141 (161)
||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++.......+++
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~~ 277 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSW 277 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeeccc
Confidence 9999999999999999999998 899999999999999999999999999999999888655544443
No 93
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.90 E-value=2.2e-22 Score=131.95 Aligned_cols=141 Identities=17% Similarity=0.122 Sum_probs=116.2
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhhH-hhhcCCCCCCCccchh---------------hhhhhhhcCCCccHHHHHHh
Q 037410 16 NAKGDTPLRVAAKFGHSDIVSVLVQTAK-IAQHGDGEPESGIGAD---------------RQMIRMANNEKNTALHEAVC 79 (161)
Q Consensus 16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~a~~ 79 (161)
+..+.||||.|+..|+.+.++.|+..+. +++..+..+.++++.. ...++..+..|.||||+|+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA 81 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 3578999999999999999999999887 7777777766665432 23356677889999999999
Q ss_pred cCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC-CCCCCCCCcccchHHHHHh--------HHHH
Q 037410 80 HGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA-HQCPMKAPTERQLCMLQQC--------TFIL 150 (161)
Q Consensus 80 ~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~l~~~~~--------~~~~ 150 (161)
.|+.+++++|++.+...++..+..|.||||+|+..++.+++++|+++| ++++.++..|+||+|++.. ..+.
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 999999999996665448888999999999999999999999999999 9999999999999999752 5556
Q ss_pred HHHHhh
Q 037410 151 LSLTRY 156 (161)
Q Consensus 151 ~~l~~~ 156 (161)
+.|.++
T Consensus 162 ~~Ll~~ 167 (201)
T 3hra_A 162 KLLMEN 167 (201)
T ss_dssp HHHHHT
T ss_pred HHHHHC
Confidence 666554
No 94
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=7.2e-23 Score=141.00 Aligned_cols=100 Identities=25% Similarity=0.247 Sum_probs=92.8
Q ss_pred ccccCCCCCcHHHHHHHh---CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHH
Q 037410 12 LLNVNAKGDTPLRVAAKF---GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKI 88 (161)
Q Consensus 12 ~~~~~~~g~t~lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 88 (161)
++..|..|+||||+|+.. |+.+++++|+++|++++. +|..|.||||+|+..|+.+++++
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~------------------~d~~g~TpLh~A~~~g~~~~v~~ 223 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK------------------QTGKGSTALHYCCLTDNAECLKL 223 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC------------------CCTTCCCHHHHHHHTTCHHHHHH
T ss_pred ccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHH
Confidence 455588899999999999 899999999999998665 78899999999999999999999
Q ss_pred HHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCC
Q 037410 89 LTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQC 130 (161)
Q Consensus 89 L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 130 (161)
|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 224 Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 224 LLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999998 8999999999999999999999999999999754
No 95
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=8.9e-23 Score=145.26 Aligned_cols=121 Identities=14% Similarity=0.110 Sum_probs=100.4
Q ss_pred CCCCCcHHHHHHHh-CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc--CCCccHHHHHHhcCcHHHHHHHHHc
Q 037410 16 NAKGDTPLRVAAKF-GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN--NEKNTALHEAVCHGNVHVVKILTKQ 92 (161)
Q Consensus 16 ~~~g~t~lh~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~L~~~ 92 (161)
+..+.|+||.|+.. |+.+++++|++.|.+++. .+ ..|.||||+|+..|+.+++++|++.
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~------------------~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~ 257 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNW------------------VNGGQDNATPLIQATAANSLLACEFLLQN 257 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTC------------------CCTTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCc------------------cccccCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 33456799999998 999999999998888665 34 7788999999999999999999999
Q ss_pred CCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410 93 GPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTR 155 (161)
Q Consensus 93 g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~ 155 (161)
|++ ++..|..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|. ...+...|..
T Consensus 258 Gad-vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~ 322 (368)
T 3jue_A 258 GAN-VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRL 322 (368)
T ss_dssp TCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCC-CCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 888 7888889999999999999999999999999999999999999999863 3444555543
No 96
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.89 E-value=3.6e-22 Score=140.67 Aligned_cols=143 Identities=17% Similarity=0.145 Sum_probs=113.7
Q ss_pred ccccccCCCCCcHHHHHHHhCCHHHHHHHHHh-hHhhhcCCCCCCCccch-------------------hhhhhhhhcCC
Q 037410 10 SLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQT-AKIAQHGDGEPESGIGA-------------------DRQMIRMANNE 69 (161)
Q Consensus 10 ~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~ 69 (161)
......+..|.||||+|+..|+.+++++|++. |.+++..+..+...+.. .+..++.++..
T Consensus 159 ~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~ 238 (337)
T 4g8k_A 159 EDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 238 (337)
T ss_dssp -----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGG
T ss_pred cccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCC
Confidence 34556778899999999999999999999964 88888877776655431 11234567888
Q ss_pred CccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---Hh
Q 037410 70 KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QC 146 (161)
Q Consensus 70 g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~ 146 (161)
|.||||+|+..|+.++++.|+..+..+++.+|..|.||||+|++.|+.+++++|+++|++++.+ +||++| +.
T Consensus 239 g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~ 313 (337)
T 4g8k_A 239 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYD 313 (337)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTC
T ss_pred CCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCC
Confidence 9999999999999999999998744348899999999999999999999999999999988764 599885 34
Q ss_pred HHHHHHHHhhh
Q 037410 147 TFILLSLTRYS 157 (161)
Q Consensus 147 ~~~~~~l~~~~ 157 (161)
..+.+.|.++.
T Consensus 314 ~~iv~~Ll~~G 324 (337)
T 4g8k_A 314 HSLVKVLLSHG 324 (337)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHCc
Confidence 56777776653
No 97
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=2.4e-22 Score=138.34 Aligned_cols=127 Identities=16% Similarity=0.032 Sum_probs=109.6
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc---CcHHHHHHHHHcCCC
Q 037410 19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH---GNVHVVKILTKQGPD 95 (161)
Q Consensus 19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~---~~~~~~~~L~~~g~~ 95 (161)
..++|+.|+..|+.+.+..+++.|.+.+... .++..+..|.||||+|+.. ++.+++++|++.|++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~------------~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~ 197 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKI------------PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN 197 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBC------------CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhc------------cccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC
Confidence 4578999999999999999999988754311 0223477899999999999 899999999999998
Q ss_pred CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhhhC
Q 037410 96 NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRYSG 158 (161)
Q Consensus 96 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~~~ 158 (161)
++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|+|. ...+.+.|.++..
T Consensus 198 -in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 198 -LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp -TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred -ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 8899999999999999999999999999999999999999999999964 5566677766543
No 98
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=3.5e-23 Score=134.77 Aligned_cols=113 Identities=9% Similarity=0.061 Sum_probs=98.8
Q ss_pred hHHHhCCccccccCCCCCcHHHHHHHhCC------HHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCc-cHHH
Q 037410 3 EILELCPSLLLNVNAKGDTPLRVAAKFGH------SDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKN-TALH 75 (161)
Q Consensus 3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~------~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-t~l~ 75 (161)
++|...+++++.+|..|+||||+|+..|+ .+++++|+++|++++. +|..|. ||||
T Consensus 59 ~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~------------------~d~~g~ttpLh 120 (186)
T 3t8k_A 59 MFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITA------------------LYKPYKIVVFK 120 (186)
T ss_dssp HHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS------------------CBGGGTBCTTG
T ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc------------------cCCCcCchHHH
Confidence 35557789999999999999999999987 6889999999999665 788999 9999
Q ss_pred HHHhcC-----cHHHHHHHHH-cCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCC
Q 037410 76 EAVCHG-----NVHVVKILTK-QGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKA 134 (161)
Q Consensus 76 ~a~~~~-----~~~~~~~L~~-~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 134 (161)
+|+..+ ..+++++|++ .|++ ++.+|..|.||||+|++.++.+++++|.+.....+.++
T Consensus 121 ~A~~~~~~~~~~~~iv~~Ll~~~gad-~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 121 NIFNYFVDENEMIPLYKLIFSQSGLQ-LLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp GGGGCCSCHHHHHHHHHHHHTSTTCC-TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred HHHHcCCChhhHHHHHHHHHHhcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 999844 4679999999 8988 89999999999999999999999999998775555544
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=3.1e-23 Score=138.25 Aligned_cols=116 Identities=23% Similarity=0.232 Sum_probs=91.0
Q ss_pred hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHh-hHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQT-AKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
.|+ ..+..++.+|..|+||||+||..|+.+++++|++. |.+++. ++..|.||||+|+..|
T Consensus 91 ~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~------------------~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 91 ECL-DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ------------------QNKLGDTALHAAAWKG 151 (222)
T ss_dssp HHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC------------------CCTTSCCHHHHHHHHT
T ss_pred HHH-hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc------------------cCCCCCCHHHHHHHcC
Confidence 444 46788999999999999999999999999999998 777554 7889999999999999
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCccc
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTER 138 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~ 138 (161)
+.+++++|++.|++ ++.++..|.|||++|+..++.++++.|++.|+.....+..++
T Consensus 152 ~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 152 YADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp CHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 99999999999998 889999999999999999999999999999998887776654
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=3.8e-22 Score=142.02 Aligned_cols=120 Identities=18% Similarity=0.178 Sum_probs=95.8
Q ss_pred HhCCccccccC--CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcH
Q 037410 6 ELCPSLLLNVN--AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV 83 (161)
Q Consensus 6 ~~~~~~~~~~~--~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~ 83 (161)
...+++++..+ ..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.
T Consensus 220 L~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~------------------~d~~G~TpLh~A~~~g~~ 281 (368)
T 3jue_A 220 LAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ------------------ADSAGRGPLHHATILGHT 281 (368)
T ss_dssp HHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCH
T ss_pred HHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCcH
Confidence 35678888888 8899999999999999999999999988654 788999999999999999
Q ss_pred HHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC---CCCCCCCCcccchHHHH
Q 037410 84 HVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA---HQCPMKAPTERQLCMLQ 144 (161)
Q Consensus 84 ~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~~~t~l~~~ 144 (161)
+++++|++.|++ ++..|..|.||||+|+..++.+++++|++++ .+....+..+.|++++.
T Consensus 282 ~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~ 344 (368)
T 3jue_A 282 GLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIF 344 (368)
T ss_dssp HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------
T ss_pred HHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHH
Confidence 999999999998 8899999999999999999999999999876 44456667788888763
No 101
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=6e-22 Score=146.29 Aligned_cols=125 Identities=14% Similarity=-0.029 Sum_probs=107.5
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHh---cCcHHHHHHHHHcCCC
Q 037410 19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVC---HGNVHVVKILTKQGPD 95 (161)
Q Consensus 19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~---~~~~~~~~~L~~~g~~ 95 (161)
..+.||.|+..|+.+.++.|++.|.+++.... ....+..|.||||+|+. .|+.+++++|++.|++
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~------------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~ 199 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLP------------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH 199 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBC------------CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCC------------CcccccccchHHHHHHHhcccccHHHHHHHHHcCCC
Confidence 44789999999999999999999988665210 01137789999999965 8999999999999998
Q ss_pred CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410 96 NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY 156 (161)
Q Consensus 96 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~ 156 (161)
++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|. ...+...|..+
T Consensus 200 -vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 262 (497)
T 3lvq_E 200 -LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA 262 (497)
T ss_dssp -TTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred -CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999964 35566666554
No 102
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=3.9e-22 Score=137.19 Aligned_cols=101 Identities=23% Similarity=0.266 Sum_probs=89.7
Q ss_pred CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHH
Q 037410 8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVK 87 (161)
Q Consensus 8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 87 (161)
.+...+..|..|+||||+|+..|+.+++++|++.|++++. +|..|.||||+|+..|+.++++
T Consensus 172 ~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~------------------~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 172 LGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNV------------------QDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp HSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHH
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC------------------CCCCCCCHHHHHHHCCCHHHHH
Confidence 3456666777888999999999999999999988887554 7889999999999999999999
Q ss_pred HHHH-cCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC
Q 037410 88 ILTK-QGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA 127 (161)
Q Consensus 88 ~L~~-~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 127 (161)
+|++ .|++ ++.+|..|.|||++|+..|+.+++++|++++
T Consensus 234 ~Ll~~~gad-~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 234 LLLAVPSCD-ISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHTSTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCCCC-CcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999 7877 8899999999999999999999999999875
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=1.4e-21 Score=135.90 Aligned_cols=124 Identities=15% Similarity=-0.036 Sum_probs=105.4
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc---CcHHHHHHHHHcCCC
Q 037410 19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH---GNVHVVKILTKQGPD 95 (161)
Q Consensus 19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~---~~~~~~~~L~~~g~~ 95 (161)
+.++|+.|+..|+.+.++.|++.|.+++.... ....+..|.||||+|+.. ++.+++++|++.|++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~------------~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad 218 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLP------------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH 218 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEE------------CSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCC------------CcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC
Confidence 55789999999999999999999887654100 001477899999999987 899999999999998
Q ss_pred CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHh
Q 037410 96 NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLTR 155 (161)
Q Consensus 96 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~ 155 (161)
++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|.. ..+...|..
T Consensus 219 -vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~ 280 (301)
T 2b0o_E 219 -LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQ 280 (301)
T ss_dssp -TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred -CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999654 344555444
No 104
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.87 E-value=3.5e-22 Score=119.50 Aligned_cols=97 Identities=23% Similarity=0.308 Sum_probs=81.5
Q ss_pred CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHH
Q 037410 8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVK 87 (161)
Q Consensus 8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 87 (161)
.+......|.+|+||||+|+..|+.+++++|++.|.+++. ++..|.||||+|+..|+.++++
T Consensus 13 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~------------------~d~~g~tpLh~A~~~~~~~~v~ 74 (110)
T 2zgd_A 13 LVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAA------------------KDKNGSTPLHLAARNGHLEVVK 74 (110)
T ss_dssp ---------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHH
T ss_pred CCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHH
Confidence 3456677888999999999999999999999999887554 6889999999999999999999
Q ss_pred HHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHH
Q 037410 88 ILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL 123 (161)
Q Consensus 88 ~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L 123 (161)
+|++.|++ ++.++..|.||||+|+..++.+++++|
T Consensus 75 ~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 75 LLLEAGAD-VXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcCCC-ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 99999988 888999999999999999999999876
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=1.2e-21 Score=127.04 Aligned_cols=111 Identities=23% Similarity=0.197 Sum_probs=94.1
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc-CCCccHHHHHHhc
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN-NEKNTALHEAVCH 80 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~ 80 (161)
+.+++ +.+++.+|..|+||||+|+..|+.+++++|++.|++++. .+ ..|.||||+|+..
T Consensus 61 ~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 61 SQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH------------------RDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCSSSSCCHHHHHHHT
T ss_pred HHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------CCCCCCCCHHHHHHhc
Confidence 34555 778999999999999999999999999999999988665 45 8899999999999
Q ss_pred CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHH
Q 037410 81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFIL 150 (161)
Q Consensus 81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~ 150 (161)
|+.+++++|++.|++ ++.+|..|.||||+|++.++. ..+.++++++......
T Consensus 121 ~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~ 172 (183)
T 3deo_A 121 VRPEVVEALVELGAD-IEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLE 172 (183)
T ss_dssp TCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHH
Confidence 999999999999998 889999999999999875322 3457888886554433
No 106
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=4.7e-22 Score=134.51 Aligned_cols=91 Identities=27% Similarity=0.298 Sum_probs=82.1
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc-CCCccHHHHHHhc
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN-NEKNTALHEAVCH 80 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~ 80 (161)
+.+++ +.+++.+|..|+||||+|+..|+.+++++|+++|++++. .+ ..|.||||+|+..
T Consensus 62 ~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------------------~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 62 SQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH------------------RDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCSSSCCCHHHHHHHT
T ss_pred HHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc------------------CCCCCCCCHHHHHHHc
Confidence 34454 778899999999999999999999999999999988665 45 7899999999999
Q ss_pred CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHh
Q 037410 81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK 113 (161)
Q Consensus 81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~ 113 (161)
|+.+++++|++.|++ ++.++..|.||||+|+.
T Consensus 122 g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 122 VRPEVVEALVELGAD-IEVEDERGLTALELARE 153 (244)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHH
Confidence 999999999999998 88999999999999984
No 107
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=5.1e-22 Score=120.91 Aligned_cols=92 Identities=23% Similarity=0.274 Sum_probs=82.6
Q ss_pred hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410 2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG 81 (161)
Q Consensus 2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 81 (161)
+.++ ..+..++.+|..|+||||+|+..|+.+++++|++.|.+++. ++..|.||||+|+..+
T Consensus 24 ~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 24 KDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA------------------PDKHHITPLLSAVYEG 84 (123)
T ss_dssp HHHH-HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC------------------CCTTSCCHHHHHHHHT
T ss_pred HHHH-HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc------------------CCCCCCCHHHHHHHcC
Confidence 3444 45678899999999999999999999999999999988554 7889999999999999
Q ss_pred cHHHHHHHHHcCCCCccccCCCCCcHHHHHHh
Q 037410 82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAK 113 (161)
Q Consensus 82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~ 113 (161)
+.+++++|++.|++ ++.++..|.||+++|..
T Consensus 85 ~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 85 HVSCVKLLLSKGAD-KTVKGPDGLTAFEATDN 115 (123)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCC
T ss_pred CHHHHHHHHHcCCC-CCCcCCCCCCHHHHhCC
Confidence 99999999999998 88999999999999944
No 108
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=1.5e-22 Score=125.40 Aligned_cols=104 Identities=23% Similarity=0.333 Sum_probs=91.0
Q ss_pred HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410 5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH 84 (161)
Q Consensus 5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 84 (161)
|...+..++.+|..|+||||+|+..|+.+++++|++.|.+++. ++..|.||||+|+..++.+
T Consensus 29 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~ 90 (137)
T 3c5r_A 29 LLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT------------------TGYQNDSPLHDAAKNGHVD 90 (137)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCGGGCCHHHHHHHTTCHH
T ss_pred HHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC------------------cCCCCCCHHHHHHHcCCHH
Confidence 3456788899999999999999999999999999999887554 7888999999999999999
Q ss_pred HHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC
Q 037410 85 VVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA 127 (161)
Q Consensus 85 ~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 127 (161)
++++|++.|++ ++.++..|.||+++|+..+..+++++|.+.+
T Consensus 91 ~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 91 IVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 99999999998 8899999999999999988888887776654
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.9e-20 Score=108.54 Aligned_cols=86 Identities=30% Similarity=0.361 Sum_probs=76.4
Q ss_pred CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---
Q 037410 69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ--- 145 (161)
Q Consensus 69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~--- 145 (161)
+|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 478999999999999999999999998 8899999999999999999999999999999999999999999999964
Q ss_pred hHHHHHHHHh
Q 037410 146 CTFILLSLTR 155 (161)
Q Consensus 146 ~~~~~~~l~~ 155 (161)
...+.+.|.+
T Consensus 80 ~~~~~~~Ll~ 89 (93)
T 1n0q_A 80 HLEVVKLLLE 89 (93)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 3445555544
No 110
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.83 E-value=6.3e-21 Score=134.05 Aligned_cols=136 Identities=16% Similarity=0.133 Sum_probs=108.1
Q ss_pred HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCC--------------CCCc-------cc-----
Q 037410 4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGE--------------PESG-------IG----- 57 (161)
Q Consensus 4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~--------------~~~~-------~~----- 57 (161)
+|...++.++.+|..|.|+++ |+.+++++|+++|.+++..... .... ..
T Consensus 37 ~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 111 (327)
T 1sw6_A 37 DFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQE 111 (327)
T ss_dssp STTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHH
T ss_pred HHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHH
Confidence 455678899999999999987 8999999999999876552110 0000 00
Q ss_pred ------hhhhhhhh-hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCC---hHHHHHHHhcC
Q 037410 58 ------ADRQMIRM-ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY---SEMVIELLETA 127 (161)
Q Consensus 58 ------~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~---~~~~~~Ll~~g 127 (161)
.....++. .+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+ .++++.|++++
T Consensus 112 ~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~ 190 (327)
T 1sw6_A 112 VNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL 190 (327)
T ss_dssp HHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHH
T ss_pred HHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhh
Confidence 01123455 788999999999999999999999999998 88999999999999999998 78888888887
Q ss_pred -CCCCCCCCcccchHHHHH
Q 037410 128 -HQCPMKAPTERQLCMLQQ 145 (161)
Q Consensus 128 -~~~~~~~~~~~t~l~~~~ 145 (161)
++++.+|..|+||||++.
T Consensus 191 ~~~~~~~d~~g~tpLh~A~ 209 (327)
T 1sw6_A 191 YPCLILEDSMNRTILHHII 209 (327)
T ss_dssp GGGGGEECTTCCCHHHHHH
T ss_pred hccccCCCCCCCCHHHHHH
Confidence 789999999999999965
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.82 E-value=9.9e-22 Score=140.31 Aligned_cols=115 Identities=17% Similarity=0.135 Sum_probs=90.9
Q ss_pred cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCC
Q 037410 15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGP 94 (161)
Q Consensus 15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~ 94 (161)
.+.+++||||+|++.|+.+++++|++.|..... .+..+..|.||||+|+..|+.+++++|++.|+
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~---------------~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~ga 152 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEI---------------VKVIQAENYQAFRLAAENGHLHVLNRLCELAP 152 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSS---------------CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCT
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHH---------------HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 455678999999999999999999999873211 11234567789999999999999999999996
Q ss_pred CC--ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCC--CCCcccchHHHHH
Q 037410 95 DN--PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPM--KAPTERQLCMLQQ 145 (161)
Q Consensus 95 ~~--~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~~~t~l~~~~ 145 (161)
+. .+..+.+ .||||+|+..|+.+++++|+++|++++. .|..|+||||+|.
T Consensus 153 d~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa 206 (376)
T 2aja_A 153 TEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAA 206 (376)
T ss_dssp TTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHH
T ss_pred CccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHH
Confidence 41 0122223 8999999999999999999999999887 8889999999976
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.80 E-value=2.5e-21 Score=138.22 Aligned_cols=107 Identities=18% Similarity=0.174 Sum_probs=88.5
Q ss_pred ccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcC
Q 037410 14 NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQG 93 (161)
Q Consensus 14 ~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g 93 (161)
..+..|.||||+||..|+.+++++|+++|++... .+..+.. .||||+|+..|+.+++++|++.|
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~---------------~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~g 186 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM---------------AMIQAEN-YHAFRLAAENGHLHVLNRLCELA 186 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH---------------HHHSHHH-HHHHHHHHHTTCHHHHHHHHHSC
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc---------------cccCCCC-CCHHHHHHHCCCHHHHHHHHHcC
Confidence 4456788999999999999999999999964211 1111222 89999999999999999999999
Q ss_pred CCCccc--cCCCCCcHHHHHH-hCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410 94 PDNPYS--ANNYGKTPLYMAA-KGRYSEMVIELLETAHQCPMKAPTERQLCMLQ 144 (161)
Q Consensus 94 ~~~~~~--~~~~~~t~l~~A~-~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~ 144 (161)
++ ++. .+..|.||||+|+ ..|+.+++++|+++|+ .++||+++|
T Consensus 187 a~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~A 232 (376)
T 2aja_A 187 PT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHE 232 (376)
T ss_dssp GG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCT
T ss_pred Cc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHH
Confidence 87 555 7888999999999 9999999999999874 389999874
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=5.8e-19 Score=105.37 Aligned_cols=86 Identities=23% Similarity=0.210 Sum_probs=76.3
Q ss_pred hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHH
Q 037410 63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCM 142 (161)
Q Consensus 63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 142 (161)
....+..|.|+||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+||+|
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 445688999999999999999999999999988 8889999999999999999999999999999999999999999999
Q ss_pred HHHhHHH
Q 037410 143 LQQCTFI 149 (161)
Q Consensus 143 ~~~~~~~ 149 (161)
+|.....
T Consensus 96 ~A~~~~~ 102 (110)
T 2zgd_A 96 ISIDNGN 102 (110)
T ss_dssp HHHHHTC
T ss_pred HHHHcCC
Confidence 9765443
No 114
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=1.2e-18 Score=104.65 Aligned_cols=90 Identities=28% Similarity=0.311 Sum_probs=80.9
Q ss_pred hhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410 65 MANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ 144 (161)
Q Consensus 65 ~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~ 144 (161)
.+|..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||++++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 3688999999999999999999999999988 888999999999999999999999999999999999999999999996
Q ss_pred Hh---HHHHHHHHh
Q 037410 145 QC---TFILLSLTR 155 (161)
Q Consensus 145 ~~---~~~~~~l~~ 155 (161)
.. ..+.+.|.+
T Consensus 83 ~~~~~~~~~~~Ll~ 96 (115)
T 2l6b_A 83 KKNGHHEIVKLLDA 96 (115)
T ss_dssp HTTTCHHHHHHHHT
T ss_pred HHCCCHHHHHHHHH
Confidence 54 445555544
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=49.83 E-value=17 Score=16.55 Aligned_cols=20 Identities=20% Similarity=0.190 Sum_probs=16.0
Q ss_pred HHHHHHHhCCHHHHHHHHHh
Q 037410 22 PLRVAAKFGHSDIVSVLVQT 41 (161)
Q Consensus 22 ~lh~A~~~g~~~~v~~Ll~~ 41 (161)
-+..||+.|+.+.++.|-..
T Consensus 16 qiyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHH
Confidence 36789999999998877654
No 116
>2cmy_B Beta trypsin, veronica hederifolia trypsin inhibitor; acyl-enzyme intermediate, serine protease inhibitor, zymogen protease, digestion; 2.25A {Veronica hederifolia} SCOP: g.2.4.1
Probab=48.10 E-value=7.3 Score=16.40 Aligned_cols=29 Identities=3% Similarity=0.131 Sum_probs=17.4
Q ss_pred cCCCCCcHHHHHHHhCCHHHHHHHHHhhH
Q 037410 15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAK 43 (161)
Q Consensus 15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~ 43 (161)
.|......+.||-+..+.+++...+++..
T Consensus 2 tdpeqckvmcyaqrhsspellrrcldnce 30 (34)
T 2cmy_B 2 TDPEQCKVMCYAQRHSSPELLRRCLDNCE 30 (34)
T ss_dssp -----CHHHHHHBC--CCHHHHHHHHHC-
T ss_pred CChHHhhHHHHHhhcCCHHHHHHHHHhhh
Confidence 34556677888888889999888887653
No 117
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=33.24 E-value=28 Score=13.67 Aligned_cols=21 Identities=5% Similarity=0.167 Sum_probs=15.6
Q ss_pred HHHHHHHhCCHHHHHHHHHhh
Q 037410 22 PLRVAAKFGHSDIVSVLVQTA 42 (161)
Q Consensus 22 ~lh~A~~~g~~~~v~~Ll~~~ 42 (161)
.+.||-++.+.+++...+++.
T Consensus 4 vmcyaqrhsspellrrcldnc 24 (26)
T 2plx_B 4 VMCYAQRHSSPELLRRCLDNC 24 (26)
T ss_dssp HHHHHBCCCCHHHHHHHHHHH
T ss_pred EEeehhhcCCHHHHHHHHhcc
Confidence 356777788888888877654
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=29.67 E-value=59 Score=23.74 Aligned_cols=27 Identities=22% Similarity=0.450 Sum_probs=23.5
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhhH
Q 037410 17 AKGDTPLRVAAKFGHSDIVSVLVQTAK 43 (161)
Q Consensus 17 ~~g~t~lh~A~~~g~~~~v~~Ll~~~~ 43 (161)
.-|.|.+|+|+++.+.+++..|+..+.
T Consensus 67 ~~g~tlvhlair~~r~~~l~~ll~~~s 93 (454)
T 3zrh_A 67 DVGYTLVHLAIRFQRQDMLAILLTEVS 93 (454)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccCchhhhhhhhhhhhhHHHHhhhccC
Confidence 349999999999999999999998543
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=23.93 E-value=2.2e+02 Score=20.92 Aligned_cols=46 Identities=20% Similarity=0.262 Sum_probs=33.8
Q ss_pred hcCcHHHHHHHHHcCCCCcccc--------------CCCCCcHHHHHHhCCChHHHHHHHh
Q 037410 79 CHGNVHVVKILTKQGPDNPYSA--------------NNYGKTPLYMAAKGRYSEMVIELLE 125 (161)
Q Consensus 79 ~~~~~~~~~~L~~~g~~~~~~~--------------~~~~~t~l~~A~~~~~~~~~~~Ll~ 125 (161)
.-|+...++..+..|++ +..+ -.-|.|.+|+|++..+.+++..|+.
T Consensus 31 ~e~~~~~ve~y~~~gg~-~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 31 VEGDLAAIEAYKSSGGD-IARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHTCHHHHHHHHTTTCC-TTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCChhHHHHHHhcCCc-hhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 44677777777777665 2111 1258899999999999999999986
Done!